Multiple sequence alignment - TraesCS6B01G458500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G458500 chr6B 100.000 3290 0 0 2604 5893 713679491 713682780 0.000000e+00 6076.0
1 TraesCS6B01G458500 chr6B 100.000 2422 0 0 1 2422 713676888 713679309 0.000000e+00 4473.0
2 TraesCS6B01G458500 chr6B 92.135 2276 160 11 3410 5679 713358642 713360904 0.000000e+00 3193.0
3 TraesCS6B01G458500 chr6B 91.693 2215 156 21 2934 5130 713499012 713501216 0.000000e+00 3046.0
4 TraesCS6B01G458500 chr6B 93.065 1817 114 7 3310 5116 713825975 713827789 0.000000e+00 2647.0
5 TraesCS6B01G458500 chr6B 87.712 2238 225 27 2936 5134 713460927 713463153 0.000000e+00 2564.0
6 TraesCS6B01G458500 chr6B 87.534 2182 227 29 3021 5175 713908836 713910999 0.000000e+00 2481.0
7 TraesCS6B01G458500 chr6B 88.065 2103 203 27 3021 5093 713946213 713948297 0.000000e+00 2449.0
8 TraesCS6B01G458500 chr6B 85.878 2004 248 26 3063 5051 713771117 713773100 0.000000e+00 2100.0
9 TraesCS6B01G458500 chr6B 85.568 1947 246 20 3170 5106 713758416 713760337 0.000000e+00 2006.0
10 TraesCS6B01G458500 chr6B 86.534 1411 170 12 52 1459 713497583 713498976 0.000000e+00 1535.0
11 TraesCS6B01G458500 chr6B 83.061 980 136 13 487 1464 713824574 713825525 0.000000e+00 863.0
12 TraesCS6B01G458500 chr6B 92.079 505 35 2 5175 5679 713919802 713920301 0.000000e+00 706.0
13 TraesCS6B01G458500 chr6B 83.031 772 118 12 619 1386 713757333 713758095 0.000000e+00 688.0
14 TraesCS6B01G458500 chr6B 78.528 992 150 42 487 1458 713769983 713770931 1.410000e-165 593.0
15 TraesCS6B01G458500 chr6B 77.137 1041 171 41 442 1458 713907713 713908710 5.190000e-150 542.0
16 TraesCS6B01G458500 chr6B 77.371 928 159 22 550 1458 713460000 713460895 2.450000e-138 503.0
17 TraesCS6B01G458500 chr6B 76.940 928 162 23 550 1458 713945190 713946084 1.150000e-131 481.0
18 TraesCS6B01G458500 chr6B 92.059 340 25 2 2606 2944 68206943 68207281 1.490000e-130 477.0
19 TraesCS6B01G458500 chr6B 89.329 328 35 0 2606 2933 78183634 78183961 4.250000e-111 412.0
20 TraesCS6B01G458500 chr6B 96.789 218 7 0 5676 5893 713695356 713695573 1.210000e-96 364.0
21 TraesCS6B01G458500 chr6B 85.465 344 46 4 2606 2947 161786063 161785722 7.260000e-94 355.0
22 TraesCS6B01G458500 chr6B 83.285 347 52 6 2611 2953 213846596 213846940 1.230000e-81 315.0
23 TraesCS6B01G458500 chr6D 94.480 2210 106 8 2934 5130 467858930 467861136 0.000000e+00 3391.0
24 TraesCS6B01G458500 chr6D 92.393 1354 96 5 128 1478 467857583 467858932 0.000000e+00 1923.0
25 TraesCS6B01G458500 chr6D 87.920 1399 161 7 3403 4797 263266709 263265315 0.000000e+00 1640.0
26 TraesCS6B01G458500 chr6D 87.222 180 19 3 1513 1690 423147039 423146862 1.000000e-47 202.0
27 TraesCS6B01G458500 chr6D 100.000 51 0 0 1 51 86593707 86593657 1.750000e-15 95.3
28 TraesCS6B01G458500 chr6D 98.039 51 1 0 1 51 239779030 239779080 8.130000e-14 89.8
29 TraesCS6B01G458500 chr6D 98.039 51 1 0 1 51 417630365 417630315 8.130000e-14 89.8
30 TraesCS6B01G458500 chr6D 94.545 55 2 1 1 54 159484291 159484345 3.780000e-12 84.2
31 TraesCS6B01G458500 chr6D 96.078 51 2 0 1 51 239679979 239680029 3.780000e-12 84.2
32 TraesCS6B01G458500 chr6A 90.836 1735 154 5 3399 5130 613974767 613976499 0.000000e+00 2318.0
33 TraesCS6B01G458500 chr6A 77.233 918 154 30 557 1455 613973140 613974021 2.470000e-133 486.0
34 TraesCS6B01G458500 chr6A 100.000 52 0 0 1 52 16953457 16953406 4.860000e-16 97.1
35 TraesCS6B01G458500 chr6A 100.000 52 0 0 1 52 53396298 53396349 4.860000e-16 97.1
36 TraesCS6B01G458500 chr5B 87.460 949 88 15 1479 2412 131019993 131019061 0.000000e+00 1064.0
37 TraesCS6B01G458500 chr5B 86.325 936 105 16 1479 2398 409443445 409444373 0.000000e+00 998.0
38 TraesCS6B01G458500 chr5B 89.337 769 58 14 1472 2220 394739092 394738328 0.000000e+00 944.0
39 TraesCS6B01G458500 chr5B 84.916 895 108 20 1479 2364 670861507 670862383 0.000000e+00 880.0
40 TraesCS6B01G458500 chr5B 91.768 328 27 0 2606 2933 131018915 131018588 1.940000e-124 457.0
41 TraesCS6B01G458500 chr5B 90.244 328 32 0 2606 2933 394737906 394737579 4.220000e-116 429.0
42 TraesCS6B01G458500 chr5B 89.970 329 33 0 2605 2933 7205306 7205634 5.460000e-115 425.0
43 TraesCS6B01G458500 chr5B 97.706 218 5 0 5676 5893 422164276 422164059 5.580000e-100 375.0
44 TraesCS6B01G458500 chr5B 97.706 218 4 1 5676 5893 422184785 422184569 2.010000e-99 374.0
45 TraesCS6B01G458500 chr5B 97.209 215 6 0 5679 5893 146233002 146232788 1.210000e-96 364.0
46 TraesCS6B01G458500 chr5B 96.296 216 8 0 5678 5893 146226080 146225865 7.260000e-94 355.0
47 TraesCS6B01G458500 chr5B 97.087 206 6 0 5685 5890 551357487 551357692 1.220000e-91 348.0
48 TraesCS6B01G458500 chr5B 95.814 215 9 0 5676 5890 551379902 551380116 1.220000e-91 348.0
49 TraesCS6B01G458500 chr5B 100.000 54 0 0 1 54 493771435 493771488 3.760000e-17 100.0
50 TraesCS6B01G458500 chr5B 82.716 81 11 3 187 265 235523174 235523253 1.060000e-07 69.4
51 TraesCS6B01G458500 chr5B 94.737 38 1 1 229 265 142775058 142775021 2.290000e-04 58.4
52 TraesCS6B01G458500 chr4A 86.723 949 71 27 1479 2412 660652151 660651243 0.000000e+00 1003.0
53 TraesCS6B01G458500 chr4A 83.718 823 93 26 1479 2272 718532967 718533777 0.000000e+00 739.0
54 TraesCS6B01G458500 chr4A 86.167 694 78 12 1580 2267 647106379 647105698 0.000000e+00 734.0
55 TraesCS6B01G458500 chr4A 81.306 337 61 2 2610 2946 407530622 407530956 7.530000e-69 272.0
56 TraesCS6B01G458500 chr4A 85.909 220 24 4 1479 1693 702042688 702042471 1.650000e-55 228.0
57 TraesCS6B01G458500 chr4A 94.828 58 3 0 1 58 175107198 175107141 2.260000e-14 91.6
58 TraesCS6B01G458500 chr7D 86.703 910 75 19 1479 2383 19868758 19869626 0.000000e+00 968.0
59 TraesCS6B01G458500 chr7D 81.934 786 93 17 1469 2220 627753118 627753888 2.330000e-173 619.0
60 TraesCS6B01G458500 chr2B 85.145 929 97 21 1500 2412 28466878 28467781 0.000000e+00 913.0
61 TraesCS6B01G458500 chr2B 98.214 56 0 1 1 56 386621784 386621730 4.860000e-16 97.1
62 TraesCS6B01G458500 chr7B 90.057 704 61 8 1712 2411 660355423 660354725 0.000000e+00 904.0
63 TraesCS6B01G458500 chr7B 89.602 327 34 0 2606 2932 14690825 14690499 3.290000e-112 416.0
64 TraesCS6B01G458500 chr7B 98.165 218 4 0 5676 5893 608992541 608992758 1.200000e-101 381.0
65 TraesCS6B01G458500 chr7B 97.706 218 5 0 5676 5893 649499128 649498911 5.580000e-100 375.0
66 TraesCS6B01G458500 chr7B 98.565 209 3 0 5685 5893 649511114 649510906 2.590000e-98 370.0
67 TraesCS6B01G458500 chr7B 100.000 52 0 0 1 52 203345079 203345130 4.860000e-16 97.1
68 TraesCS6B01G458500 chr7B 100.000 52 0 0 1 52 726489401 726489452 4.860000e-16 97.1
69 TraesCS6B01G458500 chr1B 89.773 704 63 7 1712 2412 489906659 489905962 0.000000e+00 893.0
70 TraesCS6B01G458500 chr1B 98.624 218 3 0 5676 5893 588549735 588549518 2.580000e-103 387.0
71 TraesCS6B01G458500 chr1B 99.522 209 1 0 5685 5893 588562419 588562211 1.200000e-101 381.0
72 TraesCS6B01G458500 chr1B 96.313 217 8 0 5677 5893 637572977 637573193 2.020000e-94 357.0
73 TraesCS6B01G458500 chr1B 95.694 209 9 0 5685 5893 324959712 324959504 2.630000e-88 337.0
74 TraesCS6B01G458500 chr1B 94.495 218 12 0 5676 5893 637583659 637583876 2.630000e-88 337.0
75 TraesCS6B01G458500 chr1B 93.578 218 14 0 5676 5893 324947144 324946927 5.700000e-85 326.0
76 TraesCS6B01G458500 chr1B 100.000 51 0 0 1 51 105237723 105237773 1.750000e-15 95.3
77 TraesCS6B01G458500 chr3B 88.669 706 70 9 1712 2412 592955661 592954961 0.000000e+00 852.0
78 TraesCS6B01G458500 chr3B 90.549 328 31 0 2606 2933 800116471 800116798 9.070000e-118 435.0
79 TraesCS6B01G458500 chr3B 89.329 328 35 0 2606 2933 820280885 820280558 4.250000e-111 412.0
80 TraesCS6B01G458500 chr3B 99.517 207 1 0 5687 5893 818179821 818179615 1.550000e-100 377.0
81 TraesCS6B01G458500 chr3B 100.000 54 0 0 1 54 563193022 563193075 3.760000e-17 100.0
82 TraesCS6B01G458500 chr3B 91.071 56 5 0 371 426 70729294 70729349 6.330000e-10 76.8
83 TraesCS6B01G458500 chrUn 89.634 328 34 0 2606 2933 41985288 41985615 9.130000e-113 418.0
84 TraesCS6B01G458500 chrUn 93.488 215 14 0 5676 5890 346915124 346915338 2.650000e-83 320.0
85 TraesCS6B01G458500 chrUn 93.488 215 14 0 5676 5890 352371679 352371465 2.650000e-83 320.0
86 TraesCS6B01G458500 chrUn 93.488 215 14 0 5676 5890 460920228 460920442 2.650000e-83 320.0
87 TraesCS6B01G458500 chrUn 94.118 204 12 0 5685 5888 251678329 251678532 1.590000e-80 311.0
88 TraesCS6B01G458500 chrUn 91.866 209 17 0 5682 5890 5051793 5052001 5.780000e-75 292.0
89 TraesCS6B01G458500 chrUn 91.163 215 19 0 5676 5890 5064200 5064414 5.780000e-75 292.0
90 TraesCS6B01G458500 chrUn 91.163 215 18 1 5676 5890 79610430 79610217 2.080000e-74 291.0
91 TraesCS6B01G458500 chrUn 91.163 215 18 1 5676 5890 256920190 256920403 2.080000e-74 291.0
92 TraesCS6B01G458500 chrUn 90.698 215 19 1 5676 5890 79598357 79598570 9.670000e-73 285.0
93 TraesCS6B01G458500 chrUn 98.077 52 1 0 1 52 41504990 41505041 2.260000e-14 91.6
94 TraesCS6B01G458500 chrUn 98.039 51 1 0 1 51 73144602 73144552 8.130000e-14 89.8
95 TraesCS6B01G458500 chrUn 96.154 52 2 0 1 52 108884889 108884838 1.050000e-12 86.1
96 TraesCS6B01G458500 chrUn 96.078 51 2 0 1 51 63723876 63723926 3.780000e-12 84.2
97 TraesCS6B01G458500 chrUn 87.879 66 8 0 371 436 28349406 28349341 1.760000e-10 78.7
98 TraesCS6B01G458500 chr7A 82.808 349 57 3 2606 2952 71843960 71843613 5.740000e-80 309.0
99 TraesCS6B01G458500 chr7A 82.521 349 58 3 2606 2952 71817023 71816676 2.670000e-78 303.0
100 TraesCS6B01G458500 chr7A 82.196 337 57 3 2618 2952 71823765 71823430 2.690000e-73 287.0
101 TraesCS6B01G458500 chr7A 81.662 349 61 3 2606 2952 71857540 71857193 2.690000e-73 287.0
102 TraesCS6B01G458500 chr7A 81.089 349 63 3 2606 2952 71810277 71809930 5.820000e-70 276.0
103 TraesCS6B01G458500 chr4B 92.558 215 16 0 5676 5890 517293113 517292899 5.740000e-80 309.0
104 TraesCS6B01G458500 chr4B 92.093 215 17 0 5676 5890 394991669 394991883 2.670000e-78 303.0
105 TraesCS6B01G458500 chr4B 93.204 206 14 0 5685 5890 398738344 398738139 2.670000e-78 303.0
106 TraesCS6B01G458500 chr4B 92.093 215 17 0 5676 5890 448320770 448320984 2.670000e-78 303.0
107 TraesCS6B01G458500 chr4B 93.204 206 14 0 5685 5890 517313628 517313423 2.670000e-78 303.0
108 TraesCS6B01G458500 chr4B 91.628 215 18 0 5676 5890 447733207 447733421 1.240000e-76 298.0
109 TraesCS6B01G458500 chr4B 91.628 215 18 0 5676 5890 447759859 447760073 1.240000e-76 298.0
110 TraesCS6B01G458500 chr4B 100.000 52 0 0 1 52 38032290 38032239 4.860000e-16 97.1
111 TraesCS6B01G458500 chr4B 100.000 51 0 0 1 51 38038018 38037968 1.750000e-15 95.3
112 TraesCS6B01G458500 chr4B 100.000 51 0 0 1 51 172757041 172757091 1.750000e-15 95.3
113 TraesCS6B01G458500 chr5A 81.739 345 59 3 2606 2948 572222179 572221837 9.670000e-73 285.0
114 TraesCS6B01G458500 chr5A 100.000 52 0 0 1 52 565576787 565576736 4.860000e-16 97.1
115 TraesCS6B01G458500 chr5A 100.000 52 0 0 1 52 600302790 600302739 4.860000e-16 97.1
116 TraesCS6B01G458500 chr5A 96.491 57 2 0 1 57 157875368 157875312 1.750000e-15 95.3
117 TraesCS6B01G458500 chr3D 79.149 470 54 15 1465 1907 581026376 581025924 9.670000e-73 285.0
118 TraesCS6B01G458500 chr3D 80.258 233 36 9 1464 1693 496371832 496372057 3.650000e-37 167.0
119 TraesCS6B01G458500 chr2D 85.455 220 27 5 1474 1690 180468332 180468115 2.140000e-54 224.0
120 TraesCS6B01G458500 chr4D 85.185 216 25 5 1474 1686 110271650 110271861 1.290000e-51 215.0
121 TraesCS6B01G458500 chr4D 100.000 51 0 0 1 51 94318342 94318392 1.750000e-15 95.3
122 TraesCS6B01G458500 chr4D 100.000 51 0 0 1 51 94325545 94325595 1.750000e-15 95.3
123 TraesCS6B01G458500 chr4D 100.000 51 0 0 1 51 219426498 219426448 1.750000e-15 95.3
124 TraesCS6B01G458500 chr4D 87.692 65 8 0 371 435 287364634 287364698 6.330000e-10 76.8
125 TraesCS6B01G458500 chr1A 89.172 157 12 3 1475 1629 593634672 593634519 2.170000e-44 191.0
126 TraesCS6B01G458500 chr2A 79.470 151 29 1 115 265 530901144 530900996 8.080000e-19 106.0
127 TraesCS6B01G458500 chr1D 100.000 52 0 0 1 52 272501872 272501923 4.860000e-16 97.1
128 TraesCS6B01G458500 chr1D 100.000 51 0 0 1 51 41245487 41245537 1.750000e-15 95.3
129 TraesCS6B01G458500 chr3A 86.885 61 8 0 377 437 520424980 520424920 1.060000e-07 69.4
130 TraesCS6B01G458500 chr5D 91.304 46 4 0 319 364 391806041 391806086 4.930000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G458500 chr6B 713676888 713682780 5892 False 5274.5 6076 100.0000 1 5893 2 chr6B.!!$F9 5892
1 TraesCS6B01G458500 chr6B 713358642 713360904 2262 False 3193.0 3193 92.1350 3410 5679 1 chr6B.!!$F4 2269
2 TraesCS6B01G458500 chr6B 713497583 713501216 3633 False 2290.5 3046 89.1135 52 5130 2 chr6B.!!$F8 5078
3 TraesCS6B01G458500 chr6B 713824574 713827789 3215 False 1755.0 2647 88.0630 487 5116 2 chr6B.!!$F12 4629
4 TraesCS6B01G458500 chr6B 713460000 713463153 3153 False 1533.5 2564 82.5415 550 5134 2 chr6B.!!$F7 4584
5 TraesCS6B01G458500 chr6B 713907713 713910999 3286 False 1511.5 2481 82.3355 442 5175 2 chr6B.!!$F13 4733
6 TraesCS6B01G458500 chr6B 713945190 713948297 3107 False 1465.0 2449 82.5025 550 5093 2 chr6B.!!$F14 4543
7 TraesCS6B01G458500 chr6B 713757333 713760337 3004 False 1347.0 2006 84.2995 619 5106 2 chr6B.!!$F10 4487
8 TraesCS6B01G458500 chr6B 713769983 713773100 3117 False 1346.5 2100 82.2030 487 5051 2 chr6B.!!$F11 4564
9 TraesCS6B01G458500 chr6D 467857583 467861136 3553 False 2657.0 3391 93.4365 128 5130 2 chr6D.!!$F4 5002
10 TraesCS6B01G458500 chr6D 263265315 263266709 1394 True 1640.0 1640 87.9200 3403 4797 1 chr6D.!!$R2 1394
11 TraesCS6B01G458500 chr6A 613973140 613976499 3359 False 1402.0 2318 84.0345 557 5130 2 chr6A.!!$F2 4573
12 TraesCS6B01G458500 chr5B 409443445 409444373 928 False 998.0 998 86.3250 1479 2398 1 chr5B.!!$F3 919
13 TraesCS6B01G458500 chr5B 670861507 670862383 876 False 880.0 880 84.9160 1479 2364 1 chr5B.!!$F7 885
14 TraesCS6B01G458500 chr5B 131018588 131019993 1405 True 760.5 1064 89.6140 1479 2933 2 chr5B.!!$R6 1454
15 TraesCS6B01G458500 chr5B 394737579 394739092 1513 True 686.5 944 89.7905 1472 2933 2 chr5B.!!$R7 1461
16 TraesCS6B01G458500 chr4A 660651243 660652151 908 True 1003.0 1003 86.7230 1479 2412 1 chr4A.!!$R3 933
17 TraesCS6B01G458500 chr4A 718532967 718533777 810 False 739.0 739 83.7180 1479 2272 1 chr4A.!!$F2 793
18 TraesCS6B01G458500 chr4A 647105698 647106379 681 True 734.0 734 86.1670 1580 2267 1 chr4A.!!$R2 687
19 TraesCS6B01G458500 chr7D 19868758 19869626 868 False 968.0 968 86.7030 1479 2383 1 chr7D.!!$F1 904
20 TraesCS6B01G458500 chr7D 627753118 627753888 770 False 619.0 619 81.9340 1469 2220 1 chr7D.!!$F2 751
21 TraesCS6B01G458500 chr2B 28466878 28467781 903 False 913.0 913 85.1450 1500 2412 1 chr2B.!!$F1 912
22 TraesCS6B01G458500 chr7B 660354725 660355423 698 True 904.0 904 90.0570 1712 2411 1 chr7B.!!$R4 699
23 TraesCS6B01G458500 chr1B 489905962 489906659 697 True 893.0 893 89.7730 1712 2412 1 chr1B.!!$R3 700
24 TraesCS6B01G458500 chr3B 592954961 592955661 700 True 852.0 852 88.6690 1712 2412 1 chr3B.!!$R1 700

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
757 764 2.357637 TGCTACGCTGCTGAAAAGTTTT 59.642 40.909 0.00 0.00 0.00 2.43 F
1174 1205 1.683385 GCCAGTGCTCTCAAGGTTTTT 59.317 47.619 0.00 0.00 33.53 1.94 F
1967 2194 0.903236 ACCCTCGGGAGTTTAGCTTC 59.097 55.000 9.43 0.00 38.96 3.86 F
2797 3334 0.757512 TAGTACCGGTTTGTGGCACA 59.242 50.000 17.96 17.96 0.00 4.57 F
3256 3858 1.066908 ACAAACATGTGCCTGGAAACG 59.933 47.619 0.00 0.00 0.00 3.60 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1812 2036 0.388907 CGGCCGGAAAGTTAGACGAA 60.389 55.000 20.10 0.00 0.00 3.85 R
2710 3247 1.121378 TAGTCCCGGTTTGTGACACA 58.879 50.000 3.56 3.56 0.00 3.72 R
2808 3345 1.226030 CCGGTCCGTGTTGAACCTTC 61.226 60.000 11.06 0.00 0.00 3.46 R
4217 5099 1.520120 TATCGCAGCAGCTGAGTGC 60.520 57.895 27.39 24.47 44.35 4.40 R
4929 5814 0.250901 ACTGACATGCACCTGGGAAC 60.251 55.000 0.00 0.00 0.00 3.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.895404 TCATGCTCCGTTACCCTATACC 59.105 50.000 0.00 0.00 0.00 2.73
22 23 2.761786 TGCTCCGTTACCCTATACCT 57.238 50.000 0.00 0.00 0.00 3.08
23 24 3.036452 TGCTCCGTTACCCTATACCTT 57.964 47.619 0.00 0.00 0.00 3.50
24 25 4.183223 TGCTCCGTTACCCTATACCTTA 57.817 45.455 0.00 0.00 0.00 2.69
25 26 4.744237 TGCTCCGTTACCCTATACCTTAT 58.256 43.478 0.00 0.00 0.00 1.73
26 27 5.149976 TGCTCCGTTACCCTATACCTTATT 58.850 41.667 0.00 0.00 0.00 1.40
27 28 6.314120 TGCTCCGTTACCCTATACCTTATTA 58.686 40.000 0.00 0.00 0.00 0.98
28 29 6.955851 TGCTCCGTTACCCTATACCTTATTAT 59.044 38.462 0.00 0.00 0.00 1.28
29 30 7.455638 TGCTCCGTTACCCTATACCTTATTATT 59.544 37.037 0.00 0.00 0.00 1.40
30 31 7.763071 GCTCCGTTACCCTATACCTTATTATTG 59.237 40.741 0.00 0.00 0.00 1.90
31 32 8.725606 TCCGTTACCCTATACCTTATTATTGT 57.274 34.615 0.00 0.00 0.00 2.71
32 33 8.806146 TCCGTTACCCTATACCTTATTATTGTC 58.194 37.037 0.00 0.00 0.00 3.18
33 34 7.756722 CCGTTACCCTATACCTTATTATTGTCG 59.243 40.741 0.00 0.00 0.00 4.35
34 35 7.756722 CGTTACCCTATACCTTATTATTGTCGG 59.243 40.741 0.00 0.00 0.00 4.79
35 36 8.806146 GTTACCCTATACCTTATTATTGTCGGA 58.194 37.037 0.00 0.00 0.00 4.55
36 37 7.860649 ACCCTATACCTTATTATTGTCGGAA 57.139 36.000 0.00 0.00 0.00 4.30
37 38 8.445361 ACCCTATACCTTATTATTGTCGGAAT 57.555 34.615 0.00 0.00 0.00 3.01
38 39 8.537858 ACCCTATACCTTATTATTGTCGGAATC 58.462 37.037 0.00 0.00 0.00 2.52
39 40 7.705325 CCCTATACCTTATTATTGTCGGAATCG 59.295 40.741 0.00 0.00 37.82 3.34
40 41 8.248945 CCTATACCTTATTATTGTCGGAATCGT 58.751 37.037 0.00 0.00 37.69 3.73
41 42 9.635520 CTATACCTTATTATTGTCGGAATCGTT 57.364 33.333 0.00 0.00 37.69 3.85
42 43 6.839820 ACCTTATTATTGTCGGAATCGTTC 57.160 37.500 0.00 0.00 37.69 3.95
43 44 5.756833 ACCTTATTATTGTCGGAATCGTTCC 59.243 40.000 6.68 6.68 46.62 3.62
79 80 7.406031 TTGTCTCTAATAGTGGAGAATTCGT 57.594 36.000 7.88 0.00 42.43 3.85
80 81 6.796426 TGTCTCTAATAGTGGAGAATTCGTG 58.204 40.000 7.88 0.00 42.43 4.35
92 93 4.389077 GGAGAATTCGTGACAAGGTGTTAG 59.611 45.833 0.00 0.00 0.00 2.34
104 105 8.086522 GTGACAAGGTGTTAGTAAGACTTATGA 58.913 37.037 9.78 0.00 0.00 2.15
107 108 8.594550 ACAAGGTGTTAGTAAGACTTATGATGT 58.405 33.333 9.78 1.75 0.00 3.06
124 125 5.055265 TGATGTTTTTGTTACTCCCTCCA 57.945 39.130 0.00 0.00 0.00 3.86
166 167 6.356757 ACTCGTAGTTCTAGGTCGTAAATC 57.643 41.667 0.00 0.00 0.00 2.17
283 284 7.283625 TGTAACATTGTTTTAGGTTGATGCT 57.716 32.000 7.45 0.00 0.00 3.79
288 289 5.627499 TTGTTTTAGGTTGATGCTGCTAG 57.373 39.130 0.00 0.00 0.00 3.42
297 298 4.271291 GGTTGATGCTGCTAGCTACTTTAC 59.729 45.833 17.23 6.10 42.97 2.01
306 307 6.761714 GCTGCTAGCTACTTTACTAAAATGGA 59.238 38.462 17.23 0.00 38.45 3.41
311 312 7.865706 AGCTACTTTACTAAAATGGATGTGG 57.134 36.000 0.00 0.00 0.00 4.17
356 357 4.324022 GGGGGTAATCCTCTTTTTCGAAGA 60.324 45.833 0.00 0.00 33.94 2.87
403 404 6.812160 GTCAAATCAATGACCTAGAACTACGT 59.188 38.462 0.00 0.00 43.11 3.57
439 440 2.903798 CGAGACGGAGGTAGTAGTCTT 58.096 52.381 0.00 0.00 43.17 3.01
440 441 3.269178 CGAGACGGAGGTAGTAGTCTTT 58.731 50.000 0.00 0.00 43.17 2.52
446 447 3.631227 CGGAGGTAGTAGTCTTTACCCAG 59.369 52.174 8.78 0.55 40.16 4.45
475 476 6.366340 TGGGATTTGTTTTCCACAAGTAGTA 58.634 36.000 0.00 0.00 46.37 1.82
476 477 6.488683 TGGGATTTGTTTTCCACAAGTAGTAG 59.511 38.462 0.00 0.00 46.37 2.57
477 478 6.379386 GGATTTGTTTTCCACAAGTAGTAGC 58.621 40.000 0.00 0.00 46.37 3.58
478 479 6.206829 GGATTTGTTTTCCACAAGTAGTAGCT 59.793 38.462 0.00 0.00 46.37 3.32
479 480 6.371809 TTTGTTTTCCACAAGTAGTAGCTG 57.628 37.500 0.00 0.00 46.37 4.24
480 481 4.385825 TGTTTTCCACAAGTAGTAGCTGG 58.614 43.478 0.00 0.00 29.87 4.85
579 583 9.490379 GTCTAAATAGGATGACCATTAATTCGT 57.510 33.333 0.00 0.00 38.94 3.85
650 654 8.250143 TCTTCCTATGTCAATATACTTGCAGA 57.750 34.615 0.00 0.00 0.00 4.26
671 678 6.349115 GCAGAGCAATACAATCCCAATCATAG 60.349 42.308 0.00 0.00 0.00 2.23
757 764 2.357637 TGCTACGCTGCTGAAAAGTTTT 59.642 40.909 0.00 0.00 0.00 2.43
777 784 8.594881 AGTTTTGACTTAACTGTACATCAGAG 57.405 34.615 0.00 0.00 46.27 3.35
814 842 6.555738 TCTTGATCGAGGGGGTAACAATATTA 59.444 38.462 10.19 0.00 39.74 0.98
947 975 5.224441 AGGTTATAGAAGCAATGGGGACTA 58.776 41.667 1.71 0.00 35.41 2.59
1058 1089 2.357009 CGAAGGCTATGAGCAAGCAAAT 59.643 45.455 0.21 0.00 44.75 2.32
1174 1205 1.683385 GCCAGTGCTCTCAAGGTTTTT 59.317 47.619 0.00 0.00 33.53 1.94
1215 1246 4.196193 TGAACGGATGCCAAGGTAAATAG 58.804 43.478 0.00 0.00 0.00 1.73
1216 1247 3.926058 ACGGATGCCAAGGTAAATAGT 57.074 42.857 0.00 0.00 0.00 2.12
1217 1248 5.104859 TGAACGGATGCCAAGGTAAATAGTA 60.105 40.000 0.00 0.00 0.00 1.82
1220 1251 5.163237 ACGGATGCCAAGGTAAATAGTACAT 60.163 40.000 0.00 0.00 0.00 2.29
1221 1252 5.763204 CGGATGCCAAGGTAAATAGTACATT 59.237 40.000 0.00 0.00 0.00 2.71
1224 1255 7.717875 GGATGCCAAGGTAAATAGTACATTACA 59.282 37.037 14.32 0.00 34.44 2.41
1225 1256 9.116067 GATGCCAAGGTAAATAGTACATTACAA 57.884 33.333 14.32 0.00 34.44 2.41
1226 1257 8.271312 TGCCAAGGTAAATAGTACATTACAAC 57.729 34.615 14.32 3.23 34.44 3.32
1228 1259 8.395633 GCCAAGGTAAATAGTACATTACAACTG 58.604 37.037 14.32 9.48 34.44 3.16
1468 1585 8.613482 CACACGATGTAGAGACTAGAAGAATTA 58.387 37.037 0.00 0.00 0.00 1.40
1510 1627 6.040054 AGCAAAACGACCTTTAATACTGGTTT 59.960 34.615 0.00 0.00 33.74 3.27
1568 1685 1.962558 AGGGTGGGGACTAAAGGTAC 58.037 55.000 0.00 0.00 0.00 3.34
1693 1839 7.813645 ACATCAATCGGTACTAAAGGTTTTTC 58.186 34.615 0.00 0.00 0.00 2.29
1695 1841 9.158233 CATCAATCGGTACTAAAGGTTTTTCTA 57.842 33.333 0.00 0.00 0.00 2.10
1696 1842 9.729281 ATCAATCGGTACTAAAGGTTTTTCTAA 57.271 29.630 0.00 0.00 0.00 2.10
1812 2036 4.547886 AATCACCCCTCATCATTCCAAT 57.452 40.909 0.00 0.00 0.00 3.16
1967 2194 0.903236 ACCCTCGGGAGTTTAGCTTC 59.097 55.000 9.43 0.00 38.96 3.86
2011 2238 7.632721 TCACCGTTTGAGTTTGAAACTATTAC 58.367 34.615 11.01 7.97 43.03 1.89
2079 2306 4.839121 AGTAGTTTGACCACAGTTTGACA 58.161 39.130 0.00 0.00 0.00 3.58
2088 2424 4.932146 ACCACAGTTTGACAATAGTTTGC 58.068 39.130 0.00 0.00 36.22 3.68
2157 2562 9.924650 AGTAACACTAATATTTCTTGAACGAGT 57.075 29.630 0.00 0.00 0.00 4.18
2160 2565 9.924650 AACACTAATATTTCTTGAACGAGTAGT 57.075 29.630 0.00 0.00 0.00 2.73
2166 2571 8.827177 ATATTTCTTGAACGAGTAGTTTGACA 57.173 30.769 0.00 0.00 44.35 3.58
2167 2572 6.971527 TTTCTTGAACGAGTAGTTTGACAA 57.028 33.333 0.00 0.00 44.35 3.18
2392 2821 7.641411 GGTCGTTTTACTTTTTCCTAACACTTC 59.359 37.037 0.00 0.00 0.00 3.01
2399 2831 6.564328 ACTTTTTCCTAACACTTCTTTGCAG 58.436 36.000 0.00 0.00 0.00 4.41
2685 3222 3.894782 TTGTGACACAAACCGATGATG 57.105 42.857 18.56 0.00 34.76 3.07
2732 3269 3.143728 GTGTCACAAACCGGGACTAAAT 58.856 45.455 6.32 0.00 32.84 1.40
2734 3271 3.143728 GTCACAAACCGGGACTAAATGT 58.856 45.455 6.32 0.00 0.00 2.71
2789 3326 1.352017 CCACCCCTTTAGTACCGGTTT 59.648 52.381 15.04 4.12 0.00 3.27
2797 3334 0.757512 TAGTACCGGTTTGTGGCACA 59.242 50.000 17.96 17.96 0.00 4.57
2808 3345 3.724508 TTGTGGCACAAACCTGTATTG 57.275 42.857 29.45 0.00 44.16 1.90
2822 3359 5.279758 ACCTGTATTGAAGGTTCAACACGG 61.280 45.833 13.53 13.53 46.14 4.94
2915 3452 4.572795 GGGACTAAAGAGCTGAACATTAGC 59.427 45.833 0.00 0.00 41.43 3.09
3040 3594 4.816385 TCCTTGTTTGAGCTAACACTGAAG 59.184 41.667 1.45 0.00 37.72 3.02
3046 3604 4.193826 TGAGCTAACACTGAAGATCACC 57.806 45.455 0.00 0.00 33.47 4.02
3049 3607 4.764172 AGCTAACACTGAAGATCACCATC 58.236 43.478 0.00 0.00 0.00 3.51
3109 3701 6.714492 TCTATAATGTGCGCATACAAACTTG 58.286 36.000 15.91 0.00 34.39 3.16
3154 3747 9.619316 GCATACACATAAACAAGTAAATTCACA 57.381 29.630 0.00 0.00 0.00 3.58
3256 3858 1.066908 ACAAACATGTGCCTGGAAACG 59.933 47.619 0.00 0.00 0.00 3.60
3323 3965 4.669206 AATGTCTCTAGGATGAGTGCTG 57.331 45.455 0.00 0.00 35.68 4.41
3332 3975 3.292481 ATGAGTGCTGGGCCAAGGG 62.292 63.158 9.87 0.00 0.00 3.95
3335 3978 2.044946 GTGCTGGGCCAAGGGTAG 60.045 66.667 9.87 0.00 0.00 3.18
3341 3984 2.062177 GGGCCAAGGGTAGCGTAGA 61.062 63.158 4.39 0.00 0.00 2.59
3345 3988 2.302157 GGCCAAGGGTAGCGTAGATATT 59.698 50.000 0.00 0.00 0.00 1.28
3353 3996 6.305411 AGGGTAGCGTAGATATTGTTCTACT 58.695 40.000 9.28 0.00 43.87 2.57
3539 4401 6.698008 AGAACTCAAATGTGTCATGTCAAA 57.302 33.333 0.00 0.00 0.00 2.69
3704 4586 3.066760 GTGCCATAATTCTTGTGGTAGGC 59.933 47.826 4.83 0.00 43.18 3.93
3772 4654 7.038659 AGAATTCGAAGGACATACTTCAAGAG 58.961 38.462 3.35 0.00 45.54 2.85
3886 4768 4.269183 ACCAACAACTTTGATGTCAGTCA 58.731 39.130 0.00 0.00 29.99 3.41
3898 4780 6.298441 TGATGTCAGTCATATTCTTGGTCA 57.702 37.500 0.00 0.00 36.83 4.02
4151 5033 7.425577 TCTTCACATTGATGTAAGTGTTCAG 57.574 36.000 0.00 0.00 39.39 3.02
4217 5099 1.669779 GCAGGTGCTCTTGCTTATCTG 59.330 52.381 14.82 0.00 42.25 2.90
4917 5802 2.773661 AGCACACAGTGGGATGATCATA 59.226 45.455 7.11 0.00 33.64 2.15
4929 5814 6.820656 GTGGGATGATCATATGCTTACTAAGG 59.179 42.308 8.54 0.00 0.00 2.69
4933 5818 7.550906 GGATGATCATATGCTTACTAAGGTTCC 59.449 40.741 8.54 0.00 0.00 3.62
5001 5890 3.067461 TGCAATGCACGTAGTTCCTTTTT 59.933 39.130 2.72 0.00 41.61 1.94
5192 6090 9.680315 ACTACTCATTAGCAATAATACTCGAAC 57.320 33.333 0.00 0.00 0.00 3.95
5241 6139 5.245751 TGAGCAATGGTGAATAAATGTTGGT 59.754 36.000 0.00 0.00 0.00 3.67
5247 6145 8.431593 CAATGGTGAATAAATGTTGGTTTAACG 58.568 33.333 0.00 0.00 42.34 3.18
5305 6203 7.713073 TGATGTGAGTTATGTGTGTTTGTTAGA 59.287 33.333 0.00 0.00 0.00 2.10
5306 6204 8.621532 ATGTGAGTTATGTGTGTTTGTTAGAT 57.378 30.769 0.00 0.00 0.00 1.98
5317 6215 9.542462 TGTGTGTTTGTTAGATATATAGAAGCC 57.458 33.333 0.00 0.00 0.00 4.35
5336 6234 2.874457 GCCCTACTTCGCCAGAAAAGAA 60.874 50.000 0.00 0.00 35.71 2.52
5345 6243 2.328473 GCCAGAAAAGAATGCGGAAAC 58.672 47.619 0.00 0.00 0.00 2.78
5376 6274 4.023980 GGATTTGTAAAGCCTAAAGCCCT 58.976 43.478 4.48 0.00 45.47 5.19
5447 6345 8.153550 AGAATAGTCATTCCTTTTATCTGCGAT 58.846 33.333 0.00 0.00 41.37 4.58
5450 6348 7.897575 AGTCATTCCTTTTATCTGCGATATC 57.102 36.000 0.00 0.00 0.00 1.63
5451 6349 6.876257 AGTCATTCCTTTTATCTGCGATATCC 59.124 38.462 0.00 0.00 0.00 2.59
5495 6393 4.320456 CGTGTGGTGGCCTCAGCT 62.320 66.667 3.32 0.00 41.59 4.24
5508 6406 1.078918 TCAGCTGCGAAGGGTGATG 60.079 57.895 9.47 0.00 36.48 3.07
5517 6415 1.741732 CGAAGGGTGATGCTTCTCCTG 60.742 57.143 17.31 5.11 36.08 3.86
5552 6450 0.742635 GTAGAGTGCTCTGCCTTGGC 60.743 60.000 11.63 4.43 40.71 4.52
5553 6451 2.230994 TAGAGTGCTCTGCCTTGGCG 62.231 60.000 11.63 2.49 40.71 5.69
5599 6497 2.738521 GCCGTCGAGAAGCAGCAA 60.739 61.111 0.00 0.00 0.00 3.91
5687 6585 4.052518 GTGCTGGGGGCTGGTGAT 62.053 66.667 0.00 0.00 42.39 3.06
5688 6586 4.051167 TGCTGGGGGCTGGTGATG 62.051 66.667 0.00 0.00 42.39 3.07
5689 6587 3.731728 GCTGGGGGCTGGTGATGA 61.732 66.667 0.00 0.00 38.06 2.92
5690 6588 3.089838 CTGGGGGCTGGTGATGAA 58.910 61.111 0.00 0.00 0.00 2.57
5691 6589 1.077212 CTGGGGGCTGGTGATGAAG 60.077 63.158 0.00 0.00 0.00 3.02
5692 6590 1.852157 TGGGGGCTGGTGATGAAGT 60.852 57.895 0.00 0.00 0.00 3.01
5693 6591 1.077429 GGGGGCTGGTGATGAAGTC 60.077 63.158 0.00 0.00 0.00 3.01
5694 6592 1.685224 GGGGCTGGTGATGAAGTCA 59.315 57.895 0.00 0.00 0.00 3.41
5695 6593 0.257039 GGGGCTGGTGATGAAGTCAT 59.743 55.000 0.00 0.00 39.48 3.06
5696 6594 1.386533 GGGCTGGTGATGAAGTCATG 58.613 55.000 0.00 0.00 39.48 3.07
5697 6595 1.340405 GGGCTGGTGATGAAGTCATGT 60.340 52.381 0.00 0.00 39.48 3.21
5698 6596 2.092968 GGGCTGGTGATGAAGTCATGTA 60.093 50.000 0.00 0.00 39.48 2.29
5699 6597 2.939103 GGCTGGTGATGAAGTCATGTAC 59.061 50.000 0.00 0.00 39.48 2.90
5700 6598 2.939103 GCTGGTGATGAAGTCATGTACC 59.061 50.000 13.61 13.61 39.48 3.34
5701 6599 3.369892 GCTGGTGATGAAGTCATGTACCT 60.370 47.826 18.19 0.00 39.26 3.08
5702 6600 4.141937 GCTGGTGATGAAGTCATGTACCTA 60.142 45.833 18.19 9.21 39.26 3.08
5703 6601 5.595885 CTGGTGATGAAGTCATGTACCTAG 58.404 45.833 18.19 12.77 39.26 3.02
5704 6602 4.405680 TGGTGATGAAGTCATGTACCTAGG 59.594 45.833 7.41 7.41 39.26 3.02
5705 6603 4.202264 GGTGATGAAGTCATGTACCTAGGG 60.202 50.000 14.81 0.00 39.48 3.53
5706 6604 4.406003 GTGATGAAGTCATGTACCTAGGGT 59.594 45.833 14.81 1.17 39.48 4.34
5707 6605 5.597182 GTGATGAAGTCATGTACCTAGGGTA 59.403 44.000 14.81 0.12 39.48 3.69
5708 6606 5.833667 TGATGAAGTCATGTACCTAGGGTAG 59.166 44.000 14.81 0.00 36.36 3.18
5709 6607 5.148502 ATGAAGTCATGTACCTAGGGTAGG 58.851 45.833 14.81 0.44 42.54 3.18
5710 6608 5.932271 ATGAAGTCATGTACCTAGGGTAGGG 60.932 48.000 14.81 0.00 41.79 3.53
5711 6609 8.311633 ATGAAGTCATGTACCTAGGGTAGGGT 62.312 46.154 14.81 0.00 41.79 4.34
5712 6610 9.992393 ATGAAGTCATGTACCTAGGGTAGGGTC 62.992 48.148 14.81 0.05 41.79 4.46
5716 6614 4.272245 CCTAGGGTAGGGTCACGG 57.728 66.667 0.00 0.00 42.42 4.94
5717 6615 1.457079 CCTAGGGTAGGGTCACGGG 60.457 68.421 0.00 0.00 42.42 5.28
5718 6616 2.042639 TAGGGTAGGGTCACGGGC 60.043 66.667 0.00 0.00 0.00 6.13
5719 6617 3.684369 TAGGGTAGGGTCACGGGCC 62.684 68.421 0.00 0.00 0.00 5.80
5721 6619 3.782443 GGTAGGGTCACGGGCCTG 61.782 72.222 11.02 11.02 0.00 4.85
5722 6620 3.001406 GTAGGGTCACGGGCCTGT 61.001 66.667 12.85 12.85 0.00 4.00
5723 6621 2.682494 TAGGGTCACGGGCCTGTC 60.682 66.667 16.42 4.22 0.00 3.51
5726 6624 3.948719 GGTCACGGGCCTGTCCAA 61.949 66.667 16.42 0.00 36.21 3.53
5727 6625 2.112297 GTCACGGGCCTGTCCAAA 59.888 61.111 16.42 0.00 36.21 3.28
5728 6626 1.966451 GTCACGGGCCTGTCCAAAG 60.966 63.158 16.42 2.96 36.21 2.77
5729 6627 2.113139 CACGGGCCTGTCCAAAGT 59.887 61.111 16.42 0.00 36.21 2.66
5730 6628 1.122632 TCACGGGCCTGTCCAAAGTA 61.123 55.000 16.42 0.00 36.21 2.24
5731 6629 0.953960 CACGGGCCTGTCCAAAGTAC 60.954 60.000 16.42 0.00 36.21 2.73
5732 6630 1.376812 CGGGCCTGTCCAAAGTACC 60.377 63.158 2.29 0.00 36.21 3.34
5733 6631 1.001269 GGGCCTGTCCAAAGTACCC 60.001 63.158 0.84 0.00 36.21 3.69
5734 6632 1.498176 GGGCCTGTCCAAAGTACCCT 61.498 60.000 0.84 0.00 36.21 4.34
5735 6633 0.035343 GGCCTGTCCAAAGTACCCTC 60.035 60.000 0.00 0.00 34.01 4.30
5736 6634 0.035343 GCCTGTCCAAAGTACCCTCC 60.035 60.000 0.00 0.00 0.00 4.30
5737 6635 0.618981 CCTGTCCAAAGTACCCTCCC 59.381 60.000 0.00 0.00 0.00 4.30
5738 6636 0.618981 CTGTCCAAAGTACCCTCCCC 59.381 60.000 0.00 0.00 0.00 4.81
5739 6637 0.104356 TGTCCAAAGTACCCTCCCCA 60.104 55.000 0.00 0.00 0.00 4.96
5740 6638 1.069775 GTCCAAAGTACCCTCCCCAA 58.930 55.000 0.00 0.00 0.00 4.12
5741 6639 1.004394 GTCCAAAGTACCCTCCCCAAG 59.996 57.143 0.00 0.00 0.00 3.61
5742 6640 0.331616 CCAAAGTACCCTCCCCAAGG 59.668 60.000 0.00 0.00 45.77 3.61
5752 6650 2.706339 CTCCCCAAGGACATCTTCAG 57.294 55.000 0.00 0.00 37.19 3.02
5753 6651 2.191400 CTCCCCAAGGACATCTTCAGA 58.809 52.381 0.00 0.00 37.19 3.27
5754 6652 2.573462 CTCCCCAAGGACATCTTCAGAA 59.427 50.000 0.00 0.00 37.19 3.02
5755 6653 2.573462 TCCCCAAGGACATCTTCAGAAG 59.427 50.000 3.45 3.45 37.19 2.85
5756 6654 2.573462 CCCCAAGGACATCTTCAGAAGA 59.427 50.000 15.44 15.44 37.33 2.87
5757 6655 3.009473 CCCCAAGGACATCTTCAGAAGAA 59.991 47.826 17.00 1.11 36.72 2.52
5758 6656 4.866068 CCCCAAGGACATCTTCAGAAGAAG 60.866 50.000 17.00 14.80 43.70 2.85
5768 6666 4.543590 CTTCAGAAGAAGCTACCTTCCA 57.456 45.455 19.34 8.66 46.97 3.53
5769 6667 4.502962 CTTCAGAAGAAGCTACCTTCCAG 58.497 47.826 19.34 14.49 46.97 3.86
5770 6668 3.511477 TCAGAAGAAGCTACCTTCCAGT 58.489 45.455 19.34 4.84 46.97 4.00
5771 6669 3.511934 TCAGAAGAAGCTACCTTCCAGTC 59.488 47.826 19.34 0.00 46.97 3.51
5772 6670 2.494073 AGAAGAAGCTACCTTCCAGTCG 59.506 50.000 19.34 0.00 46.97 4.18
5773 6671 2.217510 AGAAGCTACCTTCCAGTCGA 57.782 50.000 0.00 0.00 46.97 4.20
5774 6672 1.819903 AGAAGCTACCTTCCAGTCGAC 59.180 52.381 7.70 7.70 46.97 4.20
5775 6673 0.896226 AAGCTACCTTCCAGTCGACC 59.104 55.000 13.01 0.00 0.00 4.79
5776 6674 0.251653 AGCTACCTTCCAGTCGACCA 60.252 55.000 13.01 0.00 0.00 4.02
5777 6675 0.606604 GCTACCTTCCAGTCGACCAA 59.393 55.000 13.01 1.85 0.00 3.67
5778 6676 1.404315 GCTACCTTCCAGTCGACCAAG 60.404 57.143 13.01 11.76 0.00 3.61
5779 6677 2.168496 CTACCTTCCAGTCGACCAAGA 58.832 52.381 13.01 3.63 0.00 3.02
5780 6678 0.969894 ACCTTCCAGTCGACCAAGAG 59.030 55.000 13.01 5.82 0.00 2.85
5781 6679 0.247736 CCTTCCAGTCGACCAAGAGG 59.752 60.000 13.01 11.26 42.21 3.69
5782 6680 0.247736 CTTCCAGTCGACCAAGAGGG 59.752 60.000 13.01 4.87 44.81 4.30
5783 6681 0.178944 TTCCAGTCGACCAAGAGGGA 60.179 55.000 13.01 7.22 41.15 4.20
5784 6682 0.041238 TCCAGTCGACCAAGAGGGAT 59.959 55.000 13.01 0.00 41.15 3.85
5785 6683 0.905357 CCAGTCGACCAAGAGGGATT 59.095 55.000 13.01 0.00 41.15 3.01
5786 6684 1.134670 CCAGTCGACCAAGAGGGATTC 60.135 57.143 13.01 0.00 41.15 2.52
5787 6685 1.134670 CAGTCGACCAAGAGGGATTCC 60.135 57.143 13.01 0.00 41.15 3.01
5788 6686 0.902531 GTCGACCAAGAGGGATTCCA 59.097 55.000 3.51 0.00 41.15 3.53
5789 6687 0.902531 TCGACCAAGAGGGATTCCAC 59.097 55.000 4.80 0.00 41.15 4.02
5790 6688 0.905357 CGACCAAGAGGGATTCCACT 59.095 55.000 4.80 0.46 41.15 4.00
5791 6689 1.134670 CGACCAAGAGGGATTCCACTC 60.135 57.143 4.80 8.78 41.15 3.51
5792 6690 0.905357 ACCAAGAGGGATTCCACTCG 59.095 55.000 4.80 0.31 41.15 4.18
5793 6691 1.195115 CCAAGAGGGATTCCACTCGA 58.805 55.000 4.80 0.00 40.01 4.04
5794 6692 1.134670 CCAAGAGGGATTCCACTCGAC 60.135 57.143 4.80 0.00 40.01 4.20
5795 6693 0.818296 AAGAGGGATTCCACTCGACG 59.182 55.000 4.80 0.00 38.72 5.12
5796 6694 1.038130 AGAGGGATTCCACTCGACGG 61.038 60.000 4.80 0.00 38.72 4.79
5797 6695 1.000019 AGGGATTCCACTCGACGGA 60.000 57.895 4.80 0.00 34.83 4.69
5798 6696 1.141234 GGGATTCCACTCGACGGAC 59.859 63.158 4.80 0.00 30.29 4.79
5799 6697 1.321074 GGGATTCCACTCGACGGACT 61.321 60.000 4.80 0.00 30.29 3.85
5800 6698 0.100861 GGATTCCACTCGACGGACTC 59.899 60.000 0.00 7.59 32.78 3.36
5801 6699 0.248134 GATTCCACTCGACGGACTCG 60.248 60.000 0.00 0.00 44.44 4.18
5808 6706 4.436653 CGACGGACTCGAAGACAC 57.563 61.111 0.00 0.00 46.14 3.67
5809 6707 1.867615 CGACGGACTCGAAGACACT 59.132 57.895 0.00 0.00 46.14 3.55
5810 6708 0.179220 CGACGGACTCGAAGACACTC 60.179 60.000 0.00 0.00 46.14 3.51
5811 6709 0.179220 GACGGACTCGAAGACACTCG 60.179 60.000 0.00 0.00 40.11 4.18
5812 6710 0.602106 ACGGACTCGAAGACACTCGA 60.602 55.000 0.00 0.00 45.22 4.04
5813 6711 0.179220 CGGACTCGAAGACACTCGAC 60.179 60.000 0.00 0.00 42.69 4.20
5814 6712 0.179220 GGACTCGAAGACACTCGACG 60.179 60.000 0.00 0.00 42.69 5.12
5815 6713 0.788995 GACTCGAAGACACTCGACGA 59.211 55.000 0.00 0.00 42.69 4.20
5816 6714 1.394227 GACTCGAAGACACTCGACGAT 59.606 52.381 0.00 0.00 42.69 3.73
5817 6715 1.128878 ACTCGAAGACACTCGACGATG 59.871 52.381 0.00 1.90 42.69 3.84
5818 6716 1.393883 CTCGAAGACACTCGACGATGA 59.606 52.381 0.00 0.00 42.69 2.92
5819 6717 1.802365 TCGAAGACACTCGACGATGAA 59.198 47.619 0.00 0.00 42.69 2.57
5820 6718 2.159693 TCGAAGACACTCGACGATGAAG 60.160 50.000 0.00 0.00 42.69 3.02
5821 6719 2.159693 CGAAGACACTCGACGATGAAGA 60.160 50.000 0.00 0.00 41.44 2.87
5822 6720 2.904011 AGACACTCGACGATGAAGAC 57.096 50.000 0.00 0.00 0.00 3.01
5823 6721 2.428491 AGACACTCGACGATGAAGACT 58.572 47.619 0.00 0.00 0.00 3.24
5824 6722 2.417239 AGACACTCGACGATGAAGACTC 59.583 50.000 0.00 0.00 0.00 3.36
5825 6723 2.152016 ACACTCGACGATGAAGACTCA 58.848 47.619 0.00 0.00 35.56 3.41
5826 6724 2.095668 ACACTCGACGATGAAGACTCAC 60.096 50.000 0.00 0.00 33.30 3.51
5827 6725 2.160615 CACTCGACGATGAAGACTCACT 59.839 50.000 0.00 0.00 33.30 3.41
5828 6726 2.417239 ACTCGACGATGAAGACTCACTC 59.583 50.000 0.00 0.00 33.30 3.51
5829 6727 1.393883 TCGACGATGAAGACTCACTCG 59.606 52.381 0.00 0.00 37.98 4.18
5830 6728 1.393883 CGACGATGAAGACTCACTCGA 59.606 52.381 7.31 0.00 36.71 4.04
5831 6729 2.776330 GACGATGAAGACTCACTCGAC 58.224 52.381 7.31 0.00 36.71 4.20
5832 6730 1.469308 ACGATGAAGACTCACTCGACC 59.531 52.381 7.31 0.00 36.71 4.79
5833 6731 1.468914 CGATGAAGACTCACTCGACCA 59.531 52.381 0.00 0.00 35.98 4.02
5834 6732 2.729467 CGATGAAGACTCACTCGACCAC 60.729 54.545 0.00 0.00 35.98 4.16
5835 6733 0.959553 TGAAGACTCACTCGACCACC 59.040 55.000 0.00 0.00 0.00 4.61
5836 6734 0.959553 GAAGACTCACTCGACCACCA 59.040 55.000 0.00 0.00 0.00 4.17
5837 6735 1.340248 GAAGACTCACTCGACCACCAA 59.660 52.381 0.00 0.00 0.00 3.67
5838 6736 0.962489 AGACTCACTCGACCACCAAG 59.038 55.000 0.00 0.00 0.00 3.61
5839 6737 0.959553 GACTCACTCGACCACCAAGA 59.040 55.000 0.00 0.00 0.00 3.02
5840 6738 0.962489 ACTCACTCGACCACCAAGAG 59.038 55.000 0.00 0.00 37.96 2.85
5841 6739 1.248486 CTCACTCGACCACCAAGAGA 58.752 55.000 0.00 0.00 36.03 3.10
5842 6740 0.959553 TCACTCGACCACCAAGAGAC 59.040 55.000 0.00 0.00 36.03 3.36
5843 6741 0.038159 CACTCGACCACCAAGAGACC 60.038 60.000 0.00 0.00 36.03 3.85
5844 6742 0.469331 ACTCGACCACCAAGAGACCA 60.469 55.000 0.00 0.00 36.03 4.02
5845 6743 0.679505 CTCGACCACCAAGAGACCAA 59.320 55.000 0.00 0.00 34.13 3.67
5846 6744 0.679505 TCGACCACCAAGAGACCAAG 59.320 55.000 0.00 0.00 0.00 3.61
5847 6745 0.679505 CGACCACCAAGAGACCAAGA 59.320 55.000 0.00 0.00 0.00 3.02
5848 6746 1.337260 CGACCACCAAGAGACCAAGAG 60.337 57.143 0.00 0.00 0.00 2.85
5849 6747 0.398318 ACCACCAAGAGACCAAGAGC 59.602 55.000 0.00 0.00 0.00 4.09
5850 6748 0.322008 CCACCAAGAGACCAAGAGCC 60.322 60.000 0.00 0.00 0.00 4.70
5851 6749 0.397941 CACCAAGAGACCAAGAGCCA 59.602 55.000 0.00 0.00 0.00 4.75
5852 6750 0.398318 ACCAAGAGACCAAGAGCCAC 59.602 55.000 0.00 0.00 0.00 5.01
5853 6751 0.689623 CCAAGAGACCAAGAGCCACT 59.310 55.000 0.00 0.00 0.00 4.00
5854 6752 1.338579 CCAAGAGACCAAGAGCCACTC 60.339 57.143 0.00 0.00 0.00 3.51
5855 6753 1.622811 CAAGAGACCAAGAGCCACTCT 59.377 52.381 0.00 0.00 43.37 3.24
5856 6754 1.265236 AGAGACCAAGAGCCACTCTG 58.735 55.000 0.00 0.00 40.28 3.35
5857 6755 0.390998 GAGACCAAGAGCCACTCTGC 60.391 60.000 0.00 0.00 40.28 4.26
5858 6756 1.123861 AGACCAAGAGCCACTCTGCA 61.124 55.000 0.00 0.00 40.28 4.41
5859 6757 0.035630 GACCAAGAGCCACTCTGCAT 60.036 55.000 0.00 0.00 40.28 3.96
5860 6758 0.035630 ACCAAGAGCCACTCTGCATC 60.036 55.000 0.00 0.00 40.28 3.91
5861 6759 0.747283 CCAAGAGCCACTCTGCATCC 60.747 60.000 0.00 0.00 40.28 3.51
5862 6760 0.035725 CAAGAGCCACTCTGCATCCA 60.036 55.000 0.00 0.00 40.28 3.41
5863 6761 0.694771 AAGAGCCACTCTGCATCCAA 59.305 50.000 0.00 0.00 40.28 3.53
5864 6762 0.694771 AGAGCCACTCTGCATCCAAA 59.305 50.000 0.00 0.00 39.62 3.28
5865 6763 0.807496 GAGCCACTCTGCATCCAAAC 59.193 55.000 0.00 0.00 0.00 2.93
5866 6764 0.957395 AGCCACTCTGCATCCAAACG 60.957 55.000 0.00 0.00 0.00 3.60
5867 6765 1.926511 GCCACTCTGCATCCAAACGG 61.927 60.000 0.00 0.00 0.00 4.44
5868 6766 0.606401 CCACTCTGCATCCAAACGGT 60.606 55.000 0.00 0.00 0.00 4.83
5869 6767 0.798776 CACTCTGCATCCAAACGGTC 59.201 55.000 0.00 0.00 0.00 4.79
5870 6768 0.687354 ACTCTGCATCCAAACGGTCT 59.313 50.000 0.00 0.00 0.00 3.85
5871 6769 1.081892 CTCTGCATCCAAACGGTCTG 58.918 55.000 0.00 0.00 0.00 3.51
5872 6770 0.396435 TCTGCATCCAAACGGTCTGT 59.604 50.000 0.00 0.00 0.00 3.41
5873 6771 1.621317 TCTGCATCCAAACGGTCTGTA 59.379 47.619 0.00 0.00 0.00 2.74
5874 6772 2.037902 TCTGCATCCAAACGGTCTGTAA 59.962 45.455 0.00 0.00 0.00 2.41
5875 6773 3.009723 CTGCATCCAAACGGTCTGTAAT 58.990 45.455 0.00 0.00 0.00 1.89
5876 6774 3.417101 TGCATCCAAACGGTCTGTAATT 58.583 40.909 0.00 0.00 0.00 1.40
5877 6775 4.580868 TGCATCCAAACGGTCTGTAATTA 58.419 39.130 0.00 0.00 0.00 1.40
5878 6776 5.004448 TGCATCCAAACGGTCTGTAATTAA 58.996 37.500 0.00 0.00 0.00 1.40
5879 6777 5.123186 TGCATCCAAACGGTCTGTAATTAAG 59.877 40.000 0.00 0.00 0.00 1.85
5880 6778 5.123344 GCATCCAAACGGTCTGTAATTAAGT 59.877 40.000 0.00 0.00 0.00 2.24
5881 6779 6.314400 GCATCCAAACGGTCTGTAATTAAGTA 59.686 38.462 0.00 0.00 0.00 2.24
5882 6780 7.465513 GCATCCAAACGGTCTGTAATTAAGTAG 60.466 40.741 0.00 0.00 0.00 2.57
5883 6781 6.996509 TCCAAACGGTCTGTAATTAAGTAGT 58.003 36.000 0.00 0.00 0.00 2.73
5884 6782 7.092716 TCCAAACGGTCTGTAATTAAGTAGTC 58.907 38.462 0.00 0.00 0.00 2.59
5885 6783 7.039504 TCCAAACGGTCTGTAATTAAGTAGTCT 60.040 37.037 0.00 0.00 0.00 3.24
5886 6784 7.601508 CCAAACGGTCTGTAATTAAGTAGTCTT 59.398 37.037 0.00 0.00 37.65 3.01
5887 6785 8.985805 CAAACGGTCTGTAATTAAGTAGTCTTT 58.014 33.333 0.00 0.00 35.36 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.897969 AGGTATAGGGTAACGGAGCATG 59.102 50.000 0.00 0.00 37.60 4.06
3 4 2.761786 AGGTATAGGGTAACGGAGCA 57.238 50.000 0.00 0.00 37.60 4.26
4 5 5.735285 AATAAGGTATAGGGTAACGGAGC 57.265 43.478 0.00 0.00 37.60 4.70
5 6 8.810041 ACAATAATAAGGTATAGGGTAACGGAG 58.190 37.037 0.00 0.00 37.60 4.63
6 7 8.725606 ACAATAATAAGGTATAGGGTAACGGA 57.274 34.615 0.00 0.00 37.60 4.69
7 8 7.756722 CGACAATAATAAGGTATAGGGTAACGG 59.243 40.741 0.00 0.00 37.60 4.44
8 9 7.756722 CCGACAATAATAAGGTATAGGGTAACG 59.243 40.741 0.00 0.00 37.60 3.18
9 10 8.806146 TCCGACAATAATAAGGTATAGGGTAAC 58.194 37.037 0.00 0.00 0.00 2.50
10 11 8.954834 TCCGACAATAATAAGGTATAGGGTAA 57.045 34.615 0.00 0.00 0.00 2.85
11 12 8.954834 TTCCGACAATAATAAGGTATAGGGTA 57.045 34.615 0.00 0.00 0.00 3.69
12 13 7.860649 TTCCGACAATAATAAGGTATAGGGT 57.139 36.000 0.00 0.00 0.00 4.34
13 14 7.705325 CGATTCCGACAATAATAAGGTATAGGG 59.295 40.741 0.00 0.00 38.22 3.53
14 15 8.248945 ACGATTCCGACAATAATAAGGTATAGG 58.751 37.037 0.00 0.00 39.50 2.57
15 16 9.635520 AACGATTCCGACAATAATAAGGTATAG 57.364 33.333 0.00 0.00 39.50 1.31
16 17 9.630098 GAACGATTCCGACAATAATAAGGTATA 57.370 33.333 0.00 0.00 39.50 1.47
17 18 7.601508 GGAACGATTCCGACAATAATAAGGTAT 59.398 37.037 0.00 0.00 40.59 2.73
18 19 6.925165 GGAACGATTCCGACAATAATAAGGTA 59.075 38.462 0.00 0.00 40.59 3.08
19 20 5.756833 GGAACGATTCCGACAATAATAAGGT 59.243 40.000 0.00 0.00 40.59 3.50
20 21 6.224420 GGAACGATTCCGACAATAATAAGG 57.776 41.667 0.00 0.00 40.59 2.69
34 35 1.722011 ATGTGTCGTGGGAACGATTC 58.278 50.000 4.09 2.22 44.29 2.52
35 36 3.536956 ATATGTGTCGTGGGAACGATT 57.463 42.857 4.09 0.00 44.29 3.34
36 37 3.194861 CAATATGTGTCGTGGGAACGAT 58.805 45.455 4.09 0.00 44.29 3.73
37 38 2.028839 ACAATATGTGTCGTGGGAACGA 60.029 45.455 0.00 0.00 34.38 3.85
38 39 2.343101 ACAATATGTGTCGTGGGAACG 58.657 47.619 0.00 0.00 34.38 3.95
48 49 8.768501 TCTCCACTATTAGAGACAATATGTGT 57.231 34.615 0.00 0.00 45.74 3.72
64 65 4.223032 ACCTTGTCACGAATTCTCCACTAT 59.777 41.667 3.52 0.00 0.00 2.12
67 68 2.480419 CACCTTGTCACGAATTCTCCAC 59.520 50.000 3.52 0.00 0.00 4.02
70 71 4.989168 ACTAACACCTTGTCACGAATTCTC 59.011 41.667 3.52 0.00 0.00 2.87
78 79 8.086522 TCATAAGTCTTACTAACACCTTGTCAC 58.913 37.037 0.00 0.00 0.00 3.67
79 80 8.185506 TCATAAGTCTTACTAACACCTTGTCA 57.814 34.615 0.00 0.00 0.00 3.58
80 81 9.088512 CATCATAAGTCTTACTAACACCTTGTC 57.911 37.037 0.00 0.00 0.00 3.18
104 105 5.892348 AGATGGAGGGAGTAACAAAAACAT 58.108 37.500 0.00 0.00 0.00 2.71
107 108 4.564821 CCGAGATGGAGGGAGTAACAAAAA 60.565 45.833 0.00 0.00 42.00 1.94
113 114 1.776662 CACCGAGATGGAGGGAGTAA 58.223 55.000 0.00 0.00 42.00 2.24
252 253 8.914654 CAACCTAAAACAATGTTACATGTCATG 58.085 33.333 11.41 11.41 0.00 3.07
283 284 8.265055 ACATCCATTTTAGTAAAGTAGCTAGCA 58.735 33.333 18.83 0.00 0.00 3.49
288 289 6.459710 GCCCACATCCATTTTAGTAAAGTAGC 60.460 42.308 0.00 0.00 0.00 3.58
297 298 4.741321 ACAATGCCCACATCCATTTTAG 57.259 40.909 0.00 0.00 34.62 1.85
306 307 2.389962 GCATCAAACAATGCCCACAT 57.610 45.000 0.00 0.00 45.07 3.21
330 331 1.677490 AAAAGAGGATTACCCCCGGT 58.323 50.000 0.00 0.00 40.16 5.28
331 332 2.651455 GAAAAAGAGGATTACCCCCGG 58.349 52.381 0.00 0.00 36.73 5.73
446 447 6.989759 ACTTGTGGAAAACAAATCCCATTAAC 59.010 34.615 0.00 0.00 44.97 2.01
458 459 4.141574 ACCAGCTACTACTTGTGGAAAACA 60.142 41.667 0.00 0.00 36.85 2.83
475 476 9.025041 AGCTAAAACATTATAAAGAAACCAGCT 57.975 29.630 0.00 0.00 0.00 4.24
650 654 6.044754 TCCTCTATGATTGGGATTGTATTGCT 59.955 38.462 0.00 0.00 0.00 3.91
757 764 7.284919 TGTTCTCTGATGTACAGTTAAGTCA 57.715 36.000 0.33 0.00 45.86 3.41
814 842 4.630940 CACAATTAATTTGGCGCCTTCATT 59.369 37.500 29.70 22.79 39.80 2.57
893 921 5.509163 GCGAGCTCTTCATTACCATACCTTA 60.509 44.000 12.85 0.00 0.00 2.69
1068 1099 2.531522 TGCTGCTACGACATGCATAT 57.468 45.000 0.00 0.00 38.59 1.78
1174 1205 7.015779 TCCGTTCAGTATGTATGGATTTCCATA 59.984 37.037 14.05 14.05 45.15 2.74
1217 1248 9.231297 AGATAATTTGTACTGCAGTTGTAATGT 57.769 29.630 27.06 13.14 0.00 2.71
1220 1251 8.726988 GGAAGATAATTTGTACTGCAGTTGTAA 58.273 33.333 27.06 16.13 0.00 2.41
1221 1252 7.880713 TGGAAGATAATTTGTACTGCAGTTGTA 59.119 33.333 27.06 9.01 0.00 2.41
1224 1255 7.448469 AGTTGGAAGATAATTTGTACTGCAGTT 59.552 33.333 27.06 8.33 0.00 3.16
1225 1256 6.942576 AGTTGGAAGATAATTTGTACTGCAGT 59.057 34.615 25.12 25.12 0.00 4.40
1226 1257 7.383102 AGTTGGAAGATAATTTGTACTGCAG 57.617 36.000 13.48 13.48 0.00 4.41
1228 1259 8.175716 GTGTAGTTGGAAGATAATTTGTACTGC 58.824 37.037 0.00 0.00 0.00 4.40
1310 1350 1.395635 TGCATCACATGAATCCTGCC 58.604 50.000 0.00 0.00 0.00 4.85
1373 1414 6.268617 TGAGTAGCATGTCTAGCATAAATCCT 59.731 38.462 0.00 0.00 35.74 3.24
1417 1512 7.338957 TGATGCACATAACCAAAATGAGACATA 59.661 33.333 0.00 0.00 0.00 2.29
1468 1585 7.709182 TCGTTTTGCTACTAGTGCATAATGTAT 59.291 33.333 24.17 0.00 40.34 2.29
1475 1592 3.000727 GGTCGTTTTGCTACTAGTGCAT 58.999 45.455 17.03 0.00 40.34 3.96
1476 1593 2.036733 AGGTCGTTTTGCTACTAGTGCA 59.963 45.455 5.39 10.57 38.80 4.57
1477 1594 2.685100 AGGTCGTTTTGCTACTAGTGC 58.315 47.619 5.39 7.95 0.00 4.40
1487 1604 7.197703 ACAAACCAGTATTAAAGGTCGTTTTG 58.802 34.615 0.00 0.00 33.74 2.44
1510 1627 0.906775 CGGGACTAAAGGCCCTTACA 59.093 55.000 18.97 0.00 42.40 2.41
1546 1663 1.427753 ACCTTTAGTCCCCACCCTTTG 59.572 52.381 0.00 0.00 0.00 2.77
1644 1767 2.564062 CCAACCGGTACTAAAGGTCTCA 59.436 50.000 8.00 0.00 37.26 3.27
1671 1794 9.558396 TTTAGAAAAACCTTTAGTACCGATTGA 57.442 29.630 0.00 0.00 0.00 2.57
1756 1918 7.079451 TGAGGGGTGATTAGAGATTAAATCC 57.921 40.000 0.00 0.00 32.25 3.01
1812 2036 0.388907 CGGCCGGAAAGTTAGACGAA 60.389 55.000 20.10 0.00 0.00 3.85
1967 2194 5.389830 CGGTGAAATGTGTGACTTCATACTG 60.390 44.000 7.52 0.00 38.56 2.74
2079 2306 3.320826 GGTCAAACTGTGGGCAAACTATT 59.679 43.478 0.00 0.00 0.00 1.73
2088 2424 7.617041 TTTTTAATTTTGGTCAAACTGTGGG 57.383 32.000 0.00 0.00 0.00 4.61
2153 2558 6.422701 TGGTCAAACTATTGTCAAACTACTCG 59.577 38.462 0.00 0.00 37.79 4.18
2154 2559 7.225931 TGTGGTCAAACTATTGTCAAACTACTC 59.774 37.037 0.00 0.00 37.79 2.59
2157 2562 7.051623 ACTGTGGTCAAACTATTGTCAAACTA 58.948 34.615 0.00 0.00 37.79 2.24
2158 2563 5.885912 ACTGTGGTCAAACTATTGTCAAACT 59.114 36.000 0.00 0.00 37.79 2.66
2159 2564 6.131544 ACTGTGGTCAAACTATTGTCAAAC 57.868 37.500 0.00 0.00 37.79 2.93
2160 2565 6.767524 AACTGTGGTCAAACTATTGTCAAA 57.232 33.333 0.00 0.00 37.79 2.69
2161 2566 6.375736 TCAAACTGTGGTCAAACTATTGTCAA 59.624 34.615 0.00 0.00 37.79 3.18
2162 2567 5.883115 TCAAACTGTGGTCAAACTATTGTCA 59.117 36.000 0.00 0.00 37.79 3.58
2163 2568 6.199393 GTCAAACTGTGGTCAAACTATTGTC 58.801 40.000 0.00 0.00 37.79 3.18
2164 2569 5.067283 GGTCAAACTGTGGTCAAACTATTGT 59.933 40.000 0.00 0.00 37.79 2.71
2165 2570 5.067153 TGGTCAAACTGTGGTCAAACTATTG 59.933 40.000 0.00 0.00 37.92 1.90
2166 2571 5.197451 TGGTCAAACTGTGGTCAAACTATT 58.803 37.500 0.00 0.00 0.00 1.73
2167 2572 4.787551 TGGTCAAACTGTGGTCAAACTAT 58.212 39.130 0.00 0.00 0.00 2.12
2350 2779 6.751514 AAACGACCATATCTTTTGCATACA 57.248 33.333 0.00 0.00 28.12 2.29
2392 2821 3.951306 TGTTTCGACATGTTCTGCAAAG 58.049 40.909 0.00 0.00 0.00 2.77
2399 2831 3.975035 GCCTTTTCTGTTTCGACATGTTC 59.025 43.478 0.00 0.00 0.00 3.18
2603 3140 2.148768 CACAAACCGGGACTAAAGGAC 58.851 52.381 6.32 0.00 0.00 3.85
2604 3141 1.770061 ACACAAACCGGGACTAAAGGA 59.230 47.619 6.32 0.00 0.00 3.36
2710 3247 1.121378 TAGTCCCGGTTTGTGACACA 58.879 50.000 3.56 3.56 0.00 3.72
2723 3260 1.369625 CCACGAGCACATTTAGTCCC 58.630 55.000 0.00 0.00 0.00 4.46
2789 3326 2.937519 TCAATACAGGTTTGTGCCACA 58.062 42.857 0.00 0.00 38.23 4.17
2806 3343 1.670791 GGTCCGTGTTGAACCTTCAA 58.329 50.000 0.00 0.00 44.31 2.69
2808 3345 1.226030 CCGGTCCGTGTTGAACCTTC 61.226 60.000 11.06 0.00 0.00 3.46
2843 3380 1.835531 ACCATTAGTCCCGGTTCGAAT 59.164 47.619 0.00 0.00 0.00 3.34
2955 3492 3.033659 AGTACTAGTGCATGGCTAGGT 57.966 47.619 13.75 3.65 40.01 3.08
2983 3522 4.280425 TGTTGCCATTTTCATGAGTTAGCA 59.720 37.500 0.00 0.45 31.07 3.49
3086 3678 5.396362 GCAAGTTTGTATGCGCACATTATAG 59.604 40.000 14.90 0.00 37.74 1.31
3109 3701 7.800380 GTGTATGCAAATGTCACTATATTCTGC 59.200 37.037 0.00 0.00 0.00 4.26
3207 3809 6.930068 ACCAAACTATGTAGACACCTAACT 57.070 37.500 0.00 0.00 0.00 2.24
3215 3817 9.442033 GTTTGTAAACAACCAAACTATGTAGAC 57.558 33.333 7.74 0.00 44.34 2.59
3250 3852 6.540914 TCTTACCATTGACCATTATCGTTTCC 59.459 38.462 0.00 0.00 0.00 3.13
3256 3858 8.627208 ATGTGATCTTACCATTGACCATTATC 57.373 34.615 0.00 0.00 0.00 1.75
3323 3965 1.408453 ATCTACGCTACCCTTGGCCC 61.408 60.000 0.00 0.00 0.00 5.80
3396 4257 7.334171 CACTCATTGACATCTGTAAATGGTACA 59.666 37.037 16.79 1.57 43.79 2.90
3492 4354 4.789012 TGGATCAAACTCTTTTCCATGC 57.211 40.909 0.00 0.00 31.67 4.06
3704 4586 2.078849 TGTTGATGAGTACTGTGGCG 57.921 50.000 0.00 0.00 0.00 5.69
3772 4654 4.222124 TCCAAGAGTAGGCCTTGATTTC 57.778 45.455 12.58 1.80 42.57 2.17
3886 4768 5.919348 ATGTCCTCCATGACCAAGAATAT 57.081 39.130 0.00 0.00 34.25 1.28
3898 4780 1.852157 AACCGTGCCATGTCCTCCAT 61.852 55.000 0.00 0.00 0.00 3.41
4151 5033 4.035208 CGATCACCCCATAAAAGTAAGCAC 59.965 45.833 0.00 0.00 0.00 4.40
4217 5099 1.520120 TATCGCAGCAGCTGAGTGC 60.520 57.895 27.39 24.47 44.35 4.40
4505 5387 3.582714 AAGTAATGAGCCAAGCTTTGC 57.417 42.857 14.44 14.44 39.88 3.68
4797 5682 2.493278 AGCCAACATTACTGACAATGCC 59.507 45.455 6.65 0.00 39.13 4.40
4929 5814 0.250901 ACTGACATGCACCTGGGAAC 60.251 55.000 0.00 0.00 0.00 3.62
4933 5818 1.453155 GGTAACTGACATGCACCTGG 58.547 55.000 0.00 0.00 0.00 4.45
5001 5890 4.518278 ATTTACATGCCATACTCCCACA 57.482 40.909 0.00 0.00 0.00 4.17
5150 6048 6.605471 TGAGTAGTGAGAAATGTGTATGGT 57.395 37.500 0.00 0.00 0.00 3.55
5153 6051 8.478066 TGCTAATGAGTAGTGAGAAATGTGTAT 58.522 33.333 0.00 0.00 31.78 2.29
5188 6086 7.494625 ACCAATGACTAATGTATTACAGGTTCG 59.505 37.037 2.53 0.00 0.00 3.95
5221 6119 8.431593 CGTTAAACCAACATTTATTCACCATTG 58.568 33.333 0.00 0.00 36.92 2.82
5222 6120 7.117092 GCGTTAAACCAACATTTATTCACCATT 59.883 33.333 0.00 0.00 36.92 3.16
5223 6121 6.588373 GCGTTAAACCAACATTTATTCACCAT 59.412 34.615 0.00 0.00 36.92 3.55
5247 6145 7.287235 AGTCCGTCCCATAATATAATAGTAGGC 59.713 40.741 0.00 0.00 0.00 3.93
5316 6214 2.762535 TCTTTTCTGGCGAAGTAGGG 57.237 50.000 0.00 0.00 0.00 3.53
5317 6215 3.181506 GCATTCTTTTCTGGCGAAGTAGG 60.182 47.826 0.00 0.00 0.00 3.18
5336 6234 7.725251 ACAAATCCATAATTATGTTTCCGCAT 58.275 30.769 21.20 0.95 31.82 4.73
5408 6306 9.856488 GGAATGACTATTCTTTTTCCCTAAAAC 57.144 33.333 0.00 0.00 41.92 2.43
5447 6345 2.499515 GAAGGGGAGGGGAAAAGGATA 58.500 52.381 0.00 0.00 0.00 2.59
5450 6348 1.697910 GGAAGGGGAGGGGAAAAGG 59.302 63.158 0.00 0.00 0.00 3.11
5451 6349 1.303282 CGGAAGGGGAGGGGAAAAG 59.697 63.158 0.00 0.00 0.00 2.27
5480 6378 4.648626 GCAGCTGAGGCCACCACA 62.649 66.667 20.43 0.00 39.73 4.17
5495 6393 0.391661 GAGAAGCATCACCCTTCGCA 60.392 55.000 0.00 0.00 42.63 5.10
5581 6479 4.742201 TGCTGCTTCTCGACGGCC 62.742 66.667 0.00 0.00 37.37 6.13
5599 6497 2.593436 CACCCGTTTCCAACCGCT 60.593 61.111 0.00 0.00 0.00 5.52
5604 6502 1.228124 CTGCCTCACCCGTTTCCAA 60.228 57.895 0.00 0.00 0.00 3.53
5615 6513 3.079478 ATCGGAGCAGCTGCCTCA 61.079 61.111 34.39 16.83 43.38 3.86
5679 6577 2.939103 GGTACATGACTTCATCACCAGC 59.061 50.000 0.00 0.00 41.24 4.85
5680 6578 4.478206 AGGTACATGACTTCATCACCAG 57.522 45.455 16.60 0.00 41.24 4.00
5681 6579 4.405680 CCTAGGTACATGACTTCATCACCA 59.594 45.833 16.60 6.78 41.24 4.17
5682 6580 4.202264 CCCTAGGTACATGACTTCATCACC 60.202 50.000 8.29 9.97 41.24 4.02
5683 6581 4.406003 ACCCTAGGTACATGACTTCATCAC 59.594 45.833 8.29 0.00 35.12 3.06
5684 6582 4.620723 ACCCTAGGTACATGACTTCATCA 58.379 43.478 8.29 0.00 36.34 3.07
5685 6583 5.244178 CCTACCCTAGGTACATGACTTCATC 59.756 48.000 8.29 0.00 41.18 2.92
5686 6584 5.148502 CCTACCCTAGGTACATGACTTCAT 58.851 45.833 8.29 0.00 41.18 2.57
5687 6585 4.543689 CCTACCCTAGGTACATGACTTCA 58.456 47.826 8.29 0.00 41.18 3.02
5688 6586 3.896272 CCCTACCCTAGGTACATGACTTC 59.104 52.174 8.29 0.00 44.73 3.01
5689 6587 3.274153 ACCCTACCCTAGGTACATGACTT 59.726 47.826 8.29 0.00 44.73 3.01
5690 6588 2.863879 ACCCTACCCTAGGTACATGACT 59.136 50.000 8.29 0.00 44.73 3.41
5691 6589 3.229293 GACCCTACCCTAGGTACATGAC 58.771 54.545 8.29 0.00 44.73 3.06
5692 6590 2.860679 TGACCCTACCCTAGGTACATGA 59.139 50.000 8.29 0.00 44.73 3.07
5693 6591 2.963782 GTGACCCTACCCTAGGTACATG 59.036 54.545 8.29 0.00 44.73 3.21
5694 6592 2.423947 CGTGACCCTACCCTAGGTACAT 60.424 54.545 8.29 0.00 44.73 2.29
5695 6593 1.064463 CGTGACCCTACCCTAGGTACA 60.064 57.143 8.29 0.00 44.73 2.90
5696 6594 1.685148 CGTGACCCTACCCTAGGTAC 58.315 60.000 8.29 0.00 44.73 3.34
5697 6595 0.552848 CCGTGACCCTACCCTAGGTA 59.447 60.000 8.29 0.00 44.73 3.08
5698 6596 1.309006 CCGTGACCCTACCCTAGGT 59.691 63.158 8.29 0.00 44.73 3.08
5699 6597 1.457079 CCCGTGACCCTACCCTAGG 60.457 68.421 0.06 0.06 45.81 3.02
5700 6598 2.132352 GCCCGTGACCCTACCCTAG 61.132 68.421 0.00 0.00 0.00 3.02
5701 6599 2.042639 GCCCGTGACCCTACCCTA 60.043 66.667 0.00 0.00 0.00 3.53
5704 6602 3.782443 CAGGCCCGTGACCCTACC 61.782 72.222 0.00 0.00 0.00 3.18
5705 6603 3.001406 ACAGGCCCGTGACCCTAC 61.001 66.667 0.00 0.00 0.00 3.18
5706 6604 2.682494 GACAGGCCCGTGACCCTA 60.682 66.667 0.00 0.00 0.00 3.53
5709 6607 3.485346 TTTGGACAGGCCCGTGACC 62.485 63.158 0.00 0.75 34.97 4.02
5710 6608 1.966451 CTTTGGACAGGCCCGTGAC 60.966 63.158 0.00 0.00 34.97 3.67
5711 6609 1.122632 TACTTTGGACAGGCCCGTGA 61.123 55.000 0.00 0.00 34.97 4.35
5712 6610 0.953960 GTACTTTGGACAGGCCCGTG 60.954 60.000 0.00 0.00 34.97 4.94
5713 6611 1.373812 GTACTTTGGACAGGCCCGT 59.626 57.895 0.00 0.00 34.97 5.28
5714 6612 1.376812 GGTACTTTGGACAGGCCCG 60.377 63.158 0.00 0.00 34.97 6.13
5715 6613 1.001269 GGGTACTTTGGACAGGCCC 60.001 63.158 0.00 0.00 34.97 5.80
5716 6614 0.035343 GAGGGTACTTTGGACAGGCC 60.035 60.000 0.00 0.00 37.10 5.19
5717 6615 0.035343 GGAGGGTACTTTGGACAGGC 60.035 60.000 0.00 0.00 0.00 4.85
5718 6616 0.618981 GGGAGGGTACTTTGGACAGG 59.381 60.000 0.00 0.00 0.00 4.00
5719 6617 0.618981 GGGGAGGGTACTTTGGACAG 59.381 60.000 0.00 0.00 0.00 3.51
5720 6618 0.104356 TGGGGAGGGTACTTTGGACA 60.104 55.000 0.00 0.00 0.00 4.02
5721 6619 1.004394 CTTGGGGAGGGTACTTTGGAC 59.996 57.143 0.00 0.00 0.00 4.02
5722 6620 1.368374 CTTGGGGAGGGTACTTTGGA 58.632 55.000 0.00 0.00 0.00 3.53
5723 6621 0.331616 CCTTGGGGAGGGTACTTTGG 59.668 60.000 0.00 0.00 42.26 3.28
5724 6622 1.004394 GTCCTTGGGGAGGGTACTTTG 59.996 57.143 0.00 0.00 46.31 2.77
5725 6623 1.369403 GTCCTTGGGGAGGGTACTTT 58.631 55.000 0.00 0.00 46.31 2.66
5726 6624 0.195096 TGTCCTTGGGGAGGGTACTT 59.805 55.000 0.00 0.00 46.31 2.24
5727 6625 0.421904 ATGTCCTTGGGGAGGGTACT 59.578 55.000 0.00 0.00 46.31 2.73
5728 6626 0.837940 GATGTCCTTGGGGAGGGTAC 59.162 60.000 0.00 0.00 46.31 3.34
5729 6627 0.722676 AGATGTCCTTGGGGAGGGTA 59.277 55.000 0.00 0.00 46.31 3.69
5730 6628 0.178831 AAGATGTCCTTGGGGAGGGT 60.179 55.000 0.00 0.00 46.31 4.34
5731 6629 0.548510 GAAGATGTCCTTGGGGAGGG 59.451 60.000 0.00 0.00 46.31 4.30
5733 6631 2.191400 TCTGAAGATGTCCTTGGGGAG 58.809 52.381 0.00 0.00 43.12 4.30
5734 6632 2.342406 TCTGAAGATGTCCTTGGGGA 57.658 50.000 0.00 0.00 39.70 4.81
5735 6633 2.573462 TCTTCTGAAGATGTCCTTGGGG 59.427 50.000 15.82 0.00 34.68 4.96
5736 6634 3.988976 TCTTCTGAAGATGTCCTTGGG 57.011 47.619 15.82 0.00 34.68 4.12
5744 6642 9.414163 ACTGGAAGGTAGCTTCTTCTGAAGATG 62.414 44.444 28.48 21.25 45.19 2.90
5745 6643 7.488325 ACTGGAAGGTAGCTTCTTCTGAAGAT 61.488 42.308 28.48 8.82 45.19 2.40
5746 6644 6.222410 ACTGGAAGGTAGCTTCTTCTGAAGA 61.222 44.000 28.48 15.82 45.19 2.87
5747 6645 4.020662 ACTGGAAGGTAGCTTCTTCTGAAG 60.021 45.833 28.48 19.03 45.17 3.02
5748 6646 3.904339 ACTGGAAGGTAGCTTCTTCTGAA 59.096 43.478 28.48 10.92 40.17 3.02
5749 6647 3.511477 ACTGGAAGGTAGCTTCTTCTGA 58.489 45.455 28.48 11.04 40.17 3.27
5750 6648 3.674682 CGACTGGAAGGTAGCTTCTTCTG 60.675 52.174 28.48 19.85 40.17 3.02
5751 6649 2.494073 CGACTGGAAGGTAGCTTCTTCT 59.506 50.000 28.48 14.20 40.17 2.85
5752 6650 2.492484 TCGACTGGAAGGTAGCTTCTTC 59.508 50.000 28.48 21.22 39.30 2.87
5753 6651 2.231721 GTCGACTGGAAGGTAGCTTCTT 59.768 50.000 28.48 16.30 39.30 2.52
5754 6652 1.819903 GTCGACTGGAAGGTAGCTTCT 59.180 52.381 28.48 13.49 39.30 2.85
5755 6653 1.135053 GGTCGACTGGAAGGTAGCTTC 60.135 57.143 23.52 23.52 39.30 3.86
5756 6654 0.896226 GGTCGACTGGAAGGTAGCTT 59.104 55.000 16.46 6.94 39.30 3.74
5757 6655 0.251653 TGGTCGACTGGAAGGTAGCT 60.252 55.000 16.46 0.00 39.30 3.32
5758 6656 0.606604 TTGGTCGACTGGAAGGTAGC 59.393 55.000 16.46 0.00 39.30 3.58
5759 6657 2.164624 CTCTTGGTCGACTGGAAGGTAG 59.835 54.545 16.46 6.26 39.30 3.18
5760 6658 2.168496 CTCTTGGTCGACTGGAAGGTA 58.832 52.381 16.46 0.66 39.30 3.08
5761 6659 0.969894 CTCTTGGTCGACTGGAAGGT 59.030 55.000 16.46 0.00 39.30 3.50
5762 6660 0.247736 CCTCTTGGTCGACTGGAAGG 59.752 60.000 16.46 13.35 39.30 3.46
5763 6661 0.247736 CCCTCTTGGTCGACTGGAAG 59.752 60.000 16.46 14.44 42.29 3.46
5764 6662 0.178944 TCCCTCTTGGTCGACTGGAA 60.179 55.000 16.46 5.36 34.77 3.53
5765 6663 0.041238 ATCCCTCTTGGTCGACTGGA 59.959 55.000 16.46 11.79 34.77 3.86
5766 6664 0.905357 AATCCCTCTTGGTCGACTGG 59.095 55.000 16.46 9.79 34.77 4.00
5767 6665 1.134670 GGAATCCCTCTTGGTCGACTG 60.135 57.143 16.46 6.47 34.77 3.51
5768 6666 1.196012 GGAATCCCTCTTGGTCGACT 58.804 55.000 16.46 0.00 34.77 4.18
5769 6667 0.902531 TGGAATCCCTCTTGGTCGAC 59.097 55.000 7.13 7.13 34.77 4.20
5770 6668 0.902531 GTGGAATCCCTCTTGGTCGA 59.097 55.000 0.00 0.00 34.77 4.20
5771 6669 0.905357 AGTGGAATCCCTCTTGGTCG 59.095 55.000 0.00 0.00 32.69 4.79
5772 6670 1.134670 CGAGTGGAATCCCTCTTGGTC 60.135 57.143 13.36 0.00 36.48 4.02
5773 6671 0.905357 CGAGTGGAATCCCTCTTGGT 59.095 55.000 13.36 0.00 36.48 3.67
5774 6672 1.134670 GTCGAGTGGAATCCCTCTTGG 60.135 57.143 13.36 2.26 37.80 3.61
5775 6673 1.469940 CGTCGAGTGGAATCCCTCTTG 60.470 57.143 13.36 8.62 36.48 3.02
5776 6674 0.818296 CGTCGAGTGGAATCCCTCTT 59.182 55.000 13.36 0.00 36.48 2.85
5777 6675 1.038130 CCGTCGAGTGGAATCCCTCT 61.038 60.000 13.36 5.30 38.87 3.69
5778 6676 1.035932 TCCGTCGAGTGGAATCCCTC 61.036 60.000 3.87 2.29 30.98 4.30
5779 6677 1.000019 TCCGTCGAGTGGAATCCCT 60.000 57.895 3.87 0.00 30.98 4.20
5780 6678 1.141234 GTCCGTCGAGTGGAATCCC 59.859 63.158 7.86 0.00 37.23 3.85
5781 6679 0.100861 GAGTCCGTCGAGTGGAATCC 59.899 60.000 18.58 0.00 43.10 3.01
5782 6680 3.626154 GAGTCCGTCGAGTGGAATC 57.374 57.895 15.69 15.69 42.57 2.52
5792 6690 0.179220 CGAGTGTCTTCGAGTCCGTC 60.179 60.000 0.00 0.00 43.03 4.79
5793 6691 0.602106 TCGAGTGTCTTCGAGTCCGT 60.602 55.000 0.00 0.00 44.00 4.69
5794 6692 2.160063 TCGAGTGTCTTCGAGTCCG 58.840 57.895 0.00 0.00 44.00 4.79
5799 6697 1.435577 TCATCGTCGAGTGTCTTCGA 58.564 50.000 0.00 0.00 46.41 3.71
5800 6698 2.159693 TCTTCATCGTCGAGTGTCTTCG 60.160 50.000 0.00 0.00 41.79 3.79
5801 6699 3.120130 AGTCTTCATCGTCGAGTGTCTTC 60.120 47.826 0.00 0.00 0.00 2.87
5802 6700 2.814919 AGTCTTCATCGTCGAGTGTCTT 59.185 45.455 0.00 0.00 0.00 3.01
5803 6701 2.417239 GAGTCTTCATCGTCGAGTGTCT 59.583 50.000 0.00 0.00 0.00 3.41
5804 6702 2.159824 TGAGTCTTCATCGTCGAGTGTC 59.840 50.000 0.00 0.00 0.00 3.67
5805 6703 2.095668 GTGAGTCTTCATCGTCGAGTGT 60.096 50.000 0.00 0.00 35.39 3.55
5806 6704 2.160615 AGTGAGTCTTCATCGTCGAGTG 59.839 50.000 0.00 0.00 35.39 3.51
5807 6705 2.417239 GAGTGAGTCTTCATCGTCGAGT 59.583 50.000 0.00 0.00 35.39 4.18
5808 6706 2.535931 CGAGTGAGTCTTCATCGTCGAG 60.536 54.545 0.00 0.00 36.66 4.04
5809 6707 1.393883 CGAGTGAGTCTTCATCGTCGA 59.606 52.381 0.00 0.00 36.66 4.20
5810 6708 1.393883 TCGAGTGAGTCTTCATCGTCG 59.606 52.381 0.00 0.00 36.56 5.12
5811 6709 2.476519 GGTCGAGTGAGTCTTCATCGTC 60.477 54.545 0.00 0.00 36.56 4.20
5812 6710 1.469308 GGTCGAGTGAGTCTTCATCGT 59.531 52.381 0.00 0.00 36.56 3.73
5813 6711 1.468914 TGGTCGAGTGAGTCTTCATCG 59.531 52.381 0.00 0.00 36.53 3.84
5814 6712 2.416162 GGTGGTCGAGTGAGTCTTCATC 60.416 54.545 0.00 0.00 35.39 2.92
5815 6713 1.546476 GGTGGTCGAGTGAGTCTTCAT 59.454 52.381 0.00 0.00 35.39 2.57
5816 6714 0.959553 GGTGGTCGAGTGAGTCTTCA 59.040 55.000 0.00 0.00 0.00 3.02
5817 6715 0.959553 TGGTGGTCGAGTGAGTCTTC 59.040 55.000 0.00 0.00 0.00 2.87
5818 6716 1.341531 CTTGGTGGTCGAGTGAGTCTT 59.658 52.381 0.00 0.00 0.00 3.01
5819 6717 0.962489 CTTGGTGGTCGAGTGAGTCT 59.038 55.000 0.00 0.00 0.00 3.24
5820 6718 0.959553 TCTTGGTGGTCGAGTGAGTC 59.040 55.000 0.00 0.00 0.00 3.36
5821 6719 0.962489 CTCTTGGTGGTCGAGTGAGT 59.038 55.000 0.00 0.00 0.00 3.41
5822 6720 1.068194 GTCTCTTGGTGGTCGAGTGAG 60.068 57.143 0.00 0.00 31.99 3.51
5823 6721 0.959553 GTCTCTTGGTGGTCGAGTGA 59.040 55.000 0.00 0.00 0.00 3.41
5824 6722 0.038159 GGTCTCTTGGTGGTCGAGTG 60.038 60.000 0.00 0.00 0.00 3.51
5825 6723 0.469331 TGGTCTCTTGGTGGTCGAGT 60.469 55.000 0.00 0.00 0.00 4.18
5826 6724 0.679505 TTGGTCTCTTGGTGGTCGAG 59.320 55.000 0.00 0.00 0.00 4.04
5827 6725 0.679505 CTTGGTCTCTTGGTGGTCGA 59.320 55.000 0.00 0.00 0.00 4.20
5828 6726 0.679505 TCTTGGTCTCTTGGTGGTCG 59.320 55.000 0.00 0.00 0.00 4.79
5829 6727 1.609320 GCTCTTGGTCTCTTGGTGGTC 60.609 57.143 0.00 0.00 0.00 4.02
5830 6728 0.398318 GCTCTTGGTCTCTTGGTGGT 59.602 55.000 0.00 0.00 0.00 4.16
5831 6729 0.322008 GGCTCTTGGTCTCTTGGTGG 60.322 60.000 0.00 0.00 0.00 4.61
5832 6730 0.397941 TGGCTCTTGGTCTCTTGGTG 59.602 55.000 0.00 0.00 0.00 4.17
5833 6731 0.398318 GTGGCTCTTGGTCTCTTGGT 59.602 55.000 0.00 0.00 0.00 3.67
5834 6732 0.689623 AGTGGCTCTTGGTCTCTTGG 59.310 55.000 0.00 0.00 0.00 3.61
5835 6733 1.622811 AGAGTGGCTCTTGGTCTCTTG 59.377 52.381 0.00 0.00 37.60 3.02
5836 6734 1.622811 CAGAGTGGCTCTTGGTCTCTT 59.377 52.381 0.00 0.00 38.99 2.85
5837 6735 1.265236 CAGAGTGGCTCTTGGTCTCT 58.735 55.000 0.00 0.00 38.99 3.10
5838 6736 0.390998 GCAGAGTGGCTCTTGGTCTC 60.391 60.000 0.00 0.00 38.99 3.36
5839 6737 1.123861 TGCAGAGTGGCTCTTGGTCT 61.124 55.000 0.00 0.00 38.99 3.85
5840 6738 0.035630 ATGCAGAGTGGCTCTTGGTC 60.036 55.000 0.00 0.00 38.99 4.02
5841 6739 0.035630 GATGCAGAGTGGCTCTTGGT 60.036 55.000 0.00 0.00 38.99 3.67
5842 6740 0.747283 GGATGCAGAGTGGCTCTTGG 60.747 60.000 0.00 0.00 38.99 3.61
5843 6741 0.035725 TGGATGCAGAGTGGCTCTTG 60.036 55.000 0.00 0.00 38.99 3.02
5844 6742 0.694771 TTGGATGCAGAGTGGCTCTT 59.305 50.000 0.00 0.00 38.99 2.85
5845 6743 0.694771 TTTGGATGCAGAGTGGCTCT 59.305 50.000 0.00 0.00 42.11 4.09
5846 6744 0.807496 GTTTGGATGCAGAGTGGCTC 59.193 55.000 0.00 0.00 34.04 4.70
5847 6745 0.957395 CGTTTGGATGCAGAGTGGCT 60.957 55.000 0.00 0.00 34.04 4.75
5848 6746 1.503542 CGTTTGGATGCAGAGTGGC 59.496 57.895 0.00 0.00 0.00 5.01
5849 6747 0.606401 ACCGTTTGGATGCAGAGTGG 60.606 55.000 0.00 0.00 39.21 4.00
5850 6748 0.798776 GACCGTTTGGATGCAGAGTG 59.201 55.000 0.00 0.00 39.21 3.51
5851 6749 0.687354 AGACCGTTTGGATGCAGAGT 59.313 50.000 0.00 0.00 39.21 3.24
5852 6750 1.081892 CAGACCGTTTGGATGCAGAG 58.918 55.000 0.00 0.00 39.21 3.35
5853 6751 0.396435 ACAGACCGTTTGGATGCAGA 59.604 50.000 0.00 0.00 39.21 4.26
5854 6752 2.093306 TACAGACCGTTTGGATGCAG 57.907 50.000 0.00 0.00 39.21 4.41
5855 6753 2.552599 TTACAGACCGTTTGGATGCA 57.447 45.000 0.00 0.00 39.21 3.96
5856 6754 5.123344 ACTTAATTACAGACCGTTTGGATGC 59.877 40.000 0.00 0.00 39.21 3.91
5857 6755 6.737254 ACTTAATTACAGACCGTTTGGATG 57.263 37.500 0.00 0.00 39.21 3.51
5858 6756 7.618137 ACTACTTAATTACAGACCGTTTGGAT 58.382 34.615 0.00 0.00 39.21 3.41
5859 6757 6.996509 ACTACTTAATTACAGACCGTTTGGA 58.003 36.000 0.00 0.00 39.21 3.53
5860 6758 7.095270 AGACTACTTAATTACAGACCGTTTGG 58.905 38.462 0.00 0.00 42.84 3.28
5861 6759 8.530269 AAGACTACTTAATTACAGACCGTTTG 57.470 34.615 0.00 0.00 34.28 2.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.