Multiple sequence alignment - TraesCS6B01G448400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G448400 chr6B 100.000 4783 0 0 1 4783 708183217 708178435 0.000000e+00 8833.0
1 TraesCS6B01G448400 chr6B 87.019 2365 258 28 1006 3361 708099152 708096828 0.000000e+00 2621.0
2 TraesCS6B01G448400 chr6B 84.963 2587 305 55 1035 3599 708105582 708103058 0.000000e+00 2545.0
3 TraesCS6B01G448400 chr6B 80.958 2631 416 59 1010 3602 708126806 708124223 0.000000e+00 2004.0
4 TraesCS6B01G448400 chr6B 88.048 1573 182 6 1010 2581 708073898 708072331 0.000000e+00 1858.0
5 TraesCS6B01G448400 chr6B 84.497 1619 234 16 1023 2634 708067323 708065715 0.000000e+00 1583.0
6 TraesCS6B01G448400 chr6B 86.544 981 104 13 2624 3603 708072186 708071233 0.000000e+00 1055.0
7 TraesCS6B01G448400 chr6B 82.082 932 121 19 2681 3609 708055680 708054792 0.000000e+00 754.0
8 TraesCS6B01G448400 chr6B 90.585 393 30 5 456 847 708074643 708074257 9.180000e-142 514.0
9 TraesCS6B01G448400 chr6B 90.909 154 8 3 73 225 708074956 708074808 8.120000e-48 202.0
10 TraesCS6B01G448400 chr6B 78.182 220 24 10 354 550 708106310 708106092 8.410000e-23 119.0
11 TraesCS6B01G448400 chr6A 90.656 3264 247 25 245 3498 610934713 610931498 0.000000e+00 4285.0
12 TraesCS6B01G448400 chr6A 81.762 2610 415 45 1023 3601 610946031 610943452 0.000000e+00 2126.0
13 TraesCS6B01G448400 chr6D 88.645 2457 232 29 1137 3585 464348431 464346014 0.000000e+00 2948.0
14 TraesCS6B01G448400 chr6D 80.714 2577 428 55 1010 3557 464433101 464430565 0.000000e+00 1941.0
15 TraesCS6B01G448400 chr6D 84.409 1642 238 15 992 2626 464405628 464403998 0.000000e+00 1598.0
16 TraesCS6B01G448400 chr6D 81.511 1244 150 40 2382 3599 464398260 464397071 0.000000e+00 950.0
17 TraesCS6B01G448400 chr6D 82.421 950 131 20 2664 3609 464403298 464402381 0.000000e+00 797.0
18 TraesCS6B01G448400 chr6D 82.020 406 40 12 3835 4214 464345733 464345335 9.990000e-82 315.0
19 TraesCS6B01G448400 chr6D 82.609 345 33 5 3835 4156 464402201 464401861 3.650000e-71 279.0
20 TraesCS6B01G448400 chr6D 88.525 61 2 3 4330 4390 319425062 319425117 8.590000e-08 69.4
21 TraesCS6B01G448400 chr7A 77.288 612 120 17 1110 1710 733025970 733025367 4.580000e-90 342.0
22 TraesCS6B01G448400 chr4D 90.000 60 1 1 4330 4389 33279529 33279475 6.640000e-09 73.1
23 TraesCS6B01G448400 chr4D 89.655 58 1 1 4330 4387 33279480 33279532 8.590000e-08 69.4
24 TraesCS6B01G448400 chr3A 86.364 66 7 2 4330 4394 633921421 633921357 2.390000e-08 71.3
25 TraesCS6B01G448400 chr1D 88.525 61 2 1 4330 4390 6386355 6386300 8.590000e-08 69.4
26 TraesCS6B01G448400 chr1D 89.655 58 1 1 4330 4387 6386306 6386358 8.590000e-08 69.4
27 TraesCS6B01G448400 chr1A 85.484 62 8 1 4330 4390 589633165 589633226 4.000000e-06 63.9
28 TraesCS6B01G448400 chrUn 89.796 49 2 3 4357 4403 320348038 320347991 5.170000e-05 60.2
29 TraesCS6B01G448400 chr5D 82.609 69 7 4 4330 4396 539055601 539055536 6.690000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G448400 chr6B 708178435 708183217 4782 True 8833.000000 8833 100.0000 1 4783 1 chr6B.!!$R3 4782
1 TraesCS6B01G448400 chr6B 708124223 708126806 2583 True 2004.000000 2004 80.9580 1010 3602 1 chr6B.!!$R2 2592
2 TraesCS6B01G448400 chr6B 708096828 708106310 9482 True 1761.666667 2621 83.3880 354 3599 3 chr6B.!!$R5 3245
3 TraesCS6B01G448400 chr6B 708065715 708074956 9241 True 1042.400000 1858 88.1166 73 3603 5 chr6B.!!$R4 3530
4 TraesCS6B01G448400 chr6B 708054792 708055680 888 True 754.000000 754 82.0820 2681 3609 1 chr6B.!!$R1 928
5 TraesCS6B01G448400 chr6A 610931498 610934713 3215 True 4285.000000 4285 90.6560 245 3498 1 chr6A.!!$R1 3253
6 TraesCS6B01G448400 chr6A 610943452 610946031 2579 True 2126.000000 2126 81.7620 1023 3601 1 chr6A.!!$R2 2578
7 TraesCS6B01G448400 chr6D 464430565 464433101 2536 True 1941.000000 1941 80.7140 1010 3557 1 chr6D.!!$R1 2547
8 TraesCS6B01G448400 chr6D 464345335 464348431 3096 True 1631.500000 2948 85.3325 1137 4214 2 chr6D.!!$R2 3077
9 TraesCS6B01G448400 chr6D 464397071 464405628 8557 True 906.000000 1598 82.7375 992 4156 4 chr6D.!!$R3 3164
10 TraesCS6B01G448400 chr7A 733025367 733025970 603 True 342.000000 342 77.2880 1110 1710 1 chr7A.!!$R1 600

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
32 33 0.179234 TGTTGGGCTGACTGAACGAA 59.821 50.0 0.00 0.00 0.00 3.85 F
34 35 0.250295 TTGGGCTGACTGAACGAAGG 60.250 55.0 0.00 0.00 0.00 3.46 F
298 300 0.393944 ATGCATCAGTGTGGAGCCTG 60.394 55.0 0.00 0.00 0.00 4.85 F
910 1006 0.403271 ATGTGAGCTGAACTGGCCTT 59.597 50.0 3.32 0.00 0.00 4.35 F
939 1043 0.534203 TGTTTTCGTCCCTGCAGGTC 60.534 55.0 30.63 21.07 36.75 3.85 F
1064 1356 1.148310 CGTGGGTAGTCTTGCTGTTG 58.852 55.0 0.00 0.00 0.00 3.33 F
2950 4046 0.311165 CGACACGTGAGGTTGAGAGT 59.689 55.0 25.01 0.00 0.00 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1459 1760 0.752743 GCTGGTGCATAAGGCCATCA 60.753 55.000 5.01 0.0 43.89 3.07 R
1461 1762 1.307309 TGCTGGTGCATAAGGCCAT 59.693 52.632 5.01 0.0 45.31 4.40 R
2239 2541 0.679505 AGTCCTTGTAACTGCGAGCA 59.320 50.000 0.00 0.0 0.00 4.26 R
2531 2833 0.881118 TCAAGGAAACCATCTTGCGC 59.119 50.000 0.00 0.0 39.92 6.09 R
2917 4013 1.790755 GTGTCGTAGGTGAATGCACA 58.209 50.000 6.08 0.0 46.96 4.57 R
2953 4049 3.517901 AGAAGGAACCATCGTGTATCCAA 59.482 43.478 0.00 0.0 32.47 3.53 R
4553 9221 0.029035 CCGTCTCGGTGATTACTCGG 59.971 60.000 0.00 0.0 42.73 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.667724 CAGATGACGAAGATGTTGGGC 59.332 52.381 0.00 0.00 0.00 5.36
21 22 1.556911 AGATGACGAAGATGTTGGGCT 59.443 47.619 0.00 0.00 0.00 5.19
22 23 1.667724 GATGACGAAGATGTTGGGCTG 59.332 52.381 0.00 0.00 0.00 4.85
23 24 0.684535 TGACGAAGATGTTGGGCTGA 59.315 50.000 0.00 0.00 0.00 4.26
24 25 1.079503 GACGAAGATGTTGGGCTGAC 58.920 55.000 0.00 0.00 0.00 3.51
25 26 0.687354 ACGAAGATGTTGGGCTGACT 59.313 50.000 0.00 0.00 0.00 3.41
26 27 1.081892 CGAAGATGTTGGGCTGACTG 58.918 55.000 0.00 0.00 0.00 3.51
27 28 1.338105 CGAAGATGTTGGGCTGACTGA 60.338 52.381 0.00 0.00 0.00 3.41
28 29 2.783135 GAAGATGTTGGGCTGACTGAA 58.217 47.619 0.00 0.00 0.00 3.02
29 30 2.191128 AGATGTTGGGCTGACTGAAC 57.809 50.000 0.00 0.00 0.00 3.18
30 31 0.798776 GATGTTGGGCTGACTGAACG 59.201 55.000 0.00 0.00 0.00 3.95
31 32 0.396435 ATGTTGGGCTGACTGAACGA 59.604 50.000 0.00 0.00 0.00 3.85
32 33 0.179234 TGTTGGGCTGACTGAACGAA 59.821 50.000 0.00 0.00 0.00 3.85
33 34 0.868406 GTTGGGCTGACTGAACGAAG 59.132 55.000 0.00 0.00 0.00 3.79
34 35 0.250295 TTGGGCTGACTGAACGAAGG 60.250 55.000 0.00 0.00 0.00 3.46
35 36 2.035442 GGGCTGACTGAACGAAGGC 61.035 63.158 0.00 0.00 34.65 4.35
36 37 1.301716 GGCTGACTGAACGAAGGCA 60.302 57.895 0.00 0.00 35.43 4.75
37 38 1.569479 GGCTGACTGAACGAAGGCAC 61.569 60.000 0.00 0.00 35.43 5.01
38 39 1.891060 GCTGACTGAACGAAGGCACG 61.891 60.000 0.00 2.85 39.31 5.34
39 40 1.891060 CTGACTGAACGAAGGCACGC 61.891 60.000 0.00 0.00 36.70 5.34
40 41 1.954146 GACTGAACGAAGGCACGCA 60.954 57.895 0.00 0.00 36.70 5.24
41 42 1.891060 GACTGAACGAAGGCACGCAG 61.891 60.000 0.00 6.99 36.70 5.18
42 43 1.664649 CTGAACGAAGGCACGCAGA 60.665 57.895 0.00 0.00 36.70 4.26
43 44 1.891060 CTGAACGAAGGCACGCAGAC 61.891 60.000 0.00 0.00 36.70 3.51
44 45 1.954146 GAACGAAGGCACGCAGACA 60.954 57.895 0.00 0.00 36.70 3.41
45 46 1.891060 GAACGAAGGCACGCAGACAG 61.891 60.000 0.00 0.00 36.70 3.51
46 47 3.114616 CGAAGGCACGCAGACAGG 61.115 66.667 0.00 0.00 0.00 4.00
47 48 2.031163 GAAGGCACGCAGACAGGT 59.969 61.111 0.00 0.00 0.00 4.00
48 49 2.281070 AAGGCACGCAGACAGGTG 60.281 61.111 0.00 0.00 37.22 4.00
49 50 2.715532 GAAGGCACGCAGACAGGTGA 62.716 60.000 0.00 0.00 36.25 4.02
50 51 2.280797 GGCACGCAGACAGGTGAA 60.281 61.111 0.00 0.00 36.25 3.18
51 52 1.891919 GGCACGCAGACAGGTGAAA 60.892 57.895 0.00 0.00 36.25 2.69
52 53 1.279840 GCACGCAGACAGGTGAAAC 59.720 57.895 0.00 0.00 36.25 2.78
67 68 4.871933 GTGAAACCCAATGAGAACCATT 57.128 40.909 0.00 0.00 45.88 3.16
68 69 5.213891 GTGAAACCCAATGAGAACCATTT 57.786 39.130 0.00 0.00 42.55 2.32
69 70 6.339587 GTGAAACCCAATGAGAACCATTTA 57.660 37.500 0.00 0.00 42.55 1.40
70 71 6.754193 GTGAAACCCAATGAGAACCATTTAA 58.246 36.000 0.00 0.00 42.55 1.52
71 72 6.645003 GTGAAACCCAATGAGAACCATTTAAC 59.355 38.462 0.00 0.00 42.55 2.01
80 81 6.817765 TGAGAACCATTTAACTCCATCAAC 57.182 37.500 0.00 0.00 0.00 3.18
87 88 5.183713 CCATTTAACTCCATCAACAGAGCAA 59.816 40.000 0.00 0.00 33.18 3.91
89 90 1.818642 ACTCCATCAACAGAGCAAGC 58.181 50.000 0.00 0.00 33.18 4.01
90 91 1.072806 ACTCCATCAACAGAGCAAGCA 59.927 47.619 0.00 0.00 33.18 3.91
111 112 7.059202 AGCATTTCATTCTTGAGTTTCCTTT 57.941 32.000 0.00 0.00 32.27 3.11
115 116 5.772825 TCATTCTTGAGTTTCCTTTGTGG 57.227 39.130 0.00 0.00 37.10 4.17
147 149 6.522625 TTTCTTCTTTGATTGTGTGTGGAA 57.477 33.333 0.00 0.00 0.00 3.53
148 150 6.713762 TTCTTCTTTGATTGTGTGTGGAAT 57.286 33.333 0.00 0.00 0.00 3.01
149 151 6.075762 TCTTCTTTGATTGTGTGTGGAATG 57.924 37.500 0.00 0.00 0.00 2.67
150 152 4.852134 TCTTTGATTGTGTGTGGAATGG 57.148 40.909 0.00 0.00 0.00 3.16
151 153 4.468713 TCTTTGATTGTGTGTGGAATGGA 58.531 39.130 0.00 0.00 0.00 3.41
152 154 4.278170 TCTTTGATTGTGTGTGGAATGGAC 59.722 41.667 0.00 0.00 0.00 4.02
172 174 1.134670 CGGGGGCTTTACTCTCTGAAG 60.135 57.143 0.00 0.00 0.00 3.02
210 212 1.688197 CATTGCCACCAATACCCATCC 59.312 52.381 0.00 0.00 39.60 3.51
211 213 0.707024 TTGCCACCAATACCCATCCA 59.293 50.000 0.00 0.00 0.00 3.41
212 214 0.932955 TGCCACCAATACCCATCCAT 59.067 50.000 0.00 0.00 0.00 3.41
213 215 1.133513 TGCCACCAATACCCATCCATC 60.134 52.381 0.00 0.00 0.00 3.51
214 216 1.896220 CCACCAATACCCATCCATCG 58.104 55.000 0.00 0.00 0.00 3.84
215 217 1.419762 CCACCAATACCCATCCATCGA 59.580 52.381 0.00 0.00 0.00 3.59
216 218 2.040278 CCACCAATACCCATCCATCGAT 59.960 50.000 0.00 0.00 0.00 3.59
217 219 3.338249 CACCAATACCCATCCATCGATC 58.662 50.000 0.00 0.00 0.00 3.69
218 220 3.008375 CACCAATACCCATCCATCGATCT 59.992 47.826 0.00 0.00 0.00 2.75
219 221 3.261897 ACCAATACCCATCCATCGATCTC 59.738 47.826 0.00 0.00 0.00 2.75
220 222 3.261643 CCAATACCCATCCATCGATCTCA 59.738 47.826 0.00 0.00 0.00 3.27
221 223 4.248859 CAATACCCATCCATCGATCTCAC 58.751 47.826 0.00 0.00 0.00 3.51
222 224 1.793414 ACCCATCCATCGATCTCACA 58.207 50.000 0.00 0.00 0.00 3.58
223 225 2.333069 ACCCATCCATCGATCTCACAT 58.667 47.619 0.00 0.00 0.00 3.21
224 226 2.301296 ACCCATCCATCGATCTCACATC 59.699 50.000 0.00 0.00 0.00 3.06
225 227 2.566279 CCCATCCATCGATCTCACATCT 59.434 50.000 0.00 0.00 0.00 2.90
226 228 3.007723 CCCATCCATCGATCTCACATCTT 59.992 47.826 0.00 0.00 0.00 2.40
227 229 4.504514 CCCATCCATCGATCTCACATCTTT 60.505 45.833 0.00 0.00 0.00 2.52
228 230 5.061853 CCATCCATCGATCTCACATCTTTT 58.938 41.667 0.00 0.00 0.00 2.27
229 231 5.530171 CCATCCATCGATCTCACATCTTTTT 59.470 40.000 0.00 0.00 0.00 1.94
259 261 5.588958 TGAGAAACATCGATCTCACATCT 57.411 39.130 11.50 3.10 45.27 2.90
282 284 7.655490 TCTAACGGGTAGATTTCTAACTATGC 58.345 38.462 0.00 0.00 36.43 3.14
298 300 0.393944 ATGCATCAGTGTGGAGCCTG 60.394 55.000 0.00 0.00 0.00 4.85
369 372 6.014070 GGACCACAATTAATTAAGGTGGGTTT 60.014 38.462 33.29 22.77 43.35 3.27
379 382 5.777850 TTAAGGTGGGTTTCTAAAAGCAC 57.222 39.130 4.27 0.00 0.00 4.40
439 445 3.375782 AATGTCTTGGCTTGCAAGAAC 57.624 42.857 30.39 20.68 39.96 3.01
445 451 1.484038 TGGCTTGCAAGAACCTGTTT 58.516 45.000 30.39 0.00 0.00 2.83
469 495 5.927954 TTAAGATGGGTACGTTGTTCAAC 57.072 39.130 0.00 5.70 0.00 3.18
476 502 3.058501 GGGTACGTTGTTCAACCATTCAG 60.059 47.826 9.62 0.00 33.46 3.02
528 554 3.691575 TCAACCACCACAGTTTTTGAGA 58.308 40.909 0.00 0.00 0.00 3.27
555 581 5.072055 TGACCATGACTCATTCACATTTGT 58.928 37.500 0.00 0.00 36.92 2.83
557 583 4.828939 ACCATGACTCATTCACATTTGTGT 59.171 37.500 10.30 0.00 45.76 3.72
561 587 8.676401 CCATGACTCATTCACATTTGTGTTATA 58.324 33.333 10.30 0.00 45.76 0.98
640 666 7.658575 AGTTTGGACTTTACACATAACATACGT 59.341 33.333 0.00 0.00 29.87 3.57
641 667 6.954616 TGGACTTTACACATAACATACGTG 57.045 37.500 0.00 0.00 36.70 4.49
642 668 6.457355 TGGACTTTACACATAACATACGTGT 58.543 36.000 0.00 0.00 45.42 4.49
656 751 5.616270 ACATACGTGTTGATATGCCCAATA 58.384 37.500 0.00 0.00 34.01 1.90
674 770 1.893315 TATCCAAAGTCCCCTGGGAG 58.107 55.000 16.20 4.42 46.16 4.30
675 771 0.921256 ATCCAAAGTCCCCTGGGAGG 60.921 60.000 16.20 3.43 46.16 4.30
676 772 2.356667 CAAAGTCCCCTGGGAGGC 59.643 66.667 16.20 5.96 46.16 4.70
694 790 1.597854 CCGCCTTGTCTCACAGCAA 60.598 57.895 0.00 0.00 0.00 3.91
891 987 6.101881 TCTCTCTCTCTCTCTCTCTCTCTCTA 59.898 46.154 0.00 0.00 0.00 2.43
893 989 6.718912 TCTCTCTCTCTCTCTCTCTCTCTATG 59.281 46.154 0.00 0.00 0.00 2.23
897 993 6.266330 TCTCTCTCTCTCTCTCTCTATGTGAG 59.734 46.154 0.00 0.00 43.96 3.51
910 1006 0.403271 ATGTGAGCTGAACTGGCCTT 59.597 50.000 3.32 0.00 0.00 4.35
926 1030 3.569701 TGGCCTTCTCACTCATTGTTTTC 59.430 43.478 3.32 0.00 0.00 2.29
932 1036 3.071023 TCTCACTCATTGTTTTCGTCCCT 59.929 43.478 0.00 0.00 0.00 4.20
939 1043 0.534203 TGTTTTCGTCCCTGCAGGTC 60.534 55.000 30.63 21.07 36.75 3.85
983 1087 8.459635 GCTGGAAGGTAATTAAAAAGAGGTTAG 58.540 37.037 0.00 0.00 0.00 2.34
1053 1345 1.804601 GTTCTTGGGAACGTGGGTAG 58.195 55.000 0.00 0.00 41.70 3.18
1064 1356 1.148310 CGTGGGTAGTCTTGCTGTTG 58.852 55.000 0.00 0.00 0.00 3.33
1334 1626 2.345641 CGCTTACCGAGTGATTTGACTG 59.654 50.000 0.00 0.00 38.15 3.51
1423 1715 6.972328 GCATAGACCGCTTGAAAATTGATTTA 59.028 34.615 0.00 0.00 0.00 1.40
1445 1746 8.681486 TTTAGATAATCAGGTTGTGGATGATG 57.319 34.615 0.00 0.00 34.02 3.07
1459 1760 7.071069 TGTGGATGATGCTGTAGAAGATTAT 57.929 36.000 0.00 0.00 0.00 1.28
1460 1761 6.932960 TGTGGATGATGCTGTAGAAGATTATG 59.067 38.462 0.00 0.00 0.00 1.90
1461 1762 7.157347 GTGGATGATGCTGTAGAAGATTATGA 58.843 38.462 0.00 0.00 0.00 2.15
1525 1826 3.724374 TGGTTTTGAGGACGAGTACAAG 58.276 45.455 0.00 0.00 0.00 3.16
1710 2011 7.856145 AGCTCAAGGTCATTGATTTACTAAG 57.144 36.000 0.00 0.00 46.71 2.18
1808 2110 6.105333 GGAAAGAAGATCCATGATATCCTCG 58.895 44.000 0.00 0.00 36.92 4.63
1903 2205 3.207669 GCCTTCCCAGATGCAGCG 61.208 66.667 0.00 0.00 0.00 5.18
1988 2290 1.479323 CCCATGTTCATGCTTTGAGGG 59.521 52.381 7.21 0.00 35.27 4.30
1997 2299 4.526970 TCATGCTTTGAGGGGTTTAGATC 58.473 43.478 0.00 0.00 0.00 2.75
1998 2300 3.366052 TGCTTTGAGGGGTTTAGATCC 57.634 47.619 0.00 0.00 0.00 3.36
2273 2575 6.182507 ACAAGGACTTACCAAATCACTACA 57.817 37.500 0.00 0.00 42.04 2.74
2338 2640 9.130312 GATTACATAATATCTGTGTCGGTTCTC 57.870 37.037 2.05 0.00 0.00 2.87
2387 2689 4.165950 TCATTCCACATACACCTAGGCATT 59.834 41.667 9.30 0.00 0.00 3.56
2484 2786 2.260844 ATACATGAATGTGCCGAGGG 57.739 50.000 0.00 0.00 41.89 4.30
2596 2911 2.225650 TGAGCTACCTTCCCCTCTTCTT 60.226 50.000 0.00 0.00 0.00 2.52
2661 3753 3.275617 AGTGTGTGTGTGAGGCTTTTA 57.724 42.857 0.00 0.00 0.00 1.52
2728 3821 5.178996 GTGCATCATCATCTCATAACCAGAC 59.821 44.000 0.00 0.00 0.00 3.51
2754 3847 7.795482 TTCTATCGTTCTTCTTTCCAAAACA 57.205 32.000 0.00 0.00 0.00 2.83
2786 3879 4.742167 CAGATCTTACACGCATCACCTAAG 59.258 45.833 0.00 0.00 0.00 2.18
2798 3891 4.741837 GCATCACCTAAGCTCAGAGCATTA 60.742 45.833 24.64 16.81 45.56 1.90
2815 3911 5.482006 AGCATTATTTGGCTTTGGACTTTC 58.518 37.500 0.00 0.00 36.92 2.62
2816 3912 5.011943 AGCATTATTTGGCTTTGGACTTTCA 59.988 36.000 0.00 0.00 36.92 2.69
2817 3913 5.876460 GCATTATTTGGCTTTGGACTTTCAT 59.124 36.000 0.00 0.00 0.00 2.57
2818 3914 6.036408 GCATTATTTGGCTTTGGACTTTCATC 59.964 38.462 0.00 0.00 0.00 2.92
2819 3915 6.662865 TTATTTGGCTTTGGACTTTCATCA 57.337 33.333 0.00 0.00 0.00 3.07
2820 3916 5.750352 ATTTGGCTTTGGACTTTCATCAT 57.250 34.783 0.00 0.00 0.00 2.45
2821 3917 4.789012 TTGGCTTTGGACTTTCATCATC 57.211 40.909 0.00 0.00 0.00 2.92
2822 3918 3.765381 TGGCTTTGGACTTTCATCATCA 58.235 40.909 0.00 0.00 0.00 3.07
2823 3919 3.760151 TGGCTTTGGACTTTCATCATCAG 59.240 43.478 0.00 0.00 0.00 2.90
2824 3920 3.760684 GGCTTTGGACTTTCATCATCAGT 59.239 43.478 0.00 0.00 0.00 3.41
2825 3921 4.943705 GGCTTTGGACTTTCATCATCAGTA 59.056 41.667 0.00 0.00 0.00 2.74
2826 3922 5.591877 GGCTTTGGACTTTCATCATCAGTAT 59.408 40.000 0.00 0.00 0.00 2.12
2827 3923 6.238593 GGCTTTGGACTTTCATCATCAGTATC 60.239 42.308 0.00 0.00 0.00 2.24
2828 3924 6.317140 GCTTTGGACTTTCATCATCAGTATCA 59.683 38.462 0.00 0.00 0.00 2.15
2829 3925 7.466996 GCTTTGGACTTTCATCATCAGTATCAG 60.467 40.741 0.00 0.00 0.00 2.90
2864 3960 3.828875 CCTGAGCTAAGGTTCCTAAGG 57.171 52.381 9.30 0.00 32.17 2.69
2950 4046 0.311165 CGACACGTGAGGTTGAGAGT 59.689 55.000 25.01 0.00 0.00 3.24
2953 4049 2.553172 GACACGTGAGGTTGAGAGTACT 59.447 50.000 25.01 0.00 0.00 2.73
2958 4054 3.193691 CGTGAGGTTGAGAGTACTTGGAT 59.806 47.826 0.00 0.00 0.00 3.41
3008 4104 9.643693 AGGAAACTCATTTATTTGCAAACTATG 57.356 29.630 15.41 16.75 32.90 2.23
3037 4148 6.236017 ACCACGTTGTTTGTATGTATCAAG 57.764 37.500 0.00 0.00 0.00 3.02
3038 4149 5.086058 CCACGTTGTTTGTATGTATCAAGC 58.914 41.667 0.00 0.00 0.00 4.01
3039 4150 5.106712 CCACGTTGTTTGTATGTATCAAGCT 60.107 40.000 0.00 0.00 0.00 3.74
3040 4151 6.015504 CACGTTGTTTGTATGTATCAAGCTC 58.984 40.000 0.00 0.00 0.00 4.09
3041 4152 5.121768 ACGTTGTTTGTATGTATCAAGCTCC 59.878 40.000 0.00 0.00 0.00 4.70
3042 4153 5.447279 CGTTGTTTGTATGTATCAAGCTCCC 60.447 44.000 0.00 0.00 0.00 4.30
3103 4214 5.690865 TCTTTCTAGTTTTCCTCTGCCAAA 58.309 37.500 0.00 0.00 0.00 3.28
3110 4221 0.884704 TTCCTCTGCCAAAGCGTGTC 60.885 55.000 0.00 0.00 44.31 3.67
3119 4230 1.665735 CCAAAGCGTGTCCAAATTCCG 60.666 52.381 0.00 0.00 0.00 4.30
3122 4233 1.154225 GCGTGTCCAAATTCCGCAG 60.154 57.895 0.00 0.00 43.53 5.18
3129 4240 2.678336 GTCCAAATTCCGCAGAACCTAG 59.322 50.000 0.00 0.00 33.97 3.02
3132 4243 2.317530 AATTCCGCAGAACCTAGAGC 57.682 50.000 0.00 0.00 33.97 4.09
3138 4249 1.135139 CGCAGAACCTAGAGCAGCTTA 59.865 52.381 0.00 0.00 0.00 3.09
3239 4350 8.006298 TGGAGTTGCAATATTATAAACCCAAG 57.994 34.615 0.59 0.00 0.00 3.61
3305 4416 3.636153 ATACTTGAGGGCTGTTCCTTC 57.364 47.619 0.00 0.00 41.08 3.46
3384 4504 0.253630 TTGTAGGCTGGGGGAAGGAT 60.254 55.000 0.00 0.00 0.00 3.24
3426 4546 1.776662 TCCATCCCTCAGGTTCGTAG 58.223 55.000 0.00 0.00 0.00 3.51
3430 4550 1.344065 TCCCTCAGGTTCGTAGCAAA 58.656 50.000 0.00 0.00 0.00 3.68
3452 4581 4.660168 AGGTTCTTGCACAAGATCATTCT 58.340 39.130 13.54 4.04 45.78 2.40
3606 4751 2.621998 CCTTTTGCAGATCATAGGGCTG 59.378 50.000 0.00 0.00 0.00 4.85
3609 4754 2.627515 TGCAGATCATAGGGCTGTTC 57.372 50.000 0.00 0.00 32.39 3.18
3612 4757 1.688735 CAGATCATAGGGCTGTTCGGA 59.311 52.381 0.00 0.00 0.00 4.55
3613 4758 2.103094 CAGATCATAGGGCTGTTCGGAA 59.897 50.000 0.00 0.00 0.00 4.30
3614 4759 2.366916 AGATCATAGGGCTGTTCGGAAG 59.633 50.000 0.00 0.00 0.00 3.46
3615 4760 1.860641 TCATAGGGCTGTTCGGAAGA 58.139 50.000 0.00 0.00 39.20 2.87
3616 4761 1.757118 TCATAGGGCTGTTCGGAAGAG 59.243 52.381 10.32 10.32 43.69 2.85
3617 4762 1.757118 CATAGGGCTGTTCGGAAGAGA 59.243 52.381 18.07 0.00 43.69 3.10
3618 4763 1.933021 TAGGGCTGTTCGGAAGAGAA 58.067 50.000 18.07 0.00 43.69 2.87
3619 4764 0.610687 AGGGCTGTTCGGAAGAGAAG 59.389 55.000 18.07 2.76 43.69 2.85
3623 4768 2.675348 GGCTGTTCGGAAGAGAAGAATG 59.325 50.000 18.07 0.00 43.69 2.67
3624 4769 2.095053 GCTGTTCGGAAGAGAAGAATGC 59.905 50.000 18.07 0.00 43.69 3.56
3625 4770 3.594134 CTGTTCGGAAGAGAAGAATGCT 58.406 45.455 9.13 0.00 43.69 3.79
3626 4771 4.748892 CTGTTCGGAAGAGAAGAATGCTA 58.251 43.478 9.13 0.00 43.69 3.49
3627 4772 4.495422 TGTTCGGAAGAGAAGAATGCTAC 58.505 43.478 0.00 0.00 43.69 3.58
3628 4773 4.220821 TGTTCGGAAGAGAAGAATGCTACT 59.779 41.667 0.00 0.00 43.69 2.57
3629 4774 5.417894 TGTTCGGAAGAGAAGAATGCTACTA 59.582 40.000 0.00 0.00 43.69 1.82
3630 4775 5.759506 TCGGAAGAGAAGAATGCTACTAG 57.240 43.478 0.00 0.00 34.84 2.57
3631 4776 5.194432 TCGGAAGAGAAGAATGCTACTAGT 58.806 41.667 0.00 0.00 34.84 2.57
3632 4777 5.066634 TCGGAAGAGAAGAATGCTACTAGTG 59.933 44.000 5.39 0.00 34.84 2.74
3633 4778 5.047188 GGAAGAGAAGAATGCTACTAGTGC 58.953 45.833 5.39 7.95 0.00 4.40
3634 4779 4.664150 AGAGAAGAATGCTACTAGTGCC 57.336 45.455 5.39 0.00 0.00 5.01
3635 4780 4.285863 AGAGAAGAATGCTACTAGTGCCT 58.714 43.478 5.39 0.00 0.00 4.75
3636 4781 4.714308 AGAGAAGAATGCTACTAGTGCCTT 59.286 41.667 5.39 6.59 0.00 4.35
3637 4782 5.188751 AGAGAAGAATGCTACTAGTGCCTTT 59.811 40.000 5.39 4.34 0.00 3.11
3639 4784 5.877564 AGAAGAATGCTACTAGTGCCTTTTC 59.122 40.000 5.39 9.99 0.00 2.29
3640 4785 5.428184 AGAATGCTACTAGTGCCTTTTCT 57.572 39.130 5.39 11.71 0.00 2.52
3641 4786 5.181748 AGAATGCTACTAGTGCCTTTTCTG 58.818 41.667 5.39 0.00 0.00 3.02
3642 4787 4.559862 ATGCTACTAGTGCCTTTTCTGT 57.440 40.909 5.39 0.00 0.00 3.41
3643 4788 4.351874 TGCTACTAGTGCCTTTTCTGTT 57.648 40.909 5.39 0.00 0.00 3.16
3645 4790 6.049955 TGCTACTAGTGCCTTTTCTGTTAT 57.950 37.500 5.39 0.00 0.00 1.89
3651 4796 7.553334 ACTAGTGCCTTTTCTGTTATTCGATA 58.447 34.615 0.00 0.00 0.00 2.92
3659 4804 7.934120 CCTTTTCTGTTATTCGATATTCTCCCT 59.066 37.037 0.00 0.00 0.00 4.20
3677 4822 2.170607 CCCTGCCGGAGAAGAAGAATAA 59.829 50.000 5.05 0.00 0.00 1.40
3678 4823 3.198872 CCTGCCGGAGAAGAAGAATAAC 58.801 50.000 5.05 0.00 0.00 1.89
3679 4824 2.860735 CTGCCGGAGAAGAAGAATAACG 59.139 50.000 5.05 0.00 0.00 3.18
3689 4834 7.432838 GGAGAAGAAGAATAACGCTACTAGTTG 59.567 40.741 0.00 0.00 33.42 3.16
3690 4835 8.053026 AGAAGAAGAATAACGCTACTAGTTGA 57.947 34.615 8.60 0.00 33.42 3.18
3691 4836 8.521176 AGAAGAAGAATAACGCTACTAGTTGAA 58.479 33.333 8.60 0.00 33.42 2.69
3693 4838 8.690680 AGAAGAATAACGCTACTAGTTGAAAG 57.309 34.615 8.60 0.00 33.42 2.62
3695 4840 5.811100 AGAATAACGCTACTAGTTGAAAGGC 59.189 40.000 8.60 0.52 33.42 4.35
3696 4841 3.396260 AACGCTACTAGTTGAAAGGCA 57.604 42.857 8.60 0.00 0.00 4.75
3697 4842 3.611766 ACGCTACTAGTTGAAAGGCAT 57.388 42.857 8.60 0.00 0.00 4.40
3713 4914 4.322057 AGGCATTTATGGTCCTTTCAGT 57.678 40.909 0.00 0.00 0.00 3.41
3724 4925 1.289109 CCTTTCAGTGTACGCCCGTG 61.289 60.000 1.98 0.00 0.00 4.94
3758 4975 2.161855 GGCTGAACCAATGTGTGATCA 58.838 47.619 0.00 0.00 38.86 2.92
3759 4976 2.756760 GGCTGAACCAATGTGTGATCAT 59.243 45.455 0.00 0.00 38.86 2.45
3774 5022 8.541133 TGTGTGATCATTTGAGTATTTCGTAA 57.459 30.769 0.00 0.00 0.00 3.18
3775 5023 8.655970 TGTGTGATCATTTGAGTATTTCGTAAG 58.344 33.333 0.00 0.00 0.00 2.34
3776 5024 8.656849 GTGTGATCATTTGAGTATTTCGTAAGT 58.343 33.333 0.00 0.00 39.48 2.24
3822 5070 7.838696 TCCTGTATTGGGATTATCACAAACAAT 59.161 33.333 14.21 8.30 43.81 2.71
3824 5072 8.586879 TGTATTGGGATTATCACAAACAATCA 57.413 30.769 14.21 6.53 43.81 2.57
3825 5073 9.199645 TGTATTGGGATTATCACAAACAATCAT 57.800 29.630 14.21 0.00 43.81 2.45
3828 5076 7.337480 TGGGATTATCACAAACAATCATCAG 57.663 36.000 0.00 0.00 31.61 2.90
3829 5077 7.118060 TGGGATTATCACAAACAATCATCAGA 58.882 34.615 0.00 0.00 31.61 3.27
3831 5079 8.295288 GGGATTATCACAAACAATCATCAGATC 58.705 37.037 0.00 0.00 31.90 2.75
3832 5080 8.843262 GGATTATCACAAACAATCATCAGATCA 58.157 33.333 0.00 0.00 31.90 2.92
3860 5165 4.111916 CAATCACTTCCGCAACAAAGTTT 58.888 39.130 0.00 0.00 33.53 2.66
3958 5351 4.324402 GCTTAAATGACAGCAATTTCGGTG 59.676 41.667 0.00 0.00 40.25 4.94
4036 5454 1.065647 ATAGATGCATCCTGGCTGCT 58.934 50.000 23.06 8.79 40.34 4.24
4089 5507 5.375283 TCACTACTAGTAGCAGGTCAGAT 57.625 43.478 26.54 4.17 36.66 2.90
4092 5510 6.056236 CACTACTAGTAGCAGGTCAGATACA 58.944 44.000 26.54 0.00 36.66 2.29
4109 5527 4.466370 AGATACAGAGACACCAAAATCCGA 59.534 41.667 0.00 0.00 0.00 4.55
4197 6702 3.123621 CAGAGAACTGCGATGTGGTAAAC 59.876 47.826 0.00 0.00 37.33 2.01
4210 6715 5.375417 TGTGGTAAACAATCTGAAGCATG 57.625 39.130 0.00 0.00 35.24 4.06
4214 6719 9.594093 TGTGGTAAACAATCTGAAGCATGCTTC 62.594 40.741 40.96 40.96 43.11 3.86
4244 8810 2.911926 GCAACAGCCTTCCCCTCCT 61.912 63.158 0.00 0.00 0.00 3.69
4275 8841 3.133464 CGGCGTGGCATTGACCAT 61.133 61.111 0.00 0.00 43.01 3.55
4276 8842 2.800736 GGCGTGGCATTGACCATC 59.199 61.111 0.00 0.64 43.01 3.51
4277 8843 2.774799 GGCGTGGCATTGACCATCC 61.775 63.158 0.00 5.01 43.01 3.51
4278 8844 2.774799 GCGTGGCATTGACCATCCC 61.775 63.158 0.00 0.00 43.01 3.85
4279 8845 2.120909 CGTGGCATTGACCATCCCC 61.121 63.158 0.00 0.00 43.01 4.81
4280 8846 1.000233 GTGGCATTGACCATCCCCA 60.000 57.895 0.00 0.00 43.01 4.96
4281 8847 0.397535 GTGGCATTGACCATCCCCAT 60.398 55.000 0.00 0.00 43.01 4.00
4282 8848 0.397394 TGGCATTGACCATCCCCATG 60.397 55.000 0.00 0.00 33.75 3.66
4289 8855 3.170672 CCATCCCCATGGCCTCGA 61.171 66.667 6.09 0.00 43.55 4.04
4290 8856 2.111878 CATCCCCATGGCCTCGAC 59.888 66.667 6.09 0.00 0.00 4.20
4291 8857 3.550431 ATCCCCATGGCCTCGACG 61.550 66.667 6.09 0.00 0.00 5.12
4292 8858 4.770362 TCCCCATGGCCTCGACGA 62.770 66.667 6.09 0.00 0.00 4.20
4293 8859 4.227134 CCCCATGGCCTCGACGAG 62.227 72.222 18.08 18.08 0.00 4.18
4304 8870 4.796231 CGACGAGGACCAAGGCCG 62.796 72.222 0.00 0.00 0.00 6.13
4310 8876 4.660938 GGACCAAGGCCGCCTGTT 62.661 66.667 14.19 0.00 32.13 3.16
4323 8889 2.338500 CGCCTGTTTCTGAACTACTCC 58.662 52.381 0.00 0.00 36.70 3.85
4325 8891 2.303311 GCCTGTTTCTGAACTACTCCCT 59.697 50.000 0.00 0.00 36.70 4.20
4326 8892 3.617775 GCCTGTTTCTGAACTACTCCCTC 60.618 52.174 0.00 0.00 36.70 4.30
4328 8894 4.322349 CCTGTTTCTGAACTACTCCCTCTG 60.322 50.000 0.00 0.00 36.70 3.35
4329 8895 4.223953 TGTTTCTGAACTACTCCCTCTGT 58.776 43.478 0.00 0.00 36.70 3.41
4331 8897 3.088789 TCTGAACTACTCCCTCTGTCC 57.911 52.381 0.00 0.00 0.00 4.02
4332 8898 2.104170 CTGAACTACTCCCTCTGTCCC 58.896 57.143 0.00 0.00 0.00 4.46
4333 8899 1.717077 TGAACTACTCCCTCTGTCCCT 59.283 52.381 0.00 0.00 0.00 4.20
4334 8900 2.291670 TGAACTACTCCCTCTGTCCCTC 60.292 54.545 0.00 0.00 0.00 4.30
4335 8901 1.688750 ACTACTCCCTCTGTCCCTCT 58.311 55.000 0.00 0.00 0.00 3.69
4336 8902 1.286553 ACTACTCCCTCTGTCCCTCTG 59.713 57.143 0.00 0.00 0.00 3.35
4339 8905 0.686112 CTCCCTCTGTCCCTCTGTCC 60.686 65.000 0.00 0.00 0.00 4.02
4341 8907 1.079256 CCTCTGTCCCTCTGTCCCA 59.921 63.158 0.00 0.00 0.00 4.37
4343 8909 1.352083 CTCTGTCCCTCTGTCCCAAA 58.648 55.000 0.00 0.00 0.00 3.28
4344 8910 1.699634 CTCTGTCCCTCTGTCCCAAAA 59.300 52.381 0.00 0.00 0.00 2.44
4345 8911 2.307098 CTCTGTCCCTCTGTCCCAAAAT 59.693 50.000 0.00 0.00 0.00 1.82
4346 8912 3.519510 CTCTGTCCCTCTGTCCCAAAATA 59.480 47.826 0.00 0.00 0.00 1.40
4348 8914 5.285401 TCTGTCCCTCTGTCCCAAAATATA 58.715 41.667 0.00 0.00 0.00 0.86
4350 8916 6.001449 TGTCCCTCTGTCCCAAAATATAAG 57.999 41.667 0.00 0.00 0.00 1.73
4351 8917 5.729229 TGTCCCTCTGTCCCAAAATATAAGA 59.271 40.000 0.00 0.00 0.00 2.10
4352 8918 6.216662 TGTCCCTCTGTCCCAAAATATAAGAA 59.783 38.462 0.00 0.00 0.00 2.52
4353 8919 6.542735 GTCCCTCTGTCCCAAAATATAAGAAC 59.457 42.308 0.00 0.00 0.00 3.01
4354 8920 5.828328 CCCTCTGTCCCAAAATATAAGAACC 59.172 44.000 0.00 0.00 0.00 3.62
4355 8921 6.353951 CCCTCTGTCCCAAAATATAAGAACCT 60.354 42.308 0.00 0.00 0.00 3.50
4356 8922 7.147373 CCCTCTGTCCCAAAATATAAGAACCTA 60.147 40.741 0.00 0.00 0.00 3.08
4357 8923 8.272173 CCTCTGTCCCAAAATATAAGAACCTAA 58.728 37.037 0.00 0.00 0.00 2.69
4360 8926 7.396418 TGTCCCAAAATATAAGAACCTAACGT 58.604 34.615 0.00 0.00 0.00 3.99
4361 8927 7.884354 TGTCCCAAAATATAAGAACCTAACGTT 59.116 33.333 5.88 5.88 37.41 3.99
4375 8941 8.496707 GAACCTAACGTTCTTATATTTTGGGA 57.503 34.615 2.82 0.00 46.33 4.37
4376 8942 7.854557 ACCTAACGTTCTTATATTTTGGGAC 57.145 36.000 2.82 0.00 0.00 4.46
4377 8943 6.536224 ACCTAACGTTCTTATATTTTGGGACG 59.464 38.462 2.82 0.00 0.00 4.79
4378 8944 5.806366 AACGTTCTTATATTTTGGGACGG 57.194 39.130 0.00 0.00 0.00 4.79
4379 8945 5.088680 ACGTTCTTATATTTTGGGACGGA 57.911 39.130 0.00 0.00 0.00 4.69
4380 8946 5.114081 ACGTTCTTATATTTTGGGACGGAG 58.886 41.667 0.00 0.00 0.00 4.63
4382 8948 4.699925 TCTTATATTTTGGGACGGAGGG 57.300 45.455 0.00 0.00 0.00 4.30
4383 8949 4.300345 TCTTATATTTTGGGACGGAGGGA 58.700 43.478 0.00 0.00 0.00 4.20
4384 8950 4.347000 TCTTATATTTTGGGACGGAGGGAG 59.653 45.833 0.00 0.00 0.00 4.30
4385 8951 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
4386 8952 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
4387 8953 1.272807 TTTTGGGACGGAGGGAGTAG 58.727 55.000 0.00 0.00 0.00 2.57
4392 9036 1.133544 GGGACGGAGGGAGTAGTACAT 60.134 57.143 2.52 0.00 0.00 2.29
4417 9061 2.507484 CAGACCACCTGCTGAATTTGA 58.493 47.619 0.00 0.00 35.89 2.69
4418 9062 2.886523 CAGACCACCTGCTGAATTTGAA 59.113 45.455 0.00 0.00 35.89 2.69
4419 9063 3.508793 CAGACCACCTGCTGAATTTGAAT 59.491 43.478 0.00 0.00 35.89 2.57
4420 9064 4.021719 CAGACCACCTGCTGAATTTGAATT 60.022 41.667 0.00 0.00 35.89 2.17
4421 9065 4.219288 AGACCACCTGCTGAATTTGAATTC 59.781 41.667 9.05 9.05 43.91 2.17
4435 9079 3.423539 TGAATTCCTGGAGGTGAACAG 57.576 47.619 2.27 0.00 36.34 3.16
4442 9086 4.620723 TCCTGGAGGTGAACAGTACATAT 58.379 43.478 0.00 0.00 36.34 1.78
4450 9096 7.309255 GGAGGTGAACAGTACATATATCGATGT 60.309 40.741 8.54 3.54 42.68 3.06
4477 9123 0.746923 TGCATCAGAGACAGCCATGC 60.747 55.000 0.00 0.00 40.29 4.06
4483 9129 0.689055 AGAGACAGCCATGCAGACAA 59.311 50.000 0.00 0.00 0.00 3.18
4484 9130 1.072806 AGAGACAGCCATGCAGACAAA 59.927 47.619 0.00 0.00 0.00 2.83
4485 9131 1.198637 GAGACAGCCATGCAGACAAAC 59.801 52.381 0.00 0.00 0.00 2.93
4486 9132 0.953727 GACAGCCATGCAGACAAACA 59.046 50.000 0.00 0.00 0.00 2.83
4511 9157 4.467084 TGCAGGAACGGGCGATCC 62.467 66.667 0.00 0.00 37.34 3.36
4525 9193 2.289945 GGCGATCCTCAGGATTTGCTAT 60.290 50.000 23.84 0.00 43.27 2.97
4533 9201 4.441079 CCTCAGGATTTGCTATTGGCTTTG 60.441 45.833 0.00 0.00 42.39 2.77
4538 9206 1.259609 TTGCTATTGGCTTTGCTGCT 58.740 45.000 0.00 0.00 42.39 4.24
4539 9207 0.528924 TGCTATTGGCTTTGCTGCTG 59.471 50.000 0.00 0.00 42.39 4.41
4540 9208 0.813184 GCTATTGGCTTTGCTGCTGA 59.187 50.000 0.00 0.00 38.06 4.26
4541 9209 1.407979 GCTATTGGCTTTGCTGCTGAT 59.592 47.619 0.00 0.00 38.06 2.90
4543 9211 0.108329 ATTGGCTTTGCTGCTGATGC 60.108 50.000 0.00 3.79 40.20 3.91
4553 9221 2.789842 TGCTGATGCAGGAGATTGC 58.210 52.632 0.00 0.00 45.31 3.56
4555 9223 1.783031 GCTGATGCAGGAGATTGCCG 61.783 60.000 0.00 0.00 43.43 5.69
4558 9226 0.179062 GATGCAGGAGATTGCCGAGT 60.179 55.000 0.00 0.00 43.43 4.18
4559 9227 1.069204 GATGCAGGAGATTGCCGAGTA 59.931 52.381 0.00 0.00 43.43 2.59
4560 9228 0.901827 TGCAGGAGATTGCCGAGTAA 59.098 50.000 0.00 0.00 43.43 2.24
4562 9230 2.139118 GCAGGAGATTGCCGAGTAATC 58.861 52.381 6.61 6.61 38.13 1.75
4563 9231 2.483714 GCAGGAGATTGCCGAGTAATCA 60.484 50.000 13.89 0.00 37.17 2.57
4565 9233 2.103263 AGGAGATTGCCGAGTAATCACC 59.897 50.000 16.57 16.57 42.20 4.02
4566 9234 2.128035 GAGATTGCCGAGTAATCACCG 58.872 52.381 13.89 0.00 37.17 4.94
4569 9237 1.179152 TTGCCGAGTAATCACCGAGA 58.821 50.000 0.00 0.00 0.00 4.04
4570 9238 0.454600 TGCCGAGTAATCACCGAGAC 59.545 55.000 0.00 0.00 0.00 3.36
4571 9239 0.591741 GCCGAGTAATCACCGAGACG 60.592 60.000 0.00 0.00 0.00 4.18
4591 9447 4.752879 TGGGCGCGGTTACTCTGC 62.753 66.667 8.83 0.00 44.34 4.26
4599 9455 1.156736 CGGTTACTCTGCTTTGGTGG 58.843 55.000 0.00 0.00 0.00 4.61
4619 9475 1.285023 GCTGTGCCACTCTGCTTTG 59.715 57.895 0.00 0.00 0.00 2.77
4633 9489 4.819769 TCTGCTTTGCAAACTCTGTTTTT 58.180 34.783 8.05 0.00 38.41 1.94
4657 9513 7.971183 TTTTTAAACCTGCAAACTCTGTTTT 57.029 28.000 0.00 0.00 32.02 2.43
4659 9515 8.696410 TTTTAAACCTGCAAACTCTGTTTTAG 57.304 30.769 0.00 0.00 32.02 1.85
4660 9516 7.633193 TTAAACCTGCAAACTCTGTTTTAGA 57.367 32.000 0.00 0.00 32.02 2.10
4661 9517 5.500645 AACCTGCAAACTCTGTTTTAGAC 57.499 39.130 0.00 0.00 0.00 2.59
4662 9518 4.523083 ACCTGCAAACTCTGTTTTAGACA 58.477 39.130 0.00 0.00 36.65 3.41
4718 9574 1.627864 CGGGTTCCCCAAGAAAACAT 58.372 50.000 1.93 0.00 45.83 2.71
4719 9575 2.555670 CCGGGTTCCCCAAGAAAACATA 60.556 50.000 0.00 0.00 45.83 2.29
4721 9577 2.496070 GGGTTCCCCAAGAAAACATAGC 59.504 50.000 0.00 0.00 44.65 2.97
4730 9586 4.631377 CCAAGAAAACATAGCATGACGAGA 59.369 41.667 0.00 0.00 0.00 4.04
4731 9587 5.122239 CCAAGAAAACATAGCATGACGAGAA 59.878 40.000 0.00 0.00 0.00 2.87
4732 9588 6.348458 CCAAGAAAACATAGCATGACGAGAAA 60.348 38.462 0.00 0.00 0.00 2.52
4734 9590 7.009568 AGAAAACATAGCATGACGAGAAATC 57.990 36.000 0.00 0.00 0.00 2.17
4738 9683 6.296365 ACATAGCATGACGAGAAATCATTG 57.704 37.500 0.00 0.00 34.49 2.82
4750 9695 6.473778 ACGAGAAATCATTGTTATCAGTCGAG 59.526 38.462 0.00 0.00 0.00 4.04
4751 9696 6.473778 CGAGAAATCATTGTTATCAGTCGAGT 59.526 38.462 0.00 0.00 0.00 4.18
4754 9699 3.179048 TCATTGTTATCAGTCGAGTGCG 58.821 45.455 15.66 0.00 39.35 5.34
4764 9709 2.372919 TCGAGTGCGATCACATTGC 58.627 52.632 0.00 0.00 45.49 3.56
4769 9714 3.230115 TGCGATCACATTGCACAGA 57.770 47.368 0.00 0.00 44.46 3.41
4770 9715 0.798159 TGCGATCACATTGCACAGAC 59.202 50.000 0.00 0.00 44.46 3.51
4771 9716 0.798159 GCGATCACATTGCACAGACA 59.202 50.000 0.00 0.00 39.53 3.41
4775 9720 3.058708 CGATCACATTGCACAGACAAGTT 60.059 43.478 0.00 0.00 31.96 2.66
4779 9724 4.881273 TCACATTGCACAGACAAGTTACTT 59.119 37.500 0.00 0.00 31.96 2.24
4781 9726 6.202762 TCACATTGCACAGACAAGTTACTTAG 59.797 38.462 0.00 0.00 31.96 2.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.667724 GCCCAACATCTTCGTCATCTG 59.332 52.381 0.00 0.00 0.00 2.90
1 2 1.556911 AGCCCAACATCTTCGTCATCT 59.443 47.619 0.00 0.00 0.00 2.90
2 3 1.667724 CAGCCCAACATCTTCGTCATC 59.332 52.381 0.00 0.00 0.00 2.92
3 4 1.278985 TCAGCCCAACATCTTCGTCAT 59.721 47.619 0.00 0.00 0.00 3.06
4 5 0.684535 TCAGCCCAACATCTTCGTCA 59.315 50.000 0.00 0.00 0.00 4.35
5 6 1.079503 GTCAGCCCAACATCTTCGTC 58.920 55.000 0.00 0.00 0.00 4.20
6 7 0.687354 AGTCAGCCCAACATCTTCGT 59.313 50.000 0.00 0.00 0.00 3.85
7 8 1.081892 CAGTCAGCCCAACATCTTCG 58.918 55.000 0.00 0.00 0.00 3.79
8 9 2.479566 TCAGTCAGCCCAACATCTTC 57.520 50.000 0.00 0.00 0.00 2.87
9 10 2.508526 GTTCAGTCAGCCCAACATCTT 58.491 47.619 0.00 0.00 0.00 2.40
10 11 1.609061 CGTTCAGTCAGCCCAACATCT 60.609 52.381 0.00 0.00 0.00 2.90
11 12 0.798776 CGTTCAGTCAGCCCAACATC 59.201 55.000 0.00 0.00 0.00 3.06
12 13 0.396435 TCGTTCAGTCAGCCCAACAT 59.604 50.000 0.00 0.00 0.00 2.71
13 14 0.179234 TTCGTTCAGTCAGCCCAACA 59.821 50.000 0.00 0.00 0.00 3.33
14 15 0.868406 CTTCGTTCAGTCAGCCCAAC 59.132 55.000 0.00 0.00 0.00 3.77
15 16 0.250295 CCTTCGTTCAGTCAGCCCAA 60.250 55.000 0.00 0.00 0.00 4.12
16 17 1.371183 CCTTCGTTCAGTCAGCCCA 59.629 57.895 0.00 0.00 0.00 5.36
17 18 2.035442 GCCTTCGTTCAGTCAGCCC 61.035 63.158 0.00 0.00 0.00 5.19
18 19 1.301716 TGCCTTCGTTCAGTCAGCC 60.302 57.895 0.00 0.00 0.00 4.85
19 20 1.862806 GTGCCTTCGTTCAGTCAGC 59.137 57.895 0.00 0.00 0.00 4.26
20 21 1.891060 GCGTGCCTTCGTTCAGTCAG 61.891 60.000 0.00 0.00 0.00 3.51
21 22 1.954146 GCGTGCCTTCGTTCAGTCA 60.954 57.895 0.00 0.00 0.00 3.41
22 23 1.891060 CTGCGTGCCTTCGTTCAGTC 61.891 60.000 0.00 0.00 0.00 3.51
23 24 1.956170 CTGCGTGCCTTCGTTCAGT 60.956 57.895 0.00 0.00 0.00 3.41
24 25 1.664649 TCTGCGTGCCTTCGTTCAG 60.665 57.895 0.00 0.00 0.00 3.02
25 26 1.954146 GTCTGCGTGCCTTCGTTCA 60.954 57.895 0.00 0.00 0.00 3.18
26 27 1.891060 CTGTCTGCGTGCCTTCGTTC 61.891 60.000 0.00 0.00 0.00 3.95
27 28 1.956170 CTGTCTGCGTGCCTTCGTT 60.956 57.895 0.00 0.00 0.00 3.85
28 29 2.356313 CTGTCTGCGTGCCTTCGT 60.356 61.111 0.00 0.00 0.00 3.85
29 30 3.114616 CCTGTCTGCGTGCCTTCG 61.115 66.667 0.00 0.00 0.00 3.79
30 31 2.031163 ACCTGTCTGCGTGCCTTC 59.969 61.111 0.00 0.00 0.00 3.46
31 32 2.281070 CACCTGTCTGCGTGCCTT 60.281 61.111 0.00 0.00 0.00 4.35
32 33 2.324014 TTTCACCTGTCTGCGTGCCT 62.324 55.000 0.00 0.00 0.00 4.75
33 34 1.891919 TTTCACCTGTCTGCGTGCC 60.892 57.895 0.00 0.00 0.00 5.01
34 35 1.279840 GTTTCACCTGTCTGCGTGC 59.720 57.895 0.00 0.00 0.00 5.34
35 36 1.507141 GGGTTTCACCTGTCTGCGTG 61.507 60.000 0.00 0.00 38.64 5.34
36 37 1.227853 GGGTTTCACCTGTCTGCGT 60.228 57.895 0.00 0.00 38.64 5.24
37 38 0.817634 TTGGGTTTCACCTGTCTGCG 60.818 55.000 0.00 0.00 38.64 5.18
38 39 1.270550 CATTGGGTTTCACCTGTCTGC 59.729 52.381 0.00 0.00 38.64 4.26
39 40 2.816087 CTCATTGGGTTTCACCTGTCTG 59.184 50.000 0.00 0.00 38.64 3.51
40 41 2.711009 TCTCATTGGGTTTCACCTGTCT 59.289 45.455 0.00 0.00 38.64 3.41
41 42 3.140325 TCTCATTGGGTTTCACCTGTC 57.860 47.619 0.00 0.00 38.64 3.51
42 43 3.222603 GTTCTCATTGGGTTTCACCTGT 58.777 45.455 0.00 0.00 38.64 4.00
43 44 2.558359 GGTTCTCATTGGGTTTCACCTG 59.442 50.000 0.00 0.00 38.64 4.00
44 45 2.176798 TGGTTCTCATTGGGTTTCACCT 59.823 45.455 0.00 0.00 38.64 4.00
45 46 2.593026 TGGTTCTCATTGGGTTTCACC 58.407 47.619 0.00 0.00 37.60 4.02
46 47 4.871933 AATGGTTCTCATTGGGTTTCAC 57.128 40.909 0.00 0.00 43.85 3.18
47 48 6.553100 AGTTAAATGGTTCTCATTGGGTTTCA 59.447 34.615 0.00 0.00 44.68 2.69
48 49 6.993079 AGTTAAATGGTTCTCATTGGGTTTC 58.007 36.000 0.00 0.00 44.68 2.78
49 50 6.014584 GGAGTTAAATGGTTCTCATTGGGTTT 60.015 38.462 0.00 0.00 44.68 3.27
50 51 5.480422 GGAGTTAAATGGTTCTCATTGGGTT 59.520 40.000 0.00 0.00 44.68 4.11
51 52 5.016831 GGAGTTAAATGGTTCTCATTGGGT 58.983 41.667 0.00 0.00 44.68 4.51
52 53 5.016173 TGGAGTTAAATGGTTCTCATTGGG 58.984 41.667 0.00 0.00 44.68 4.12
53 54 6.377996 TGATGGAGTTAAATGGTTCTCATTGG 59.622 38.462 0.00 0.00 44.68 3.16
54 55 7.395190 TGATGGAGTTAAATGGTTCTCATTG 57.605 36.000 0.00 0.00 44.68 2.82
56 57 6.947733 TGTTGATGGAGTTAAATGGTTCTCAT 59.052 34.615 0.00 0.00 37.79 2.90
57 58 6.303054 TGTTGATGGAGTTAAATGGTTCTCA 58.697 36.000 0.00 0.00 0.00 3.27
58 59 6.655003 TCTGTTGATGGAGTTAAATGGTTCTC 59.345 38.462 0.00 0.00 0.00 2.87
59 60 6.542821 TCTGTTGATGGAGTTAAATGGTTCT 58.457 36.000 0.00 0.00 0.00 3.01
60 61 6.623767 GCTCTGTTGATGGAGTTAAATGGTTC 60.624 42.308 0.00 0.00 32.67 3.62
61 62 5.183904 GCTCTGTTGATGGAGTTAAATGGTT 59.816 40.000 0.00 0.00 32.67 3.67
62 63 4.702131 GCTCTGTTGATGGAGTTAAATGGT 59.298 41.667 0.00 0.00 32.67 3.55
63 64 4.701651 TGCTCTGTTGATGGAGTTAAATGG 59.298 41.667 0.00 0.00 32.67 3.16
64 65 5.885230 TGCTCTGTTGATGGAGTTAAATG 57.115 39.130 0.00 0.00 32.67 2.32
65 66 5.105997 GCTTGCTCTGTTGATGGAGTTAAAT 60.106 40.000 0.00 0.00 32.67 1.40
66 67 4.216257 GCTTGCTCTGTTGATGGAGTTAAA 59.784 41.667 0.00 0.00 32.67 1.52
67 68 3.753272 GCTTGCTCTGTTGATGGAGTTAA 59.247 43.478 0.00 0.00 32.67 2.01
68 69 3.244526 TGCTTGCTCTGTTGATGGAGTTA 60.245 43.478 0.00 0.00 32.67 2.24
69 70 2.157738 GCTTGCTCTGTTGATGGAGTT 58.842 47.619 0.00 0.00 32.67 3.01
70 71 1.072806 TGCTTGCTCTGTTGATGGAGT 59.927 47.619 0.00 0.00 32.67 3.85
71 72 1.817357 TGCTTGCTCTGTTGATGGAG 58.183 50.000 0.00 0.00 0.00 3.86
87 88 6.661304 AAGGAAACTCAAGAATGAAATGCT 57.339 33.333 0.00 0.00 42.68 3.79
89 90 7.170320 CCACAAAGGAAACTCAAGAATGAAATG 59.830 37.037 0.00 0.00 42.68 2.32
90 91 7.069826 TCCACAAAGGAAACTCAAGAATGAAAT 59.930 33.333 0.00 0.00 45.65 2.17
111 112 7.403312 TCAAAGAAGAAAAAGTGATTCCACA 57.597 32.000 0.00 0.00 45.54 4.17
115 116 9.305925 ACACAATCAAAGAAGAAAAAGTGATTC 57.694 29.630 0.00 0.00 34.37 2.52
147 149 0.620700 AGAGTAAAGCCCCCGTCCAT 60.621 55.000 0.00 0.00 0.00 3.41
148 150 1.229400 AGAGTAAAGCCCCCGTCCA 60.229 57.895 0.00 0.00 0.00 4.02
149 151 0.976590 AGAGAGTAAAGCCCCCGTCC 60.977 60.000 0.00 0.00 0.00 4.79
150 152 0.175989 CAGAGAGTAAAGCCCCCGTC 59.824 60.000 0.00 0.00 0.00 4.79
151 153 0.252103 TCAGAGAGTAAAGCCCCCGT 60.252 55.000 0.00 0.00 0.00 5.28
152 154 0.902531 TTCAGAGAGTAAAGCCCCCG 59.097 55.000 0.00 0.00 0.00 5.73
172 174 6.480085 GCAATGTTGTGCAGGCAAATATGC 62.480 45.833 0.00 0.00 46.83 3.14
237 239 5.588958 AGATGTGAGATCGATGTTTCTCA 57.411 39.130 11.50 11.50 44.55 3.27
238 240 6.141527 CGTTAGATGTGAGATCGATGTTTCTC 59.858 42.308 0.54 4.53 39.07 2.87
239 241 5.974158 CGTTAGATGTGAGATCGATGTTTCT 59.026 40.000 0.54 3.30 0.00 2.52
240 242 5.174035 CCGTTAGATGTGAGATCGATGTTTC 59.826 44.000 0.54 0.00 0.00 2.78
241 243 5.043903 CCGTTAGATGTGAGATCGATGTTT 58.956 41.667 0.54 0.00 0.00 2.83
242 244 4.499865 CCCGTTAGATGTGAGATCGATGTT 60.500 45.833 0.54 0.00 0.00 2.71
243 245 3.004839 CCCGTTAGATGTGAGATCGATGT 59.995 47.826 0.54 0.00 0.00 3.06
259 261 7.350744 TGCATAGTTAGAAATCTACCCGTTA 57.649 36.000 0.00 0.00 0.00 3.18
282 284 1.552337 ACTACAGGCTCCACACTGATG 59.448 52.381 0.00 0.00 38.09 3.07
369 372 4.523943 AGCATGTGATTTGGTGCTTTTAGA 59.476 37.500 0.00 0.00 44.92 2.10
379 382 4.445452 AGCTAACAAGCATGTGATTTGG 57.555 40.909 0.00 0.00 40.46 3.28
439 445 6.596497 ACAACGTACCCATCTTAATAAACAGG 59.404 38.462 0.00 0.00 0.00 4.00
445 451 6.594937 GGTTGAACAACGTACCCATCTTAATA 59.405 38.462 10.81 0.00 42.02 0.98
469 495 5.340803 CAAAGCATGTGATTCTCTGAATGG 58.659 41.667 0.00 0.00 0.00 3.16
476 502 3.944015 AGTAGGCAAAGCATGTGATTCTC 59.056 43.478 0.00 0.00 0.00 2.87
528 554 3.055891 TGTGAATGAGTCATGGTCATCGT 60.056 43.478 6.34 0.00 38.90 3.73
555 581 8.924303 AGGCTCAAGTGTAGTGAATATATAACA 58.076 33.333 0.00 0.00 0.00 2.41
561 587 7.425224 ACTAAGGCTCAAGTGTAGTGAATAT 57.575 36.000 1.96 0.00 0.00 1.28
562 588 6.852420 ACTAAGGCTCAAGTGTAGTGAATA 57.148 37.500 1.96 0.00 0.00 1.75
640 666 6.135454 ACTTTGGATATTGGGCATATCAACA 58.865 36.000 7.03 0.00 44.19 3.33
641 667 6.294731 GGACTTTGGATATTGGGCATATCAAC 60.295 42.308 7.03 0.00 44.19 3.18
642 668 5.774690 GGACTTTGGATATTGGGCATATCAA 59.225 40.000 7.03 0.00 44.19 2.57
656 751 0.921256 CCTCCCAGGGGACTTTGGAT 60.921 60.000 5.33 0.00 40.21 3.41
674 770 2.743928 CTGTGAGACAAGGCGGCC 60.744 66.667 12.11 12.11 0.00 6.13
675 771 3.426568 GCTGTGAGACAAGGCGGC 61.427 66.667 0.00 0.00 0.00 6.53
676 772 1.572085 CTTGCTGTGAGACAAGGCGG 61.572 60.000 0.00 0.00 39.67 6.13
740 836 1.198713 GACTGCAGAGAAGGGGATCA 58.801 55.000 23.35 0.00 0.00 2.92
808 904 2.109126 GCGTGATGCCTTCTCCACC 61.109 63.158 0.00 0.00 37.76 4.61
891 987 0.403271 AAGGCCAGTTCAGCTCACAT 59.597 50.000 5.01 0.00 0.00 3.21
893 989 0.036022 AGAAGGCCAGTTCAGCTCAC 59.964 55.000 5.01 0.00 0.00 3.51
897 993 0.036022 AGTGAGAAGGCCAGTTCAGC 59.964 55.000 5.01 0.00 0.00 4.26
910 1006 3.071023 AGGGACGAAAACAATGAGTGAGA 59.929 43.478 0.00 0.00 0.00 3.27
932 1036 0.105964 ACACTAGCAAACGACCTGCA 59.894 50.000 9.97 0.00 42.48 4.41
939 1043 2.592897 CAGCTACGTACACTAGCAAACG 59.407 50.000 17.62 9.12 39.36 3.60
983 1087 3.058639 CACTCTAACAGCAAGCAGGTTTC 60.059 47.826 7.29 0.00 0.00 2.78
1053 1345 1.070758 TGGTCTCCTCAACAGCAAGAC 59.929 52.381 0.00 0.00 36.47 3.01
1064 1356 3.190874 CGCATAAGAAACTGGTCTCCTC 58.809 50.000 0.00 0.00 0.00 3.71
1334 1626 5.146010 TCAACACCAATTTTATGAAGGGC 57.854 39.130 0.00 0.00 0.00 5.19
1423 1715 5.068636 GCATCATCCACAACCTGATTATCT 58.931 41.667 0.00 0.00 0.00 1.98
1432 1727 3.266510 TCTACAGCATCATCCACAACC 57.733 47.619 0.00 0.00 0.00 3.77
1445 1746 4.904241 AGGCCATCATAATCTTCTACAGC 58.096 43.478 5.01 0.00 0.00 4.40
1459 1760 0.752743 GCTGGTGCATAAGGCCATCA 60.753 55.000 5.01 0.00 43.89 3.07
1460 1761 0.752743 TGCTGGTGCATAAGGCCATC 60.753 55.000 5.01 0.00 45.31 3.51
1461 1762 1.307309 TGCTGGTGCATAAGGCCAT 59.693 52.632 5.01 0.00 45.31 4.40
1525 1826 9.067986 CCCTCAACTAATTTATCCACTATTTCC 57.932 37.037 0.00 0.00 0.00 3.13
1675 1976 4.245660 TGACCTTGAGCTTTTGAGATACG 58.754 43.478 0.00 0.00 0.00 3.06
1710 2011 7.116805 CACTCAGTATTTGCTTCAAAATTTCCC 59.883 37.037 0.00 0.00 36.90 3.97
1739 2041 7.389053 GTCATCAATTTTTGTAGACTGGTCTCT 59.611 37.037 6.52 0.00 40.93 3.10
1808 2110 8.541133 AGAACTAGCAAGTATCTTTTCTTGAC 57.459 34.615 8.74 1.61 42.22 3.18
1903 2205 6.373774 TGGTTAGCAGTACTCTACTACAGTTC 59.626 42.308 0.00 0.00 37.23 3.01
1988 2290 5.048013 CCCAACTTTTCTGTGGATCTAAACC 60.048 44.000 0.00 0.00 0.00 3.27
1997 2299 6.405278 AAATAGTTCCCAACTTTTCTGTGG 57.595 37.500 0.00 0.00 42.81 4.17
1998 2300 8.166422 ACTAAATAGTTCCCAACTTTTCTGTG 57.834 34.615 0.00 0.00 42.81 3.66
2157 2459 1.388547 TGCTTGTGTGTTGAGGTTCC 58.611 50.000 0.00 0.00 0.00 3.62
2239 2541 0.679505 AGTCCTTGTAACTGCGAGCA 59.320 50.000 0.00 0.00 0.00 4.26
2273 2575 9.790344 AGCAATATAGAGCAAACAAGATCTTAT 57.210 29.630 7.86 0.00 35.58 1.73
2338 2640 7.493743 GCCATCTGCTATCCATAGATTAATG 57.506 40.000 0.00 0.00 36.87 1.90
2359 2661 2.308570 AGGTGTATGTGGAATGAAGCCA 59.691 45.455 0.00 0.00 0.00 4.75
2432 2734 2.193306 ACAACTTGCACAAAGCTTCG 57.807 45.000 0.00 0.00 45.94 3.79
2531 2833 0.881118 TCAAGGAAACCATCTTGCGC 59.119 50.000 0.00 0.00 39.92 6.09
2642 3077 2.287009 GCTAAAAGCCTCACACACACAC 60.287 50.000 0.00 0.00 34.48 3.82
2653 3745 8.043710 GTCCATATATATGTCAGCTAAAAGCCT 58.956 37.037 19.11 0.00 35.36 4.58
2661 3753 9.706529 TCATTAGAGTCCATATATATGTCAGCT 57.293 33.333 19.11 13.46 31.82 4.24
2728 3821 8.289618 TGTTTTGGAAAGAAGAACGATAGAATG 58.710 33.333 0.00 0.00 41.38 2.67
2754 3847 2.159043 CGTGTAAGATCTGCCCACTCAT 60.159 50.000 14.26 0.00 0.00 2.90
2786 3879 4.110482 CAAAGCCAAATAATGCTCTGAGC 58.890 43.478 22.38 22.38 42.82 4.26
2798 3891 5.246656 TGATGATGAAAGTCCAAAGCCAAAT 59.753 36.000 0.00 0.00 0.00 2.32
2824 3920 9.015367 GCTCAGGTAAAGATACTGATACTGATA 57.985 37.037 0.00 0.00 30.25 2.15
2825 3921 7.728083 AGCTCAGGTAAAGATACTGATACTGAT 59.272 37.037 0.00 0.00 30.25 2.90
2826 3922 7.063593 AGCTCAGGTAAAGATACTGATACTGA 58.936 38.462 0.00 0.00 32.36 3.41
2827 3923 7.283625 AGCTCAGGTAAAGATACTGATACTG 57.716 40.000 0.00 0.00 32.36 2.74
2828 3924 8.998277 TTAGCTCAGGTAAAGATACTGATACT 57.002 34.615 0.00 0.00 32.36 2.12
2829 3925 8.301002 CCTTAGCTCAGGTAAAGATACTGATAC 58.699 40.741 5.73 0.00 32.36 2.24
2864 3960 2.917971 CGAGTTCTCGACATGAAGAACC 59.082 50.000 23.86 17.95 40.87 3.62
2912 4008 3.684788 GTCGTAGGTGAATGCACAAATCT 59.315 43.478 6.08 0.00 46.96 2.40
2914 4010 3.188460 GTGTCGTAGGTGAATGCACAAAT 59.812 43.478 6.08 0.00 46.96 2.32
2916 4012 2.139917 GTGTCGTAGGTGAATGCACAA 58.860 47.619 6.08 0.00 46.96 3.33
2917 4013 1.790755 GTGTCGTAGGTGAATGCACA 58.209 50.000 6.08 0.00 46.96 4.57
2950 4046 4.028131 AGGAACCATCGTGTATCCAAGTA 58.972 43.478 0.00 0.00 32.47 2.24
2953 4049 3.517901 AGAAGGAACCATCGTGTATCCAA 59.482 43.478 0.00 0.00 32.47 3.53
2958 4054 5.655090 TGATAGAAGAAGGAACCATCGTGTA 59.345 40.000 0.00 0.00 0.00 2.90
2962 4058 4.342378 TCCTGATAGAAGAAGGAACCATCG 59.658 45.833 0.00 0.00 37.16 3.84
3008 4104 4.453136 ACATACAAACAACGTGGTACATCC 59.547 41.667 0.00 0.00 44.52 3.51
3022 4133 4.795970 CGGGAGCTTGATACATACAAAC 57.204 45.455 0.00 0.00 0.00 2.93
3090 4201 0.465460 ACACGCTTTGGCAGAGGAAA 60.465 50.000 7.20 0.00 38.60 3.13
3093 4204 2.328099 GGACACGCTTTGGCAGAGG 61.328 63.158 7.20 0.00 32.99 3.69
3103 4214 3.263941 GCGGAATTTGGACACGCT 58.736 55.556 0.00 0.00 46.02 5.07
3110 4221 2.939103 CTCTAGGTTCTGCGGAATTTGG 59.061 50.000 11.97 5.23 33.71 3.28
3119 4230 2.167487 ACTAAGCTGCTCTAGGTTCTGC 59.833 50.000 1.00 0.00 43.30 4.26
3122 4233 5.285651 CACATACTAAGCTGCTCTAGGTTC 58.714 45.833 1.00 0.00 43.30 3.62
3129 4240 1.139853 AGCCCACATACTAAGCTGCTC 59.860 52.381 1.00 0.00 31.23 4.26
3138 4249 1.206878 TCATCAGCAGCCCACATACT 58.793 50.000 0.00 0.00 0.00 2.12
3272 4383 4.878397 CCCTCAAGTATTAACTCTTGCAGG 59.122 45.833 19.03 19.03 40.27 4.85
3305 4416 1.270839 ACCTCCATCGTCCACTTGTTG 60.271 52.381 0.00 0.00 0.00 3.33
3441 4570 5.735324 CGTGCTGTCATTAGAATGATCTTG 58.265 41.667 8.14 1.70 46.17 3.02
3452 4581 1.655484 CATCCAGCGTGCTGTCATTA 58.345 50.000 19.58 1.58 42.15 1.90
3606 4751 4.749976 AGTAGCATTCTTCTCTTCCGAAC 58.250 43.478 0.00 0.00 0.00 3.95
3609 4754 5.277825 CACTAGTAGCATTCTTCTCTTCCG 58.722 45.833 0.00 0.00 0.00 4.30
3612 4757 4.714308 AGGCACTAGTAGCATTCTTCTCTT 59.286 41.667 15.90 0.00 36.02 2.85
3613 4758 4.285863 AGGCACTAGTAGCATTCTTCTCT 58.714 43.478 15.90 2.70 36.02 3.10
3614 4759 4.664150 AGGCACTAGTAGCATTCTTCTC 57.336 45.455 15.90 0.91 36.02 2.87
3615 4760 5.428184 AAAGGCACTAGTAGCATTCTTCT 57.572 39.130 14.46 3.09 38.49 2.85
3616 4761 5.877564 AGAAAAGGCACTAGTAGCATTCTTC 59.122 40.000 14.46 16.62 38.49 2.87
3617 4762 5.645497 CAGAAAAGGCACTAGTAGCATTCTT 59.355 40.000 14.46 11.59 38.49 2.52
3618 4763 5.181748 CAGAAAAGGCACTAGTAGCATTCT 58.818 41.667 14.46 15.80 38.49 2.40
3619 4764 4.938226 ACAGAAAAGGCACTAGTAGCATTC 59.062 41.667 14.46 14.46 38.49 2.67
3623 4768 6.237861 CGAATAACAGAAAAGGCACTAGTAGC 60.238 42.308 0.00 1.67 38.49 3.58
3624 4769 7.033791 TCGAATAACAGAAAAGGCACTAGTAG 58.966 38.462 0.00 0.00 38.49 2.57
3625 4770 6.927416 TCGAATAACAGAAAAGGCACTAGTA 58.073 36.000 0.00 0.00 38.49 1.82
3626 4771 5.790593 TCGAATAACAGAAAAGGCACTAGT 58.209 37.500 0.00 0.00 38.49 2.57
3627 4772 6.910536 ATCGAATAACAGAAAAGGCACTAG 57.089 37.500 0.00 0.00 38.49 2.57
3628 4773 8.958119 AATATCGAATAACAGAAAAGGCACTA 57.042 30.769 0.00 0.00 38.49 2.74
3630 4775 7.920738 AGAATATCGAATAACAGAAAAGGCAC 58.079 34.615 0.00 0.00 0.00 5.01
3631 4776 7.226720 GGAGAATATCGAATAACAGAAAAGGCA 59.773 37.037 0.00 0.00 0.00 4.75
3632 4777 7.308049 GGGAGAATATCGAATAACAGAAAAGGC 60.308 40.741 0.00 0.00 0.00 4.35
3633 4778 7.934120 AGGGAGAATATCGAATAACAGAAAAGG 59.066 37.037 0.00 0.00 0.00 3.11
3634 4779 8.768955 CAGGGAGAATATCGAATAACAGAAAAG 58.231 37.037 0.00 0.00 0.00 2.27
3635 4780 7.226720 GCAGGGAGAATATCGAATAACAGAAAA 59.773 37.037 0.00 0.00 0.00 2.29
3636 4781 6.706270 GCAGGGAGAATATCGAATAACAGAAA 59.294 38.462 0.00 0.00 0.00 2.52
3637 4782 6.223852 GCAGGGAGAATATCGAATAACAGAA 58.776 40.000 0.00 0.00 0.00 3.02
3639 4784 4.932200 GGCAGGGAGAATATCGAATAACAG 59.068 45.833 0.00 0.00 0.00 3.16
3640 4785 4.560716 CGGCAGGGAGAATATCGAATAACA 60.561 45.833 0.00 0.00 0.00 2.41
3641 4786 3.927142 CGGCAGGGAGAATATCGAATAAC 59.073 47.826 0.00 0.00 0.00 1.89
3642 4787 3.056107 CCGGCAGGGAGAATATCGAATAA 60.056 47.826 0.00 0.00 38.47 1.40
3643 4788 2.496070 CCGGCAGGGAGAATATCGAATA 59.504 50.000 0.00 0.00 38.47 1.75
3645 4790 0.679505 CCGGCAGGGAGAATATCGAA 59.320 55.000 0.00 0.00 38.47 3.71
3659 4804 2.888594 CGTTATTCTTCTTCTCCGGCA 58.111 47.619 0.00 0.00 0.00 5.69
3677 4822 3.611766 ATGCCTTTCAACTAGTAGCGT 57.388 42.857 0.00 0.00 0.00 5.07
3678 4823 4.946784 AAATGCCTTTCAACTAGTAGCG 57.053 40.909 0.00 0.00 0.00 4.26
3679 4824 6.318900 ACCATAAATGCCTTTCAACTAGTAGC 59.681 38.462 0.00 0.00 0.00 3.58
3691 4836 4.463891 CACTGAAAGGACCATAAATGCCTT 59.536 41.667 0.00 0.00 42.27 4.35
3693 4838 3.763897 ACACTGAAAGGACCATAAATGCC 59.236 43.478 0.00 0.00 39.30 4.40
3695 4840 5.447279 GCGTACACTGAAAGGACCATAAATG 60.447 44.000 0.00 0.00 39.30 2.32
3696 4841 4.634443 GCGTACACTGAAAGGACCATAAAT 59.366 41.667 0.00 0.00 39.30 1.40
3697 4842 3.998341 GCGTACACTGAAAGGACCATAAA 59.002 43.478 0.00 0.00 39.30 1.40
3713 4914 2.340809 CAGGAACACGGGCGTACA 59.659 61.111 0.00 0.00 0.00 2.90
3780 5028 8.041323 CCAATACAGGAATAGTACAGACACTTT 58.959 37.037 0.00 0.00 0.00 2.66
3781 5029 7.364762 CCCAATACAGGAATAGTACAGACACTT 60.365 40.741 0.00 0.00 0.00 3.16
3782 5030 6.098409 CCCAATACAGGAATAGTACAGACACT 59.902 42.308 0.00 0.00 0.00 3.55
3783 5031 6.097839 TCCCAATACAGGAATAGTACAGACAC 59.902 42.308 0.00 0.00 0.00 3.67
3822 5070 5.681639 AGTGATTGCTCAATGATCTGATGA 58.318 37.500 0.00 0.00 31.85 2.92
3824 5072 5.531659 GGAAGTGATTGCTCAATGATCTGAT 59.468 40.000 0.00 0.00 31.85 2.90
3825 5073 4.880120 GGAAGTGATTGCTCAATGATCTGA 59.120 41.667 0.00 0.00 31.85 3.27
3828 5076 3.547613 GCGGAAGTGATTGCTCAATGATC 60.548 47.826 0.00 0.00 31.85 2.92
3829 5077 2.357009 GCGGAAGTGATTGCTCAATGAT 59.643 45.455 0.00 0.00 31.85 2.45
3831 5079 1.469703 TGCGGAAGTGATTGCTCAATG 59.530 47.619 0.00 0.00 31.85 2.82
3832 5080 1.825090 TGCGGAAGTGATTGCTCAAT 58.175 45.000 0.00 0.00 31.85 2.57
3891 5196 4.109766 CGACGCCTCACTTGATACAATAA 58.890 43.478 0.00 0.00 0.00 1.40
3939 5332 2.610232 GGCACCGAAATTGCTGTCATTT 60.610 45.455 0.00 0.00 40.07 2.32
4006 5401 4.349048 AGGATGCATCTATTAGCACAAGGA 59.651 41.667 25.28 0.00 44.49 3.36
4036 5454 9.387257 TCTATATTCACTCTCGTAACAGTTACA 57.613 33.333 20.99 9.12 35.89 2.41
4058 5476 9.053472 ACCTGCTACTAGTAGTGATCTATCTAT 57.947 37.037 26.76 2.82 35.65 1.98
4059 5477 8.438618 ACCTGCTACTAGTAGTGATCTATCTA 57.561 38.462 26.76 4.78 35.65 1.98
4060 5478 7.016760 TGACCTGCTACTAGTAGTGATCTATCT 59.983 40.741 26.76 4.70 35.65 1.98
4061 5479 7.162761 TGACCTGCTACTAGTAGTGATCTATC 58.837 42.308 26.76 16.64 35.65 2.08
4089 5507 4.610605 TTCGGATTTTGGTGTCTCTGTA 57.389 40.909 0.00 0.00 0.00 2.74
4092 5510 3.264450 AGGATTCGGATTTTGGTGTCTCT 59.736 43.478 0.00 0.00 0.00 3.10
4109 5527 3.327757 TGCAGTAACAGAGGTTCAGGATT 59.672 43.478 0.00 0.00 38.45 3.01
4185 6690 4.154015 TGCTTCAGATTGTTTACCACATCG 59.846 41.667 0.00 0.00 34.43 3.84
4210 6715 0.939577 TTGCGAGTCGTGACAGAAGC 60.940 55.000 15.08 2.98 0.00 3.86
4214 6719 1.880601 GCTGTTGCGAGTCGTGACAG 61.881 60.000 29.69 29.69 41.20 3.51
4266 8832 1.117142 GGCCATGGGGATGGTCAATG 61.117 60.000 15.13 0.00 45.33 2.82
4267 8833 1.233949 GGCCATGGGGATGGTCAAT 59.766 57.895 15.13 0.00 45.33 2.57
4268 8834 2.689175 GGCCATGGGGATGGTCAA 59.311 61.111 15.13 0.00 45.33 3.18
4270 8836 2.517919 GAGGCCATGGGGATGGTC 59.482 66.667 15.13 0.00 46.33 4.02
4271 8837 3.492353 CGAGGCCATGGGGATGGT 61.492 66.667 15.13 0.00 43.53 3.55
4272 8838 3.170672 TCGAGGCCATGGGGATGG 61.171 66.667 15.13 0.00 44.44 3.51
4273 8839 2.111878 GTCGAGGCCATGGGGATG 59.888 66.667 15.13 0.00 35.59 3.51
4274 8840 3.550431 CGTCGAGGCCATGGGGAT 61.550 66.667 15.13 0.00 35.59 3.85
4275 8841 4.770362 TCGTCGAGGCCATGGGGA 62.770 66.667 15.13 0.00 35.59 4.81
4276 8842 4.227134 CTCGTCGAGGCCATGGGG 62.227 72.222 15.13 0.00 37.18 4.96
4277 8843 4.227134 CCTCGTCGAGGCCATGGG 62.227 72.222 27.52 4.13 43.29 4.00
4285 8851 2.182030 GCCTTGGTCCTCGTCGAG 59.818 66.667 15.53 15.53 0.00 4.04
4286 8852 3.379445 GGCCTTGGTCCTCGTCGA 61.379 66.667 0.00 0.00 0.00 4.20
4287 8853 4.796231 CGGCCTTGGTCCTCGTCG 62.796 72.222 0.00 0.00 0.00 5.12
4291 8857 4.785453 CAGGCGGCCTTGGTCCTC 62.785 72.222 21.26 0.00 0.00 3.71
4293 8859 4.660938 AACAGGCGGCCTTGGTCC 62.661 66.667 21.26 0.00 0.00 4.46
4294 8860 2.597510 AAACAGGCGGCCTTGGTC 60.598 61.111 21.26 0.00 0.00 4.02
4295 8861 2.597510 GAAACAGGCGGCCTTGGT 60.598 61.111 21.26 12.88 0.00 3.67
4299 8865 1.600916 GTTCAGAAACAGGCGGCCT 60.601 57.895 17.69 17.69 35.36 5.19
4304 8870 2.303311 AGGGAGTAGTTCAGAAACAGGC 59.697 50.000 0.00 0.00 37.88 4.85
4310 8876 3.432378 GGACAGAGGGAGTAGTTCAGAA 58.568 50.000 0.00 0.00 0.00 3.02
4323 8889 0.545309 TTGGGACAGAGGGACAGAGG 60.545 60.000 0.00 0.00 42.39 3.69
4325 8891 1.814429 TTTTGGGACAGAGGGACAGA 58.186 50.000 0.00 0.00 42.39 3.41
4326 8892 2.887151 ATTTTGGGACAGAGGGACAG 57.113 50.000 0.00 0.00 42.39 3.51
4328 8894 6.248569 TCTTATATTTTGGGACAGAGGGAC 57.751 41.667 0.00 0.00 42.39 4.46
4329 8895 6.353602 GGTTCTTATATTTTGGGACAGAGGGA 60.354 42.308 0.00 0.00 42.39 4.20
4331 8897 6.663734 AGGTTCTTATATTTTGGGACAGAGG 58.336 40.000 0.00 0.00 42.39 3.69
4332 8898 9.110502 GTTAGGTTCTTATATTTTGGGACAGAG 57.889 37.037 0.00 0.00 42.39 3.35
4333 8899 7.767198 CGTTAGGTTCTTATATTTTGGGACAGA 59.233 37.037 0.00 0.00 42.39 3.41
4334 8900 7.551617 ACGTTAGGTTCTTATATTTTGGGACAG 59.448 37.037 0.00 0.00 42.39 3.51
4335 8901 7.396418 ACGTTAGGTTCTTATATTTTGGGACA 58.604 34.615 0.00 0.00 0.00 4.02
4336 8902 7.854557 ACGTTAGGTTCTTATATTTTGGGAC 57.145 36.000 0.00 0.00 0.00 4.46
4351 8917 7.064966 CGTCCCAAAATATAAGAACGTTAGGTT 59.935 37.037 0.00 0.00 42.96 3.50
4352 8918 6.536224 CGTCCCAAAATATAAGAACGTTAGGT 59.464 38.462 0.00 0.00 0.00 3.08
4353 8919 6.018507 CCGTCCCAAAATATAAGAACGTTAGG 60.019 42.308 0.00 0.00 0.00 2.69
4354 8920 6.757947 TCCGTCCCAAAATATAAGAACGTTAG 59.242 38.462 0.00 0.00 0.00 2.34
4355 8921 6.638610 TCCGTCCCAAAATATAAGAACGTTA 58.361 36.000 0.00 0.00 0.00 3.18
4356 8922 5.490159 TCCGTCCCAAAATATAAGAACGTT 58.510 37.500 0.00 0.00 0.00 3.99
4357 8923 5.088680 TCCGTCCCAAAATATAAGAACGT 57.911 39.130 0.00 0.00 0.00 3.99
4360 8926 4.722781 TCCCTCCGTCCCAAAATATAAGAA 59.277 41.667 0.00 0.00 0.00 2.52
4361 8927 4.300345 TCCCTCCGTCCCAAAATATAAGA 58.700 43.478 0.00 0.00 0.00 2.10
4362 8928 4.102681 ACTCCCTCCGTCCCAAAATATAAG 59.897 45.833 0.00 0.00 0.00 1.73
4363 8929 4.042174 ACTCCCTCCGTCCCAAAATATAA 58.958 43.478 0.00 0.00 0.00 0.98
4364 8930 3.660959 ACTCCCTCCGTCCCAAAATATA 58.339 45.455 0.00 0.00 0.00 0.86
4365 8931 2.488836 ACTCCCTCCGTCCCAAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
4367 8933 1.838077 CTACTCCCTCCGTCCCAAAAT 59.162 52.381 0.00 0.00 0.00 1.82
4370 8936 1.002069 TACTACTCCCTCCGTCCCAA 58.998 55.000 0.00 0.00 0.00 4.12
4372 8938 0.257039 TGTACTACTCCCTCCGTCCC 59.743 60.000 0.00 0.00 0.00 4.46
4373 8939 2.361643 ATGTACTACTCCCTCCGTCC 57.638 55.000 0.00 0.00 0.00 4.79
4374 8940 3.814283 CAGTATGTACTACTCCCTCCGTC 59.186 52.174 0.00 0.00 38.68 4.79
4375 8941 3.818180 CAGTATGTACTACTCCCTCCGT 58.182 50.000 0.00 0.00 38.68 4.69
4376 8942 2.553172 GCAGTATGTACTACTCCCTCCG 59.447 54.545 0.00 0.00 38.68 4.63
4377 8943 3.563223 TGCAGTATGTACTACTCCCTCC 58.437 50.000 0.00 0.00 38.68 4.30
4378 8944 4.276431 GTCTGCAGTATGTACTACTCCCTC 59.724 50.000 14.67 0.00 38.68 4.30
4379 8945 4.208746 GTCTGCAGTATGTACTACTCCCT 58.791 47.826 14.67 0.00 38.68 4.20
4380 8946 3.318557 GGTCTGCAGTATGTACTACTCCC 59.681 52.174 14.67 0.00 38.68 4.30
4382 8948 4.202030 GGTGGTCTGCAGTATGTACTACTC 60.202 50.000 14.67 3.23 38.68 2.59
4383 8949 3.700038 GGTGGTCTGCAGTATGTACTACT 59.300 47.826 14.67 0.00 41.53 2.57
4384 8950 3.700038 AGGTGGTCTGCAGTATGTACTAC 59.300 47.826 14.67 11.67 39.31 2.73
4385 8951 3.699538 CAGGTGGTCTGCAGTATGTACTA 59.300 47.826 14.67 0.00 39.31 1.82
4386 8952 2.497675 CAGGTGGTCTGCAGTATGTACT 59.502 50.000 14.67 3.81 39.31 2.73
4387 8953 2.893637 CAGGTGGTCTGCAGTATGTAC 58.106 52.381 14.67 3.56 39.31 2.90
4416 9060 3.425162 ACTGTTCACCTCCAGGAATTC 57.575 47.619 0.00 0.00 38.94 2.17
4417 9061 3.650942 TGTACTGTTCACCTCCAGGAATT 59.349 43.478 0.00 0.00 38.94 2.17
4418 9062 3.248024 TGTACTGTTCACCTCCAGGAAT 58.752 45.455 0.00 0.00 38.94 3.01
4419 9063 2.684943 TGTACTGTTCACCTCCAGGAA 58.315 47.619 0.00 0.00 38.94 3.36
4420 9064 2.391926 TGTACTGTTCACCTCCAGGA 57.608 50.000 0.00 0.00 38.94 3.86
4421 9065 6.570571 CGATATATGTACTGTTCACCTCCAGG 60.571 46.154 0.00 0.00 42.17 4.45
4435 9079 7.230222 GCAGAAAGCAACATCGATATATGTAC 58.770 38.462 0.00 0.00 44.79 2.90
4469 9115 1.990799 CATGTTTGTCTGCATGGCTG 58.009 50.000 0.00 0.00 38.90 4.85
4477 9123 1.774639 GCACCTTGCATGTTTGTCTG 58.225 50.000 0.00 0.00 44.26 3.51
4507 9153 3.505293 GCCAATAGCAAATCCTGAGGATC 59.495 47.826 15.52 2.23 40.92 3.36
4525 9193 1.290955 GCATCAGCAGCAAAGCCAA 59.709 52.632 0.00 0.00 41.58 4.52
4538 9206 0.179065 CTCGGCAATCTCCTGCATCA 60.179 55.000 0.00 0.00 44.52 3.07
4539 9207 0.179062 ACTCGGCAATCTCCTGCATC 60.179 55.000 0.00 0.00 44.52 3.91
4540 9208 1.123077 TACTCGGCAATCTCCTGCAT 58.877 50.000 0.00 0.00 44.52 3.96
4541 9209 0.901827 TTACTCGGCAATCTCCTGCA 59.098 50.000 0.00 0.00 44.52 4.41
4543 9211 3.126831 GTGATTACTCGGCAATCTCCTG 58.873 50.000 0.00 0.00 34.21 3.86
4544 9212 2.103263 GGTGATTACTCGGCAATCTCCT 59.897 50.000 13.62 0.00 40.48 3.69
4545 9213 2.484889 GGTGATTACTCGGCAATCTCC 58.515 52.381 8.72 8.72 38.29 3.71
4546 9214 2.128035 CGGTGATTACTCGGCAATCTC 58.872 52.381 0.00 3.47 34.21 2.75
4547 9215 1.754803 TCGGTGATTACTCGGCAATCT 59.245 47.619 0.00 0.00 34.21 2.40
4548 9216 2.128035 CTCGGTGATTACTCGGCAATC 58.872 52.381 0.00 0.00 33.78 2.67
4550 9218 1.135199 GTCTCGGTGATTACTCGGCAA 60.135 52.381 0.00 0.00 0.00 4.52
4551 9219 0.454600 GTCTCGGTGATTACTCGGCA 59.545 55.000 0.00 0.00 0.00 5.69
4552 9220 0.591741 CGTCTCGGTGATTACTCGGC 60.592 60.000 0.00 0.00 0.00 5.54
4553 9221 0.029035 CCGTCTCGGTGATTACTCGG 59.971 60.000 0.00 0.00 42.73 4.63
4569 9237 4.825252 GTAACCGCGCCCATCCGT 62.825 66.667 0.00 0.00 0.00 4.69
4570 9238 4.524318 AGTAACCGCGCCCATCCG 62.524 66.667 0.00 0.00 0.00 4.18
4571 9239 2.588034 GAGTAACCGCGCCCATCC 60.588 66.667 0.00 0.00 0.00 3.51
4572 9240 1.883084 CAGAGTAACCGCGCCCATC 60.883 63.158 0.00 0.00 0.00 3.51
4574 9242 4.752879 GCAGAGTAACCGCGCCCA 62.753 66.667 0.00 0.00 0.00 5.36
4575 9243 3.952628 AAGCAGAGTAACCGCGCCC 62.953 63.158 0.00 0.00 0.00 6.13
4576 9244 2.033194 AAAGCAGAGTAACCGCGCC 61.033 57.895 0.00 0.00 0.00 6.53
4577 9245 1.132640 CAAAGCAGAGTAACCGCGC 59.867 57.895 0.00 0.00 0.00 6.86
4578 9246 0.949105 ACCAAAGCAGAGTAACCGCG 60.949 55.000 0.00 0.00 0.00 6.46
4579 9247 0.517316 CACCAAAGCAGAGTAACCGC 59.483 55.000 0.00 0.00 0.00 5.68
4580 9248 1.156736 CCACCAAAGCAGAGTAACCG 58.843 55.000 0.00 0.00 0.00 4.44
4581 9249 1.880027 CACCACCAAAGCAGAGTAACC 59.120 52.381 0.00 0.00 0.00 2.85
4583 9251 1.142870 AGCACCACCAAAGCAGAGTAA 59.857 47.619 0.00 0.00 0.00 2.24
4591 9447 2.126596 TGGCACAGCACCACCAAAG 61.127 57.895 0.00 0.00 30.29 2.77
4599 9455 1.450531 AAAGCAGAGTGGCACAGCAC 61.451 55.000 21.41 6.52 41.80 4.40
4633 9489 7.971183 AAAACAGAGTTTGCAGGTTTAAAAA 57.029 28.000 0.00 0.00 31.94 1.94
4635 9491 7.971722 GTCTAAAACAGAGTTTGCAGGTTTAAA 59.028 33.333 0.00 0.00 32.51 1.52
4636 9492 7.121463 TGTCTAAAACAGAGTTTGCAGGTTTAA 59.879 33.333 0.00 0.00 32.51 1.52
4637 9493 6.600032 TGTCTAAAACAGAGTTTGCAGGTTTA 59.400 34.615 0.00 0.00 32.51 2.01
4638 9494 5.417580 TGTCTAAAACAGAGTTTGCAGGTTT 59.582 36.000 0.00 0.00 32.51 3.27
4639 9495 4.947388 TGTCTAAAACAGAGTTTGCAGGTT 59.053 37.500 0.00 0.00 32.51 3.50
4662 9518 1.003118 TGGTTGGTCAGCTAAATCGCT 59.997 47.619 0.00 0.00 41.90 4.93
4663 9519 1.448985 TGGTTGGTCAGCTAAATCGC 58.551 50.000 0.00 0.00 0.00 4.58
4664 9520 3.074412 AGTTGGTTGGTCAGCTAAATCG 58.926 45.455 0.00 0.00 0.00 3.34
4665 9521 6.569179 TTAAGTTGGTTGGTCAGCTAAATC 57.431 37.500 0.00 0.00 0.00 2.17
4668 9524 7.308951 GCTTTATTAAGTTGGTTGGTCAGCTAA 60.309 37.037 0.00 0.00 33.74 3.09
4679 9535 3.086282 CGGTGGGCTTTATTAAGTTGGT 58.914 45.455 0.00 0.00 33.74 3.67
4708 9564 5.784750 TCTCGTCATGCTATGTTTTCTTG 57.215 39.130 0.00 0.00 0.00 3.02
4718 9574 7.710475 TGATAACAATGATTTCTCGTCATGCTA 59.290 33.333 0.00 0.00 36.49 3.49
4719 9575 6.539826 TGATAACAATGATTTCTCGTCATGCT 59.460 34.615 0.00 0.00 36.49 3.79
4721 9577 7.913423 ACTGATAACAATGATTTCTCGTCATG 58.087 34.615 0.00 0.00 36.49 3.07
4730 9586 5.220472 CGCACTCGACTGATAACAATGATTT 60.220 40.000 0.00 0.00 38.10 2.17
4731 9587 4.268644 CGCACTCGACTGATAACAATGATT 59.731 41.667 0.00 0.00 38.10 2.57
4732 9588 3.798878 CGCACTCGACTGATAACAATGAT 59.201 43.478 0.00 0.00 38.10 2.45
4734 9590 3.179048 TCGCACTCGACTGATAACAATG 58.821 45.455 0.00 0.00 40.21 2.82
4751 9696 0.798159 GTCTGTGCAATGTGATCGCA 59.202 50.000 12.12 12.12 0.00 5.10
4754 9699 4.494350 AACTTGTCTGTGCAATGTGATC 57.506 40.909 0.00 0.00 0.00 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.