Multiple sequence alignment - TraesCS6B01G451200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G451200 chr6B 100.000 6319 0 0 1 6319 710095880 710102198 0.000000e+00 11670.0
1 TraesCS6B01G451200 chr6A 92.371 2176 87 31 160 2266 611850696 611852861 0.000000e+00 3025.0
2 TraesCS6B01G451200 chr6A 85.981 1448 107 43 4389 5770 611855005 611856422 0.000000e+00 1461.0
3 TraesCS6B01G451200 chr6A 90.605 1107 56 21 2888 3988 611853508 611854572 0.000000e+00 1424.0
4 TraesCS6B01G451200 chr6A 91.694 602 40 3 2290 2887 611852854 611853449 0.000000e+00 826.0
5 TraesCS6B01G451200 chr6A 88.235 442 24 20 5879 6319 611857081 611857495 2.630000e-138 503.0
6 TraesCS6B01G451200 chr6A 90.314 382 26 7 3983 4361 611854635 611855008 2.050000e-134 490.0
7 TraesCS6B01G451200 chr6D 92.220 1658 91 18 629 2266 465202796 465204435 0.000000e+00 2313.0
8 TraesCS6B01G451200 chr6D 92.627 868 49 11 3130 3988 465205330 465206191 0.000000e+00 1234.0
9 TraesCS6B01G451200 chr6D 89.593 836 40 14 4966 5770 465207277 465208096 0.000000e+00 1018.0
10 TraesCS6B01G451200 chr6D 89.037 602 37 6 2290 2887 465204428 465205004 0.000000e+00 719.0
11 TraesCS6B01G451200 chr6D 91.361 382 26 5 3983 4361 465206254 465206631 3.380000e-142 516.0
12 TraesCS6B01G451200 chr6D 86.260 393 32 11 5927 6319 465208828 465209198 2.120000e-109 407.0
13 TraesCS6B01G451200 chr6D 78.998 619 70 18 4389 4956 465206628 465207237 1.000000e-97 368.0
14 TraesCS6B01G451200 chr6D 92.075 265 13 6 2888 3151 465205061 465205318 3.600000e-97 366.0
15 TraesCS6B01G451200 chr6D 75.852 352 33 25 92 411 465202119 465202450 1.430000e-26 132.0
16 TraesCS6B01G451200 chr1A 83.486 218 34 1 3442 3659 556588654 556588439 1.070000e-47 202.0
17 TraesCS6B01G451200 chr2B 86.550 171 23 0 2952 3122 697709314 697709144 8.360000e-44 189.0
18 TraesCS6B01G451200 chr2D 85.965 171 24 0 2952 3122 579758953 579758783 3.890000e-42 183.0
19 TraesCS6B01G451200 chr2D 77.901 181 30 7 4772 4944 622842634 622842456 3.120000e-18 104.0
20 TraesCS6B01G451200 chr2A 85.965 171 24 0 2952 3122 717386746 717386576 3.890000e-42 183.0
21 TraesCS6B01G451200 chr7B 79.006 181 28 7 4772 4944 743411276 743411454 1.440000e-21 115.0
22 TraesCS6B01G451200 chr7D 84.091 88 14 0 4857 4944 631849514 631849601 1.130000e-12 86.1
23 TraesCS6B01G451200 chr7A 85.366 82 12 0 4863 4944 736523703 736523622 1.130000e-12 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G451200 chr6B 710095880 710102198 6318 False 11670.000000 11670 100.000000 1 6319 1 chr6B.!!$F1 6318
1 TraesCS6B01G451200 chr6A 611850696 611857495 6799 False 1288.166667 3025 89.866667 160 6319 6 chr6A.!!$F1 6159
2 TraesCS6B01G451200 chr6D 465202119 465209198 7079 False 785.888889 2313 87.558111 92 6319 9 chr6D.!!$F1 6227

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
696 912 0.035534 CCCGATGATGTGGTTGACCA 60.036 55.0 0.00 0.0 45.30 4.02 F
1320 1565 0.035458 AAGGAAAGACTCTGTGGCCG 59.965 55.0 0.00 0.0 0.00 6.13 F
2465 2731 0.531200 GCTAGCTGGTGGTCGTTACT 59.469 55.0 7.70 0.0 0.00 2.24 F
2794 3064 0.251787 GCCCCATGGTCTTCAGGTTT 60.252 55.0 11.73 0.0 0.00 3.27 F
4369 4809 0.461961 GCTTCAGAGTATCCACGGCT 59.538 55.0 0.00 0.0 33.66 5.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2428 2694 1.071385 AGCACAGCTAAGTCTTGCACT 59.929 47.619 0.00 0.0 36.99 4.40 R
2474 2740 1.168714 GCAAAGCTGTTGGACTAGGG 58.831 55.000 9.63 0.0 0.00 3.53 R
4391 4831 0.473694 TGACACCCACCCACAGATCT 60.474 55.000 0.00 0.0 0.00 2.75 R
4392 4832 0.620556 ATGACACCCACCCACAGATC 59.379 55.000 0.00 0.0 0.00 2.75 R
5576 6129 0.179161 CCTGATCTCGACGGACACAC 60.179 60.000 0.00 0.0 0.00 3.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.627585 GTTCCTTGTTTTAATTAACCGTTCC 57.372 36.000 0.00 0.00 0.00 3.62
25 26 7.428020 GTTCCTTGTTTTAATTAACCGTTCCT 58.572 34.615 0.00 0.00 0.00 3.36
26 27 7.585579 TCCTTGTTTTAATTAACCGTTCCTT 57.414 32.000 0.00 0.00 0.00 3.36
27 28 7.427214 TCCTTGTTTTAATTAACCGTTCCTTG 58.573 34.615 0.00 0.00 0.00 3.61
28 29 7.068470 TCCTTGTTTTAATTAACCGTTCCTTGT 59.932 33.333 0.00 0.00 0.00 3.16
29 30 7.707464 CCTTGTTTTAATTAACCGTTCCTTGTT 59.293 33.333 0.00 0.00 0.00 2.83
30 31 8.999220 TTGTTTTAATTAACCGTTCCTTGTTT 57.001 26.923 0.00 0.00 0.00 2.83
31 32 8.631676 TGTTTTAATTAACCGTTCCTTGTTTC 57.368 30.769 0.00 0.00 0.00 2.78
32 33 8.468399 TGTTTTAATTAACCGTTCCTTGTTTCT 58.532 29.630 0.00 0.00 0.00 2.52
33 34 8.748582 GTTTTAATTAACCGTTCCTTGTTTCTG 58.251 33.333 0.00 0.00 0.00 3.02
34 35 3.974871 TTAACCGTTCCTTGTTTCTGC 57.025 42.857 0.00 0.00 0.00 4.26
35 36 1.029681 AACCGTTCCTTGTTTCTGCC 58.970 50.000 0.00 0.00 0.00 4.85
36 37 0.822121 ACCGTTCCTTGTTTCTGCCC 60.822 55.000 0.00 0.00 0.00 5.36
37 38 1.524008 CCGTTCCTTGTTTCTGCCCC 61.524 60.000 0.00 0.00 0.00 5.80
38 39 1.524008 CGTTCCTTGTTTCTGCCCCC 61.524 60.000 0.00 0.00 0.00 5.40
56 57 2.438795 CACCGGGGTGGGATTTGT 59.561 61.111 6.32 0.00 44.64 2.83
57 58 1.228737 CACCGGGGTGGGATTTGTT 60.229 57.895 6.32 0.00 44.64 2.83
58 59 1.076014 ACCGGGGTGGGATTTGTTC 59.924 57.895 6.32 0.00 44.64 3.18
59 60 2.043980 CCGGGGTGGGATTTGTTCG 61.044 63.158 0.00 0.00 0.00 3.95
60 61 1.302993 CGGGGTGGGATTTGTTCGT 60.303 57.895 0.00 0.00 0.00 3.85
61 62 1.582610 CGGGGTGGGATTTGTTCGTG 61.583 60.000 0.00 0.00 0.00 4.35
62 63 1.248101 GGGGTGGGATTTGTTCGTGG 61.248 60.000 0.00 0.00 0.00 4.94
63 64 0.250989 GGGTGGGATTTGTTCGTGGA 60.251 55.000 0.00 0.00 0.00 4.02
64 65 1.615919 GGGTGGGATTTGTTCGTGGAT 60.616 52.381 0.00 0.00 0.00 3.41
65 66 1.472480 GGTGGGATTTGTTCGTGGATG 59.528 52.381 0.00 0.00 0.00 3.51
66 67 2.432444 GTGGGATTTGTTCGTGGATGA 58.568 47.619 0.00 0.00 0.00 2.92
67 68 2.161609 GTGGGATTTGTTCGTGGATGAC 59.838 50.000 0.00 0.00 0.00 3.06
68 69 1.743394 GGGATTTGTTCGTGGATGACC 59.257 52.381 0.00 0.00 0.00 4.02
69 70 2.432444 GGATTTGTTCGTGGATGACCA 58.568 47.619 0.00 0.00 44.76 4.02
79 80 2.851263 TGGATGACCACCAGTAACAC 57.149 50.000 0.00 0.00 41.77 3.32
80 81 1.001520 TGGATGACCACCAGTAACACG 59.998 52.381 0.00 0.00 41.77 4.49
81 82 1.076332 GATGACCACCAGTAACACGC 58.924 55.000 0.00 0.00 0.00 5.34
82 83 0.669318 ATGACCACCAGTAACACGCG 60.669 55.000 3.53 3.53 0.00 6.01
83 84 2.663852 ACCACCAGTAACACGCGC 60.664 61.111 5.73 0.00 0.00 6.86
84 85 3.773630 CCACCAGTAACACGCGCG 61.774 66.667 30.96 30.96 0.00 6.86
85 86 3.773630 CACCAGTAACACGCGCGG 61.774 66.667 35.22 24.36 0.00 6.46
86 87 3.980989 ACCAGTAACACGCGCGGA 61.981 61.111 35.22 13.50 0.00 5.54
87 88 2.508439 CCAGTAACACGCGCGGAT 60.508 61.111 35.22 21.21 0.00 4.18
88 89 1.226745 CCAGTAACACGCGCGGATA 60.227 57.895 35.22 20.11 0.00 2.59
89 90 0.596600 CCAGTAACACGCGCGGATAT 60.597 55.000 35.22 18.95 0.00 1.63
90 91 0.502695 CAGTAACACGCGCGGATATG 59.497 55.000 35.22 24.72 0.00 1.78
96 97 0.371989 CACGCGCGGATATGAACAAA 59.628 50.000 35.22 0.00 0.00 2.83
100 101 3.496884 ACGCGCGGATATGAACAAATATT 59.503 39.130 35.22 2.79 0.00 1.28
117 118 3.948719 TGGTTGGTCCAGTCCGGC 61.949 66.667 0.00 0.00 41.93 6.13
140 156 1.573108 ACAAGATCGTCCTCCACCAT 58.427 50.000 0.00 0.00 0.00 3.55
141 157 1.482593 ACAAGATCGTCCTCCACCATC 59.517 52.381 0.00 0.00 0.00 3.51
142 158 1.482182 CAAGATCGTCCTCCACCATCA 59.518 52.381 0.00 0.00 0.00 3.07
143 159 1.115467 AGATCGTCCTCCACCATCAC 58.885 55.000 0.00 0.00 0.00 3.06
158 174 1.931841 CATCACTTCGCTCCATGTCTG 59.068 52.381 0.00 0.00 0.00 3.51
182 199 0.973632 GTCCATGGGGGTTTGTTTCC 59.026 55.000 13.02 0.00 38.11 3.13
225 242 7.200455 ACACTTTAATGTTTTAACTCAGGCAC 58.800 34.615 0.00 0.00 0.00 5.01
246 269 3.953612 ACAACCGTATGCATGATCCAATT 59.046 39.130 10.16 0.00 0.00 2.32
272 295 3.889692 CTGTGTGGGTGGGTGGCT 61.890 66.667 0.00 0.00 0.00 4.75
273 296 4.202574 TGTGTGGGTGGGTGGCTG 62.203 66.667 0.00 0.00 0.00 4.85
274 297 4.974721 GTGTGGGTGGGTGGCTGG 62.975 72.222 0.00 0.00 0.00 4.85
297 320 2.045280 CCCTACGCTCCTCCATCAG 58.955 63.158 0.00 0.00 0.00 2.90
314 341 1.079503 CAGTTCGCCCTGTTTCTAGC 58.920 55.000 0.00 0.00 0.00 3.42
362 407 5.869753 AAGCACTGATACACTTTGATGTC 57.130 39.130 0.00 0.00 33.85 3.06
368 413 4.588899 TGATACACTTTGATGTCTTGGGG 58.411 43.478 0.00 0.00 33.85 4.96
369 414 4.288366 TGATACACTTTGATGTCTTGGGGA 59.712 41.667 0.00 0.00 33.85 4.81
391 437 7.388776 GGGGACTTTTTGGTACGGATATAATAC 59.611 40.741 0.00 0.00 0.00 1.89
443 509 2.420687 GGACCTGTGATCCTCCATTCAC 60.421 54.545 0.00 0.00 42.05 3.18
449 515 4.326826 TGTGATCCTCCATTCACTTCAAC 58.673 43.478 4.86 0.00 42.17 3.18
478 544 7.149307 CCTCTGCTTTCTTTATACCTAGCTAC 58.851 42.308 0.00 0.00 0.00 3.58
497 563 1.003866 ACTTGTTTTCGTCTTCTGCGC 60.004 47.619 0.00 0.00 0.00 6.09
525 591 8.996651 ATTTATTTATCCGTCCTCTGGATTTT 57.003 30.769 0.00 0.00 43.76 1.82
537 603 7.518188 GTCCTCTGGATTTTATTCATTCCCTA 58.482 38.462 0.00 0.00 32.73 3.53
539 605 7.572485 TCCTCTGGATTTTATTCATTCCCTAGA 59.428 37.037 0.00 0.00 0.00 2.43
544 610 9.793259 TGGATTTTATTCATTCCCTAGATACAC 57.207 33.333 0.00 0.00 0.00 2.90
574 640 2.537625 CGGCTTCTTAGCTTGATCTTCG 59.462 50.000 0.00 0.00 46.90 3.79
671 887 2.494870 GCTGGATTGCTCTTGGTTTGAT 59.505 45.455 0.00 0.00 0.00 2.57
683 899 0.100503 GGTTTGATTTCCGCCCGATG 59.899 55.000 0.00 0.00 0.00 3.84
696 912 0.035534 CCCGATGATGTGGTTGACCA 60.036 55.000 0.00 0.00 45.30 4.02
710 926 4.282195 TGGTTGACCAAATTGGGTATGTTC 59.718 41.667 17.27 4.11 44.35 3.18
727 943 2.642311 TGTTCCAGTTAGGCATTCAGGA 59.358 45.455 0.00 0.00 37.29 3.86
746 964 1.663643 GAGACAGTGCGTGTGTTTCAA 59.336 47.619 0.00 0.00 40.56 2.69
771 989 0.664761 AGACATGTGTGTTGTGCTGC 59.335 50.000 1.15 0.00 39.09 5.25
830 1053 2.034879 CCGTTGCAGCCTCGATGTT 61.035 57.895 7.72 0.00 0.00 2.71
845 1069 4.693283 TCGATGTTCACTCAAGTTTCACT 58.307 39.130 0.00 0.00 0.00 3.41
846 1070 5.838529 TCGATGTTCACTCAAGTTTCACTA 58.161 37.500 0.00 0.00 0.00 2.74
848 1072 6.366061 TCGATGTTCACTCAAGTTTCACTATG 59.634 38.462 0.00 0.00 0.00 2.23
849 1073 6.366061 CGATGTTCACTCAAGTTTCACTATGA 59.634 38.462 0.00 0.00 0.00 2.15
850 1074 6.844696 TGTTCACTCAAGTTTCACTATGAC 57.155 37.500 0.00 0.00 0.00 3.06
851 1075 6.582636 TGTTCACTCAAGTTTCACTATGACT 58.417 36.000 0.00 0.00 0.00 3.41
852 1076 7.722363 TGTTCACTCAAGTTTCACTATGACTA 58.278 34.615 0.00 0.00 0.00 2.59
968 1212 4.846779 AGTCTGAATCTATCTTCTCCGC 57.153 45.455 0.00 0.00 0.00 5.54
971 1215 5.362430 AGTCTGAATCTATCTTCTCCGCTTT 59.638 40.000 0.00 0.00 0.00 3.51
974 1218 4.572389 TGAATCTATCTTCTCCGCTTTTGC 59.428 41.667 0.00 0.00 43.23 3.68
1050 1295 0.790993 TACAGGGGGTCTCCAGTTCT 59.209 55.000 0.00 0.00 37.22 3.01
1143 1388 2.048603 GGACCCACATGCTTCAGGC 61.049 63.158 0.00 0.00 42.22 4.85
1153 1398 2.195567 GCTTCAGGCACAAGCACCA 61.196 57.895 13.77 0.00 44.87 4.17
1210 1455 1.206371 ACACCTACTCCGGTACATTGC 59.794 52.381 0.00 0.00 34.94 3.56
1311 1556 0.613012 GGCATGGGCAAGGAAAGACT 60.613 55.000 0.00 0.00 43.71 3.24
1320 1565 0.035458 AAGGAAAGACTCTGTGGCCG 59.965 55.000 0.00 0.00 0.00 6.13
1377 1622 4.202419 GGGTACATATATGGTGAAGGCACA 60.202 45.833 16.96 0.00 46.96 4.57
1425 1670 1.201429 AGGGACGGTGGAAGCTGAAT 61.201 55.000 0.00 0.00 0.00 2.57
1503 1748 5.994250 TCTTGGATTCAGGGAGAAATACAG 58.006 41.667 0.00 0.00 40.22 2.74
1518 1763 5.189145 AGAAATACAGGGTCACGGAAAGTAT 59.811 40.000 0.00 0.00 0.00 2.12
1526 1771 3.463944 GTCACGGAAAGTATACATGGGG 58.536 50.000 5.50 0.00 0.00 4.96
1572 1817 6.759827 GCAATATGAAAAATGGCAAGATGTCT 59.240 34.615 0.00 0.00 0.00 3.41
1578 1823 5.549742 AAAATGGCAAGATGTCTGGAAAA 57.450 34.783 0.00 0.00 0.00 2.29
1773 2018 6.226052 TGCTGGTGATGAGCTGTATATAAAG 58.774 40.000 0.00 0.00 37.35 1.85
1818 2063 1.208293 CCTGACCCTAGAAGGCAGAAC 59.792 57.143 15.18 0.00 34.74 3.01
2256 2501 3.559242 GCTGCTCCTCTCATTGAATGTAC 59.441 47.826 4.93 0.00 0.00 2.90
2257 2502 4.125703 CTGCTCCTCTCATTGAATGTACC 58.874 47.826 4.93 0.00 0.00 3.34
2258 2503 3.126831 GCTCCTCTCATTGAATGTACCG 58.873 50.000 4.93 0.00 0.00 4.02
2259 2504 3.430929 GCTCCTCTCATTGAATGTACCGT 60.431 47.826 4.93 0.00 0.00 4.83
2260 2505 4.759782 CTCCTCTCATTGAATGTACCGTT 58.240 43.478 4.93 0.00 0.00 4.44
2261 2506 5.160607 TCCTCTCATTGAATGTACCGTTT 57.839 39.130 4.93 0.00 0.00 3.60
2262 2507 4.935205 TCCTCTCATTGAATGTACCGTTTG 59.065 41.667 4.93 0.00 0.00 2.93
2263 2508 4.935205 CCTCTCATTGAATGTACCGTTTGA 59.065 41.667 4.93 0.00 0.00 2.69
2264 2509 5.411361 CCTCTCATTGAATGTACCGTTTGAA 59.589 40.000 4.93 0.00 0.00 2.69
2265 2510 6.402550 CCTCTCATTGAATGTACCGTTTGAAG 60.403 42.308 4.93 0.00 0.00 3.02
2266 2511 5.995282 TCTCATTGAATGTACCGTTTGAAGT 59.005 36.000 4.93 0.00 0.00 3.01
2267 2512 6.485313 TCTCATTGAATGTACCGTTTGAAGTT 59.515 34.615 4.93 0.00 0.00 2.66
2268 2513 7.012894 TCTCATTGAATGTACCGTTTGAAGTTT 59.987 33.333 4.93 0.00 0.00 2.66
2269 2514 7.484975 TCATTGAATGTACCGTTTGAAGTTTT 58.515 30.769 4.93 0.00 0.00 2.43
2270 2515 7.976734 TCATTGAATGTACCGTTTGAAGTTTTT 59.023 29.630 4.93 0.00 0.00 1.94
2296 2541 5.723672 TTTGCGGGTAATACCATTTGAAA 57.276 34.783 12.03 0.34 41.02 2.69
2297 2542 5.923733 TTGCGGGTAATACCATTTGAAAT 57.076 34.783 12.03 0.00 41.02 2.17
2320 2565 5.795766 TGTTGATAAATAGCTCGCTTTTCG 58.204 37.500 0.00 0.00 40.15 3.46
2322 2567 6.532302 TGTTGATAAATAGCTCGCTTTTCGTA 59.468 34.615 0.00 0.00 39.67 3.43
2328 2573 3.505464 AGCTCGCTTTTCGTATACTGT 57.495 42.857 0.56 0.00 39.67 3.55
2341 2586 6.387041 TCGTATACTGTCTGGTAAATGAGG 57.613 41.667 0.56 0.00 0.00 3.86
2392 2637 4.670227 AGTGCGATTCTAGCAAAAGTTC 57.330 40.909 0.00 0.00 46.97 3.01
2403 2648 6.427150 TCTAGCAAAAGTTCGACAACAAATC 58.573 36.000 0.00 0.00 34.60 2.17
2408 2674 7.867403 AGCAAAAGTTCGACAACAAATCATTAT 59.133 29.630 0.00 0.00 34.60 1.28
2409 2675 8.487176 GCAAAAGTTCGACAACAAATCATTATT 58.513 29.630 0.00 0.00 34.60 1.40
2412 2678 9.965824 AAAGTTCGACAACAAATCATTATTTCT 57.034 25.926 0.00 0.00 32.87 2.52
2413 2679 9.612620 AAGTTCGACAACAAATCATTATTTCTC 57.387 29.630 0.00 0.00 32.87 2.87
2414 2680 9.003658 AGTTCGACAACAAATCATTATTTCTCT 57.996 29.630 0.00 0.00 32.87 3.10
2415 2681 9.612620 GTTCGACAACAAATCATTATTTCTCTT 57.387 29.630 0.00 0.00 32.87 2.85
2416 2682 9.825972 TTCGACAACAAATCATTATTTCTCTTC 57.174 29.630 0.00 0.00 32.87 2.87
2417 2683 9.219603 TCGACAACAAATCATTATTTCTCTTCT 57.780 29.630 0.00 0.00 32.87 2.85
2418 2684 9.270576 CGACAACAAATCATTATTTCTCTTCTG 57.729 33.333 0.00 0.00 32.87 3.02
2440 2706 7.045416 TCTGAAAAGTAACAGTGCAAGACTTA 58.955 34.615 0.00 0.00 35.84 2.24
2460 2726 1.446792 CTGTGCTAGCTGGTGGTCG 60.447 63.158 17.23 0.00 0.00 4.79
2465 2731 0.531200 GCTAGCTGGTGGTCGTTACT 59.469 55.000 7.70 0.00 0.00 2.24
2469 2735 2.522185 AGCTGGTGGTCGTTACTAGAA 58.478 47.619 0.00 0.00 0.00 2.10
2470 2736 2.895404 AGCTGGTGGTCGTTACTAGAAA 59.105 45.455 0.00 0.00 0.00 2.52
2471 2737 3.322828 AGCTGGTGGTCGTTACTAGAAAA 59.677 43.478 0.00 0.00 0.00 2.29
2472 2738 4.060205 GCTGGTGGTCGTTACTAGAAAAA 58.940 43.478 0.00 0.00 0.00 1.94
2518 2784 2.095059 CAGCAGCGTTTATTGCCTCTTT 60.095 45.455 0.00 0.00 41.17 2.52
2526 2796 4.201950 CGTTTATTGCCTCTTTCTGATGGG 60.202 45.833 0.00 0.00 0.00 4.00
2581 2851 2.629137 TGTTGAAACATCTGGCAAGCAT 59.371 40.909 0.00 0.00 33.17 3.79
2590 2860 9.219603 GAAACATCTGGCAAGCATAAGTATATA 57.780 33.333 0.00 0.00 0.00 0.86
2617 2887 8.201554 TCTGTAATGTTGATTCTGCTATTGTC 57.798 34.615 0.00 0.00 0.00 3.18
2776 3046 8.011844 AGGATTTTAAATGGAAGGACTATTGC 57.988 34.615 0.00 0.00 30.31 3.56
2785 3055 0.846693 AGGACTATTGCCCCATGGTC 59.153 55.000 11.73 2.42 0.00 4.02
2794 3064 0.251787 GCCCCATGGTCTTCAGGTTT 60.252 55.000 11.73 0.00 0.00 3.27
2797 3067 2.597455 CCCATGGTCTTCAGGTTTGTT 58.403 47.619 11.73 0.00 0.00 2.83
2846 3116 3.515104 TGTATGTCTGAGTGAGGAATGCA 59.485 43.478 0.00 0.00 0.00 3.96
2981 3309 6.873076 ACTTGAGAGAGATGTTCAAGATTGAC 59.127 38.462 17.43 0.00 46.71 3.18
3062 3390 5.073144 TCCTGGAAAGAGTGGAAGTGTATTT 59.927 40.000 0.00 0.00 0.00 1.40
3146 3503 7.264294 ACCTTTTTCTATCTGGACTTCTCAT 57.736 36.000 0.00 0.00 0.00 2.90
3155 3512 8.260818 TCTATCTGGACTTCTCATAAGTTTTGG 58.739 37.037 0.00 0.00 0.00 3.28
3157 3514 7.311092 TCTGGACTTCTCATAAGTTTTGGTA 57.689 36.000 0.00 0.00 0.00 3.25
3395 3757 5.814188 TCATCAACTTATGCACACATCTCTC 59.186 40.000 0.00 0.00 37.74 3.20
3397 3759 5.173664 TCAACTTATGCACACATCTCTCTG 58.826 41.667 0.00 0.00 37.74 3.35
3435 3797 8.262227 TGTTCACGTTCCTATTTATGGAGTAAT 58.738 33.333 0.00 0.00 34.76 1.89
3624 3986 8.380742 TGGATCTGAACTACTCCTTTTATCTT 57.619 34.615 0.00 0.00 0.00 2.40
3666 4028 5.298347 GCTCTACTTAAGTGAGTGTGGTTT 58.702 41.667 23.86 0.00 0.00 3.27
3684 4046 5.909610 GTGGTTTCTCTGAAAATCGTCTTTG 59.090 40.000 0.00 0.00 0.00 2.77
3691 4053 6.146184 TCTCTGAAAATCGTCTTTGCTTACTG 59.854 38.462 0.00 0.00 0.00 2.74
3701 4063 5.460419 CGTCTTTGCTTACTGAGATATGGTC 59.540 44.000 0.00 0.00 0.00 4.02
3739 4101 6.158598 GCATTGTATTTGGTGATGTGTTTCT 58.841 36.000 0.00 0.00 0.00 2.52
3740 4102 6.646240 GCATTGTATTTGGTGATGTGTTTCTT 59.354 34.615 0.00 0.00 0.00 2.52
3744 4107 6.983307 TGTATTTGGTGATGTGTTTCTTTTGG 59.017 34.615 0.00 0.00 0.00 3.28
3765 4128 6.116711 TGGGTTGTTGTTCAGCTAGTATAA 57.883 37.500 0.00 0.00 0.00 0.98
3766 4129 6.717289 TGGGTTGTTGTTCAGCTAGTATAAT 58.283 36.000 0.00 0.00 0.00 1.28
3768 4131 7.767198 TGGGTTGTTGTTCAGCTAGTATAATAC 59.233 37.037 0.00 0.00 0.00 1.89
3769 4132 7.985752 GGGTTGTTGTTCAGCTAGTATAATACT 59.014 37.037 0.00 0.00 42.68 2.12
3843 4209 7.010923 CACCTTGTTAGCAAAGATAGAGATGAC 59.989 40.741 0.00 0.00 33.73 3.06
3846 4212 8.846943 TTGTTAGCAAAGATAGAGATGACAAA 57.153 30.769 0.00 0.00 0.00 2.83
3847 4213 9.453572 TTGTTAGCAAAGATAGAGATGACAAAT 57.546 29.630 0.00 0.00 0.00 2.32
3879 4245 7.678947 AAGTATTGTGAAGAGATTTCTGGTG 57.321 36.000 0.00 0.00 32.79 4.17
3896 4262 7.517614 TTCTGGTGAAAATATGCAGTTAACA 57.482 32.000 8.61 0.00 0.00 2.41
3903 4269 7.698130 GTGAAAATATGCAGTTAACATCCAGTC 59.302 37.037 8.61 0.00 0.00 3.51
3907 4273 1.740025 GCAGTTAACATCCAGTCCAGC 59.260 52.381 8.61 0.00 0.00 4.85
3917 4283 1.643292 CAGTCCAGCGTGTGTTGTG 59.357 57.895 0.00 0.00 0.00 3.33
3918 4284 2.180204 AGTCCAGCGTGTGTTGTGC 61.180 57.895 0.00 0.00 0.00 4.57
3934 4300 6.817641 TGTGTTGTGCTCATTTTTCAGATTTT 59.182 30.769 0.00 0.00 0.00 1.82
3943 4309 7.568861 GCTCATTTTTCAGATTTTTGTGCAGAG 60.569 37.037 0.00 0.00 0.00 3.35
4003 4439 8.554528 AGAAATATGCAGTATGATCAAGTTTCG 58.445 33.333 0.00 0.00 39.69 3.46
4011 4447 7.128331 CAGTATGATCAAGTTTCGCCTTATTG 58.872 38.462 0.00 0.00 39.69 1.90
4025 4461 4.142708 CGCCTTATTGTAGTGTTTCATGCA 60.143 41.667 0.00 0.00 0.00 3.96
4032 4468 3.812609 TGTAGTGTTTCATGCATTGTCGT 59.187 39.130 0.00 0.00 0.00 4.34
4033 4469 3.988379 AGTGTTTCATGCATTGTCGTT 57.012 38.095 0.00 0.00 0.00 3.85
4034 4470 3.888934 AGTGTTTCATGCATTGTCGTTC 58.111 40.909 0.00 0.00 0.00 3.95
4060 4499 6.773638 TCTTCTTTTCAGGCAGATAAAGACT 58.226 36.000 12.92 0.00 35.29 3.24
4132 4571 1.471676 GGTGTCCATTACAGAGCTCCG 60.472 57.143 10.93 1.77 39.29 4.63
4153 4592 4.329619 CACCTACGAACACGTGCA 57.670 55.556 17.22 0.00 40.51 4.57
4156 4595 0.731514 ACCTACGAACACGTGCATCG 60.732 55.000 30.88 30.88 46.00 3.84
4186 4625 4.440663 CGAACCATGACAGCAGAGAGATTA 60.441 45.833 0.00 0.00 0.00 1.75
4201 4640 7.386299 GCAGAGAGATTAACAGTTCTTTCAGAA 59.614 37.037 0.00 0.00 0.00 3.02
4237 4676 2.356330 CCTTTACCTGCCGGTTAATGGA 60.356 50.000 4.69 0.00 42.13 3.41
4240 4679 2.525105 ACCTGCCGGTTAATGGATTT 57.475 45.000 1.90 0.00 42.13 2.17
4291 4731 8.141268 GGATAAATGTTGTTTCTTCAGTTCCAA 58.859 33.333 0.00 0.00 0.00 3.53
4300 4740 6.772233 TGTTTCTTCAGTTCCAATGATCTTCA 59.228 34.615 0.00 0.00 0.00 3.02
4301 4741 7.285172 TGTTTCTTCAGTTCCAATGATCTTCAA 59.715 33.333 0.00 0.00 0.00 2.69
4302 4742 6.808008 TCTTCAGTTCCAATGATCTTCAAC 57.192 37.500 0.00 0.00 0.00 3.18
4305 4745 7.503566 TCTTCAGTTCCAATGATCTTCAACTTT 59.496 33.333 0.00 0.00 0.00 2.66
4332 4772 8.941977 CGGGTATAATAAACATTGCAGCTATTA 58.058 33.333 0.00 0.00 0.00 0.98
4344 4784 7.993183 ACATTGCAGCTATTAATAGTACCAACT 59.007 33.333 20.89 7.96 39.91 3.16
4346 4786 7.361457 TGCAGCTATTAATAGTACCAACTCT 57.639 36.000 20.89 6.73 37.15 3.24
4348 4788 7.710907 TGCAGCTATTAATAGTACCAACTCTTG 59.289 37.037 20.89 7.76 37.15 3.02
4354 4794 7.900782 TTAATAGTACCAACTCTTGTGCTTC 57.099 36.000 0.00 0.00 37.15 3.86
4361 4801 4.040952 ACCAACTCTTGTGCTTCAGAGTAT 59.959 41.667 11.23 2.47 40.31 2.12
4362 4802 4.629200 CCAACTCTTGTGCTTCAGAGTATC 59.371 45.833 11.23 0.00 40.31 2.24
4363 4803 4.464069 ACTCTTGTGCTTCAGAGTATCC 57.536 45.455 9.66 0.00 39.53 2.59
4364 4804 3.834813 ACTCTTGTGCTTCAGAGTATCCA 59.165 43.478 9.66 0.00 39.53 3.41
4367 4807 1.204704 TGTGCTTCAGAGTATCCACGG 59.795 52.381 0.00 0.00 33.66 4.94
4369 4809 0.461961 GCTTCAGAGTATCCACGGCT 59.538 55.000 0.00 0.00 33.66 5.52
4370 4810 1.681793 GCTTCAGAGTATCCACGGCTA 59.318 52.381 0.00 0.00 33.66 3.93
4371 4811 2.297597 GCTTCAGAGTATCCACGGCTAT 59.702 50.000 0.00 0.00 33.66 2.97
4372 4812 3.243907 GCTTCAGAGTATCCACGGCTATT 60.244 47.826 0.00 0.00 33.66 1.73
4373 4813 4.551388 CTTCAGAGTATCCACGGCTATTC 58.449 47.826 0.00 0.00 33.66 1.75
4374 4814 3.562182 TCAGAGTATCCACGGCTATTCA 58.438 45.455 0.00 0.00 33.66 2.57
4375 4815 3.318275 TCAGAGTATCCACGGCTATTCAC 59.682 47.826 0.00 0.00 33.66 3.18
4376 4816 3.068165 CAGAGTATCCACGGCTATTCACA 59.932 47.826 0.00 0.00 33.66 3.58
4377 4817 3.068307 AGAGTATCCACGGCTATTCACAC 59.932 47.826 0.00 0.00 33.66 3.82
4378 4818 3.031736 AGTATCCACGGCTATTCACACT 58.968 45.455 0.00 0.00 0.00 3.55
4379 4819 3.451178 AGTATCCACGGCTATTCACACTT 59.549 43.478 0.00 0.00 0.00 3.16
4380 4820 2.851263 TCCACGGCTATTCACACTTT 57.149 45.000 0.00 0.00 0.00 2.66
4381 4821 2.695359 TCCACGGCTATTCACACTTTC 58.305 47.619 0.00 0.00 0.00 2.62
4382 4822 2.037902 TCCACGGCTATTCACACTTTCA 59.962 45.455 0.00 0.00 0.00 2.69
4383 4823 2.159627 CCACGGCTATTCACACTTTCAC 59.840 50.000 0.00 0.00 0.00 3.18
4384 4824 2.805671 CACGGCTATTCACACTTTCACA 59.194 45.455 0.00 0.00 0.00 3.58
4385 4825 3.067106 ACGGCTATTCACACTTTCACAG 58.933 45.455 0.00 0.00 0.00 3.66
4386 4826 3.244078 ACGGCTATTCACACTTTCACAGA 60.244 43.478 0.00 0.00 0.00 3.41
4387 4827 3.123621 CGGCTATTCACACTTTCACAGAC 59.876 47.826 0.00 0.00 0.00 3.51
4388 4828 4.065088 GGCTATTCACACTTTCACAGACA 58.935 43.478 0.00 0.00 0.00 3.41
4389 4829 4.153117 GGCTATTCACACTTTCACAGACAG 59.847 45.833 0.00 0.00 0.00 3.51
4390 4830 4.752101 GCTATTCACACTTTCACAGACAGT 59.248 41.667 0.00 0.00 0.00 3.55
4391 4831 5.926542 GCTATTCACACTTTCACAGACAGTA 59.073 40.000 0.00 0.00 0.00 2.74
4392 4832 6.090088 GCTATTCACACTTTCACAGACAGTAG 59.910 42.308 0.00 0.00 0.00 2.57
4393 4833 5.592104 TTCACACTTTCACAGACAGTAGA 57.408 39.130 0.00 0.00 0.00 2.59
4394 4834 5.791336 TCACACTTTCACAGACAGTAGAT 57.209 39.130 0.00 0.00 0.00 1.98
4395 4835 5.773575 TCACACTTTCACAGACAGTAGATC 58.226 41.667 0.00 0.00 0.00 2.75
4396 4836 5.536538 TCACACTTTCACAGACAGTAGATCT 59.463 40.000 0.00 0.00 0.00 2.75
4424 4864 2.829720 GGGTGTCATAGTGTCACTACCA 59.170 50.000 19.10 12.27 36.79 3.25
4431 4871 6.183360 TGTCATAGTGTCACTACCAGATCATG 60.183 42.308 14.95 8.10 32.84 3.07
4443 4883 2.483538 CCAGATCATGGCATGTGTCGTA 60.484 50.000 25.62 7.06 43.83 3.43
4444 4884 3.396560 CAGATCATGGCATGTGTCGTAT 58.603 45.455 25.62 11.69 0.00 3.06
4446 4886 3.323115 AGATCATGGCATGTGTCGTATCT 59.677 43.478 25.62 20.67 0.00 1.98
4448 4888 3.977427 TCATGGCATGTGTCGTATCTAC 58.023 45.455 25.62 0.00 0.00 2.59
4450 4890 4.099419 TCATGGCATGTGTCGTATCTACTT 59.901 41.667 25.62 0.00 0.00 2.24
4451 4891 5.300792 TCATGGCATGTGTCGTATCTACTTA 59.699 40.000 25.62 0.00 0.00 2.24
4452 4892 4.928601 TGGCATGTGTCGTATCTACTTAC 58.071 43.478 0.00 0.00 0.00 2.34
4461 4901 3.623060 TCGTATCTACTTACCGTGTCACC 59.377 47.826 0.00 0.00 0.00 4.02
4473 4913 0.106149 GTGTCACCGGGTCTTTCAGT 59.894 55.000 6.32 0.00 0.00 3.41
4477 4917 0.974383 CACCGGGTCTTTCAGTAGGT 59.026 55.000 6.32 0.00 0.00 3.08
4478 4918 1.346722 CACCGGGTCTTTCAGTAGGTT 59.653 52.381 6.32 0.00 0.00 3.50
4487 4927 3.071023 TCTTTCAGTAGGTTGTCACTGGG 59.929 47.826 2.20 0.00 42.01 4.45
4498 4938 0.035056 GTCACTGGGGTTCTGGATGG 60.035 60.000 0.00 0.00 0.00 3.51
4502 4942 1.619363 TGGGGTTCTGGATGGGAGG 60.619 63.158 0.00 0.00 0.00 4.30
4507 4947 0.106967 GTTCTGGATGGGAGGGCTTC 60.107 60.000 0.00 0.00 0.00 3.86
4521 4984 2.375174 AGGGCTTCCATTGAACTGTACA 59.625 45.455 0.00 0.00 0.00 2.90
4525 4988 4.142600 GGCTTCCATTGAACTGTACACATC 60.143 45.833 0.00 0.00 0.00 3.06
4527 4990 5.391310 GCTTCCATTGAACTGTACACATCAG 60.391 44.000 0.00 0.00 38.68 2.90
4536 4999 9.725019 TTGAACTGTACACATCAGAAATAATCT 57.275 29.630 0.00 0.00 39.68 2.40
4554 5021 3.380479 TCTAACAGACCCGTGAACTTG 57.620 47.619 0.00 0.00 0.00 3.16
4561 5028 1.055551 ACCCGTGAACTTGGTACCCA 61.056 55.000 10.07 0.00 0.00 4.51
4562 5029 0.604511 CCCGTGAACTTGGTACCCAC 60.605 60.000 10.07 8.75 30.78 4.61
4567 5034 2.104281 GTGAACTTGGTACCCACTGTCT 59.896 50.000 10.07 0.00 30.78 3.41
4569 5036 2.097110 ACTTGGTACCCACTGTCTGA 57.903 50.000 10.07 0.00 30.78 3.27
4570 5037 2.621070 ACTTGGTACCCACTGTCTGAT 58.379 47.619 10.07 0.00 30.78 2.90
4580 5047 5.215069 ACCCACTGTCTGATGATAGATCTT 58.785 41.667 0.00 0.00 35.70 2.40
4583 5050 6.215121 CCACTGTCTGATGATAGATCTTGTC 58.785 44.000 0.00 0.32 35.70 3.18
4593 5060 4.576873 TGATAGATCTTGTCGAGTCAGGTC 59.423 45.833 0.00 0.00 0.00 3.85
4617 5095 2.292267 GTCAGTTGGGATACATGCTGG 58.708 52.381 0.00 0.00 34.91 4.85
4620 5098 2.138542 AGTTGGGATACATGCTGGGAT 58.861 47.619 0.00 0.00 39.74 3.85
4623 5101 0.610232 GGGATACATGCTGGGATGCC 60.610 60.000 0.00 0.00 39.74 4.40
4639 5117 5.574188 GGGATGCCCAAATTAGTCTGATAT 58.426 41.667 0.00 0.00 44.65 1.63
4640 5118 6.721318 GGGATGCCCAAATTAGTCTGATATA 58.279 40.000 0.00 0.00 44.65 0.86
4641 5119 6.825721 GGGATGCCCAAATTAGTCTGATATAG 59.174 42.308 0.00 0.00 44.65 1.31
4652 5130 9.771534 AATTAGTCTGATATAGTTGCTCCTTTC 57.228 33.333 0.00 0.00 0.00 2.62
4664 5142 2.507058 TGCTCCTTTCTGTGATATGCCT 59.493 45.455 0.00 0.00 0.00 4.75
4670 5148 4.096984 CCTTTCTGTGATATGCCTTGTTCC 59.903 45.833 0.00 0.00 0.00 3.62
4671 5149 3.281727 TCTGTGATATGCCTTGTTCCC 57.718 47.619 0.00 0.00 0.00 3.97
4675 5153 4.415596 TGTGATATGCCTTGTTCCCTTTT 58.584 39.130 0.00 0.00 0.00 2.27
4676 5154 4.462483 TGTGATATGCCTTGTTCCCTTTTC 59.538 41.667 0.00 0.00 0.00 2.29
4680 5158 4.607293 ATGCCTTGTTCCCTTTTCTTTC 57.393 40.909 0.00 0.00 0.00 2.62
4682 5160 3.384467 TGCCTTGTTCCCTTTTCTTTCTG 59.616 43.478 0.00 0.00 0.00 3.02
4684 5162 4.583073 GCCTTGTTCCCTTTTCTTTCTGTA 59.417 41.667 0.00 0.00 0.00 2.74
4686 5164 6.681777 CCTTGTTCCCTTTTCTTTCTGTATG 58.318 40.000 0.00 0.00 0.00 2.39
4691 5176 4.601857 TCCCTTTTCTTTCTGTATGGACCT 59.398 41.667 0.00 0.00 0.00 3.85
4710 5195 3.055530 ACCTCCTGCAGTTCTATGTTCAG 60.056 47.826 13.81 0.00 0.00 3.02
4719 5204 6.017934 TGCAGTTCTATGTTCAGTTCTTGTTC 60.018 38.462 0.00 0.00 0.00 3.18
4720 5205 6.203723 GCAGTTCTATGTTCAGTTCTTGTTCT 59.796 38.462 0.00 0.00 0.00 3.01
4721 5206 7.254932 GCAGTTCTATGTTCAGTTCTTGTTCTT 60.255 37.037 0.00 0.00 0.00 2.52
4722 5207 8.066595 CAGTTCTATGTTCAGTTCTTGTTCTTG 58.933 37.037 0.00 0.00 0.00 3.02
4723 5208 7.770897 AGTTCTATGTTCAGTTCTTGTTCTTGT 59.229 33.333 0.00 0.00 0.00 3.16
4724 5209 8.398665 GTTCTATGTTCAGTTCTTGTTCTTGTT 58.601 33.333 0.00 0.00 0.00 2.83
4736 5221 8.946085 GTTCTTGTTCTTGTTATGATATGACCA 58.054 33.333 0.00 0.00 0.00 4.02
4754 5239 9.872684 ATATGACCAGGAGAACATATTTTCATT 57.127 29.630 4.50 0.00 33.85 2.57
4882 5371 0.179045 CTCACATAAGGGGAAGCCGG 60.179 60.000 0.00 0.00 0.00 6.13
4906 5395 4.373116 TCGTCGGCTGCTGGGTTC 62.373 66.667 8.89 0.00 0.00 3.62
4915 5404 2.359975 GCTGGGTTCGGGGAAGTG 60.360 66.667 0.00 0.00 0.00 3.16
4930 5419 1.556911 GAAGTGGATCTCCTGCTTCCA 59.443 52.381 16.37 0.00 39.94 3.53
4956 5445 2.772739 CCAGGTGAGGCTCATTTCG 58.227 57.895 21.84 9.58 0.00 3.46
4967 5456 5.069648 TGAGGCTCATTTCGATCACTATTCT 59.930 40.000 14.43 0.00 0.00 2.40
4968 5457 5.295950 AGGCTCATTTCGATCACTATTCTG 58.704 41.667 0.00 0.00 0.00 3.02
4969 5458 5.053145 GGCTCATTTCGATCACTATTCTGT 58.947 41.667 0.00 0.00 0.00 3.41
4970 5459 6.040955 AGGCTCATTTCGATCACTATTCTGTA 59.959 38.462 0.00 0.00 0.00 2.74
4972 5461 7.306866 GGCTCATTTCGATCACTATTCTGTAAC 60.307 40.741 0.00 0.00 0.00 2.50
4975 5496 9.087424 TCATTTCGATCACTATTCTGTAACTTG 57.913 33.333 0.00 0.00 0.00 3.16
4986 5507 9.982651 ACTATTCTGTAACTTGTATATTCGCAT 57.017 29.630 0.00 0.00 0.00 4.73
4991 5512 7.065204 TCTGTAACTTGTATATTCGCATTGCAA 59.935 33.333 9.69 0.00 0.00 4.08
4996 5517 2.129823 ATATTCGCATTGCAAGCTGC 57.870 45.000 13.84 13.84 45.29 5.25
5019 5540 1.032014 TGCACAAAGTGGGAGCTTTC 58.968 50.000 0.00 0.00 36.64 2.62
5031 5552 3.423154 GCTTTCGGTGACTGGGCG 61.423 66.667 0.00 0.00 0.00 6.13
5338 5869 4.489771 CCTCGGCCCACCACCATC 62.490 72.222 0.00 0.00 34.57 3.51
5339 5870 4.489771 CTCGGCCCACCACCATCC 62.490 72.222 0.00 0.00 34.57 3.51
5342 5873 4.129148 GGCCCACCACCATCCCTC 62.129 72.222 0.00 0.00 35.26 4.30
5343 5874 3.338250 GCCCACCACCATCCCTCA 61.338 66.667 0.00 0.00 0.00 3.86
5344 5875 2.917897 GCCCACCACCATCCCTCAA 61.918 63.158 0.00 0.00 0.00 3.02
5360 5891 0.396435 TCAACCAGTGAACGCTCCAT 59.604 50.000 0.00 0.00 31.51 3.41
5361 5892 1.202758 TCAACCAGTGAACGCTCCATT 60.203 47.619 0.00 0.00 31.51 3.16
5362 5893 1.608590 CAACCAGTGAACGCTCCATTT 59.391 47.619 0.00 0.00 0.00 2.32
5407 5959 2.506438 GAACGAGGAACGAGGGCG 60.506 66.667 0.00 0.00 45.77 6.13
5436 5988 1.201429 GGTCTTCTGGAGGGCTGGAA 61.201 60.000 0.00 0.00 0.00 3.53
5437 5989 0.915364 GTCTTCTGGAGGGCTGGAAT 59.085 55.000 0.00 0.00 0.00 3.01
5438 5990 1.283321 GTCTTCTGGAGGGCTGGAATT 59.717 52.381 0.00 0.00 0.00 2.17
5439 5991 1.995542 TCTTCTGGAGGGCTGGAATTT 59.004 47.619 0.00 0.00 0.00 1.82
5546 6099 1.216710 GTCCCGCTGTGGAAGAGAG 59.783 63.158 9.25 0.00 42.00 3.20
5554 6107 0.967887 TGTGGAAGAGAGGAGGAGCG 60.968 60.000 0.00 0.00 0.00 5.03
5576 6129 1.071239 CCGACTTTCTGCGCGAATATG 60.071 52.381 12.10 10.31 0.00 1.78
5665 6218 7.539710 GGTCTACTTTTGTTGTTCGTTTCTTTT 59.460 33.333 0.00 0.00 0.00 2.27
5666 6219 8.363029 GTCTACTTTTGTTGTTCGTTTCTTTTG 58.637 33.333 0.00 0.00 0.00 2.44
5667 6220 5.911421 ACTTTTGTTGTTCGTTTCTTTTGC 58.089 33.333 0.00 0.00 0.00 3.68
5672 6227 3.223423 TGTTCGTTTCTTTTGCAAGCA 57.777 38.095 0.00 0.00 0.00 3.91
5673 6228 3.178267 TGTTCGTTTCTTTTGCAAGCAG 58.822 40.909 0.00 0.00 0.00 4.24
5770 6325 1.214589 GCTGCCACTGGAAATGCTG 59.785 57.895 0.00 0.00 0.00 4.41
5772 6327 0.242825 CTGCCACTGGAAATGCTGTG 59.757 55.000 0.00 5.21 0.00 3.66
5774 6329 1.808531 GCCACTGGAAATGCTGTGCA 61.809 55.000 0.00 0.00 44.86 4.57
5775 6330 0.038892 CCACTGGAAATGCTGTGCAC 60.039 55.000 10.75 10.75 43.04 4.57
5776 6331 0.669619 CACTGGAAATGCTGTGCACA 59.330 50.000 20.37 20.37 43.04 4.57
5777 6332 0.670162 ACTGGAAATGCTGTGCACAC 59.330 50.000 17.42 13.56 43.04 3.82
5778 6333 0.669619 CTGGAAATGCTGTGCACACA 59.330 50.000 17.42 18.79 43.04 3.72
5786 6341 2.203195 TGTGCACACAGGTGGCTC 60.203 61.111 17.42 6.27 45.38 4.70
5787 6342 2.980233 GTGCACACAGGTGGCTCC 60.980 66.667 13.17 0.00 45.38 4.70
5827 6382 3.915575 GCAAGAGGATGCACAGGG 58.084 61.111 0.00 0.00 45.70 4.45
5828 6383 1.001641 GCAAGAGGATGCACAGGGT 60.002 57.895 0.00 0.00 45.70 4.34
5829 6384 0.610232 GCAAGAGGATGCACAGGGTT 60.610 55.000 0.00 0.00 45.70 4.11
5830 6385 1.915141 CAAGAGGATGCACAGGGTTT 58.085 50.000 0.00 0.00 0.00 3.27
5831 6386 1.542915 CAAGAGGATGCACAGGGTTTG 59.457 52.381 0.00 0.00 0.00 2.93
5832 6387 0.610232 AGAGGATGCACAGGGTTTGC 60.610 55.000 0.00 0.00 40.63 3.68
5833 6388 1.598701 GAGGATGCACAGGGTTTGCC 61.599 60.000 0.00 0.00 39.39 4.52
5847 6402 1.104577 TTTGCCGGTTTGGACTCCAC 61.105 55.000 1.90 0.00 42.00 4.02
5857 6412 2.217038 GGACTCCACACTGCCTCCA 61.217 63.158 0.00 0.00 0.00 3.86
5865 6420 0.620030 ACACTGCCTCCATACATGCA 59.380 50.000 0.00 0.00 0.00 3.96
5868 6423 1.491754 ACTGCCTCCATACATGCATCA 59.508 47.619 0.00 0.00 32.53 3.07
5869 6424 2.152016 CTGCCTCCATACATGCATCAG 58.848 52.381 0.00 0.00 32.53 2.90
5870 6425 1.202842 TGCCTCCATACATGCATCAGG 60.203 52.381 0.00 0.00 0.00 3.86
5888 7066 2.997986 CAGGGCAAGATTTCATGCAAAC 59.002 45.455 9.66 0.53 41.83 2.93
5921 7099 0.253347 TCCCCTCTTCCATGGCTTCT 60.253 55.000 6.96 0.00 0.00 2.85
5925 7105 1.615116 CCTCTTCCATGGCTTCTTGCA 60.615 52.381 6.96 0.00 45.15 4.08
5934 7114 7.019656 TCCATGGCTTCTTGCAATCTATATA 57.980 36.000 6.96 0.00 45.15 0.86
5939 7119 8.557592 TGGCTTCTTGCAATCTATATATCAAG 57.442 34.615 0.00 0.00 45.15 3.02
5993 7211 5.880054 AAAACTGTTATCCAGGAACATCG 57.120 39.130 0.00 0.00 46.06 3.84
6006 7224 2.603560 GGAACATCGACAATCTTCCGTC 59.396 50.000 0.00 0.00 0.00 4.79
6024 7242 1.264020 GTCGCTGTGAATGCAGACAAA 59.736 47.619 0.00 0.00 38.70 2.83
6025 7243 1.264020 TCGCTGTGAATGCAGACAAAC 59.736 47.619 0.00 0.00 38.70 2.93
6026 7244 1.678360 GCTGTGAATGCAGACAAACG 58.322 50.000 0.00 0.00 38.70 3.60
6027 7245 1.664016 GCTGTGAATGCAGACAAACGG 60.664 52.381 0.00 0.00 38.70 4.44
6028 7246 1.872952 CTGTGAATGCAGACAAACGGA 59.127 47.619 0.00 0.00 38.70 4.69
6029 7247 1.601903 TGTGAATGCAGACAAACGGAC 59.398 47.619 0.00 0.00 0.00 4.79
6030 7248 0.865111 TGAATGCAGACAAACGGACG 59.135 50.000 0.00 0.00 0.00 4.79
6032 7250 1.126846 GAATGCAGACAAACGGACGAG 59.873 52.381 0.00 0.00 0.00 4.18
6034 7252 0.596600 TGCAGACAAACGGACGAGAC 60.597 55.000 0.00 0.00 0.00 3.36
6037 7255 1.001706 CAGACAAACGGACGAGACAGA 60.002 52.381 0.00 0.00 0.00 3.41
6038 7256 1.679680 AGACAAACGGACGAGACAGAA 59.320 47.619 0.00 0.00 0.00 3.02
6044 7262 0.318445 CGGACGAGACAGAAAACCGT 60.318 55.000 0.00 0.00 35.21 4.83
6045 7263 1.416373 GGACGAGACAGAAAACCGTC 58.584 55.000 0.00 0.00 45.98 4.79
6047 7265 2.545322 GGACGAGACAGAAAACCGTCTT 60.545 50.000 11.97 0.00 45.96 3.01
6049 7267 1.714460 CGAGACAGAAAACCGTCTTCG 59.286 52.381 0.00 0.00 42.48 3.79
6050 7268 2.603892 CGAGACAGAAAACCGTCTTCGA 60.604 50.000 0.00 0.00 42.48 3.71
6051 7269 2.981140 GAGACAGAAAACCGTCTTCGAG 59.019 50.000 0.00 0.00 42.48 4.04
6052 7270 2.361438 AGACAGAAAACCGTCTTCGAGT 59.639 45.455 0.00 0.00 39.45 4.18
6053 7271 3.567164 AGACAGAAAACCGTCTTCGAGTA 59.433 43.478 0.00 0.00 39.45 2.59
6055 7273 4.483311 ACAGAAAACCGTCTTCGAGTATC 58.517 43.478 0.00 0.00 39.71 2.24
6056 7274 4.022589 ACAGAAAACCGTCTTCGAGTATCA 60.023 41.667 0.00 0.00 39.71 2.15
6057 7275 4.921515 CAGAAAACCGTCTTCGAGTATCAA 59.078 41.667 0.00 0.00 39.71 2.57
6059 7277 4.778534 AAACCGTCTTCGAGTATCAAGA 57.221 40.909 0.00 0.00 39.71 3.02
6062 7280 3.757493 ACCGTCTTCGAGTATCAAGACTT 59.243 43.478 10.15 0.00 44.05 3.01
6063 7281 4.099120 CCGTCTTCGAGTATCAAGACTTG 58.901 47.826 9.03 9.03 44.05 3.16
6064 7282 4.099120 CGTCTTCGAGTATCAAGACTTGG 58.901 47.826 15.13 0.00 44.05 3.61
6065 7283 4.379603 CGTCTTCGAGTATCAAGACTTGGT 60.380 45.833 15.13 10.85 44.05 3.67
6066 7284 4.859798 GTCTTCGAGTATCAAGACTTGGTG 59.140 45.833 15.13 0.00 43.49 4.17
6067 7285 3.232213 TCGAGTATCAAGACTTGGTGC 57.768 47.619 15.13 11.74 32.42 5.01
6068 7286 2.826128 TCGAGTATCAAGACTTGGTGCT 59.174 45.455 17.77 17.77 39.53 4.40
6069 7287 4.014406 TCGAGTATCAAGACTTGGTGCTA 58.986 43.478 17.76 2.33 36.83 3.49
6070 7288 4.461431 TCGAGTATCAAGACTTGGTGCTAA 59.539 41.667 17.76 7.80 36.83 3.09
6071 7289 5.127194 TCGAGTATCAAGACTTGGTGCTAAT 59.873 40.000 17.76 4.80 36.83 1.73
6286 7504 9.549078 AGAGCTTATTTGCTTTTACTATACCTC 57.451 33.333 0.00 0.00 44.17 3.85
6312 7530 4.162320 ACCAAGTCAGGATCGTATGACATT 59.838 41.667 20.07 11.88 46.63 2.71
6313 7531 4.509230 CCAAGTCAGGATCGTATGACATTG 59.491 45.833 20.07 18.64 46.63 2.82
6314 7532 5.351458 CAAGTCAGGATCGTATGACATTGA 58.649 41.667 20.07 0.00 46.63 2.57
6315 7533 4.938080 AGTCAGGATCGTATGACATTGAC 58.062 43.478 20.07 12.98 46.63 3.18
6318 7536 5.580691 GTCAGGATCGTATGACATTGACAAA 59.419 40.000 15.55 0.00 44.21 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.428020 AGGAACGGTTAATTAAAACAAGGAAC 58.572 34.615 0.00 0.00 0.00 3.62
1 2 7.585579 AGGAACGGTTAATTAAAACAAGGAA 57.414 32.000 0.00 0.00 0.00 3.36
2 3 7.068470 ACAAGGAACGGTTAATTAAAACAAGGA 59.932 33.333 0.00 0.00 0.00 3.36
3 4 7.204604 ACAAGGAACGGTTAATTAAAACAAGG 58.795 34.615 0.00 0.00 0.00 3.61
4 5 8.637281 AACAAGGAACGGTTAATTAAAACAAG 57.363 30.769 0.00 0.00 0.00 3.16
5 6 8.999220 AAACAAGGAACGGTTAATTAAAACAA 57.001 26.923 0.00 0.00 31.16 2.83
6 7 8.468399 AGAAACAAGGAACGGTTAATTAAAACA 58.532 29.630 0.00 0.00 31.16 2.83
7 8 8.748582 CAGAAACAAGGAACGGTTAATTAAAAC 58.251 33.333 0.00 0.00 31.16 2.43
8 9 7.435784 GCAGAAACAAGGAACGGTTAATTAAAA 59.564 33.333 0.00 0.00 31.16 1.52
9 10 6.919115 GCAGAAACAAGGAACGGTTAATTAAA 59.081 34.615 0.00 0.00 31.16 1.52
10 11 6.440436 GCAGAAACAAGGAACGGTTAATTAA 58.560 36.000 0.00 0.00 31.16 1.40
11 12 5.048573 GGCAGAAACAAGGAACGGTTAATTA 60.049 40.000 0.00 0.00 31.16 1.40
12 13 4.261867 GGCAGAAACAAGGAACGGTTAATT 60.262 41.667 0.00 0.00 31.16 1.40
13 14 3.254903 GGCAGAAACAAGGAACGGTTAAT 59.745 43.478 0.00 0.00 31.16 1.40
14 15 2.619646 GGCAGAAACAAGGAACGGTTAA 59.380 45.455 0.00 0.00 31.16 2.01
15 16 2.223745 GGCAGAAACAAGGAACGGTTA 58.776 47.619 0.00 0.00 31.16 2.85
16 17 1.029681 GGCAGAAACAAGGAACGGTT 58.970 50.000 0.00 0.00 32.58 4.44
17 18 0.822121 GGGCAGAAACAAGGAACGGT 60.822 55.000 0.00 0.00 0.00 4.83
18 19 1.524008 GGGGCAGAAACAAGGAACGG 61.524 60.000 0.00 0.00 0.00 4.44
19 20 1.524008 GGGGGCAGAAACAAGGAACG 61.524 60.000 0.00 0.00 0.00 3.95
20 21 2.351777 GGGGGCAGAAACAAGGAAC 58.648 57.895 0.00 0.00 0.00 3.62
21 22 4.943373 GGGGGCAGAAACAAGGAA 57.057 55.556 0.00 0.00 0.00 3.36
39 40 1.228737 AACAAATCCCACCCCGGTG 60.229 57.895 6.91 6.91 45.02 4.94
40 41 1.076014 GAACAAATCCCACCCCGGT 59.924 57.895 0.00 0.00 0.00 5.28
41 42 2.043980 CGAACAAATCCCACCCCGG 61.044 63.158 0.00 0.00 0.00 5.73
42 43 1.302993 ACGAACAAATCCCACCCCG 60.303 57.895 0.00 0.00 0.00 5.73
43 44 1.248101 CCACGAACAAATCCCACCCC 61.248 60.000 0.00 0.00 0.00 4.95
44 45 0.250989 TCCACGAACAAATCCCACCC 60.251 55.000 0.00 0.00 0.00 4.61
45 46 1.472480 CATCCACGAACAAATCCCACC 59.528 52.381 0.00 0.00 0.00 4.61
46 47 2.161609 GTCATCCACGAACAAATCCCAC 59.838 50.000 0.00 0.00 0.00 4.61
47 48 2.432444 GTCATCCACGAACAAATCCCA 58.568 47.619 0.00 0.00 0.00 4.37
48 49 1.743394 GGTCATCCACGAACAAATCCC 59.257 52.381 0.00 0.00 0.00 3.85
49 50 2.432444 TGGTCATCCACGAACAAATCC 58.568 47.619 0.00 0.00 39.03 3.01
60 61 1.001520 CGTGTTACTGGTGGTCATCCA 59.998 52.381 0.00 0.00 42.05 3.41
61 62 1.722011 CGTGTTACTGGTGGTCATCC 58.278 55.000 0.00 0.00 0.00 3.51
62 63 1.076332 GCGTGTTACTGGTGGTCATC 58.924 55.000 0.00 0.00 0.00 2.92
63 64 0.669318 CGCGTGTTACTGGTGGTCAT 60.669 55.000 0.00 0.00 0.00 3.06
64 65 1.300311 CGCGTGTTACTGGTGGTCA 60.300 57.895 0.00 0.00 0.00 4.02
65 66 2.664436 GCGCGTGTTACTGGTGGTC 61.664 63.158 8.43 0.00 0.00 4.02
66 67 2.663852 GCGCGTGTTACTGGTGGT 60.664 61.111 8.43 0.00 0.00 4.16
67 68 3.773630 CGCGCGTGTTACTGGTGG 61.774 66.667 24.19 0.00 0.00 4.61
68 69 3.773630 CCGCGCGTGTTACTGGTG 61.774 66.667 29.95 4.86 0.00 4.17
69 70 1.936436 TATCCGCGCGTGTTACTGGT 61.936 55.000 29.95 10.17 0.00 4.00
70 71 0.596600 ATATCCGCGCGTGTTACTGG 60.597 55.000 29.95 10.76 0.00 4.00
71 72 0.502695 CATATCCGCGCGTGTTACTG 59.497 55.000 29.95 11.58 0.00 2.74
72 73 0.382873 TCATATCCGCGCGTGTTACT 59.617 50.000 29.95 8.55 0.00 2.24
73 74 1.071698 GTTCATATCCGCGCGTGTTAC 60.072 52.381 29.95 17.14 0.00 2.50
74 75 1.202203 GTTCATATCCGCGCGTGTTA 58.798 50.000 29.95 18.25 0.00 2.41
75 76 0.738063 TGTTCATATCCGCGCGTGTT 60.738 50.000 29.95 16.71 0.00 3.32
76 77 0.738063 TTGTTCATATCCGCGCGTGT 60.738 50.000 29.95 18.83 0.00 4.49
77 78 0.371989 TTTGTTCATATCCGCGCGTG 59.628 50.000 29.95 20.22 0.00 5.34
78 79 1.295792 ATTTGTTCATATCCGCGCGT 58.704 45.000 29.95 14.20 0.00 6.01
79 80 3.722555 ATATTTGTTCATATCCGCGCG 57.277 42.857 25.67 25.67 0.00 6.86
80 81 4.158384 CCAATATTTGTTCATATCCGCGC 58.842 43.478 0.00 0.00 0.00 6.86
81 82 5.356882 ACCAATATTTGTTCATATCCGCG 57.643 39.130 0.00 0.00 0.00 6.46
82 83 5.920273 CCAACCAATATTTGTTCATATCCGC 59.080 40.000 2.04 0.00 0.00 5.54
83 84 7.038154 ACCAACCAATATTTGTTCATATCCG 57.962 36.000 2.04 0.00 0.00 4.18
84 85 7.069331 TGGACCAACCAATATTTGTTCATATCC 59.931 37.037 2.04 7.53 46.75 2.59
85 86 8.006298 TGGACCAACCAATATTTGTTCATATC 57.994 34.615 2.04 0.00 46.75 1.63
86 87 7.969690 TGGACCAACCAATATTTGTTCATAT 57.030 32.000 2.04 0.00 46.75 1.78
117 118 2.287668 GGTGGAGGACGATCTTGTATCG 60.288 54.545 5.89 5.89 46.02 2.92
140 156 0.969149 ACAGACATGGAGCGAAGTGA 59.031 50.000 0.00 0.00 0.00 3.41
141 157 1.728971 GAACAGACATGGAGCGAAGTG 59.271 52.381 0.00 0.00 0.00 3.16
142 158 1.338200 GGAACAGACATGGAGCGAAGT 60.338 52.381 0.00 0.00 0.00 3.01
143 159 1.363744 GGAACAGACATGGAGCGAAG 58.636 55.000 0.00 0.00 0.00 3.79
158 174 1.076014 AAACCCCCATGGACGGAAC 59.924 57.895 21.16 0.00 38.00 3.62
182 199 4.755411 AGTGTATTGTTAGTGGTCATCCG 58.245 43.478 0.00 0.00 36.30 4.18
214 231 2.933492 GCATACGGTTGTGCCTGAGTTA 60.933 50.000 6.87 0.00 33.86 2.24
215 232 1.808411 CATACGGTTGTGCCTGAGTT 58.192 50.000 0.00 0.00 34.25 3.01
217 234 0.673333 TGCATACGGTTGTGCCTGAG 60.673 55.000 13.36 0.00 39.05 3.35
222 239 1.002468 GGATCATGCATACGGTTGTGC 60.002 52.381 0.00 10.21 40.19 4.57
225 242 4.572985 AATTGGATCATGCATACGGTTG 57.427 40.909 0.00 0.00 0.00 3.77
246 269 1.340893 CCACCCACACAGCAATCCATA 60.341 52.381 0.00 0.00 0.00 2.74
274 297 4.228567 GAGGAGCGTAGGGCCAGC 62.229 72.222 6.18 8.59 45.17 4.85
275 298 3.541713 GGAGGAGCGTAGGGCCAG 61.542 72.222 6.18 0.00 45.17 4.85
276 299 3.696518 ATGGAGGAGCGTAGGGCCA 62.697 63.158 6.18 0.00 45.17 5.36
278 301 2.093537 CTGATGGAGGAGCGTAGGGC 62.094 65.000 0.00 0.00 44.05 5.19
297 320 0.036294 AGGCTAGAAACAGGGCGAAC 60.036 55.000 0.00 0.00 0.00 3.95
342 369 5.391310 CCAAGACATCAAAGTGTATCAGTGC 60.391 44.000 0.00 0.00 31.16 4.40
362 407 1.883926 CCGTACCAAAAAGTCCCCAAG 59.116 52.381 0.00 0.00 0.00 3.61
368 413 8.801715 TCGTATTATATCCGTACCAAAAAGTC 57.198 34.615 0.00 0.00 0.00 3.01
369 414 9.415544 GATCGTATTATATCCGTACCAAAAAGT 57.584 33.333 0.00 0.00 0.00 2.66
391 437 6.760298 CCACCAATCTATCTATCATTGGATCG 59.240 42.308 15.25 4.92 46.66 3.69
443 509 2.039613 AGAAAGCAGAGGGGAGTTGAAG 59.960 50.000 0.00 0.00 0.00 3.02
449 515 4.410555 AGGTATAAAGAAAGCAGAGGGGAG 59.589 45.833 0.00 0.00 0.00 4.30
478 544 1.663494 GCGCAGAAGACGAAAACAAG 58.337 50.000 0.30 0.00 0.00 3.16
514 580 7.749666 TCTAGGGAATGAATAAAATCCAGAGG 58.250 38.462 0.00 0.00 33.48 3.69
525 591 7.734865 ACTGATGGTGTATCTAGGGAATGAATA 59.265 37.037 0.00 0.00 36.71 1.75
537 603 0.753262 GCCGGACTGATGGTGTATCT 59.247 55.000 5.05 0.00 36.71 1.98
539 605 1.139058 GAAGCCGGACTGATGGTGTAT 59.861 52.381 5.05 0.00 0.00 2.29
544 610 1.808133 GCTAAGAAGCCGGACTGATGG 60.808 57.143 5.05 0.00 43.40 3.51
574 640 2.324477 CGCGCGATTTCCATGGTC 59.676 61.111 28.94 0.63 0.00 4.02
600 679 1.004080 CACAGGAGTGGCAGTCAGG 60.004 63.158 22.95 15.97 42.13 3.86
671 887 1.451207 CCACATCATCGGGCGGAAA 60.451 57.895 0.00 0.00 0.00 3.13
696 912 4.709886 GCCTAACTGGAACATACCCAATTT 59.290 41.667 0.00 0.00 38.20 1.82
710 926 2.237143 TGTCTCCTGAATGCCTAACTGG 59.763 50.000 0.00 0.00 39.35 4.00
727 943 1.732941 TTGAAACACACGCACTGTCT 58.267 45.000 0.00 0.00 0.00 3.41
746 964 4.098349 AGCACAACACACATGTCTGAATTT 59.902 37.500 8.21 0.00 38.45 1.82
771 989 3.679389 ACCCTCAGCAAAATCTGTACAG 58.321 45.455 17.17 17.17 35.63 2.74
887 1115 4.543590 ACTTAACATCTGGTCCAGTGAG 57.456 45.455 18.65 11.70 32.61 3.51
925 1169 8.700051 AGACTACAATCTGCACAGAAGTTATAT 58.300 33.333 4.14 0.00 41.36 0.86
927 1171 6.815641 CAGACTACAATCTGCACAGAAGTTAT 59.184 38.462 4.14 0.00 39.77 1.89
947 1191 4.469657 AGCGGAGAAGATAGATTCAGACT 58.530 43.478 0.00 0.00 0.00 3.24
1050 1295 0.322816 GGAACAGATCAGCCCTTGCA 60.323 55.000 0.00 0.00 41.13 4.08
1143 1388 2.289002 GACTCTGAAACTGGTGCTTGTG 59.711 50.000 0.00 0.00 0.00 3.33
1148 1393 2.139118 GTCTGACTCTGAAACTGGTGC 58.861 52.381 0.00 0.00 0.00 5.01
1153 1398 5.788450 CCTAATGTGTCTGACTCTGAAACT 58.212 41.667 9.51 0.00 0.00 2.66
1320 1565 1.365633 CTCATAGCTGGCTCCGGAC 59.634 63.158 0.00 0.00 0.00 4.79
1377 1622 4.649674 ACGATGTTATCCTGTCCAGTGTAT 59.350 41.667 0.00 0.00 0.00 2.29
1425 1670 1.067060 CATCCGAGACCATGCTTACGA 59.933 52.381 0.00 0.00 0.00 3.43
1503 1748 3.463944 CCATGTATACTTTCCGTGACCC 58.536 50.000 4.17 0.00 0.00 4.46
1518 1763 4.119556 TGTGTTTCCATTTCCCCATGTA 57.880 40.909 0.00 0.00 0.00 2.29
1526 1771 3.672241 GCCGGTGTATGTGTTTCCATTTC 60.672 47.826 1.90 0.00 0.00 2.17
1539 1784 5.738783 GCCATTTTTCATATTGCCGGTGTAT 60.739 40.000 1.90 0.00 0.00 2.29
1572 1817 7.425224 TTTCCAAGTAAATGTTCCTTTTCCA 57.575 32.000 0.00 0.00 0.00 3.53
1578 1823 7.070571 TCACCATTTTTCCAAGTAAATGTTCCT 59.929 33.333 0.00 0.00 39.14 3.36
1647 1892 6.808704 CACAATCACTCCATGTATAGATACCG 59.191 42.308 0.00 0.00 32.33 4.02
1773 2018 3.665190 CACACCTCTGTTCCTTAGGTTC 58.335 50.000 0.00 0.00 41.75 3.62
1818 2063 2.095853 GTGAAGTATGCGTGAACCATGG 59.904 50.000 11.19 11.19 0.00 3.66
2272 2517 5.723672 TCAAATGGTATTACCCGCAAAAA 57.276 34.783 10.37 0.00 37.50 1.94
2273 2518 5.723672 TTCAAATGGTATTACCCGCAAAA 57.276 34.783 10.37 0.00 37.50 2.44
2274 2519 5.723672 TTTCAAATGGTATTACCCGCAAA 57.276 34.783 10.37 0.62 37.50 3.68
2275 2520 5.186021 ACATTTCAAATGGTATTACCCGCAA 59.814 36.000 14.70 0.00 37.50 4.85
2276 2521 4.707448 ACATTTCAAATGGTATTACCCGCA 59.293 37.500 14.70 0.00 37.50 5.69
2277 2522 5.257082 ACATTTCAAATGGTATTACCCGC 57.743 39.130 14.70 0.00 37.50 6.13
2278 2523 6.857956 TCAACATTTCAAATGGTATTACCCG 58.142 36.000 14.70 0.00 37.50 5.28
2286 2531 9.807649 GAGCTATTTATCAACATTTCAAATGGT 57.192 29.630 14.70 4.76 0.00 3.55
2287 2532 8.961092 CGAGCTATTTATCAACATTTCAAATGG 58.039 33.333 14.70 0.00 0.00 3.16
2288 2533 8.474577 GCGAGCTATTTATCAACATTTCAAATG 58.525 33.333 8.67 8.67 0.00 2.32
2296 2541 6.037172 ACGAAAAGCGAGCTATTTATCAACAT 59.963 34.615 0.00 0.00 44.57 2.71
2297 2542 5.350365 ACGAAAAGCGAGCTATTTATCAACA 59.650 36.000 0.00 0.00 44.57 3.33
2320 2565 6.163135 AGCCTCATTTACCAGACAGTATAC 57.837 41.667 0.00 0.00 0.00 1.47
2322 2567 5.900123 ACTAGCCTCATTTACCAGACAGTAT 59.100 40.000 0.00 0.00 0.00 2.12
2328 2573 5.211973 AGATGACTAGCCTCATTTACCAGA 58.788 41.667 0.00 0.00 30.62 3.86
2341 2586 6.049149 TGCAATTACAAGGTAGATGACTAGC 58.951 40.000 0.00 0.00 44.48 3.42
2392 2637 9.270576 CAGAAGAGAAATAATGATTTGTTGTCG 57.729 33.333 0.00 0.00 35.33 4.35
2408 2674 6.597672 TGCACTGTTACTTTTCAGAAGAGAAA 59.402 34.615 7.70 0.00 35.82 2.52
2409 2675 6.112734 TGCACTGTTACTTTTCAGAAGAGAA 58.887 36.000 7.70 0.00 35.84 2.87
2410 2676 5.670485 TGCACTGTTACTTTTCAGAAGAGA 58.330 37.500 7.70 0.00 35.84 3.10
2411 2677 5.991328 TGCACTGTTACTTTTCAGAAGAG 57.009 39.130 0.00 0.00 35.84 2.85
2412 2678 6.037172 GTCTTGCACTGTTACTTTTCAGAAGA 59.963 38.462 0.00 0.00 35.84 2.87
2413 2679 6.037610 AGTCTTGCACTGTTACTTTTCAGAAG 59.962 38.462 0.00 0.00 32.26 2.85
2414 2680 5.880332 AGTCTTGCACTGTTACTTTTCAGAA 59.120 36.000 0.00 0.00 32.26 3.02
2415 2681 5.428253 AGTCTTGCACTGTTACTTTTCAGA 58.572 37.500 0.00 0.00 32.26 3.27
2416 2682 5.741388 AGTCTTGCACTGTTACTTTTCAG 57.259 39.130 0.00 0.00 32.26 3.02
2417 2683 6.238374 GCTAAGTCTTGCACTGTTACTTTTCA 60.238 38.462 0.00 0.00 34.56 2.69
2418 2684 6.017852 AGCTAAGTCTTGCACTGTTACTTTTC 60.018 38.462 0.00 0.00 34.56 2.29
2419 2685 5.823045 AGCTAAGTCTTGCACTGTTACTTTT 59.177 36.000 0.00 0.00 34.56 2.27
2420 2686 5.237344 CAGCTAAGTCTTGCACTGTTACTTT 59.763 40.000 0.00 0.00 34.56 2.66
2421 2687 4.752101 CAGCTAAGTCTTGCACTGTTACTT 59.248 41.667 0.00 0.00 34.56 2.24
2422 2688 4.202264 ACAGCTAAGTCTTGCACTGTTACT 60.202 41.667 9.81 0.00 34.89 2.24
2423 2689 4.058817 ACAGCTAAGTCTTGCACTGTTAC 58.941 43.478 9.81 0.00 34.89 2.50
2424 2690 4.058124 CACAGCTAAGTCTTGCACTGTTA 58.942 43.478 11.95 0.00 36.28 2.41
2425 2691 2.874701 CACAGCTAAGTCTTGCACTGTT 59.125 45.455 11.95 0.00 36.28 3.16
2426 2692 2.487934 CACAGCTAAGTCTTGCACTGT 58.512 47.619 9.81 9.81 38.84 3.55
2427 2693 1.196354 GCACAGCTAAGTCTTGCACTG 59.804 52.381 0.00 2.93 34.56 3.66
2428 2694 1.071385 AGCACAGCTAAGTCTTGCACT 59.929 47.619 0.00 0.00 36.99 4.40
2469 2735 3.595190 AGCTGTTGGACTAGGGTTTTT 57.405 42.857 0.00 0.00 0.00 1.94
2470 2736 3.595190 AAGCTGTTGGACTAGGGTTTT 57.405 42.857 0.00 0.00 0.00 2.43
2471 2737 3.222603 CAAAGCTGTTGGACTAGGGTTT 58.777 45.455 0.00 0.00 0.00 3.27
2472 2738 2.863809 CAAAGCTGTTGGACTAGGGTT 58.136 47.619 0.00 0.00 0.00 4.11
2473 2739 1.545651 GCAAAGCTGTTGGACTAGGGT 60.546 52.381 9.63 0.00 0.00 4.34
2474 2740 1.168714 GCAAAGCTGTTGGACTAGGG 58.831 55.000 9.63 0.00 0.00 3.53
2475 2741 1.896220 TGCAAAGCTGTTGGACTAGG 58.104 50.000 9.63 0.00 0.00 3.02
2504 2770 4.949856 TCCCATCAGAAAGAGGCAATAAAC 59.050 41.667 0.00 0.00 0.00 2.01
2518 2784 7.894753 TTTAAAATGCATATGTCCCATCAGA 57.105 32.000 0.00 0.00 0.00 3.27
2545 2815 7.218228 TGTTTCAACATCATGCTCTGTTATT 57.782 32.000 7.52 0.00 33.96 1.40
2590 2860 9.182214 ACAATAGCAGAATCAACATTACAGAAT 57.818 29.630 0.00 0.00 0.00 2.40
2603 2873 7.764443 TGTGTACCTAAAGACAATAGCAGAATC 59.236 37.037 0.00 0.00 0.00 2.52
2617 2887 8.718734 GTTATCTTTCCAACTGTGTACCTAAAG 58.281 37.037 0.00 0.00 0.00 1.85
2776 3046 1.203050 ACAAACCTGAAGACCATGGGG 60.203 52.381 18.09 8.88 41.29 4.96
2785 3055 7.607991 AGGTCAATCAGTATAACAAACCTGAAG 59.392 37.037 0.00 0.00 37.48 3.02
2794 3064 6.318648 GGCATGAAAGGTCAATCAGTATAACA 59.681 38.462 0.00 0.00 37.30 2.41
2797 3067 6.057533 CAGGCATGAAAGGTCAATCAGTATA 58.942 40.000 0.00 0.00 37.30 1.47
2981 3309 4.752146 TGGAGATCATATAATCTGCAGCG 58.248 43.478 9.47 0.00 45.61 5.18
3151 3508 9.914834 AGCTACAATACATAATTTCCTACCAAA 57.085 29.630 0.00 0.00 0.00 3.28
3152 3509 9.914834 AAGCTACAATACATAATTTCCTACCAA 57.085 29.630 0.00 0.00 0.00 3.67
3172 3529 8.628882 AATCAGTAAAACACAAAACAAGCTAC 57.371 30.769 0.00 0.00 0.00 3.58
3397 3759 2.294979 ACGTGAACAAGGAAAACCTCC 58.705 47.619 0.00 0.00 45.81 4.30
3624 3986 1.544825 CCTCTCGCCAGGAAGGTTCA 61.545 60.000 0.00 0.00 40.61 3.18
3666 4028 6.146184 CAGTAAGCAAAGACGATTTTCAGAGA 59.854 38.462 0.00 0.00 0.00 3.10
3684 4046 5.053145 CCACAAGACCATATCTCAGTAAGC 58.947 45.833 0.00 0.00 36.27 3.09
3691 4053 5.468072 CAGTTATGCCACAAGACCATATCTC 59.532 44.000 0.00 0.00 36.27 2.75
3739 4101 4.020543 ACTAGCTGAACAACAACCCAAAA 58.979 39.130 0.00 0.00 0.00 2.44
3740 4102 3.626930 ACTAGCTGAACAACAACCCAAA 58.373 40.909 0.00 0.00 0.00 3.28
3744 4107 8.943909 AGTATTATACTAGCTGAACAACAACC 57.056 34.615 2.64 0.00 37.23 3.77
3794 4160 8.850156 GGTGGATAACATATTTCAGCAAGTTAT 58.150 33.333 0.00 0.00 35.55 1.89
3796 4162 6.891908 AGGTGGATAACATATTTCAGCAAGTT 59.108 34.615 0.00 0.00 0.00 2.66
3813 4179 7.344612 TCTCTATCTTTGCTAACAAGGTGGATA 59.655 37.037 0.00 0.00 37.04 2.59
3816 4182 5.734720 TCTCTATCTTTGCTAACAAGGTGG 58.265 41.667 0.00 0.00 37.04 4.61
3857 4223 7.672983 TTCACCAGAAATCTCTTCACAATAC 57.327 36.000 0.00 0.00 0.00 1.89
3862 4228 7.699812 GCATATTTTCACCAGAAATCTCTTCAC 59.300 37.037 0.00 0.00 42.90 3.18
3876 4242 6.862209 TGGATGTTAACTGCATATTTTCACC 58.138 36.000 7.22 0.00 0.00 4.02
3877 4243 7.538575 ACTGGATGTTAACTGCATATTTTCAC 58.461 34.615 7.22 0.00 0.00 3.18
3879 4245 7.148086 TGGACTGGATGTTAACTGCATATTTTC 60.148 37.037 7.22 0.00 0.00 2.29
3896 4262 0.603707 CAACACACGCTGGACTGGAT 60.604 55.000 0.00 0.00 0.00 3.41
3903 4269 1.509644 ATGAGCACAACACACGCTGG 61.510 55.000 0.00 0.00 35.75 4.85
3907 4273 3.433709 TGAAAAATGAGCACAACACACG 58.566 40.909 0.00 0.00 0.00 4.49
3917 4283 6.201425 TCTGCACAAAAATCTGAAAAATGAGC 59.799 34.615 0.00 0.00 0.00 4.26
3918 4284 7.437267 ACTCTGCACAAAAATCTGAAAAATGAG 59.563 33.333 0.00 0.00 0.00 2.90
3943 4309 6.258947 TGGTGCAAAATTAGTTTTAGGCAAAC 59.741 34.615 9.17 7.13 44.73 2.93
3955 4323 6.222389 TCTTGGTCAATTGGTGCAAAATTAG 58.778 36.000 5.42 3.51 0.00 1.73
4003 4439 5.309323 TGCATGAAACACTACAATAAGGC 57.691 39.130 0.00 0.00 0.00 4.35
4011 4447 4.404507 ACGACAATGCATGAAACACTAC 57.595 40.909 0.00 0.00 0.00 2.73
4025 4461 5.278022 GCCTGAAAAGAAGAAGAACGACAAT 60.278 40.000 0.00 0.00 0.00 2.71
4032 4468 7.939039 TCTTTATCTGCCTGAAAAGAAGAAGAA 59.061 33.333 0.00 0.00 35.58 2.52
4033 4469 7.389053 GTCTTTATCTGCCTGAAAAGAAGAAGA 59.611 37.037 9.03 0.00 39.08 2.87
4034 4470 7.390162 AGTCTTTATCTGCCTGAAAAGAAGAAG 59.610 37.037 9.03 0.00 39.08 2.85
4060 4499 5.478407 TGTGACTTCAGAAATTCGCTATCA 58.522 37.500 6.56 0.00 0.00 2.15
4132 4571 3.156334 CGTGTTCGTAGGTGCTGC 58.844 61.111 0.00 0.00 0.00 5.25
4153 4592 2.356695 TGTCATGGTTCGACGATACGAT 59.643 45.455 0.00 0.44 41.82 3.73
4156 4595 1.852895 GCTGTCATGGTTCGACGATAC 59.147 52.381 0.00 0.00 36.11 2.24
4257 4696 9.396022 GAAGAAACAACATTTATCCCATCTAGA 57.604 33.333 0.00 0.00 0.00 2.43
4258 4697 9.177608 TGAAGAAACAACATTTATCCCATCTAG 57.822 33.333 0.00 0.00 0.00 2.43
4260 4699 7.671398 ACTGAAGAAACAACATTTATCCCATCT 59.329 33.333 0.00 0.00 0.00 2.90
4261 4700 7.830739 ACTGAAGAAACAACATTTATCCCATC 58.169 34.615 0.00 0.00 0.00 3.51
4270 4709 7.111247 TCATTGGAACTGAAGAAACAACATT 57.889 32.000 0.00 0.00 0.00 2.71
4276 4715 7.206981 TGAAGATCATTGGAACTGAAGAAAC 57.793 36.000 0.00 0.00 0.00 2.78
4280 4719 6.814506 AGTTGAAGATCATTGGAACTGAAG 57.185 37.500 0.00 0.00 0.00 3.02
4300 4740 8.057536 TGCAATGTTTATTATACCCGAAAGTT 57.942 30.769 0.00 0.00 0.00 2.66
4301 4741 7.633193 TGCAATGTTTATTATACCCGAAAGT 57.367 32.000 0.00 0.00 0.00 2.66
4302 4742 6.636850 GCTGCAATGTTTATTATACCCGAAAG 59.363 38.462 0.00 0.00 0.00 2.62
4305 4745 5.373222 AGCTGCAATGTTTATTATACCCGA 58.627 37.500 1.02 0.00 0.00 5.14
4332 4772 5.865085 TGAAGCACAAGAGTTGGTACTATT 58.135 37.500 0.00 0.00 36.28 1.73
4340 4780 4.629200 GGATACTCTGAAGCACAAGAGTTG 59.371 45.833 17.08 0.00 37.75 3.16
4344 4784 3.367395 CGTGGATACTCTGAAGCACAAGA 60.367 47.826 0.00 0.00 37.61 3.02
4346 4786 2.353704 CCGTGGATACTCTGAAGCACAA 60.354 50.000 0.00 0.00 37.61 3.33
4348 4788 1.927895 CCGTGGATACTCTGAAGCAC 58.072 55.000 0.00 0.00 37.61 4.40
4354 4794 3.068165 TGTGAATAGCCGTGGATACTCTG 59.932 47.826 0.00 0.00 37.61 3.35
4361 4801 2.037902 TGAAAGTGTGAATAGCCGTGGA 59.962 45.455 0.00 0.00 0.00 4.02
4362 4802 2.159627 GTGAAAGTGTGAATAGCCGTGG 59.840 50.000 0.00 0.00 0.00 4.94
4363 4803 2.805671 TGTGAAAGTGTGAATAGCCGTG 59.194 45.455 0.00 0.00 0.00 4.94
4364 4804 3.067106 CTGTGAAAGTGTGAATAGCCGT 58.933 45.455 0.00 0.00 0.00 5.68
4367 4807 4.752101 ACTGTCTGTGAAAGTGTGAATAGC 59.248 41.667 0.00 0.00 27.65 2.97
4369 4809 7.284919 TCTACTGTCTGTGAAAGTGTGAATA 57.715 36.000 0.99 0.00 31.84 1.75
4370 4810 6.161855 TCTACTGTCTGTGAAAGTGTGAAT 57.838 37.500 0.99 0.00 31.84 2.57
4371 4811 5.592104 TCTACTGTCTGTGAAAGTGTGAA 57.408 39.130 0.99 0.00 31.84 3.18
4372 4812 5.536538 AGATCTACTGTCTGTGAAAGTGTGA 59.463 40.000 0.00 0.77 31.84 3.58
4373 4813 5.632764 CAGATCTACTGTCTGTGAAAGTGTG 59.367 44.000 0.00 0.00 41.30 3.82
4374 4814 5.777802 CAGATCTACTGTCTGTGAAAGTGT 58.222 41.667 0.00 0.00 41.30 3.55
4388 4828 1.203313 ACACCCACCCACAGATCTACT 60.203 52.381 0.00 0.00 0.00 2.57
4389 4829 1.207329 GACACCCACCCACAGATCTAC 59.793 57.143 0.00 0.00 0.00 2.59
4390 4830 1.203250 TGACACCCACCCACAGATCTA 60.203 52.381 0.00 0.00 0.00 1.98
4391 4831 0.473694 TGACACCCACCCACAGATCT 60.474 55.000 0.00 0.00 0.00 2.75
4392 4832 0.620556 ATGACACCCACCCACAGATC 59.379 55.000 0.00 0.00 0.00 2.75
4393 4833 1.839994 CTATGACACCCACCCACAGAT 59.160 52.381 0.00 0.00 0.00 2.90
4394 4834 1.275666 CTATGACACCCACCCACAGA 58.724 55.000 0.00 0.00 0.00 3.41
4395 4835 0.984230 ACTATGACACCCACCCACAG 59.016 55.000 0.00 0.00 0.00 3.66
4396 4836 0.690192 CACTATGACACCCACCCACA 59.310 55.000 0.00 0.00 0.00 4.17
4397 4837 0.690762 ACACTATGACACCCACCCAC 59.309 55.000 0.00 0.00 0.00 4.61
4398 4838 0.981183 GACACTATGACACCCACCCA 59.019 55.000 0.00 0.00 0.00 4.51
4399 4839 0.981183 TGACACTATGACACCCACCC 59.019 55.000 0.00 0.00 0.00 4.61
4400 4840 1.623811 AGTGACACTATGACACCCACC 59.376 52.381 6.24 0.00 42.45 4.61
4424 4864 3.323115 AGATACGACACATGCCATGATCT 59.677 43.478 12.53 5.14 0.00 2.75
4431 4871 4.296690 GGTAAGTAGATACGACACATGCC 58.703 47.826 0.00 0.00 0.00 4.40
4438 4878 4.494855 GGTGACACGGTAAGTAGATACGAC 60.495 50.000 0.00 0.00 0.00 4.34
4440 4880 3.544834 CGGTGACACGGTAAGTAGATACG 60.545 52.174 5.04 0.00 0.00 3.06
4461 4901 2.036733 TGACAACCTACTGAAAGACCCG 59.963 50.000 0.00 0.00 37.43 5.28
4466 4906 3.403038 CCCAGTGACAACCTACTGAAAG 58.597 50.000 5.99 0.00 45.46 2.62
4473 4913 1.697432 CAGAACCCCAGTGACAACCTA 59.303 52.381 0.00 0.00 0.00 3.08
4477 4917 1.073763 CATCCAGAACCCCAGTGACAA 59.926 52.381 0.00 0.00 0.00 3.18
4478 4918 0.692476 CATCCAGAACCCCAGTGACA 59.308 55.000 0.00 0.00 0.00 3.58
4487 4927 1.575447 AAGCCCTCCCATCCAGAACC 61.575 60.000 0.00 0.00 0.00 3.62
4498 4938 1.272147 ACAGTTCAATGGAAGCCCTCC 60.272 52.381 0.00 0.00 45.64 4.30
4502 4942 3.146066 TGTGTACAGTTCAATGGAAGCC 58.854 45.455 0.00 0.00 32.62 4.35
4507 4947 6.558771 TTTCTGATGTGTACAGTTCAATGG 57.441 37.500 0.00 0.00 36.81 3.16
4521 4984 6.986817 CGGGTCTGTTAGATTATTTCTGATGT 59.013 38.462 0.00 0.00 35.79 3.06
4525 4988 6.338146 TCACGGGTCTGTTAGATTATTTCTG 58.662 40.000 0.00 0.00 35.79 3.02
4527 4990 6.817140 AGTTCACGGGTCTGTTAGATTATTTC 59.183 38.462 0.00 0.00 0.00 2.17
4534 4997 2.036733 CCAAGTTCACGGGTCTGTTAGA 59.963 50.000 0.00 0.00 0.00 2.10
4536 4999 1.764134 ACCAAGTTCACGGGTCTGTTA 59.236 47.619 0.00 0.00 0.00 2.41
4561 5028 5.825151 TCGACAAGATCTATCATCAGACAGT 59.175 40.000 0.00 0.00 0.00 3.55
4562 5029 6.017192 ACTCGACAAGATCTATCATCAGACAG 60.017 42.308 0.00 0.00 0.00 3.51
4567 5034 5.240403 CCTGACTCGACAAGATCTATCATCA 59.760 44.000 0.00 1.31 0.00 3.07
4569 5036 5.136828 ACCTGACTCGACAAGATCTATCAT 58.863 41.667 0.00 0.00 0.00 2.45
4570 5037 4.527944 ACCTGACTCGACAAGATCTATCA 58.472 43.478 0.00 0.00 0.00 2.15
4580 5047 1.853114 GACAGCGACCTGACTCGACA 61.853 60.000 0.00 0.00 41.77 4.35
4583 5050 1.154131 CTGACAGCGACCTGACTCG 60.154 63.158 0.00 0.00 41.77 4.18
4593 5060 1.935873 CATGTATCCCAACTGACAGCG 59.064 52.381 1.25 0.00 0.00 5.18
4617 5095 7.398024 ACTATATCAGACTAATTTGGGCATCC 58.602 38.462 0.00 0.00 0.00 3.51
4620 5098 6.486657 GCAACTATATCAGACTAATTTGGGCA 59.513 38.462 0.00 0.00 0.00 5.36
4623 5101 8.153550 AGGAGCAACTATATCAGACTAATTTGG 58.846 37.037 0.00 0.00 0.00 3.28
4631 5109 6.478344 CACAGAAAGGAGCAACTATATCAGAC 59.522 42.308 0.00 0.00 0.00 3.51
4639 5117 5.118990 GCATATCACAGAAAGGAGCAACTA 58.881 41.667 0.00 0.00 0.00 2.24
4640 5118 3.944015 GCATATCACAGAAAGGAGCAACT 59.056 43.478 0.00 0.00 0.00 3.16
4641 5119 3.065925 GGCATATCACAGAAAGGAGCAAC 59.934 47.826 0.00 0.00 0.00 4.17
4651 5129 2.846206 AGGGAACAAGGCATATCACAGA 59.154 45.455 0.00 0.00 0.00 3.41
4652 5130 3.287867 AGGGAACAAGGCATATCACAG 57.712 47.619 0.00 0.00 0.00 3.66
4664 5142 6.264518 GTCCATACAGAAAGAAAAGGGAACAA 59.735 38.462 0.00 0.00 0.00 2.83
4670 5148 4.944317 GGAGGTCCATACAGAAAGAAAAGG 59.056 45.833 0.00 0.00 35.64 3.11
4671 5149 5.645497 CAGGAGGTCCATACAGAAAGAAAAG 59.355 44.000 0.00 0.00 38.89 2.27
4675 5153 2.501723 GCAGGAGGTCCATACAGAAAGA 59.498 50.000 0.00 0.00 38.89 2.52
4676 5154 2.237143 TGCAGGAGGTCCATACAGAAAG 59.763 50.000 0.00 0.00 38.89 2.62
4680 5158 1.198713 ACTGCAGGAGGTCCATACAG 58.801 55.000 19.93 10.00 38.89 2.74
4682 5160 1.834263 AGAACTGCAGGAGGTCCATAC 59.166 52.381 19.93 0.00 39.56 2.39
4684 5162 2.254152 TAGAACTGCAGGAGGTCCAT 57.746 50.000 19.93 0.00 39.56 3.41
4686 5164 1.834263 ACATAGAACTGCAGGAGGTCC 59.166 52.381 19.93 0.04 39.56 4.46
4691 5176 4.284490 AGAACTGAACATAGAACTGCAGGA 59.716 41.667 19.93 0.02 0.00 3.86
4710 5195 8.946085 TGGTCATATCATAACAAGAACAAGAAC 58.054 33.333 0.00 0.00 0.00 3.01
4719 5204 7.275183 TGTTCTCCTGGTCATATCATAACAAG 58.725 38.462 0.00 0.00 0.00 3.16
4720 5205 7.194112 TGTTCTCCTGGTCATATCATAACAA 57.806 36.000 0.00 0.00 0.00 2.83
4721 5206 6.806668 TGTTCTCCTGGTCATATCATAACA 57.193 37.500 0.00 0.00 0.00 2.41
4722 5207 9.950496 AATATGTTCTCCTGGTCATATCATAAC 57.050 33.333 12.56 0.00 33.96 1.89
4736 5221 6.947733 TGTGGACAATGAAAATATGTTCTCCT 59.052 34.615 7.16 0.00 0.00 3.69
4754 5239 4.808324 ATCTGCACAAGATCATTGTGGACA 60.808 41.667 25.76 17.76 42.27 4.02
4772 5261 1.228184 CATCCTCCTGGGCATCTGC 60.228 63.158 0.00 0.00 41.14 4.26
4903 5392 0.178301 GGAGATCCACTTCCCCGAAC 59.822 60.000 0.00 0.00 35.64 3.95
4906 5395 1.826024 CAGGAGATCCACTTCCCCG 59.174 63.158 0.92 0.00 38.89 5.73
4915 5404 1.148048 GCCTGGAAGCAGGAGATCC 59.852 63.158 0.00 0.00 45.00 3.36
4939 5428 2.208431 GATCGAAATGAGCCTCACCTG 58.792 52.381 0.00 0.00 0.00 4.00
4948 5437 8.864069 AGTTACAGAATAGTGATCGAAATGAG 57.136 34.615 0.00 0.00 0.00 2.90
4967 5456 6.670077 TGCAATGCGAATATACAAGTTACA 57.330 33.333 0.00 0.00 0.00 2.41
4968 5457 6.140737 GCTTGCAATGCGAATATACAAGTTAC 59.859 38.462 0.00 0.00 36.34 2.50
4969 5458 6.038161 AGCTTGCAATGCGAATATACAAGTTA 59.962 34.615 0.00 0.00 42.59 2.24
4970 5459 5.036737 GCTTGCAATGCGAATATACAAGTT 58.963 37.500 0.00 0.00 36.34 2.66
4972 5461 4.673761 CAGCTTGCAATGCGAATATACAAG 59.326 41.667 0.00 8.07 42.59 3.16
4975 5496 2.975851 GCAGCTTGCAATGCGAATATAC 59.024 45.455 9.14 0.00 44.26 1.47
4979 5500 4.489249 GCAGCTTGCAATGCGAAT 57.511 50.000 9.14 0.00 44.26 3.34
4996 5517 0.038892 GCTCCCACTTTGTGCATGTG 60.039 55.000 0.00 0.00 31.34 3.21
5031 5552 1.889170 CCTGCCAAAGAAAAGGGAGAC 59.111 52.381 1.31 0.00 45.20 3.36
5042 5563 0.394899 GGATCTGGACCCTGCCAAAG 60.395 60.000 0.00 0.00 37.52 2.77
5329 5850 0.322816 CTGGTTGAGGGATGGTGGTG 60.323 60.000 0.00 0.00 0.00 4.17
5334 5855 1.826385 GTTCACTGGTTGAGGGATGG 58.174 55.000 0.00 0.00 32.60 3.51
5337 5868 1.070786 GCGTTCACTGGTTGAGGGA 59.929 57.895 0.00 0.00 34.94 4.20
5338 5869 0.951040 GAGCGTTCACTGGTTGAGGG 60.951 60.000 0.00 0.00 34.94 4.30
5339 5870 0.951040 GGAGCGTTCACTGGTTGAGG 60.951 60.000 0.53 0.00 34.94 3.86
5340 5871 0.249868 TGGAGCGTTCACTGGTTGAG 60.250 55.000 0.53 0.00 34.94 3.02
5341 5872 0.396435 ATGGAGCGTTCACTGGTTGA 59.604 50.000 0.53 0.00 0.00 3.18
5342 5873 1.238439 AATGGAGCGTTCACTGGTTG 58.762 50.000 0.53 0.00 0.00 3.77
5343 5874 1.880027 GAAATGGAGCGTTCACTGGTT 59.120 47.619 0.53 0.00 0.00 3.67
5344 5875 1.523758 GAAATGGAGCGTTCACTGGT 58.476 50.000 0.53 0.00 0.00 4.00
5378 5909 2.803956 TCCTCGTTCTGTACACAGGAT 58.196 47.619 9.41 0.00 43.91 3.24
5379 5910 2.281539 TCCTCGTTCTGTACACAGGA 57.718 50.000 9.41 0.00 43.91 3.86
5407 5959 1.216710 CAGAAGACCCTCTGCGGAC 59.783 63.158 0.00 0.00 36.67 4.79
5417 5969 1.201429 TTCCAGCCCTCCAGAAGACC 61.201 60.000 0.00 0.00 0.00 3.85
5454 6006 6.088824 CAGAATAAAGACATGGTTTGTGCTC 58.911 40.000 0.00 0.00 39.18 4.26
5526 6079 1.374758 CTCTTCCACAGCGGGACAC 60.375 63.158 0.00 0.00 36.46 3.67
5527 6080 1.533033 TCTCTTCCACAGCGGGACA 60.533 57.895 0.00 0.00 36.46 4.02
5546 6099 1.153804 GAAAGTCGGACGCTCCTCC 60.154 63.158 1.89 0.00 33.30 4.30
5549 6102 2.095252 GCAGAAAGTCGGACGCTCC 61.095 63.158 1.89 0.00 0.00 4.70
5554 6107 1.352156 ATTCGCGCAGAAAGTCGGAC 61.352 55.000 16.29 0.00 42.91 4.79
5576 6129 0.179161 CCTGATCTCGACGGACACAC 60.179 60.000 0.00 0.00 0.00 3.82
5672 6227 2.757868 CCTAGAGAACACTAGCAGCACT 59.242 50.000 0.00 0.00 38.66 4.40
5673 6228 2.755655 TCCTAGAGAACACTAGCAGCAC 59.244 50.000 0.00 0.00 38.66 4.40
5688 6243 7.310237 GGTTCTTTATACAGGTGTGTTCCTAGA 60.310 40.741 0.00 0.00 38.19 2.43
5770 6325 2.980233 GGAGCCACCTGTGTGCAC 60.980 66.667 10.75 10.75 41.35 4.57
5791 6346 2.180542 GCAAGAAGCACCGTTGAAACG 61.181 52.381 8.59 8.59 46.92 3.60
5792 6347 1.477105 GCAAGAAGCACCGTTGAAAC 58.523 50.000 0.00 0.00 44.79 2.78
5793 6348 3.936585 GCAAGAAGCACCGTTGAAA 57.063 47.368 0.00 0.00 44.79 2.69
5826 6381 1.658114 GAGTCCAAACCGGCAAACC 59.342 57.895 0.00 0.00 33.14 3.27
5827 6382 1.104577 TGGAGTCCAAACCGGCAAAC 61.105 55.000 10.20 0.00 33.14 2.93
5828 6383 1.104577 GTGGAGTCCAAACCGGCAAA 61.105 55.000 15.09 0.00 34.18 3.68
5829 6384 1.527380 GTGGAGTCCAAACCGGCAA 60.527 57.895 15.09 0.00 34.18 4.52
5830 6385 2.112297 GTGGAGTCCAAACCGGCA 59.888 61.111 15.09 0.00 34.18 5.69
5831 6386 2.112297 TGTGGAGTCCAAACCGGC 59.888 61.111 15.09 0.18 34.18 6.13
5832 6387 0.884704 CAGTGTGGAGTCCAAACCGG 60.885 60.000 26.27 16.40 42.47 5.28
5833 6388 1.507141 GCAGTGTGGAGTCCAAACCG 61.507 60.000 26.27 18.80 42.47 4.44
5847 6402 1.878088 GATGCATGTATGGAGGCAGTG 59.122 52.381 2.46 0.00 39.95 3.66
5857 6412 3.520691 ATCTTGCCCTGATGCATGTAT 57.479 42.857 2.46 0.00 41.70 2.29
5865 6420 2.742348 TGCATGAAATCTTGCCCTGAT 58.258 42.857 15.93 0.00 43.75 2.90
5868 6423 2.633967 TGTTTGCATGAAATCTTGCCCT 59.366 40.909 15.93 0.00 43.75 5.19
5869 6424 2.738314 GTGTTTGCATGAAATCTTGCCC 59.262 45.455 15.93 7.09 43.75 5.36
5870 6425 3.656559 AGTGTTTGCATGAAATCTTGCC 58.343 40.909 15.93 4.60 43.75 4.52
5873 6428 4.154942 AGGGAGTGTTTGCATGAAATCTT 58.845 39.130 0.00 0.00 0.00 2.40
5875 6430 5.357878 TGATAGGGAGTGTTTGCATGAAATC 59.642 40.000 0.00 0.00 0.00 2.17
5876 6431 5.263599 TGATAGGGAGTGTTTGCATGAAAT 58.736 37.500 0.00 0.00 0.00 2.17
5877 6432 4.661222 TGATAGGGAGTGTTTGCATGAAA 58.339 39.130 0.00 0.00 0.00 2.69
5888 7066 3.321950 AGAGGGGAAATGATAGGGAGTG 58.678 50.000 0.00 0.00 0.00 3.51
5921 7099 9.935241 GGTTCTCTCTTGATATATAGATTGCAA 57.065 33.333 0.00 0.00 0.00 4.08
5934 7114 6.830873 CCAATCTTTTGGTTCTCTCTTGAT 57.169 37.500 0.00 0.00 46.27 2.57
5958 7176 2.825205 ACAGTTTTTGCATGGAAGCAC 58.175 42.857 0.00 1.28 45.61 4.40
5993 7211 0.716108 CACAGCGACGGAAGATTGTC 59.284 55.000 0.00 0.00 0.00 3.18
6006 7224 1.678360 GTTTGTCTGCATTCACAGCG 58.322 50.000 0.00 0.00 37.59 5.18
6024 7242 0.318445 CGGTTTTCTGTCTCGTCCGT 60.318 55.000 0.00 0.00 33.20 4.69
6025 7243 0.318445 ACGGTTTTCTGTCTCGTCCG 60.318 55.000 0.00 0.00 41.77 4.79
6026 7244 3.582743 ACGGTTTTCTGTCTCGTCC 57.417 52.632 0.00 0.00 33.63 4.79
6034 7252 4.482386 TGATACTCGAAGACGGTTTTCTG 58.518 43.478 9.39 5.20 40.21 3.02
6037 7255 4.922103 GTCTTGATACTCGAAGACGGTTTT 59.078 41.667 0.00 0.00 38.93 2.43
6038 7256 4.483311 GTCTTGATACTCGAAGACGGTTT 58.517 43.478 0.00 0.00 38.93 3.27
6044 7262 4.618460 GCACCAAGTCTTGATACTCGAAGA 60.618 45.833 14.42 0.00 0.00 2.87
6045 7263 3.614616 GCACCAAGTCTTGATACTCGAAG 59.385 47.826 14.42 0.00 0.00 3.79
6047 7265 2.826128 AGCACCAAGTCTTGATACTCGA 59.174 45.455 14.42 0.00 0.00 4.04
6049 7267 7.717568 TCTATTAGCACCAAGTCTTGATACTC 58.282 38.462 14.42 0.00 0.00 2.59
6050 7268 7.561722 TCTCTATTAGCACCAAGTCTTGATACT 59.438 37.037 14.42 9.70 0.00 2.12
6051 7269 7.650104 GTCTCTATTAGCACCAAGTCTTGATAC 59.350 40.741 14.42 2.72 0.00 2.24
6052 7270 7.468768 CGTCTCTATTAGCACCAAGTCTTGATA 60.469 40.741 14.42 2.25 0.00 2.15
6053 7271 6.578023 GTCTCTATTAGCACCAAGTCTTGAT 58.422 40.000 14.42 0.00 0.00 2.57
6055 7273 4.800993 CGTCTCTATTAGCACCAAGTCTTG 59.199 45.833 5.53 5.53 0.00 3.02
6056 7274 4.142138 CCGTCTCTATTAGCACCAAGTCTT 60.142 45.833 0.00 0.00 0.00 3.01
6057 7275 3.381908 CCGTCTCTATTAGCACCAAGTCT 59.618 47.826 0.00 0.00 0.00 3.24
6059 7277 3.362706 TCCGTCTCTATTAGCACCAAGT 58.637 45.455 0.00 0.00 0.00 3.16
6062 7280 4.811969 TTTTCCGTCTCTATTAGCACCA 57.188 40.909 0.00 0.00 0.00 4.17
6063 7281 5.357257 TGATTTTCCGTCTCTATTAGCACC 58.643 41.667 0.00 0.00 0.00 5.01
6064 7282 6.312918 TGTTGATTTTCCGTCTCTATTAGCAC 59.687 38.462 0.00 0.00 0.00 4.40
6065 7283 6.312918 GTGTTGATTTTCCGTCTCTATTAGCA 59.687 38.462 0.00 0.00 0.00 3.49
6066 7284 6.508088 CGTGTTGATTTTCCGTCTCTATTAGC 60.508 42.308 0.00 0.00 0.00 3.09
6067 7285 6.508088 GCGTGTTGATTTTCCGTCTCTATTAG 60.508 42.308 0.00 0.00 0.00 1.73
6068 7286 5.290158 GCGTGTTGATTTTCCGTCTCTATTA 59.710 40.000 0.00 0.00 0.00 0.98
6069 7287 4.092968 GCGTGTTGATTTTCCGTCTCTATT 59.907 41.667 0.00 0.00 0.00 1.73
6070 7288 3.617263 GCGTGTTGATTTTCCGTCTCTAT 59.383 43.478 0.00 0.00 0.00 1.98
6071 7289 2.991190 GCGTGTTGATTTTCCGTCTCTA 59.009 45.455 0.00 0.00 0.00 2.43
6134 7352 1.401199 GTGTTTGGAAACCCGAACGAA 59.599 47.619 9.33 0.00 46.53 3.85
6243 7461 0.608640 TCTCGAACTGGAGAAAGCCC 59.391 55.000 0.00 0.00 39.99 5.19
6286 7504 3.381590 TCATACGATCCTGACTTGGTGAG 59.618 47.826 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.