Multiple sequence alignment - TraesCS6B01G449900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G449900 chr6B 100.000 9446 0 0 1 9446 708947379 708937934 0.000000e+00 17444.0
1 TraesCS6B01G449900 chr6D 96.657 4577 123 5 1247 5818 464950767 464946216 0.000000e+00 7577.0
2 TraesCS6B01G449900 chr6D 94.893 1782 71 8 5900 7674 464946217 464944449 0.000000e+00 2769.0
3 TraesCS6B01G449900 chr6D 91.883 1577 80 27 7835 9389 464944450 464942900 0.000000e+00 2159.0
4 TraesCS6B01G449900 chr6D 90.987 1287 71 20 1 1278 464952025 464950775 0.000000e+00 1692.0
5 TraesCS6B01G449900 chr6D 92.079 101 7 1 5811 5910 248004092 248003992 3.560000e-29 141.0
6 TraesCS6B01G449900 chr6A 96.138 4583 152 7 1241 5818 611492837 611488275 0.000000e+00 7459.0
7 TraesCS6B01G449900 chr6A 93.655 1781 70 9 5900 7674 611488276 611486533 0.000000e+00 2623.0
8 TraesCS6B01G449900 chr6A 90.208 1583 80 32 7835 9389 611486534 611484999 0.000000e+00 1995.0
9 TraesCS6B01G449900 chr6A 90.104 1061 62 15 236 1278 611493874 611492839 0.000000e+00 1338.0
10 TraesCS6B01G449900 chr5D 91.463 164 12 2 7674 7836 436422559 436422397 3.430000e-54 224.0
11 TraesCS6B01G449900 chr2D 90.683 161 15 0 7674 7834 73403045 73402885 2.070000e-51 215.0
12 TraesCS6B01G449900 chr1D 90.683 161 14 1 7674 7834 473998936 473998777 7.430000e-51 213.0
13 TraesCS6B01G449900 chr1D 92.157 102 7 1 5813 5913 287427984 287427883 9.890000e-30 143.0
14 TraesCS6B01G449900 chr7B 89.286 168 14 3 7671 7837 461739323 461739487 3.460000e-49 207.0
15 TraesCS6B01G449900 chr7B 96.667 90 3 0 5815 5904 8925268 8925179 5.910000e-32 150.0
16 TraesCS6B01G449900 chr7A 89.634 164 16 1 7671 7834 732053320 732053482 3.460000e-49 207.0
17 TraesCS6B01G449900 chr5A 89.157 166 16 2 7674 7838 137279729 137279565 1.240000e-48 206.0
18 TraesCS6B01G449900 chr5A 93.878 98 4 2 5814 5909 451716348 451716445 7.640000e-31 147.0
19 TraesCS6B01G449900 chr4D 81.132 265 40 7 8033 8296 126657552 126657297 4.470000e-48 204.0
20 TraesCS6B01G449900 chr3D 89.024 164 18 0 7671 7834 110409447 110409610 4.470000e-48 204.0
21 TraesCS6B01G449900 chr7D 88.554 166 18 1 7670 7835 622372345 622372181 5.790000e-47 200.0
22 TraesCS6B01G449900 chr7D 91.429 105 6 3 5811 5914 204732460 204732358 3.560000e-29 141.0
23 TraesCS6B01G449900 chr2B 87.791 172 20 1 7663 7834 694067867 694068037 5.790000e-47 200.0
24 TraesCS6B01G449900 chr2B 96.970 33 1 0 3794 3826 262746945 262746913 1.000000e-03 56.5
25 TraesCS6B01G449900 chr5B 95.000 100 4 1 5812 5911 74153102 74153200 1.270000e-33 156.0
26 TraesCS6B01G449900 chr5B 84.615 156 20 3 8033 8188 430146877 430146726 1.640000e-32 152.0
27 TraesCS6B01G449900 chr5B 84.615 156 20 3 8033 8188 430153585 430153434 1.640000e-32 152.0
28 TraesCS6B01G449900 chr5B 84.615 156 20 3 8033 8188 430252003 430251852 1.640000e-32 152.0
29 TraesCS6B01G449900 chr5B 97.701 87 2 0 5815 5901 517417389 517417475 5.910000e-32 150.0
30 TraesCS6B01G449900 chr5B 93.939 99 4 2 5817 5914 458620004 458619907 2.130000e-31 148.0
31 TraesCS6B01G449900 chr5B 96.970 33 1 0 3794 3826 235793919 235793887 1.000000e-03 56.5
32 TraesCS6B01G449900 chr2A 93.878 98 5 1 5813 5909 127212229 127212326 7.640000e-31 147.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G449900 chr6B 708937934 708947379 9445 True 17444.00 17444 100.00000 1 9446 1 chr6B.!!$R1 9445
1 TraesCS6B01G449900 chr6D 464942900 464952025 9125 True 3549.25 7577 93.60500 1 9389 4 chr6D.!!$R2 9388
2 TraesCS6B01G449900 chr6A 611484999 611493874 8875 True 3353.75 7459 92.52625 236 9389 4 chr6A.!!$R1 9153

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
599 619 0.179056 CCGGACCGAGCATTAACCAT 60.179 55.000 17.49 0.0 0.00 3.55 F
1488 1556 0.567182 AGATGGAGGAGATGAGGGCT 59.433 55.000 0.00 0.0 0.00 5.19 F
1824 1895 0.034670 ACTCTTCTGATGGGGCAAGC 60.035 55.000 0.00 0.0 0.00 4.01 F
3380 3457 0.036732 AAGGCGACAAAGGCTCATGA 59.963 50.000 7.20 0.0 46.87 3.07 F
3470 3547 0.387239 GAAGGTGACATTGTTGCGGC 60.387 55.000 0.00 0.0 0.00 6.53 F
3570 3647 0.674581 CTCACTGCGATGCCCAAGAA 60.675 55.000 0.00 0.0 0.00 2.52 F
5022 5099 0.179045 ATGCTATGGTGGTTCTCCGC 60.179 55.000 0.00 0.0 42.95 5.54 F
5572 5649 0.250513 CGCTGGCTCTAAAGAAGGGT 59.749 55.000 0.00 0.0 0.00 4.34 F
6493 6575 0.725686 CAAAGTCTGATGGCAGCTCG 59.274 55.000 3.69 0.0 42.01 5.03 F
7300 7382 1.546476 AGTGGAGCTGTAGAAAGTCGG 59.454 52.381 0.00 0.0 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1492 1560 0.233332 GCATAATTCTCTGCGGCGAC 59.767 55.000 12.98 2.02 0.00 5.19 R
2628 2702 0.602638 TTACAGCAGCAACACCTCGG 60.603 55.000 0.00 0.00 0.00 4.63 R
3446 3523 2.100584 GCAACAATGTCACCTTCAACCA 59.899 45.455 0.00 0.00 0.00 3.67 R
4335 4412 0.466922 CATCCTCCCCACAATGAGCC 60.467 60.000 0.00 0.00 0.00 4.70 R
5022 5099 1.063174 GCAGCATCCGTAAAGAGCTTG 59.937 52.381 0.00 0.00 32.35 4.01 R
5211 5288 1.950484 GCACCACCAACAGTATCTGGG 60.950 57.143 1.90 0.00 37.00 4.45 R
5923 6000 0.106149 ACGAGAAAGGGACCACACAC 59.894 55.000 0.00 0.00 0.00 3.82 R
6608 6690 1.630244 CGAACCTGTGCAGCTGCTAC 61.630 60.000 36.61 30.04 42.66 3.58 R
7763 7845 0.039618 ACATCCGGAGCAAAATGGGT 59.960 50.000 11.34 0.00 0.00 4.51 R
9031 9128 0.570727 TGGGGGATATACAGAGGGCA 59.429 55.000 0.00 0.00 0.00 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 9.722056 GCGTGAATCTCAAAGTTTTATATTGAT 57.278 29.630 0.00 0.00 33.03 2.57
89 90 2.031120 GAGAGACATGGAGACTCCTGG 58.969 57.143 22.14 15.67 39.43 4.45
112 113 3.953712 TTCTCTGTGGTAGAATTGCGA 57.046 42.857 0.00 0.00 34.32 5.10
131 132 5.122519 TGCGAATTGTCCATACATGTATGT 58.877 37.500 33.33 20.13 40.90 2.29
149 150 7.744087 TGTATGTAAAGTGAGCTTTGACATT 57.256 32.000 5.17 0.00 44.00 2.71
150 151 7.584108 TGTATGTAAAGTGAGCTTTGACATTG 58.416 34.615 5.17 0.00 44.00 2.82
211 212 2.225496 TGGGCCCATATGAAAACTTGGT 60.225 45.455 24.45 0.00 0.00 3.67
300 301 2.602257 GCCCATATGAAAACTTGGCC 57.398 50.000 3.65 0.00 0.00 5.36
366 384 2.625737 GTAACCTTCGGCCTACCTTTC 58.374 52.381 0.00 0.00 0.00 2.62
409 427 9.614792 CATATAATCCCTATTTACTAACTGGCC 57.385 37.037 0.00 0.00 0.00 5.36
432 450 2.712057 ACGGTACCTTTACGACACAG 57.288 50.000 10.90 0.00 0.00 3.66
440 458 0.938713 TTTACGACACAGCAAACCGG 59.061 50.000 0.00 0.00 0.00 5.28
456 474 1.628447 CCGGCGCGCTTGTAGTTTTA 61.628 55.000 32.29 0.00 0.00 1.52
468 486 2.864946 TGTAGTTTTAGCGCGAAACACA 59.135 40.909 30.27 27.15 38.99 3.72
599 619 0.179056 CCGGACCGAGCATTAACCAT 60.179 55.000 17.49 0.00 0.00 3.55
600 620 1.217882 CGGACCGAGCATTAACCATC 58.782 55.000 8.64 0.00 0.00 3.51
601 621 1.472552 CGGACCGAGCATTAACCATCA 60.473 52.381 8.64 0.00 0.00 3.07
602 622 2.639065 GGACCGAGCATTAACCATCAA 58.361 47.619 0.00 0.00 0.00 2.57
603 623 2.354821 GGACCGAGCATTAACCATCAAC 59.645 50.000 0.00 0.00 0.00 3.18
604 624 2.354821 GACCGAGCATTAACCATCAACC 59.645 50.000 0.00 0.00 0.00 3.77
605 625 2.290641 ACCGAGCATTAACCATCAACCA 60.291 45.455 0.00 0.00 0.00 3.67
645 665 3.299977 CAGGGGTGTCGACGGTCA 61.300 66.667 11.62 0.00 0.00 4.02
718 738 4.985538 TCAGCAAACCCATTTTCTAGACT 58.014 39.130 0.00 0.00 0.00 3.24
1145 1174 4.161295 CGGGCCGGAAGATCTGCA 62.161 66.667 20.56 0.00 0.00 4.41
1236 1265 3.090532 GCGGTTCCTGGGGAGGAT 61.091 66.667 0.00 0.00 37.87 3.24
1237 1266 2.911143 CGGTTCCTGGGGAGGATG 59.089 66.667 0.00 0.00 37.87 3.51
1238 1267 1.689233 CGGTTCCTGGGGAGGATGA 60.689 63.158 0.00 0.00 37.87 2.92
1243 1272 4.227134 CTGGGGAGGATGACGGCG 62.227 72.222 4.80 4.80 0.00 6.46
1488 1556 0.567182 AGATGGAGGAGATGAGGGCT 59.433 55.000 0.00 0.00 0.00 5.19
1492 1560 3.160047 AGGAGATGAGGGCTGCCG 61.160 66.667 13.40 0.00 0.00 5.69
1636 1707 1.376609 ATCGCCCGTTGGAGAATTGC 61.377 55.000 0.00 0.00 44.14 3.56
1637 1708 2.885113 GCCCGTTGGAGAATTGCC 59.115 61.111 0.00 0.00 0.00 4.52
1638 1709 1.678970 GCCCGTTGGAGAATTGCCT 60.679 57.895 0.00 0.00 0.00 4.75
1639 1710 0.393808 GCCCGTTGGAGAATTGCCTA 60.394 55.000 0.00 0.00 0.00 3.93
1640 1711 1.750682 GCCCGTTGGAGAATTGCCTAT 60.751 52.381 0.00 0.00 0.00 2.57
1641 1712 2.654863 CCCGTTGGAGAATTGCCTATT 58.345 47.619 0.00 0.00 0.00 1.73
1642 1713 2.358898 CCCGTTGGAGAATTGCCTATTG 59.641 50.000 0.00 0.00 0.00 1.90
1643 1714 2.358898 CCGTTGGAGAATTGCCTATTGG 59.641 50.000 0.00 0.00 0.00 3.16
1644 1715 3.278574 CGTTGGAGAATTGCCTATTGGA 58.721 45.455 0.00 0.00 34.57 3.53
1645 1716 3.313526 CGTTGGAGAATTGCCTATTGGAG 59.686 47.826 0.00 0.00 34.57 3.86
1646 1717 4.526970 GTTGGAGAATTGCCTATTGGAGA 58.473 43.478 0.00 0.00 34.57 3.71
1647 1718 4.860802 TGGAGAATTGCCTATTGGAGAA 57.139 40.909 0.00 0.00 34.57 2.87
1648 1719 5.393068 TGGAGAATTGCCTATTGGAGAAT 57.607 39.130 0.00 0.00 34.57 2.40
1649 1720 5.769835 TGGAGAATTGCCTATTGGAGAATT 58.230 37.500 0.00 0.58 32.79 2.17
1650 1721 5.595542 TGGAGAATTGCCTATTGGAGAATTG 59.404 40.000 0.00 0.00 31.29 2.32
1656 1727 1.679139 CTATTGGAGAATTGGCGGCA 58.321 50.000 7.97 7.97 0.00 5.69
1659 1730 3.140814 GGAGAATTGGCGGCACCC 61.141 66.667 12.92 3.48 37.83 4.61
1761 1832 1.594310 GCTGGGAGAGACGCTTCTT 59.406 57.895 0.00 0.00 29.47 2.52
1824 1895 0.034670 ACTCTTCTGATGGGGCAAGC 60.035 55.000 0.00 0.00 0.00 4.01
1971 2042 2.301870 ACAGACATGCTCCGAAACCTTA 59.698 45.455 0.00 0.00 0.00 2.69
2334 2405 0.616371 CTTATGGGGTTCGTGGGTCA 59.384 55.000 0.00 0.00 0.00 4.02
2399 2470 7.232994 GCATCTGCTAAAGAAATCGATATCAC 58.767 38.462 0.00 0.00 38.79 3.06
2440 2511 6.730447 TCCAATTTTGAGGACATGGAGAATA 58.270 36.000 0.00 0.00 33.30 1.75
2461 2532 3.074412 ACATCAAAGGTGAAACGCCTAG 58.926 45.455 4.27 1.65 44.35 3.02
2760 2834 5.235850 TGGAGTGCAGGTACTTTTGATTA 57.764 39.130 0.00 0.00 34.60 1.75
2823 2897 5.878332 TCGTGACAATAAATTGACTGCAT 57.122 34.783 9.60 0.00 40.14 3.96
3040 3114 4.156556 TCAGAATGTAAGTTGCATTGCCTC 59.843 41.667 21.86 9.15 36.77 4.70
3111 3185 5.836821 TCAGTACAGTAGTGAGCTATTGG 57.163 43.478 13.35 0.00 38.68 3.16
3122 3196 2.509548 TGAGCTATTGGTGGGCATTAGT 59.490 45.455 0.00 0.00 0.00 2.24
3149 3223 6.258947 GCAGTTATGATACCTTCTTGAAGACC 59.741 42.308 11.53 0.00 0.00 3.85
3159 3233 3.895232 TCTTGAAGACCTGCTGGATAC 57.105 47.619 17.64 7.30 37.04 2.24
3163 3237 0.905357 AAGACCTGCTGGATACGCTT 59.095 50.000 17.64 8.30 42.51 4.68
3178 3252 7.471721 TGGATACGCTTTTGAAATATGTGAAG 58.528 34.615 0.00 0.00 42.51 3.02
3221 3297 6.017770 CACCAGTTTCTAGATCTCCGTACTAG 60.018 46.154 0.00 0.00 36.10 2.57
3225 3301 8.550376 CAGTTTCTAGATCTCCGTACTAGTAAC 58.450 40.741 3.61 0.00 40.90 2.50
3251 3328 4.998671 TTTTCCTTGTTGCAGATTGTCA 57.001 36.364 0.00 0.00 0.00 3.58
3380 3457 0.036732 AAGGCGACAAAGGCTCATGA 59.963 50.000 7.20 0.00 46.87 3.07
3468 3545 2.384382 GTTGAAGGTGACATTGTTGCG 58.616 47.619 0.00 0.00 0.00 4.85
3470 3547 0.387239 GAAGGTGACATTGTTGCGGC 60.387 55.000 0.00 0.00 0.00 6.53
3570 3647 0.674581 CTCACTGCGATGCCCAAGAA 60.675 55.000 0.00 0.00 0.00 2.52
3639 3716 7.441017 AGAATCTAGATGTATCAACTGAAGGC 58.559 38.462 5.86 0.00 0.00 4.35
3699 3776 1.527433 GAAACACTGAAGGCCCCAGC 61.527 60.000 19.41 2.95 35.14 4.85
3727 3804 3.423539 AACCAGAAGCAGCTGTTATCA 57.576 42.857 16.64 0.00 34.06 2.15
3736 3813 5.102953 AGCAGCTGTTATCAAACATCCTA 57.897 39.130 16.64 0.00 44.43 2.94
3780 3857 3.463048 AAAGTTGAATCTGGAGGGCAT 57.537 42.857 0.00 0.00 0.00 4.40
3781 3858 2.431954 AGTTGAATCTGGAGGGCATG 57.568 50.000 0.00 0.00 0.00 4.06
3966 4043 5.123227 GCTAGCATTATTACAGGTGTGGAA 58.877 41.667 10.63 0.00 0.00 3.53
4335 4412 5.640189 ATGCTTCAACAGAAAAGGAGATG 57.360 39.130 0.00 0.00 0.00 2.90
4537 4614 1.130561 GTGGTTATGGCGCTGTTCTTC 59.869 52.381 7.64 0.00 0.00 2.87
4600 4677 5.772825 TGTAACTGAAGTAACGTACAGGT 57.227 39.130 0.00 0.00 35.08 4.00
4605 4682 4.765856 ACTGAAGTAACGTACAGGTCTGAT 59.234 41.667 4.84 0.00 35.08 2.90
4673 4750 4.154737 CACTTCGAATGGAGCTGAATTTGA 59.845 41.667 0.00 0.00 0.00 2.69
4681 4758 3.267812 TGGAGCTGAATTTGAGGGAGATT 59.732 43.478 0.00 0.00 0.00 2.40
4707 4784 3.390967 TGTTGATCACTGTTCCTCTTGGA 59.609 43.478 0.00 0.00 41.36 3.53
4911 4988 8.653338 CAATGCTTTATGTTTTGGAATCTCAAG 58.347 33.333 0.00 0.00 0.00 3.02
4975 5052 2.255406 AGGCTGCTATAGATGGACAGG 58.745 52.381 3.21 0.00 0.00 4.00
5022 5099 0.179045 ATGCTATGGTGGTTCTCCGC 60.179 55.000 0.00 0.00 42.95 5.54
5076 5153 0.730265 TGGCGTCAGTTGTCACAAAC 59.270 50.000 0.00 0.00 0.00 2.93
5343 5420 4.141846 ACATACCAAGTGCAGTCAGATAGG 60.142 45.833 0.00 0.00 0.00 2.57
5559 5636 2.355756 TGCTCTTAAATCATTCGCTGGC 59.644 45.455 0.00 0.00 0.00 4.85
5572 5649 0.250513 CGCTGGCTCTAAAGAAGGGT 59.749 55.000 0.00 0.00 0.00 4.34
5642 5719 7.568199 AACTTATTATTTACGCAGCAGGATT 57.432 32.000 0.00 0.00 0.00 3.01
5646 5723 5.744666 TTATTTACGCAGCAGGATTAACC 57.255 39.130 0.00 0.00 39.35 2.85
5677 5754 5.620206 TCTTACATTCAACTCTTTGGCTCA 58.380 37.500 0.00 0.00 33.06 4.26
5818 5895 4.816925 GCATCACTCCAATCCCTTTACTAC 59.183 45.833 0.00 0.00 0.00 2.73
5819 5896 5.396884 GCATCACTCCAATCCCTTTACTACT 60.397 44.000 0.00 0.00 0.00 2.57
5820 5897 5.934402 TCACTCCAATCCCTTTACTACTC 57.066 43.478 0.00 0.00 0.00 2.59
5821 5898 4.715297 TCACTCCAATCCCTTTACTACTCC 59.285 45.833 0.00 0.00 0.00 3.85
5822 5899 4.038633 ACTCCAATCCCTTTACTACTCCC 58.961 47.826 0.00 0.00 0.00 4.30
5823 5900 4.265353 ACTCCAATCCCTTTACTACTCCCT 60.265 45.833 0.00 0.00 0.00 4.20
5824 5901 4.296056 TCCAATCCCTTTACTACTCCCTC 58.704 47.826 0.00 0.00 0.00 4.30
5825 5902 3.391626 CCAATCCCTTTACTACTCCCTCC 59.608 52.174 0.00 0.00 0.00 4.30
5826 5903 4.037927 CAATCCCTTTACTACTCCCTCCA 58.962 47.826 0.00 0.00 0.00 3.86
5827 5904 4.578149 ATCCCTTTACTACTCCCTCCAT 57.422 45.455 0.00 0.00 0.00 3.41
5828 5905 5.698369 ATCCCTTTACTACTCCCTCCATA 57.302 43.478 0.00 0.00 0.00 2.74
5829 5906 5.492565 TCCCTTTACTACTCCCTCCATAA 57.507 43.478 0.00 0.00 0.00 1.90
5830 5907 5.857134 TCCCTTTACTACTCCCTCCATAAA 58.143 41.667 0.00 0.00 0.00 1.40
5831 5908 5.664457 TCCCTTTACTACTCCCTCCATAAAC 59.336 44.000 0.00 0.00 0.00 2.01
5832 5909 5.666265 CCCTTTACTACTCCCTCCATAAACT 59.334 44.000 0.00 0.00 0.00 2.66
5833 5910 6.842807 CCCTTTACTACTCCCTCCATAAACTA 59.157 42.308 0.00 0.00 0.00 2.24
5834 5911 7.346436 CCCTTTACTACTCCCTCCATAAACTAA 59.654 40.741 0.00 0.00 0.00 2.24
5835 5912 8.935741 CCTTTACTACTCCCTCCATAAACTAAT 58.064 37.037 0.00 0.00 0.00 1.73
5843 5920 8.817876 ACTCCCTCCATAAACTAATATAAGAGC 58.182 37.037 0.00 0.00 0.00 4.09
5844 5921 7.837863 TCCCTCCATAAACTAATATAAGAGCG 58.162 38.462 0.00 0.00 0.00 5.03
5845 5922 7.453752 TCCCTCCATAAACTAATATAAGAGCGT 59.546 37.037 0.00 0.00 0.00 5.07
5846 5923 8.095169 CCCTCCATAAACTAATATAAGAGCGTT 58.905 37.037 0.00 0.00 0.00 4.84
5847 5924 9.490379 CCTCCATAAACTAATATAAGAGCGTTT 57.510 33.333 0.00 0.00 0.00 3.60
5897 5974 8.777578 TGCTCTTATATTAGTTTACAGAGGGA 57.222 34.615 0.00 0.00 0.00 4.20
5898 5975 8.861086 TGCTCTTATATTAGTTTACAGAGGGAG 58.139 37.037 0.00 0.00 0.00 4.30
5899 5976 8.862085 GCTCTTATATTAGTTTACAGAGGGAGT 58.138 37.037 0.00 0.00 0.00 3.85
5958 6035 1.592669 CGTTGCTCCGATGCTAGGG 60.593 63.158 0.00 0.00 0.00 3.53
5964 6041 0.833834 CTCCGATGCTAGGGTGGGAT 60.834 60.000 0.00 0.00 0.00 3.85
6107 6189 9.565090 AATAGAGCTTATTTATGCAATGTCAGA 57.435 29.630 0.00 0.00 0.00 3.27
6108 6190 7.256756 AGAGCTTATTTATGCAATGTCAGAC 57.743 36.000 0.00 0.00 0.00 3.51
6325 6407 3.385193 TCAGTTGAATCGAGCAAGACA 57.615 42.857 3.97 0.00 0.00 3.41
6327 6409 4.126437 TCAGTTGAATCGAGCAAGACAAA 58.874 39.130 3.97 0.00 0.00 2.83
6384 6466 2.653726 TGTGACAAATGAAGCAGGTGT 58.346 42.857 0.00 0.00 0.00 4.16
6462 6544 7.626452 GCCTGACAAGGTTGTGAAATTATCTAC 60.626 40.741 0.00 0.00 46.43 2.59
6493 6575 0.725686 CAAAGTCTGATGGCAGCTCG 59.274 55.000 3.69 0.00 42.01 5.03
6523 6605 2.439409 CAGAAGCAACACCATGATCCA 58.561 47.619 0.00 0.00 0.00 3.41
6532 6614 2.109834 ACACCATGATCCAGAACCCAAA 59.890 45.455 0.00 0.00 0.00 3.28
6533 6615 3.164268 CACCATGATCCAGAACCCAAAA 58.836 45.455 0.00 0.00 0.00 2.44
6535 6617 2.164219 CCATGATCCAGAACCCAAAACG 59.836 50.000 0.00 0.00 0.00 3.60
6608 6690 3.485431 CTGCTCGAGTTGCTGCCG 61.485 66.667 15.13 0.00 0.00 5.69
6644 6726 5.293569 CAGGTTCGTCAGTAACACTTTCTTT 59.706 40.000 0.00 0.00 0.00 2.52
6645 6727 5.293569 AGGTTCGTCAGTAACACTTTCTTTG 59.706 40.000 0.00 0.00 0.00 2.77
6720 6802 9.803507 ATTGATGAAGATATGTATGTTGGTCAT 57.196 29.630 0.00 0.00 40.25 3.06
6750 6832 2.418368 TTGAGGTTGTCAGCAGTTGT 57.582 45.000 0.00 0.00 36.21 3.32
6751 6833 3.552132 TTGAGGTTGTCAGCAGTTGTA 57.448 42.857 0.00 0.00 36.21 2.41
6752 6834 2.833794 TGAGGTTGTCAGCAGTTGTAC 58.166 47.619 0.00 0.00 0.00 2.90
6753 6835 2.169561 TGAGGTTGTCAGCAGTTGTACA 59.830 45.455 0.00 0.00 0.00 2.90
6754 6836 3.181455 TGAGGTTGTCAGCAGTTGTACAT 60.181 43.478 0.00 0.00 0.00 2.29
6755 6837 4.039852 TGAGGTTGTCAGCAGTTGTACATA 59.960 41.667 0.00 0.00 0.00 2.29
6756 6838 5.165961 AGGTTGTCAGCAGTTGTACATAT 57.834 39.130 0.00 0.00 0.00 1.78
6757 6839 6.071051 TGAGGTTGTCAGCAGTTGTACATATA 60.071 38.462 0.00 0.00 0.00 0.86
6814 6896 6.183347 AGAAATTCTACTTTCTGATGGTGGG 58.817 40.000 0.00 0.00 42.43 4.61
6842 6924 8.197439 CCAGAATAAACAAACCTTTTTCTGTCT 58.803 33.333 11.93 0.00 37.80 3.41
6874 6956 7.872163 TGAAATGTGCATTTTCAACTACATC 57.128 32.000 19.53 0.00 40.77 3.06
6926 7008 6.663093 TGATATCTTATTGGCTTGTTGGTTGT 59.337 34.615 3.98 0.00 0.00 3.32
6929 7011 2.618442 ATTGGCTTGTTGGTTGTTGG 57.382 45.000 0.00 0.00 0.00 3.77
6937 7019 4.358851 CTTGTTGGTTGTTGGTGTACATG 58.641 43.478 0.00 0.00 0.00 3.21
6940 7022 4.109050 GTTGGTTGTTGGTGTACATGTTG 58.891 43.478 2.30 0.00 0.00 3.33
6943 7025 4.142359 TGGTTGTTGGTGTACATGTTGTTC 60.142 41.667 2.30 0.00 0.00 3.18
6959 7041 7.703621 ACATGTTGTTCAGACTTTTCATTTCTG 59.296 33.333 0.00 0.00 38.52 3.02
7051 7133 2.095059 AGATTTTGCAAGGCGTGATCAC 60.095 45.455 16.21 16.21 0.00 3.06
7120 7202 4.776435 TGGGAGACTTGAATGCATATCA 57.224 40.909 0.00 3.47 0.00 2.15
7294 7376 1.821753 GCAGAGAGTGGAGCTGTAGAA 59.178 52.381 0.00 0.00 32.39 2.10
7300 7382 1.546476 AGTGGAGCTGTAGAAAGTCGG 59.454 52.381 0.00 0.00 0.00 4.79
7422 7504 9.132923 AGATAAAGAATTCTACAGTCGGATACA 57.867 33.333 8.75 0.00 0.00 2.29
7440 7522 5.071788 GGATACACATACCCATGGAAGAAGA 59.928 44.000 15.22 0.00 36.39 2.87
7549 7631 6.602009 GTGTAGAACATATAAAACAGGGGCTT 59.398 38.462 0.00 0.00 0.00 4.35
7650 7732 3.502211 CGGAAAGCTGTCACAAAGGTATT 59.498 43.478 6.17 0.00 0.00 1.89
7651 7733 4.613622 CGGAAAGCTGTCACAAAGGTATTG 60.614 45.833 6.17 0.00 0.00 1.90
7671 7753 5.617528 TTGTACACACCCTTTCTGAACTA 57.382 39.130 0.00 0.00 0.00 2.24
7672 7754 5.209818 TGTACACACCCTTTCTGAACTAG 57.790 43.478 0.00 0.00 0.00 2.57
7673 7755 4.652421 TGTACACACCCTTTCTGAACTAGT 59.348 41.667 0.00 0.00 0.00 2.57
7674 7756 4.338379 ACACACCCTTTCTGAACTAGTC 57.662 45.455 0.00 0.00 0.00 2.59
7675 7757 3.071167 ACACACCCTTTCTGAACTAGTCC 59.929 47.826 0.00 0.00 0.00 3.85
7676 7758 2.638363 ACACCCTTTCTGAACTAGTCCC 59.362 50.000 0.00 0.00 0.00 4.46
7677 7759 2.907042 CACCCTTTCTGAACTAGTCCCT 59.093 50.000 0.00 0.00 0.00 4.20
7678 7760 3.055747 CACCCTTTCTGAACTAGTCCCTC 60.056 52.174 0.00 0.00 0.00 4.30
7679 7761 2.502130 CCCTTTCTGAACTAGTCCCTCC 59.498 54.545 0.00 0.00 0.00 4.30
7680 7762 3.173965 CCTTTCTGAACTAGTCCCTCCA 58.826 50.000 0.00 0.00 0.00 3.86
7681 7763 3.777522 CCTTTCTGAACTAGTCCCTCCAT 59.222 47.826 0.00 0.00 0.00 3.41
7682 7764 4.226168 CCTTTCTGAACTAGTCCCTCCATT 59.774 45.833 0.00 0.00 0.00 3.16
7683 7765 5.422214 TTTCTGAACTAGTCCCTCCATTC 57.578 43.478 0.00 0.00 0.00 2.67
7684 7766 3.375699 TCTGAACTAGTCCCTCCATTCC 58.624 50.000 0.00 0.00 0.00 3.01
7685 7767 3.012959 TCTGAACTAGTCCCTCCATTCCT 59.987 47.826 0.00 0.00 0.00 3.36
7686 7768 4.232122 TCTGAACTAGTCCCTCCATTCCTA 59.768 45.833 0.00 0.00 0.00 2.94
7687 7769 4.955335 TGAACTAGTCCCTCCATTCCTAA 58.045 43.478 0.00 0.00 0.00 2.69
7688 7770 5.347124 TGAACTAGTCCCTCCATTCCTAAA 58.653 41.667 0.00 0.00 0.00 1.85
7689 7771 5.970640 TGAACTAGTCCCTCCATTCCTAAAT 59.029 40.000 0.00 0.00 0.00 1.40
7690 7772 7.136885 TGAACTAGTCCCTCCATTCCTAAATA 58.863 38.462 0.00 0.00 0.00 1.40
7691 7773 7.794683 TGAACTAGTCCCTCCATTCCTAAATAT 59.205 37.037 0.00 0.00 0.00 1.28
7692 7774 9.322769 GAACTAGTCCCTCCATTCCTAAATATA 57.677 37.037 0.00 0.00 0.00 0.86
7693 7775 9.684702 AACTAGTCCCTCCATTCCTAAATATAA 57.315 33.333 0.00 0.00 0.00 0.98
7694 7776 9.327731 ACTAGTCCCTCCATTCCTAAATATAAG 57.672 37.037 0.00 0.00 0.00 1.73
7695 7777 9.327731 CTAGTCCCTCCATTCCTAAATATAAGT 57.672 37.037 0.00 0.00 0.00 2.24
7696 7778 8.208575 AGTCCCTCCATTCCTAAATATAAGTC 57.791 38.462 0.00 0.00 0.00 3.01
7697 7779 7.237887 AGTCCCTCCATTCCTAAATATAAGTCC 59.762 40.741 0.00 0.00 0.00 3.85
7698 7780 7.237887 GTCCCTCCATTCCTAAATATAAGTCCT 59.762 40.741 0.00 0.00 0.00 3.85
7699 7781 7.799583 TCCCTCCATTCCTAAATATAAGTCCTT 59.200 37.037 0.00 0.00 0.00 3.36
7700 7782 8.448816 CCCTCCATTCCTAAATATAAGTCCTTT 58.551 37.037 0.00 0.00 0.00 3.11
7701 7783 9.868160 CCTCCATTCCTAAATATAAGTCCTTTT 57.132 33.333 0.00 0.00 0.00 2.27
7720 7802 9.886132 GTCCTTTTAGAGATTCCACTATAAACA 57.114 33.333 0.00 0.00 34.69 2.83
7721 7803 9.886132 TCCTTTTAGAGATTCCACTATAAACAC 57.114 33.333 0.00 0.00 34.69 3.32
7722 7804 9.892130 CCTTTTAGAGATTCCACTATAAACACT 57.108 33.333 0.00 0.00 34.69 3.55
7729 7811 8.873215 AGATTCCACTATAAACACTACATTCG 57.127 34.615 0.00 0.00 0.00 3.34
7730 7812 7.926555 AGATTCCACTATAAACACTACATTCGG 59.073 37.037 0.00 0.00 0.00 4.30
7731 7813 6.778834 TCCACTATAAACACTACATTCGGA 57.221 37.500 0.00 0.00 0.00 4.55
7732 7814 7.356089 TCCACTATAAACACTACATTCGGAT 57.644 36.000 0.00 0.00 0.00 4.18
7733 7815 7.207383 TCCACTATAAACACTACATTCGGATG 58.793 38.462 0.88 0.88 39.25 3.51
7735 7817 8.139350 CCACTATAAACACTACATTCGGATGTA 58.861 37.037 15.76 15.76 44.51 2.29
7736 7818 9.692749 CACTATAAACACTACATTCGGATGTAT 57.307 33.333 16.89 4.68 45.20 2.29
7742 7824 9.909644 AAACACTACATTCGGATGTATATAGAC 57.090 33.333 16.89 0.00 45.20 2.59
7743 7825 8.865420 ACACTACATTCGGATGTATATAGACT 57.135 34.615 16.89 0.00 45.20 3.24
7744 7826 8.948145 ACACTACATTCGGATGTATATAGACTC 58.052 37.037 16.89 0.00 45.20 3.36
7745 7827 8.399425 CACTACATTCGGATGTATATAGACTCC 58.601 40.741 16.89 3.09 45.20 3.85
7746 7828 8.330247 ACTACATTCGGATGTATATAGACTCCT 58.670 37.037 16.89 0.00 45.20 3.69
7747 7829 9.179909 CTACATTCGGATGTATATAGACTCCTT 57.820 37.037 16.89 0.00 45.20 3.36
7748 7830 8.423906 ACATTCGGATGTATATAGACTCCTTT 57.576 34.615 7.81 0.00 44.51 3.11
7749 7831 8.871125 ACATTCGGATGTATATAGACTCCTTTT 58.129 33.333 7.81 0.00 44.51 2.27
7752 7834 9.803507 TTCGGATGTATATAGACTCCTTTTAGA 57.196 33.333 11.63 2.64 0.00 2.10
7753 7835 9.451002 TCGGATGTATATAGACTCCTTTTAGAG 57.549 37.037 11.63 0.00 39.91 2.43
7764 7846 6.051179 ACTCCTTTTAGAGTATGGGTTCAC 57.949 41.667 0.00 0.00 45.31 3.18
7765 7847 5.045797 ACTCCTTTTAGAGTATGGGTTCACC 60.046 44.000 0.00 0.00 45.31 4.02
7777 7859 0.243636 GGTTCACCCATTTTGCTCCG 59.756 55.000 0.00 0.00 0.00 4.63
7778 7860 0.243636 GTTCACCCATTTTGCTCCGG 59.756 55.000 0.00 0.00 0.00 5.14
7779 7861 0.111446 TTCACCCATTTTGCTCCGGA 59.889 50.000 2.93 2.93 0.00 5.14
7780 7862 0.331278 TCACCCATTTTGCTCCGGAT 59.669 50.000 3.57 0.00 0.00 4.18
7781 7863 0.457035 CACCCATTTTGCTCCGGATG 59.543 55.000 3.57 0.00 0.00 3.51
7782 7864 0.039618 ACCCATTTTGCTCCGGATGT 59.960 50.000 3.57 0.00 0.00 3.06
7783 7865 1.283613 ACCCATTTTGCTCCGGATGTA 59.716 47.619 3.57 0.00 0.00 2.29
7784 7866 1.949525 CCCATTTTGCTCCGGATGTAG 59.050 52.381 3.57 0.00 0.00 2.74
7785 7867 2.643551 CCATTTTGCTCCGGATGTAGT 58.356 47.619 3.57 0.00 0.00 2.73
7786 7868 2.614057 CCATTTTGCTCCGGATGTAGTC 59.386 50.000 3.57 0.00 0.00 2.59
7787 7869 3.535561 CATTTTGCTCCGGATGTAGTCT 58.464 45.455 3.57 0.00 0.00 3.24
7788 7870 4.442893 CCATTTTGCTCCGGATGTAGTCTA 60.443 45.833 3.57 0.00 0.00 2.59
7789 7871 5.300752 CATTTTGCTCCGGATGTAGTCTAT 58.699 41.667 3.57 0.00 0.00 1.98
7790 7872 6.455647 CATTTTGCTCCGGATGTAGTCTATA 58.544 40.000 3.57 0.00 0.00 1.31
7791 7873 5.707242 TTTGCTCCGGATGTAGTCTATAG 57.293 43.478 3.57 0.00 0.00 1.31
7792 7874 4.368565 TGCTCCGGATGTAGTCTATAGT 57.631 45.455 3.57 0.00 0.00 2.12
7793 7875 4.072839 TGCTCCGGATGTAGTCTATAGTG 58.927 47.826 3.57 0.00 0.00 2.74
7794 7876 3.440872 GCTCCGGATGTAGTCTATAGTGG 59.559 52.174 3.57 0.00 0.00 4.00
7795 7877 4.806625 GCTCCGGATGTAGTCTATAGTGGA 60.807 50.000 3.57 0.00 0.00 4.02
7796 7878 5.314529 CTCCGGATGTAGTCTATAGTGGAA 58.685 45.833 3.57 0.00 0.00 3.53
7797 7879 5.888901 TCCGGATGTAGTCTATAGTGGAAT 58.111 41.667 0.00 0.00 0.00 3.01
7798 7880 5.944599 TCCGGATGTAGTCTATAGTGGAATC 59.055 44.000 0.00 0.00 0.00 2.52
7799 7881 5.946972 CCGGATGTAGTCTATAGTGGAATCT 59.053 44.000 0.00 0.00 0.00 2.40
7800 7882 6.094325 CCGGATGTAGTCTATAGTGGAATCTC 59.906 46.154 0.00 0.00 0.00 2.75
7801 7883 6.882140 CGGATGTAGTCTATAGTGGAATCTCT 59.118 42.308 0.00 0.00 0.00 3.10
7802 7884 8.041919 CGGATGTAGTCTATAGTGGAATCTCTA 58.958 40.741 0.00 0.00 0.00 2.43
7803 7885 9.742144 GGATGTAGTCTATAGTGGAATCTCTAA 57.258 37.037 0.00 0.00 0.00 2.10
7809 7891 9.138596 AGTCTATAGTGGAATCTCTAAAAGGAC 57.861 37.037 0.00 0.00 0.00 3.85
7810 7892 9.138596 GTCTATAGTGGAATCTCTAAAAGGACT 57.861 37.037 0.00 0.00 0.00 3.85
7811 7893 9.716556 TCTATAGTGGAATCTCTAAAAGGACTT 57.283 33.333 0.00 0.00 0.00 3.01
7828 7910 9.907229 AAAAGGACTTATATTTAGGAACAGAGG 57.093 33.333 0.00 0.00 0.00 3.69
7829 7911 7.619512 AGGACTTATATTTAGGAACAGAGGG 57.380 40.000 0.00 0.00 0.00 4.30
7830 7912 7.371043 AGGACTTATATTTAGGAACAGAGGGA 58.629 38.462 0.00 0.00 0.00 4.20
7831 7913 7.511028 AGGACTTATATTTAGGAACAGAGGGAG 59.489 40.741 0.00 0.00 0.00 4.30
7832 7914 7.290481 GGACTTATATTTAGGAACAGAGGGAGT 59.710 40.741 0.00 0.00 0.00 3.85
7833 7915 9.364653 GACTTATATTTAGGAACAGAGGGAGTA 57.635 37.037 0.00 0.00 0.00 2.59
7838 7920 7.604657 ATTTAGGAACAGAGGGAGTAGTATG 57.395 40.000 0.00 0.00 0.00 2.39
7912 7997 4.820894 AGGGGTGTTGAACTGTAGATAC 57.179 45.455 0.00 0.00 0.00 2.24
7973 8066 5.412594 TCCATCTGTGTTGCTCTATTTTGTC 59.587 40.000 0.00 0.00 0.00 3.18
7976 8069 5.368145 TCTGTGTTGCTCTATTTTGTCAGT 58.632 37.500 0.00 0.00 0.00 3.41
7984 8077 9.899226 GTTGCTCTATTTTGTCAGTCTTATTTT 57.101 29.630 0.00 0.00 0.00 1.82
8008 8101 5.301551 TCATTAGCCTTTTTCTGCTTGTTCA 59.698 36.000 0.00 0.00 39.00 3.18
8011 8104 3.067320 AGCCTTTTTCTGCTTGTTCAGAC 59.933 43.478 0.00 0.00 42.27 3.51
8014 8107 5.039333 CCTTTTTCTGCTTGTTCAGACTTG 58.961 41.667 0.00 0.00 42.27 3.16
8048 8141 7.435488 GTGCATTAGGTCATGTAGTGTAAGTAG 59.565 40.741 0.00 0.00 0.00 2.57
8049 8142 7.123697 TGCATTAGGTCATGTAGTGTAAGTAGT 59.876 37.037 0.00 0.00 0.00 2.73
8050 8143 8.627403 GCATTAGGTCATGTAGTGTAAGTAGTA 58.373 37.037 0.00 0.00 0.00 1.82
8055 8148 8.848182 AGGTCATGTAGTGTAAGTAGTAATAGC 58.152 37.037 0.00 0.00 0.00 2.97
8062 8155 7.098074 AGTGTAAGTAGTAATAGCACTGACC 57.902 40.000 6.29 0.00 34.87 4.02
8064 8157 4.650754 AAGTAGTAATAGCACTGACCGG 57.349 45.455 0.00 0.00 0.00 5.28
8066 8159 4.785301 AGTAGTAATAGCACTGACCGGTA 58.215 43.478 7.34 0.00 0.00 4.02
8071 8164 5.773680 AGTAATAGCACTGACCGGTATATGT 59.226 40.000 7.34 0.57 0.00 2.29
8075 8168 3.055385 AGCACTGACCGGTATATGTTTGT 60.055 43.478 7.34 0.00 0.00 2.83
8092 8185 4.816385 TGTTTGTTCTGGTCTCAACAGATC 59.184 41.667 0.00 0.00 43.82 2.75
8110 8203 1.461559 TCATTGATGCATGCACCGAA 58.538 45.000 25.37 15.95 0.00 4.30
8216 8309 4.803098 TTTCAGACTCTACCTTACTGGC 57.197 45.455 0.00 0.00 40.22 4.85
8217 8310 3.451402 TCAGACTCTACCTTACTGGCA 57.549 47.619 0.00 0.00 40.22 4.92
8221 8314 5.248477 TCAGACTCTACCTTACTGGCATTTT 59.752 40.000 0.00 0.00 40.22 1.82
8334 8427 6.586868 TTTAAATGCAGAAAACTTGCTGTG 57.413 33.333 0.00 0.00 42.02 3.66
8367 8460 5.748670 AAGTTTTAACCCTTGGTGTGTTT 57.251 34.783 0.00 0.00 35.34 2.83
8401 8494 6.035327 GCAGATTCAAACATTTGTGGATAAGC 59.965 38.462 4.36 0.00 39.18 3.09
8488 8581 5.375417 TGTTACATGTGGAGAAGCAAATG 57.625 39.130 9.11 0.00 0.00 2.32
8555 8648 4.202567 TGGGACCTAAAAGAAGCAGACATT 60.203 41.667 0.00 0.00 0.00 2.71
8559 8652 6.076981 ACCTAAAAGAAGCAGACATTGTTG 57.923 37.500 0.00 0.00 0.00 3.33
8560 8653 5.827797 ACCTAAAAGAAGCAGACATTGTTGA 59.172 36.000 0.00 0.00 0.00 3.18
8561 8654 6.491403 ACCTAAAAGAAGCAGACATTGTTGAT 59.509 34.615 0.00 0.00 0.00 2.57
8562 8655 7.665559 ACCTAAAAGAAGCAGACATTGTTGATA 59.334 33.333 0.00 0.00 0.00 2.15
8563 8656 8.680903 CCTAAAAGAAGCAGACATTGTTGATAT 58.319 33.333 0.00 0.00 0.00 1.63
8564 8657 9.713740 CTAAAAGAAGCAGACATTGTTGATATC 57.286 33.333 0.00 0.00 0.00 1.63
8565 8658 7.692460 AAAGAAGCAGACATTGTTGATATCA 57.308 32.000 0.00 0.00 0.00 2.15
8569 8662 5.121811 AGCAGACATTGTTGATATCACCTC 58.878 41.667 4.48 0.07 0.00 3.85
8570 8663 4.274459 GCAGACATTGTTGATATCACCTCC 59.726 45.833 4.48 0.00 0.00 4.30
8571 8664 5.430886 CAGACATTGTTGATATCACCTCCA 58.569 41.667 4.48 0.00 0.00 3.86
8572 8665 6.060136 CAGACATTGTTGATATCACCTCCAT 58.940 40.000 4.48 0.00 0.00 3.41
8573 8666 6.204301 CAGACATTGTTGATATCACCTCCATC 59.796 42.308 4.48 0.33 0.00 3.51
8574 8667 6.005066 ACATTGTTGATATCACCTCCATCA 57.995 37.500 4.48 0.00 0.00 3.07
8575 8668 6.607970 ACATTGTTGATATCACCTCCATCAT 58.392 36.000 4.48 0.00 0.00 2.45
8576 8669 6.713903 ACATTGTTGATATCACCTCCATCATC 59.286 38.462 4.48 0.00 0.00 2.92
8578 8671 6.443995 TGTTGATATCACCTCCATCATCAT 57.556 37.500 4.48 0.00 0.00 2.45
8579 8672 6.470278 TGTTGATATCACCTCCATCATCATC 58.530 40.000 4.48 0.00 0.00 2.92
8580 8673 6.043474 TGTTGATATCACCTCCATCATCATCA 59.957 38.462 4.48 0.00 0.00 3.07
8581 8674 6.886178 TGATATCACCTCCATCATCATCAT 57.114 37.500 0.00 0.00 0.00 2.45
8582 8675 6.885922 TGATATCACCTCCATCATCATCATC 58.114 40.000 0.00 0.00 0.00 2.92
8584 8677 5.780958 ATCACCTCCATCATCATCATCAT 57.219 39.130 0.00 0.00 0.00 2.45
8586 8679 4.595781 TCACCTCCATCATCATCATCATCA 59.404 41.667 0.00 0.00 0.00 3.07
8587 8680 5.250774 TCACCTCCATCATCATCATCATCAT 59.749 40.000 0.00 0.00 0.00 2.45
8588 8681 5.586643 CACCTCCATCATCATCATCATCATC 59.413 44.000 0.00 0.00 0.00 2.92
8590 8683 5.416271 TCCATCATCATCATCATCATCGT 57.584 39.130 0.00 0.00 0.00 3.73
8591 8684 5.801380 TCCATCATCATCATCATCATCGTT 58.199 37.500 0.00 0.00 0.00 3.85
8593 8686 5.642063 CCATCATCATCATCATCATCGTTCA 59.358 40.000 0.00 0.00 0.00 3.18
8594 8687 6.316390 CCATCATCATCATCATCATCGTTCAT 59.684 38.462 0.00 0.00 0.00 2.57
8595 8688 7.494625 CCATCATCATCATCATCATCGTTCATA 59.505 37.037 0.00 0.00 0.00 2.15
8596 8689 8.543774 CATCATCATCATCATCATCGTTCATAG 58.456 37.037 0.00 0.00 0.00 2.23
8597 8690 7.833786 TCATCATCATCATCATCGTTCATAGA 58.166 34.615 0.00 0.00 0.00 1.98
8734 8830 5.647658 AGTGAACTTGTGTGATGAGTTGAAA 59.352 36.000 0.00 0.00 34.02 2.69
8790 8886 4.863548 TCTGGGATGAATTCAAGCATTCT 58.136 39.130 13.09 0.00 34.66 2.40
8943 9039 3.169908 TGTTGTACAGACCATAGCTCCA 58.830 45.455 0.00 0.00 0.00 3.86
8998 9095 1.122849 GTCGTGTTAAAGTCGTCGCA 58.877 50.000 0.00 0.00 0.00 5.10
9031 9128 1.181098 GGTTGGCATCTGCAGGTTGT 61.181 55.000 15.13 0.00 44.36 3.32
9080 9182 7.499232 GCTTATACTGGTCACCATTTATGACTT 59.501 37.037 0.00 0.00 44.88 3.01
9081 9183 9.396022 CTTATACTGGTCACCATTTATGACTTT 57.604 33.333 0.00 0.00 44.88 2.66
9126 9228 9.764363 AAAAGAAGTTATGATTTTCCTCCAAAC 57.236 29.630 0.00 0.00 0.00 2.93
9157 9259 4.864704 TTTTTCCTCCCTAATGTTGTGC 57.135 40.909 0.00 0.00 0.00 4.57
9191 9293 3.378112 TGGTTCTTGCTGAGTTTTGTCTG 59.622 43.478 0.00 0.00 0.00 3.51
9203 9305 7.113544 GCTGAGTTTTGTCTGTATTTTTACTGC 59.886 37.037 0.00 0.00 0.00 4.40
9206 9308 7.425606 AGTTTTGTCTGTATTTTTACTGCCAG 58.574 34.615 0.00 0.00 0.00 4.85
9212 9314 8.046708 TGTCTGTATTTTTACTGCCAGATATGT 58.953 33.333 0.00 0.00 32.20 2.29
9245 9347 5.358922 TGCCATTATTATGCTTTTGCCTTC 58.641 37.500 0.00 0.00 46.87 3.46
9251 9353 2.730550 ATGCTTTTGCCTTCTTTCCG 57.269 45.000 0.00 0.00 46.87 4.30
9265 9367 0.456221 TTTCCGTTGCGCTTTTTCCA 59.544 45.000 9.73 0.00 0.00 3.53
9266 9368 0.456221 TTCCGTTGCGCTTTTTCCAA 59.544 45.000 9.73 0.00 0.00 3.53
9272 9374 1.238439 TGCGCTTTTTCCAAGAGGAG 58.762 50.000 9.73 0.00 46.74 3.69
9292 9394 4.767409 GGAGTTTGTTTCTTTCTGCCCTAT 59.233 41.667 0.00 0.00 0.00 2.57
9293 9395 5.944007 GGAGTTTGTTTCTTTCTGCCCTATA 59.056 40.000 0.00 0.00 0.00 1.31
9300 9402 6.486657 TGTTTCTTTCTGCCCTATATGTATGC 59.513 38.462 0.00 0.00 0.00 3.14
9301 9403 4.820897 TCTTTCTGCCCTATATGTATGCG 58.179 43.478 0.00 0.00 0.00 4.73
9302 9404 2.672961 TCTGCCCTATATGTATGCGC 57.327 50.000 0.00 0.00 0.00 6.09
9321 9423 0.817634 CGTTGTGTTTCCCAGCTGGA 60.818 55.000 34.91 17.23 43.18 3.86
9328 9430 2.158475 TGTTTCCCAGCTGGATCTTGTT 60.158 45.455 34.91 0.00 44.66 2.83
9329 9431 2.893489 GTTTCCCAGCTGGATCTTGTTT 59.107 45.455 34.91 0.00 44.66 2.83
9330 9432 2.978156 TCCCAGCTGGATCTTGTTTT 57.022 45.000 34.91 0.00 38.61 2.43
9340 9448 5.514274 TGGATCTTGTTTTCTGTGTTTCC 57.486 39.130 0.00 0.00 0.00 3.13
9341 9449 4.036262 TGGATCTTGTTTTCTGTGTTTCCG 59.964 41.667 0.00 0.00 0.00 4.30
9344 9452 1.088306 TGTTTTCTGTGTTTCCGCGT 58.912 45.000 4.92 0.00 0.00 6.01
9349 9457 0.948623 TCTGTGTTTCCGCGTCATGG 60.949 55.000 4.92 0.00 0.00 3.66
9358 9466 2.710902 CGCGTCATGGGAGAGTGGA 61.711 63.158 0.00 0.00 0.00 4.02
9367 9475 4.018141 TCATGGGAGAGTGGAATCATGTTT 60.018 41.667 0.00 0.00 35.07 2.83
9371 9479 4.156739 GGGAGAGTGGAATCATGTTTGAAC 59.843 45.833 0.00 0.00 34.96 3.18
9387 9495 5.877564 TGTTTGAACATGGTTTTTCTTTCCC 59.122 36.000 0.00 0.00 33.17 3.97
9388 9496 5.683876 TTGAACATGGTTTTTCTTTCCCA 57.316 34.783 0.00 0.00 0.00 4.37
9389 9497 5.275067 TGAACATGGTTTTTCTTTCCCAG 57.725 39.130 0.00 0.00 0.00 4.45
9390 9498 4.959210 TGAACATGGTTTTTCTTTCCCAGA 59.041 37.500 0.00 0.00 0.00 3.86
9391 9499 5.068987 TGAACATGGTTTTTCTTTCCCAGAG 59.931 40.000 0.00 0.00 31.12 3.35
9392 9500 4.546674 ACATGGTTTTTCTTTCCCAGAGT 58.453 39.130 0.00 0.00 31.12 3.24
9393 9501 4.342092 ACATGGTTTTTCTTTCCCAGAGTG 59.658 41.667 0.00 0.00 31.12 3.51
9394 9502 2.693074 TGGTTTTTCTTTCCCAGAGTGC 59.307 45.455 0.00 0.00 31.12 4.40
9395 9503 2.693074 GGTTTTTCTTTCCCAGAGTGCA 59.307 45.455 0.00 0.00 31.12 4.57
9396 9504 3.243535 GGTTTTTCTTTCCCAGAGTGCAG 60.244 47.826 0.00 0.00 31.12 4.41
9397 9505 1.609208 TTTCTTTCCCAGAGTGCAGC 58.391 50.000 0.00 0.00 31.12 5.25
9398 9506 0.473755 TTCTTTCCCAGAGTGCAGCA 59.526 50.000 0.00 0.00 31.12 4.41
9399 9507 0.035881 TCTTTCCCAGAGTGCAGCAG 59.964 55.000 0.00 0.00 0.00 4.24
9400 9508 1.584380 CTTTCCCAGAGTGCAGCAGC 61.584 60.000 0.00 0.00 42.57 5.25
9410 9518 4.164252 GCAGCAGCAGCATGTTTC 57.836 55.556 4.63 0.00 45.49 2.78
9411 9519 1.585006 GCAGCAGCAGCATGTTTCT 59.415 52.632 4.63 0.00 45.49 2.52
9412 9520 0.038526 GCAGCAGCAGCATGTTTCTT 60.039 50.000 4.63 0.00 45.49 2.52
9413 9521 1.200716 GCAGCAGCAGCATGTTTCTTA 59.799 47.619 4.63 0.00 45.49 2.10
9414 9522 2.860062 CAGCAGCAGCATGTTTCTTAC 58.140 47.619 3.17 0.00 45.49 2.34
9415 9523 2.486982 CAGCAGCAGCATGTTTCTTACT 59.513 45.455 3.17 0.00 45.49 2.24
9416 9524 3.057736 CAGCAGCAGCATGTTTCTTACTT 60.058 43.478 3.17 0.00 45.49 2.24
9417 9525 3.571401 AGCAGCAGCATGTTTCTTACTTT 59.429 39.130 3.17 0.00 45.49 2.66
9418 9526 3.671928 GCAGCAGCATGTTTCTTACTTTG 59.328 43.478 0.00 0.00 41.58 2.77
9419 9527 4.794003 GCAGCAGCATGTTTCTTACTTTGT 60.794 41.667 0.00 0.00 41.58 2.83
9420 9528 4.678287 CAGCAGCATGTTTCTTACTTTGTG 59.322 41.667 0.00 0.00 39.31 3.33
9421 9529 4.580167 AGCAGCATGTTTCTTACTTTGTGA 59.420 37.500 0.00 0.00 39.31 3.58
9422 9530 5.242393 AGCAGCATGTTTCTTACTTTGTGAT 59.758 36.000 0.00 0.00 39.31 3.06
9423 9531 6.430925 AGCAGCATGTTTCTTACTTTGTGATA 59.569 34.615 0.00 0.00 39.31 2.15
9424 9532 7.121759 AGCAGCATGTTTCTTACTTTGTGATAT 59.878 33.333 0.00 0.00 39.31 1.63
9425 9533 7.756722 GCAGCATGTTTCTTACTTTGTGATATT 59.243 33.333 0.00 0.00 39.31 1.28
9426 9534 9.069078 CAGCATGTTTCTTACTTTGTGATATTG 57.931 33.333 0.00 0.00 0.00 1.90
9427 9535 8.796475 AGCATGTTTCTTACTTTGTGATATTGT 58.204 29.630 0.00 0.00 0.00 2.71
9428 9536 9.065871 GCATGTTTCTTACTTTGTGATATTGTC 57.934 33.333 0.00 0.00 0.00 3.18
9442 9550 9.958180 TTGTGATATTGTCTTATTTTCTCCTGA 57.042 29.630 0.00 0.00 0.00 3.86
9443 9551 9.605275 TGTGATATTGTCTTATTTTCTCCTGAG 57.395 33.333 0.00 0.00 0.00 3.35
9444 9552 9.050601 GTGATATTGTCTTATTTTCTCCTGAGG 57.949 37.037 0.00 0.00 0.00 3.86
9445 9553 8.992349 TGATATTGTCTTATTTTCTCCTGAGGA 58.008 33.333 0.00 0.00 0.00 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 5.039480 ACTTTGAGATTCACGCTCATTTG 57.961 39.130 0.00 0.00 41.60 2.32
41 42 3.325425 TCCGTCATACCCTTTCTTGTTCA 59.675 43.478 0.00 0.00 0.00 3.18
89 90 4.870426 TCGCAATTCTACCACAGAGAAATC 59.130 41.667 0.00 0.00 36.54 2.17
112 113 9.679661 TCACTTTACATACATGTATGGACAATT 57.320 29.630 36.83 23.24 45.36 2.32
131 132 4.518970 GGTCCAATGTCAAAGCTCACTTTA 59.481 41.667 0.00 0.00 44.41 1.85
179 180 2.895372 GGGCCCAACGCTACATCG 60.895 66.667 19.95 0.00 37.74 3.84
211 212 1.167851 CGACGGACCCTAGTAACACA 58.832 55.000 0.00 0.00 0.00 3.72
300 301 4.268359 AGAAGACGGTACCCTAGTAACAG 58.732 47.826 6.25 0.00 35.78 3.16
409 427 4.545610 TGTGTCGTAAAGGTACCGTTAAG 58.454 43.478 20.04 20.82 0.00 1.85
440 458 2.912542 GCTAAAACTACAAGCGCGC 58.087 52.632 26.66 26.66 0.00 6.86
445 463 3.898361 GTGTTTCGCGCTAAAACTACAAG 59.102 43.478 25.67 1.32 37.48 3.16
456 474 4.000557 CGCAGTGTGTTTCGCGCT 62.001 61.111 5.56 0.00 41.38 5.92
468 486 4.008933 GACCAGGGTCTGCGCAGT 62.009 66.667 34.70 16.62 41.57 4.40
494 512 1.154197 GAGACGGTTTGCTGGGTAAC 58.846 55.000 0.00 0.00 0.00 2.50
588 608 2.487762 CGTGTGGTTGATGGTTAATGCT 59.512 45.455 0.00 0.00 0.00 3.79
599 619 0.390603 CGGATTAGGCGTGTGGTTGA 60.391 55.000 0.00 0.00 0.00 3.18
600 620 1.366111 CCGGATTAGGCGTGTGGTTG 61.366 60.000 0.00 0.00 0.00 3.77
601 621 1.078708 CCGGATTAGGCGTGTGGTT 60.079 57.895 0.00 0.00 0.00 3.67
602 622 2.582436 CCGGATTAGGCGTGTGGT 59.418 61.111 0.00 0.00 0.00 4.16
603 623 2.203015 CCCGGATTAGGCGTGTGG 60.203 66.667 0.73 0.00 0.00 4.17
604 624 2.895372 GCCCGGATTAGGCGTGTG 60.895 66.667 0.73 0.00 41.41 3.82
629 649 2.989824 CTGACCGTCGACACCCCT 60.990 66.667 17.16 0.00 0.00 4.79
635 655 1.872679 GCGAATCCTGACCGTCGAC 60.873 63.158 5.18 5.18 35.54 4.20
643 663 0.755079 CCCTGATCTGCGAATCCTGA 59.245 55.000 0.00 0.00 0.00 3.86
645 665 1.415659 CTTCCCTGATCTGCGAATCCT 59.584 52.381 0.78 0.00 0.00 3.24
773 793 0.608640 TGGGTTTTGTGGCACGTTTT 59.391 45.000 13.77 0.00 0.00 2.43
1155 1184 2.711922 GCCCATGTCCTCGACGTCT 61.712 63.158 14.70 0.00 34.95 4.18
1158 1187 3.758088 CTCGCCCATGTCCTCGACG 62.758 68.421 0.00 0.00 34.95 5.12
1260 1289 0.398664 AGTCCCCCAACCCTAGATCG 60.399 60.000 0.00 0.00 0.00 3.69
1492 1560 0.233332 GCATAATTCTCTGCGGCGAC 59.767 55.000 12.98 2.02 0.00 5.19
1500 1568 3.640029 CCATTGCCTTGGCATAATTCTCT 59.360 43.478 15.58 0.00 0.00 3.10
1569 1640 3.957497 CCCTAGAGCGCCTATCAGAATAT 59.043 47.826 2.29 0.00 0.00 1.28
1636 1707 0.954452 GCCGCCAATTCTCCAATAGG 59.046 55.000 0.00 0.00 0.00 2.57
1637 1708 1.334869 GTGCCGCCAATTCTCCAATAG 59.665 52.381 0.00 0.00 0.00 1.73
1638 1709 1.388547 GTGCCGCCAATTCTCCAATA 58.611 50.000 0.00 0.00 0.00 1.90
1639 1710 1.322538 GGTGCCGCCAATTCTCCAAT 61.323 55.000 0.00 0.00 37.17 3.16
1640 1711 1.976474 GGTGCCGCCAATTCTCCAA 60.976 57.895 0.00 0.00 37.17 3.53
1641 1712 2.361104 GGTGCCGCCAATTCTCCA 60.361 61.111 0.00 0.00 37.17 3.86
1642 1713 3.140814 GGGTGCCGCCAATTCTCC 61.141 66.667 0.00 0.00 39.65 3.71
1643 1714 3.508840 CGGGTGCCGCCAATTCTC 61.509 66.667 0.00 0.00 41.17 2.87
1659 1730 3.420482 AAATCAGGGGGAGGCCCG 61.420 66.667 0.00 0.00 46.66 6.13
1761 1832 5.560722 TTCTACTGGTTTCCATGTCTTGA 57.439 39.130 0.00 0.00 30.82 3.02
1824 1895 1.197721 GCTGGAACTTCGACACAATGG 59.802 52.381 0.00 0.00 0.00 3.16
1971 2042 4.942483 GCATCAGCATTTATATCCTCTGCT 59.058 41.667 0.00 0.00 43.60 4.24
2440 2511 1.981256 AGGCGTTTCACCTTTGATGT 58.019 45.000 0.00 0.00 31.87 3.06
2461 2532 2.884827 ACGTTTCCTAGTATTCCGTGC 58.115 47.619 0.00 0.00 0.00 5.34
2628 2702 0.602638 TTACAGCAGCAACACCTCGG 60.603 55.000 0.00 0.00 0.00 4.63
2760 2834 8.177119 TGTAGCAAACATTAGAGGACAAAAAT 57.823 30.769 0.00 0.00 31.43 1.82
2823 2897 4.275689 CAGGGTAAATCGCATAAAGCATGA 59.724 41.667 0.00 0.00 46.13 3.07
2876 2950 7.555554 CAGAAACTTAGGATCATGTTCCTGAAT 59.444 37.037 28.46 13.01 45.85 2.57
2899 2973 6.817765 GATGTTTAACATCCTTGTTCCAGA 57.182 37.500 23.24 0.00 46.99 3.86
3040 3114 6.100004 AGTAATAACACAGATGTCACGAAGG 58.900 40.000 0.00 0.00 38.45 3.46
3122 3196 7.334421 GTCTTCAAGAAGGTATCATAACTGCAA 59.666 37.037 9.73 0.00 38.88 4.08
3149 3223 3.829886 TTTCAAAAGCGTATCCAGCAG 57.170 42.857 0.00 0.00 37.01 4.24
3178 3252 9.764363 AAACTGGTGAAAGGAAAGAATAAAATC 57.236 29.630 0.00 0.00 0.00 2.17
3196 3270 4.641094 AGTACGGAGATCTAGAAACTGGTG 59.359 45.833 0.00 0.00 0.00 4.17
3374 3451 5.762218 ACCTCAGAACAAAGAGTTTCATGAG 59.238 40.000 0.00 0.00 41.51 2.90
3380 3457 4.399303 CCACAACCTCAGAACAAAGAGTTT 59.601 41.667 0.00 0.00 41.51 2.66
3438 3515 3.389656 TGTCACCTTCAACCATGACTGTA 59.610 43.478 0.00 0.00 41.65 2.74
3439 3516 2.172505 TGTCACCTTCAACCATGACTGT 59.827 45.455 0.00 0.00 41.65 3.55
3446 3523 2.100584 GCAACAATGTCACCTTCAACCA 59.899 45.455 0.00 0.00 0.00 3.67
3468 3545 5.862845 TGATCTTTATTCTGGAGAGATGCC 58.137 41.667 0.00 0.00 0.00 4.40
3470 3547 9.727859 AATCATGATCTTTATTCTGGAGAGATG 57.272 33.333 9.06 0.00 0.00 2.90
3639 3716 2.755650 GGTGGTAGTAATGCATCTCCG 58.244 52.381 0.00 0.00 0.00 4.63
3699 3776 3.128242 CAGCTGCTTCTGGTTTATCAAGG 59.872 47.826 0.00 0.00 0.00 3.61
3702 3779 3.423539 ACAGCTGCTTCTGGTTTATCA 57.576 42.857 15.27 0.00 38.36 2.15
3727 3804 5.765182 CCTCACAGTTGTTTCTAGGATGTTT 59.235 40.000 0.00 0.00 0.00 2.83
3736 3813 8.918202 TTATGATTTACCTCACAGTTGTTTCT 57.082 30.769 0.00 0.00 0.00 2.52
3780 3857 5.483231 TCCCACAATGATTATCTTTTTGCCA 59.517 36.000 0.00 0.00 0.00 4.92
3781 3858 5.976458 TCCCACAATGATTATCTTTTTGCC 58.024 37.500 0.00 0.00 0.00 4.52
4335 4412 0.466922 CATCCTCCCCACAATGAGCC 60.467 60.000 0.00 0.00 0.00 4.70
4681 4758 8.854033 CCAAGAGGAACAGTGATCAACACAGA 62.854 46.154 0.00 0.00 44.21 3.41
4722 4799 6.146673 GCAAGGAAGGAGAAAATTTGATTGTG 59.853 38.462 0.00 0.00 0.00 3.33
4723 4800 6.226052 GCAAGGAAGGAGAAAATTTGATTGT 58.774 36.000 0.00 0.00 0.00 2.71
4816 4893 4.722526 TTTCATCCCAAAAGACCTCAGA 57.277 40.909 0.00 0.00 0.00 3.27
4911 4988 3.112709 GGTGCGCCGACTGTCTTC 61.113 66.667 4.18 0.00 0.00 2.87
5022 5099 1.063174 GCAGCATCCGTAAAGAGCTTG 59.937 52.381 0.00 0.00 32.35 4.01
5076 5153 2.024941 ACTAAAAGGATCAAGGCCCCAG 60.025 50.000 0.00 0.00 0.00 4.45
5211 5288 1.950484 GCACCACCAACAGTATCTGGG 60.950 57.143 1.90 0.00 37.00 4.45
5343 5420 6.429385 ACATGTCTCTGACTTCATTTCTTTCC 59.571 38.462 0.00 0.00 33.15 3.13
5559 5636 9.774413 TTCAGTTTAGTTAACCCTTCTTTAGAG 57.226 33.333 0.88 0.00 37.46 2.43
5642 5719 8.135382 AGTTGAATGTAAGAGAAGCTAGGTTA 57.865 34.615 7.26 0.00 0.00 2.85
5646 5723 8.655092 CAAAGAGTTGAATGTAAGAGAAGCTAG 58.345 37.037 0.00 0.00 36.83 3.42
5677 5754 5.881923 ATCCTGCCAGAAATTAAATGCAT 57.118 34.783 0.00 0.00 0.00 3.96
5818 5895 7.976734 CGCTCTTATATTAGTTTATGGAGGGAG 59.023 40.741 0.00 0.00 33.23 4.30
5819 5896 7.453752 ACGCTCTTATATTAGTTTATGGAGGGA 59.546 37.037 0.00 0.00 34.22 4.20
5820 5897 7.612677 ACGCTCTTATATTAGTTTATGGAGGG 58.387 38.462 0.00 0.00 35.06 4.30
5821 5898 9.490379 AAACGCTCTTATATTAGTTTATGGAGG 57.510 33.333 0.00 0.00 31.14 4.30
5871 5948 9.381038 TCCCTCTGTAAACTAATATAAGAGCAT 57.619 33.333 0.00 0.00 0.00 3.79
5872 5949 8.777578 TCCCTCTGTAAACTAATATAAGAGCA 57.222 34.615 0.00 0.00 0.00 4.26
5873 5950 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
5900 5977 9.533831 ACACAGGAACAGGAATTATCTAAAAAT 57.466 29.630 0.00 0.00 0.00 1.82
5903 5980 7.390440 CACACACAGGAACAGGAATTATCTAAA 59.610 37.037 0.00 0.00 0.00 1.85
5923 6000 0.106149 ACGAGAAAGGGACCACACAC 59.894 55.000 0.00 0.00 0.00 3.82
5958 6035 1.589716 GCACACCTTGAGCATCCCAC 61.590 60.000 0.00 0.00 34.08 4.61
6107 6189 2.364970 GAGGCATGTGATCAGCTCTAGT 59.635 50.000 0.00 0.00 0.00 2.57
6108 6190 2.364647 TGAGGCATGTGATCAGCTCTAG 59.635 50.000 0.00 0.00 0.00 2.43
6325 6407 5.190528 TCCTGAATGTAGATCCTTGCTCTTT 59.809 40.000 0.00 0.00 0.00 2.52
6327 6409 4.293494 TCCTGAATGTAGATCCTTGCTCT 58.707 43.478 0.00 0.00 0.00 4.09
6355 6437 4.378356 GCTTCATTTGTCACATGCGAAGTA 60.378 41.667 10.60 0.00 32.81 2.24
6368 6450 2.554032 GCTGTACACCTGCTTCATTTGT 59.446 45.455 0.00 0.00 35.32 2.83
6384 6466 2.159240 CCAGCAGATCTTACACGCTGTA 60.159 50.000 23.11 0.00 46.77 2.74
6462 6544 6.148480 GCCATCAGACTTTGTAGCCATTATAG 59.852 42.308 0.00 0.00 0.00 1.31
6523 6605 2.514803 CCTTGATCCGTTTTGGGTTCT 58.485 47.619 0.00 0.00 38.76 3.01
6532 6614 2.799126 TAACCATGCCTTGATCCGTT 57.201 45.000 0.00 0.00 0.00 4.44
6533 6615 2.092429 ACATAACCATGCCTTGATCCGT 60.092 45.455 0.00 0.00 35.39 4.69
6535 6617 3.567164 CAGACATAACCATGCCTTGATCC 59.433 47.826 0.00 0.00 35.39 3.36
6608 6690 1.630244 CGAACCTGTGCAGCTGCTAC 61.630 60.000 36.61 30.04 42.66 3.58
6720 6802 9.474920 CTGCTGACAACCTCAAATTTTTATAAA 57.525 29.630 0.00 0.00 0.00 1.40
6731 6813 2.418368 ACAACTGCTGACAACCTCAA 57.582 45.000 0.00 0.00 0.00 3.02
6738 6820 9.313118 CAAACTATATATGTACAACTGCTGACA 57.687 33.333 0.00 0.00 0.00 3.58
6739 6821 9.529325 TCAAACTATATATGTACAACTGCTGAC 57.471 33.333 0.00 0.00 0.00 3.51
6756 6838 9.155975 GCACTCTGAATTCTCTTTCAAACTATA 57.844 33.333 7.05 0.00 35.31 1.31
6757 6839 7.120432 GGCACTCTGAATTCTCTTTCAAACTAT 59.880 37.037 7.05 0.00 35.31 2.12
6768 6850 4.745837 GCATATGGCACTCTGAATTCTC 57.254 45.455 7.05 0.00 43.97 2.87
6794 6876 4.080299 GGACCCACCATCAGAAAGTAGAAT 60.080 45.833 0.00 0.00 38.79 2.40
6814 6896 7.979537 ACAGAAAAAGGTTTGTTTATTCTGGAC 59.020 33.333 14.77 0.00 43.94 4.02
6890 6972 8.753133 AGCCAATAAGATATCAGACGATATTCA 58.247 33.333 5.32 0.00 43.51 2.57
6896 6978 6.161855 ACAAGCCAATAAGATATCAGACGA 57.838 37.500 5.32 0.00 0.00 4.20
6901 6983 6.663093 ACAACCAACAAGCCAATAAGATATCA 59.337 34.615 5.32 0.00 0.00 2.15
6902 6984 7.100458 ACAACCAACAAGCCAATAAGATATC 57.900 36.000 0.00 0.00 0.00 1.63
6926 7008 4.776349 AGTCTGAACAACATGTACACCAA 58.224 39.130 0.00 0.00 0.00 3.67
6929 7011 6.781138 TGAAAAGTCTGAACAACATGTACAC 58.219 36.000 0.00 0.00 0.00 2.90
6937 7019 6.020360 GCACAGAAATGAAAAGTCTGAACAAC 60.020 38.462 6.89 0.00 41.08 3.32
6940 7022 5.581605 TGCACAGAAATGAAAAGTCTGAAC 58.418 37.500 6.89 0.00 41.08 3.18
6943 7025 4.543692 CCTGCACAGAAATGAAAAGTCTG 58.456 43.478 0.00 0.00 43.61 3.51
7051 7133 5.817296 TCTTGTATCAGATTCGTCCAAATGG 59.183 40.000 0.00 0.00 0.00 3.16
7120 7202 3.203710 TGCCATTCCTGGAATCAATCTCT 59.796 43.478 18.87 0.00 46.37 3.10
7294 7376 2.093128 CCATGCCCTAGTAAACCGACTT 60.093 50.000 0.00 0.00 0.00 3.01
7300 7382 3.359695 TCAACCCATGCCCTAGTAAAC 57.640 47.619 0.00 0.00 0.00 2.01
7422 7504 5.398353 CCTGAATCTTCTTCCATGGGTATGT 60.398 44.000 13.02 0.00 32.21 2.29
7440 7522 2.450476 CCTGCTTTTGGCTACCTGAAT 58.550 47.619 0.00 0.00 42.39 2.57
7460 7542 1.706443 GAGGCAGAACTTTTGCATGC 58.294 50.000 11.82 11.82 43.28 4.06
7549 7631 8.007405 TCAGTAGTGTGCTAATGAAAGCTATA 57.993 34.615 2.84 0.00 45.59 1.31
7650 7732 4.652421 ACTAGTTCAGAAAGGGTGTGTACA 59.348 41.667 0.00 0.00 0.00 2.90
7651 7733 5.211174 ACTAGTTCAGAAAGGGTGTGTAC 57.789 43.478 0.00 0.00 0.00 2.90
7672 7754 7.237887 AGGACTTATATTTAGGAATGGAGGGAC 59.762 40.741 0.00 0.00 0.00 4.46
7673 7755 7.321530 AGGACTTATATTTAGGAATGGAGGGA 58.678 38.462 0.00 0.00 0.00 4.20
7674 7756 7.575499 AGGACTTATATTTAGGAATGGAGGG 57.425 40.000 0.00 0.00 0.00 4.30
7675 7757 9.868160 AAAAGGACTTATATTTAGGAATGGAGG 57.132 33.333 0.00 0.00 0.00 4.30
7694 7776 9.886132 TGTTTATAGTGGAATCTCTAAAAGGAC 57.114 33.333 0.00 0.00 0.00 3.85
7695 7777 9.886132 GTGTTTATAGTGGAATCTCTAAAAGGA 57.114 33.333 0.00 0.00 0.00 3.36
7696 7778 9.892130 AGTGTTTATAGTGGAATCTCTAAAAGG 57.108 33.333 0.00 0.00 0.00 3.11
7703 7785 8.969267 CGAATGTAGTGTTTATAGTGGAATCTC 58.031 37.037 0.00 0.00 0.00 2.75
7704 7786 7.926555 CCGAATGTAGTGTTTATAGTGGAATCT 59.073 37.037 0.00 0.00 0.00 2.40
7705 7787 7.924412 TCCGAATGTAGTGTTTATAGTGGAATC 59.076 37.037 0.00 0.00 0.00 2.52
7706 7788 7.788026 TCCGAATGTAGTGTTTATAGTGGAAT 58.212 34.615 0.00 0.00 0.00 3.01
7707 7789 7.172868 TCCGAATGTAGTGTTTATAGTGGAA 57.827 36.000 0.00 0.00 0.00 3.53
7708 7790 6.778834 TCCGAATGTAGTGTTTATAGTGGA 57.221 37.500 0.00 0.00 0.00 4.02
7709 7791 6.984474 ACATCCGAATGTAGTGTTTATAGTGG 59.016 38.462 0.00 0.00 44.38 4.00
7726 7808 9.803507 TCTAAAAGGAGTCTATATACATCCGAA 57.196 33.333 0.00 0.00 35.13 4.30
7727 7809 9.451002 CTCTAAAAGGAGTCTATATACATCCGA 57.549 37.037 0.00 0.00 35.13 4.55
7728 7810 9.233649 ACTCTAAAAGGAGTCTATATACATCCG 57.766 37.037 0.00 0.00 42.15 4.18
7735 7817 9.900112 AACCCATACTCTAAAAGGAGTCTATAT 57.100 33.333 0.20 0.00 44.34 0.86
7736 7818 9.364653 GAACCCATACTCTAAAAGGAGTCTATA 57.635 37.037 0.20 0.00 44.34 1.31
7737 7819 7.844779 TGAACCCATACTCTAAAAGGAGTCTAT 59.155 37.037 0.20 0.00 44.34 1.98
7738 7820 7.123847 GTGAACCCATACTCTAAAAGGAGTCTA 59.876 40.741 0.20 0.00 44.34 2.59
7739 7821 6.023603 TGAACCCATACTCTAAAAGGAGTCT 58.976 40.000 0.20 0.00 44.34 3.24
7740 7822 6.107343 GTGAACCCATACTCTAAAAGGAGTC 58.893 44.000 0.20 0.00 44.34 3.36
7741 7823 5.045797 GGTGAACCCATACTCTAAAAGGAGT 60.046 44.000 2.73 2.73 46.68 3.85
7742 7824 5.429130 GGTGAACCCATACTCTAAAAGGAG 58.571 45.833 0.00 0.00 39.09 3.69
7743 7825 5.431179 GGTGAACCCATACTCTAAAAGGA 57.569 43.478 0.00 0.00 0.00 3.36
7758 7840 0.243636 CGGAGCAAAATGGGTGAACC 59.756 55.000 0.00 0.00 40.81 3.62
7759 7841 0.243636 CCGGAGCAAAATGGGTGAAC 59.756 55.000 0.00 0.00 0.00 3.18
7760 7842 0.111446 TCCGGAGCAAAATGGGTGAA 59.889 50.000 0.00 0.00 0.00 3.18
7761 7843 0.331278 ATCCGGAGCAAAATGGGTGA 59.669 50.000 11.34 0.00 0.00 4.02
7762 7844 0.457035 CATCCGGAGCAAAATGGGTG 59.543 55.000 11.34 0.00 0.00 4.61
7763 7845 0.039618 ACATCCGGAGCAAAATGGGT 59.960 50.000 11.34 0.00 0.00 4.51
7764 7846 1.949525 CTACATCCGGAGCAAAATGGG 59.050 52.381 11.34 0.00 0.00 4.00
7765 7847 2.614057 GACTACATCCGGAGCAAAATGG 59.386 50.000 11.34 0.00 0.00 3.16
7766 7848 3.535561 AGACTACATCCGGAGCAAAATG 58.464 45.455 11.34 4.36 0.00 2.32
7767 7849 3.914426 AGACTACATCCGGAGCAAAAT 57.086 42.857 11.34 0.00 0.00 1.82
7768 7850 5.597182 ACTATAGACTACATCCGGAGCAAAA 59.403 40.000 11.34 0.00 0.00 2.44
7769 7851 5.009710 CACTATAGACTACATCCGGAGCAAA 59.990 44.000 11.34 0.00 0.00 3.68
7770 7852 4.519350 CACTATAGACTACATCCGGAGCAA 59.481 45.833 11.34 0.00 0.00 3.91
7771 7853 4.072839 CACTATAGACTACATCCGGAGCA 58.927 47.826 11.34 0.00 0.00 4.26
7772 7854 3.440872 CCACTATAGACTACATCCGGAGC 59.559 52.174 11.34 0.00 0.00 4.70
7773 7855 4.907809 TCCACTATAGACTACATCCGGAG 58.092 47.826 11.34 4.72 0.00 4.63
7774 7856 4.987963 TCCACTATAGACTACATCCGGA 57.012 45.455 6.61 6.61 0.00 5.14
7775 7857 5.946972 AGATTCCACTATAGACTACATCCGG 59.053 44.000 6.78 0.00 0.00 5.14
7776 7858 6.882140 AGAGATTCCACTATAGACTACATCCG 59.118 42.308 6.78 0.00 0.00 4.18
7777 7859 9.742144 TTAGAGATTCCACTATAGACTACATCC 57.258 37.037 6.78 0.00 0.00 3.51
7783 7865 9.138596 GTCCTTTTAGAGATTCCACTATAGACT 57.861 37.037 6.78 0.00 0.00 3.24
7784 7866 9.138596 AGTCCTTTTAGAGATTCCACTATAGAC 57.861 37.037 6.78 0.00 0.00 2.59
7785 7867 9.716556 AAGTCCTTTTAGAGATTCCACTATAGA 57.283 33.333 6.78 0.00 0.00 1.98
7802 7884 9.907229 CCTCTGTTCCTAAATATAAGTCCTTTT 57.093 33.333 0.00 0.00 0.00 2.27
7803 7885 8.495260 CCCTCTGTTCCTAAATATAAGTCCTTT 58.505 37.037 0.00 0.00 0.00 3.11
7804 7886 7.849904 TCCCTCTGTTCCTAAATATAAGTCCTT 59.150 37.037 0.00 0.00 0.00 3.36
7805 7887 7.371043 TCCCTCTGTTCCTAAATATAAGTCCT 58.629 38.462 0.00 0.00 0.00 3.85
7806 7888 7.290481 ACTCCCTCTGTTCCTAAATATAAGTCC 59.710 40.741 0.00 0.00 0.00 3.85
7807 7889 8.252624 ACTCCCTCTGTTCCTAAATATAAGTC 57.747 38.462 0.00 0.00 0.00 3.01
7808 7890 9.369672 CTACTCCCTCTGTTCCTAAATATAAGT 57.630 37.037 0.00 0.00 0.00 2.24
7809 7891 9.369672 ACTACTCCCTCTGTTCCTAAATATAAG 57.630 37.037 0.00 0.00 0.00 1.73
7812 7894 9.315363 CATACTACTCCCTCTGTTCCTAAATAT 57.685 37.037 0.00 0.00 0.00 1.28
7813 7895 7.728981 CCATACTACTCCCTCTGTTCCTAAATA 59.271 40.741 0.00 0.00 0.00 1.40
7814 7896 6.555360 CCATACTACTCCCTCTGTTCCTAAAT 59.445 42.308 0.00 0.00 0.00 1.40
7815 7897 5.897824 CCATACTACTCCCTCTGTTCCTAAA 59.102 44.000 0.00 0.00 0.00 1.85
7816 7898 5.043582 ACCATACTACTCCCTCTGTTCCTAA 60.044 44.000 0.00 0.00 0.00 2.69
7817 7899 4.481280 ACCATACTACTCCCTCTGTTCCTA 59.519 45.833 0.00 0.00 0.00 2.94
7818 7900 3.272551 ACCATACTACTCCCTCTGTTCCT 59.727 47.826 0.00 0.00 0.00 3.36
7819 7901 3.644335 ACCATACTACTCCCTCTGTTCC 58.356 50.000 0.00 0.00 0.00 3.62
7820 7902 6.980416 AATACCATACTACTCCCTCTGTTC 57.020 41.667 0.00 0.00 0.00 3.18
7821 7903 6.901300 TCAAATACCATACTACTCCCTCTGTT 59.099 38.462 0.00 0.00 0.00 3.16
7822 7904 6.441222 TCAAATACCATACTACTCCCTCTGT 58.559 40.000 0.00 0.00 0.00 3.41
7823 7905 6.978674 TCAAATACCATACTACTCCCTCTG 57.021 41.667 0.00 0.00 0.00 3.35
7824 7906 7.989947 TTTCAAATACCATACTACTCCCTCT 57.010 36.000 0.00 0.00 0.00 3.69
7873 7955 8.673456 ACACCCCTAACATTATAACCAAAAAT 57.327 30.769 0.00 0.00 0.00 1.82
7890 7975 5.335261 TGTATCTACAGTTCAACACCCCTA 58.665 41.667 0.00 0.00 0.00 3.53
7935 8028 6.957631 ACACAGATGGAGATGGTATTACAAA 58.042 36.000 0.00 0.00 0.00 2.83
7944 8037 2.093075 AGAGCAACACAGATGGAGATGG 60.093 50.000 0.00 0.00 0.00 3.51
7945 8038 3.263489 AGAGCAACACAGATGGAGATG 57.737 47.619 0.00 0.00 0.00 2.90
7946 8039 5.627182 AATAGAGCAACACAGATGGAGAT 57.373 39.130 0.00 0.00 0.00 2.75
7947 8040 5.426689 AAATAGAGCAACACAGATGGAGA 57.573 39.130 0.00 0.00 0.00 3.71
7948 8041 5.413833 ACAAAATAGAGCAACACAGATGGAG 59.586 40.000 0.00 0.00 0.00 3.86
7949 8042 5.316167 ACAAAATAGAGCAACACAGATGGA 58.684 37.500 0.00 0.00 0.00 3.41
7976 8069 8.806146 AGCAGAAAAAGGCTAATGAAAATAAGA 58.194 29.630 0.00 0.00 38.90 2.10
7984 8077 5.301551 TGAACAAGCAGAAAAAGGCTAATGA 59.698 36.000 0.00 0.00 40.01 2.57
8048 8141 6.022163 ACATATACCGGTCAGTGCTATTAC 57.978 41.667 12.40 0.00 0.00 1.89
8049 8142 6.659745 AACATATACCGGTCAGTGCTATTA 57.340 37.500 12.40 0.00 0.00 0.98
8050 8143 5.546621 AACATATACCGGTCAGTGCTATT 57.453 39.130 12.40 0.00 0.00 1.73
8055 8148 5.063438 CAGAACAAACATATACCGGTCAGTG 59.937 44.000 12.40 11.11 0.00 3.66
8062 8155 5.416083 TGAGACCAGAACAAACATATACCG 58.584 41.667 0.00 0.00 0.00 4.02
8064 8157 7.602644 TCTGTTGAGACCAGAACAAACATATAC 59.397 37.037 0.00 0.00 36.07 1.47
8066 8159 6.533730 TCTGTTGAGACCAGAACAAACATAT 58.466 36.000 0.00 0.00 36.07 1.78
8071 8164 5.034852 TGATCTGTTGAGACCAGAACAAA 57.965 39.130 0.00 0.00 41.93 2.83
8075 8168 5.488262 TCAATGATCTGTTGAGACCAGAA 57.512 39.130 9.21 0.00 41.93 3.02
8092 8185 1.535226 CCTTCGGTGCATGCATCAATG 60.535 52.381 29.40 14.36 0.00 2.82
8110 8203 1.481772 GCAGTCATCAGCTTCTCTCCT 59.518 52.381 0.00 0.00 0.00 3.69
8215 8308 7.042797 TGATTGATAGAAAGCCCTAAAATGC 57.957 36.000 0.00 0.00 0.00 3.56
8334 8427 8.033038 CCAAGGGTTAAAACTTATAAAGAAGCC 58.967 37.037 0.00 0.00 32.42 4.35
8367 8460 9.491675 ACAAATGTTTGAATCTGCATTATTTGA 57.508 25.926 12.09 0.00 40.55 2.69
8401 8494 1.817099 GCCAATGCCTCTCGACCAG 60.817 63.158 0.00 0.00 0.00 4.00
8511 8604 1.378250 GAGCCAATGCCTGCTGAGT 60.378 57.895 0.00 0.00 38.11 3.41
8516 8609 2.792947 CCATGGAGCCAATGCCTGC 61.793 63.158 5.56 0.00 38.69 4.85
8555 8648 5.892524 TGATGATGGAGGTGATATCAACA 57.107 39.130 22.52 12.25 35.62 3.33
8559 8652 6.885922 TGATGATGATGATGGAGGTGATATC 58.114 40.000 0.00 0.00 0.00 1.63
8560 8653 6.886178 TGATGATGATGATGGAGGTGATAT 57.114 37.500 0.00 0.00 0.00 1.63
8561 8654 6.442564 TGATGATGATGATGATGGAGGTGATA 59.557 38.462 0.00 0.00 0.00 2.15
8562 8655 5.250774 TGATGATGATGATGATGGAGGTGAT 59.749 40.000 0.00 0.00 0.00 3.06
8563 8656 4.595781 TGATGATGATGATGATGGAGGTGA 59.404 41.667 0.00 0.00 0.00 4.02
8564 8657 4.906618 TGATGATGATGATGATGGAGGTG 58.093 43.478 0.00 0.00 0.00 4.00
8565 8658 5.627040 CGATGATGATGATGATGATGGAGGT 60.627 44.000 0.00 0.00 0.00 3.85
8569 8662 5.642063 TGAACGATGATGATGATGATGATGG 59.358 40.000 0.00 0.00 0.00 3.51
8570 8663 6.721571 TGAACGATGATGATGATGATGATG 57.278 37.500 0.00 0.00 0.00 3.07
8571 8664 8.475639 TCTATGAACGATGATGATGATGATGAT 58.524 33.333 0.00 0.00 0.00 2.45
8572 8665 7.833786 TCTATGAACGATGATGATGATGATGA 58.166 34.615 0.00 0.00 0.00 2.92
8573 8666 8.649973 ATCTATGAACGATGATGATGATGATG 57.350 34.615 0.00 0.00 0.00 3.07
8574 8667 9.099454 CAATCTATGAACGATGATGATGATGAT 57.901 33.333 0.00 0.00 0.00 2.45
8575 8668 7.548075 CCAATCTATGAACGATGATGATGATGA 59.452 37.037 0.00 0.00 0.00 2.92
8576 8669 7.676572 GCCAATCTATGAACGATGATGATGATG 60.677 40.741 0.00 0.00 0.00 3.07
8578 8671 5.640783 GCCAATCTATGAACGATGATGATGA 59.359 40.000 0.00 0.00 0.00 2.92
8579 8672 5.410439 TGCCAATCTATGAACGATGATGATG 59.590 40.000 0.00 0.00 0.00 3.07
8580 8673 5.410746 GTGCCAATCTATGAACGATGATGAT 59.589 40.000 0.00 0.00 0.00 2.45
8581 8674 4.751600 GTGCCAATCTATGAACGATGATGA 59.248 41.667 0.00 0.00 0.00 2.92
8582 8675 4.512571 TGTGCCAATCTATGAACGATGATG 59.487 41.667 0.00 0.00 0.00 3.07
8584 8677 4.135747 TGTGCCAATCTATGAACGATGA 57.864 40.909 0.00 0.00 0.00 2.92
8586 8679 5.125356 TGAATGTGCCAATCTATGAACGAT 58.875 37.500 0.00 0.00 0.00 3.73
8587 8680 4.512484 TGAATGTGCCAATCTATGAACGA 58.488 39.130 0.00 0.00 0.00 3.85
8588 8681 4.880886 TGAATGTGCCAATCTATGAACG 57.119 40.909 0.00 0.00 0.00 3.95
8590 8683 5.698104 AGGATGAATGTGCCAATCTATGAA 58.302 37.500 0.00 0.00 0.00 2.57
8591 8684 5.314718 AGGATGAATGTGCCAATCTATGA 57.685 39.130 0.00 0.00 0.00 2.15
8593 8686 5.452255 ACAAGGATGAATGTGCCAATCTAT 58.548 37.500 0.00 0.00 0.00 1.98
8594 8687 4.858850 ACAAGGATGAATGTGCCAATCTA 58.141 39.130 0.00 0.00 0.00 1.98
8595 8688 3.705051 ACAAGGATGAATGTGCCAATCT 58.295 40.909 0.00 0.00 0.00 2.40
8596 8689 5.779529 ATACAAGGATGAATGTGCCAATC 57.220 39.130 0.00 0.00 0.00 2.67
8597 8690 5.657745 TCAATACAAGGATGAATGTGCCAAT 59.342 36.000 0.00 0.00 0.00 3.16
8734 8830 0.981183 TTCGGTACAAGCCATGGAGT 59.019 50.000 18.40 12.91 0.00 3.85
8738 8834 1.086696 CCACTTCGGTACAAGCCATG 58.913 55.000 0.00 0.00 0.00 3.66
8943 9039 4.910304 AGGTGATTGCTAGGAACAGGATAT 59.090 41.667 0.00 0.00 0.00 1.63
8998 9095 0.609131 CCAACCATCTCCGCCAAACT 60.609 55.000 0.00 0.00 0.00 2.66
9031 9128 0.570727 TGGGGGATATACAGAGGGCA 59.429 55.000 0.00 0.00 0.00 5.36
9080 9182 1.616159 GGCACCTTCTGGCACTTTAA 58.384 50.000 0.00 0.00 45.09 1.52
9081 9183 3.339547 GGCACCTTCTGGCACTTTA 57.660 52.632 0.00 0.00 45.09 1.85
9082 9184 4.181051 GGCACCTTCTGGCACTTT 57.819 55.556 0.00 0.00 45.09 2.66
9157 9259 2.229784 GCAAGAACCAGATGGGAAACAG 59.770 50.000 3.48 0.00 41.15 3.16
9245 9347 1.128513 GGAAAAAGCGCAACGGAAAG 58.871 50.000 11.47 0.00 0.00 2.62
9251 9353 1.336755 TCCTCTTGGAAAAAGCGCAAC 59.663 47.619 11.47 0.00 39.87 4.17
9265 9367 4.339530 GGCAGAAAGAAACAAACTCCTCTT 59.660 41.667 0.00 0.00 0.00 2.85
9266 9368 3.885901 GGCAGAAAGAAACAAACTCCTCT 59.114 43.478 0.00 0.00 0.00 3.69
9272 9374 7.158099 ACATATAGGGCAGAAAGAAACAAAC 57.842 36.000 0.00 0.00 0.00 2.93
9292 9394 2.094575 GGAAACACAACGCGCATACATA 59.905 45.455 5.73 0.00 0.00 2.29
9293 9395 1.135803 GGAAACACAACGCGCATACAT 60.136 47.619 5.73 0.00 0.00 2.29
9300 9402 2.051345 GCTGGGAAACACAACGCG 60.051 61.111 3.53 3.53 0.00 6.01
9301 9403 1.008538 CAGCTGGGAAACACAACGC 60.009 57.895 5.57 0.00 0.00 4.84
9302 9404 0.817634 TCCAGCTGGGAAACACAACG 60.818 55.000 32.23 2.19 44.80 4.10
9321 9423 3.548014 CGCGGAAACACAGAAAACAAGAT 60.548 43.478 0.00 0.00 0.00 2.40
9328 9430 1.262950 CATGACGCGGAAACACAGAAA 59.737 47.619 12.47 0.00 0.00 2.52
9329 9431 0.865111 CATGACGCGGAAACACAGAA 59.135 50.000 12.47 0.00 0.00 3.02
9330 9432 0.948623 CCATGACGCGGAAACACAGA 60.949 55.000 12.47 0.00 0.00 3.41
9340 9448 2.202797 CCACTCTCCCATGACGCG 60.203 66.667 3.53 3.53 0.00 6.01
9341 9449 0.179000 ATTCCACTCTCCCATGACGC 59.821 55.000 0.00 0.00 0.00 5.19
9344 9452 3.117745 ACATGATTCCACTCTCCCATGA 58.882 45.455 0.00 0.00 36.29 3.07
9349 9457 4.761739 TGTTCAAACATGATTCCACTCTCC 59.238 41.667 0.00 0.00 33.17 3.71
9367 9475 4.959210 TCTGGGAAAGAAAAACCATGTTCA 59.041 37.500 0.00 0.00 31.62 3.18
9371 9479 4.797275 GCACTCTGGGAAAGAAAAACCATG 60.797 45.833 0.00 0.00 33.37 3.66
9378 9486 1.133823 TGCTGCACTCTGGGAAAGAAA 60.134 47.619 0.00 0.00 33.37 2.52
9380 9488 0.035881 CTGCTGCACTCTGGGAAAGA 59.964 55.000 0.00 0.00 0.00 2.52
9381 9489 1.584380 GCTGCTGCACTCTGGGAAAG 61.584 60.000 11.11 0.00 39.41 2.62
9384 9492 3.243816 TGCTGCTGCACTCTGGGA 61.244 61.111 14.93 0.00 45.31 4.37
9387 9495 2.041115 ATGCTGCTGCTGCACTCTG 61.041 57.895 31.73 6.18 45.31 3.35
9388 9496 2.041115 CATGCTGCTGCTGCACTCT 61.041 57.895 31.73 16.75 45.31 3.24
9389 9497 1.863662 AACATGCTGCTGCTGCACTC 61.864 55.000 31.73 9.81 45.31 3.51
9390 9498 1.461091 AAACATGCTGCTGCTGCACT 61.461 50.000 31.73 19.08 45.31 4.40
9391 9499 1.006571 AAACATGCTGCTGCTGCAC 60.007 52.632 31.73 11.90 45.31 4.57
9393 9501 0.038526 AAGAAACATGCTGCTGCTGC 60.039 50.000 22.51 22.51 40.48 5.25
9394 9502 2.486982 AGTAAGAAACATGCTGCTGCTG 59.513 45.455 17.00 13.80 40.48 4.41
9395 9503 2.787994 AGTAAGAAACATGCTGCTGCT 58.212 42.857 17.00 0.00 40.48 4.24
9396 9504 3.565905 AAGTAAGAAACATGCTGCTGC 57.434 42.857 8.89 8.89 40.20 5.25
9397 9505 4.678287 CACAAAGTAAGAAACATGCTGCTG 59.322 41.667 0.00 0.00 0.00 4.41
9398 9506 4.580167 TCACAAAGTAAGAAACATGCTGCT 59.420 37.500 0.00 0.00 0.00 4.24
9399 9507 4.858935 TCACAAAGTAAGAAACATGCTGC 58.141 39.130 0.00 0.00 0.00 5.25
9400 9508 9.069078 CAATATCACAAAGTAAGAAACATGCTG 57.931 33.333 0.00 0.00 0.00 4.41
9401 9509 8.796475 ACAATATCACAAAGTAAGAAACATGCT 58.204 29.630 0.00 0.00 0.00 3.79
9402 9510 8.970691 ACAATATCACAAAGTAAGAAACATGC 57.029 30.769 0.00 0.00 0.00 4.06
9416 9524 9.958180 TCAGGAGAAAATAAGACAATATCACAA 57.042 29.630 0.00 0.00 0.00 3.33
9417 9525 9.605275 CTCAGGAGAAAATAAGACAATATCACA 57.395 33.333 0.00 0.00 0.00 3.58
9418 9526 9.050601 CCTCAGGAGAAAATAAGACAATATCAC 57.949 37.037 0.00 0.00 0.00 3.06
9419 9527 8.992349 TCCTCAGGAGAAAATAAGACAATATCA 58.008 33.333 0.00 0.00 0.00 2.15


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.