Multiple sequence alignment - TraesCS6B01G464500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G464500 chr6B 100.000 3941 0 0 1 3941 715988178 715984238 0.000000e+00 7278
1 TraesCS6B01G464500 chr6B 98.676 831 11 0 1 831 596598966 596598136 0.000000e+00 1474
2 TraesCS6B01G464500 chr6B 76.868 1954 400 35 1816 3752 715850125 715848207 0.000000e+00 1057
3 TraesCS6B01G464500 chr6B 74.701 1842 408 42 1828 3636 648359499 648361315 0.000000e+00 767
4 TraesCS6B01G464500 chr6B 85.081 744 103 7 1001 1740 715953703 715952964 0.000000e+00 752
5 TraesCS6B01G464500 chr6B 77.394 1159 239 18 1822 2969 715860640 715859494 0.000000e+00 667
6 TraesCS6B01G464500 chr6B 79.058 764 135 12 997 1737 716109931 716109170 5.880000e-138 501
7 TraesCS6B01G464500 chr6B 77.197 785 162 13 967 1740 715780597 715779819 3.610000e-120 442
8 TraesCS6B01G464500 chrUn 83.837 2017 281 28 1824 3830 294373660 294375641 0.000000e+00 1877
9 TraesCS6B01G464500 chrUn 98.917 831 9 0 1 831 171011178 171012008 0.000000e+00 1485
10 TraesCS6B01G464500 chrUn 88.847 798 85 3 1000 1795 324085068 324084273 0.000000e+00 977
11 TraesCS6B01G464500 chrUn 75.910 1951 416 40 1824 3740 62149027 62150957 0.000000e+00 950
12 TraesCS6B01G464500 chrUn 89.840 689 70 0 1107 1795 355203448 355204136 0.000000e+00 885
13 TraesCS6B01G464500 chrUn 85.101 745 109 2 997 1740 309434559 309433816 0.000000e+00 760
14 TraesCS6B01G464500 chrUn 85.101 745 109 2 997 1740 339562600 339561857 0.000000e+00 760
15 TraesCS6B01G464500 chrUn 79.599 799 154 6 997 1795 75097708 75096919 7.390000e-157 564
16 TraesCS6B01G464500 chrUn 79.058 807 149 12 993 1783 305405288 305406090 1.610000e-148 536
17 TraesCS6B01G464500 chrUn 79.357 746 148 5 1824 2566 297823810 297823068 1.620000e-143 520
18 TraesCS6B01G464500 chr4A 98.797 831 10 0 1 831 79641882 79641052 0.000000e+00 1480
19 TraesCS6B01G464500 chr7A 98.556 831 12 0 1 831 638504772 638503942 0.000000e+00 1469
20 TraesCS6B01G464500 chr1D 98.556 831 12 0 1 831 12981000 12980170 0.000000e+00 1469
21 TraesCS6B01G464500 chr2A 98.436 831 13 0 1 831 10051719 10050889 0.000000e+00 1463
22 TraesCS6B01G464500 chr1B 98.315 831 14 0 1 831 672544168 672544998 0.000000e+00 1458
23 TraesCS6B01G464500 chr7B 98.075 831 16 0 1 831 54046256 54045426 0.000000e+00 1447
24 TraesCS6B01G464500 chr3B 98.075 831 16 0 1 831 759907678 759908508 0.000000e+00 1447
25 TraesCS6B01G464500 chr7D 79.346 1956 349 34 1824 3751 53342816 53340888 0.000000e+00 1323
26 TraesCS6B01G464500 chr6A 76.130 1969 404 50 1824 3749 614676292 614674347 0.000000e+00 972
27 TraesCS6B01G464500 chr6A 78.941 812 153 10 993 1789 614697833 614697025 1.610000e-148 536
28 TraesCS6B01G464500 chr6A 79.357 746 148 5 1824 2566 614691992 614691250 1.620000e-143 520
29 TraesCS6B01G464500 chr6A 78.250 800 146 19 997 1773 614795164 614794370 4.580000e-134 488
30 TraesCS6B01G464500 chr6A 75.490 816 178 15 986 1794 610670548 610669748 2.870000e-101 379
31 TraesCS6B01G464500 chr6D 79.119 795 166 0 1001 1795 469752009 469751215 2.070000e-152 549


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G464500 chr6B 715984238 715988178 3940 True 7278 7278 100.000 1 3941 1 chr6B.!!$R6 3940
1 TraesCS6B01G464500 chr6B 596598136 596598966 830 True 1474 1474 98.676 1 831 1 chr6B.!!$R1 830
2 TraesCS6B01G464500 chr6B 715848207 715850125 1918 True 1057 1057 76.868 1816 3752 1 chr6B.!!$R3 1936
3 TraesCS6B01G464500 chr6B 648359499 648361315 1816 False 767 767 74.701 1828 3636 1 chr6B.!!$F1 1808
4 TraesCS6B01G464500 chr6B 715952964 715953703 739 True 752 752 85.081 1001 1740 1 chr6B.!!$R5 739
5 TraesCS6B01G464500 chr6B 715859494 715860640 1146 True 667 667 77.394 1822 2969 1 chr6B.!!$R4 1147
6 TraesCS6B01G464500 chr6B 716109170 716109931 761 True 501 501 79.058 997 1737 1 chr6B.!!$R7 740
7 TraesCS6B01G464500 chr6B 715779819 715780597 778 True 442 442 77.197 967 1740 1 chr6B.!!$R2 773
8 TraesCS6B01G464500 chrUn 294373660 294375641 1981 False 1877 1877 83.837 1824 3830 1 chrUn.!!$F3 2006
9 TraesCS6B01G464500 chrUn 171011178 171012008 830 False 1485 1485 98.917 1 831 1 chrUn.!!$F2 830
10 TraesCS6B01G464500 chrUn 324084273 324085068 795 True 977 977 88.847 1000 1795 1 chrUn.!!$R4 795
11 TraesCS6B01G464500 chrUn 62149027 62150957 1930 False 950 950 75.910 1824 3740 1 chrUn.!!$F1 1916
12 TraesCS6B01G464500 chrUn 355203448 355204136 688 False 885 885 89.840 1107 1795 1 chrUn.!!$F5 688
13 TraesCS6B01G464500 chrUn 309433816 309434559 743 True 760 760 85.101 997 1740 1 chrUn.!!$R3 743
14 TraesCS6B01G464500 chrUn 339561857 339562600 743 True 760 760 85.101 997 1740 1 chrUn.!!$R5 743
15 TraesCS6B01G464500 chrUn 75096919 75097708 789 True 564 564 79.599 997 1795 1 chrUn.!!$R1 798
16 TraesCS6B01G464500 chrUn 305405288 305406090 802 False 536 536 79.058 993 1783 1 chrUn.!!$F4 790
17 TraesCS6B01G464500 chrUn 297823068 297823810 742 True 520 520 79.357 1824 2566 1 chrUn.!!$R2 742
18 TraesCS6B01G464500 chr4A 79641052 79641882 830 True 1480 1480 98.797 1 831 1 chr4A.!!$R1 830
19 TraesCS6B01G464500 chr7A 638503942 638504772 830 True 1469 1469 98.556 1 831 1 chr7A.!!$R1 830
20 TraesCS6B01G464500 chr1D 12980170 12981000 830 True 1469 1469 98.556 1 831 1 chr1D.!!$R1 830
21 TraesCS6B01G464500 chr2A 10050889 10051719 830 True 1463 1463 98.436 1 831 1 chr2A.!!$R1 830
22 TraesCS6B01G464500 chr1B 672544168 672544998 830 False 1458 1458 98.315 1 831 1 chr1B.!!$F1 830
23 TraesCS6B01G464500 chr7B 54045426 54046256 830 True 1447 1447 98.075 1 831 1 chr7B.!!$R1 830
24 TraesCS6B01G464500 chr3B 759907678 759908508 830 False 1447 1447 98.075 1 831 1 chr3B.!!$F1 830
25 TraesCS6B01G464500 chr7D 53340888 53342816 1928 True 1323 1323 79.346 1824 3751 1 chr7D.!!$R1 1927
26 TraesCS6B01G464500 chr6A 614674347 614676292 1945 True 972 972 76.130 1824 3749 1 chr6A.!!$R2 1925
27 TraesCS6B01G464500 chr6A 614697025 614697833 808 True 536 536 78.941 993 1789 1 chr6A.!!$R4 796
28 TraesCS6B01G464500 chr6A 614691250 614691992 742 True 520 520 79.357 1824 2566 1 chr6A.!!$R3 742
29 TraesCS6B01G464500 chr6A 614794370 614795164 794 True 488 488 78.250 997 1773 1 chr6A.!!$R5 776
30 TraesCS6B01G464500 chr6A 610669748 610670548 800 True 379 379 75.490 986 1794 1 chr6A.!!$R1 808
31 TraesCS6B01G464500 chr6D 469751215 469752009 794 True 549 549 79.119 1001 1795 1 chr6D.!!$R1 794

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
835 836 0.028505 CATCTGATTTGCTTCCGGCG 59.971 55.0 0.00 0.0 45.43 6.46 F
948 949 0.032130 ACACGAACGAGTCACTGCAT 59.968 50.0 0.14 0.0 0.00 3.96 F
2461 2487 0.106669 GGGTTTGATCCTACCTGGGC 60.107 60.0 11.77 0.0 34.75 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2759 2791 0.178846 TTGTCCTCCCCATCCTTGGA 60.179 55.0 0.0 0.0 46.92 3.53 R
2857 2889 0.675522 CACCCTAAACGCCCGATGTT 60.676 55.0 0.0 0.0 0.00 2.71 R
3717 3779 0.546598 CCTAGGGTGGTTGGGATGTC 59.453 60.0 0.0 0.0 0.00 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
219 220 7.016268 TCCTCTACTAGTCATTGGTTTCAAAGT 59.984 37.037 0.00 0.00 36.36 2.66
262 263 0.872388 GTGGGCAGGTTAGTGTTTCG 59.128 55.000 0.00 0.00 0.00 3.46
455 456 1.152312 GAATCCCTCTCCGCCCCTA 60.152 63.158 0.00 0.00 0.00 3.53
572 573 1.209747 GGCTTCCGGTTCTGTATTCCT 59.790 52.381 0.00 0.00 0.00 3.36
705 706 8.552296 AGCCATTATAGGATCGGATAAAGATTT 58.448 33.333 0.00 0.00 0.00 2.17
724 725 2.877097 TACTCTTTGCCAATGCCTGA 57.123 45.000 0.00 0.00 36.33 3.86
831 832 1.672881 CCCGTCATCTGATTTGCTTCC 59.327 52.381 0.00 0.00 0.00 3.46
832 833 1.328680 CCGTCATCTGATTTGCTTCCG 59.671 52.381 0.00 0.00 0.00 4.30
833 834 1.328680 CGTCATCTGATTTGCTTCCGG 59.671 52.381 0.00 0.00 0.00 5.14
834 835 1.064654 GTCATCTGATTTGCTTCCGGC 59.935 52.381 0.00 0.00 42.22 6.13
835 836 0.028505 CATCTGATTTGCTTCCGGCG 59.971 55.000 0.00 0.00 45.43 6.46
836 837 0.107703 ATCTGATTTGCTTCCGGCGA 60.108 50.000 9.30 0.00 45.43 5.54
837 838 0.740868 TCTGATTTGCTTCCGGCGAG 60.741 55.000 9.30 0.00 45.43 5.03
838 839 2.315038 CTGATTTGCTTCCGGCGAGC 62.315 60.000 19.17 19.17 45.43 5.03
839 840 3.440356 GATTTGCTTCCGGCGAGCG 62.440 63.158 20.16 0.00 45.43 5.03
840 841 3.950794 ATTTGCTTCCGGCGAGCGA 62.951 57.895 20.16 17.06 45.43 4.93
849 850 2.807895 GGCGAGCGAGCGTTTGTA 60.808 61.111 0.00 0.00 38.18 2.41
850 851 2.165301 GGCGAGCGAGCGTTTGTAT 61.165 57.895 0.00 0.00 38.18 2.29
851 852 1.270099 GCGAGCGAGCGTTTGTATC 59.730 57.895 0.00 0.00 0.00 2.24
852 853 1.140407 GCGAGCGAGCGTTTGTATCT 61.140 55.000 0.00 0.00 0.00 1.98
853 854 1.269166 CGAGCGAGCGTTTGTATCTT 58.731 50.000 0.00 0.00 0.00 2.40
854 855 1.654105 CGAGCGAGCGTTTGTATCTTT 59.346 47.619 0.00 0.00 0.00 2.52
855 856 2.092211 CGAGCGAGCGTTTGTATCTTTT 59.908 45.455 0.00 0.00 0.00 2.27
856 857 3.423123 CGAGCGAGCGTTTGTATCTTTTT 60.423 43.478 0.00 0.00 0.00 1.94
857 858 4.066710 AGCGAGCGTTTGTATCTTTTTC 57.933 40.909 0.00 0.00 0.00 2.29
858 859 3.496884 AGCGAGCGTTTGTATCTTTTTCA 59.503 39.130 0.00 0.00 0.00 2.69
859 860 3.840763 GCGAGCGTTTGTATCTTTTTCAG 59.159 43.478 0.00 0.00 0.00 3.02
860 861 4.610680 GCGAGCGTTTGTATCTTTTTCAGT 60.611 41.667 0.00 0.00 0.00 3.41
861 862 4.840772 CGAGCGTTTGTATCTTTTTCAGTG 59.159 41.667 0.00 0.00 0.00 3.66
862 863 4.537015 AGCGTTTGTATCTTTTTCAGTGC 58.463 39.130 0.00 0.00 0.00 4.40
863 864 4.036262 AGCGTTTGTATCTTTTTCAGTGCA 59.964 37.500 0.00 0.00 0.00 4.57
864 865 4.379793 GCGTTTGTATCTTTTTCAGTGCAG 59.620 41.667 0.00 0.00 0.00 4.41
865 866 5.510671 CGTTTGTATCTTTTTCAGTGCAGT 58.489 37.500 0.00 0.00 0.00 4.40
866 867 6.655062 CGTTTGTATCTTTTTCAGTGCAGTA 58.345 36.000 0.00 0.00 0.00 2.74
867 868 7.129622 CGTTTGTATCTTTTTCAGTGCAGTAA 58.870 34.615 0.00 0.00 0.00 2.24
868 869 7.321271 CGTTTGTATCTTTTTCAGTGCAGTAAG 59.679 37.037 0.00 0.00 0.00 2.34
869 870 7.801716 TTGTATCTTTTTCAGTGCAGTAAGT 57.198 32.000 0.00 0.00 0.00 2.24
870 871 8.896320 TTGTATCTTTTTCAGTGCAGTAAGTA 57.104 30.769 0.00 0.00 0.00 2.24
871 872 8.896320 TGTATCTTTTTCAGTGCAGTAAGTAA 57.104 30.769 0.00 0.00 0.00 2.24
872 873 9.502091 TGTATCTTTTTCAGTGCAGTAAGTAAT 57.498 29.630 0.00 0.00 0.00 1.89
873 874 9.760660 GTATCTTTTTCAGTGCAGTAAGTAATG 57.239 33.333 0.00 0.00 0.00 1.90
874 875 6.668323 TCTTTTTCAGTGCAGTAAGTAATGC 58.332 36.000 3.88 3.88 46.42 3.56
875 876 6.486657 TCTTTTTCAGTGCAGTAAGTAATGCT 59.513 34.615 11.56 0.00 46.39 3.79
876 877 6.633500 TTTTCAGTGCAGTAAGTAATGCTT 57.367 33.333 11.56 0.00 46.39 3.91
877 878 5.611796 TTCAGTGCAGTAAGTAATGCTTG 57.388 39.130 11.56 9.83 46.39 4.01
878 879 4.002982 TCAGTGCAGTAAGTAATGCTTGG 58.997 43.478 11.56 2.16 46.39 3.61
879 880 4.002982 CAGTGCAGTAAGTAATGCTTGGA 58.997 43.478 11.56 0.00 46.39 3.53
880 881 4.003648 AGTGCAGTAAGTAATGCTTGGAC 58.996 43.478 11.56 2.37 46.39 4.02
881 882 4.003648 GTGCAGTAAGTAATGCTTGGACT 58.996 43.478 11.56 0.00 46.39 3.85
882 883 4.455877 GTGCAGTAAGTAATGCTTGGACTT 59.544 41.667 11.56 5.73 46.39 3.01
883 884 5.642063 GTGCAGTAAGTAATGCTTGGACTTA 59.358 40.000 11.56 4.23 46.39 2.24
884 885 6.148811 GTGCAGTAAGTAATGCTTGGACTTAA 59.851 38.462 11.56 0.00 46.39 1.85
885 886 6.884295 TGCAGTAAGTAATGCTTGGACTTAAT 59.116 34.615 11.56 5.75 46.39 1.40
886 887 8.044309 TGCAGTAAGTAATGCTTGGACTTAATA 58.956 33.333 11.56 0.00 46.39 0.98
887 888 8.552034 GCAGTAAGTAATGCTTGGACTTAATAG 58.448 37.037 3.61 5.40 43.28 1.73
888 889 8.552034 CAGTAAGTAATGCTTGGACTTAATAGC 58.448 37.037 8.23 0.00 37.40 2.97
889 890 8.487028 AGTAAGTAATGCTTGGACTTAATAGCT 58.513 33.333 0.00 0.00 37.40 3.32
890 891 9.110502 GTAAGTAATGCTTGGACTTAATAGCTT 57.889 33.333 0.00 0.00 37.40 3.74
891 892 7.559590 AGTAATGCTTGGACTTAATAGCTTG 57.440 36.000 0.00 0.00 34.77 4.01
892 893 4.907879 ATGCTTGGACTTAATAGCTTGC 57.092 40.909 0.00 0.00 34.77 4.01
893 894 3.955471 TGCTTGGACTTAATAGCTTGCT 58.045 40.909 0.00 0.00 34.77 3.91
894 895 4.335416 TGCTTGGACTTAATAGCTTGCTT 58.665 39.130 0.00 0.00 34.77 3.91
895 896 4.396166 TGCTTGGACTTAATAGCTTGCTTC 59.604 41.667 0.00 0.00 34.77 3.86
896 897 4.396166 GCTTGGACTTAATAGCTTGCTTCA 59.604 41.667 0.00 0.00 0.00 3.02
897 898 5.067023 GCTTGGACTTAATAGCTTGCTTCAT 59.933 40.000 0.00 0.00 0.00 2.57
898 899 6.405176 GCTTGGACTTAATAGCTTGCTTCATT 60.405 38.462 0.00 0.00 0.00 2.57
899 900 7.466746 TTGGACTTAATAGCTTGCTTCATTT 57.533 32.000 0.00 0.00 0.00 2.32
900 901 6.855836 TGGACTTAATAGCTTGCTTCATTTG 58.144 36.000 0.00 0.00 0.00 2.32
901 902 6.658816 TGGACTTAATAGCTTGCTTCATTTGA 59.341 34.615 0.00 0.00 0.00 2.69
902 903 7.340232 TGGACTTAATAGCTTGCTTCATTTGAT 59.660 33.333 0.00 0.00 0.00 2.57
903 904 8.193438 GGACTTAATAGCTTGCTTCATTTGATT 58.807 33.333 0.00 0.00 0.00 2.57
904 905 9.230932 GACTTAATAGCTTGCTTCATTTGATTC 57.769 33.333 0.00 0.00 0.00 2.52
905 906 7.912250 ACTTAATAGCTTGCTTCATTTGATTCG 59.088 33.333 0.00 0.00 0.00 3.34
906 907 2.872370 AGCTTGCTTCATTTGATTCGC 58.128 42.857 0.00 0.00 0.00 4.70
907 908 2.490903 AGCTTGCTTCATTTGATTCGCT 59.509 40.909 0.00 0.00 0.00 4.93
908 909 3.057033 AGCTTGCTTCATTTGATTCGCTT 60.057 39.130 0.00 0.00 0.00 4.68
909 910 3.676646 GCTTGCTTCATTTGATTCGCTTT 59.323 39.130 0.00 0.00 0.00 3.51
910 911 4.151157 GCTTGCTTCATTTGATTCGCTTTT 59.849 37.500 0.00 0.00 0.00 2.27
911 912 5.667156 GCTTGCTTCATTTGATTCGCTTTTC 60.667 40.000 0.00 0.00 0.00 2.29
912 913 4.869215 TGCTTCATTTGATTCGCTTTTCA 58.131 34.783 0.00 0.00 0.00 2.69
913 914 4.919168 TGCTTCATTTGATTCGCTTTTCAG 59.081 37.500 0.00 0.00 0.00 3.02
914 915 4.325472 GCTTCATTTGATTCGCTTTTCAGG 59.675 41.667 0.00 0.00 0.00 3.86
915 916 3.836949 TCATTTGATTCGCTTTTCAGGC 58.163 40.909 0.00 0.00 0.00 4.85
916 917 3.507233 TCATTTGATTCGCTTTTCAGGCT 59.493 39.130 0.00 0.00 0.00 4.58
917 918 2.995466 TTGATTCGCTTTTCAGGCTG 57.005 45.000 8.58 8.58 0.00 4.85
918 919 1.896220 TGATTCGCTTTTCAGGCTGT 58.104 45.000 15.27 0.00 0.00 4.40
919 920 3.052455 TGATTCGCTTTTCAGGCTGTA 57.948 42.857 15.27 1.01 0.00 2.74
920 921 3.002791 TGATTCGCTTTTCAGGCTGTAG 58.997 45.455 15.27 11.39 0.00 2.74
921 922 2.831685 TTCGCTTTTCAGGCTGTAGA 57.168 45.000 15.27 0.00 0.00 2.59
922 923 3.334583 TTCGCTTTTCAGGCTGTAGAT 57.665 42.857 15.27 0.00 0.00 1.98
923 924 3.334583 TCGCTTTTCAGGCTGTAGATT 57.665 42.857 15.27 0.00 0.00 2.40
924 925 3.002791 TCGCTTTTCAGGCTGTAGATTG 58.997 45.455 15.27 2.47 0.00 2.67
925 926 3.002791 CGCTTTTCAGGCTGTAGATTGA 58.997 45.455 15.27 0.00 0.00 2.57
926 927 3.181516 CGCTTTTCAGGCTGTAGATTGAC 60.182 47.826 15.27 0.00 0.00 3.18
927 928 4.006319 GCTTTTCAGGCTGTAGATTGACT 58.994 43.478 15.27 0.00 0.00 3.41
928 929 4.142730 GCTTTTCAGGCTGTAGATTGACTG 60.143 45.833 15.27 0.00 0.00 3.51
929 930 4.890158 TTTCAGGCTGTAGATTGACTGA 57.110 40.909 15.27 0.00 33.58 3.41
930 931 3.876274 TCAGGCTGTAGATTGACTGAC 57.124 47.619 15.27 0.00 30.75 3.51
931 932 3.165071 TCAGGCTGTAGATTGACTGACA 58.835 45.455 15.27 0.00 30.75 3.58
932 933 3.056536 TCAGGCTGTAGATTGACTGACAC 60.057 47.826 15.27 0.00 30.75 3.67
933 934 2.094494 AGGCTGTAGATTGACTGACACG 60.094 50.000 0.00 0.00 0.00 4.49
934 935 2.094700 GGCTGTAGATTGACTGACACGA 60.095 50.000 0.00 0.00 0.00 4.35
935 936 3.575630 GCTGTAGATTGACTGACACGAA 58.424 45.455 0.00 0.00 0.00 3.85
936 937 3.365220 GCTGTAGATTGACTGACACGAAC 59.635 47.826 0.00 0.00 0.00 3.95
937 938 3.561503 TGTAGATTGACTGACACGAACG 58.438 45.455 0.00 0.00 0.00 3.95
938 939 3.251487 TGTAGATTGACTGACACGAACGA 59.749 43.478 0.14 0.00 0.00 3.85
939 940 2.935042 AGATTGACTGACACGAACGAG 58.065 47.619 0.14 0.00 0.00 4.18
940 941 2.293677 AGATTGACTGACACGAACGAGT 59.706 45.455 0.14 0.00 0.00 4.18
941 942 2.115348 TTGACTGACACGAACGAGTC 57.885 50.000 15.34 15.34 36.50 3.36
942 943 1.018910 TGACTGACACGAACGAGTCA 58.981 50.000 21.19 21.19 41.93 3.41
943 944 1.268386 TGACTGACACGAACGAGTCAC 60.268 52.381 19.42 13.21 39.86 3.67
944 945 1.002684 GACTGACACGAACGAGTCACT 60.003 52.381 19.42 12.81 39.92 3.41
945 946 1.268589 ACTGACACGAACGAGTCACTG 60.269 52.381 19.42 14.56 39.92 3.66
946 947 0.594028 TGACACGAACGAGTCACTGC 60.594 55.000 19.42 0.00 39.92 4.40
947 948 0.594028 GACACGAACGAGTCACTGCA 60.594 55.000 16.77 0.00 36.11 4.41
948 949 0.032130 ACACGAACGAGTCACTGCAT 59.968 50.000 0.14 0.00 0.00 3.96
949 950 1.139989 CACGAACGAGTCACTGCATT 58.860 50.000 0.14 0.00 0.00 3.56
950 951 1.125021 CACGAACGAGTCACTGCATTC 59.875 52.381 0.14 0.00 0.00 2.67
951 952 0.363512 CGAACGAGTCACTGCATTCG 59.636 55.000 0.99 0.99 38.88 3.34
952 953 1.698165 GAACGAGTCACTGCATTCGA 58.302 50.000 10.32 0.00 36.89 3.71
953 954 2.263077 GAACGAGTCACTGCATTCGAT 58.737 47.619 10.32 1.10 36.89 3.59
954 955 2.370281 ACGAGTCACTGCATTCGATT 57.630 45.000 10.32 0.00 36.89 3.34
955 956 2.263077 ACGAGTCACTGCATTCGATTC 58.737 47.619 10.32 3.23 36.89 2.52
956 957 1.253800 CGAGTCACTGCATTCGATTCG 59.746 52.381 0.00 0.00 35.19 3.34
957 958 2.530177 GAGTCACTGCATTCGATTCGA 58.470 47.619 4.29 4.29 0.00 3.71
958 959 2.263077 AGTCACTGCATTCGATTCGAC 58.737 47.619 8.55 0.00 34.89 4.20
959 960 1.992667 GTCACTGCATTCGATTCGACA 59.007 47.619 8.55 3.02 34.89 4.35
960 961 2.411748 GTCACTGCATTCGATTCGACAA 59.588 45.455 8.55 0.00 34.89 3.18
961 962 2.411748 TCACTGCATTCGATTCGACAAC 59.588 45.455 8.55 1.52 34.89 3.32
962 963 1.732259 ACTGCATTCGATTCGACAACC 59.268 47.619 8.55 0.00 34.89 3.77
963 964 2.002586 CTGCATTCGATTCGACAACCT 58.997 47.619 8.55 0.00 34.89 3.50
964 965 1.999735 TGCATTCGATTCGACAACCTC 59.000 47.619 8.55 0.00 34.89 3.85
965 966 1.327764 GCATTCGATTCGACAACCTCC 59.672 52.381 8.55 0.00 34.89 4.30
970 971 1.740380 CGATTCGACAACCTCCATGCT 60.740 52.381 0.00 0.00 0.00 3.79
984 985 1.404391 CCATGCTGAATTGACAGAGCC 59.596 52.381 0.00 0.00 39.94 4.70
1005 1007 0.323360 GCAACACTGGGGCTATGGAA 60.323 55.000 0.00 0.00 0.00 3.53
1019 1021 2.281484 GGAAGCGGCTGTGGTGAA 60.281 61.111 1.81 0.00 0.00 3.18
1057 1059 0.478507 CAAACCTGTCCTGGGGAAGT 59.521 55.000 0.00 0.00 31.38 3.01
1103 1105 1.034838 AAGCGTTTCAAGGGTGTGCA 61.035 50.000 0.00 0.00 0.00 4.57
1125 1127 2.959030 CGAGGACATCAGGTTCCTCATA 59.041 50.000 16.03 0.00 46.69 2.15
1128 1130 4.624913 AGGACATCAGGTTCCTCATAGAA 58.375 43.478 0.00 0.00 0.00 2.10
1147 1149 0.111061 AGAACTTGAGGCCATGCACA 59.889 50.000 5.01 0.00 0.00 4.57
1150 1152 3.332493 CTTGAGGCCATGCACACGC 62.332 63.158 5.01 0.00 39.24 5.34
1164 1166 2.742053 GCACACGCTTCTCCTCAAAATA 59.258 45.455 0.00 0.00 34.30 1.40
1208 1213 1.544246 GCAAGATAAAGTTTGGGCGGT 59.456 47.619 0.00 0.00 0.00 5.68
1212 1217 0.540830 ATAAAGTTTGGGCGGTGGCA 60.541 50.000 0.00 0.00 42.47 4.92
1270 1275 5.418676 TCGATGACTTCATGCAAAGTATCA 58.581 37.500 3.78 0.26 39.55 2.15
1380 1385 2.866156 CGGCAGCGAGATCAAAGATTTA 59.134 45.455 0.00 0.00 0.00 1.40
1430 1435 5.071788 AGAGGAATGAAAGGTACAAGACACA 59.928 40.000 0.00 0.00 0.00 3.72
1461 1466 0.110238 CCAACACCAGAAATGCGTCG 60.110 55.000 0.00 0.00 0.00 5.12
1512 1517 1.901833 GATGCCTCCAAATTTGTGGGT 59.098 47.619 21.43 8.64 39.34 4.51
1518 1523 4.020662 GCCTCCAAATTTGTGGGTATTGAA 60.021 41.667 21.43 0.00 39.34 2.69
1533 1538 2.978156 TTGAAGAACCCAAGGCTGAT 57.022 45.000 0.00 0.00 0.00 2.90
1702 1728 0.389948 GGTGTCGCGAAATCCAGACT 60.390 55.000 12.06 0.00 34.92 3.24
1786 1812 1.526887 CAGGTAGCACACAACAAGTCG 59.473 52.381 0.00 0.00 0.00 4.18
1795 1821 4.213674 CACACAACAAGTCGTCATGAATG 58.786 43.478 0.00 0.00 0.00 2.67
1796 1822 3.228749 CACAACAAGTCGTCATGAATGC 58.771 45.455 0.00 0.00 0.00 3.56
1797 1823 2.877786 ACAACAAGTCGTCATGAATGCA 59.122 40.909 0.00 0.00 0.00 3.96
1798 1824 3.228749 CAACAAGTCGTCATGAATGCAC 58.771 45.455 0.00 0.00 0.00 4.57
1799 1825 2.493035 ACAAGTCGTCATGAATGCACA 58.507 42.857 0.00 0.00 0.00 4.57
1800 1826 2.224079 ACAAGTCGTCATGAATGCACAC 59.776 45.455 0.00 0.00 0.00 3.82
1801 1827 2.168326 AGTCGTCATGAATGCACACA 57.832 45.000 0.00 0.00 0.00 3.72
1802 1828 2.493035 AGTCGTCATGAATGCACACAA 58.507 42.857 0.00 0.00 0.00 3.33
1803 1829 2.224079 AGTCGTCATGAATGCACACAAC 59.776 45.455 0.00 0.00 0.00 3.32
1804 1830 2.032117 GTCGTCATGAATGCACACAACA 60.032 45.455 0.00 0.00 0.00 3.33
1805 1831 2.615912 TCGTCATGAATGCACACAACAA 59.384 40.909 0.00 0.00 0.00 2.83
1806 1832 2.975193 CGTCATGAATGCACACAACAAG 59.025 45.455 0.00 0.00 0.00 3.16
1807 1833 3.548616 CGTCATGAATGCACACAACAAGT 60.549 43.478 0.00 0.00 0.00 3.16
1808 1834 3.976942 GTCATGAATGCACACAACAAGTC 59.023 43.478 0.00 0.00 0.00 3.01
1809 1835 2.753989 TGAATGCACACAACAAGTCG 57.246 45.000 0.00 0.00 0.00 4.18
1810 1836 1.333308 TGAATGCACACAACAAGTCGG 59.667 47.619 0.00 0.00 0.00 4.79
1811 1837 1.601903 GAATGCACACAACAAGTCGGA 59.398 47.619 0.00 0.00 0.00 4.55
1812 1838 1.896220 ATGCACACAACAAGTCGGAT 58.104 45.000 0.00 0.00 0.00 4.18
1813 1839 2.535012 TGCACACAACAAGTCGGATA 57.465 45.000 0.00 0.00 0.00 2.59
1814 1840 3.052455 TGCACACAACAAGTCGGATAT 57.948 42.857 0.00 0.00 0.00 1.63
1815 1841 3.407698 TGCACACAACAAGTCGGATATT 58.592 40.909 0.00 0.00 0.00 1.28
1816 1842 3.188254 TGCACACAACAAGTCGGATATTG 59.812 43.478 4.84 4.84 0.00 1.90
1817 1843 3.435327 GCACACAACAAGTCGGATATTGA 59.565 43.478 11.44 0.00 0.00 2.57
1818 1844 4.083537 GCACACAACAAGTCGGATATTGAA 60.084 41.667 11.44 0.00 0.00 2.69
1819 1845 5.391950 GCACACAACAAGTCGGATATTGAAT 60.392 40.000 11.44 0.00 0.00 2.57
1820 1846 6.611381 CACACAACAAGTCGGATATTGAATT 58.389 36.000 11.44 0.00 0.00 2.17
2051 2077 4.396478 TCACAGAAGACTATTCGACTCCAG 59.604 45.833 0.00 0.00 0.00 3.86
2052 2078 3.697045 ACAGAAGACTATTCGACTCCAGG 59.303 47.826 0.00 0.00 0.00 4.45
2061 2087 3.502123 TTCGACTCCAGGGAAAATTGT 57.498 42.857 0.00 0.00 0.00 2.71
2070 2096 4.482025 TCCAGGGAAAATTGTCCTCCATAT 59.518 41.667 14.54 0.00 37.85 1.78
2170 2196 4.141711 TGGCTAACACAGAAAGAACAGAGT 60.142 41.667 0.00 0.00 0.00 3.24
2192 2218 2.958355 ACATGTGGAACCAAGTGAAAGG 59.042 45.455 0.00 0.00 34.36 3.11
2212 2238 2.604614 GGTTCAATTGGACGTGCACTTC 60.605 50.000 10.12 15.37 0.00 3.01
2220 2246 2.096819 TGGACGTGCACTTCAAAGAAAC 59.903 45.455 23.06 6.18 0.00 2.78
2223 2249 1.403679 CGTGCACTTCAAAGAAACCCA 59.596 47.619 16.19 0.00 0.00 4.51
2225 2251 3.186909 GTGCACTTCAAAGAAACCCAAC 58.813 45.455 10.32 0.00 0.00 3.77
2244 2270 4.158394 CCAACCGTTGAAGGAATGATGAAT 59.842 41.667 13.04 0.00 34.73 2.57
2251 2277 7.752239 CCGTTGAAGGAATGATGAATATATTGC 59.248 37.037 1.78 0.00 0.00 3.56
2273 2299 4.459337 GCCACTTAGTTATTTTGACCTGCT 59.541 41.667 0.00 0.00 0.00 4.24
2275 2301 6.516693 GCCACTTAGTTATTTTGACCTGCTTT 60.517 38.462 0.00 0.00 0.00 3.51
2283 2309 7.449704 AGTTATTTTGACCTGCTTTCTCATCTT 59.550 33.333 0.00 0.00 0.00 2.40
2303 2329 9.920133 TCATCTTAAGACATGTCTCTTATATGC 57.080 33.333 28.01 0.00 39.39 3.14
2327 2353 7.159372 GCCAGTATATTTCCGGAAGATTCTAA 58.841 38.462 17.97 0.22 0.00 2.10
2393 2419 7.012704 AGGATTCATTCATAAACAAGTCGGATG 59.987 37.037 0.00 0.00 0.00 3.51
2417 2443 3.846588 ACAGTACATGAGACAGGGGAAAT 59.153 43.478 0.00 0.00 0.00 2.17
2420 2446 5.030147 AGTACATGAGACAGGGGAAATGTA 58.970 41.667 0.00 0.00 31.19 2.29
2426 2452 7.557719 ACATGAGACAGGGGAAATGTATTTTAG 59.442 37.037 0.00 0.00 0.00 1.85
2461 2487 0.106669 GGGTTTGATCCTACCTGGGC 60.107 60.000 11.77 0.00 34.75 5.36
2489 2515 6.375455 ACAAATGAATATGGTGAAGTGGAGAC 59.625 38.462 0.00 0.00 0.00 3.36
2537 2563 9.423964 TCTTGATTTCATCATATCCAAATCCAA 57.576 29.630 0.00 0.00 39.39 3.53
2567 2593 7.498239 AGAGAACTTTGTTACTTTCCTTGGTAC 59.502 37.037 0.00 0.00 0.00 3.34
2625 2651 4.485024 TCGTCGATTATCTCTACAAGGC 57.515 45.455 0.00 0.00 0.00 4.35
2641 2667 4.359706 ACAAGGCGTCAAACAAGAAAATC 58.640 39.130 0.00 0.00 0.00 2.17
2675 2701 2.749621 CAGAAGGTCTGGATTTTTCCCG 59.250 50.000 0.00 0.00 40.71 5.14
2690 2722 1.226491 CCCGTGTACGATCCGTGTC 60.226 63.158 5.91 0.00 41.39 3.67
2707 2739 1.347707 TGTCTGGAGCTTTCGTGGAAT 59.652 47.619 0.00 0.00 0.00 3.01
2739 2771 0.813210 AGAAGCTTAGGCATCTGCGC 60.813 55.000 3.55 0.00 43.62 6.09
2751 2783 0.530744 ATCTGCGCGTTCTCCACTTA 59.469 50.000 8.43 0.00 0.00 2.24
2759 2791 3.251571 GCGTTCTCCACTTAGACGATTT 58.748 45.455 0.00 0.00 0.00 2.17
2789 2821 4.151883 TGGGGAGGACAAAATCTTGAAAG 58.848 43.478 0.00 0.00 36.33 2.62
2790 2822 3.511540 GGGGAGGACAAAATCTTGAAAGG 59.488 47.826 0.00 0.00 36.33 3.11
2798 2830 7.944554 AGGACAAAATCTTGAAAGGATAGTGAA 59.055 33.333 0.00 0.00 36.33 3.18
2809 2841 5.568620 AAGGATAGTGAAGTTGTTCCAGT 57.431 39.130 0.00 0.00 0.00 4.00
2822 2854 2.632996 TGTTCCAGTTGAGGTACCTGAG 59.367 50.000 22.10 0.00 0.00 3.35
2825 2857 2.042569 TCCAGTTGAGGTACCTGAGCTA 59.957 50.000 22.10 0.71 35.50 3.32
2857 2889 4.366267 AGGAATAAGAGAGCTCCCAGAAA 58.634 43.478 10.93 0.00 0.00 2.52
2859 2891 4.878971 GGAATAAGAGAGCTCCCAGAAAAC 59.121 45.833 10.93 0.00 0.00 2.43
2881 2913 0.674269 CGGGCGTTTAGGGTGCTTAA 60.674 55.000 0.00 0.00 0.00 1.85
2893 2925 3.844211 AGGGTGCTTAAAGATACTGGACA 59.156 43.478 0.00 0.00 0.00 4.02
2963 2995 7.798596 AATCTCAGAAAATTGTCGCATCTAT 57.201 32.000 0.00 0.00 0.00 1.98
2978 3010 6.700081 GTCGCATCTATTTGTTGACTATGGTA 59.300 38.462 0.00 0.00 0.00 3.25
3013 3045 3.406682 GGTTGCAAAGATGGAAGCG 57.593 52.632 0.00 0.00 43.72 4.68
3019 3051 1.269448 GCAAAGATGGAAGCGTTGGAA 59.731 47.619 0.00 0.00 41.92 3.53
3044 3076 0.246910 GAAAGAGGTCGGTGTCTCCC 59.753 60.000 0.00 0.00 0.00 4.30
3058 3090 4.339814 GGTGTCTCCCTACAGTCATTAGAG 59.660 50.000 0.00 0.00 0.00 2.43
3067 3099 5.419155 CCTACAGTCATTAGAGTTCCTGTCA 59.581 44.000 0.00 0.00 35.08 3.58
3108 3158 2.080336 TTGAGGAACCTGGCCCTTGG 62.080 60.000 0.00 2.06 31.84 3.61
3113 3163 1.938327 AACCTGGCCCTTGGTTCTT 59.062 52.632 16.26 0.00 42.26 2.52
3164 3214 1.078709 GCGCAACAGAGCTATTGTCA 58.921 50.000 0.30 0.00 0.00 3.58
3242 3298 4.471548 GAGAGGCCTCTTACAGGTACATA 58.528 47.826 35.48 0.00 45.61 2.29
3253 3309 4.826274 ACAGGTACATATGTGTGAGCTT 57.174 40.909 18.81 2.76 39.39 3.74
3254 3310 5.932619 ACAGGTACATATGTGTGAGCTTA 57.067 39.130 18.81 0.00 39.39 3.09
3255 3311 5.907207 ACAGGTACATATGTGTGAGCTTAG 58.093 41.667 18.81 5.56 39.39 2.18
3287 3346 6.546972 AGAAGCTTGTTAACTGCTCTTTAC 57.453 37.500 20.83 12.85 35.85 2.01
3288 3347 6.055588 AGAAGCTTGTTAACTGCTCTTTACA 58.944 36.000 20.83 0.00 35.85 2.41
3289 3348 5.931441 AGCTTGTTAACTGCTCTTTACAG 57.069 39.130 16.90 0.00 41.08 2.74
3347 3406 3.636153 ACCTCCAACAGCTAATCCTTC 57.364 47.619 0.00 0.00 0.00 3.46
3389 3448 0.622136 TGATCTCTGCATGCTTGGGT 59.378 50.000 20.33 4.51 0.00 4.51
3397 3456 0.034089 GCATGCTTGGGTCCTTACCT 60.034 55.000 11.37 0.00 45.95 3.08
3398 3457 1.755179 CATGCTTGGGTCCTTACCTG 58.245 55.000 0.00 0.00 45.95 4.00
3404 3463 0.909610 TGGGTCCTTACCTGCTCTGG 60.910 60.000 0.00 0.00 45.95 3.86
3405 3464 0.617820 GGGTCCTTACCTGCTCTGGA 60.618 60.000 0.00 0.00 45.95 3.86
3413 3472 0.617413 ACCTGCTCTGGACATTCTGG 59.383 55.000 0.00 0.00 0.00 3.86
3420 3479 1.902508 TCTGGACATTCTGGACCTGAC 59.097 52.381 0.00 0.00 0.00 3.51
3461 3520 5.227569 TGAAAAGCTCAGAATCAGTGGTA 57.772 39.130 0.00 0.00 0.00 3.25
3463 3522 6.240894 TGAAAAGCTCAGAATCAGTGGTATT 58.759 36.000 0.00 0.00 0.00 1.89
3517 3576 2.586648 GTGGAACTGGTGATTTCCCT 57.413 50.000 0.00 0.00 40.68 4.20
3553 3612 4.613143 GCAGGATCCATGCCCAAT 57.387 55.556 15.82 0.00 37.73 3.16
3563 3622 5.541484 GGATCCATGCCCAATCTAGAAAAAT 59.459 40.000 6.95 0.00 0.00 1.82
3565 3624 6.224665 TCCATGCCCAATCTAGAAAAATTG 57.775 37.500 0.00 0.00 33.57 2.32
3602 3661 4.081972 TGCTCCTAGTTGAAGCTAACTCTG 60.082 45.833 5.14 1.31 41.01 3.35
3630 3689 2.266279 TGGAATCGAGAACCTCCCTTT 58.734 47.619 0.00 0.00 0.00 3.11
3654 3713 4.562347 CCTCACTACTGTCAAATGCAGAGT 60.562 45.833 10.42 7.47 37.40 3.24
3665 3727 1.290203 ATGCAGAGTAAATGGCGACG 58.710 50.000 0.00 0.00 0.00 5.12
3666 3728 0.245266 TGCAGAGTAAATGGCGACGA 59.755 50.000 0.00 0.00 0.00 4.20
3667 3729 1.337354 TGCAGAGTAAATGGCGACGAA 60.337 47.619 0.00 0.00 0.00 3.85
3692 3754 2.554032 GGCATTGTTGAAGCTGTACAGT 59.446 45.455 23.44 5.15 0.00 3.55
3736 3798 0.546598 GACATCCCAACCACCCTAGG 59.453 60.000 0.06 0.06 0.00 3.02
3740 3802 0.345502 TCCCAACCACCCTAGGCTAT 59.654 55.000 2.05 0.00 0.00 2.97
3749 3811 3.181450 CCACCCTAGGCTATTCTTTCAGG 60.181 52.174 2.05 0.00 0.00 3.86
3750 3812 3.711704 CACCCTAGGCTATTCTTTCAGGA 59.288 47.826 2.05 0.00 0.00 3.86
3757 3819 5.880901 AGGCTATTCTTTCAGGAAGTTGAA 58.119 37.500 0.00 0.00 36.70 2.69
3758 3820 5.942826 AGGCTATTCTTTCAGGAAGTTGAAG 59.057 40.000 0.00 0.00 38.25 3.02
3759 3821 5.392487 GGCTATTCTTTCAGGAAGTTGAAGC 60.392 44.000 0.00 0.00 38.25 3.86
3760 3822 5.414144 GCTATTCTTTCAGGAAGTTGAAGCT 59.586 40.000 0.00 0.00 38.25 3.74
3761 3823 6.595716 GCTATTCTTTCAGGAAGTTGAAGCTA 59.404 38.462 0.00 0.00 38.25 3.32
3762 3824 7.281999 GCTATTCTTTCAGGAAGTTGAAGCTAT 59.718 37.037 0.00 0.00 38.25 2.97
3763 3825 9.823647 CTATTCTTTCAGGAAGTTGAAGCTATA 57.176 33.333 0.00 0.00 38.25 1.31
3765 3827 8.498054 TTCTTTCAGGAAGTTGAAGCTATATG 57.502 34.615 0.00 0.00 38.25 1.78
3768 3830 9.383519 CTTTCAGGAAGTTGAAGCTATATGTTA 57.616 33.333 0.00 0.00 38.25 2.41
3769 3831 9.905713 TTTCAGGAAGTTGAAGCTATATGTTAT 57.094 29.630 0.00 0.00 38.25 1.89
3795 3857 3.507622 AGTCTGCCCAGCTTTGATTAAAC 59.492 43.478 0.00 0.00 0.00 2.01
3799 3861 2.995939 GCCCAGCTTTGATTAAACAAGC 59.004 45.455 8.04 8.04 0.00 4.01
3804 3866 4.687483 CAGCTTTGATTAAACAAGCCAAGG 59.313 41.667 11.18 0.00 0.00 3.61
3806 3868 4.686091 GCTTTGATTAAACAAGCCAAGGAC 59.314 41.667 0.00 0.00 0.00 3.85
3814 3876 1.073199 AAGCCAAGGACCAGGAACG 59.927 57.895 7.15 0.00 0.00 3.95
3833 3895 4.329545 GGGAGTTGCCGCTGGACA 62.330 66.667 0.00 0.00 37.63 4.02
3834 3896 2.045926 GGAGTTGCCGCTGGACAT 60.046 61.111 0.00 0.00 0.00 3.06
3835 3897 2.401766 GGAGTTGCCGCTGGACATG 61.402 63.158 0.00 0.00 0.00 3.21
3836 3898 1.672356 GAGTTGCCGCTGGACATGT 60.672 57.895 0.00 0.00 0.00 3.21
3837 3899 0.391130 GAGTTGCCGCTGGACATGTA 60.391 55.000 0.00 0.00 0.00 2.29
3838 3900 0.036164 AGTTGCCGCTGGACATGTAA 59.964 50.000 0.00 0.00 0.00 2.41
3839 3901 0.878416 GTTGCCGCTGGACATGTAAA 59.122 50.000 0.00 0.00 0.00 2.01
3840 3902 1.472480 GTTGCCGCTGGACATGTAAAT 59.528 47.619 0.00 0.00 0.00 1.40
3841 3903 2.680841 GTTGCCGCTGGACATGTAAATA 59.319 45.455 0.00 0.00 0.00 1.40
3842 3904 3.207265 TGCCGCTGGACATGTAAATAT 57.793 42.857 0.00 0.00 0.00 1.28
3843 3905 2.877786 TGCCGCTGGACATGTAAATATG 59.122 45.455 0.00 0.00 0.00 1.78
3844 3906 2.878406 GCCGCTGGACATGTAAATATGT 59.122 45.455 0.00 0.00 43.61 2.29
3845 3907 4.062293 GCCGCTGGACATGTAAATATGTA 58.938 43.478 0.00 0.00 41.15 2.29
3846 3908 4.695455 GCCGCTGGACATGTAAATATGTAT 59.305 41.667 0.00 0.00 41.15 2.29
3847 3909 5.163854 GCCGCTGGACATGTAAATATGTATC 60.164 44.000 0.00 0.00 41.15 2.24
3848 3910 5.931724 CCGCTGGACATGTAAATATGTATCA 59.068 40.000 0.00 0.00 41.15 2.15
3849 3911 6.091305 CCGCTGGACATGTAAATATGTATCAG 59.909 42.308 0.00 13.41 41.15 2.90
3850 3912 6.091305 CGCTGGACATGTAAATATGTATCAGG 59.909 42.308 0.00 8.86 41.15 3.86
3851 3913 6.936900 GCTGGACATGTAAATATGTATCAGGT 59.063 38.462 0.00 0.00 41.15 4.00
3852 3914 7.095060 GCTGGACATGTAAATATGTATCAGGTG 60.095 40.741 0.00 0.00 41.15 4.00
3853 3915 6.710295 TGGACATGTAAATATGTATCAGGTGC 59.290 38.462 0.00 0.00 41.15 5.01
3854 3916 6.128553 GGACATGTAAATATGTATCAGGTGCG 60.129 42.308 0.00 0.00 41.15 5.34
3855 3917 6.288294 ACATGTAAATATGTATCAGGTGCGT 58.712 36.000 0.00 0.00 39.40 5.24
3856 3918 7.438564 ACATGTAAATATGTATCAGGTGCGTA 58.561 34.615 0.00 0.00 39.40 4.42
3857 3919 8.094548 ACATGTAAATATGTATCAGGTGCGTAT 58.905 33.333 0.00 0.00 39.40 3.06
3858 3920 9.581099 CATGTAAATATGTATCAGGTGCGTATA 57.419 33.333 0.00 0.00 0.00 1.47
3860 3922 9.797556 TGTAAATATGTATCAGGTGCGTATATC 57.202 33.333 0.00 0.00 0.00 1.63
3861 3923 9.797556 GTAAATATGTATCAGGTGCGTATATCA 57.202 33.333 0.00 0.00 0.00 2.15
3862 3924 8.703604 AAATATGTATCAGGTGCGTATATCAC 57.296 34.615 0.88 0.88 0.00 3.06
3870 3932 1.195448 GTGCGTATATCACCAGCATGC 59.805 52.381 10.51 10.51 40.11 4.06
3871 3933 1.070601 TGCGTATATCACCAGCATGCT 59.929 47.619 16.30 16.30 32.43 3.79
3872 3934 2.298729 TGCGTATATCACCAGCATGCTA 59.701 45.455 22.19 4.85 32.43 3.49
3873 3935 3.244044 TGCGTATATCACCAGCATGCTAA 60.244 43.478 22.19 6.81 32.43 3.09
3874 3936 3.123621 GCGTATATCACCAGCATGCTAAC 59.876 47.826 22.19 7.57 31.97 2.34
3875 3937 4.306600 CGTATATCACCAGCATGCTAACA 58.693 43.478 22.19 5.01 31.97 2.41
3876 3938 4.931601 CGTATATCACCAGCATGCTAACAT 59.068 41.667 22.19 12.29 36.79 2.71
3877 3939 6.099341 CGTATATCACCAGCATGCTAACATA 58.901 40.000 22.19 14.03 33.67 2.29
3878 3940 6.589907 CGTATATCACCAGCATGCTAACATAA 59.410 38.462 22.19 5.62 33.67 1.90
3879 3941 7.201470 CGTATATCACCAGCATGCTAACATAAG 60.201 40.741 22.19 5.88 33.67 1.73
3880 3942 3.544684 TCACCAGCATGCTAACATAAGG 58.455 45.455 22.19 17.72 33.67 2.69
3881 3943 2.033801 CACCAGCATGCTAACATAAGGC 59.966 50.000 22.19 0.00 33.67 4.35
3882 3944 1.610522 CCAGCATGCTAACATAAGGCC 59.389 52.381 22.19 0.00 33.67 5.19
3883 3945 2.579873 CAGCATGCTAACATAAGGCCT 58.420 47.619 22.19 0.00 33.67 5.19
3884 3946 2.292569 CAGCATGCTAACATAAGGCCTG 59.707 50.000 22.19 0.00 33.67 4.85
3885 3947 1.610522 GCATGCTAACATAAGGCCTGG 59.389 52.381 5.69 0.97 33.67 4.45
3886 3948 2.936202 CATGCTAACATAAGGCCTGGT 58.064 47.619 5.69 1.77 33.67 4.00
3887 3949 3.290710 CATGCTAACATAAGGCCTGGTT 58.709 45.455 5.69 14.39 33.67 3.67
3888 3950 3.449746 TGCTAACATAAGGCCTGGTTT 57.550 42.857 19.20 8.32 0.00 3.27
3889 3951 3.773560 TGCTAACATAAGGCCTGGTTTT 58.226 40.909 19.20 8.64 0.00 2.43
3890 3952 4.924625 TGCTAACATAAGGCCTGGTTTTA 58.075 39.130 19.20 9.24 0.00 1.52
3891 3953 5.326069 TGCTAACATAAGGCCTGGTTTTAA 58.674 37.500 19.20 5.00 0.00 1.52
3892 3954 5.417580 TGCTAACATAAGGCCTGGTTTTAAG 59.582 40.000 19.20 13.22 0.00 1.85
3893 3955 5.650703 GCTAACATAAGGCCTGGTTTTAAGA 59.349 40.000 19.20 4.41 0.00 2.10
3894 3956 6.183360 GCTAACATAAGGCCTGGTTTTAAGAG 60.183 42.308 19.20 12.67 0.00 2.85
3895 3957 5.256806 ACATAAGGCCTGGTTTTAAGAGT 57.743 39.130 5.69 0.00 0.00 3.24
3896 3958 5.641155 ACATAAGGCCTGGTTTTAAGAGTT 58.359 37.500 5.69 0.00 0.00 3.01
3897 3959 6.075315 ACATAAGGCCTGGTTTTAAGAGTTT 58.925 36.000 5.69 0.00 0.00 2.66
3898 3960 6.553476 ACATAAGGCCTGGTTTTAAGAGTTTT 59.447 34.615 5.69 0.00 0.00 2.43
3899 3961 7.726738 ACATAAGGCCTGGTTTTAAGAGTTTTA 59.273 33.333 5.69 0.00 0.00 1.52
3900 3962 6.650427 AAGGCCTGGTTTTAAGAGTTTTAG 57.350 37.500 5.69 0.00 0.00 1.85
3901 3963 4.523173 AGGCCTGGTTTTAAGAGTTTTAGC 59.477 41.667 3.11 0.00 0.00 3.09
3902 3964 4.523173 GGCCTGGTTTTAAGAGTTTTAGCT 59.477 41.667 0.00 0.00 0.00 3.32
3903 3965 5.708697 GGCCTGGTTTTAAGAGTTTTAGCTA 59.291 40.000 0.00 0.00 0.00 3.32
3904 3966 6.127980 GGCCTGGTTTTAAGAGTTTTAGCTAG 60.128 42.308 0.00 0.00 0.00 3.42
3905 3967 6.653740 GCCTGGTTTTAAGAGTTTTAGCTAGA 59.346 38.462 0.00 0.00 0.00 2.43
3906 3968 7.337184 GCCTGGTTTTAAGAGTTTTAGCTAGAT 59.663 37.037 0.00 0.00 0.00 1.98
3907 3969 8.884726 CCTGGTTTTAAGAGTTTTAGCTAGATC 58.115 37.037 0.00 0.00 0.00 2.75
3908 3970 8.788325 TGGTTTTAAGAGTTTTAGCTAGATCC 57.212 34.615 0.00 0.00 0.00 3.36
3909 3971 8.603304 TGGTTTTAAGAGTTTTAGCTAGATCCT 58.397 33.333 0.00 0.00 0.00 3.24
3910 3972 9.451002 GGTTTTAAGAGTTTTAGCTAGATCCTT 57.549 33.333 0.00 0.00 0.00 3.36
3914 3976 6.724893 AGAGTTTTAGCTAGATCCTTCTCC 57.275 41.667 0.00 0.00 33.17 3.71
3915 3977 5.600898 AGAGTTTTAGCTAGATCCTTCTCCC 59.399 44.000 0.00 0.00 33.17 4.30
3916 3978 5.534070 AGTTTTAGCTAGATCCTTCTCCCT 58.466 41.667 0.00 0.00 33.17 4.20
3917 3979 5.967551 AGTTTTAGCTAGATCCTTCTCCCTT 59.032 40.000 0.00 0.00 33.17 3.95
3918 3980 6.445462 AGTTTTAGCTAGATCCTTCTCCCTTT 59.555 38.462 0.00 0.00 33.17 3.11
3919 3981 6.893020 TTTAGCTAGATCCTTCTCCCTTTT 57.107 37.500 0.00 0.00 33.17 2.27
3920 3982 7.989947 TTTAGCTAGATCCTTCTCCCTTTTA 57.010 36.000 0.00 0.00 33.17 1.52
3921 3983 8.568617 TTTAGCTAGATCCTTCTCCCTTTTAT 57.431 34.615 0.00 0.00 33.17 1.40
3922 3984 6.432403 AGCTAGATCCTTCTCCCTTTTATG 57.568 41.667 0.00 0.00 33.17 1.90
3923 3985 6.146760 AGCTAGATCCTTCTCCCTTTTATGA 58.853 40.000 0.00 0.00 33.17 2.15
3924 3986 6.791969 AGCTAGATCCTTCTCCCTTTTATGAT 59.208 38.462 0.00 0.00 33.17 2.45
3925 3987 6.878389 GCTAGATCCTTCTCCCTTTTATGATG 59.122 42.308 0.00 0.00 33.17 3.07
3926 3988 5.629125 AGATCCTTCTCCCTTTTATGATGC 58.371 41.667 0.00 0.00 0.00 3.91
3927 3989 4.860802 TCCTTCTCCCTTTTATGATGCA 57.139 40.909 0.00 0.00 0.00 3.96
3928 3990 5.393068 TCCTTCTCCCTTTTATGATGCAT 57.607 39.130 0.00 0.00 0.00 3.96
3929 3991 5.135383 TCCTTCTCCCTTTTATGATGCATG 58.865 41.667 2.46 0.00 0.00 4.06
3930 3992 4.891756 CCTTCTCCCTTTTATGATGCATGT 59.108 41.667 2.46 0.00 0.00 3.21
3931 3993 6.064060 CCTTCTCCCTTTTATGATGCATGTA 58.936 40.000 2.46 0.00 0.00 2.29
3932 3994 6.016777 CCTTCTCCCTTTTATGATGCATGTAC 60.017 42.308 2.46 0.00 0.00 2.90
3933 3995 6.252599 TCTCCCTTTTATGATGCATGTACT 57.747 37.500 2.46 0.00 0.00 2.73
3934 3996 6.057533 TCTCCCTTTTATGATGCATGTACTG 58.942 40.000 2.46 0.00 0.00 2.74
3935 3997 6.000246 TCCCTTTTATGATGCATGTACTGA 58.000 37.500 2.46 0.00 0.00 3.41
3936 3998 6.604171 TCCCTTTTATGATGCATGTACTGAT 58.396 36.000 2.46 0.00 0.00 2.90
3937 3999 7.744733 TCCCTTTTATGATGCATGTACTGATA 58.255 34.615 2.46 0.00 0.00 2.15
3938 4000 7.661437 TCCCTTTTATGATGCATGTACTGATAC 59.339 37.037 2.46 0.00 0.00 2.24
3939 4001 7.445096 CCCTTTTATGATGCATGTACTGATACA 59.555 37.037 2.46 0.00 45.37 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
219 220 3.405805 ACCCCCTATACCGGATACCTTTA 59.594 47.826 9.46 0.00 0.00 1.85
262 263 7.311408 GGTATACCACTATCACCTATCGAAAC 58.689 42.308 17.44 0.00 35.64 2.78
455 456 2.484264 GTGCTTATTGCTTTGTCGGAGT 59.516 45.455 0.00 0.00 43.37 3.85
572 573 9.607988 TTTTCTAATGCTATCCAAAGACGAATA 57.392 29.630 0.00 0.00 0.00 1.75
705 706 2.877097 TCAGGCATTGGCAAAGAGTA 57.123 45.000 13.20 0.00 43.71 2.59
724 725 4.767409 GCAGAAAGTAGGAAACCAAGGAAT 59.233 41.667 0.00 0.00 0.00 3.01
832 833 2.078958 GATACAAACGCTCGCTCGCC 62.079 60.000 0.00 0.00 0.00 5.54
833 834 1.140407 AGATACAAACGCTCGCTCGC 61.140 55.000 0.00 0.00 0.00 5.03
834 835 1.269166 AAGATACAAACGCTCGCTCG 58.731 50.000 0.00 0.00 0.00 5.03
835 836 3.724295 AAAAGATACAAACGCTCGCTC 57.276 42.857 0.00 0.00 0.00 5.03
836 837 3.496884 TGAAAAAGATACAAACGCTCGCT 59.503 39.130 0.00 0.00 0.00 4.93
837 838 3.805823 TGAAAAAGATACAAACGCTCGC 58.194 40.909 0.00 0.00 0.00 5.03
838 839 4.840772 CACTGAAAAAGATACAAACGCTCG 59.159 41.667 0.00 0.00 0.00 5.03
839 840 4.613031 GCACTGAAAAAGATACAAACGCTC 59.387 41.667 0.00 0.00 0.00 5.03
840 841 4.036262 TGCACTGAAAAAGATACAAACGCT 59.964 37.500 0.00 0.00 0.00 5.07
841 842 4.286910 TGCACTGAAAAAGATACAAACGC 58.713 39.130 0.00 0.00 0.00 4.84
842 843 5.510671 ACTGCACTGAAAAAGATACAAACG 58.489 37.500 0.00 0.00 0.00 3.60
843 844 8.129211 ACTTACTGCACTGAAAAAGATACAAAC 58.871 33.333 0.00 0.00 0.00 2.93
844 845 8.220755 ACTTACTGCACTGAAAAAGATACAAA 57.779 30.769 0.00 0.00 0.00 2.83
845 846 7.801716 ACTTACTGCACTGAAAAAGATACAA 57.198 32.000 0.00 0.00 0.00 2.41
846 847 8.896320 TTACTTACTGCACTGAAAAAGATACA 57.104 30.769 0.00 0.00 0.00 2.29
847 848 9.760660 CATTACTTACTGCACTGAAAAAGATAC 57.239 33.333 0.00 0.00 0.00 2.24
848 849 8.450964 GCATTACTTACTGCACTGAAAAAGATA 58.549 33.333 0.00 0.00 38.28 1.98
849 850 7.175641 AGCATTACTTACTGCACTGAAAAAGAT 59.824 33.333 1.93 0.00 40.88 2.40
850 851 6.486657 AGCATTACTTACTGCACTGAAAAAGA 59.513 34.615 1.93 0.00 40.88 2.52
851 852 6.672147 AGCATTACTTACTGCACTGAAAAAG 58.328 36.000 1.93 0.00 40.88 2.27
852 853 6.633500 AGCATTACTTACTGCACTGAAAAA 57.367 33.333 1.93 0.00 40.88 1.94
853 854 6.437928 CAAGCATTACTTACTGCACTGAAAA 58.562 36.000 1.93 0.00 40.88 2.29
854 855 5.048782 CCAAGCATTACTTACTGCACTGAAA 60.049 40.000 1.93 0.00 40.88 2.69
855 856 4.455533 CCAAGCATTACTTACTGCACTGAA 59.544 41.667 1.93 0.00 40.88 3.02
856 857 4.002982 CCAAGCATTACTTACTGCACTGA 58.997 43.478 1.93 0.00 40.88 3.41
857 858 4.002982 TCCAAGCATTACTTACTGCACTG 58.997 43.478 1.93 0.00 40.88 3.66
858 859 4.003648 GTCCAAGCATTACTTACTGCACT 58.996 43.478 1.93 0.00 40.88 4.40
859 860 4.003648 AGTCCAAGCATTACTTACTGCAC 58.996 43.478 1.93 0.00 40.88 4.57
860 861 4.286297 AGTCCAAGCATTACTTACTGCA 57.714 40.909 1.93 0.00 40.88 4.41
861 862 6.737254 TTAAGTCCAAGCATTACTTACTGC 57.263 37.500 0.00 0.00 36.04 4.40
862 863 8.552034 GCTATTAAGTCCAAGCATTACTTACTG 58.448 37.037 0.00 0.00 36.04 2.74
863 864 8.487028 AGCTATTAAGTCCAAGCATTACTTACT 58.513 33.333 0.00 0.00 36.04 2.24
864 865 8.664211 AGCTATTAAGTCCAAGCATTACTTAC 57.336 34.615 0.00 0.00 36.04 2.34
865 866 9.109393 CAAGCTATTAAGTCCAAGCATTACTTA 57.891 33.333 0.00 0.00 36.04 2.24
866 867 7.415653 GCAAGCTATTAAGTCCAAGCATTACTT 60.416 37.037 0.00 0.00 40.05 2.24
867 868 6.038714 GCAAGCTATTAAGTCCAAGCATTACT 59.961 38.462 0.00 0.00 37.44 2.24
868 869 6.038714 AGCAAGCTATTAAGTCCAAGCATTAC 59.961 38.462 0.00 0.00 37.44 1.89
869 870 6.122277 AGCAAGCTATTAAGTCCAAGCATTA 58.878 36.000 0.00 0.00 37.44 1.90
870 871 4.952335 AGCAAGCTATTAAGTCCAAGCATT 59.048 37.500 0.00 0.00 37.44 3.56
871 872 4.530875 AGCAAGCTATTAAGTCCAAGCAT 58.469 39.130 0.00 0.00 37.44 3.79
872 873 3.955471 AGCAAGCTATTAAGTCCAAGCA 58.045 40.909 0.00 0.00 37.44 3.91
873 874 4.396166 TGAAGCAAGCTATTAAGTCCAAGC 59.604 41.667 0.00 0.00 35.16 4.01
874 875 6.690194 ATGAAGCAAGCTATTAAGTCCAAG 57.310 37.500 0.00 0.00 0.00 3.61
875 876 7.176515 TCAAATGAAGCAAGCTATTAAGTCCAA 59.823 33.333 0.00 0.00 0.00 3.53
876 877 6.658816 TCAAATGAAGCAAGCTATTAAGTCCA 59.341 34.615 0.00 0.00 0.00 4.02
877 878 7.088589 TCAAATGAAGCAAGCTATTAAGTCC 57.911 36.000 0.00 0.00 0.00 3.85
878 879 9.230932 GAATCAAATGAAGCAAGCTATTAAGTC 57.769 33.333 0.00 0.00 0.00 3.01
879 880 7.912250 CGAATCAAATGAAGCAAGCTATTAAGT 59.088 33.333 0.00 0.00 0.00 2.24
880 881 7.096722 GCGAATCAAATGAAGCAAGCTATTAAG 60.097 37.037 0.00 0.00 0.00 1.85
881 882 6.692681 GCGAATCAAATGAAGCAAGCTATTAA 59.307 34.615 0.00 0.00 0.00 1.40
882 883 6.038603 AGCGAATCAAATGAAGCAAGCTATTA 59.961 34.615 0.00 0.00 0.00 0.98
883 884 5.039333 GCGAATCAAATGAAGCAAGCTATT 58.961 37.500 0.00 0.00 0.00 1.73
884 885 4.337555 AGCGAATCAAATGAAGCAAGCTAT 59.662 37.500 0.00 0.00 0.00 2.97
885 886 3.691118 AGCGAATCAAATGAAGCAAGCTA 59.309 39.130 0.00 0.00 0.00 3.32
886 887 2.490903 AGCGAATCAAATGAAGCAAGCT 59.509 40.909 10.11 0.00 0.00 3.74
887 888 2.872370 AGCGAATCAAATGAAGCAAGC 58.128 42.857 10.11 0.00 0.00 4.01
888 889 5.403166 TGAAAAGCGAATCAAATGAAGCAAG 59.597 36.000 10.11 0.00 0.00 4.01
889 890 5.288015 TGAAAAGCGAATCAAATGAAGCAA 58.712 33.333 10.11 0.00 0.00 3.91
890 891 4.869215 TGAAAAGCGAATCAAATGAAGCA 58.131 34.783 10.11 0.00 0.00 3.91
891 892 4.325472 CCTGAAAAGCGAATCAAATGAAGC 59.675 41.667 0.00 0.00 0.00 3.86
892 893 4.325472 GCCTGAAAAGCGAATCAAATGAAG 59.675 41.667 0.00 0.00 0.00 3.02
893 894 4.022068 AGCCTGAAAAGCGAATCAAATGAA 60.022 37.500 0.00 0.00 34.64 2.57
894 895 3.507233 AGCCTGAAAAGCGAATCAAATGA 59.493 39.130 0.00 0.00 34.64 2.57
895 896 3.611113 CAGCCTGAAAAGCGAATCAAATG 59.389 43.478 0.00 0.00 34.64 2.32
896 897 3.256631 ACAGCCTGAAAAGCGAATCAAAT 59.743 39.130 0.00 0.00 34.64 2.32
897 898 2.622942 ACAGCCTGAAAAGCGAATCAAA 59.377 40.909 0.00 0.00 34.64 2.69
898 899 2.229792 ACAGCCTGAAAAGCGAATCAA 58.770 42.857 0.00 0.00 34.64 2.57
899 900 1.896220 ACAGCCTGAAAAGCGAATCA 58.104 45.000 0.00 0.00 34.64 2.57
900 901 3.262420 TCTACAGCCTGAAAAGCGAATC 58.738 45.455 0.00 0.00 34.64 2.52
901 902 3.334583 TCTACAGCCTGAAAAGCGAAT 57.665 42.857 0.00 0.00 34.64 3.34
902 903 2.831685 TCTACAGCCTGAAAAGCGAA 57.168 45.000 0.00 0.00 34.64 4.70
903 904 3.002791 CAATCTACAGCCTGAAAAGCGA 58.997 45.455 0.00 0.00 34.64 4.93
904 905 3.002791 TCAATCTACAGCCTGAAAAGCG 58.997 45.455 0.00 0.00 34.64 4.68
905 906 4.006319 AGTCAATCTACAGCCTGAAAAGC 58.994 43.478 0.00 0.00 0.00 3.51
906 907 5.121454 GTCAGTCAATCTACAGCCTGAAAAG 59.879 44.000 0.00 0.00 31.38 2.27
907 908 4.997395 GTCAGTCAATCTACAGCCTGAAAA 59.003 41.667 0.00 0.00 31.38 2.29
908 909 4.040339 TGTCAGTCAATCTACAGCCTGAAA 59.960 41.667 0.00 0.00 31.38 2.69
909 910 3.578282 TGTCAGTCAATCTACAGCCTGAA 59.422 43.478 0.00 0.00 31.38 3.02
910 911 3.056536 GTGTCAGTCAATCTACAGCCTGA 60.057 47.826 0.00 0.00 0.00 3.86
911 912 3.257393 GTGTCAGTCAATCTACAGCCTG 58.743 50.000 0.00 0.00 0.00 4.85
912 913 2.094494 CGTGTCAGTCAATCTACAGCCT 60.094 50.000 0.00 0.00 0.00 4.58
913 914 2.094700 TCGTGTCAGTCAATCTACAGCC 60.095 50.000 0.00 0.00 0.00 4.85
914 915 3.217599 TCGTGTCAGTCAATCTACAGC 57.782 47.619 0.00 0.00 0.00 4.40
915 916 3.604198 CGTTCGTGTCAGTCAATCTACAG 59.396 47.826 0.00 0.00 0.00 2.74
916 917 3.251487 TCGTTCGTGTCAGTCAATCTACA 59.749 43.478 0.00 0.00 0.00 2.74
917 918 3.818387 TCGTTCGTGTCAGTCAATCTAC 58.182 45.455 0.00 0.00 0.00 2.59
918 919 3.501062 ACTCGTTCGTGTCAGTCAATCTA 59.499 43.478 0.00 0.00 0.00 1.98
919 920 2.293677 ACTCGTTCGTGTCAGTCAATCT 59.706 45.455 0.00 0.00 0.00 2.40
920 921 2.657372 GACTCGTTCGTGTCAGTCAATC 59.343 50.000 18.11 0.00 36.15 2.67
921 922 2.034179 TGACTCGTTCGTGTCAGTCAAT 59.966 45.455 20.62 0.00 41.78 2.57
922 923 1.402613 TGACTCGTTCGTGTCAGTCAA 59.597 47.619 20.62 3.96 41.78 3.18
923 924 1.018910 TGACTCGTTCGTGTCAGTCA 58.981 50.000 20.62 14.95 42.34 3.41
924 925 1.002684 AGTGACTCGTTCGTGTCAGTC 60.003 52.381 23.54 15.76 41.38 3.51
925 926 1.022735 AGTGACTCGTTCGTGTCAGT 58.977 50.000 23.54 23.22 42.84 3.41
926 927 1.399572 CAGTGACTCGTTCGTGTCAG 58.600 55.000 23.54 13.37 42.84 3.51
927 928 0.594028 GCAGTGACTCGTTCGTGTCA 60.594 55.000 20.62 20.62 40.39 3.58
928 929 0.594028 TGCAGTGACTCGTTCGTGTC 60.594 55.000 16.78 16.78 0.00 3.67
929 930 0.032130 ATGCAGTGACTCGTTCGTGT 59.968 50.000 0.00 0.00 0.00 4.49
930 931 1.125021 GAATGCAGTGACTCGTTCGTG 59.875 52.381 0.00 0.00 0.00 4.35
931 932 1.419374 GAATGCAGTGACTCGTTCGT 58.581 50.000 0.00 0.00 0.00 3.85
932 933 0.363512 CGAATGCAGTGACTCGTTCG 59.636 55.000 17.89 17.89 42.66 3.95
933 934 1.698165 TCGAATGCAGTGACTCGTTC 58.302 50.000 0.00 6.82 33.15 3.95
934 935 2.370281 ATCGAATGCAGTGACTCGTT 57.630 45.000 0.00 0.00 33.15 3.85
935 936 2.263077 GAATCGAATGCAGTGACTCGT 58.737 47.619 0.00 0.00 33.15 4.18
936 937 1.253800 CGAATCGAATGCAGTGACTCG 59.746 52.381 0.00 0.00 0.00 4.18
937 938 2.280183 GTCGAATCGAATGCAGTGACTC 59.720 50.000 7.01 0.00 37.72 3.36
938 939 2.263077 GTCGAATCGAATGCAGTGACT 58.737 47.619 7.01 0.00 37.72 3.41
939 940 1.992667 TGTCGAATCGAATGCAGTGAC 59.007 47.619 7.01 0.00 37.72 3.67
940 941 2.362169 TGTCGAATCGAATGCAGTGA 57.638 45.000 7.01 0.00 37.72 3.41
941 942 2.474526 GGTTGTCGAATCGAATGCAGTG 60.475 50.000 7.01 0.00 37.72 3.66
942 943 1.732259 GGTTGTCGAATCGAATGCAGT 59.268 47.619 7.01 0.00 37.72 4.40
943 944 2.002586 AGGTTGTCGAATCGAATGCAG 58.997 47.619 7.01 0.00 37.72 4.41
944 945 1.999735 GAGGTTGTCGAATCGAATGCA 59.000 47.619 7.01 0.00 37.72 3.96
945 946 1.327764 GGAGGTTGTCGAATCGAATGC 59.672 52.381 7.01 0.00 37.72 3.56
946 947 2.616960 TGGAGGTTGTCGAATCGAATG 58.383 47.619 7.01 0.00 37.72 2.67
947 948 3.198068 CATGGAGGTTGTCGAATCGAAT 58.802 45.455 7.01 0.00 37.72 3.34
948 949 2.616960 CATGGAGGTTGTCGAATCGAA 58.383 47.619 7.01 0.00 37.72 3.71
949 950 1.739035 GCATGGAGGTTGTCGAATCGA 60.739 52.381 0.00 0.00 0.00 3.59
950 951 0.652592 GCATGGAGGTTGTCGAATCG 59.347 55.000 0.00 0.00 0.00 3.34
951 952 1.667724 CAGCATGGAGGTTGTCGAATC 59.332 52.381 0.00 0.00 0.00 2.52
952 953 1.278985 TCAGCATGGAGGTTGTCGAAT 59.721 47.619 0.00 0.00 36.16 3.34
953 954 0.684535 TCAGCATGGAGGTTGTCGAA 59.315 50.000 0.00 0.00 36.16 3.71
954 955 0.684535 TTCAGCATGGAGGTTGTCGA 59.315 50.000 0.00 0.00 36.16 4.20
955 956 1.742761 ATTCAGCATGGAGGTTGTCG 58.257 50.000 0.00 0.00 36.16 4.35
956 957 3.084039 TCAATTCAGCATGGAGGTTGTC 58.916 45.455 0.00 0.00 36.16 3.18
957 958 2.821969 GTCAATTCAGCATGGAGGTTGT 59.178 45.455 0.00 0.00 36.16 3.32
958 959 2.821378 TGTCAATTCAGCATGGAGGTTG 59.179 45.455 0.00 0.00 36.16 3.77
959 960 3.087031 CTGTCAATTCAGCATGGAGGTT 58.913 45.455 0.00 0.00 36.16 3.50
960 961 2.306805 TCTGTCAATTCAGCATGGAGGT 59.693 45.455 0.00 0.00 36.16 3.85
961 962 2.943690 CTCTGTCAATTCAGCATGGAGG 59.056 50.000 0.00 0.00 36.16 4.30
962 963 2.355132 GCTCTGTCAATTCAGCATGGAG 59.645 50.000 0.00 0.00 36.16 3.86
963 964 2.362736 GCTCTGTCAATTCAGCATGGA 58.637 47.619 0.00 0.00 36.16 3.41
964 965 1.404391 GGCTCTGTCAATTCAGCATGG 59.596 52.381 0.00 0.00 36.16 3.66
965 966 2.089201 TGGCTCTGTCAATTCAGCATG 58.911 47.619 0.00 0.00 35.63 4.06
970 971 1.881973 GTTGCTGGCTCTGTCAATTCA 59.118 47.619 0.00 0.00 0.00 2.57
984 985 1.033746 CCATAGCCCCAGTGTTGCTG 61.034 60.000 12.51 0.17 44.63 4.41
1005 1007 1.968017 CACATTCACCACAGCCGCT 60.968 57.895 0.00 0.00 0.00 5.52
1019 1021 3.661648 GGACCCCTGTGGCCACAT 61.662 66.667 37.66 24.01 41.01 3.21
1077 1079 1.804748 CCCTTGAAACGCTTGTACTCC 59.195 52.381 0.00 0.00 0.00 3.85
1103 1105 1.187087 GAGGAACCTGATGTCCTCGT 58.813 55.000 4.06 0.00 39.26 4.18
1125 1127 1.074405 TGCATGGCCTCAAGTTCTTCT 59.926 47.619 3.32 0.00 0.00 2.85
1128 1130 0.111061 TGTGCATGGCCTCAAGTTCT 59.889 50.000 3.32 0.00 0.00 3.01
1147 1149 5.344743 TCTGATATTTTGAGGAGAAGCGT 57.655 39.130 0.00 0.00 0.00 5.07
1164 1166 1.290431 TCAGGCTCTTCCTCCTCTGAT 59.710 52.381 0.00 0.00 45.52 2.90
1179 1184 1.672881 ACTTTATCTTGCGCATCAGGC 59.327 47.619 12.75 0.00 39.90 4.85
1208 1213 1.986757 GAGAGCTCCCTCACTGCCA 60.987 63.158 10.93 0.00 40.68 4.92
1231 1236 3.055167 TCATCGATGGTGTCTTCCATGTT 60.055 43.478 24.61 0.00 46.72 2.71
1270 1275 4.973168 TCTGGCTTAGTGTCTTTGTCATT 58.027 39.130 0.00 0.00 0.00 2.57
1380 1385 5.221322 GCTCACCTCAAGGATTTGTTTCTTT 60.221 40.000 2.30 0.00 38.94 2.52
1393 1398 0.891373 TTCCTCTCGCTCACCTCAAG 59.109 55.000 0.00 0.00 0.00 3.02
1461 1466 1.939255 GCAAGAGCTCTAGCATCAACC 59.061 52.381 18.59 0.00 45.16 3.77
1512 1517 4.591321 ATCAGCCTTGGGTTCTTCAATA 57.409 40.909 0.00 0.00 0.00 1.90
1518 1523 7.816411 ACTTAATTATATCAGCCTTGGGTTCT 58.184 34.615 0.00 0.00 0.00 3.01
1533 1538 8.726988 GCACCTTCAGTCAACAACTTAATTATA 58.273 33.333 0.00 0.00 35.45 0.98
1775 1801 3.228749 GCATTCATGACGACTTGTTGTG 58.771 45.455 0.00 0.00 0.00 3.33
1786 1812 3.968649 ACTTGTTGTGTGCATTCATGAC 58.031 40.909 0.00 0.00 0.00 3.06
1795 1821 3.435327 TCAATATCCGACTTGTTGTGTGC 59.565 43.478 0.00 0.00 0.00 4.57
1796 1822 5.605564 TTCAATATCCGACTTGTTGTGTG 57.394 39.130 0.00 0.00 0.00 3.82
1797 1823 6.655003 AGAATTCAATATCCGACTTGTTGTGT 59.345 34.615 8.44 0.00 0.00 3.72
1798 1824 7.076842 AGAATTCAATATCCGACTTGTTGTG 57.923 36.000 8.44 0.00 0.00 3.33
1799 1825 7.174946 ACAAGAATTCAATATCCGACTTGTTGT 59.825 33.333 8.44 11.51 42.12 3.32
1800 1826 7.482743 CACAAGAATTCAATATCCGACTTGTTG 59.517 37.037 8.44 10.68 42.63 3.33
1801 1827 7.530010 CACAAGAATTCAATATCCGACTTGTT 58.470 34.615 8.44 0.00 42.63 2.83
1802 1828 6.403636 GCACAAGAATTCAATATCCGACTTGT 60.404 38.462 8.44 0.00 44.40 3.16
1803 1829 5.967674 GCACAAGAATTCAATATCCGACTTG 59.032 40.000 8.44 0.00 39.17 3.16
1804 1830 5.647658 TGCACAAGAATTCAATATCCGACTT 59.352 36.000 8.44 0.00 0.00 3.01
1805 1831 5.185454 TGCACAAGAATTCAATATCCGACT 58.815 37.500 8.44 0.00 0.00 4.18
1806 1832 5.484173 TGCACAAGAATTCAATATCCGAC 57.516 39.130 8.44 0.00 0.00 4.79
1807 1833 4.576053 CCTGCACAAGAATTCAATATCCGA 59.424 41.667 8.44 0.00 0.00 4.55
1808 1834 4.336433 ACCTGCACAAGAATTCAATATCCG 59.664 41.667 8.44 0.00 0.00 4.18
1809 1835 5.841957 ACCTGCACAAGAATTCAATATCC 57.158 39.130 8.44 0.00 0.00 2.59
1810 1836 9.807649 AAAATACCTGCACAAGAATTCAATATC 57.192 29.630 8.44 0.00 0.00 1.63
1811 1837 9.590451 CAAAATACCTGCACAAGAATTCAATAT 57.410 29.630 8.44 0.00 0.00 1.28
1812 1838 8.584157 ACAAAATACCTGCACAAGAATTCAATA 58.416 29.630 8.44 0.00 0.00 1.90
1813 1839 7.444299 ACAAAATACCTGCACAAGAATTCAAT 58.556 30.769 8.44 0.00 0.00 2.57
1814 1840 6.815089 ACAAAATACCTGCACAAGAATTCAA 58.185 32.000 8.44 0.00 0.00 2.69
1815 1841 6.403866 ACAAAATACCTGCACAAGAATTCA 57.596 33.333 8.44 0.00 0.00 2.57
1816 1842 6.701400 ACAACAAAATACCTGCACAAGAATTC 59.299 34.615 0.00 0.00 0.00 2.17
1817 1843 6.581712 ACAACAAAATACCTGCACAAGAATT 58.418 32.000 0.00 0.00 0.00 2.17
1818 1844 6.160576 ACAACAAAATACCTGCACAAGAAT 57.839 33.333 0.00 0.00 0.00 2.40
1819 1845 5.587289 GACAACAAAATACCTGCACAAGAA 58.413 37.500 0.00 0.00 0.00 2.52
1820 1846 4.260990 CGACAACAAAATACCTGCACAAGA 60.261 41.667 0.00 0.00 0.00 3.02
2051 2077 6.129179 TCAAGATATGGAGGACAATTTTCCC 58.871 40.000 7.03 0.00 36.12 3.97
2052 2078 7.557719 TCTTCAAGATATGGAGGACAATTTTCC 59.442 37.037 2.13 2.13 35.11 3.13
2061 2087 8.551440 TCAGAAATTTCTTCAAGATATGGAGGA 58.449 33.333 18.16 4.70 35.11 3.71
2118 2144 9.592196 AAACCAGATATAGCAATGATTACCAAT 57.408 29.630 0.00 0.00 0.00 3.16
2170 2196 4.141287 CCTTTCACTTGGTTCCACATGTA 58.859 43.478 0.00 0.00 0.00 2.29
2192 2218 2.032799 TGAAGTGCACGTCCAATTGAAC 59.967 45.455 26.58 0.00 0.00 3.18
2202 2228 1.404035 GGGTTTCTTTGAAGTGCACGT 59.596 47.619 12.01 8.44 0.00 4.49
2212 2238 3.443976 CTTCAACGGTTGGGTTTCTTTG 58.556 45.455 19.91 0.00 0.00 2.77
2220 2246 1.904287 TCATTCCTTCAACGGTTGGG 58.096 50.000 19.91 14.17 0.00 4.12
2223 2249 8.924511 ATATATTCATCATTCCTTCAACGGTT 57.075 30.769 0.00 0.00 0.00 4.44
2225 2251 7.752239 GCAATATATTCATCATTCCTTCAACGG 59.248 37.037 0.00 0.00 0.00 4.44
2244 2270 9.914834 AGGTCAAAATAACTAAGTGGCAATATA 57.085 29.630 0.00 0.00 0.00 0.86
2251 2277 6.575162 AAGCAGGTCAAAATAACTAAGTGG 57.425 37.500 0.00 0.00 0.00 4.00
2268 2294 5.879223 ACATGTCTTAAGATGAGAAAGCAGG 59.121 40.000 8.75 3.72 30.85 4.85
2283 2309 7.603180 ACTGGCATATAAGAGACATGTCTTA 57.397 36.000 28.46 18.26 42.02 2.10
2332 2358 7.671819 CCACCTCTTTATCAGATCAGTCCTATA 59.328 40.741 0.00 0.00 0.00 1.31
2339 2365 6.496565 ACCTATCCACCTCTTTATCAGATCAG 59.503 42.308 0.00 0.00 0.00 2.90
2351 2377 3.715648 ATCCTTCACCTATCCACCTCT 57.284 47.619 0.00 0.00 0.00 3.69
2383 2409 4.993905 TCATGTACTGTACATCCGACTTG 58.006 43.478 26.17 16.80 45.83 3.16
2387 2413 4.266714 TGTCTCATGTACTGTACATCCGA 58.733 43.478 26.17 21.41 45.83 4.55
2393 2419 3.362706 TCCCCTGTCTCATGTACTGTAC 58.637 50.000 10.98 10.98 0.00 2.90
2412 2438 6.823689 TGAGGAGCTCACTAAAATACATTTCC 59.176 38.462 17.19 0.00 35.39 3.13
2461 2487 6.072008 TCCACTTCACCATATTCATTTGTGTG 60.072 38.462 0.00 0.00 0.00 3.82
2489 2515 5.295292 AGAATTATGTCATGAACTCGGCAAG 59.705 40.000 0.00 0.00 0.00 4.01
2537 2563 8.678199 CAAGGAAAGTAACAAAGTTCTCTTCTT 58.322 33.333 0.00 0.00 32.90 2.52
2567 2593 3.386726 TGTCCCAGTTATCGGAATGGTAG 59.613 47.826 0.00 0.00 0.00 3.18
2579 2605 4.164843 ACTTTGCTTTCTGTCCCAGTTA 57.835 40.909 0.00 0.00 32.61 2.24
2625 2651 6.826893 ATTGTTGGATTTTCTTGTTTGACG 57.173 33.333 0.00 0.00 0.00 4.35
2641 2667 3.000727 GACCTTCTGTCGGTATTGTTGG 58.999 50.000 0.00 0.00 34.19 3.77
2675 2701 0.806868 TCCAGACACGGATCGTACAC 59.193 55.000 0.00 0.00 38.32 2.90
2690 2722 1.135575 GCAATTCCACGAAAGCTCCAG 60.136 52.381 0.00 0.00 0.00 3.86
2725 2757 0.807667 AGAACGCGCAGATGCCTAAG 60.808 55.000 5.73 0.00 37.91 2.18
2730 2762 2.815211 TGGAGAACGCGCAGATGC 60.815 61.111 5.73 0.00 37.78 3.91
2739 2771 3.858238 GGAAATCGTCTAAGTGGAGAACG 59.142 47.826 0.00 0.00 0.00 3.95
2751 2783 1.212935 CCCCATCCTTGGAAATCGTCT 59.787 52.381 0.00 0.00 46.92 4.18
2759 2791 0.178846 TTGTCCTCCCCATCCTTGGA 60.179 55.000 0.00 0.00 46.92 3.53
2771 2803 7.607991 TCACTATCCTTTCAAGATTTTGTCCTC 59.392 37.037 0.00 0.00 35.73 3.71
2774 2806 8.787852 ACTTCACTATCCTTTCAAGATTTTGTC 58.212 33.333 0.00 0.00 35.73 3.18
2789 2821 5.305585 TCAACTGGAACAACTTCACTATCC 58.694 41.667 0.00 0.00 38.70 2.59
2790 2822 5.409826 CCTCAACTGGAACAACTTCACTATC 59.590 44.000 0.00 0.00 38.70 2.08
2798 2830 3.046374 AGGTACCTCAACTGGAACAACT 58.954 45.455 9.21 0.00 38.70 3.16
2809 2841 3.090037 GTCTGTAGCTCAGGTACCTCAA 58.910 50.000 12.84 1.99 43.76 3.02
2822 2854 5.303078 TCTCTTATTCCTCCATGTCTGTAGC 59.697 44.000 0.00 0.00 0.00 3.58
2825 2857 4.100808 GCTCTCTTATTCCTCCATGTCTGT 59.899 45.833 0.00 0.00 0.00 3.41
2834 2866 3.571590 TCTGGGAGCTCTCTTATTCCTC 58.428 50.000 16.21 0.00 0.00 3.71
2857 2889 0.675522 CACCCTAAACGCCCGATGTT 60.676 55.000 0.00 0.00 0.00 2.71
2859 2891 2.469516 GCACCCTAAACGCCCGATG 61.470 63.158 0.00 0.00 0.00 3.84
2881 2913 7.181125 ACCAGTTTCTCTTATGTCCAGTATCTT 59.819 37.037 0.00 0.00 0.00 2.40
2893 2925 6.681729 TTCCTGTACACCAGTTTCTCTTAT 57.318 37.500 0.00 0.00 39.74 1.73
2928 2960 9.146984 ACAATTTTCTGAGATTAACAATGCATG 57.853 29.630 0.00 0.00 0.00 4.06
2929 2961 9.362539 GACAATTTTCTGAGATTAACAATGCAT 57.637 29.630 0.00 0.00 0.00 3.96
2930 2962 7.538334 CGACAATTTTCTGAGATTAACAATGCA 59.462 33.333 0.00 0.00 0.00 3.96
2931 2963 7.461938 GCGACAATTTTCTGAGATTAACAATGC 60.462 37.037 0.00 0.00 0.00 3.56
2932 2964 7.538334 TGCGACAATTTTCTGAGATTAACAATG 59.462 33.333 0.00 0.00 0.00 2.82
2963 2995 9.308000 AGGAAATTTCATACCATAGTCAACAAA 57.692 29.630 19.49 0.00 0.00 2.83
2978 3010 3.198417 GCAACCCCATCAGGAAATTTCAT 59.802 43.478 19.49 10.18 38.24 2.57
3013 3045 3.545426 CGACCTCTTTCAACGTTTCCAAC 60.545 47.826 0.00 0.00 0.00 3.77
3019 3051 1.134610 ACACCGACCTCTTTCAACGTT 60.135 47.619 0.00 0.00 0.00 3.99
3044 3076 6.405286 CCTGACAGGAACTCTAATGACTGTAG 60.405 46.154 17.22 0.00 39.08 2.74
3058 3090 1.973812 GCCAAGGCCTGACAGGAAC 60.974 63.158 26.25 16.29 37.67 3.62
3108 3158 7.667043 TCAACTGTATCATTGGTGTAAGAAC 57.333 36.000 0.00 0.00 0.00 3.01
3113 3163 5.643348 CAGCTTCAACTGTATCATTGGTGTA 59.357 40.000 0.00 0.00 32.78 2.90
3164 3214 1.270907 CCTAGCTCACACAGGGAAGT 58.729 55.000 0.00 0.00 0.00 3.01
3242 3298 2.427453 CGAGGGTACTAAGCTCACACAT 59.573 50.000 0.00 0.00 0.00 3.21
3253 3309 3.083122 ACAAGCTTCTCGAGGGTACTA 57.917 47.619 13.56 0.00 0.00 1.82
3254 3310 1.926108 ACAAGCTTCTCGAGGGTACT 58.074 50.000 13.56 2.46 0.00 2.73
3255 3311 2.745515 AACAAGCTTCTCGAGGGTAC 57.254 50.000 13.56 0.00 0.00 3.34
3287 3346 1.195115 TTCGGAATCTGAGGGACCTG 58.805 55.000 0.00 0.00 0.00 4.00
3288 3347 1.952621 TTTCGGAATCTGAGGGACCT 58.047 50.000 0.00 0.00 0.00 3.85
3289 3348 2.565841 CATTTCGGAATCTGAGGGACC 58.434 52.381 0.00 0.00 0.00 4.46
3347 3406 3.077359 CCTGCTTAACTCCCTTCACTTG 58.923 50.000 0.00 0.00 0.00 3.16
3389 3448 2.254152 ATGTCCAGAGCAGGTAAGGA 57.746 50.000 0.00 0.00 0.00 3.36
3397 3456 0.615331 GGTCCAGAATGTCCAGAGCA 59.385 55.000 0.00 0.00 0.00 4.26
3398 3457 0.908198 AGGTCCAGAATGTCCAGAGC 59.092 55.000 0.00 0.00 31.99 4.09
3404 3463 0.895530 TCCGTCAGGTCCAGAATGTC 59.104 55.000 0.00 0.00 39.05 3.06
3405 3464 1.348064 TTCCGTCAGGTCCAGAATGT 58.652 50.000 0.00 0.00 39.05 2.71
3432 3491 6.017400 TGATTCTGAGCTTTTCATTTGACC 57.983 37.500 0.00 0.00 34.68 4.02
3461 3520 3.834231 CTCAAGGATTGGAACCCAACAAT 59.166 43.478 0.00 0.00 46.95 2.71
3463 3522 2.490718 CCTCAAGGATTGGAACCCAACA 60.491 50.000 0.00 0.00 46.95 3.33
3497 3556 2.065799 AGGGAAATCACCAGTTCCACT 58.934 47.619 3.81 0.00 46.88 4.00
3498 3557 2.162681 CAGGGAAATCACCAGTTCCAC 58.837 52.381 3.81 0.00 46.88 4.02
3505 3564 4.361783 TCAGATCTACAGGGAAATCACCA 58.638 43.478 0.00 0.00 0.00 4.17
3506 3565 5.163258 ACATCAGATCTACAGGGAAATCACC 60.163 44.000 0.00 0.00 0.00 4.02
3507 3566 5.923204 ACATCAGATCTACAGGGAAATCAC 58.077 41.667 0.00 0.00 0.00 3.06
3512 3571 4.517285 GCAAACATCAGATCTACAGGGAA 58.483 43.478 0.00 0.00 0.00 3.97
3513 3572 3.430790 CGCAAACATCAGATCTACAGGGA 60.431 47.826 0.00 0.00 0.00 4.20
3517 3576 2.279741 GCCGCAAACATCAGATCTACA 58.720 47.619 0.00 0.00 0.00 2.74
3563 3622 6.889722 ACTAGGAGCAAATAATTAAGCACCAA 59.110 34.615 19.00 2.39 39.72 3.67
3565 3624 6.944234 ACTAGGAGCAAATAATTAAGCACC 57.056 37.500 12.97 12.97 37.90 5.01
3602 3661 1.468914 GTTCTCGATTCCAAAGCCCAC 59.531 52.381 0.00 0.00 0.00 4.61
3630 3689 3.578282 TCTGCATTTGACAGTAGTGAGGA 59.422 43.478 4.09 0.00 36.50 3.71
3654 3713 1.295792 GCCATCTTCGTCGCCATTTA 58.704 50.000 0.00 0.00 0.00 1.40
3665 3727 3.057033 ACAGCTTCAACAATGCCATCTTC 60.057 43.478 0.00 0.00 0.00 2.87
3666 3728 2.895404 ACAGCTTCAACAATGCCATCTT 59.105 40.909 0.00 0.00 0.00 2.40
3667 3729 2.522185 ACAGCTTCAACAATGCCATCT 58.478 42.857 0.00 0.00 0.00 2.90
3692 3754 4.466898 TGCTCTCTCCATGGCAGA 57.533 55.556 6.96 9.89 0.00 4.26
3717 3779 0.546598 CCTAGGGTGGTTGGGATGTC 59.453 60.000 0.00 0.00 0.00 3.06
3736 3798 5.414144 AGCTTCAACTTCCTGAAAGAATAGC 59.586 40.000 0.00 0.00 38.44 2.97
3740 3802 8.103305 ACATATAGCTTCAACTTCCTGAAAGAA 58.897 33.333 0.00 0.00 38.44 2.52
3757 3819 6.726299 TGGGCAGACTAGAATAACATATAGCT 59.274 38.462 0.00 0.00 0.00 3.32
3758 3820 6.936279 TGGGCAGACTAGAATAACATATAGC 58.064 40.000 0.00 0.00 0.00 2.97
3759 3821 7.038659 GCTGGGCAGACTAGAATAACATATAG 58.961 42.308 0.00 0.00 0.00 1.31
3760 3822 6.726299 AGCTGGGCAGACTAGAATAACATATA 59.274 38.462 0.00 0.00 0.00 0.86
3761 3823 5.545723 AGCTGGGCAGACTAGAATAACATAT 59.454 40.000 0.00 0.00 0.00 1.78
3762 3824 4.901849 AGCTGGGCAGACTAGAATAACATA 59.098 41.667 0.00 0.00 0.00 2.29
3763 3825 3.713764 AGCTGGGCAGACTAGAATAACAT 59.286 43.478 0.00 0.00 0.00 2.71
3764 3826 3.107601 AGCTGGGCAGACTAGAATAACA 58.892 45.455 0.00 0.00 0.00 2.41
3765 3827 3.828875 AGCTGGGCAGACTAGAATAAC 57.171 47.619 0.00 0.00 0.00 1.89
3768 3830 2.573462 TCAAAGCTGGGCAGACTAGAAT 59.427 45.455 0.00 0.00 0.00 2.40
3769 3831 1.977854 TCAAAGCTGGGCAGACTAGAA 59.022 47.619 0.00 0.00 0.00 2.10
3773 3835 3.439857 TTAATCAAAGCTGGGCAGACT 57.560 42.857 0.00 0.00 0.00 3.24
3774 3836 3.255642 TGTTTAATCAAAGCTGGGCAGAC 59.744 43.478 0.00 0.00 0.00 3.51
3775 3837 3.495331 TGTTTAATCAAAGCTGGGCAGA 58.505 40.909 0.00 0.00 0.00 4.26
3776 3838 3.940209 TGTTTAATCAAAGCTGGGCAG 57.060 42.857 0.00 0.00 0.00 4.85
3778 3840 2.995939 GCTTGTTTAATCAAAGCTGGGC 59.004 45.455 9.04 1.77 0.00 5.36
3795 3857 1.237285 CGTTCCTGGTCCTTGGCTTG 61.237 60.000 0.00 0.00 0.00 4.01
3799 3861 2.351276 CCCGTTCCTGGTCCTTGG 59.649 66.667 0.00 0.00 0.00 3.61
3804 3866 2.222013 AACTCCCCCGTTCCTGGTC 61.222 63.158 0.00 0.00 0.00 4.02
3806 3868 2.351276 CAACTCCCCCGTTCCTGG 59.649 66.667 0.00 0.00 0.00 4.45
3816 3878 3.628646 ATGTCCAGCGGCAACTCCC 62.629 63.158 1.45 0.00 0.00 4.30
3817 3879 2.045926 ATGTCCAGCGGCAACTCC 60.046 61.111 1.45 0.00 0.00 3.85
3830 3892 6.423905 ACGCACCTGATACATATTTACATGTC 59.576 38.462 0.00 0.00 39.77 3.06
3831 3893 6.288294 ACGCACCTGATACATATTTACATGT 58.712 36.000 2.69 2.69 41.88 3.21
3832 3894 6.785488 ACGCACCTGATACATATTTACATG 57.215 37.500 0.00 0.00 0.00 3.21
3834 3896 9.797556 GATATACGCACCTGATACATATTTACA 57.202 33.333 0.00 0.00 0.00 2.41
3835 3897 9.797556 TGATATACGCACCTGATACATATTTAC 57.202 33.333 0.00 0.00 0.00 2.01
3836 3898 9.797556 GTGATATACGCACCTGATACATATTTA 57.202 33.333 0.00 0.00 0.00 1.40
3837 3899 8.703604 GTGATATACGCACCTGATACATATTT 57.296 34.615 0.00 0.00 0.00 1.40
3850 3912 1.195448 GCATGCTGGTGATATACGCAC 59.805 52.381 11.37 0.00 32.94 5.34
3851 3913 1.070601 AGCATGCTGGTGATATACGCA 59.929 47.619 21.98 0.00 34.83 5.24
3852 3914 1.800805 AGCATGCTGGTGATATACGC 58.199 50.000 21.98 0.00 0.00 4.42
3853 3915 4.306600 TGTTAGCATGCTGGTGATATACG 58.693 43.478 30.42 0.00 0.00 3.06
3854 3916 7.065085 CCTTATGTTAGCATGCTGGTGATATAC 59.935 40.741 30.42 13.84 36.58 1.47
3855 3917 7.105588 CCTTATGTTAGCATGCTGGTGATATA 58.894 38.462 30.42 16.26 36.58 0.86
3856 3918 5.942236 CCTTATGTTAGCATGCTGGTGATAT 59.058 40.000 30.42 17.15 36.58 1.63
3857 3919 5.308014 CCTTATGTTAGCATGCTGGTGATA 58.692 41.667 30.42 16.40 36.58 2.15
3858 3920 4.139786 CCTTATGTTAGCATGCTGGTGAT 58.860 43.478 30.42 17.35 36.58 3.06
3859 3921 3.544684 CCTTATGTTAGCATGCTGGTGA 58.455 45.455 30.42 7.20 36.58 4.02
3860 3922 2.033801 GCCTTATGTTAGCATGCTGGTG 59.966 50.000 30.42 12.06 36.58 4.17
3861 3923 2.301346 GCCTTATGTTAGCATGCTGGT 58.699 47.619 30.42 14.68 36.58 4.00
3862 3924 1.610522 GGCCTTATGTTAGCATGCTGG 59.389 52.381 30.42 20.61 36.58 4.85
3863 3925 2.292569 CAGGCCTTATGTTAGCATGCTG 59.707 50.000 30.42 11.66 36.58 4.41
3864 3926 2.579873 CAGGCCTTATGTTAGCATGCT 58.420 47.619 25.99 25.99 36.58 3.79
3865 3927 1.610522 CCAGGCCTTATGTTAGCATGC 59.389 52.381 10.51 10.51 37.00 4.06
3866 3928 2.936202 ACCAGGCCTTATGTTAGCATG 58.064 47.619 0.00 0.00 38.00 4.06
3867 3929 3.669939 AACCAGGCCTTATGTTAGCAT 57.330 42.857 0.00 0.00 39.03 3.79
3868 3930 3.449746 AAACCAGGCCTTATGTTAGCA 57.550 42.857 0.00 0.00 0.00 3.49
3869 3931 5.650703 TCTTAAAACCAGGCCTTATGTTAGC 59.349 40.000 0.00 0.00 0.00 3.09
3870 3932 6.884836 ACTCTTAAAACCAGGCCTTATGTTAG 59.115 38.462 0.00 3.82 0.00 2.34
3871 3933 6.786122 ACTCTTAAAACCAGGCCTTATGTTA 58.214 36.000 0.00 0.00 0.00 2.41
3872 3934 5.641155 ACTCTTAAAACCAGGCCTTATGTT 58.359 37.500 0.00 4.09 0.00 2.71
3873 3935 5.256806 ACTCTTAAAACCAGGCCTTATGT 57.743 39.130 0.00 0.00 0.00 2.29
3874 3936 6.590234 AAACTCTTAAAACCAGGCCTTATG 57.410 37.500 0.00 0.00 0.00 1.90
3875 3937 7.093902 GCTAAAACTCTTAAAACCAGGCCTTAT 60.094 37.037 0.00 0.00 0.00 1.73
3876 3938 6.208007 GCTAAAACTCTTAAAACCAGGCCTTA 59.792 38.462 0.00 0.00 0.00 2.69
3877 3939 5.010719 GCTAAAACTCTTAAAACCAGGCCTT 59.989 40.000 0.00 0.00 0.00 4.35
3878 3940 4.523173 GCTAAAACTCTTAAAACCAGGCCT 59.477 41.667 0.00 0.00 0.00 5.19
3879 3941 4.523173 AGCTAAAACTCTTAAAACCAGGCC 59.477 41.667 0.00 0.00 0.00 5.19
3880 3942 5.707242 AGCTAAAACTCTTAAAACCAGGC 57.293 39.130 0.00 0.00 0.00 4.85
3881 3943 8.794335 ATCTAGCTAAAACTCTTAAAACCAGG 57.206 34.615 0.00 0.00 0.00 4.45
3882 3944 8.884726 GGATCTAGCTAAAACTCTTAAAACCAG 58.115 37.037 0.00 0.00 0.00 4.00
3883 3945 8.603304 AGGATCTAGCTAAAACTCTTAAAACCA 58.397 33.333 0.00 0.00 0.00 3.67
3884 3946 9.451002 AAGGATCTAGCTAAAACTCTTAAAACC 57.549 33.333 0.00 0.00 0.00 3.27
3888 3950 8.697292 GGAGAAGGATCTAGCTAAAACTCTTAA 58.303 37.037 0.00 0.00 35.54 1.85
3889 3951 7.288158 GGGAGAAGGATCTAGCTAAAACTCTTA 59.712 40.741 0.00 0.00 35.54 2.10
3890 3952 6.099125 GGGAGAAGGATCTAGCTAAAACTCTT 59.901 42.308 0.00 0.00 35.54 2.85
3891 3953 5.600898 GGGAGAAGGATCTAGCTAAAACTCT 59.399 44.000 0.00 0.00 35.54 3.24
3892 3954 5.600898 AGGGAGAAGGATCTAGCTAAAACTC 59.399 44.000 0.00 0.00 35.54 3.01
3893 3955 5.534070 AGGGAGAAGGATCTAGCTAAAACT 58.466 41.667 0.00 0.00 35.54 2.66
3894 3956 5.880164 AGGGAGAAGGATCTAGCTAAAAC 57.120 43.478 0.00 0.00 35.54 2.43
3895 3957 6.893020 AAAGGGAGAAGGATCTAGCTAAAA 57.107 37.500 0.00 0.00 35.54 1.52
3896 3958 6.893020 AAAAGGGAGAAGGATCTAGCTAAA 57.107 37.500 0.00 0.00 35.54 1.85
3897 3959 7.789831 TCATAAAAGGGAGAAGGATCTAGCTAA 59.210 37.037 0.00 0.00 35.54 3.09
3898 3960 7.306013 TCATAAAAGGGAGAAGGATCTAGCTA 58.694 38.462 0.00 0.00 35.54 3.32
3899 3961 6.146760 TCATAAAAGGGAGAAGGATCTAGCT 58.853 40.000 0.00 0.00 35.54 3.32
3900 3962 6.426646 TCATAAAAGGGAGAAGGATCTAGC 57.573 41.667 0.00 0.00 35.54 3.42
3901 3963 6.878389 GCATCATAAAAGGGAGAAGGATCTAG 59.122 42.308 0.00 0.00 35.54 2.43
3902 3964 6.329986 TGCATCATAAAAGGGAGAAGGATCTA 59.670 38.462 0.00 0.00 35.54 1.98
3903 3965 5.133322 TGCATCATAAAAGGGAGAAGGATCT 59.867 40.000 0.00 0.00 39.10 2.75
3904 3966 5.380043 TGCATCATAAAAGGGAGAAGGATC 58.620 41.667 0.00 0.00 0.00 3.36
3905 3967 5.393068 TGCATCATAAAAGGGAGAAGGAT 57.607 39.130 0.00 0.00 0.00 3.24
3906 3968 4.860802 TGCATCATAAAAGGGAGAAGGA 57.139 40.909 0.00 0.00 0.00 3.36
3907 3969 4.891756 ACATGCATCATAAAAGGGAGAAGG 59.108 41.667 0.00 0.00 0.00 3.46
3908 3970 6.769822 AGTACATGCATCATAAAAGGGAGAAG 59.230 38.462 0.00 0.00 0.00 2.85
3909 3971 6.543465 CAGTACATGCATCATAAAAGGGAGAA 59.457 38.462 0.00 0.00 0.00 2.87
3910 3972 6.057533 CAGTACATGCATCATAAAAGGGAGA 58.942 40.000 0.00 0.00 0.00 3.71
3911 3973 6.057533 TCAGTACATGCATCATAAAAGGGAG 58.942 40.000 0.00 0.00 0.00 4.30
3912 3974 6.000246 TCAGTACATGCATCATAAAAGGGA 58.000 37.500 0.00 0.00 0.00 4.20
3913 3975 6.889301 ATCAGTACATGCATCATAAAAGGG 57.111 37.500 0.00 0.00 0.00 3.95
3914 3976 8.382030 TGTATCAGTACATGCATCATAAAAGG 57.618 34.615 0.00 0.00 35.94 3.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.