Multiple sequence alignment - TraesCS6B01G450900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G450900 chr6B 100.000 6418 0 0 1 6418 709584862 709578445 0.000000e+00 11852.0
1 TraesCS6B01G450900 chr6A 94.947 3206 104 20 2438 5626 611657987 611661151 0.000000e+00 4970.0
2 TraesCS6B01G450900 chr6A 89.692 941 69 9 1463 2402 611656823 611657736 0.000000e+00 1175.0
3 TraesCS6B01G450900 chr6A 89.882 761 33 12 5654 6391 611661121 611661860 0.000000e+00 939.0
4 TraesCS6B01G450900 chr6A 90.368 571 32 3 809 1374 611656196 611656748 0.000000e+00 728.0
5 TraesCS6B01G450900 chr6A 93.778 450 28 0 334 783 51457067 51457516 0.000000e+00 676.0
6 TraesCS6B01G450900 chr6A 90.769 65 6 0 2319 2383 611657535 611657599 3.190000e-13 87.9
7 TraesCS6B01G450900 chr4D 85.835 1299 174 7 75 1366 484147586 484148881 0.000000e+00 1371.0
8 TraesCS6B01G450900 chr2B 84.716 1302 189 7 72 1366 135779158 135780456 0.000000e+00 1293.0
9 TraesCS6B01G450900 chr2B 75.000 580 128 14 797 1366 458105866 458106438 1.070000e-62 252.0
10 TraesCS6B01G450900 chr2B 89.437 142 14 1 2732 2872 86538411 86538270 1.840000e-40 178.0
11 TraesCS6B01G450900 chr2B 89.510 143 12 3 2732 2872 107499976 107500117 1.840000e-40 178.0
12 TraesCS6B01G450900 chr2B 78.082 146 18 9 1774 1907 232918892 232918749 5.330000e-11 80.5
13 TraesCS6B01G450900 chr7A 91.934 905 64 5 480 1377 148922162 148921260 0.000000e+00 1258.0
14 TraesCS6B01G450900 chr7A 87.931 58 6 1 1406 1463 148921266 148921210 4.150000e-07 67.6
15 TraesCS6B01G450900 chr3B 92.782 762 50 4 72 829 235889746 235888986 0.000000e+00 1098.0
16 TraesCS6B01G450900 chr3B 89.286 308 26 4 799 1101 235888986 235888681 4.700000e-101 379.0
17 TraesCS6B01G450900 chr3B 91.617 167 13 1 1096 1262 235888522 235888357 5.010000e-56 230.0
18 TraesCS6B01G450900 chr3B 90.071 141 11 3 2732 2870 127906731 127906592 5.110000e-41 180.0
19 TraesCS6B01G450900 chr3B 91.379 116 8 2 1260 1374 235888198 235888084 2.400000e-34 158.0
20 TraesCS6B01G450900 chr2D 77.178 1297 275 18 72 1354 386814288 386815577 0.000000e+00 736.0
21 TraesCS6B01G450900 chr5A 93.778 450 28 0 334 783 15031109 15031558 0.000000e+00 676.0
22 TraesCS6B01G450900 chr5A 92.199 141 10 1 2735 2874 415386577 415386437 1.410000e-46 198.0
23 TraesCS6B01G450900 chr4A 93.598 453 29 0 334 786 653958978 653958526 0.000000e+00 676.0
24 TraesCS6B01G450900 chr4A 78.894 687 113 21 683 1352 625882062 625882733 2.750000e-118 436.0
25 TraesCS6B01G450900 chr4A 88.079 151 14 4 2734 2883 227083509 227083362 6.610000e-40 176.0
26 TraesCS6B01G450900 chr1A 93.598 453 29 0 334 786 23216584 23216132 0.000000e+00 676.0
27 TraesCS6B01G450900 chr1A 93.778 450 28 0 334 783 467351537 467351986 0.000000e+00 676.0
28 TraesCS6B01G450900 chr3D 85.308 422 60 2 946 1366 571127430 571127850 9.880000e-118 435.0
29 TraesCS6B01G450900 chr7B 90.845 142 10 3 2731 2870 661170461 661170321 3.060000e-43 187.0
30 TraesCS6B01G450900 chr7B 89.510 143 12 3 2732 2872 665423375 665423234 1.840000e-40 178.0
31 TraesCS6B01G450900 chr7B 88.966 145 13 3 2732 2874 297161324 297161181 6.610000e-40 176.0
32 TraesCS6B01G450900 chr1D 86.145 166 21 2 5431 5596 435271564 435271727 1.840000e-40 178.0
33 TraesCS6B01G450900 chr3A 82.963 135 21 2 1774 1907 471374612 471374745 3.140000e-23 121.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G450900 chr6B 709578445 709584862 6417 True 11852.00 11852 100.0000 1 6418 1 chr6B.!!$R1 6417
1 TraesCS6B01G450900 chr6A 611656196 611661860 5664 False 1579.98 4970 91.1316 809 6391 5 chr6A.!!$F2 5582
2 TraesCS6B01G450900 chr4D 484147586 484148881 1295 False 1371.00 1371 85.8350 75 1366 1 chr4D.!!$F1 1291
3 TraesCS6B01G450900 chr2B 135779158 135780456 1298 False 1293.00 1293 84.7160 72 1366 1 chr2B.!!$F2 1294
4 TraesCS6B01G450900 chr2B 458105866 458106438 572 False 252.00 252 75.0000 797 1366 1 chr2B.!!$F3 569
5 TraesCS6B01G450900 chr7A 148921210 148922162 952 True 662.80 1258 89.9325 480 1463 2 chr7A.!!$R1 983
6 TraesCS6B01G450900 chr3B 235888084 235889746 1662 True 466.25 1098 91.2660 72 1374 4 chr3B.!!$R2 1302
7 TraesCS6B01G450900 chr2D 386814288 386815577 1289 False 736.00 736 77.1780 72 1354 1 chr2D.!!$F1 1282
8 TraesCS6B01G450900 chr4A 625882062 625882733 671 False 436.00 436 78.8940 683 1352 1 chr4A.!!$F1 669

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
19 20 0.037326 GGCTAGGCCCAAAGTTTTGC 60.037 55.000 4.61 0.0 44.06 3.68 F
20 21 0.678950 GCTAGGCCCAAAGTTTTGCA 59.321 50.000 0.00 0.0 36.86 4.08 F
1644 2050 0.035739 GGCACGACCCTTTTAGTCCA 59.964 55.000 0.00 0.0 0.00 4.02 F
1700 2106 0.391130 GCATAGCACGACCCAGTTGA 60.391 55.000 0.00 0.0 0.00 3.18 F
1775 2182 0.582005 GACACACACCGACTCAAAGC 59.418 55.000 0.00 0.0 0.00 3.51 F
1777 2184 0.583438 CACACACCGACTCAAAGCTG 59.417 55.000 0.00 0.0 0.00 4.24 F
1784 2191 0.883833 CGACTCAAAGCTGGCCAAAT 59.116 50.000 7.01 0.0 0.00 2.32 F
3038 3661 0.944311 CTACCACGCTGTCGCAGTTT 60.944 55.000 8.32 0.0 39.84 2.66 F
3540 4166 1.555075 TCTGTGTCCTCACCCTTATGC 59.445 52.381 0.00 0.0 43.26 3.14 F
4439 5071 0.891373 ACCCGTCATGTGAGTGAGAG 59.109 55.000 0.00 0.0 0.00 3.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1300 1685 0.038599 TCACATGTGCCAGCTTCCAT 59.961 50.000 21.38 0.00 0.00 3.41 R
1768 2175 0.248289 CCCATTTGGCCAGCTTTGAG 59.752 55.000 5.11 0.00 0.00 3.02 R
2732 3354 1.191535 GGGATTAACCAAACAGGGCC 58.808 55.000 0.00 0.00 43.89 5.80 R
2874 3496 1.305219 ACGGGTGGATTTGCACATCG 61.305 55.000 6.76 12.70 0.00 3.84 R
3136 3759 3.627395 ATCTACACCGATCAAAAGCCA 57.373 42.857 0.00 0.00 0.00 4.75 R
3444 4070 4.522405 TGCTTTCATTTGTGCCTTAGCTAA 59.478 37.500 5.94 5.94 40.80 3.09 R
3505 4131 6.058183 AGGACACAGATTATCAAAGCCATAC 58.942 40.000 0.00 0.00 0.00 2.39 R
3910 4538 0.251354 ATGTACACCAGCAGAGCCAG 59.749 55.000 0.00 0.00 0.00 4.85 R
4466 5098 0.309302 CAGCGGAGTAGACATCCTCG 59.691 60.000 0.00 0.00 34.45 4.63 R
6114 6753 0.179094 TAAGCGCGGGGTATCAACTG 60.179 55.000 8.83 0.00 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.037326 GGCTAGGCCCAAAGTTTTGC 60.037 55.000 4.61 0.00 44.06 3.68
20 21 0.678950 GCTAGGCCCAAAGTTTTGCA 59.321 50.000 0.00 0.00 36.86 4.08
21 22 1.276138 GCTAGGCCCAAAGTTTTGCAT 59.724 47.619 0.00 4.69 36.86 3.96
22 23 2.675032 GCTAGGCCCAAAGTTTTGCATC 60.675 50.000 0.00 0.00 36.86 3.91
23 24 1.720781 AGGCCCAAAGTTTTGCATCT 58.279 45.000 0.00 0.00 36.86 2.90
24 25 1.620323 AGGCCCAAAGTTTTGCATCTC 59.380 47.619 0.00 0.00 36.86 2.75
25 26 1.620323 GGCCCAAAGTTTTGCATCTCT 59.380 47.619 8.65 0.00 36.86 3.10
26 27 2.037641 GGCCCAAAGTTTTGCATCTCTT 59.962 45.455 8.65 0.00 36.86 2.85
27 28 3.258123 GGCCCAAAGTTTTGCATCTCTTA 59.742 43.478 8.65 0.00 36.86 2.10
28 29 4.237724 GCCCAAAGTTTTGCATCTCTTAC 58.762 43.478 0.00 0.00 36.86 2.34
29 30 4.261994 GCCCAAAGTTTTGCATCTCTTACA 60.262 41.667 0.00 0.00 36.86 2.41
30 31 5.222631 CCCAAAGTTTTGCATCTCTTACAC 58.777 41.667 0.00 0.00 36.86 2.90
31 32 5.221224 CCCAAAGTTTTGCATCTCTTACACA 60.221 40.000 0.00 0.00 36.86 3.72
32 33 6.449698 CCAAAGTTTTGCATCTCTTACACAT 58.550 36.000 0.00 0.00 36.86 3.21
33 34 6.364165 CCAAAGTTTTGCATCTCTTACACATG 59.636 38.462 0.00 0.00 36.86 3.21
34 35 6.882610 AAGTTTTGCATCTCTTACACATGA 57.117 33.333 0.00 0.00 0.00 3.07
35 36 6.246420 AGTTTTGCATCTCTTACACATGAC 57.754 37.500 0.00 0.00 0.00 3.06
36 37 4.926860 TTTGCATCTCTTACACATGACG 57.073 40.909 0.00 0.00 0.00 4.35
37 38 3.592898 TGCATCTCTTACACATGACGT 57.407 42.857 0.00 0.00 0.00 4.34
38 39 4.712122 TGCATCTCTTACACATGACGTA 57.288 40.909 0.00 0.00 0.00 3.57
39 40 4.672409 TGCATCTCTTACACATGACGTAG 58.328 43.478 0.00 0.00 0.00 3.51
60 61 9.750783 ACGTAGTATACTAGAATGGGTAATCAT 57.249 33.333 12.99 0.00 41.94 2.45
62 63 9.804758 GTAGTATACTAGAATGGGTAATCATGC 57.195 37.037 12.99 0.00 38.91 4.06
63 64 8.671987 AGTATACTAGAATGGGTAATCATGCT 57.328 34.615 2.75 0.00 36.93 3.79
64 65 8.754080 AGTATACTAGAATGGGTAATCATGCTC 58.246 37.037 2.75 0.00 34.91 4.26
65 66 5.894298 ACTAGAATGGGTAATCATGCTCA 57.106 39.130 0.00 0.00 34.91 4.26
66 67 6.252599 ACTAGAATGGGTAATCATGCTCAA 57.747 37.500 0.00 0.00 34.91 3.02
67 68 6.294473 ACTAGAATGGGTAATCATGCTCAAG 58.706 40.000 0.00 0.00 34.91 3.02
68 69 5.378230 AGAATGGGTAATCATGCTCAAGA 57.622 39.130 0.00 0.00 26.76 3.02
69 70 5.759059 AGAATGGGTAATCATGCTCAAGAA 58.241 37.500 0.00 0.00 26.76 2.52
70 71 5.826737 AGAATGGGTAATCATGCTCAAGAAG 59.173 40.000 0.00 0.00 26.76 2.85
94 95 4.869861 GGCAATAACATTGACATTTGGTCC 59.130 41.667 3.11 0.00 46.38 4.46
159 160 9.020731 CACTCAAAGGGGTAAAAACACTATAAT 57.979 33.333 0.00 0.00 0.00 1.28
161 162 8.584063 TCAAAGGGGTAAAAACACTATAATCC 57.416 34.615 0.00 0.00 0.00 3.01
208 209 3.196254 GCACAAACAATTGGGATGGAGAT 59.804 43.478 10.83 0.00 42.90 2.75
224 225 7.110155 GGATGGAGATTTAGTTAGACAAACCA 58.890 38.462 0.00 0.00 39.03 3.67
282 283 4.977963 CCCAATTCATGAACATAACGATGC 59.022 41.667 11.07 0.00 36.43 3.91
377 384 2.237143 TGGCTCGAGAATCCATTTCAGT 59.763 45.455 18.75 0.00 36.75 3.41
394 401 3.618351 TCAGTACTAACTTCCTCCTCCG 58.382 50.000 0.00 0.00 31.97 4.63
409 416 1.649664 CTCCGGTGCAGATGAAGAAG 58.350 55.000 0.00 0.00 0.00 2.85
413 420 1.673923 CGGTGCAGATGAAGAAGCAGA 60.674 52.381 0.00 0.00 37.72 4.26
450 457 1.629043 AGTTGTGGTCGCTTCCTCTA 58.371 50.000 0.00 0.00 0.00 2.43
546 553 2.299297 AGGTATGCAAGTAGATACCCGC 59.701 50.000 8.07 0.00 43.63 6.13
580 587 1.788229 TCGGTTAGATGAGGATGGCA 58.212 50.000 0.00 0.00 0.00 4.92
623 630 5.256474 CAAGAAGGTTAAGGATGTGTGGAT 58.744 41.667 0.00 0.00 0.00 3.41
633 640 2.421424 GGATGTGTGGATGAAAGCTCAC 59.579 50.000 0.00 0.00 33.30 3.51
634 641 1.511850 TGTGTGGATGAAAGCTCACG 58.488 50.000 0.00 0.00 33.30 4.35
649 656 2.263077 CTCACGTGGAGCATGTTAGAC 58.737 52.381 17.00 0.00 36.69 2.59
665 672 7.361201 GCATGTTAGACTGCAGATTTTGTCTTA 60.361 37.037 23.35 3.28 39.94 2.10
671 678 4.669318 CTGCAGATTTTGTCTTATGCAGG 58.331 43.478 8.42 0.00 42.98 4.85
697 704 6.048509 GCTTTGGGGTGTATGGAAATAATTG 58.951 40.000 0.00 0.00 0.00 2.32
927 970 8.236586 CACCAGAAATCTTGAAAATCAATACGA 58.763 33.333 0.00 0.00 35.59 3.43
928 971 8.237267 ACCAGAAATCTTGAAAATCAATACGAC 58.763 33.333 0.00 0.00 35.59 4.34
929 972 7.426456 CCAGAAATCTTGAAAATCAATACGACG 59.574 37.037 0.00 0.00 35.59 5.12
931 974 8.169268 AGAAATCTTGAAAATCAATACGACGAC 58.831 33.333 0.00 0.00 35.59 4.34
932 975 6.961359 ATCTTGAAAATCAATACGACGACA 57.039 33.333 0.00 0.00 35.59 4.35
973 1017 2.502745 AGAATGGAGGATGGGGCTTTA 58.497 47.619 0.00 0.00 0.00 1.85
1060 1105 2.079158 CGCTTCATTCAGAGGCTTTGA 58.921 47.619 3.21 3.21 46.35 2.69
1122 1330 6.646653 GATGCAATCGAGTAATTATGGAGACA 59.353 38.462 0.00 0.00 38.24 3.41
1189 1402 1.174783 GTCGACTCTGGGAGCTGTTA 58.825 55.000 8.70 0.00 32.04 2.41
1200 1413 4.264253 TGGGAGCTGTTATCAAAGACATG 58.736 43.478 0.00 0.00 0.00 3.21
1207 1420 6.712095 AGCTGTTATCAAAGACATGAAGTTCA 59.288 34.615 8.27 8.27 32.06 3.18
1283 1668 7.709947 TGTAATATAGTAGCGCACTGTTTAGT 58.290 34.615 11.47 7.23 38.24 2.24
1366 1751 8.440059 CAGATTTTGTAAATGACGTTGTAGCTA 58.560 33.333 0.00 0.00 0.00 3.32
1369 1754 7.949903 TTTGTAAATGACGTTGTAGCTAGAA 57.050 32.000 0.00 0.00 0.00 2.10
1374 1759 9.512435 GTAAATGACGTTGTAGCTAGAAATCTA 57.488 33.333 4.66 0.00 0.00 1.98
1377 1762 7.569639 TGACGTTGTAGCTAGAAATCTATCT 57.430 36.000 4.66 0.12 0.00 1.98
1378 1763 7.418408 TGACGTTGTAGCTAGAAATCTATCTG 58.582 38.462 4.66 0.00 0.00 2.90
1379 1764 7.067129 TGACGTTGTAGCTAGAAATCTATCTGT 59.933 37.037 4.66 0.00 0.00 3.41
1380 1765 7.773149 ACGTTGTAGCTAGAAATCTATCTGTT 58.227 34.615 4.66 0.00 0.00 3.16
1381 1766 7.916450 ACGTTGTAGCTAGAAATCTATCTGTTC 59.084 37.037 4.66 0.00 0.00 3.18
1382 1767 7.112287 CGTTGTAGCTAGAAATCTATCTGTTCG 59.888 40.741 4.66 0.00 0.00 3.95
1383 1768 6.439599 TGTAGCTAGAAATCTATCTGTTCGC 58.560 40.000 0.00 0.00 0.00 4.70
1384 1769 5.521906 AGCTAGAAATCTATCTGTTCGCA 57.478 39.130 0.00 0.00 0.00 5.10
1385 1770 5.907207 AGCTAGAAATCTATCTGTTCGCAA 58.093 37.500 0.00 0.00 0.00 4.85
1386 1771 6.341316 AGCTAGAAATCTATCTGTTCGCAAA 58.659 36.000 0.00 0.00 0.00 3.68
1387 1772 6.818644 AGCTAGAAATCTATCTGTTCGCAAAA 59.181 34.615 0.00 0.00 0.00 2.44
1388 1773 7.334421 AGCTAGAAATCTATCTGTTCGCAAAAA 59.666 33.333 0.00 0.00 0.00 1.94
1449 1834 3.680490 TGGAATGCAATCGTGTTCCTTA 58.320 40.909 14.05 0.00 40.55 2.69
1450 1835 3.438781 TGGAATGCAATCGTGTTCCTTAC 59.561 43.478 14.05 0.00 40.55 2.34
1456 1841 5.038033 TGCAATCGTGTTCCTTACAAAAAC 58.962 37.500 0.00 0.00 38.80 2.43
1461 1846 8.436200 CAATCGTGTTCCTTACAAAAACAAAAA 58.564 29.630 0.00 0.00 38.80 1.94
1503 1909 4.022068 TGTTCTCAAATGGCTCAAATCACC 60.022 41.667 0.00 0.00 0.00 4.02
1526 1932 1.508545 CTCGCTCGTCATGTGTCCT 59.491 57.895 0.00 0.00 0.00 3.85
1528 1934 1.517257 CGCTCGTCATGTGTCCTCC 60.517 63.158 0.00 0.00 0.00 4.30
1632 2038 4.101790 CCGCATGTTGGGCACGAC 62.102 66.667 0.00 0.00 0.00 4.34
1644 2050 0.035739 GGCACGACCCTTTTAGTCCA 59.964 55.000 0.00 0.00 0.00 4.02
1650 2056 2.685100 GACCCTTTTAGTCCAGTGTCG 58.315 52.381 0.00 0.00 0.00 4.35
1655 2061 2.162338 TTTAGTCCAGTGTCGGGCCG 62.162 60.000 22.51 22.51 0.00 6.13
1672 2078 1.154672 CGGACACGCGTGTTCATTG 60.155 57.895 40.82 25.99 45.05 2.82
1683 2089 4.337177 TTCATTGGCCGGTCCGCA 62.337 61.111 2.12 0.00 37.80 5.69
1696 2102 2.586079 CCGCATAGCACGACCCAG 60.586 66.667 0.00 0.00 0.00 4.45
1700 2106 0.391130 GCATAGCACGACCCAGTTGA 60.391 55.000 0.00 0.00 0.00 3.18
1701 2107 1.359848 CATAGCACGACCCAGTTGAC 58.640 55.000 0.00 0.00 0.00 3.18
1709 2115 1.071071 CGACCCAGTTGACCAGGTTTA 59.929 52.381 0.00 0.00 31.10 2.01
1724 2130 7.725397 TGACCAGGTTTAACTACACTAGAGTAA 59.275 37.037 0.00 0.00 0.00 2.24
1775 2182 0.582005 GACACACACCGACTCAAAGC 59.418 55.000 0.00 0.00 0.00 3.51
1777 2184 0.583438 CACACACCGACTCAAAGCTG 59.417 55.000 0.00 0.00 0.00 4.24
1784 2191 0.883833 CGACTCAAAGCTGGCCAAAT 59.116 50.000 7.01 0.00 0.00 2.32
1813 2220 1.823899 GGCCCGGTCCATCACAATC 60.824 63.158 0.00 0.00 0.00 2.67
1815 2222 2.180204 CCCGGTCCATCACAATCGC 61.180 63.158 0.00 0.00 0.00 4.58
1858 2265 1.343465 AGGGCACGATTATTAGACGGG 59.657 52.381 0.00 0.00 0.00 5.28
1898 2305 3.970410 CAGCACTCCCTGGCCCAA 61.970 66.667 0.00 0.00 0.00 4.12
1922 2329 2.164422 ACGACCTAGTTAGTAAACGGGC 59.836 50.000 0.00 0.00 40.73 6.13
1926 2333 4.604156 ACCTAGTTAGTAAACGGGCTAGT 58.396 43.478 0.00 0.00 40.73 2.57
1939 2346 2.092882 GCTAGTCGGTGGCACGTTC 61.093 63.158 12.17 4.09 31.47 3.95
1948 2355 4.947147 GGCACGTTCAGCACCCCA 62.947 66.667 0.00 0.00 0.00 4.96
1951 2358 3.168528 ACGTTCAGCACCCCAGGT 61.169 61.111 0.00 0.00 35.62 4.00
1953 2360 2.358737 GTTCAGCACCCCAGGTCG 60.359 66.667 0.00 0.00 31.02 4.79
1962 2369 1.676006 CACCCCAGGTCGCATATTTTC 59.324 52.381 0.00 0.00 31.02 2.29
2091 2498 2.457080 CGCTCCCGGAAAGAGAAAC 58.543 57.895 0.73 0.00 32.86 2.78
2137 2544 1.303806 TTCGCTACCTTTTGCCCCC 60.304 57.895 0.00 0.00 0.00 5.40
2189 2596 3.496870 GCAAAACCCTCTCCTCTTTCTCA 60.497 47.826 0.00 0.00 0.00 3.27
2225 2632 2.123597 TAGGGCGGCGGATACAGT 60.124 61.111 9.78 0.00 0.00 3.55
2245 2652 4.796231 CGTCACCGGGAAGAGGCG 62.796 72.222 6.32 0.00 0.00 5.52
2246 2653 4.452733 GTCACCGGGAAGAGGCGG 62.453 72.222 6.32 0.00 0.00 6.13
2298 2705 1.138036 CGGCCAAGATCACGACGTA 59.862 57.895 2.24 0.00 0.00 3.57
2321 2728 1.082756 GACAGCGGCACAAAACTCG 60.083 57.895 1.45 0.00 0.00 4.18
2322 2729 1.495584 GACAGCGGCACAAAACTCGA 61.496 55.000 1.45 0.00 0.00 4.04
2407 2814 2.717639 AGAGGTCTGCTCTCTCTCTC 57.282 55.000 0.00 0.00 36.99 3.20
2408 2815 2.200081 AGAGGTCTGCTCTCTCTCTCT 58.800 52.381 0.00 0.00 36.99 3.10
2409 2816 2.171448 AGAGGTCTGCTCTCTCTCTCTC 59.829 54.545 0.00 0.00 36.99 3.20
2410 2817 2.171448 GAGGTCTGCTCTCTCTCTCTCT 59.829 54.545 0.00 0.00 0.00 3.10
2411 2818 2.171448 AGGTCTGCTCTCTCTCTCTCTC 59.829 54.545 0.00 0.00 0.00 3.20
2412 2819 2.171448 GGTCTGCTCTCTCTCTCTCTCT 59.829 54.545 0.00 0.00 0.00 3.10
2413 2820 3.462021 GTCTGCTCTCTCTCTCTCTCTC 58.538 54.545 0.00 0.00 0.00 3.20
2414 2821 3.133721 GTCTGCTCTCTCTCTCTCTCTCT 59.866 52.174 0.00 0.00 0.00 3.10
2415 2822 3.386078 TCTGCTCTCTCTCTCTCTCTCTC 59.614 52.174 0.00 0.00 0.00 3.20
2416 2823 3.378512 TGCTCTCTCTCTCTCTCTCTCT 58.621 50.000 0.00 0.00 0.00 3.10
2417 2824 3.386078 TGCTCTCTCTCTCTCTCTCTCTC 59.614 52.174 0.00 0.00 0.00 3.20
2418 2825 3.640967 GCTCTCTCTCTCTCTCTCTCTCT 59.359 52.174 0.00 0.00 0.00 3.10
2419 2826 4.261994 GCTCTCTCTCTCTCTCTCTCTCTC 60.262 54.167 0.00 0.00 0.00 3.20
2420 2827 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
2421 2828 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2422 2829 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2423 2830 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2424 2831 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2425 2832 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2426 2833 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2427 2834 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2428 2835 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2429 2836 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2430 2837 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2431 2838 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2432 2839 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2433 2840 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2434 2841 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2435 2842 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2436 2843 4.219115 TCTCTCTCTCTCTCTCTCTCTCC 58.781 52.174 0.00 0.00 0.00 3.71
2493 3115 3.103911 GTGTCGTCTTCACCGCCG 61.104 66.667 0.00 0.00 0.00 6.46
2552 3174 3.570638 CAGCGGCGCAGATCTTGG 61.571 66.667 35.02 8.43 0.00 3.61
2633 3255 9.062524 GGAGGCAGGTTTATTTAATTTGTTTTT 57.937 29.630 0.00 0.00 0.00 1.94
2636 3258 9.800299 GGCAGGTTTATTTAATTTGTTTTTACG 57.200 29.630 0.00 0.00 0.00 3.18
2732 3354 5.039333 GCGAGGAATCAAATCAATTTCCAG 58.961 41.667 3.62 0.00 40.09 3.86
2740 3362 2.629017 ATCAATTTCCAGGCCCTGTT 57.371 45.000 10.47 0.00 0.00 3.16
2741 3363 2.397044 TCAATTTCCAGGCCCTGTTT 57.603 45.000 10.47 0.00 0.00 2.83
2874 3496 1.173913 AACCGAACAAGCCCTAATGC 58.826 50.000 0.00 0.00 0.00 3.56
2912 3534 6.421202 CACCCGTATCTTTTAAGCAGAGATAC 59.579 42.308 11.00 11.00 44.30 2.24
3025 3648 5.320549 TCAGGTTCGTATCTTTCTACCAC 57.679 43.478 0.00 0.00 0.00 4.16
3038 3661 0.944311 CTACCACGCTGTCGCAGTTT 60.944 55.000 8.32 0.00 39.84 2.66
3048 3671 1.815840 TCGCAGTTTTGTGCACGGA 60.816 52.632 13.13 0.00 44.21 4.69
3085 3708 9.356433 GAAGGTTAGAGAAGACTTGTACATTAC 57.644 37.037 0.00 0.00 0.00 1.89
3100 3723 7.643569 TGTACATTACGGTTGAGACCTTATA 57.356 36.000 0.00 0.00 44.20 0.98
3136 3759 6.076981 CAGCTTAAACTGTGACTGGATTTT 57.923 37.500 0.00 0.00 32.78 1.82
3172 3795 4.992951 GTGTAGATATGTGCATGCAGATGA 59.007 41.667 33.78 20.44 32.10 2.92
3184 3807 5.183522 TGCATGCAGATGAAACACTATGAAA 59.816 36.000 18.46 0.00 0.00 2.69
3261 3884 7.380536 ACAAAACATGCATACATCTCAATTGT 58.619 30.769 5.13 0.00 32.87 2.71
3312 3935 2.032981 CGCTCACCCTTGTGCTTTT 58.967 52.632 0.00 0.00 42.46 2.27
3389 4015 7.129457 AGATCTCAATTATTGTACTCCTGCA 57.871 36.000 4.77 0.00 0.00 4.41
3402 4028 6.894682 TGTACTCCTGCATATGGTTTTGATA 58.105 36.000 4.56 0.00 0.00 2.15
3435 4061 6.437162 TGCTCACCCTTATGCTTTTCTTTATT 59.563 34.615 0.00 0.00 0.00 1.40
3444 4070 9.852091 CTTATGCTTTTCTTTATTGAGCTCTTT 57.148 29.630 16.19 4.73 34.56 2.52
3505 4131 3.763097 TTCAATTGTTATGCTCCTGCG 57.237 42.857 5.13 0.00 43.34 5.18
3530 4156 4.517285 TGGCTTTGATAATCTGTGTCCTC 58.483 43.478 0.00 0.00 0.00 3.71
3531 4157 4.019411 TGGCTTTGATAATCTGTGTCCTCA 60.019 41.667 0.00 0.00 0.00 3.86
3540 4166 1.555075 TCTGTGTCCTCACCCTTATGC 59.445 52.381 0.00 0.00 43.26 3.14
3549 4175 5.944007 GTCCTCACCCTTATGCTTTTCTTTA 59.056 40.000 0.00 0.00 0.00 1.85
3558 4184 7.416777 CCCTTATGCTTTTCTTTATTGGACTCC 60.417 40.741 0.00 0.00 0.00 3.85
3608 4234 9.289303 GAACAGATATGTGAATTGCGTAATTTT 57.711 29.630 12.86 0.00 36.66 1.82
3663 4289 7.903431 CGGAACTTAAATACTTGCAGATGTAAC 59.097 37.037 0.00 0.00 0.00 2.50
3742 4370 5.895636 TTCACATGTTGTTCAGTGTTTCT 57.104 34.783 0.00 0.00 33.84 2.52
3773 4401 5.282510 AGCTGTAACATTCTACTGCGTATC 58.717 41.667 0.00 0.00 45.95 2.24
3808 4436 7.923344 TCTTTGTTTTGATTCGGCTTTCAATTA 59.077 29.630 0.00 0.00 32.27 1.40
3866 4494 4.847444 GAGAGGCGGAGGGCAAGC 62.847 72.222 0.00 0.00 46.16 4.01
3910 4538 4.712425 CGACCCGTCACCGTGTCC 62.712 72.222 0.00 0.00 38.09 4.02
3968 4596 1.032114 GCTCCCAATCCCTTCAACCG 61.032 60.000 0.00 0.00 0.00 4.44
4091 4719 2.159240 AGTTGAAGCTGATCGACGCATA 60.159 45.455 6.05 0.00 38.51 3.14
4097 4725 1.518929 GCTGATCGACGCATACACTTC 59.481 52.381 0.00 0.00 0.00 3.01
4147 4775 8.055279 TGGATGTTCTCTATTCAATGGTTTTC 57.945 34.615 0.00 0.00 0.00 2.29
4234 4863 2.103941 TGCATCTGTCACACTGTAACCA 59.896 45.455 0.00 0.00 0.00 3.67
4315 4947 5.992217 GTCCACTTTACTTGAGATCTGTGTT 59.008 40.000 0.00 0.00 0.00 3.32
4319 4951 5.237344 ACTTTACTTGAGATCTGTGTTGTGC 59.763 40.000 0.00 0.00 0.00 4.57
4332 4964 3.067040 TGTGTTGTGCGTAGAGTGTTAGA 59.933 43.478 0.00 0.00 0.00 2.10
4348 4980 5.310857 AGTGTTAGAAGAGTTCAGGGGAATT 59.689 40.000 0.00 0.00 35.05 2.17
4359 4991 7.563556 AGAGTTCAGGGGAATTTCTGTTTTTAA 59.436 33.333 0.00 0.00 35.05 1.52
4398 5030 1.148310 CAACAGTGCCTCTAACGGTG 58.852 55.000 0.00 0.00 0.00 4.94
4416 5048 3.502211 CGGTGCTCCTTTTTATGTTCACT 59.498 43.478 2.85 0.00 0.00 3.41
4425 5057 5.239963 CCTTTTTATGTTCACTTGTACCCGT 59.760 40.000 0.00 0.00 0.00 5.28
4439 5071 0.891373 ACCCGTCATGTGAGTGAGAG 59.109 55.000 0.00 0.00 0.00 3.20
4440 5072 1.177401 CCCGTCATGTGAGTGAGAGA 58.823 55.000 0.00 0.00 0.00 3.10
4450 5082 2.036475 GTGAGTGAGAGAGGCTGTGAAA 59.964 50.000 0.00 0.00 0.00 2.69
4466 5098 1.072331 TGAAAGGGAGAGTGAACCAGC 59.928 52.381 0.00 0.00 0.00 4.85
4471 5103 1.251527 GGAGAGTGAACCAGCGAGGA 61.252 60.000 5.19 0.00 41.22 3.71
4481 5113 0.671251 CCAGCGAGGATGTCTACTCC 59.329 60.000 0.00 0.00 41.22 3.85
4485 5117 0.309302 CGAGGATGTCTACTCCGCTG 59.691 60.000 0.00 0.00 37.88 5.18
4593 5225 7.276218 ACTTTATGAATCAACATTTGGCATTCG 59.724 33.333 0.00 0.00 30.60 3.34
4667 5299 1.745320 ATAGACCCTTACCAGCCGCG 61.745 60.000 0.00 0.00 0.00 6.46
4736 5368 1.011968 TTTCGCCGTTCACTCGATGG 61.012 55.000 0.00 0.00 31.96 3.51
4776 5408 7.981789 TGGTATAGATTCAGTGATCAACAAGTC 59.018 37.037 0.00 0.00 0.00 3.01
4829 5461 5.462530 TTCACTTCCAACTATTCTCGTGA 57.537 39.130 0.00 0.00 0.00 4.35
4834 5466 4.920640 TCCAACTATTCTCGTGATCCTC 57.079 45.455 0.00 0.00 0.00 3.71
4860 5492 7.472543 GCAGGTATGGTTAATCAGTAAAACAG 58.527 38.462 0.00 0.00 0.00 3.16
5038 5677 0.723414 CTGCACATTGCTACAGTCCG 59.277 55.000 0.00 0.00 45.31 4.79
5163 5802 1.541118 TTGCCTGGGGAGATGTGGA 60.541 57.895 0.00 0.00 0.00 4.02
5193 5832 0.729116 CTCGTGGCATGTGGATTGTC 59.271 55.000 6.60 0.00 0.00 3.18
5194 5833 0.036022 TCGTGGCATGTGGATTGTCA 59.964 50.000 6.60 0.00 0.00 3.58
5208 5847 5.705441 GTGGATTGTCAGTTTATCCTTGACA 59.295 40.000 2.68 2.68 46.71 3.58
5219 5858 1.153289 CCTTGACATGAGGAGGCGG 60.153 63.158 0.00 0.00 36.33 6.13
5257 5896 3.071874 TCACTGGGAAAGCCATGTTAG 57.928 47.619 0.00 0.00 35.15 2.34
5263 5902 2.026262 GGGAAAGCCATGTTAGTGAGGA 60.026 50.000 0.00 0.00 35.15 3.71
5267 5906 4.574674 AAGCCATGTTAGTGAGGATGAA 57.425 40.909 0.00 0.00 0.00 2.57
5327 5966 6.820656 GTGTCATCATCTACATTCCAGAGTTT 59.179 38.462 0.00 0.00 0.00 2.66
5349 5988 1.153628 ACTTCTGATACACGGCGGC 60.154 57.895 13.24 0.00 0.00 6.53
5373 6012 0.679960 TCGACGGCAGGAGAATGAGA 60.680 55.000 0.00 0.00 0.00 3.27
5404 6043 0.328258 CAGGATCCAGGTTTTCCCGT 59.672 55.000 15.82 0.00 41.86 5.28
5426 6065 2.290514 TGCAGATGCTTAGAGCCTGTTT 60.291 45.455 6.35 0.00 41.51 2.83
5428 6067 3.603532 CAGATGCTTAGAGCCTGTTTGA 58.396 45.455 0.00 0.00 41.51 2.69
5462 6101 2.894387 GAGCGGCCAGAGCATCAC 60.894 66.667 2.24 0.00 42.56 3.06
5464 6103 4.783621 GCGGCCAGAGCATCACCA 62.784 66.667 2.24 0.00 42.56 4.17
5470 6109 1.068055 GCCAGAGCATCACCAAACAAG 60.068 52.381 0.00 0.00 37.82 3.16
5499 6138 2.184579 CTTTCCTCGTCCCGGAGC 59.815 66.667 0.73 0.00 32.57 4.70
5529 6168 1.260544 GCAGGCCATTTTCTTGGAGT 58.739 50.000 5.01 0.00 39.25 3.85
5534 6173 1.549950 GCCATTTTCTTGGAGTCCCCA 60.550 52.381 6.74 0.00 44.93 4.96
5542 6181 1.752198 TGGAGTCCCCAAAGTGTCG 59.248 57.895 6.74 0.00 43.29 4.35
5543 6182 1.671379 GGAGTCCCCAAAGTGTCGC 60.671 63.158 0.00 0.00 34.14 5.19
5544 6183 1.371558 GAGTCCCCAAAGTGTCGCT 59.628 57.895 0.00 0.00 0.00 4.93
5545 6184 0.670854 GAGTCCCCAAAGTGTCGCTC 60.671 60.000 0.00 0.00 0.00 5.03
5546 6185 1.671379 GTCCCCAAAGTGTCGCTCC 60.671 63.158 0.00 0.00 0.00 4.70
5547 6186 2.144078 TCCCCAAAGTGTCGCTCCA 61.144 57.895 0.00 0.00 0.00 3.86
5548 6187 1.002134 CCCCAAAGTGTCGCTCCAT 60.002 57.895 0.00 0.00 0.00 3.41
5549 6188 1.308069 CCCCAAAGTGTCGCTCCATG 61.308 60.000 0.00 0.00 0.00 3.66
5550 6189 1.503542 CCAAAGTGTCGCTCCATGC 59.496 57.895 0.00 0.00 38.57 4.06
5600 6239 1.997669 CCGAACAGGCTCTTAGTGTC 58.002 55.000 0.00 0.00 0.00 3.67
5601 6240 1.272490 CCGAACAGGCTCTTAGTGTCA 59.728 52.381 0.00 0.00 0.00 3.58
5602 6241 2.093973 CCGAACAGGCTCTTAGTGTCAT 60.094 50.000 0.00 0.00 0.00 3.06
5603 6242 3.130516 CCGAACAGGCTCTTAGTGTCATA 59.869 47.826 0.00 0.00 0.00 2.15
5604 6243 4.202161 CCGAACAGGCTCTTAGTGTCATAT 60.202 45.833 0.00 0.00 0.00 1.78
5605 6244 4.979197 CGAACAGGCTCTTAGTGTCATATC 59.021 45.833 0.00 0.00 0.00 1.63
5606 6245 5.450550 CGAACAGGCTCTTAGTGTCATATCA 60.451 44.000 0.00 0.00 0.00 2.15
5607 6246 5.939764 ACAGGCTCTTAGTGTCATATCAA 57.060 39.130 0.00 0.00 0.00 2.57
5608 6247 5.911752 ACAGGCTCTTAGTGTCATATCAAG 58.088 41.667 0.00 0.00 0.00 3.02
5609 6248 4.749099 CAGGCTCTTAGTGTCATATCAAGC 59.251 45.833 0.00 0.00 0.00 4.01
5610 6249 4.653341 AGGCTCTTAGTGTCATATCAAGCT 59.347 41.667 0.00 0.00 0.00 3.74
5611 6250 4.749099 GGCTCTTAGTGTCATATCAAGCTG 59.251 45.833 0.00 0.00 0.00 4.24
5612 6251 5.355596 GCTCTTAGTGTCATATCAAGCTGT 58.644 41.667 0.00 0.00 0.00 4.40
5613 6252 5.814705 GCTCTTAGTGTCATATCAAGCTGTT 59.185 40.000 0.00 0.00 0.00 3.16
5614 6253 6.019156 GCTCTTAGTGTCATATCAAGCTGTTC 60.019 42.308 0.00 0.00 0.00 3.18
5615 6254 6.341316 TCTTAGTGTCATATCAAGCTGTTCC 58.659 40.000 0.00 0.00 0.00 3.62
5616 6255 4.558226 AGTGTCATATCAAGCTGTTCCA 57.442 40.909 0.00 0.00 0.00 3.53
5617 6256 4.910195 AGTGTCATATCAAGCTGTTCCAA 58.090 39.130 0.00 0.00 0.00 3.53
5618 6257 4.940046 AGTGTCATATCAAGCTGTTCCAAG 59.060 41.667 0.00 0.00 0.00 3.61
5619 6258 4.697352 GTGTCATATCAAGCTGTTCCAAGT 59.303 41.667 0.00 0.00 0.00 3.16
5620 6259 4.937620 TGTCATATCAAGCTGTTCCAAGTC 59.062 41.667 0.00 0.00 0.00 3.01
5621 6260 4.333926 GTCATATCAAGCTGTTCCAAGTCC 59.666 45.833 0.00 0.00 0.00 3.85
5622 6261 4.225942 TCATATCAAGCTGTTCCAAGTCCT 59.774 41.667 0.00 0.00 0.00 3.85
5623 6262 3.515602 ATCAAGCTGTTCCAAGTCCTT 57.484 42.857 0.00 0.00 0.00 3.36
5624 6263 2.575532 TCAAGCTGTTCCAAGTCCTTG 58.424 47.619 0.00 0.00 40.13 3.61
5625 6264 2.172505 TCAAGCTGTTCCAAGTCCTTGA 59.827 45.455 8.59 0.00 42.93 3.02
5626 6265 3.152341 CAAGCTGTTCCAAGTCCTTGAT 58.848 45.455 8.59 0.00 42.93 2.57
5627 6266 4.041567 TCAAGCTGTTCCAAGTCCTTGATA 59.958 41.667 8.59 0.00 42.93 2.15
5628 6267 4.851639 AGCTGTTCCAAGTCCTTGATAT 57.148 40.909 8.59 0.00 42.93 1.63
5629 6268 4.775236 AGCTGTTCCAAGTCCTTGATATC 58.225 43.478 8.59 0.00 42.93 1.63
5630 6269 4.225942 AGCTGTTCCAAGTCCTTGATATCA 59.774 41.667 8.59 0.00 42.93 2.15
5631 6270 4.943705 GCTGTTCCAAGTCCTTGATATCAA 59.056 41.667 17.07 17.07 42.93 2.57
5643 6282 4.521146 CTTGATATCAAGCTGTTCCAGGT 58.479 43.478 27.87 0.00 45.59 4.00
5644 6283 4.142609 TGATATCAAGCTGTTCCAGGTC 57.857 45.455 1.98 0.00 41.59 3.85
5645 6284 3.118261 TGATATCAAGCTGTTCCAGGTCC 60.118 47.826 1.98 0.00 41.59 4.46
5646 6285 1.366319 ATCAAGCTGTTCCAGGTCCT 58.634 50.000 0.00 0.00 41.59 3.85
5647 6286 0.687354 TCAAGCTGTTCCAGGTCCTC 59.313 55.000 0.00 0.00 41.59 3.71
5648 6287 0.671781 CAAGCTGTTCCAGGTCCTCG 60.672 60.000 0.00 0.00 41.59 4.63
5649 6288 0.832135 AAGCTGTTCCAGGTCCTCGA 60.832 55.000 0.00 0.00 41.59 4.04
5650 6289 1.216710 GCTGTTCCAGGTCCTCGAG 59.783 63.158 5.13 5.13 31.21 4.04
5651 6290 1.893786 CTGTTCCAGGTCCTCGAGG 59.106 63.158 26.32 26.32 0.00 4.63
5652 6291 1.608717 CTGTTCCAGGTCCTCGAGGG 61.609 65.000 30.80 14.70 35.41 4.30
5653 6292 1.305046 GTTCCAGGTCCTCGAGGGA 60.305 63.158 30.80 16.87 42.77 4.20
5654 6293 1.000486 TTCCAGGTCCTCGAGGGAG 60.000 63.158 30.80 17.14 46.10 4.30
5665 6304 2.959030 CCTCGAGGGAGTGTCATATCAA 59.041 50.000 24.62 0.00 38.70 2.57
5698 6337 1.271271 CCTTGAGGGCTATGCTGATCC 60.271 57.143 0.00 0.00 0.00 3.36
5702 6341 1.206849 GAGGGCTATGCTGATCCTAGC 59.793 57.143 0.00 0.00 43.95 3.42
5704 6343 0.739112 GGCTATGCTGATCCTAGCGC 60.739 60.000 0.00 0.00 46.61 5.92
5727 6366 4.065321 AGCACTGCTGCCTATAAGTAAG 57.935 45.455 1.67 0.00 45.53 2.34
5809 6448 2.359900 GTGACATCTTTGTGCTAGGGG 58.640 52.381 0.00 0.00 35.79 4.79
5810 6449 1.985159 TGACATCTTTGTGCTAGGGGT 59.015 47.619 0.00 0.00 35.79 4.95
5821 6460 5.546621 TGTGCTAGGGGTATTATGTCTTC 57.453 43.478 0.00 0.00 0.00 2.87
5824 6463 4.040461 TGCTAGGGGTATTATGTCTTCTGC 59.960 45.833 0.00 0.00 0.00 4.26
5866 6505 1.293924 GCGTCTGGTCTTGATGATGG 58.706 55.000 0.00 0.00 0.00 3.51
5867 6506 1.134699 GCGTCTGGTCTTGATGATGGA 60.135 52.381 0.00 0.00 0.00 3.41
5868 6507 2.677902 GCGTCTGGTCTTGATGATGGAA 60.678 50.000 0.00 0.00 0.00 3.53
5869 6508 3.193263 CGTCTGGTCTTGATGATGGAAG 58.807 50.000 0.00 0.00 0.00 3.46
5870 6509 3.118992 CGTCTGGTCTTGATGATGGAAGA 60.119 47.826 0.00 0.00 0.00 2.87
5871 6510 4.442612 CGTCTGGTCTTGATGATGGAAGAT 60.443 45.833 0.00 0.00 31.05 2.40
5872 6511 4.815308 GTCTGGTCTTGATGATGGAAGATG 59.185 45.833 0.00 0.00 31.05 2.90
5873 6512 4.718276 TCTGGTCTTGATGATGGAAGATGA 59.282 41.667 0.00 0.00 31.05 2.92
5874 6513 5.368816 TCTGGTCTTGATGATGGAAGATGAT 59.631 40.000 0.00 0.00 31.05 2.45
5875 6514 5.374071 TGGTCTTGATGATGGAAGATGATG 58.626 41.667 0.00 0.00 31.05 3.07
5876 6515 4.760715 GGTCTTGATGATGGAAGATGATGG 59.239 45.833 0.00 0.00 31.05 3.51
5893 6532 5.110814 TGATGGAACGTTTGGGATATTCT 57.889 39.130 0.46 0.00 0.00 2.40
5918 6557 4.025396 CGCTTAATCCACTTGCAGTATCTG 60.025 45.833 0.00 0.00 34.12 2.90
5923 6562 9.935241 CTTAATCCACTTGCAGTATCTGTATAT 57.065 33.333 0.00 0.00 33.43 0.86
5948 6587 9.887629 ATATCTGTAAATAAGCTGGAGATGATG 57.112 33.333 0.00 0.00 0.00 3.07
5953 6592 5.579753 AATAAGCTGGAGATGATGTCCAT 57.420 39.130 12.07 0.04 43.33 3.41
5963 6602 5.431765 GAGATGATGTCCATACAAACACCT 58.568 41.667 0.00 0.00 39.58 4.00
5967 6606 7.554118 AGATGATGTCCATACAAACACCTTTAG 59.446 37.037 0.00 0.00 39.58 1.85
5981 6620 3.406764 ACCTTTAGTGAGAAGCTTGCAG 58.593 45.455 2.10 0.00 0.00 4.41
5982 6621 2.161211 CCTTTAGTGAGAAGCTTGCAGC 59.839 50.000 2.10 0.47 42.84 5.25
6026 6665 9.787532 ATTGTTATTGTGATTGTTATCCTTTCG 57.212 29.630 0.00 0.00 0.00 3.46
6081 6720 4.345859 TGAGTTATGACCAAACCGAACT 57.654 40.909 0.00 0.00 0.00 3.01
6082 6721 5.471556 TGAGTTATGACCAAACCGAACTA 57.528 39.130 0.00 0.00 0.00 2.24
6098 6737 6.640518 ACCGAACTAGAGAAATATTGCTGAA 58.359 36.000 0.00 0.00 0.00 3.02
6103 6742 7.763172 ACTAGAGAAATATTGCTGAACTTCG 57.237 36.000 0.00 0.00 0.00 3.79
6126 6765 7.491682 TCGTTATAAACTACAGTTGATACCCC 58.508 38.462 0.00 0.00 38.44 4.95
6131 6770 1.324740 TACAGTTGATACCCCGCGCT 61.325 55.000 5.56 0.00 0.00 5.92
6215 6867 1.813513 ACGTGGATGCAAAAGGAGAG 58.186 50.000 0.00 0.00 0.00 3.20
6274 6926 5.008613 ACTGTTCATATTGTCACGCTTGTTT 59.991 36.000 0.00 0.00 0.00 2.83
6285 6937 1.476488 ACGCTTGTTTGGTCAAAGCTT 59.524 42.857 0.00 0.00 0.00 3.74
6287 6939 3.243068 ACGCTTGTTTGGTCAAAGCTTAG 60.243 43.478 0.00 0.00 0.00 2.18
6295 6947 4.561735 TGGTCAAAGCTTAGGAAAAACG 57.438 40.909 0.00 0.00 0.00 3.60
6302 6954 6.915843 TCAAAGCTTAGGAAAAACGATTGTTC 59.084 34.615 0.00 0.00 37.31 3.18
6330 6982 1.604593 AGGCGATGGCTTGCTTGTT 60.605 52.632 0.00 0.00 39.81 2.83
6394 7056 2.961526 TTTCTAGCTAAGAGGTGGCG 57.038 50.000 0.00 0.00 35.05 5.69
6395 7057 0.460311 TTCTAGCTAAGAGGTGGCGC 59.540 55.000 0.00 0.00 35.05 6.53
6396 7058 1.068250 CTAGCTAAGAGGTGGCGCC 59.932 63.158 22.73 22.73 37.58 6.53
6412 7074 2.438434 CCTCCGGCGCCTTTCATT 60.438 61.111 26.68 0.00 0.00 2.57
6413 7075 2.764314 CCTCCGGCGCCTTTCATTG 61.764 63.158 26.68 6.56 0.00 2.82
6414 7076 1.745115 CTCCGGCGCCTTTCATTGA 60.745 57.895 26.68 8.13 0.00 2.57
6415 7077 1.077787 TCCGGCGCCTTTCATTGAT 60.078 52.632 26.68 0.00 0.00 2.57
6416 7078 1.095228 TCCGGCGCCTTTCATTGATC 61.095 55.000 26.68 0.00 0.00 2.92
6417 7079 1.097547 CCGGCGCCTTTCATTGATCT 61.098 55.000 26.68 0.00 0.00 2.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.678950 TGCAAAACTTTGGGCCTAGC 59.321 50.000 4.53 0.00 38.57 3.42
2 3 2.827921 AGATGCAAAACTTTGGGCCTAG 59.172 45.455 4.53 4.77 38.57 3.02
3 4 2.825532 GAGATGCAAAACTTTGGGCCTA 59.174 45.455 4.53 0.00 38.57 3.93
4 5 1.620323 GAGATGCAAAACTTTGGGCCT 59.380 47.619 4.53 0.00 38.57 5.19
5 6 1.620323 AGAGATGCAAAACTTTGGGCC 59.380 47.619 0.00 0.00 38.57 5.80
6 7 3.391506 AAGAGATGCAAAACTTTGGGC 57.608 42.857 4.45 0.00 38.57 5.36
7 8 5.221224 TGTGTAAGAGATGCAAAACTTTGGG 60.221 40.000 4.45 0.00 38.57 4.12
8 9 5.830912 TGTGTAAGAGATGCAAAACTTTGG 58.169 37.500 4.45 0.00 38.57 3.28
9 10 7.113965 GTCATGTGTAAGAGATGCAAAACTTTG 59.886 37.037 0.00 0.00 41.03 2.77
10 11 7.141363 GTCATGTGTAAGAGATGCAAAACTTT 58.859 34.615 0.00 0.00 0.00 2.66
11 12 6.566564 CGTCATGTGTAAGAGATGCAAAACTT 60.567 38.462 0.00 0.00 0.00 2.66
12 13 5.106948 CGTCATGTGTAAGAGATGCAAAACT 60.107 40.000 0.00 0.00 0.00 2.66
13 14 5.082059 CGTCATGTGTAAGAGATGCAAAAC 58.918 41.667 0.00 0.00 0.00 2.43
14 15 4.754618 ACGTCATGTGTAAGAGATGCAAAA 59.245 37.500 0.00 0.00 0.00 2.44
15 16 4.314961 ACGTCATGTGTAAGAGATGCAAA 58.685 39.130 0.00 0.00 0.00 3.68
16 17 3.925379 ACGTCATGTGTAAGAGATGCAA 58.075 40.909 0.00 0.00 0.00 4.08
17 18 3.592898 ACGTCATGTGTAAGAGATGCA 57.407 42.857 0.00 0.00 0.00 3.96
18 19 4.673441 ACTACGTCATGTGTAAGAGATGC 58.327 43.478 0.00 0.00 0.00 3.91
19 20 8.775527 AGTATACTACGTCATGTGTAAGAGATG 58.224 37.037 2.75 0.00 0.00 2.90
20 21 8.905660 AGTATACTACGTCATGTGTAAGAGAT 57.094 34.615 2.75 0.00 0.00 2.75
21 22 9.473640 CTAGTATACTACGTCATGTGTAAGAGA 57.526 37.037 8.59 0.00 0.00 3.10
22 23 9.473640 TCTAGTATACTACGTCATGTGTAAGAG 57.526 37.037 8.59 0.00 0.00 2.85
23 24 9.822185 TTCTAGTATACTACGTCATGTGTAAGA 57.178 33.333 8.59 0.00 0.00 2.10
26 27 8.996271 CCATTCTAGTATACTACGTCATGTGTA 58.004 37.037 8.59 0.00 0.00 2.90
27 28 7.040617 CCCATTCTAGTATACTACGTCATGTGT 60.041 40.741 8.59 0.00 0.00 3.72
28 29 7.040617 ACCCATTCTAGTATACTACGTCATGTG 60.041 40.741 8.59 3.54 0.00 3.21
29 30 7.002879 ACCCATTCTAGTATACTACGTCATGT 58.997 38.462 8.59 0.95 0.00 3.21
30 31 7.450124 ACCCATTCTAGTATACTACGTCATG 57.550 40.000 8.59 8.20 0.00 3.07
31 32 9.750783 ATTACCCATTCTAGTATACTACGTCAT 57.249 33.333 8.59 0.00 0.00 3.06
32 33 9.224267 GATTACCCATTCTAGTATACTACGTCA 57.776 37.037 8.59 0.00 0.00 4.35
33 34 9.224267 TGATTACCCATTCTAGTATACTACGTC 57.776 37.037 8.59 0.00 0.00 4.34
34 35 9.750783 ATGATTACCCATTCTAGTATACTACGT 57.249 33.333 8.59 0.00 0.00 3.57
36 37 9.804758 GCATGATTACCCATTCTAGTATACTAC 57.195 37.037 8.59 0.00 0.00 2.73
37 38 9.769677 AGCATGATTACCCATTCTAGTATACTA 57.230 33.333 12.05 12.05 0.00 1.82
38 39 8.671987 AGCATGATTACCCATTCTAGTATACT 57.328 34.615 10.87 10.87 0.00 2.12
39 40 8.531982 TGAGCATGATTACCCATTCTAGTATAC 58.468 37.037 0.00 0.00 0.00 1.47
40 41 8.664669 TGAGCATGATTACCCATTCTAGTATA 57.335 34.615 0.00 0.00 0.00 1.47
41 42 7.559335 TGAGCATGATTACCCATTCTAGTAT 57.441 36.000 0.00 0.00 0.00 2.12
42 43 6.994421 TGAGCATGATTACCCATTCTAGTA 57.006 37.500 0.00 0.00 0.00 1.82
43 44 5.894298 TGAGCATGATTACCCATTCTAGT 57.106 39.130 0.00 0.00 0.00 2.57
44 45 6.528321 TCTTGAGCATGATTACCCATTCTAG 58.472 40.000 0.00 0.00 0.00 2.43
45 46 6.499106 TCTTGAGCATGATTACCCATTCTA 57.501 37.500 0.00 0.00 0.00 2.10
46 47 5.378230 TCTTGAGCATGATTACCCATTCT 57.622 39.130 0.00 0.00 0.00 2.40
47 48 5.009410 CCTTCTTGAGCATGATTACCCATTC 59.991 44.000 0.00 0.00 0.00 2.67
48 49 4.891756 CCTTCTTGAGCATGATTACCCATT 59.108 41.667 0.00 0.00 0.00 3.16
49 50 4.467769 CCTTCTTGAGCATGATTACCCAT 58.532 43.478 0.00 0.00 0.00 4.00
50 51 3.371917 CCCTTCTTGAGCATGATTACCCA 60.372 47.826 0.00 0.00 0.00 4.51
51 52 3.217626 CCCTTCTTGAGCATGATTACCC 58.782 50.000 0.00 0.00 0.00 3.69
52 53 2.620585 GCCCTTCTTGAGCATGATTACC 59.379 50.000 0.00 0.00 0.00 2.85
53 54 3.282021 TGCCCTTCTTGAGCATGATTAC 58.718 45.455 0.00 0.00 0.00 1.89
54 55 3.650281 TGCCCTTCTTGAGCATGATTA 57.350 42.857 0.00 0.00 0.00 1.75
55 56 2.519771 TGCCCTTCTTGAGCATGATT 57.480 45.000 0.00 0.00 0.00 2.57
56 57 2.519771 TTGCCCTTCTTGAGCATGAT 57.480 45.000 0.00 0.00 36.20 2.45
57 58 2.519771 ATTGCCCTTCTTGAGCATGA 57.480 45.000 0.00 0.00 36.20 3.07
58 59 3.444742 TGTTATTGCCCTTCTTGAGCATG 59.555 43.478 0.00 0.00 36.20 4.06
59 60 3.700538 TGTTATTGCCCTTCTTGAGCAT 58.299 40.909 0.00 0.00 36.20 3.79
60 61 3.153369 TGTTATTGCCCTTCTTGAGCA 57.847 42.857 0.00 0.00 33.97 4.26
61 62 4.158394 TCAATGTTATTGCCCTTCTTGAGC 59.842 41.667 0.00 0.00 0.00 4.26
62 63 5.183713 TGTCAATGTTATTGCCCTTCTTGAG 59.816 40.000 0.00 0.00 0.00 3.02
63 64 5.076182 TGTCAATGTTATTGCCCTTCTTGA 58.924 37.500 0.00 0.00 0.00 3.02
64 65 5.389859 TGTCAATGTTATTGCCCTTCTTG 57.610 39.130 0.00 0.00 0.00 3.02
65 66 6.610075 AATGTCAATGTTATTGCCCTTCTT 57.390 33.333 0.00 0.00 0.00 2.52
66 67 6.400568 CAAATGTCAATGTTATTGCCCTTCT 58.599 36.000 0.00 0.00 0.00 2.85
67 68 5.581874 CCAAATGTCAATGTTATTGCCCTTC 59.418 40.000 0.00 0.00 0.00 3.46
68 69 5.012975 ACCAAATGTCAATGTTATTGCCCTT 59.987 36.000 0.00 0.00 0.00 3.95
69 70 4.531732 ACCAAATGTCAATGTTATTGCCCT 59.468 37.500 0.00 0.00 0.00 5.19
70 71 4.831107 ACCAAATGTCAATGTTATTGCCC 58.169 39.130 0.00 0.00 0.00 5.36
94 95 1.000283 CCTCTCGGAATCCAAGGATCG 60.000 57.143 1.37 3.11 33.08 3.69
139 140 8.174757 ACTTGGATTATAGTGTTTTTACCCCTT 58.825 33.333 0.00 0.00 0.00 3.95
208 209 8.215050 TCTGGAAGAATGGTTTGTCTAACTAAA 58.785 33.333 0.00 0.00 42.31 1.85
282 283 6.785488 TTATCGTAATGCCTGCTATGAAAG 57.215 37.500 0.00 0.00 0.00 2.62
394 401 2.105006 TCTGCTTCTTCATCTGCACC 57.895 50.000 0.00 0.00 0.00 5.01
409 416 8.437742 CAACTTTGACCAATTAAAATCATCTGC 58.562 33.333 0.00 0.00 0.00 4.26
413 420 8.210265 ACCACAACTTTGACCAATTAAAATCAT 58.790 29.630 0.00 0.00 0.00 2.45
478 485 4.408921 AGGTAGGCTATTTGTAGACATGCA 59.591 41.667 0.00 0.00 0.00 3.96
546 553 3.934457 AACCGAAAACAAATAGGGCAG 57.066 42.857 0.00 0.00 0.00 4.85
580 587 5.474532 TCTTGCACTTAATGAAGCAATGTCT 59.525 36.000 0.00 0.00 44.85 3.41
633 640 1.002366 GCAGTCTAACATGCTCCACG 58.998 55.000 0.00 0.00 39.38 4.94
634 641 2.005451 CTGCAGTCTAACATGCTCCAC 58.995 52.381 5.25 0.00 42.98 4.02
649 656 4.157289 ACCTGCATAAGACAAAATCTGCAG 59.843 41.667 7.63 7.63 46.39 4.41
665 672 1.909781 CACCCCAAAGCACCTGCAT 60.910 57.895 0.00 0.00 45.16 3.96
671 678 1.917872 TTCCATACACCCCAAAGCAC 58.082 50.000 0.00 0.00 0.00 4.40
697 704 8.981724 AGTTTTTCTTCTTTGTTAAGGTTCAC 57.018 30.769 0.00 0.00 32.02 3.18
927 970 8.973835 TTTTGTTTCTTTTAGAAATGTGTCGT 57.026 26.923 5.28 0.00 44.94 4.34
928 971 9.885743 CTTTTTGTTTCTTTTAGAAATGTGTCG 57.114 29.630 5.28 0.00 44.94 4.35
1122 1330 4.201970 GCGTTCTTCAGCTGTATAGAGTCT 60.202 45.833 14.67 0.00 0.00 3.24
1189 1402 6.364165 CGCAATTTGAACTTCATGTCTTTGAT 59.636 34.615 0.00 0.00 0.00 2.57
1200 1413 2.034053 TCCCACACGCAATTTGAACTTC 59.966 45.455 0.00 0.00 0.00 3.01
1207 1420 3.823873 TCACTAAATCCCACACGCAATTT 59.176 39.130 0.00 0.00 0.00 1.82
1300 1685 0.038599 TCACATGTGCCAGCTTCCAT 59.961 50.000 21.38 0.00 0.00 3.41
1393 1778 8.689972 CAGTATTGGATAGATTTCTGGCTTTTT 58.310 33.333 0.00 0.00 0.00 1.94
1394 1779 8.055181 TCAGTATTGGATAGATTTCTGGCTTTT 58.945 33.333 0.00 0.00 0.00 2.27
1395 1780 7.577303 TCAGTATTGGATAGATTTCTGGCTTT 58.423 34.615 0.00 0.00 0.00 3.51
1396 1781 7.141758 TCAGTATTGGATAGATTTCTGGCTT 57.858 36.000 0.00 0.00 0.00 4.35
1397 1782 6.753913 TCAGTATTGGATAGATTTCTGGCT 57.246 37.500 0.00 0.00 0.00 4.75
1474 1880 4.072131 TGAGCCATTTGAGAACACCTAAC 58.928 43.478 0.00 0.00 0.00 2.34
1479 1885 4.919754 GTGATTTGAGCCATTTGAGAACAC 59.080 41.667 0.00 0.00 0.00 3.32
1545 1951 1.588674 TCGAATTGAGTTGTTGGCGT 58.411 45.000 0.00 0.00 0.00 5.68
1547 1953 2.487762 TCCATCGAATTGAGTTGTTGGC 59.512 45.455 0.00 0.00 0.00 4.52
1578 1984 2.438951 TTTCGTAGGTGGGTCGGCAC 62.439 60.000 0.00 0.00 0.00 5.01
1579 1985 1.546589 ATTTCGTAGGTGGGTCGGCA 61.547 55.000 0.00 0.00 0.00 5.69
1589 1995 2.093306 TGCTGGACACATTTCGTAGG 57.907 50.000 0.00 0.00 0.00 3.18
1630 2036 2.612221 CCGACACTGGACTAAAAGGGTC 60.612 54.545 0.00 0.00 42.35 4.46
1631 2037 1.346722 CCGACACTGGACTAAAAGGGT 59.653 52.381 0.00 0.00 31.02 4.34
1632 2038 1.338769 CCCGACACTGGACTAAAAGGG 60.339 57.143 0.00 0.00 0.00 3.95
1655 2061 1.206578 CCAATGAACACGCGTGTCC 59.793 57.895 41.53 32.86 44.13 4.02
1661 2067 3.322706 GACCGGCCAATGAACACGC 62.323 63.158 0.00 0.00 0.00 5.34
1662 2068 2.686816 GGACCGGCCAATGAACACG 61.687 63.158 0.00 0.00 36.34 4.49
1667 2073 2.658679 CTATGCGGACCGGCCAATGA 62.659 60.000 17.22 0.00 35.94 2.57
1683 2089 0.249398 GGTCAACTGGGTCGTGCTAT 59.751 55.000 0.00 0.00 0.00 2.97
1696 2102 6.752168 TCTAGTGTAGTTAAACCTGGTCAAC 58.248 40.000 13.59 13.59 0.00 3.18
1700 2106 8.661752 ATTACTCTAGTGTAGTTAAACCTGGT 57.338 34.615 4.93 0.00 0.00 4.00
1724 2130 5.316167 TGTTGCTGAGGATTTTGTGTCTAT 58.684 37.500 0.00 0.00 0.00 1.98
1768 2175 0.248289 CCCATTTGGCCAGCTTTGAG 59.752 55.000 5.11 0.00 0.00 3.02
1794 2201 3.697439 ATTGTGATGGACCGGGCCG 62.697 63.158 24.84 21.46 0.00 6.13
1799 2206 3.005898 CGCGATTGTGATGGACCG 58.994 61.111 0.00 0.00 0.00 4.79
1802 2209 1.815003 CAGGCGCGATTGTGATGGA 60.815 57.895 12.10 0.00 0.00 3.41
1806 2213 4.695993 TGCCAGGCGCGATTGTGA 62.696 61.111 12.10 0.00 42.08 3.58
1833 2240 3.560068 GTCTAATAATCGTGCCCTTGTGG 59.440 47.826 0.00 0.00 37.09 4.17
1834 2241 3.245284 CGTCTAATAATCGTGCCCTTGTG 59.755 47.826 0.00 0.00 0.00 3.33
1838 2245 1.343465 CCCGTCTAATAATCGTGCCCT 59.657 52.381 0.00 0.00 0.00 5.19
1841 2248 1.145803 GGCCCGTCTAATAATCGTGC 58.854 55.000 0.00 0.00 0.00 5.34
1891 2298 2.925706 TAGGTCGTGCTTGGGCCA 60.926 61.111 0.00 0.00 37.74 5.36
1898 2305 3.119708 CCGTTTACTAACTAGGTCGTGCT 60.120 47.826 0.00 0.00 31.89 4.40
1922 2329 0.732880 CTGAACGTGCCACCGACTAG 60.733 60.000 0.00 0.00 0.00 2.57
1926 2333 4.228567 TGCTGAACGTGCCACCGA 62.229 61.111 0.00 0.00 0.00 4.69
1939 2346 2.329539 ATATGCGACCTGGGGTGCTG 62.330 60.000 0.00 0.00 35.25 4.41
1948 2355 1.680338 GGGCTGAAAATATGCGACCT 58.320 50.000 0.00 0.00 0.00 3.85
1951 2358 1.400142 CAACGGGCTGAAAATATGCGA 59.600 47.619 0.00 0.00 0.00 5.10
1953 2360 1.202405 CCCAACGGGCTGAAAATATGC 60.202 52.381 0.00 0.00 35.35 3.14
2004 2411 8.517056 ACGACCCGTTTCTTATTATTTTTCATT 58.483 29.630 0.00 0.00 36.35 2.57
2005 2412 7.966204 CACGACCCGTTTCTTATTATTTTTCAT 59.034 33.333 0.00 0.00 38.32 2.57
2006 2413 7.299586 CACGACCCGTTTCTTATTATTTTTCA 58.700 34.615 0.00 0.00 38.32 2.69
2007 2414 6.249893 GCACGACCCGTTTCTTATTATTTTTC 59.750 38.462 0.00 0.00 38.32 2.29
2008 2415 6.088173 GCACGACCCGTTTCTTATTATTTTT 58.912 36.000 0.00 0.00 38.32 1.94
2009 2416 5.392272 GGCACGACCCGTTTCTTATTATTTT 60.392 40.000 0.00 0.00 38.32 1.82
2010 2417 4.095334 GGCACGACCCGTTTCTTATTATTT 59.905 41.667 0.00 0.00 38.32 1.40
2011 2418 3.624410 GGCACGACCCGTTTCTTATTATT 59.376 43.478 0.00 0.00 38.32 1.40
2012 2419 3.200483 GGCACGACCCGTTTCTTATTAT 58.800 45.455 0.00 0.00 38.32 1.28
2013 2420 2.620242 GGCACGACCCGTTTCTTATTA 58.380 47.619 0.00 0.00 38.32 0.98
2014 2421 1.445871 GGCACGACCCGTTTCTTATT 58.554 50.000 0.00 0.00 38.32 1.40
2069 2476 1.448013 CTCTTTCCGGGAGCGGAAC 60.448 63.158 0.00 0.00 46.29 3.62
2070 2477 1.189524 TTCTCTTTCCGGGAGCGGAA 61.190 55.000 0.00 0.00 45.16 4.30
2073 2480 1.352156 CGTTTCTCTTTCCGGGAGCG 61.352 60.000 0.00 0.00 0.00 5.03
2080 2487 1.676314 GCCCTCTCCGTTTCTCTTTCC 60.676 57.143 0.00 0.00 0.00 3.13
2087 2494 0.035439 TGATTGGCCCTCTCCGTTTC 60.035 55.000 0.00 0.00 0.00 2.78
2089 2496 0.404040 TTTGATTGGCCCTCTCCGTT 59.596 50.000 0.00 0.00 0.00 4.44
2090 2497 0.404040 TTTTGATTGGCCCTCTCCGT 59.596 50.000 0.00 0.00 0.00 4.69
2091 2498 1.098050 CTTTTGATTGGCCCTCTCCG 58.902 55.000 0.00 0.00 0.00 4.63
2137 2544 0.250513 CCAACGGGGAAAGAGGAGAG 59.749 60.000 0.00 0.00 40.01 3.20
2298 2705 2.933878 TTTTGTGCCGCTGTCGTCCT 62.934 55.000 0.00 0.00 0.00 3.85
2402 2809 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2403 2810 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2404 2811 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2405 2812 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2406 2813 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2407 2814 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2408 2815 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2409 2816 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2410 2817 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2411 2818 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2412 2819 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
2413 2820 4.280677 GGAGAGAGAGAGAGAGAGAGAGAG 59.719 54.167 0.00 0.00 0.00 3.20
2414 2821 4.219115 GGAGAGAGAGAGAGAGAGAGAGA 58.781 52.174 0.00 0.00 0.00 3.10
2415 2822 3.323403 GGGAGAGAGAGAGAGAGAGAGAG 59.677 56.522 0.00 0.00 0.00 3.20
2416 2823 3.309296 GGGAGAGAGAGAGAGAGAGAGA 58.691 54.545 0.00 0.00 0.00 3.10
2417 2824 2.370189 GGGGAGAGAGAGAGAGAGAGAG 59.630 59.091 0.00 0.00 0.00 3.20
2418 2825 2.408565 GGGGAGAGAGAGAGAGAGAGA 58.591 57.143 0.00 0.00 0.00 3.10
2419 2826 1.070758 CGGGGAGAGAGAGAGAGAGAG 59.929 61.905 0.00 0.00 0.00 3.20
2420 2827 1.128200 CGGGGAGAGAGAGAGAGAGA 58.872 60.000 0.00 0.00 0.00 3.10
2421 2828 0.108585 CCGGGGAGAGAGAGAGAGAG 59.891 65.000 0.00 0.00 0.00 3.20
2422 2829 0.326713 TCCGGGGAGAGAGAGAGAGA 60.327 60.000 0.00 0.00 0.00 3.10
2423 2830 0.108585 CTCCGGGGAGAGAGAGAGAG 59.891 65.000 9.15 0.00 44.53 3.20
2424 2831 1.990160 GCTCCGGGGAGAGAGAGAGA 61.990 65.000 18.75 0.00 44.53 3.10
2425 2832 1.528309 GCTCCGGGGAGAGAGAGAG 60.528 68.421 18.75 0.00 44.53 3.20
2426 2833 1.864263 TTGCTCCGGGGAGAGAGAGA 61.864 60.000 18.75 0.00 44.53 3.10
2427 2834 0.758685 ATTGCTCCGGGGAGAGAGAG 60.759 60.000 18.75 0.00 44.53 3.20
2428 2835 0.325671 AATTGCTCCGGGGAGAGAGA 60.326 55.000 18.75 1.12 44.53 3.10
2429 2836 1.414158 TAATTGCTCCGGGGAGAGAG 58.586 55.000 18.75 0.00 44.53 3.20
2430 2837 1.874129 TTAATTGCTCCGGGGAGAGA 58.126 50.000 18.75 5.97 44.53 3.10
2431 2838 2.289565 GTTTAATTGCTCCGGGGAGAG 58.710 52.381 18.75 0.00 44.53 3.20
2432 2839 1.631388 TGTTTAATTGCTCCGGGGAGA 59.369 47.619 18.75 0.00 44.53 3.71
2433 2840 1.743394 GTGTTTAATTGCTCCGGGGAG 59.257 52.381 4.80 10.44 44.56 4.30
2434 2841 1.828979 GTGTTTAATTGCTCCGGGGA 58.171 50.000 4.80 0.00 0.00 4.81
2435 2842 0.450184 CGTGTTTAATTGCTCCGGGG 59.550 55.000 0.00 0.00 0.00 5.73
2436 2843 0.450184 CCGTGTTTAATTGCTCCGGG 59.550 55.000 0.00 0.00 0.00 5.73
2481 3103 3.644399 GAGGGTCGGCGGTGAAGAC 62.644 68.421 7.21 0.00 0.00 3.01
2482 3104 3.379445 GAGGGTCGGCGGTGAAGA 61.379 66.667 7.21 0.00 0.00 2.87
2483 3105 3.358076 GAGAGGGTCGGCGGTGAAG 62.358 68.421 7.21 0.00 0.00 3.02
2484 3106 3.379445 GAGAGGGTCGGCGGTGAA 61.379 66.667 7.21 0.00 0.00 3.18
2485 3107 2.561467 TATGAGAGGGTCGGCGGTGA 62.561 60.000 7.21 0.00 0.00 4.02
2486 3108 1.464376 ATATGAGAGGGTCGGCGGTG 61.464 60.000 7.21 0.00 0.00 4.94
2493 3115 2.635427 GGGAGGAACATATGAGAGGGTC 59.365 54.545 10.38 0.00 0.00 4.46
2732 3354 1.191535 GGGATTAACCAAACAGGGCC 58.808 55.000 0.00 0.00 43.89 5.80
2741 3363 2.042433 CCTTTGGTGAGGGGATTAACCA 59.958 50.000 0.00 0.00 40.90 3.67
2874 3496 1.305219 ACGGGTGGATTTGCACATCG 61.305 55.000 6.76 12.70 0.00 3.84
3048 3671 7.120432 GTCTTCTCTAACCTTCTCATTTGCAAT 59.880 37.037 0.00 0.00 0.00 3.56
3100 3723 7.920682 CACAGTTTAAGCTGTTGAAACCTTAAT 59.079 33.333 20.87 0.00 46.45 1.40
3136 3759 3.627395 ATCTACACCGATCAAAAGCCA 57.373 42.857 0.00 0.00 0.00 4.75
3230 3853 5.636121 AGATGTATGCATGTTTTGTTGCTTG 59.364 36.000 10.16 0.00 39.60 4.01
3312 3935 9.457436 ACCTTAACTAAAAGAGTTCAACAAAGA 57.543 29.630 0.00 0.00 45.81 2.52
3379 4005 7.986085 ATATCAAAACCATATGCAGGAGTAC 57.014 36.000 0.00 0.00 0.00 2.73
3381 4007 7.902920 AAATATCAAAACCATATGCAGGAGT 57.097 32.000 0.00 0.00 0.00 3.85
3402 4028 6.192970 AGCATAAGGGTGAGCATACTAAAT 57.807 37.500 0.00 0.00 0.00 1.40
3444 4070 4.522405 TGCTTTCATTTGTGCCTTAGCTAA 59.478 37.500 5.94 5.94 40.80 3.09
3455 4081 8.798859 ATACAGATTCTACTGCTTTCATTTGT 57.201 30.769 0.00 0.00 41.06 2.83
3505 4131 6.058183 AGGACACAGATTATCAAAGCCATAC 58.942 40.000 0.00 0.00 0.00 2.39
3530 4156 7.035612 GTCCAATAAAGAAAAGCATAAGGGTG 58.964 38.462 0.00 0.00 0.00 4.61
3531 4157 6.954102 AGTCCAATAAAGAAAAGCATAAGGGT 59.046 34.615 0.00 0.00 0.00 4.34
3549 4175 6.215636 ACCACTCATAACTAAAGGAGTCCAAT 59.784 38.462 12.86 1.59 38.48 3.16
3558 4184 8.306680 TCGAAGAAAACCACTCATAACTAAAG 57.693 34.615 0.00 0.00 0.00 1.85
3608 4234 8.691797 TGTCTATACTCTATACACATGCAAACA 58.308 33.333 0.00 0.00 0.00 2.83
3710 4338 9.897744 ACTGAACAACATGTGAATAAACAATAG 57.102 29.630 0.00 0.00 32.81 1.73
3742 4370 7.921214 GCAGTAGAATGTTACAGCTAGTATTGA 59.079 37.037 5.47 0.00 34.40 2.57
3773 4401 7.125113 CCGAATCAAAACAAAGAAAAACATGG 58.875 34.615 0.00 0.00 0.00 3.66
3823 4451 4.033358 GTCAAAGATGATGACACGGACATC 59.967 45.833 10.33 10.33 45.13 3.06
3866 4494 6.293081 CCTTCTATTGACCATAGAACGCAATG 60.293 42.308 5.15 0.00 45.83 2.82
3908 4536 1.229177 TACACCAGCAGAGCCAGGA 60.229 57.895 0.00 0.00 0.00 3.86
3910 4538 0.251354 ATGTACACCAGCAGAGCCAG 59.749 55.000 0.00 0.00 0.00 4.85
3968 4596 2.038164 GTGATATTACCCGGGGAAGGTC 59.962 54.545 25.68 22.82 38.89 3.85
4091 4719 8.358148 TCTGAATTTACTTTCTACTCGAAGTGT 58.642 33.333 0.00 0.00 38.10 3.55
4124 4752 9.512435 CATGAAAACCATTGAATAGAGAACATC 57.488 33.333 0.00 0.00 31.94 3.06
4209 4838 1.417517 ACAGTGTGACAGATGCAAGGA 59.582 47.619 0.00 0.00 0.00 3.36
4259 4888 2.483876 GTGTAACTGAGCTCAAGCACA 58.516 47.619 18.85 17.15 45.16 4.57
4269 4898 2.451132 CGGATAGTGCGTGTAACTGAG 58.549 52.381 0.00 0.00 31.75 3.35
4315 4947 3.819337 ACTCTTCTAACACTCTACGCACA 59.181 43.478 0.00 0.00 0.00 4.57
4319 4951 5.392165 CCCTGAACTCTTCTAACACTCTACG 60.392 48.000 0.00 0.00 0.00 3.51
4332 4964 4.731313 ACAGAAATTCCCCTGAACTCTT 57.269 40.909 8.77 0.00 34.65 2.85
4359 4991 5.187967 TGTTGTAGGGGAAAACAAAATGTGT 59.812 36.000 0.00 0.00 44.64 3.72
4398 5030 6.379386 GGTACAAGTGAACATAAAAAGGAGC 58.621 40.000 0.00 0.00 0.00 4.70
4416 5048 1.964933 TCACTCACATGACGGGTACAA 59.035 47.619 0.00 0.00 0.00 2.41
4425 5057 1.823610 CAGCCTCTCTCACTCACATGA 59.176 52.381 0.00 0.00 0.00 3.07
4439 5071 0.980423 ACTCTCCCTTTCACAGCCTC 59.020 55.000 0.00 0.00 0.00 4.70
4440 5072 0.689623 CACTCTCCCTTTCACAGCCT 59.310 55.000 0.00 0.00 0.00 4.58
4450 5082 1.228894 TCGCTGGTTCACTCTCCCT 60.229 57.895 0.00 0.00 0.00 4.20
4466 5098 0.309302 CAGCGGAGTAGACATCCTCG 59.691 60.000 0.00 0.00 34.45 4.63
4471 5103 8.556213 TTTAAAAATAACAGCGGAGTAGACAT 57.444 30.769 0.00 0.00 0.00 3.06
4527 5159 3.478509 ACCGGCATAACTTACACACAAA 58.521 40.909 0.00 0.00 0.00 2.83
4534 5166 3.439129 AGCAAAAGACCGGCATAACTTAC 59.561 43.478 0.00 0.00 0.00 2.34
4593 5225 4.657075 AAACATGTAACGGTGAATCGAC 57.343 40.909 0.00 0.00 0.00 4.20
4736 5368 3.640967 TCTATACCAAATGCCCCAATTGC 59.359 43.478 0.00 0.00 0.00 3.56
4748 5380 9.166173 CTTGTTGATCACTGAATCTATACCAAA 57.834 33.333 0.00 0.00 0.00 3.28
4776 5408 4.943705 TCAAGAGCAACAATAAAGCTAGGG 59.056 41.667 0.00 0.00 39.02 3.53
4829 5461 3.646162 TGATTAACCATACCTGCGAGGAT 59.354 43.478 8.91 0.00 37.67 3.24
4834 5466 6.092944 TGTTTTACTGATTAACCATACCTGCG 59.907 38.462 0.00 0.00 0.00 5.18
4860 5492 9.900264 GTTTCACATAAGAACAAACATGAAAAC 57.100 29.630 0.00 0.00 36.78 2.43
4909 5545 2.430694 ACTGTCGGAATGCTGCATAGTA 59.569 45.455 16.58 0.00 0.00 1.82
5038 5677 2.096596 GCATTCTGCACAGCTCTCC 58.903 57.895 0.00 0.00 44.26 3.71
5072 5711 4.813161 ACAGCAATGAATCTCATAACCTCG 59.187 41.667 0.00 0.00 35.76 4.63
5138 5777 1.002868 CTCCCCAGGCAACACAGAG 60.003 63.158 0.00 0.00 41.41 3.35
5163 5802 4.756642 CACATGCCACGAGGTAATCATATT 59.243 41.667 0.00 0.00 37.19 1.28
5193 5832 5.121811 CCTCCTCATGTCAAGGATAAACTG 58.878 45.833 2.28 0.00 42.01 3.16
5194 5833 4.384647 GCCTCCTCATGTCAAGGATAAACT 60.385 45.833 12.28 0.00 42.01 2.66
5208 5847 4.473520 CGCCAACCGCCTCCTCAT 62.474 66.667 0.00 0.00 0.00 2.90
5257 5896 4.803088 CGAATCTCTGTCTTTCATCCTCAC 59.197 45.833 0.00 0.00 0.00 3.51
5263 5902 5.049167 GCTGATCGAATCTCTGTCTTTCAT 58.951 41.667 0.00 0.00 0.00 2.57
5267 5906 3.698539 TCAGCTGATCGAATCTCTGTCTT 59.301 43.478 13.74 0.00 34.53 3.01
5327 5966 2.333926 CGCCGTGTATCAGAAGTGAAA 58.666 47.619 0.00 0.00 35.88 2.69
5349 5988 1.587043 TTCTCCTGCCGTCGAGTCAG 61.587 60.000 0.00 0.00 0.00 3.51
5373 6012 1.352017 TGGATCCTGGATATTGCGCAT 59.648 47.619 12.75 3.99 0.00 4.73
5404 6043 1.280133 ACAGGCTCTAAGCATCTGCAA 59.720 47.619 4.79 0.00 44.75 4.08
5462 6101 0.588252 CGTGGAGCTGACTTGTTTGG 59.412 55.000 0.00 0.00 0.00 3.28
5464 6103 2.321213 GCGTGGAGCTGACTTGTTT 58.679 52.632 0.00 0.00 44.04 2.83
5524 6163 1.752198 CGACACTTTGGGGACTCCA 59.248 57.895 0.00 0.00 45.43 3.86
5529 6168 1.488705 ATGGAGCGACACTTTGGGGA 61.489 55.000 0.00 0.00 0.00 4.81
5542 6181 2.996168 AATACGGGAGCGCATGGAGC 62.996 60.000 11.47 0.00 40.87 4.70
5543 6182 0.532862 AAATACGGGAGCGCATGGAG 60.533 55.000 11.47 0.00 0.00 3.86
5544 6183 0.531974 GAAATACGGGAGCGCATGGA 60.532 55.000 11.47 0.00 0.00 3.41
5545 6184 1.831389 CGAAATACGGGAGCGCATGG 61.831 60.000 11.47 0.00 38.46 3.66
5546 6185 1.564622 CGAAATACGGGAGCGCATG 59.435 57.895 11.47 0.00 38.46 4.06
5547 6186 2.244651 GCGAAATACGGGAGCGCAT 61.245 57.895 11.47 0.00 46.19 4.73
5548 6187 2.888534 GCGAAATACGGGAGCGCA 60.889 61.111 11.47 0.00 46.19 6.09
5556 6195 1.518572 ACCAGCTCCGCGAAATACG 60.519 57.895 8.23 0.00 45.66 3.06
5597 6236 4.910195 ACTTGGAACAGCTTGATATGACA 58.090 39.130 0.00 0.00 42.39 3.58
5598 6237 4.333926 GGACTTGGAACAGCTTGATATGAC 59.666 45.833 0.00 0.00 42.39 3.06
5599 6238 4.225942 AGGACTTGGAACAGCTTGATATGA 59.774 41.667 0.00 0.00 42.39 2.15
5600 6239 4.521146 AGGACTTGGAACAGCTTGATATG 58.479 43.478 0.00 0.00 42.39 1.78
5601 6240 4.851639 AGGACTTGGAACAGCTTGATAT 57.148 40.909 0.00 0.00 42.39 1.63
5602 6241 4.041567 TCAAGGACTTGGAACAGCTTGATA 59.958 41.667 11.76 0.00 42.39 2.15
5603 6242 3.152341 CAAGGACTTGGAACAGCTTGAT 58.848 45.455 4.15 0.00 42.39 2.57
5604 6243 2.172505 TCAAGGACTTGGAACAGCTTGA 59.827 45.455 11.76 0.00 42.39 3.02
5605 6244 2.575532 TCAAGGACTTGGAACAGCTTG 58.424 47.619 11.76 0.00 42.39 4.01
5606 6245 3.515602 ATCAAGGACTTGGAACAGCTT 57.484 42.857 11.76 0.00 42.39 3.74
5607 6246 4.225942 TGATATCAAGGACTTGGAACAGCT 59.774 41.667 11.76 0.00 42.39 4.24
5608 6247 4.517285 TGATATCAAGGACTTGGAACAGC 58.483 43.478 11.76 0.00 42.39 4.40
5634 6273 1.609501 CCCTCGAGGACCTGGAACA 60.610 63.158 33.39 0.00 38.24 3.18
5635 6274 1.305046 TCCCTCGAGGACCTGGAAC 60.305 63.158 33.39 0.00 40.93 3.62
5636 6275 1.000486 CTCCCTCGAGGACCTGGAA 60.000 63.158 33.39 7.71 40.93 3.53
5637 6276 2.239439 ACTCCCTCGAGGACCTGGA 61.239 63.158 33.39 19.03 40.93 3.86
5638 6277 2.055042 CACTCCCTCGAGGACCTGG 61.055 68.421 33.39 15.58 40.93 4.45
5639 6278 1.304547 ACACTCCCTCGAGGACCTG 60.305 63.158 33.39 23.32 40.93 4.00
5640 6279 1.000646 GACACTCCCTCGAGGACCT 60.001 63.158 33.39 10.93 40.93 3.85
5641 6280 0.684805 ATGACACTCCCTCGAGGACC 60.685 60.000 33.39 14.08 40.93 4.46
5642 6281 2.054232 TATGACACTCCCTCGAGGAC 57.946 55.000 33.39 15.50 40.93 3.85
5643 6282 2.174854 TGATATGACACTCCCTCGAGGA 59.825 50.000 33.39 17.24 44.91 3.71
5644 6283 2.587522 TGATATGACACTCCCTCGAGG 58.412 52.381 25.36 25.36 40.77 4.63
5645 6284 3.551863 GCTTGATATGACACTCCCTCGAG 60.552 52.174 5.13 5.13 42.32 4.04
5646 6285 2.362397 GCTTGATATGACACTCCCTCGA 59.638 50.000 0.00 0.00 0.00 4.04
5647 6286 2.363680 AGCTTGATATGACACTCCCTCG 59.636 50.000 0.00 0.00 0.00 4.63
5648 6287 3.133721 ACAGCTTGATATGACACTCCCTC 59.866 47.826 0.00 0.00 0.00 4.30
5649 6288 3.110705 ACAGCTTGATATGACACTCCCT 58.889 45.455 0.00 0.00 0.00 4.20
5650 6289 3.550437 ACAGCTTGATATGACACTCCC 57.450 47.619 0.00 0.00 0.00 4.30
5651 6290 3.873952 GGAACAGCTTGATATGACACTCC 59.126 47.826 0.00 0.00 0.00 3.85
5652 6291 4.507710 TGGAACAGCTTGATATGACACTC 58.492 43.478 0.00 0.00 0.00 3.51
5653 6292 4.558226 TGGAACAGCTTGATATGACACT 57.442 40.909 0.00 0.00 0.00 3.55
5698 6337 4.009539 CAGCAGTGCTAGCGCTAG 57.990 61.111 34.98 34.98 36.40 3.42
5809 6448 8.879342 ACATCAACTAGCAGAAGACATAATAC 57.121 34.615 0.00 0.00 0.00 1.89
5821 6460 3.111838 CAGCGACTACATCAACTAGCAG 58.888 50.000 0.00 0.00 0.00 4.24
5824 6463 4.624336 ACTCAGCGACTACATCAACTAG 57.376 45.455 0.00 0.00 0.00 2.57
5866 6505 3.343617 TCCCAAACGTTCCATCATCTTC 58.656 45.455 0.00 0.00 0.00 2.87
5867 6506 3.433306 TCCCAAACGTTCCATCATCTT 57.567 42.857 0.00 0.00 0.00 2.40
5868 6507 3.652057 ATCCCAAACGTTCCATCATCT 57.348 42.857 0.00 0.00 0.00 2.90
5869 6508 5.765182 AGAATATCCCAAACGTTCCATCATC 59.235 40.000 0.00 0.00 0.00 2.92
5870 6509 5.694995 AGAATATCCCAAACGTTCCATCAT 58.305 37.500 0.00 0.00 0.00 2.45
5871 6510 5.110814 AGAATATCCCAAACGTTCCATCA 57.889 39.130 0.00 0.00 0.00 3.07
5872 6511 4.515567 GGAGAATATCCCAAACGTTCCATC 59.484 45.833 0.00 0.00 43.01 3.51
5873 6512 4.461198 GGAGAATATCCCAAACGTTCCAT 58.539 43.478 0.00 0.00 43.01 3.41
5874 6513 3.680475 CGGAGAATATCCCAAACGTTCCA 60.680 47.826 0.00 0.00 46.50 3.53
5875 6514 2.870411 CGGAGAATATCCCAAACGTTCC 59.130 50.000 0.00 0.00 46.50 3.62
5876 6515 2.287103 GCGGAGAATATCCCAAACGTTC 59.713 50.000 0.00 0.00 46.50 3.95
5893 6532 1.737838 CTGCAAGTGGATTAAGCGGA 58.262 50.000 0.00 0.00 33.54 5.54
5923 6562 8.874156 ACATCATCTCCAGCTTATTTACAGATA 58.126 33.333 0.00 0.00 0.00 1.98
5940 6579 5.431765 AGGTGTTTGTATGGACATCATCTC 58.568 41.667 0.00 0.00 37.30 2.75
5946 6585 6.539173 TCACTAAAGGTGTTTGTATGGACAT 58.461 36.000 0.00 0.00 45.50 3.06
5947 6586 5.931294 TCACTAAAGGTGTTTGTATGGACA 58.069 37.500 0.00 0.00 45.50 4.02
5948 6587 6.228258 TCTCACTAAAGGTGTTTGTATGGAC 58.772 40.000 0.00 0.00 45.50 4.02
5953 6592 5.925509 AGCTTCTCACTAAAGGTGTTTGTA 58.074 37.500 0.00 0.00 45.50 2.41
5981 6620 6.897259 ACAATTAAAATGACATGCAGATGC 57.103 33.333 0.00 0.00 42.50 3.91
6026 6665 7.497249 AGAATACTGCACATTTATTCCTCTCAC 59.503 37.037 8.16 0.00 34.16 3.51
6098 6737 9.578439 GGTATCAACTGTAGTTTATAACGAAGT 57.422 33.333 0.00 0.00 38.44 3.01
6103 6742 6.201615 GCGGGGTATCAACTGTAGTTTATAAC 59.798 42.308 5.75 5.75 35.83 1.89
6114 6753 0.179094 TAAGCGCGGGGTATCAACTG 60.179 55.000 8.83 0.00 0.00 3.16
6126 6765 1.361668 ATTCACCACAGCTAAGCGCG 61.362 55.000 0.00 0.00 45.59 6.86
6131 6770 3.076621 CAGCAGAATTCACCACAGCTAA 58.923 45.455 8.44 0.00 0.00 3.09
6177 6824 2.801679 CGTTCCTACAAGGTTTTGCGTA 59.198 45.455 0.00 0.00 37.85 4.42
6274 6926 4.200874 TCGTTTTTCCTAAGCTTTGACCA 58.799 39.130 3.20 0.00 0.00 4.02
6330 6982 2.029918 AGCGACGCATATCAGCTCATAA 60.030 45.455 23.70 0.00 31.94 1.90
6396 7058 1.097547 ATCAATGAAAGGCGCCGGAG 61.098 55.000 23.20 1.55 0.00 4.63
6397 7059 1.077787 ATCAATGAAAGGCGCCGGA 60.078 52.632 23.20 11.38 0.00 5.14
6398 7060 1.097547 AGATCAATGAAAGGCGCCGG 61.098 55.000 23.20 0.00 0.00 6.13
6399 7061 2.397751 AGATCAATGAAAGGCGCCG 58.602 52.632 23.20 4.58 0.00 6.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.