Multiple sequence alignment - TraesCS6B01G467500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G467500 chr6B 100.000 6381 0 0 1 6381 717412637 717406257 0.000000e+00 11784.0
1 TraesCS6B01G467500 chr6B 76.674 433 73 17 1455 1873 717419376 717418958 1.390000e-51 215.0
2 TraesCS6B01G467500 chr6B 90.566 159 15 0 1011 1169 717143097 717142939 1.800000e-50 211.0
3 TraesCS6B01G467500 chr6B 82.828 99 15 2 1915 2012 717141473 717141376 3.170000e-13 87.9
4 TraesCS6B01G467500 chr6B 85.185 54 5 3 2157 2209 713473754 713473703 1.200000e-02 52.8
5 TraesCS6B01G467500 chr6D 86.526 3874 364 70 2610 6378 472490991 472487171 0.000000e+00 4117.0
6 TraesCS6B01G467500 chr6D 83.877 1104 111 44 842 1913 472492070 472491002 0.000000e+00 990.0
7 TraesCS6B01G467500 chr6D 90.566 159 15 0 1011 1169 472430057 472429899 1.800000e-50 211.0
8 TraesCS6B01G467500 chr6D 88.679 159 18 0 1011 1169 472502255 472502097 1.820000e-45 195.0
9 TraesCS6B01G467500 chr6D 81.356 236 42 2 4633 4868 472425279 472425046 2.350000e-44 191.0
10 TraesCS6B01G467500 chr6D 81.124 249 30 12 1455 1693 472428963 472428722 3.930000e-42 183.0
11 TraesCS6B01G467500 chr6A 87.586 3472 310 70 2610 6011 617342363 617345783 0.000000e+00 3912.0
12 TraesCS6B01G467500 chr6A 84.283 1597 183 26 4164 5712 617249652 617251228 0.000000e+00 1496.0
13 TraesCS6B01G467500 chr6A 83.564 1156 123 43 793 1910 617341223 617342349 0.000000e+00 1020.0
14 TraesCS6B01G467500 chr6A 83.673 980 115 27 2506 3464 617247889 617248844 0.000000e+00 881.0
15 TraesCS6B01G467500 chr6A 90.637 534 44 4 5 535 617339542 617340072 0.000000e+00 704.0
16 TraesCS6B01G467500 chr6A 81.273 817 98 33 1469 2267 617247114 617247893 1.520000e-170 610.0
17 TraesCS6B01G467500 chr6A 83.077 520 70 12 26 532 617243211 617243725 2.100000e-124 457.0
18 TraesCS6B01G467500 chr6A 82.726 521 68 16 28 535 617363994 617364505 1.630000e-120 444.0
19 TraesCS6B01G467500 chr6A 77.551 735 134 20 4246 4972 617239344 617240055 1.280000e-111 414.0
20 TraesCS6B01G467500 chr6A 84.694 392 52 4 3628 4012 617403938 617404328 1.000000e-102 385.0
21 TraesCS6B01G467500 chr6A 85.675 363 45 5 2964 3321 617403235 617403595 6.040000e-100 375.0
22 TraesCS6B01G467500 chr6A 77.393 606 109 13 2874 3476 617224615 617225195 1.030000e-87 335.0
23 TraesCS6B01G467500 chr6A 88.364 275 29 3 6083 6354 617345815 617346089 1.720000e-85 327.0
24 TraesCS6B01G467500 chr6A 81.340 418 57 11 4011 4428 617404356 617404752 2.870000e-83 320.0
25 TraesCS6B01G467500 chr6A 81.454 399 43 16 1011 1385 617246677 617247068 1.340000e-76 298.0
26 TraesCS6B01G467500 chr6A 78.293 410 61 15 1455 1850 617319261 617319656 8.270000e-59 239.0
27 TraesCS6B01G467500 chr6A 89.937 159 16 0 1011 1169 617217564 617217722 8.390000e-49 206.0
28 TraesCS6B01G467500 chr6A 89.937 159 16 0 1011 1169 617318264 617318422 8.390000e-49 206.0
29 TraesCS6B01G467500 chr6A 89.308 159 17 0 1011 1169 617552444 617552602 3.900000e-47 200.0
30 TraesCS6B01G467500 chr6A 81.928 249 28 12 1455 1693 617553544 617553785 1.820000e-45 195.0
31 TraesCS6B01G467500 chr6A 79.121 273 51 6 4633 4905 617557567 617557833 3.930000e-42 183.0
32 TraesCS6B01G467500 chr6A 87.826 115 13 1 3627 3741 617249082 617249195 4.010000e-27 134.0
33 TraesCS6B01G467500 chr6A 76.995 213 42 7 5828 6037 617213932 617214140 1.450000e-21 115.0
34 TraesCS6B01G467500 chr1A 87.713 2401 175 38 4014 6380 2663531 2661217 0.000000e+00 2689.0
35 TraesCS6B01G467500 chr1A 87.333 2392 231 36 4022 6378 2633694 2631340 0.000000e+00 2673.0
36 TraesCS6B01G467500 chr1A 90.957 1714 117 19 2330 4012 2665268 2663562 0.000000e+00 2272.0
37 TraesCS6B01G467500 chr1A 87.039 1520 133 40 842 2323 2667070 2665577 0.000000e+00 1657.0
38 TraesCS6B01G467500 chr1A 90.654 535 45 5 5 535 2636737 2636204 0.000000e+00 706.0
39 TraesCS6B01G467500 chr1A 86.860 586 45 14 2610 3190 2634265 2633707 1.510000e-175 627.0
40 TraesCS6B01G467500 chr1A 90.200 449 41 3 54 500 2681844 2681397 3.320000e-162 582.0
41 TraesCS6B01G467500 chr1A 85.455 385 41 10 1534 1913 2634650 2634276 2.790000e-103 387.0
42 TraesCS6B01G467500 chr1A 82.591 247 32 8 1455 1693 2842727 2842484 2.330000e-49 207.0
43 TraesCS6B01G467500 chr1A 78.947 266 51 5 4633 4898 2838981 2838721 6.580000e-40 176.0
44 TraesCS6B01G467500 chr1A 83.784 185 13 9 1313 1497 2634823 2634656 6.620000e-35 159.0
45 TraesCS6B01G467500 chr1A 94.872 39 1 1 5 42 2681867 2681829 6.910000e-05 60.2
46 TraesCS6B01G467500 chr7B 82.532 395 52 10 3630 4016 158172070 158172455 1.330000e-86 331.0
47 TraesCS6B01G467500 chr7B 83.429 350 52 6 4231 4578 158172685 158173030 2.870000e-83 320.0
48 TraesCS6B01G467500 chr7B 91.579 95 8 0 2088 2182 533775229 533775323 1.440000e-26 132.0
49 TraesCS6B01G467500 chr7D 83.807 352 50 7 4231 4579 194247650 194247997 1.720000e-85 327.0
50 TraesCS6B01G467500 chr7D 82.097 391 53 10 3634 4016 194247031 194247412 1.030000e-82 318.0
51 TraesCS6B01G467500 chr7D 77.238 391 73 13 5135 5515 194248563 194248947 1.390000e-51 215.0
52 TraesCS6B01G467500 chr7D 76.567 367 58 18 1526 1873 194244153 194244510 6.580000e-40 176.0
53 TraesCS6B01G467500 chr7D 72.800 250 50 14 126 360 336468614 336468368 1.150000e-07 69.4
54 TraesCS6B01G467500 chr2A 92.784 97 7 0 2086 2182 364478310 364478406 2.400000e-29 141.0
55 TraesCS6B01G467500 chr7A 91.579 95 8 0 2088 2182 573432704 573432798 1.440000e-26 132.0
56 TraesCS6B01G467500 chr7A 86.747 83 11 0 1791 1873 203964540 203964622 6.810000e-15 93.5
57 TraesCS6B01G467500 chr5D 90.722 97 9 0 2087 2183 530605395 530605299 5.190000e-26 130.0
58 TraesCS6B01G467500 chr3B 91.489 94 8 0 2089 2182 704578513 704578420 5.190000e-26 130.0
59 TraesCS6B01G467500 chr3A 90.000 100 9 1 2083 2182 37586301 37586399 1.870000e-25 128.0
60 TraesCS6B01G467500 chr3A 90.000 100 9 1 2083 2182 37626760 37626858 1.870000e-25 128.0
61 TraesCS6B01G467500 chr3A 89.796 98 9 1 2089 2186 102680829 102680733 2.420000e-24 124.0
62 TraesCS6B01G467500 chr5A 74.400 250 44 14 127 360 430836767 430836522 8.810000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G467500 chr6B 717406257 717412637 6380 True 11784.000000 11784 100.000000 1 6381 1 chr6B.!!$R2 6380
1 TraesCS6B01G467500 chr6D 472487171 472492070 4899 True 2553.500000 4117 85.201500 842 6378 2 chr6D.!!$R3 5536
2 TraesCS6B01G467500 chr6A 617339542 617346089 6547 False 1490.750000 3912 87.537750 5 6354 4 chr6A.!!$F6 6349
3 TraesCS6B01G467500 chr6A 617239344 617251228 11884 False 612.857143 1496 82.733857 26 5712 7 chr6A.!!$F4 5686
4 TraesCS6B01G467500 chr6A 617363994 617364505 511 False 444.000000 444 82.726000 28 535 1 chr6A.!!$F2 507
5 TraesCS6B01G467500 chr6A 617403235 617404752 1517 False 360.000000 385 83.903000 2964 4428 3 chr6A.!!$F7 1464
6 TraesCS6B01G467500 chr6A 617224615 617225195 580 False 335.000000 335 77.393000 2874 3476 1 chr6A.!!$F1 602
7 TraesCS6B01G467500 chr6A 617318264 617319656 1392 False 222.500000 239 84.115000 1011 1850 2 chr6A.!!$F5 839
8 TraesCS6B01G467500 chr1A 2661217 2667070 5853 True 2206.000000 2689 88.569667 842 6380 3 chr1A.!!$R2 5538
9 TraesCS6B01G467500 chr1A 2631340 2636737 5397 True 910.400000 2673 86.817200 5 6378 5 chr1A.!!$R1 6373
10 TraesCS6B01G467500 chr7B 158172070 158173030 960 False 325.500000 331 82.980500 3630 4578 2 chr7B.!!$F2 948
11 TraesCS6B01G467500 chr7D 194244153 194248947 4794 False 259.000000 327 79.927250 1526 5515 4 chr7D.!!$F1 3989

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
573 6855 0.458669 GGCGACCATCCTCGAACTTA 59.541 55.0 0.00 0.0 35.58 2.24 F
1417 8000 0.460811 CAGGTGCTGCGCTCTTCATA 60.461 55.0 9.73 0.0 0.00 2.15 F
1771 8935 0.098728 GGCGCGTTACTTGCATGAAT 59.901 50.0 8.43 0.0 0.00 2.57 F
2905 11372 0.436531 CGCTTCTCTTCGCAGTTGAC 59.563 55.0 0.00 0.0 0.00 3.18 F
2987 11455 0.753262 ATCACTATCCACAGCGGGTC 59.247 55.0 0.00 0.0 34.36 4.46 F
4197 12925 0.478072 AGATTTGGTCACAGGGTGCA 59.522 50.0 0.00 0.0 32.98 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1596 8730 0.183492 TGCTTCAAGCTGGACAAGGT 59.817 50.000 11.57 0.00 42.97 3.50 R
2905 11372 0.527817 ATCGAGCCTAGTTTTCGCCG 60.528 55.000 0.00 0.00 34.52 6.46 R
3420 11901 0.588252 CACTCTTTCACAGGCCAACG 59.412 55.000 5.01 0.00 0.00 4.10 R
3823 12486 0.031178 GTCAAAACAGTGCTGCCAGG 59.969 55.000 0.00 0.00 0.00 4.45 R
4752 13534 1.074727 TGGGTTTTGATGGGTCGACAT 59.925 47.619 18.91 2.58 0.00 3.06 R
6077 14941 0.036306 ATTTCACCCAGGTCACGTCC 59.964 55.000 0.00 0.00 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 3894 2.364186 GCAAGGGTGGAATGGGGG 60.364 66.667 0.00 0.00 0.00 5.40
86 3929 2.508716 AGGTCCAATCATCATGAGCAGT 59.491 45.455 0.09 0.00 0.00 4.40
108 3951 3.396560 TGAGGCAAGCTAATCATCATCG 58.603 45.455 0.00 0.00 0.00 3.84
168 4011 3.484407 GCATGATCCTATGAGTGGCTTT 58.516 45.455 0.00 0.00 0.00 3.51
267 4112 8.956426 GGATGGTCAAAAATTGAGTCTAATACA 58.044 33.333 0.00 0.00 41.01 2.29
295 4140 8.332996 AGTTATGACCATTTCAGATATGCATC 57.667 34.615 0.19 0.00 37.77 3.91
337 4182 6.649973 TGGCATGGAAGAAAACACAATTAATG 59.350 34.615 0.00 0.00 0.00 1.90
363 4208 7.442062 GTGACTCCAAATGGAAAATGTTTTCAT 59.558 33.333 17.21 3.84 46.34 2.57
420 4278 1.405463 TCATCTCAATCCGAGGTCGTG 59.595 52.381 0.00 0.00 42.55 4.35
535 4393 3.817238 CCGTAAAATTTGGACGTCAAGG 58.183 45.455 18.91 1.78 36.62 3.61
542 4400 2.741211 GGACGTCAAGGCCGTTCC 60.741 66.667 18.91 0.00 38.99 3.62
543 4401 2.029964 GACGTCAAGGCCGTTCCA 59.970 61.111 11.55 0.00 38.92 3.53
544 4402 2.027625 GACGTCAAGGCCGTTCCAG 61.028 63.158 11.55 0.00 38.92 3.86
553 6835 3.039134 CCGTTCCAGGCCACAAAC 58.961 61.111 5.01 4.71 0.00 2.93
569 6851 2.162338 AAACGGCGACCATCCTCGAA 62.162 55.000 16.62 0.00 35.58 3.71
573 6855 0.458669 GGCGACCATCCTCGAACTTA 59.541 55.000 0.00 0.00 35.58 2.24
594 6944 4.287781 TCGCCGTTCCGAACTGCA 62.288 61.111 22.54 10.59 41.04 4.41
625 6996 4.189580 CGCCGGGGTGGATCCAAT 62.190 66.667 18.20 0.00 42.00 3.16
626 6997 2.203351 GCCGGGGTGGATCCAATC 60.203 66.667 18.20 11.88 42.00 2.67
639 7010 3.490348 GATCCAATCCAACCATAGTGGG 58.510 50.000 0.52 0.00 43.37 4.61
644 7015 1.204146 TCCAACCATAGTGGGAGAGC 58.796 55.000 0.52 0.00 41.58 4.09
677 7048 0.951040 GGGGTCTGAGCAGTGTTTCG 60.951 60.000 9.30 0.00 0.00 3.46
679 7050 1.583054 GGTCTGAGCAGTGTTTCGTT 58.417 50.000 1.28 0.00 0.00 3.85
692 7063 4.857037 AGTGTTTCGTTTCTTTGTCTTTGC 59.143 37.500 0.00 0.00 0.00 3.68
693 7064 4.031314 GTGTTTCGTTTCTTTGTCTTTGCC 59.969 41.667 0.00 0.00 0.00 4.52
694 7065 4.082463 TGTTTCGTTTCTTTGTCTTTGCCT 60.082 37.500 0.00 0.00 0.00 4.75
695 7066 3.691049 TCGTTTCTTTGTCTTTGCCTG 57.309 42.857 0.00 0.00 0.00 4.85
711 7082 3.287222 TGCCTGCCAATATTTGTCCTAC 58.713 45.455 0.00 0.00 0.00 3.18
712 7083 2.623416 GCCTGCCAATATTTGTCCTACC 59.377 50.000 0.00 0.00 0.00 3.18
713 7084 2.878406 CCTGCCAATATTTGTCCTACCG 59.122 50.000 0.00 0.00 0.00 4.02
812 7286 1.601663 GCCGACAGATGGATTCGAGAG 60.602 57.143 0.00 0.00 34.62 3.20
816 7290 1.137872 ACAGATGGATTCGAGAGGCAC 59.862 52.381 0.00 0.00 0.00 5.01
817 7291 0.755686 AGATGGATTCGAGAGGCACC 59.244 55.000 0.00 0.00 0.00 5.01
819 7293 0.982852 ATGGATTCGAGAGGCACCCA 60.983 55.000 0.00 0.00 0.00 4.51
820 7294 1.153349 GGATTCGAGAGGCACCCAC 60.153 63.158 0.00 0.00 0.00 4.61
821 7295 1.519455 GATTCGAGAGGCACCCACG 60.519 63.158 0.00 0.00 0.00 4.94
822 7296 2.907897 GATTCGAGAGGCACCCACGG 62.908 65.000 0.00 0.00 0.00 4.94
823 7297 4.671590 TCGAGAGGCACCCACGGA 62.672 66.667 0.00 0.00 0.00 4.69
860 7334 2.076863 GCACACACAGATCTGGTAACC 58.923 52.381 26.08 6.71 34.19 2.85
909 7400 3.198872 GTTCTCCATCTCCGTCAAATCC 58.801 50.000 0.00 0.00 0.00 3.01
921 7412 2.485426 CGTCAAATCCAATCTGCTGTGT 59.515 45.455 0.00 0.00 0.00 3.72
926 7417 1.608055 TCCAATCTGCTGTGTTGTGG 58.392 50.000 9.31 0.00 0.00 4.17
933 7424 2.158769 TCTGCTGTGTTGTGGTGATCTT 60.159 45.455 0.00 0.00 0.00 2.40
934 7425 3.070878 TCTGCTGTGTTGTGGTGATCTTA 59.929 43.478 0.00 0.00 0.00 2.10
935 7426 4.005650 CTGCTGTGTTGTGGTGATCTTAT 58.994 43.478 0.00 0.00 0.00 1.73
936 7427 4.397420 TGCTGTGTTGTGGTGATCTTATT 58.603 39.130 0.00 0.00 0.00 1.40
937 7428 4.455533 TGCTGTGTTGTGGTGATCTTATTC 59.544 41.667 0.00 0.00 0.00 1.75
938 7429 4.697352 GCTGTGTTGTGGTGATCTTATTCT 59.303 41.667 0.00 0.00 0.00 2.40
939 7430 5.182001 GCTGTGTTGTGGTGATCTTATTCTT 59.818 40.000 0.00 0.00 0.00 2.52
940 7431 6.371548 GCTGTGTTGTGGTGATCTTATTCTTA 59.628 38.462 0.00 0.00 0.00 2.10
941 7432 7.624344 GCTGTGTTGTGGTGATCTTATTCTTAC 60.624 40.741 0.00 0.00 0.00 2.34
942 7433 6.653320 TGTGTTGTGGTGATCTTATTCTTACC 59.347 38.462 0.00 0.00 0.00 2.85
943 7434 6.879458 GTGTTGTGGTGATCTTATTCTTACCT 59.121 38.462 0.00 0.00 0.00 3.08
1033 7542 3.846405 TTCACCCTGGCGGAGGTCT 62.846 63.158 0.00 0.00 40.87 3.85
1085 7594 3.818787 CATGCCCAAGCGTCCTGC 61.819 66.667 0.00 0.00 44.31 4.85
1094 7603 2.268920 GCGTCCTGCCATCCAGAA 59.731 61.111 0.00 0.00 44.64 3.02
1103 7612 1.648467 GCCATCCAGAAACTCACCGC 61.648 60.000 0.00 0.00 0.00 5.68
1107 7616 0.976641 TCCAGAAACTCACCGCTGAT 59.023 50.000 0.00 0.00 0.00 2.90
1188 7724 5.221303 GGTACGTTGCCCAAGATACAGTATA 60.221 44.000 0.00 0.00 0.00 1.47
1210 7746 2.215942 AGCAAGTCCGCCCTATTTTT 57.784 45.000 0.00 0.00 0.00 1.94
1213 7749 2.750712 GCAAGTCCGCCCTATTTTTGTA 59.249 45.455 0.00 0.00 0.00 2.41
1214 7750 3.191791 GCAAGTCCGCCCTATTTTTGTAA 59.808 43.478 0.00 0.00 0.00 2.41
1215 7751 4.142249 GCAAGTCCGCCCTATTTTTGTAAT 60.142 41.667 0.00 0.00 0.00 1.89
1217 7753 5.830000 AGTCCGCCCTATTTTTGTAATTC 57.170 39.130 0.00 0.00 0.00 2.17
1218 7754 5.506708 AGTCCGCCCTATTTTTGTAATTCT 58.493 37.500 0.00 0.00 0.00 2.40
1219 7755 5.357032 AGTCCGCCCTATTTTTGTAATTCTG 59.643 40.000 0.00 0.00 0.00 3.02
1220 7756 5.355910 GTCCGCCCTATTTTTGTAATTCTGA 59.644 40.000 0.00 0.00 0.00 3.27
1366 7923 2.100605 CAGCTTCCTACTGGGTTCAC 57.899 55.000 0.00 0.00 36.25 3.18
1379 7936 1.210722 GGGTTCACTCATCTTCCCCTC 59.789 57.143 0.00 0.00 0.00 4.30
1387 7944 1.081174 TCATCTTCCCCTCCCAACTCT 59.919 52.381 0.00 0.00 0.00 3.24
1417 8000 0.460811 CAGGTGCTGCGCTCTTCATA 60.461 55.000 9.73 0.00 0.00 2.15
1421 8004 0.465287 TGCTGCGCTCTTCATATCCA 59.535 50.000 9.73 0.00 0.00 3.41
1424 8007 2.928757 GCTGCGCTCTTCATATCCATAG 59.071 50.000 9.73 0.00 0.00 2.23
1425 8008 2.928757 CTGCGCTCTTCATATCCATAGC 59.071 50.000 9.73 0.00 0.00 2.97
1426 8009 2.564504 TGCGCTCTTCATATCCATAGCT 59.435 45.455 9.73 0.00 0.00 3.32
1428 8011 3.370366 GCGCTCTTCATATCCATAGCTTG 59.630 47.826 0.00 0.00 0.00 4.01
1429 8012 4.564041 CGCTCTTCATATCCATAGCTTGT 58.436 43.478 0.00 0.00 0.00 3.16
1430 8013 5.714047 CGCTCTTCATATCCATAGCTTGTA 58.286 41.667 0.00 0.00 0.00 2.41
1432 8015 5.580297 GCTCTTCATATCCATAGCTTGTAGC 59.420 44.000 0.00 0.00 42.84 3.58
1448 8401 3.476552 TGTAGCTCCACTTTTGTTGAGG 58.523 45.455 0.00 0.00 41.09 3.86
1460 8593 0.609957 TGTTGAGGATTGCAGGCCAG 60.610 55.000 5.01 0.00 0.00 4.85
1488 8621 7.335422 TGGCACAATGTTATTGTTTCTTGTTTT 59.665 29.630 4.55 0.00 31.92 2.43
1595 8729 3.388350 AGGGAATAGTTCTTCGGATGGTC 59.612 47.826 0.00 0.00 0.00 4.02
1596 8730 3.134081 GGGAATAGTTCTTCGGATGGTCA 59.866 47.826 0.00 0.00 0.00 4.02
1708 8848 3.565063 TGATGTCACATGTGGTCTGTTTG 59.435 43.478 25.16 0.00 0.00 2.93
1748 8888 4.717233 TTTATCATGAATGTGGGTGTGC 57.283 40.909 0.00 0.00 0.00 4.57
1771 8935 0.098728 GGCGCGTTACTTGCATGAAT 59.901 50.000 8.43 0.00 0.00 2.57
1779 8943 5.629020 GCGTTACTTGCATGAATCTTTCAAA 59.371 36.000 6.60 0.00 43.95 2.69
1780 8944 6.143758 GCGTTACTTGCATGAATCTTTCAAAA 59.856 34.615 6.60 0.00 43.95 2.44
1781 8945 7.306515 GCGTTACTTGCATGAATCTTTCAAAAA 60.307 33.333 6.60 0.00 43.95 1.94
1820 8984 7.001674 TGACCATTCTTTGTTGTTACAGGTAT 58.998 34.615 0.00 0.00 35.28 2.73
1891 9055 8.160106 CCAGGTAAATTCATTTCCTAGCTCTAT 58.840 37.037 0.00 0.00 31.05 1.98
1910 9074 6.823689 GCTCTATATTCTTGAAACAGGGAACA 59.176 38.462 0.00 0.00 0.00 3.18
2036 9222 4.225042 TGTGTGATAGATTGCCCTAACACT 59.775 41.667 14.53 0.00 40.71 3.55
2051 9237 3.508845 AACACTTTACAGCAGGGACAT 57.491 42.857 0.00 0.00 0.00 3.06
2207 9395 7.959175 ACTTTGTGTTATAGAAGTCCTGTGTA 58.041 34.615 0.00 0.00 0.00 2.90
2213 9401 6.670464 TGTTATAGAAGTCCTGTGTATTGGGA 59.330 38.462 0.00 0.00 0.00 4.37
2216 9404 5.319043 AGAAGTCCTGTGTATTGGGAAAA 57.681 39.130 0.00 0.00 0.00 2.29
2283 9474 6.827727 AGTACTGATCAGTTAACACAACCTT 58.172 36.000 32.14 6.53 42.54 3.50
2289 9480 8.378172 TGATCAGTTAACACAACCTTAAGAAG 57.622 34.615 8.61 0.00 0.00 2.85
2311 9502 8.145122 AGAAGCTTGTGTATATCCTACTTTAGC 58.855 37.037 2.10 0.00 0.00 3.09
2312 9503 7.604657 AGCTTGTGTATATCCTACTTTAGCT 57.395 36.000 0.00 0.00 0.00 3.32
2314 9505 9.144298 AGCTTGTGTATATCCTACTTTAGCTTA 57.856 33.333 0.00 0.00 30.56 3.09
2315 9506 9.194271 GCTTGTGTATATCCTACTTTAGCTTAC 57.806 37.037 0.00 0.00 0.00 2.34
2321 9512 9.032624 GTATATCCTACTTTAGCTTACATGGGA 57.967 37.037 0.00 0.00 0.00 4.37
2378 9872 2.054021 TCCCACCATCACTCTGTTTCA 58.946 47.619 0.00 0.00 0.00 2.69
2394 9888 5.299028 TCTGTTTCAGCATGTACAACAACAT 59.701 36.000 0.00 0.00 40.75 2.71
2395 9889 5.518812 TGTTTCAGCATGTACAACAACATC 58.481 37.500 0.00 0.00 38.01 3.06
2477 10158 2.177044 GGTTTAAACCGCGAGCCAT 58.823 52.632 21.22 0.00 39.66 4.40
2491 10174 5.399858 CGCGAGCCATAGTACTATTTACAT 58.600 41.667 12.87 0.00 0.00 2.29
2497 10180 9.765795 GAGCCATAGTACTATTTACATTTGAGT 57.234 33.333 12.87 0.00 0.00 3.41
2529 10212 4.130857 TGAAGCGAACCAAACTACAATGA 58.869 39.130 0.00 0.00 0.00 2.57
2530 10213 4.576873 TGAAGCGAACCAAACTACAATGAA 59.423 37.500 0.00 0.00 0.00 2.57
2531 10214 4.749245 AGCGAACCAAACTACAATGAAG 57.251 40.909 0.00 0.00 0.00 3.02
2730 11156 1.664321 CCCGTCGGGTCCTAAGTGAG 61.664 65.000 23.02 0.00 38.25 3.51
2749 11176 1.610522 AGCTGTGATTCTTGTTGTGCC 59.389 47.619 0.00 0.00 0.00 5.01
2790 11222 4.610605 TTCGACTTGAGTATGGGTTGAA 57.389 40.909 0.00 0.00 31.94 2.69
2803 11235 6.879458 AGTATGGGTTGAAAAGAGATGTACAC 59.121 38.462 0.00 0.00 0.00 2.90
2893 11359 2.024176 TAGGGTGATTTGCGCTTCTC 57.976 50.000 9.73 2.63 0.00 2.87
2905 11372 0.436531 CGCTTCTCTTCGCAGTTGAC 59.563 55.000 0.00 0.00 0.00 3.18
2939 11406 6.166984 AGGCTCGATCATTTTCTGAGAATA 57.833 37.500 0.00 0.00 37.28 1.75
2954 11421 7.008440 TCTGAGAATAATATAATGCGCATGC 57.992 36.000 26.09 7.91 43.20 4.06
2974 11442 4.811908 TGCGCTGTAGTGTTTAATCACTA 58.188 39.130 18.34 18.34 45.31 2.74
2987 11455 0.753262 ATCACTATCCACAGCGGGTC 59.247 55.000 0.00 0.00 34.36 4.46
3015 11483 4.079787 ACCTGTCCATTATGCCAACTGTAT 60.080 41.667 0.00 0.00 0.00 2.29
3029 11497 9.638239 ATGCCAACTGTATTTACACTAATTTTG 57.362 29.630 0.00 0.00 31.93 2.44
3070 11540 7.847096 AGTACAAGTTTGGTTTTCTGGATTTT 58.153 30.769 0.00 0.00 0.00 1.82
3205 11678 5.320549 TCAGGTAGTCATCTTAAACGACC 57.679 43.478 0.00 0.44 40.32 4.79
3313 11792 3.158676 AGCCGGTTTATTTTAGCCACAA 58.841 40.909 1.90 0.00 0.00 3.33
3320 11800 8.599774 CCGGTTTATTTTAGCCACAAAATATTG 58.400 33.333 0.00 0.00 39.11 1.90
3355 11836 5.752955 TGGAAGCTGTTACAATTTTGCTTTC 59.247 36.000 9.54 8.44 40.26 2.62
3420 11901 9.415544 TCTACCGTTATTTTCTTTCTGTTACTC 57.584 33.333 0.00 0.00 0.00 2.59
3455 11936 3.096852 AGAGTGTTGGATATGTCGGTCA 58.903 45.455 0.00 0.00 0.00 4.02
3491 12012 1.602311 AGTGCTGAGCCAAACAGAAG 58.398 50.000 0.23 0.00 37.54 2.85
3543 12065 7.510549 TTTGGTCCTTTTTGAAGAGATGTAG 57.489 36.000 0.00 0.00 0.00 2.74
3546 12068 7.741785 TGGTCCTTTTTGAAGAGATGTAGTTA 58.258 34.615 0.00 0.00 0.00 2.24
3598 12120 6.823689 TCAAGGTTCTTCAATTCATAGGCTAC 59.176 38.462 0.00 0.00 0.00 3.58
3606 12128 8.713971 TCTTCAATTCATAGGCTACATTCCTTA 58.286 33.333 0.00 0.00 35.21 2.69
3618 12140 8.107095 AGGCTACATTCCTTATTTGTTTAGACA 58.893 33.333 0.00 0.00 0.00 3.41
3823 12486 1.267806 CTGTGATGCCACTTGGTCAAC 59.732 52.381 0.00 0.00 43.55 3.18
4020 12735 7.826260 TTGTAAAGCTTCTTTTCCAACTTTG 57.174 32.000 0.00 0.00 0.00 2.77
4075 12791 0.735471 TAGTTGCGCACAAACAGCAA 59.265 45.000 11.12 0.00 46.91 3.91
4190 12918 5.152623 CTGAGTAAGGAGATTTGGTCACA 57.847 43.478 0.00 0.00 0.00 3.58
4191 12919 5.152623 TGAGTAAGGAGATTTGGTCACAG 57.847 43.478 0.00 0.00 0.00 3.66
4192 12920 4.020218 TGAGTAAGGAGATTTGGTCACAGG 60.020 45.833 0.00 0.00 0.00 4.00
4193 12921 2.887151 AAGGAGATTTGGTCACAGGG 57.113 50.000 0.00 0.00 0.00 4.45
4197 12925 0.478072 AGATTTGGTCACAGGGTGCA 59.522 50.000 0.00 0.00 32.98 4.57
4226 12954 6.597562 AGTAACATTGTGAACTAAAGTCCCA 58.402 36.000 3.82 0.00 0.00 4.37
4360 13090 9.023962 AGGAATAAACATTTCTGTGCTGAATTA 57.976 29.630 0.00 0.00 35.22 1.40
4368 13098 6.899393 TTTCTGTGCTGAATTAAACAGGAT 57.101 33.333 12.64 0.00 40.34 3.24
4445 13175 3.463329 ACACATGATATAAGGGGTTGCCT 59.537 43.478 0.00 0.00 0.00 4.75
4539 13272 4.398988 CCTGCATGCATTTACTCTGGTTAA 59.601 41.667 22.97 0.00 0.00 2.01
4592 13358 1.684386 CCAGGGTTGTTTGCCTGCAA 61.684 55.000 0.00 0.00 0.00 4.08
4611 13378 8.413229 GCCTGCAAATAGAGTTATATTTTGGAA 58.587 33.333 0.00 0.00 33.98 3.53
4658 13436 0.546122 TACCCGAGCTGCCAAATCAT 59.454 50.000 0.00 0.00 0.00 2.45
4660 13438 1.143684 ACCCGAGCTGCCAAATCATAT 59.856 47.619 0.00 0.00 0.00 1.78
4665 13445 2.740981 GAGCTGCCAAATCATATCTCCG 59.259 50.000 0.00 0.00 0.00 4.63
4741 13523 7.178274 CCTGGACATCAATAGATAAGTAGCTCT 59.822 40.741 0.00 0.00 31.88 4.09
4752 13534 3.689872 AAGTAGCTCTCCATGGTCCTA 57.310 47.619 12.58 5.59 0.00 2.94
4783 13573 5.104109 CCCATCAAAACCCATCCTAGTCTTA 60.104 44.000 0.00 0.00 0.00 2.10
4899 13693 7.082316 TCAAGGAAGATAGATGGGGAAGAATA 58.918 38.462 0.00 0.00 0.00 1.75
4908 13702 3.737559 TGGGGAAGAATAACAGTGCAT 57.262 42.857 0.00 0.00 0.00 3.96
4990 13786 4.606457 AAGCGCAGAGTGATGAATTTAC 57.394 40.909 11.47 0.00 0.00 2.01
5043 13850 7.425224 TGGAAAAGTTGTCCCTTGATTTTTA 57.575 32.000 9.74 0.00 33.89 1.52
5074 13881 1.336887 ACGTGACAGGAGATTGTTCCG 60.337 52.381 1.39 0.00 42.29 4.30
5075 13882 1.336887 CGTGACAGGAGATTGTTCCGT 60.337 52.381 0.00 0.00 42.29 4.69
5113 13920 4.122776 GTCGACCATCTGCTGATGTTAAT 58.877 43.478 26.11 12.69 46.38 1.40
5117 13924 7.598869 GTCGACCATCTGCTGATGTTAATATTA 59.401 37.037 26.11 0.00 46.38 0.98
5192 14032 5.920347 AGAGGATGGATATGAACCCTGATA 58.080 41.667 0.00 0.00 0.00 2.15
5235 14075 1.929494 ACCAAATCAAGGAGGGCCATA 59.071 47.619 6.18 0.00 36.29 2.74
5254 14097 2.110967 CGACATGGCTGCTCCCTTG 61.111 63.158 0.00 7.30 36.42 3.61
5288 14131 3.519107 TGATAGCACCCACAGAGATTCAA 59.481 43.478 0.00 0.00 0.00 2.69
5311 14154 0.108207 CAGATGAGCAGATGGGGGAC 59.892 60.000 0.00 0.00 0.00 4.46
5321 14164 2.105806 GATGGGGGACATCGAGGCTC 62.106 65.000 3.87 3.87 45.87 4.70
5348 14191 5.108517 CAAAAGGTGAAGCTACAAGCAAAA 58.891 37.500 1.22 0.00 45.56 2.44
5445 14292 7.360113 ACAAAAATGTTGGTCTATGAACCTT 57.640 32.000 0.68 0.00 40.20 3.50
5449 14297 7.781324 AAATGTTGGTCTATGAACCTTCAAT 57.219 32.000 0.00 0.00 41.13 2.57
5483 14335 0.319405 GCCCGGTAACTGTAGTGTGT 59.681 55.000 0.00 0.00 0.00 3.72
5500 14352 6.455360 AGTGTGTTGATGTTGACTTGATTT 57.545 33.333 0.00 0.00 0.00 2.17
5681 14540 5.769662 ACCAGAAGATTTCTTGCACATTGTA 59.230 36.000 0.00 0.00 38.11 2.41
5682 14541 6.088824 CCAGAAGATTTCTTGCACATTGTAC 58.911 40.000 0.00 0.00 38.11 2.90
5688 14547 5.422666 TTTCTTGCACATTGTACTCACAG 57.577 39.130 0.00 0.00 35.67 3.66
5750 14609 8.434661 ACATTTACGGTACATAAACTAAACACG 58.565 33.333 0.00 0.00 25.60 4.49
5760 14619 8.161699 ACATAAACTAAACACGAAAGGTTGAT 57.838 30.769 0.00 0.00 0.00 2.57
5849 14713 2.356667 GCTGGGGCTAGGCTGTTT 59.643 61.111 16.80 0.00 35.22 2.83
5879 14743 1.450025 GTGGGCTAGGTGCAGTTAAC 58.550 55.000 0.00 0.00 45.15 2.01
5914 14778 0.179065 CCCCTTCCGGTAAATCGTCC 60.179 60.000 0.00 0.00 0.00 4.79
5938 14802 4.787551 TCCCAATATGGTAAATCGCTTGT 58.212 39.130 0.00 0.00 35.17 3.16
5940 14804 5.067153 TCCCAATATGGTAAATCGCTTGTTG 59.933 40.000 0.00 0.00 35.17 3.33
5982 14846 1.202463 AGTAAGCTCAGCGCCATAGTG 60.202 52.381 2.29 0.00 40.39 2.74
6046 14910 1.140161 CGGCATGCTGGTGAAATGG 59.860 57.895 19.33 0.00 0.00 3.16
6065 14929 1.589716 GCCCAGTGATGAGGCACAAC 61.590 60.000 3.50 0.00 46.34 3.32
6066 14930 0.250858 CCCAGTGATGAGGCACAACA 60.251 55.000 0.00 0.00 41.19 3.33
6068 14932 1.267806 CCAGTGATGAGGCACAACAAC 59.732 52.381 0.00 0.00 41.19 3.32
6069 14933 1.267806 CAGTGATGAGGCACAACAACC 59.732 52.381 0.00 0.00 41.19 3.77
6070 14934 1.143684 AGTGATGAGGCACAACAACCT 59.856 47.619 0.00 0.00 41.19 3.50
6071 14935 2.371841 AGTGATGAGGCACAACAACCTA 59.628 45.455 0.00 0.00 41.19 3.08
6072 14936 2.484264 GTGATGAGGCACAACAACCTAC 59.516 50.000 0.00 0.00 38.63 3.18
6073 14937 2.084546 GATGAGGCACAACAACCTACC 58.915 52.381 0.00 0.00 36.05 3.18
6074 14938 0.250124 TGAGGCACAACAACCTACCG 60.250 55.000 0.00 0.00 36.05 4.02
6075 14939 0.034337 GAGGCACAACAACCTACCGA 59.966 55.000 0.00 0.00 36.05 4.69
6076 14940 0.250166 AGGCACAACAACCTACCGAC 60.250 55.000 0.00 0.00 33.38 4.79
6077 14941 1.562575 GGCACAACAACCTACCGACG 61.563 60.000 0.00 0.00 0.00 5.12
6078 14942 1.562575 GCACAACAACCTACCGACGG 61.563 60.000 13.61 13.61 0.00 4.79
6079 14943 0.032403 CACAACAACCTACCGACGGA 59.968 55.000 23.38 3.17 0.00 4.69
6080 14944 0.032540 ACAACAACCTACCGACGGAC 59.967 55.000 23.38 0.00 0.00 4.79
6081 14945 1.005294 CAACAACCTACCGACGGACG 61.005 60.000 23.38 10.52 42.18 4.79
6146 15011 3.072330 TGTGTTACTTTGATGAGGAGGCA 59.928 43.478 0.00 0.00 0.00 4.75
6218 15083 1.576356 CAATTCTCGTCTAGCTGGCC 58.424 55.000 0.00 0.00 0.00 5.36
6252 15118 3.726607 GCTGATCTGTAGGACAAGATGG 58.273 50.000 1.27 0.00 0.00 3.51
6283 15149 4.717313 GCGCCCGGTTTTCTCCCT 62.717 66.667 0.00 0.00 0.00 4.20
6285 15151 2.332654 CGCCCGGTTTTCTCCCTTG 61.333 63.158 0.00 0.00 0.00 3.61
6301 15167 0.443869 CTTGTCGATGGCAAAGACGG 59.556 55.000 16.99 10.72 37.69 4.79
6320 15187 1.376424 CAGTCCCGCAGCTGTGATT 60.376 57.895 28.54 10.16 0.00 2.57
6339 15206 2.263153 TCGACAAGCGATCTGTCCA 58.737 52.632 7.73 0.00 45.59 4.02
6367 15234 0.543277 AGCTTGCCGGAGATCAATCA 59.457 50.000 5.05 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.540515 CTTGATTGTGGACGATACGCT 58.459 47.619 0.00 0.00 0.00 5.07
1 2 1.593006 CCTTGATTGTGGACGATACGC 59.407 52.381 0.00 0.00 0.00 4.42
2 3 1.593006 GCCTTGATTGTGGACGATACG 59.407 52.381 0.00 0.00 0.00 3.06
4 5 1.837439 AGGCCTTGATTGTGGACGATA 59.163 47.619 0.00 0.00 36.23 2.92
5 6 0.620556 AGGCCTTGATTGTGGACGAT 59.379 50.000 0.00 0.00 36.23 3.73
7 8 1.338674 TGTAGGCCTTGATTGTGGACG 60.339 52.381 12.58 0.00 36.23 4.79
8 9 2.489938 TGTAGGCCTTGATTGTGGAC 57.510 50.000 12.58 0.00 0.00 4.02
51 3894 1.239347 GGACCTTTGCAGACCTTGAC 58.761 55.000 0.00 0.00 0.00 3.18
86 3929 3.811497 CGATGATGATTAGCTTGCCTCAA 59.189 43.478 0.00 0.00 0.00 3.02
108 3951 3.945434 CCGCCATCGCTGATGCAC 61.945 66.667 11.51 6.44 38.59 4.57
267 4112 8.970020 TGCATATCTGAAATGGTCATAACTTTT 58.030 29.630 0.00 0.00 35.07 2.27
295 4140 5.237996 CCATGCCATAATCTAGTGTCAACAG 59.762 44.000 0.00 0.00 0.00 3.16
305 4150 6.889177 TGTGTTTTCTTCCATGCCATAATCTA 59.111 34.615 0.00 0.00 0.00 1.98
337 4182 6.760770 TGAAAACATTTTCCATTTGGAGTCAC 59.239 34.615 13.21 0.00 46.36 3.67
379 4236 6.421377 TGATCCAACATTCATAGTTGTTCG 57.579 37.500 0.00 0.00 43.61 3.95
388 4245 5.472478 CGGATTGAGATGATCCAACATTCAT 59.528 40.000 4.24 0.00 42.63 2.57
420 4278 1.158434 TTTGGCCGGACAATTCGTAC 58.842 50.000 26.67 0.00 0.00 3.67
431 4289 1.263217 GCGATGTACTATTTTGGCCGG 59.737 52.381 0.00 0.00 0.00 6.13
483 4341 0.396811 CCGTCTGGTCCAAACTTCCT 59.603 55.000 0.00 0.00 0.00 3.36
517 4375 2.226912 CGGCCTTGACGTCCAAATTTTA 59.773 45.455 14.12 0.00 33.76 1.52
535 4393 2.909965 TTTGTGGCCTGGAACGGC 60.910 61.111 3.32 0.00 44.73 5.68
537 4395 2.637025 CGTTTGTGGCCTGGAACG 59.363 61.111 18.52 18.52 38.83 3.95
548 6830 1.375523 GAGGATGGTCGCCGTTTGT 60.376 57.895 0.00 0.00 0.00 2.83
553 6835 2.558554 AAGTTCGAGGATGGTCGCCG 62.559 60.000 0.00 0.00 39.90 6.46
587 6869 2.351157 GCTGAAGTGGTGATTGCAGTTC 60.351 50.000 0.00 0.00 0.00 3.01
594 6944 2.034879 CGGCGCTGAAGTGGTGATT 61.035 57.895 11.90 0.00 0.00 2.57
616 6987 6.230750 CCCACTATGGTTGGATTGGATCCA 62.231 50.000 11.44 11.44 46.28 3.41
618 6989 3.138283 TCCCACTATGGTTGGATTGGATC 59.862 47.826 0.00 0.00 35.17 3.36
619 6990 3.130450 TCCCACTATGGTTGGATTGGAT 58.870 45.455 0.00 0.00 35.17 3.41
621 6992 2.509548 TCTCCCACTATGGTTGGATTGG 59.490 50.000 2.27 0.00 36.79 3.16
622 6993 3.813443 CTCTCCCACTATGGTTGGATTG 58.187 50.000 2.27 0.00 36.79 2.67
623 6994 2.173569 GCTCTCCCACTATGGTTGGATT 59.826 50.000 2.27 0.00 36.79 3.01
625 6996 1.204146 GCTCTCCCACTATGGTTGGA 58.796 55.000 1.89 1.89 35.17 3.53
626 6997 0.179073 CGCTCTCCCACTATGGTTGG 60.179 60.000 0.00 0.00 35.17 3.77
627 6998 0.811616 GCGCTCTCCCACTATGGTTG 60.812 60.000 0.00 0.00 35.17 3.77
628 6999 1.522569 GCGCTCTCCCACTATGGTT 59.477 57.895 0.00 0.00 35.17 3.67
629 7000 2.786495 CGCGCTCTCCCACTATGGT 61.786 63.158 5.56 0.00 35.17 3.55
630 7001 2.028190 CGCGCTCTCCCACTATGG 59.972 66.667 5.56 0.00 37.25 2.74
631 7002 1.299468 GACGCGCTCTCCCACTATG 60.299 63.158 5.73 0.00 0.00 2.23
632 7003 2.491022 GGACGCGCTCTCCCACTAT 61.491 63.158 5.73 0.00 0.00 2.12
633 7004 3.138798 GGACGCGCTCTCCCACTA 61.139 66.667 5.73 0.00 0.00 2.74
638 7009 4.539881 GACTCGGACGCGCTCTCC 62.540 72.222 5.73 4.81 0.00 3.71
639 7010 3.443261 GAGACTCGGACGCGCTCTC 62.443 68.421 5.73 5.23 0.00 3.20
640 7011 3.501548 GAGACTCGGACGCGCTCT 61.502 66.667 5.73 0.00 0.00 4.09
641 7012 4.872485 CGAGACTCGGACGCGCTC 62.872 72.222 17.27 2.64 36.00 5.03
664 7035 3.438781 ACAAAGAAACGAAACACTGCTCA 59.561 39.130 0.00 0.00 0.00 4.26
677 7048 2.159114 TGGCAGGCAAAGACAAAGAAAC 60.159 45.455 0.00 0.00 0.00 2.78
679 7050 1.774110 TGGCAGGCAAAGACAAAGAA 58.226 45.000 0.00 0.00 0.00 2.52
692 7063 2.878406 CGGTAGGACAAATATTGGCAGG 59.122 50.000 0.00 0.00 41.76 4.85
693 7064 3.541632 ACGGTAGGACAAATATTGGCAG 58.458 45.455 0.00 0.00 41.76 4.85
694 7065 3.537580 GACGGTAGGACAAATATTGGCA 58.462 45.455 0.00 0.00 41.76 4.92
695 7066 2.876550 GGACGGTAGGACAAATATTGGC 59.123 50.000 0.00 0.00 38.21 4.52
794 7206 1.601663 GCCTCTCGAATCCATCTGTCG 60.602 57.143 0.00 0.00 36.12 4.35
795 7207 1.410517 TGCCTCTCGAATCCATCTGTC 59.589 52.381 0.00 0.00 0.00 3.51
797 7209 1.539929 GGTGCCTCTCGAATCCATCTG 60.540 57.143 0.00 0.00 0.00 2.90
802 7276 1.153349 GTGGGTGCCTCTCGAATCC 60.153 63.158 0.00 0.00 0.00 3.01
812 7286 3.936203 TCTGTGTCCGTGGGTGCC 61.936 66.667 0.00 0.00 0.00 5.01
816 7290 1.300931 CTGTGTCTGTGTCCGTGGG 60.301 63.158 0.00 0.00 0.00 4.61
817 7291 1.300931 CCTGTGTCTGTGTCCGTGG 60.301 63.158 0.00 0.00 0.00 4.94
819 7293 0.755698 ACTCCTGTGTCTGTGTCCGT 60.756 55.000 0.00 0.00 0.00 4.69
820 7294 1.200252 CTACTCCTGTGTCTGTGTCCG 59.800 57.143 0.00 0.00 0.00 4.79
821 7295 1.067495 GCTACTCCTGTGTCTGTGTCC 60.067 57.143 0.00 0.00 0.00 4.02
822 7296 1.613925 TGCTACTCCTGTGTCTGTGTC 59.386 52.381 0.00 0.00 0.00 3.67
823 7297 1.341531 GTGCTACTCCTGTGTCTGTGT 59.658 52.381 0.00 0.00 0.00 3.72
860 7334 1.151908 CGGAGGGAGGGAGGAGTAG 59.848 68.421 0.00 0.00 0.00 2.57
909 7400 1.948834 TCACCACAACACAGCAGATTG 59.051 47.619 0.00 0.00 0.00 2.67
921 7412 7.103641 GTGAGGTAAGAATAAGATCACCACAA 58.896 38.462 0.00 0.00 30.26 3.33
926 7417 6.981559 GTGAGGTGAGGTAAGAATAAGATCAC 59.018 42.308 0.00 0.00 35.88 3.06
933 7424 3.028850 CCGGTGAGGTGAGGTAAGAATA 58.971 50.000 0.00 0.00 34.51 1.75
934 7425 1.831736 CCGGTGAGGTGAGGTAAGAAT 59.168 52.381 0.00 0.00 34.51 2.40
935 7426 1.263356 CCGGTGAGGTGAGGTAAGAA 58.737 55.000 0.00 0.00 34.51 2.52
936 7427 1.255667 GCCGGTGAGGTGAGGTAAGA 61.256 60.000 1.90 0.00 43.70 2.10
937 7428 1.218316 GCCGGTGAGGTGAGGTAAG 59.782 63.158 1.90 0.00 43.70 2.34
938 7429 3.384348 GCCGGTGAGGTGAGGTAA 58.616 61.111 1.90 0.00 43.70 2.85
988 7482 2.108168 TCTCCCCATCGTCCTAACTTG 58.892 52.381 0.00 0.00 0.00 3.16
1033 7542 0.719015 AGGACCTCCTCCATCTTGGA 59.281 55.000 0.00 0.00 44.77 3.53
1085 7594 0.036010 AGCGGTGAGTTTCTGGATGG 60.036 55.000 0.00 0.00 0.00 3.51
1093 7602 2.032030 CGTTGAAATCAGCGGTGAGTTT 60.032 45.455 28.10 22.59 41.01 2.66
1094 7603 1.531149 CGTTGAAATCAGCGGTGAGTT 59.469 47.619 27.87 27.87 43.57 3.01
1103 7612 1.369091 CGGGGAGGCGTTGAAATCAG 61.369 60.000 0.00 0.00 0.00 2.90
1107 7616 3.243053 TCCGGGGAGGCGTTGAAA 61.243 61.111 0.00 0.00 40.77 2.69
1188 7724 0.328258 AATAGGGCGGACTTGCTTGT 59.672 50.000 0.00 0.00 34.52 3.16
1210 7746 3.068165 ACGCCGATCAGATCAGAATTACA 59.932 43.478 11.12 0.00 0.00 2.41
1213 7749 2.748605 GACGCCGATCAGATCAGAATT 58.251 47.619 11.12 0.00 0.00 2.17
1214 7750 1.335415 CGACGCCGATCAGATCAGAAT 60.335 52.381 11.12 0.00 38.22 2.40
1215 7751 0.029433 CGACGCCGATCAGATCAGAA 59.971 55.000 11.12 0.00 38.22 3.02
1217 7753 1.371022 CCGACGCCGATCAGATCAG 60.371 63.158 11.12 0.00 38.22 2.90
1218 7754 2.721859 CCGACGCCGATCAGATCA 59.278 61.111 11.12 0.00 38.22 2.92
1219 7755 2.731348 GCCGACGCCGATCAGATC 60.731 66.667 0.00 0.00 38.22 2.75
1220 7756 4.630785 CGCCGACGCCGATCAGAT 62.631 66.667 0.00 0.00 38.22 2.90
1308 7865 0.674581 CGTGGGCAGCATCTTCTTCA 60.675 55.000 0.00 0.00 0.00 3.02
1366 7923 1.488393 GAGTTGGGAGGGGAAGATGAG 59.512 57.143 0.00 0.00 0.00 2.90
1379 7936 1.630369 TGAGTGGGATTCAGAGTTGGG 59.370 52.381 0.00 0.00 0.00 4.12
1387 7944 0.325933 CAGCACCTGAGTGGGATTCA 59.674 55.000 0.00 0.00 44.69 2.57
1424 8007 3.315191 TCAACAAAAGTGGAGCTACAAGC 59.685 43.478 0.00 0.00 42.84 4.01
1425 8008 4.023707 CCTCAACAAAAGTGGAGCTACAAG 60.024 45.833 0.00 0.00 0.00 3.16
1426 8009 3.882888 CCTCAACAAAAGTGGAGCTACAA 59.117 43.478 0.00 0.00 0.00 2.41
1428 8011 3.740115 TCCTCAACAAAAGTGGAGCTAC 58.260 45.455 0.00 0.00 0.00 3.58
1429 8012 4.640771 ATCCTCAACAAAAGTGGAGCTA 57.359 40.909 0.00 0.00 32.74 3.32
1430 8013 3.515602 ATCCTCAACAAAAGTGGAGCT 57.484 42.857 0.00 0.00 32.74 4.09
1432 8015 3.318839 TGCAATCCTCAACAAAAGTGGAG 59.681 43.478 0.00 0.00 32.74 3.86
1433 8016 3.295093 TGCAATCCTCAACAAAAGTGGA 58.705 40.909 0.00 0.00 33.64 4.02
1435 8018 3.645884 CCTGCAATCCTCAACAAAAGTG 58.354 45.455 0.00 0.00 0.00 3.16
1442 8395 0.322816 TCTGGCCTGCAATCCTCAAC 60.323 55.000 3.32 0.00 0.00 3.18
1460 8593 6.646240 ACAAGAAACAATAACATTGTGCCATC 59.354 34.615 5.36 3.33 32.22 3.51
1510 8643 1.062002 CATGGTATGTGTTCGTTCGGC 59.938 52.381 0.00 0.00 0.00 5.54
1515 8648 5.670485 ACATGATACATGGTATGTGTTCGT 58.330 37.500 14.70 1.45 44.60 3.85
1560 8693 8.050316 AGAACTATTCCCTGATTGGTAATGAT 57.950 34.615 0.00 0.00 0.00 2.45
1595 8729 0.595095 GCTTCAAGCTGGACAAGGTG 59.405 55.000 0.71 0.00 38.45 4.00
1596 8730 0.183492 TGCTTCAAGCTGGACAAGGT 59.817 50.000 11.57 0.00 42.97 3.50
1652 8791 8.876303 AAAGAAGGAAGAGAGCAGAAAATATT 57.124 30.769 0.00 0.00 0.00 1.28
1670 8809 4.202141 TGACATCAAAGGCACAAAAGAAGG 60.202 41.667 0.00 0.00 0.00 3.46
1748 8888 4.439472 GCAAGTAACGCGCCCACG 62.439 66.667 5.73 0.00 44.07 4.94
1756 8920 7.621832 TTTTGAAAGATTCATGCAAGTAACG 57.378 32.000 0.00 0.00 39.84 3.18
1779 8943 7.391620 AGAATGGTCATGCATGAATTTCTTTT 58.608 30.769 30.24 16.11 38.75 2.27
1780 8944 6.942976 AGAATGGTCATGCATGAATTTCTTT 58.057 32.000 30.24 20.73 38.75 2.52
1781 8945 6.540438 AGAATGGTCATGCATGAATTTCTT 57.460 33.333 30.24 18.20 38.75 2.52
1782 8946 6.540438 AAGAATGGTCATGCATGAATTTCT 57.460 33.333 30.24 28.65 38.75 2.52
1783 8947 6.592607 ACAAAGAATGGTCATGCATGAATTTC 59.407 34.615 30.24 27.24 38.75 2.17
1784 8948 6.469410 ACAAAGAATGGTCATGCATGAATTT 58.531 32.000 30.24 21.92 38.75 1.82
1785 8949 6.045072 ACAAAGAATGGTCATGCATGAATT 57.955 33.333 30.24 25.14 38.75 2.17
1786 8950 5.670792 ACAAAGAATGGTCATGCATGAAT 57.329 34.783 30.24 18.49 38.75 2.57
1787 8951 5.221481 ACAACAAAGAATGGTCATGCATGAA 60.221 36.000 30.24 16.96 38.75 2.57
1788 8952 4.281435 ACAACAAAGAATGGTCATGCATGA 59.719 37.500 25.42 25.42 0.00 3.07
1801 8965 8.349245 CAACATCATACCTGTAACAACAAAGAA 58.651 33.333 0.00 0.00 0.00 2.52
2036 9222 4.277476 CCCAATAATGTCCCTGCTGTAAA 58.723 43.478 0.00 0.00 0.00 2.01
2051 9237 6.663953 TGTCGAAAATATTTGGACCCCAATAA 59.336 34.615 21.02 6.43 43.55 1.40
2073 9259 5.477637 GGAGGGAGTATATAAGAGGTGTGTC 59.522 48.000 0.00 0.00 0.00 3.67
2172 9360 7.179076 TCTATAACACAAAGTTACTCCCTCC 57.821 40.000 0.00 0.00 44.95 4.30
2213 9401 6.389869 TGTAGAGAAGGATGGGGTGATATTTT 59.610 38.462 0.00 0.00 0.00 1.82
2216 9404 4.841246 GTGTAGAGAAGGATGGGGTGATAT 59.159 45.833 0.00 0.00 0.00 1.63
2289 9480 9.194271 GTAAGCTAAAGTAGGATATACACAAGC 57.806 37.037 0.00 0.00 0.00 4.01
2311 9502 6.817765 ACATACACAACTTTCCCATGTAAG 57.182 37.500 0.00 0.00 30.06 2.34
2312 9503 7.720074 TGTAACATACACAACTTTCCCATGTAA 59.280 33.333 0.00 0.00 32.89 2.41
2314 9505 6.065374 TGTAACATACACAACTTTCCCATGT 58.935 36.000 0.00 0.00 32.89 3.21
2315 9506 6.567687 TGTAACATACACAACTTTCCCATG 57.432 37.500 0.00 0.00 32.89 3.66
2316 9507 7.001674 TCTTGTAACATACACAACTTTCCCAT 58.998 34.615 0.00 0.00 38.63 4.00
2317 9508 6.358178 TCTTGTAACATACACAACTTTCCCA 58.642 36.000 0.00 0.00 38.63 4.37
2318 9509 6.870971 TCTTGTAACATACACAACTTTCCC 57.129 37.500 0.00 0.00 38.63 3.97
2321 9512 7.817418 ACCATCTTGTAACATACACAACTTT 57.183 32.000 0.00 0.00 38.63 2.66
2359 9853 2.430465 CTGAAACAGAGTGATGGTGGG 58.570 52.381 0.00 0.00 32.44 4.61
2360 9854 1.808945 GCTGAAACAGAGTGATGGTGG 59.191 52.381 2.81 0.00 32.44 4.61
2368 9862 4.450976 TGTTGTACATGCTGAAACAGAGT 58.549 39.130 0.00 1.12 32.44 3.24
2470 10151 8.812147 TCAAATGTAAATAGTACTATGGCTCG 57.188 34.615 16.11 1.74 0.00 5.03
2491 10174 4.038763 TCGCTTCAGTTCCTAGAACTCAAA 59.961 41.667 7.01 4.78 0.00 2.69
2497 10180 2.631062 TGGTTCGCTTCAGTTCCTAGAA 59.369 45.455 0.00 0.00 0.00 2.10
2529 10212 6.713762 TCATCAAACTGACATGAAAACCTT 57.286 33.333 0.00 0.00 0.00 3.50
2530 10213 6.906157 ATCATCAAACTGACATGAAAACCT 57.094 33.333 0.00 0.00 0.00 3.50
2531 10214 7.569957 GCAAATCATCAAACTGACATGAAAACC 60.570 37.037 0.00 0.00 0.00 3.27
2730 11156 1.337703 TGGCACAACAAGAATCACAGC 59.662 47.619 0.00 0.00 31.92 4.40
2803 11235 8.728833 ACAAATCTGCTTCTCTTTATTTCTCTG 58.271 33.333 0.00 0.00 0.00 3.35
2905 11372 0.527817 ATCGAGCCTAGTTTTCGCCG 60.528 55.000 0.00 0.00 34.52 6.46
2949 11416 2.892373 TTAAACACTACAGCGCATGC 57.108 45.000 11.47 7.91 43.24 4.06
2974 11442 1.305802 TAGTGGACCCGCTGTGGAT 60.306 57.895 9.25 0.00 42.00 3.41
2987 11455 2.172505 TGGCATAATGGACAGGTAGTGG 59.827 50.000 0.00 0.00 0.00 4.00
2998 11466 7.333528 AGTGTAAATACAGTTGGCATAATGG 57.666 36.000 0.00 0.00 36.50 3.16
3029 11497 7.085052 ACTTGTACTTCCTGAAACAGAAAAC 57.915 36.000 0.00 0.00 32.44 2.43
3070 11540 0.914644 CATTCTTCCTCCTCAGCCCA 59.085 55.000 0.00 0.00 0.00 5.36
3205 11678 6.031751 ACTTGCTAAGTCAGGTTAAGAGAG 57.968 41.667 0.00 0.00 37.02 3.20
3313 11792 7.668886 CAGCTTCCAGGGATTAGATCAATATTT 59.331 37.037 0.00 0.00 0.00 1.40
3320 11800 4.429854 AACAGCTTCCAGGGATTAGATC 57.570 45.455 0.00 0.00 0.00 2.75
3396 11877 7.867403 ACGAGTAACAGAAAGAAAATAACGGTA 59.133 33.333 0.00 0.00 0.00 4.02
3420 11901 0.588252 CACTCTTTCACAGGCCAACG 59.412 55.000 5.01 0.00 0.00 4.10
3455 11936 2.693069 CACTTTTCGCAGGTGAGATCT 58.307 47.619 0.00 0.00 33.32 2.75
3705 12279 7.564793 TGTCCTATTTACTGCAACTATCATGT 58.435 34.615 0.00 0.00 0.00 3.21
3735 12309 7.608761 TCCCAGGAAACATATGTTGTACTTAAC 59.391 37.037 21.46 6.46 37.68 2.01
3823 12486 0.031178 GTCAAAACAGTGCTGCCAGG 59.969 55.000 0.00 0.00 0.00 4.45
3982 12649 8.579863 AGAAGCTTTACAATGCTCACTTTAATT 58.420 29.630 0.00 0.00 38.31 1.40
3996 12663 7.607250 TCAAAGTTGGAAAAGAAGCTTTACAA 58.393 30.769 0.00 0.00 36.89 2.41
4075 12791 9.624373 AATCTCAACACTCTATTTTATCAGCAT 57.376 29.630 0.00 0.00 0.00 3.79
4180 12908 1.259609 CATGCACCCTGTGACCAAAT 58.740 50.000 0.00 0.00 35.23 2.32
4190 12918 4.458989 CACAATGTTACTTACATGCACCCT 59.541 41.667 0.00 0.00 46.75 4.34
4191 12919 4.457603 TCACAATGTTACTTACATGCACCC 59.542 41.667 0.00 0.00 46.75 4.61
4192 12920 5.621197 TCACAATGTTACTTACATGCACC 57.379 39.130 0.00 0.00 46.75 5.01
4193 12921 6.668323 AGTTCACAATGTTACTTACATGCAC 58.332 36.000 0.00 0.00 46.75 4.57
4360 13090 3.160269 CCTGCTCTTTTCCATCCTGTTT 58.840 45.455 0.00 0.00 0.00 2.83
4368 13098 1.136329 AGAGGGCCTGCTCTTTTCCA 61.136 55.000 12.95 0.00 0.00 3.53
4445 13175 5.525745 TCATAACGAACAAGAAAACTGCAGA 59.474 36.000 23.35 0.00 0.00 4.26
4496 13229 3.877508 AGGCACAACAGTGTTAGAAAGAC 59.122 43.478 8.49 0.00 35.07 3.01
4517 13250 5.565592 TTAACCAGAGTAAATGCATGCAG 57.434 39.130 26.69 11.22 0.00 4.41
4539 13272 2.264005 TCCAAGCACGGTGTAACATT 57.736 45.000 10.24 0.00 39.98 2.71
4611 13378 7.177878 AGTTGTCATCAAGTTCCAGGATAAAT 58.822 34.615 0.00 0.00 33.97 1.40
4660 13438 9.085645 ACTACATATAAAACATATGGACGGAGA 57.914 33.333 7.80 0.00 36.56 3.71
4665 13445 9.569122 ACCCAACTACATATAAAACATATGGAC 57.431 33.333 7.80 0.00 36.56 4.02
4752 13534 1.074727 TGGGTTTTGATGGGTCGACAT 59.925 47.619 18.91 2.58 0.00 3.06
4945 13739 8.789881 TTTCCGTTTTATTTGACTACATGTTG 57.210 30.769 2.30 4.29 0.00 3.33
4947 13741 7.081976 GCTTTCCGTTTTATTTGACTACATGT 58.918 34.615 2.69 2.69 0.00 3.21
5043 13850 7.687941 ATCTCCTGTCACGTGAAAATAAATT 57.312 32.000 21.95 0.00 0.00 1.82
5074 13881 3.607209 GTCGACGACATACTTTCCTCAAC 59.393 47.826 22.66 0.00 32.09 3.18
5075 13882 3.366679 GGTCGACGACATACTTTCCTCAA 60.367 47.826 27.77 0.00 33.68 3.02
5156 13996 1.197721 CATCCTCTTGCGCGACTTTTT 59.802 47.619 12.10 0.00 0.00 1.94
5235 14075 2.596851 AAGGGAGCAGCCATGTCGT 61.597 57.895 0.00 0.00 38.95 4.34
5254 14097 2.746362 GGTGCTATCAGGCATGATAAGC 59.254 50.000 20.51 22.45 45.56 3.09
5288 14131 1.629353 CCCCATCTGCTCATCTGCTAT 59.371 52.381 0.00 0.00 0.00 2.97
5311 14154 1.661341 CTTTTGGAGGAGCCTCGATG 58.339 55.000 10.25 0.00 43.59 3.84
5321 14164 6.106185 GCTTGTAGCTTCACCTTTTGGAGG 62.106 50.000 0.00 0.00 44.23 4.30
5348 14191 4.401022 ACATTCATCTTGTCACCATGTGT 58.599 39.130 0.00 0.00 34.79 3.72
5445 14292 3.117888 GGGCAACTATCCTTCCTCATTGA 60.118 47.826 0.00 0.00 0.00 2.57
5449 14297 0.830648 CGGGCAACTATCCTTCCTCA 59.169 55.000 0.00 0.00 0.00 3.86
5460 14308 1.001633 CACTACAGTTACCGGGCAACT 59.998 52.381 15.77 15.77 36.68 3.16
5483 14335 6.530887 CACAACACAAATCAAGTCAACATCAA 59.469 34.615 0.00 0.00 0.00 2.57
5500 14352 3.351794 TTGGAAGTACACCACAACACA 57.648 42.857 10.60 0.00 37.13 3.72
5558 14410 2.699954 ACGACATGTTCTCCCATGAAC 58.300 47.619 0.00 0.00 43.99 3.18
5559 14411 3.417069 AACGACATGTTCTCCCATGAA 57.583 42.857 0.00 0.00 43.99 2.57
5681 14540 7.851228 TGTACCATAAATGAAGATCTGTGAGT 58.149 34.615 0.00 0.00 0.00 3.41
5682 14541 8.899427 ATGTACCATAAATGAAGATCTGTGAG 57.101 34.615 0.00 0.00 0.00 3.51
5742 14601 7.596749 ATGTAGATCAACCTTTCGTGTTTAG 57.403 36.000 0.00 0.00 0.00 1.85
5750 14609 5.585047 ACCGCTTTATGTAGATCAACCTTTC 59.415 40.000 0.00 0.00 0.00 2.62
5760 14619 4.760878 TGCAACATACCGCTTTATGTAGA 58.239 39.130 7.33 0.00 41.02 2.59
5829 14693 3.554342 CAGCCTAGCCCCAGCGAT 61.554 66.667 0.00 0.00 46.67 4.58
5849 14713 1.408405 CCTAGCCCACGAGTAGTCTCA 60.408 57.143 0.00 0.00 40.44 3.27
5879 14743 0.179073 GGGGTCACATCATGGTCGAG 60.179 60.000 0.00 0.00 0.00 4.04
5914 14778 5.241506 ACAAGCGATTTACCATATTGGGATG 59.758 40.000 0.00 0.00 43.37 3.51
5938 14802 2.361757 CAGTGATTCACCCTGTTTGCAA 59.638 45.455 13.14 0.00 34.49 4.08
5940 14804 1.336240 GCAGTGATTCACCCTGTTTGC 60.336 52.381 13.14 11.21 34.49 3.68
5956 14820 1.294659 GCGCTGAGCTTACTTGCAGT 61.295 55.000 1.78 0.00 44.04 4.40
5957 14821 1.423056 GCGCTGAGCTTACTTGCAG 59.577 57.895 1.78 0.00 44.04 4.41
5982 14846 1.796459 CAGTAGGTTGTTGTGGCGTAC 59.204 52.381 0.00 0.00 0.00 3.67
6046 14910 1.303561 TTGTGCCTCATCACTGGGC 60.304 57.895 0.00 0.00 45.45 5.36
6065 14929 1.443194 CACGTCCGTCGGTAGGTTG 60.443 63.158 11.88 0.00 44.69 3.77
6066 14930 1.600636 TCACGTCCGTCGGTAGGTT 60.601 57.895 11.88 0.00 44.69 3.50
6068 14932 2.482374 GTCACGTCCGTCGGTAGG 59.518 66.667 11.88 6.53 44.69 3.18
6069 14933 2.037136 AGGTCACGTCCGTCGGTAG 61.037 63.158 11.88 9.08 44.69 3.18
6070 14934 2.032528 AGGTCACGTCCGTCGGTA 59.967 61.111 11.88 0.00 44.69 4.02
6071 14935 3.667282 CAGGTCACGTCCGTCGGT 61.667 66.667 11.88 0.00 44.69 4.69
6072 14936 4.415332 CCAGGTCACGTCCGTCGG 62.415 72.222 4.39 4.39 44.69 4.79
6073 14937 4.415332 CCCAGGTCACGTCCGTCG 62.415 72.222 0.00 0.00 46.00 5.12
6074 14938 3.300765 ACCCAGGTCACGTCCGTC 61.301 66.667 0.00 0.00 0.00 4.79
6075 14939 3.612681 CACCCAGGTCACGTCCGT 61.613 66.667 0.00 0.00 0.00 4.69
6076 14940 2.372040 TTTCACCCAGGTCACGTCCG 62.372 60.000 0.00 0.00 0.00 4.79
6077 14941 0.036306 ATTTCACCCAGGTCACGTCC 59.964 55.000 0.00 0.00 0.00 4.79
6078 14942 1.156736 CATTTCACCCAGGTCACGTC 58.843 55.000 0.00 0.00 0.00 4.34
6079 14943 0.762418 TCATTTCACCCAGGTCACGT 59.238 50.000 0.00 0.00 0.00 4.49
6080 14944 1.890876 TTCATTTCACCCAGGTCACG 58.109 50.000 0.00 0.00 0.00 4.35
6081 14945 3.004734 CACTTTCATTTCACCCAGGTCAC 59.995 47.826 0.00 0.00 0.00 3.67
6146 15011 2.037136 GTGCGCCATCAGCTCAACT 61.037 57.895 4.18 0.00 38.09 3.16
6218 15083 1.416813 GATCAGCGTTGTCTGGCTCG 61.417 60.000 0.00 0.00 37.41 5.03
6224 15089 2.164624 GTCCTACAGATCAGCGTTGTCT 59.835 50.000 0.00 0.00 0.00 3.41
6283 15149 1.573829 GCCGTCTTTGCCATCGACAA 61.574 55.000 0.00 0.00 0.00 3.18
6285 15151 1.970917 CTGCCGTCTTTGCCATCGAC 61.971 60.000 0.00 0.00 0.00 4.20
6301 15167 3.965539 ATCACAGCTGCGGGACTGC 62.966 63.158 15.27 0.00 43.18 4.40
6311 15177 0.792640 CGCTTGTCGAAATCACAGCT 59.207 50.000 0.00 0.00 41.67 4.24
6339 15206 0.613260 TCCGGCAAGCTACAGTTCAT 59.387 50.000 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.