Multiple sequence alignment - TraesCS6B01G444200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G444200 chr6B 100.000 3554 0 0 1 3554 706972549 706976102 0.000000e+00 6564
1 TraesCS6B01G444200 chr6B 81.311 2745 433 55 1 2694 707007440 707010155 0.000000e+00 2154
2 TraesCS6B01G444200 chr6B 81.616 1572 227 30 1005 2566 707225365 707223846 0.000000e+00 1245
3 TraesCS6B01G444200 chr6B 76.375 927 171 31 413 1300 707197678 707196761 4.180000e-124 455
4 TraesCS6B01G444200 chr6B 81.301 369 65 4 426 793 707225978 707225613 2.680000e-76 296
5 TraesCS6B01G444200 chr6B 92.553 188 14 0 3367 3554 623367314 623367127 1.630000e-68 270
6 TraesCS6B01G444200 chr6D 83.227 2659 383 47 81 2694 463756920 463754280 0.000000e+00 2381
7 TraesCS6B01G444200 chr6D 78.543 2293 389 63 434 2682 463863334 463865567 0.000000e+00 1413
8 TraesCS6B01G444200 chr6D 84.507 1207 169 15 1450 2647 469604649 469605846 0.000000e+00 1177
9 TraesCS6B01G444200 chr6D 74.830 294 57 12 918 1195 469604072 469604364 2.240000e-22 117
10 TraesCS6B01G444200 chr6A 81.881 2903 424 63 81 2912 610268168 610271039 0.000000e+00 2353
11 TraesCS6B01G444200 chr6A 79.224 2166 373 53 420 2557 610274296 610276412 0.000000e+00 1435
12 TraesCS6B01G444200 chr6A 91.534 189 12 4 3367 3553 556672508 556672322 1.270000e-64 257
13 TraesCS6B01G444200 chr6A 88.780 205 19 3 3350 3554 613110968 613111168 7.620000e-62 248
14 TraesCS6B01G444200 chrUn 82.513 2276 334 38 420 2654 253311435 253313687 0.000000e+00 1940
15 TraesCS6B01G444200 chrUn 91.444 187 16 0 3368 3554 32173322 32173508 1.270000e-64 257
16 TraesCS6B01G444200 chrUn 90.957 188 17 0 3367 3554 377022120 377021933 1.640000e-63 254
17 TraesCS6B01G444200 chr2B 77.555 2290 425 57 420 2635 402558015 402555741 0.000000e+00 1299
18 TraesCS6B01G444200 chr2D 78.386 1698 317 27 902 2556 334265528 334263838 0.000000e+00 1057
19 TraesCS6B01G444200 chr2D 93.085 188 13 0 3367 3554 423310987 423310800 3.490000e-70 276
20 TraesCS6B01G444200 chr1A 78.178 1471 287 25 1010 2463 9128561 9127108 0.000000e+00 907
21 TraesCS6B01G444200 chr1A 90.256 195 18 1 3361 3554 511243213 511243019 1.640000e-63 254
22 TraesCS6B01G444200 chr1A 79.114 316 60 6 420 732 9149514 9149202 2.780000e-51 213
23 TraesCS6B01G444200 chr2A 75.296 1352 272 36 420 1723 445034502 445033165 1.100000e-164 590
24 TraesCS6B01G444200 chr7A 91.489 188 16 0 3367 3554 33424853 33424666 3.520000e-65 259
25 TraesCS6B01G444200 chr5B 91.099 191 17 0 3364 3554 251344605 251344795 3.520000e-65 259
26 TraesCS6B01G444200 chr5B 75.806 372 80 10 428 794 641713898 641714264 2.820000e-41 180
27 TraesCS6B01G444200 chr5A 77.154 267 51 10 426 687 638816992 638817253 2.860000e-31 147


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G444200 chr6B 706972549 706976102 3553 False 6564.0 6564 100.0000 1 3554 1 chr6B.!!$F1 3553
1 TraesCS6B01G444200 chr6B 707007440 707010155 2715 False 2154.0 2154 81.3110 1 2694 1 chr6B.!!$F2 2693
2 TraesCS6B01G444200 chr6B 707223846 707225978 2132 True 770.5 1245 81.4585 426 2566 2 chr6B.!!$R3 2140
3 TraesCS6B01G444200 chr6B 707196761 707197678 917 True 455.0 455 76.3750 413 1300 1 chr6B.!!$R2 887
4 TraesCS6B01G444200 chr6D 463754280 463756920 2640 True 2381.0 2381 83.2270 81 2694 1 chr6D.!!$R1 2613
5 TraesCS6B01G444200 chr6D 463863334 463865567 2233 False 1413.0 1413 78.5430 434 2682 1 chr6D.!!$F1 2248
6 TraesCS6B01G444200 chr6D 469604072 469605846 1774 False 647.0 1177 79.6685 918 2647 2 chr6D.!!$F2 1729
7 TraesCS6B01G444200 chr6A 610268168 610276412 8244 False 1894.0 2353 80.5525 81 2912 2 chr6A.!!$F2 2831
8 TraesCS6B01G444200 chrUn 253311435 253313687 2252 False 1940.0 1940 82.5130 420 2654 1 chrUn.!!$F2 2234
9 TraesCS6B01G444200 chr2B 402555741 402558015 2274 True 1299.0 1299 77.5550 420 2635 1 chr2B.!!$R1 2215
10 TraesCS6B01G444200 chr2D 334263838 334265528 1690 True 1057.0 1057 78.3860 902 2556 1 chr2D.!!$R1 1654
11 TraesCS6B01G444200 chr1A 9127108 9128561 1453 True 907.0 907 78.1780 1010 2463 1 chr1A.!!$R1 1453
12 TraesCS6B01G444200 chr2A 445033165 445034502 1337 True 590.0 590 75.2960 420 1723 1 chr2A.!!$R1 1303

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
124 133 0.036306 TGCCGTCCTTTTCTTCCTCC 59.964 55.0 0.00 0.0 0.0 4.30 F
397 412 0.110688 CGACACAACCGCTCACATTG 60.111 55.0 0.00 0.0 0.0 2.82 F
398 413 0.385974 GACACAACCGCTCACATTGC 60.386 55.0 0.00 0.0 0.0 3.56 F
663 687 0.480690 ACACATTGGTACCTGGGCAA 59.519 50.0 14.36 0.0 0.0 4.52 F
872 927 0.808847 GGCCTCGTCGTTTATGGGTC 60.809 60.0 0.00 0.0 0.0 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1029 1138 1.299468 GCCATACTCTCCGCAGACG 60.299 63.158 0.0 0.0 39.67 4.18 R
1301 1431 2.012673 CCAACTGGTCATAGCTGAAGC 58.987 52.381 0.0 0.0 42.49 3.86 R
1625 1809 2.029838 ACCGAATCCTTCAGTGCATC 57.970 50.000 0.0 0.0 0.00 3.91 R
2341 2526 2.525368 TCGAATCACTTCCTCCTGACA 58.475 47.619 0.0 0.0 0.00 3.58 R
2752 2994 1.757118 CTTCCTTCGGACCATCTGCTA 59.243 52.381 0.0 0.0 0.00 3.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.521130 TGATGTTTGCTTCGACTACTCT 57.479 40.909 0.00 0.00 0.00 3.24
27 28 3.106242 TGCTTCGACTACTCTGCAAAA 57.894 42.857 0.00 0.00 0.00 2.44
33 34 4.237724 TCGACTACTCTGCAAAACTCATG 58.762 43.478 0.00 0.00 0.00 3.07
34 35 3.369147 CGACTACTCTGCAAAACTCATGG 59.631 47.826 0.00 0.00 0.00 3.66
35 36 4.569943 GACTACTCTGCAAAACTCATGGA 58.430 43.478 0.00 0.00 0.00 3.41
37 38 2.157738 ACTCTGCAAAACTCATGGAGC 58.842 47.619 0.00 0.00 36.33 4.70
38 39 2.224719 ACTCTGCAAAACTCATGGAGCT 60.225 45.455 0.00 0.00 36.33 4.09
43 44 2.816087 GCAAAACTCATGGAGCTCTTGA 59.184 45.455 14.64 15.39 32.04 3.02
46 47 5.399858 CAAAACTCATGGAGCTCTTGATTG 58.600 41.667 14.64 13.54 32.04 2.67
48 49 2.239150 ACTCATGGAGCTCTTGATTGCT 59.761 45.455 14.64 0.00 42.82 3.91
61 63 7.441760 AGCTCTTGATTGCTCATAATAAGTCAG 59.558 37.037 0.00 0.00 33.90 3.51
95 104 9.199982 CTGATTATTGTTTTCTGTTTGAAGCAT 57.800 29.630 0.00 0.00 35.89 3.79
96 105 8.980610 TGATTATTGTTTTCTGTTTGAAGCATG 58.019 29.630 0.00 0.00 35.89 4.06
102 111 1.820519 TCTGTTTGAAGCATGATGGGC 59.179 47.619 0.00 0.00 0.00 5.36
124 133 0.036306 TGCCGTCCTTTTCTTCCTCC 59.964 55.000 0.00 0.00 0.00 4.30
127 136 1.348036 CCGTCCTTTTCTTCCTCCTGT 59.652 52.381 0.00 0.00 0.00 4.00
132 141 2.958355 CCTTTTCTTCCTCCTGTTTGCA 59.042 45.455 0.00 0.00 0.00 4.08
147 156 3.889227 GCAGCTGCATCACCGTTA 58.111 55.556 33.36 0.00 41.59 3.18
149 158 1.021390 GCAGCTGCATCACCGTTACT 61.021 55.000 33.36 0.00 41.59 2.24
155 164 1.346395 TGCATCACCGTTACTCTTGGT 59.654 47.619 0.00 0.00 36.10 3.67
164 173 0.320374 TTACTCTTGGTGACGCAGGG 59.680 55.000 0.00 0.00 0.00 4.45
165 174 0.830444 TACTCTTGGTGACGCAGGGT 60.830 55.000 0.00 0.00 32.07 4.34
195 204 1.303236 CATGGCCAAACCCTCGACA 60.303 57.895 10.96 0.00 37.83 4.35
196 205 0.893270 CATGGCCAAACCCTCGACAA 60.893 55.000 10.96 0.00 37.83 3.18
209 218 3.127548 CCCTCGACAATTTGGATCAACAG 59.872 47.826 0.78 0.00 0.00 3.16
210 219 3.753272 CCTCGACAATTTGGATCAACAGT 59.247 43.478 0.78 0.00 0.00 3.55
219 231 6.966534 ATTTGGATCAACAGTGACTTTCTT 57.033 33.333 0.00 0.00 36.31 2.52
220 232 8.352201 CAATTTGGATCAACAGTGACTTTCTTA 58.648 33.333 0.00 0.00 36.31 2.10
223 235 4.393371 GGATCAACAGTGACTTTCTTAGCC 59.607 45.833 0.00 0.00 36.31 3.93
229 241 3.686726 CAGTGACTTTCTTAGCCACATCC 59.313 47.826 0.00 0.00 39.48 3.51
230 242 3.327757 AGTGACTTTCTTAGCCACATCCA 59.672 43.478 0.00 0.00 39.48 3.41
232 244 2.673368 GACTTTCTTAGCCACATCCACG 59.327 50.000 0.00 0.00 0.00 4.94
253 265 2.263741 GCACCCCGCATCATCATCC 61.264 63.158 0.00 0.00 41.79 3.51
254 266 1.962822 CACCCCGCATCATCATCCG 60.963 63.158 0.00 0.00 0.00 4.18
255 267 2.140138 ACCCCGCATCATCATCCGA 61.140 57.895 0.00 0.00 0.00 4.55
257 269 1.069596 CCCGCATCATCATCCGACA 59.930 57.895 0.00 0.00 0.00 4.35
265 277 4.624882 GCATCATCATCCGACATTCTCTAC 59.375 45.833 0.00 0.00 0.00 2.59
266 278 5.776744 CATCATCATCCGACATTCTCTACA 58.223 41.667 0.00 0.00 0.00 2.74
271 283 3.587797 TCCGACATTCTCTACAACCAC 57.412 47.619 0.00 0.00 0.00 4.16
274 286 3.679980 CCGACATTCTCTACAACCACAAG 59.320 47.826 0.00 0.00 0.00 3.16
281 293 3.070018 CTCTACAACCACAAGCTCAAGG 58.930 50.000 0.00 0.00 0.00 3.61
284 296 1.064758 ACAACCACAAGCTCAAGGTCA 60.065 47.619 4.61 0.00 32.05 4.02
291 303 0.689623 AAGCTCAAGGTCACCCTGAG 59.310 55.000 17.27 17.27 41.56 3.35
293 305 1.203187 AGCTCAAGGTCACCCTGAGTA 60.203 52.381 21.52 0.00 41.56 2.59
299 314 4.956700 TCAAGGTCACCCTGAGTATCTTAG 59.043 45.833 0.00 0.00 41.56 2.18
301 316 3.052490 AGGTCACCCTGAGTATCTTAGCT 60.052 47.826 0.00 0.00 40.58 3.32
328 343 2.171448 GCAGGGTTCATATGTGTCTCCT 59.829 50.000 1.90 1.93 0.00 3.69
329 344 3.742640 GCAGGGTTCATATGTGTCTCCTC 60.743 52.174 1.90 0.00 0.00 3.71
330 345 3.041946 AGGGTTCATATGTGTCTCCTCC 58.958 50.000 1.90 0.00 0.00 4.30
335 350 3.724478 TCATATGTGTCTCCTCCCAGTT 58.276 45.455 1.90 0.00 0.00 3.16
336 351 4.104086 TCATATGTGTCTCCTCCCAGTTT 58.896 43.478 1.90 0.00 0.00 2.66
338 353 1.801242 TGTGTCTCCTCCCAGTTTCA 58.199 50.000 0.00 0.00 0.00 2.69
342 357 1.694696 GTCTCCTCCCAGTTTCAGTGT 59.305 52.381 0.00 0.00 0.00 3.55
343 358 1.694150 TCTCCTCCCAGTTTCAGTGTG 59.306 52.381 0.00 0.00 0.00 3.82
348 363 1.202486 TCCCAGTTTCAGTGTGACGAC 60.202 52.381 0.00 0.00 0.00 4.34
352 367 3.448686 CAGTTTCAGTGTGACGACTTCT 58.551 45.455 0.00 0.00 0.00 2.85
372 387 8.281212 ACTTCTTCTTTGCGGTATTCATTTAT 57.719 30.769 0.00 0.00 0.00 1.40
381 396 6.707711 TGCGGTATTCATTTATAACAACGAC 58.292 36.000 0.00 0.00 0.00 4.34
383 398 6.626095 GCGGTATTCATTTATAACAACGACAC 59.374 38.462 0.00 0.00 0.00 3.67
384 399 7.674472 GCGGTATTCATTTATAACAACGACACA 60.674 37.037 0.00 0.00 0.00 3.72
385 400 8.169910 CGGTATTCATTTATAACAACGACACAA 58.830 33.333 0.00 0.00 0.00 3.33
386 401 9.269415 GGTATTCATTTATAACAACGACACAAC 57.731 33.333 0.00 0.00 0.00 3.32
388 403 5.918082 TCATTTATAACAACGACACAACCG 58.082 37.500 0.00 0.00 0.00 4.44
389 404 3.791993 TTATAACAACGACACAACCGC 57.208 42.857 0.00 0.00 0.00 5.68
390 405 1.873698 ATAACAACGACACAACCGCT 58.126 45.000 0.00 0.00 0.00 5.52
392 407 0.741574 AACAACGACACAACCGCTCA 60.742 50.000 0.00 0.00 0.00 4.26
395 410 0.531974 AACGACACAACCGCTCACAT 60.532 50.000 0.00 0.00 0.00 3.21
397 412 0.110688 CGACACAACCGCTCACATTG 60.111 55.000 0.00 0.00 0.00 2.82
398 413 0.385974 GACACAACCGCTCACATTGC 60.386 55.000 0.00 0.00 0.00 3.56
401 416 1.210931 CAACCGCTCACATTGCTGG 59.789 57.895 0.00 0.00 0.00 4.85
418 442 1.144716 GGCACAGATCATCAGGCGA 59.855 57.895 0.00 0.00 0.00 5.54
447 471 3.000819 TCTGCCAACCGGGATCGT 61.001 61.111 6.32 0.00 40.01 3.73
454 478 0.739813 CAACCGGGATCGTCCTGTTC 60.740 60.000 6.32 0.00 41.42 3.18
455 479 1.189524 AACCGGGATCGTCCTGTTCA 61.190 55.000 6.32 0.00 41.42 3.18
456 480 0.976073 ACCGGGATCGTCCTGTTCAT 60.976 55.000 6.32 0.00 41.42 2.57
525 549 1.878088 GATGCTGATGGTAGCCATGTG 59.122 52.381 5.27 0.00 45.26 3.21
539 563 1.408340 CCATGTGTGGTCAAGCAACAA 59.592 47.619 0.00 0.00 40.83 2.83
542 566 2.166829 TGTGTGGTCAAGCAACAACTT 58.833 42.857 0.00 0.00 31.82 2.66
543 567 2.163412 TGTGTGGTCAAGCAACAACTTC 59.837 45.455 0.00 0.00 31.82 3.01
549 573 3.194272 AAGCAACAACTTCGGCCGC 62.194 57.895 23.51 2.10 0.00 6.53
575 599 8.980250 TCTGTAGCAGGCATGTTGATCAACAT 62.980 42.308 37.10 37.10 45.06 2.71
596 620 2.235016 GGTTGGCAATCTGGTGTTGTA 58.765 47.619 1.92 0.00 0.00 2.41
605 629 3.570926 TCTGGTGTTGTACGATCAGAC 57.429 47.619 8.70 0.00 0.00 3.51
607 631 3.057526 TCTGGTGTTGTACGATCAGACAG 60.058 47.826 8.70 8.88 0.00 3.51
613 637 3.427161 TGTACGATCAGACAGATGCAG 57.573 47.619 0.00 0.00 37.00 4.41
654 678 5.660864 TGATCATCCTACTGACACATTGGTA 59.339 40.000 0.00 0.00 0.00 3.25
663 687 0.480690 ACACATTGGTACCTGGGCAA 59.519 50.000 14.36 0.00 0.00 4.52
670 694 2.270858 TGGTACCTGGGCAATCACTTA 58.729 47.619 14.36 0.00 0.00 2.24
687 711 4.721776 TCACTTATGGAAGGTATGAGGCTT 59.278 41.667 0.00 0.00 36.95 4.35
739 766 5.482163 TGAGAATCAACTGTACATCACCA 57.518 39.130 0.00 0.00 45.97 4.17
746 773 4.775253 TCAACTGTACATCACCATACTCCA 59.225 41.667 0.00 0.00 0.00 3.86
752 779 3.813443 ACATCACCATACTCCAAGATGC 58.187 45.455 0.00 0.00 37.07 3.91
764 791 5.126067 ACTCCAAGATGCGTTATATGCTTT 58.874 37.500 0.00 0.00 0.00 3.51
781 808 3.181477 TGCTTTTGTTGAATCCACACCAG 60.181 43.478 0.00 0.00 0.00 4.00
796 823 1.346395 CACCAGCACAACCCTACTACA 59.654 52.381 0.00 0.00 0.00 2.74
800 827 3.067106 CAGCACAACCCTACTACAGTTG 58.933 50.000 0.00 0.00 45.02 3.16
801 828 2.038557 AGCACAACCCTACTACAGTTGG 59.961 50.000 7.01 3.19 44.05 3.77
803 830 3.007182 GCACAACCCTACTACAGTTGGTA 59.993 47.826 8.69 0.00 44.05 3.25
833 885 5.221441 GGGCCTACAACAACAAGAAAAGAAT 60.221 40.000 0.84 0.00 0.00 2.40
859 911 1.878088 CATTCATGAATGGAGGCCTCG 59.122 52.381 32.24 10.84 43.25 4.63
866 921 0.899720 AATGGAGGCCTCGTCGTTTA 59.100 50.000 26.36 6.86 0.00 2.01
871 926 1.219935 GGCCTCGTCGTTTATGGGT 59.780 57.895 0.00 0.00 0.00 4.51
872 927 0.808847 GGCCTCGTCGTTTATGGGTC 60.809 60.000 0.00 0.00 0.00 4.46
881 936 4.259530 CGTCGTTTATGGGTCGTCAAATAC 60.260 45.833 0.00 0.00 0.00 1.89
886 941 8.358895 TCGTTTATGGGTCGTCAAATACATATA 58.641 33.333 0.00 0.00 0.00 0.86
888 943 8.932791 GTTTATGGGTCGTCAAATACATATAGG 58.067 37.037 0.00 0.00 0.00 2.57
971 1053 2.756760 TGAGGGTGTACGAATGGTCTAC 59.243 50.000 0.00 0.00 0.00 2.59
972 1054 2.100418 GAGGGTGTACGAATGGTCTACC 59.900 54.545 0.00 0.00 35.24 3.18
973 1055 1.137675 GGGTGTACGAATGGTCTACCC 59.862 57.143 4.74 4.74 43.49 3.69
1029 1138 3.356290 AGATGATTGTGCTTACCCAACC 58.644 45.455 0.00 0.00 0.00 3.77
1098 1207 6.147985 GTCCACTTCAGAACAATTCTAGTTCC 59.852 42.308 0.00 0.00 44.91 3.62
1106 1218 7.396339 TCAGAACAATTCTAGTTCCAGCTACTA 59.604 37.037 0.00 0.00 44.91 1.82
1168 1280 3.242870 GCCAATAACTCCAATCTCTTGCG 60.243 47.826 0.00 0.00 0.00 4.85
1195 1307 5.808042 AATTCAACATCATCGACTCTTGG 57.192 39.130 0.00 0.00 0.00 3.61
1208 1320 4.106197 CGACTCTTGGCACTTACAGATAC 58.894 47.826 0.00 0.00 0.00 2.24
1227 1339 9.442047 ACAGATACTTCTTACTTTGATGAAAGG 57.558 33.333 9.54 0.00 42.66 3.11
1301 1431 2.187946 CTCCTGCAGGGCCGTTAG 59.812 66.667 32.23 17.21 35.41 2.34
1422 1561 3.165606 CCTCAAGGTGCAGCTTAGG 57.834 57.895 29.24 27.09 0.00 2.69
1474 1658 7.491048 ACAAAACAAAAGTAATGTTAGGTGCTG 59.509 33.333 0.00 0.00 39.98 4.41
1509 1693 7.411157 GCTTTTGCTATTCTTGTATTGCTTGTG 60.411 37.037 0.00 0.00 43.35 3.33
1514 1698 6.694411 GCTATTCTTGTATTGCTTGTGATTGG 59.306 38.462 0.00 0.00 0.00 3.16
1534 1718 5.562506 TGGTGTCACTCTTTATCTACGAG 57.437 43.478 2.35 0.00 0.00 4.18
1536 1720 4.398673 GGTGTCACTCTTTATCTACGAGGT 59.601 45.833 2.35 0.00 0.00 3.85
1618 1802 4.023365 CAGCAAGGTTTTCTCTTGAGAAGG 60.023 45.833 12.11 2.95 42.94 3.46
1625 1809 4.342862 TTTCTCTTGAGAAGGTGAGTGG 57.657 45.455 12.11 0.00 0.00 4.00
1686 1870 2.427812 GTTTGGGTCGGTTTTTGAAGGA 59.572 45.455 0.00 0.00 0.00 3.36
1741 1925 1.627297 GGAAGGTGCTAGACAGGGGG 61.627 65.000 0.00 0.00 0.00 5.40
1776 1960 2.237392 GGCAGAGGTTGAGACTATTGGT 59.763 50.000 0.00 0.00 0.00 3.67
1903 2087 5.071250 TGGATCTATTACCGCCATAACAACT 59.929 40.000 0.00 0.00 0.00 3.16
1931 2115 2.839975 TGATTGGTGCACTCGTTGTAA 58.160 42.857 17.98 1.82 0.00 2.41
2067 2252 3.645884 CAAAGTGGCTGATTTTGGACTG 58.354 45.455 0.00 0.00 29.69 3.51
2133 2318 5.403558 TGAGAGGAACACCTGGATATCTA 57.596 43.478 0.00 0.00 33.73 1.98
2184 2369 4.142004 ACTGAAAAAGTGGACGTCTACAGT 60.142 41.667 30.28 21.02 37.88 3.55
2247 2432 2.533266 TTGACAACTCTCAGCCTGAC 57.467 50.000 0.00 0.00 0.00 3.51
2341 2526 4.769488 AGCATAGTGACGATATGGTCTCAT 59.231 41.667 17.41 8.51 36.84 2.90
2412 2597 1.830587 ATGACAGCACTCGAAGGCCA 61.831 55.000 5.01 0.00 0.00 5.36
2447 2632 4.289672 AGTGATCAAGGTATTGGAAGGTGT 59.710 41.667 0.00 0.00 37.02 4.16
2471 2674 7.041167 TGTGATGAGTGTAGAAACTTTTGATGG 60.041 37.037 0.00 0.00 0.00 3.51
2509 2712 8.081633 TGTTTGTTCAAGATAATCCATCAACAC 58.918 33.333 0.00 0.00 35.96 3.32
2552 2755 4.508331 TCCATATTATCTGGCCCAAGGTA 58.492 43.478 0.00 0.00 33.56 3.08
2558 2761 0.766131 TCTGGCCCAAGGTAAAACGA 59.234 50.000 0.00 0.00 0.00 3.85
2562 2768 1.543871 GGCCCAAGGTAAAACGAGTGA 60.544 52.381 0.00 0.00 0.00 3.41
2570 2780 4.807443 AGGTAAAACGAGTGACTAGCTTC 58.193 43.478 0.00 0.00 0.00 3.86
2607 2831 8.729805 TTGTATGTTTTTCCTTTTGCATCTTT 57.270 26.923 0.00 0.00 0.00 2.52
2610 2835 9.650371 GTATGTTTTTCCTTTTGCATCTTTTTC 57.350 29.630 0.00 0.00 0.00 2.29
2642 2867 3.448093 TGGAAGTATGTTTGGATGGCA 57.552 42.857 0.00 0.00 0.00 4.92
2660 2885 6.127366 GGATGGCATCAAAGAATAACTTCCAA 60.127 38.462 27.39 0.00 37.93 3.53
2663 2888 6.095377 GGCATCAAAGAATAACTTCCAACAG 58.905 40.000 0.00 0.00 37.93 3.16
2686 2912 1.608055 TGTGTGCTTGATTGTCCAGG 58.392 50.000 0.00 0.00 0.00 4.45
2694 2920 4.263905 TGCTTGATTGTCCAGGGAAGTATT 60.264 41.667 0.00 0.00 0.00 1.89
2695 2921 4.096984 GCTTGATTGTCCAGGGAAGTATTG 59.903 45.833 0.00 0.00 0.00 1.90
2696 2922 4.927267 TGATTGTCCAGGGAAGTATTGT 57.073 40.909 0.00 0.00 0.00 2.71
2697 2923 6.381498 TTGATTGTCCAGGGAAGTATTGTA 57.619 37.500 0.00 0.00 0.00 2.41
2701 2927 4.523083 TGTCCAGGGAAGTATTGTATTGC 58.477 43.478 0.00 0.00 0.00 3.56
2712 2938 6.406692 AGTATTGTATTGCCGACTCATACT 57.593 37.500 0.00 0.00 0.00 2.12
2715 2941 6.604735 ATTGTATTGCCGACTCATACTTTC 57.395 37.500 0.00 0.00 0.00 2.62
2718 2944 3.678056 TTGCCGACTCATACTTTCAGT 57.322 42.857 0.00 0.00 0.00 3.41
2719 2945 4.794278 TTGCCGACTCATACTTTCAGTA 57.206 40.909 0.00 0.00 34.82 2.74
2720 2946 4.371855 TGCCGACTCATACTTTCAGTAG 57.628 45.455 0.00 0.00 33.66 2.57
2724 2950 5.333513 CCGACTCATACTTTCAGTAGTGAC 58.666 45.833 0.00 0.00 33.66 3.67
2733 2975 5.858381 ACTTTCAGTAGTGACACATGTGAT 58.142 37.500 31.94 16.02 30.10 3.06
2742 2984 3.439825 GTGACACATGTGATGTATGCCAA 59.560 43.478 31.94 2.32 42.70 4.52
2813 3059 2.895424 GCCTGCTGTGGTAGGGTGT 61.895 63.158 2.67 0.00 44.07 4.16
2814 3060 1.003355 CCTGCTGTGGTAGGGTGTG 60.003 63.158 0.00 0.00 40.89 3.82
2816 3062 0.396435 CTGCTGTGGTAGGGTGTGAA 59.604 55.000 0.00 0.00 0.00 3.18
2817 3063 0.840617 TGCTGTGGTAGGGTGTGAAA 59.159 50.000 0.00 0.00 0.00 2.69
2818 3064 1.235724 GCTGTGGTAGGGTGTGAAAC 58.764 55.000 0.00 0.00 37.35 2.78
2820 3066 2.038033 GCTGTGGTAGGGTGTGAAACTA 59.962 50.000 0.00 0.00 38.04 2.24
2821 3067 3.660865 CTGTGGTAGGGTGTGAAACTAC 58.339 50.000 0.00 0.00 38.04 2.73
2822 3068 3.039743 TGTGGTAGGGTGTGAAACTACA 58.960 45.455 0.00 0.00 38.99 2.74
2823 3069 3.649023 TGTGGTAGGGTGTGAAACTACAT 59.351 43.478 0.00 0.00 38.99 2.29
2824 3070 4.103469 TGTGGTAGGGTGTGAAACTACATT 59.897 41.667 0.00 0.00 38.99 2.71
2825 3071 5.307456 TGTGGTAGGGTGTGAAACTACATTA 59.693 40.000 0.00 0.00 38.99 1.90
2826 3072 5.873164 GTGGTAGGGTGTGAAACTACATTAG 59.127 44.000 0.00 0.00 38.99 1.73
2827 3073 5.046159 TGGTAGGGTGTGAAACTACATTAGG 60.046 44.000 0.00 0.00 38.99 2.69
2868 3114 9.295825 GATAATTTATCCACATATCCAACACCA 57.704 33.333 5.26 0.00 0.00 4.17
2891 3137 6.460123 CCATGTTGGTCCAGCATTAATCTTAC 60.460 42.308 17.87 0.00 33.24 2.34
2902 3148 5.191722 AGCATTAATCTTACCTGTCCCAAGA 59.808 40.000 0.00 0.00 33.12 3.02
2912 3158 2.030027 TGTCCCAAGATGAGACAGGT 57.970 50.000 0.00 0.00 35.67 4.00
2914 3160 1.065854 GTCCCAAGATGAGACAGGTGG 60.066 57.143 0.00 0.00 0.00 4.61
2915 3161 0.393537 CCCAAGATGAGACAGGTGGC 60.394 60.000 0.00 0.00 0.00 5.01
2916 3162 0.617413 CCAAGATGAGACAGGTGGCT 59.383 55.000 0.00 0.00 34.94 4.75
2917 3163 1.004044 CCAAGATGAGACAGGTGGCTT 59.996 52.381 0.00 0.00 30.09 4.35
2918 3164 2.553904 CCAAGATGAGACAGGTGGCTTT 60.554 50.000 0.00 0.00 30.09 3.51
2920 3166 3.064900 AGATGAGACAGGTGGCTTTTC 57.935 47.619 0.00 0.00 30.09 2.29
2921 3167 2.641815 AGATGAGACAGGTGGCTTTTCT 59.358 45.455 0.00 0.00 30.09 2.52
2922 3168 3.073650 AGATGAGACAGGTGGCTTTTCTT 59.926 43.478 0.00 0.00 30.09 2.52
2923 3169 2.575532 TGAGACAGGTGGCTTTTCTTG 58.424 47.619 0.00 0.00 30.09 3.02
2924 3170 1.268079 GAGACAGGTGGCTTTTCTTGC 59.732 52.381 0.00 0.00 30.09 4.01
2925 3171 1.032014 GACAGGTGGCTTTTCTTGCA 58.968 50.000 0.00 0.00 0.00 4.08
2926 3172 1.408702 GACAGGTGGCTTTTCTTGCAA 59.591 47.619 0.00 0.00 0.00 4.08
2927 3173 2.036346 GACAGGTGGCTTTTCTTGCAAT 59.964 45.455 0.00 0.00 0.00 3.56
2928 3174 3.230134 ACAGGTGGCTTTTCTTGCAATA 58.770 40.909 0.00 0.00 0.00 1.90
2929 3175 3.256631 ACAGGTGGCTTTTCTTGCAATAG 59.743 43.478 0.00 0.00 0.00 1.73
2930 3176 3.507233 CAGGTGGCTTTTCTTGCAATAGA 59.493 43.478 0.00 0.00 0.00 1.98
2932 3178 4.774200 AGGTGGCTTTTCTTGCAATAGATT 59.226 37.500 0.00 0.00 0.00 2.40
2933 3179 5.246883 AGGTGGCTTTTCTTGCAATAGATTT 59.753 36.000 0.00 0.00 0.00 2.17
2934 3180 5.934043 GGTGGCTTTTCTTGCAATAGATTTT 59.066 36.000 0.00 0.00 0.00 1.82
2935 3181 6.427853 GGTGGCTTTTCTTGCAATAGATTTTT 59.572 34.615 0.00 0.00 0.00 1.94
2936 3182 7.360353 GGTGGCTTTTCTTGCAATAGATTTTTC 60.360 37.037 0.00 0.00 0.00 2.29
2937 3183 7.386025 GTGGCTTTTCTTGCAATAGATTTTTCT 59.614 33.333 0.00 0.00 0.00 2.52
2938 3184 7.933033 TGGCTTTTCTTGCAATAGATTTTTCTT 59.067 29.630 0.00 0.00 0.00 2.52
2939 3185 8.438513 GGCTTTTCTTGCAATAGATTTTTCTTC 58.561 33.333 0.00 0.00 0.00 2.87
2940 3186 9.201127 GCTTTTCTTGCAATAGATTTTTCTTCT 57.799 29.630 0.00 0.00 0.00 2.85
2956 3202 9.624697 ATTTTTCTTCTTTGTTTTGAAAAAGGC 57.375 25.926 14.30 0.00 44.34 4.35
2957 3203 7.736447 TTTCTTCTTTGTTTTGAAAAAGGCA 57.264 28.000 0.00 0.00 34.75 4.75
2958 3204 6.966435 TCTTCTTTGTTTTGAAAAAGGCAG 57.034 33.333 0.00 0.00 34.75 4.85
2959 3205 5.874261 TCTTCTTTGTTTTGAAAAAGGCAGG 59.126 36.000 0.00 0.00 34.75 4.85
2960 3206 3.938334 TCTTTGTTTTGAAAAAGGCAGGC 59.062 39.130 0.00 0.00 34.75 4.85
2961 3207 3.625649 TTGTTTTGAAAAAGGCAGGCT 57.374 38.095 0.00 0.00 0.00 4.58
2966 3212 2.071778 TGAAAAAGGCAGGCTTGTCT 57.928 45.000 10.56 0.00 42.21 3.41
2977 3223 3.065925 GCAGGCTTGTCTTACATGGATTC 59.934 47.826 0.00 0.00 0.00 2.52
2978 3224 4.521146 CAGGCTTGTCTTACATGGATTCT 58.479 43.478 0.00 0.00 0.00 2.40
2979 3225 4.334759 CAGGCTTGTCTTACATGGATTCTG 59.665 45.833 0.00 0.00 0.00 3.02
2980 3226 3.065925 GGCTTGTCTTACATGGATTCTGC 59.934 47.826 0.00 0.00 0.00 4.26
2981 3227 3.242543 GCTTGTCTTACATGGATTCTGCG 60.243 47.826 0.00 0.00 0.00 5.18
2982 3228 3.610040 TGTCTTACATGGATTCTGCGT 57.390 42.857 0.00 0.00 0.00 5.24
2985 3231 2.158957 TCTTACATGGATTCTGCGTCCC 60.159 50.000 0.00 0.00 34.76 4.46
2986 3232 1.496060 TACATGGATTCTGCGTCCCT 58.504 50.000 0.00 0.00 34.76 4.20
2988 3234 0.467384 CATGGATTCTGCGTCCCTCT 59.533 55.000 0.00 0.00 34.76 3.69
2990 3236 1.330655 TGGATTCTGCGTCCCTCTCC 61.331 60.000 0.00 0.00 34.76 3.71
2991 3237 1.045911 GGATTCTGCGTCCCTCTCCT 61.046 60.000 0.00 0.00 0.00 3.69
2992 3238 1.693627 GATTCTGCGTCCCTCTCCTA 58.306 55.000 0.00 0.00 0.00 2.94
2993 3239 2.243810 GATTCTGCGTCCCTCTCCTAT 58.756 52.381 0.00 0.00 0.00 2.57
2994 3240 2.160721 TTCTGCGTCCCTCTCCTATT 57.839 50.000 0.00 0.00 0.00 1.73
2995 3241 2.160721 TCTGCGTCCCTCTCCTATTT 57.839 50.000 0.00 0.00 0.00 1.40
2996 3242 2.032620 TCTGCGTCCCTCTCCTATTTC 58.967 52.381 0.00 0.00 0.00 2.17
2997 3243 2.035632 CTGCGTCCCTCTCCTATTTCT 58.964 52.381 0.00 0.00 0.00 2.52
2998 3244 3.117625 TCTGCGTCCCTCTCCTATTTCTA 60.118 47.826 0.00 0.00 0.00 2.10
2999 3245 2.957006 TGCGTCCCTCTCCTATTTCTAC 59.043 50.000 0.00 0.00 0.00 2.59
3000 3246 2.957006 GCGTCCCTCTCCTATTTCTACA 59.043 50.000 0.00 0.00 0.00 2.74
3001 3247 3.243468 GCGTCCCTCTCCTATTTCTACAC 60.243 52.174 0.00 0.00 0.00 2.90
3002 3248 4.208746 CGTCCCTCTCCTATTTCTACACT 58.791 47.826 0.00 0.00 0.00 3.55
3003 3249 4.645588 CGTCCCTCTCCTATTTCTACACTT 59.354 45.833 0.00 0.00 0.00 3.16
3004 3250 5.450688 CGTCCCTCTCCTATTTCTACACTTG 60.451 48.000 0.00 0.00 0.00 3.16
3005 3251 5.657302 GTCCCTCTCCTATTTCTACACTTGA 59.343 44.000 0.00 0.00 0.00 3.02
3006 3252 5.894393 TCCCTCTCCTATTTCTACACTTGAG 59.106 44.000 0.00 0.00 0.00 3.02
3007 3253 5.894393 CCCTCTCCTATTTCTACACTTGAGA 59.106 44.000 0.00 0.00 0.00 3.27
3008 3254 6.553100 CCCTCTCCTATTTCTACACTTGAGAT 59.447 42.308 0.00 0.00 0.00 2.75
3009 3255 7.726291 CCCTCTCCTATTTCTACACTTGAGATA 59.274 40.741 0.00 0.00 0.00 1.98
3010 3256 9.308000 CCTCTCCTATTTCTACACTTGAGATAT 57.692 37.037 0.00 0.00 0.00 1.63
3057 3303 7.936496 ATTTGATTATGTGTGACACCATACA 57.064 32.000 13.85 7.69 46.05 2.29
3058 3304 7.751768 TTTGATTATGTGTGACACCATACAA 57.248 32.000 13.85 10.11 45.33 2.41
3061 3307 8.432110 TGATTATGTGTGACACCATACAATAC 57.568 34.615 13.85 0.37 45.33 1.89
3062 3308 8.043710 TGATTATGTGTGACACCATACAATACA 58.956 33.333 13.85 5.30 45.33 2.29
3063 3309 8.978874 ATTATGTGTGACACCATACAATACAT 57.021 30.769 13.85 10.89 45.33 2.29
3064 3310 6.925610 ATGTGTGACACCATACAATACATC 57.074 37.500 13.85 0.00 45.33 3.06
3065 3311 6.048732 TGTGTGACACCATACAATACATCT 57.951 37.500 13.85 0.00 40.66 2.90
3066 3312 5.874261 TGTGTGACACCATACAATACATCTG 59.126 40.000 13.85 0.00 40.66 2.90
3067 3313 6.106003 GTGTGACACCATACAATACATCTGA 58.894 40.000 3.92 0.00 34.93 3.27
3068 3314 6.593770 GTGTGACACCATACAATACATCTGAA 59.406 38.462 3.92 0.00 34.93 3.02
3069 3315 6.818142 TGTGACACCATACAATACATCTGAAG 59.182 38.462 2.45 0.00 0.00 3.02
3070 3316 6.258727 GTGACACCATACAATACATCTGAAGG 59.741 42.308 0.00 0.00 0.00 3.46
3078 3324 9.559732 CATACAATACATCTGAAGGTGGAAATA 57.440 33.333 0.00 0.00 0.00 1.40
3084 3330 7.865706 ACATCTGAAGGTGGAAATACATAAC 57.134 36.000 0.00 0.00 0.00 1.89
3086 3332 8.055181 ACATCTGAAGGTGGAAATACATAACAT 58.945 33.333 0.00 0.00 0.00 2.71
3087 3333 8.906867 CATCTGAAGGTGGAAATACATAACATT 58.093 33.333 0.00 0.00 0.00 2.71
3090 3336 8.415950 TGAAGGTGGAAATACATAACATTTGT 57.584 30.769 0.00 0.00 0.00 2.83
3091 3337 8.865090 TGAAGGTGGAAATACATAACATTTGTT 58.135 29.630 1.08 1.08 41.73 2.83
3092 3338 9.705290 GAAGGTGGAAATACATAACATTTGTTT 57.295 29.630 0.63 0.00 39.31 2.83
3095 3341 9.705290 GGTGGAAATACATAACATTTGTTTTCT 57.295 29.630 0.63 0.00 39.31 2.52
3122 3376 4.985044 ACGGAACTGAAAATAGTTGACG 57.015 40.909 0.00 0.00 40.78 4.35
3132 3386 8.985805 ACTGAAAATAGTTGACGTTTAGTTAGG 58.014 33.333 0.00 0.00 0.00 2.69
3135 3389 6.716898 AATAGTTGACGTTTAGTTAGGTGC 57.283 37.500 0.00 0.00 0.00 5.01
3137 3391 4.444536 AGTTGACGTTTAGTTAGGTGCAA 58.555 39.130 0.00 0.00 0.00 4.08
3138 3392 4.510340 AGTTGACGTTTAGTTAGGTGCAAG 59.490 41.667 0.00 0.00 0.00 4.01
3140 3394 4.053295 TGACGTTTAGTTAGGTGCAAGTC 58.947 43.478 0.00 0.00 0.00 3.01
3142 3396 4.056050 ACGTTTAGTTAGGTGCAAGTCTG 58.944 43.478 0.00 0.00 0.00 3.51
3149 3403 1.871080 AGGTGCAAGTCTGAAACTCG 58.129 50.000 0.00 0.00 37.17 4.18
3155 3416 2.545952 GCAAGTCTGAAACTCGACTGGA 60.546 50.000 0.00 0.00 40.18 3.86
3166 3427 6.764085 TGAAACTCGACTGGAATGAAAGTTAA 59.236 34.615 0.00 0.00 0.00 2.01
3167 3428 7.444183 TGAAACTCGACTGGAATGAAAGTTAAT 59.556 33.333 0.00 0.00 0.00 1.40
3170 3431 7.612677 ACTCGACTGGAATGAAAGTTAATAGT 58.387 34.615 0.00 0.00 0.00 2.12
3171 3432 7.760340 ACTCGACTGGAATGAAAGTTAATAGTC 59.240 37.037 0.00 0.00 0.00 2.59
3172 3433 7.039882 TCGACTGGAATGAAAGTTAATAGTCC 58.960 38.462 0.00 0.00 30.95 3.85
3173 3434 7.042335 CGACTGGAATGAAAGTTAATAGTCCT 58.958 38.462 0.00 0.00 30.95 3.85
3212 3473 6.601332 TCAAACTGAATTCAAGGTAGAAGGT 58.399 36.000 9.88 0.00 0.00 3.50
3218 3479 7.780271 ACTGAATTCAAGGTAGAAGGTTTTCTT 59.220 33.333 9.88 0.00 40.79 2.52
3219 3480 7.940850 TGAATTCAAGGTAGAAGGTTTTCTTG 58.059 34.615 5.45 0.00 40.79 3.02
3235 3496 4.494350 TTCTTGATGTTCTTCTGCAAGC 57.506 40.909 0.00 0.00 36.72 4.01
3237 3498 4.898320 TCTTGATGTTCTTCTGCAAGCTA 58.102 39.130 0.00 0.00 36.72 3.32
3246 3507 1.783284 TCTGCAAGCTACAACTCACG 58.217 50.000 0.00 0.00 0.00 4.35
3249 3510 3.192633 TCTGCAAGCTACAACTCACGATA 59.807 43.478 0.00 0.00 0.00 2.92
3252 3513 5.842907 TGCAAGCTACAACTCACGATATAT 58.157 37.500 0.00 0.00 0.00 0.86
3256 3517 7.116948 GCAAGCTACAACTCACGATATATTGAT 59.883 37.037 6.98 0.00 0.00 2.57
3257 3518 8.430828 CAAGCTACAACTCACGATATATTGATG 58.569 37.037 6.98 2.31 0.00 3.07
3258 3519 7.661968 AGCTACAACTCACGATATATTGATGT 58.338 34.615 6.98 3.57 0.00 3.06
3259 3520 7.596621 AGCTACAACTCACGATATATTGATGTG 59.403 37.037 6.98 4.82 0.00 3.21
3263 3524 6.775939 ACTCACGATATATTGATGTGCAAG 57.224 37.500 6.98 2.53 40.42 4.01
3266 3527 6.279882 TCACGATATATTGATGTGCAAGTGA 58.720 36.000 6.98 0.00 40.42 3.41
3268 3529 7.042523 TCACGATATATTGATGTGCAAGTGAAG 60.043 37.037 6.98 0.00 40.42 3.02
3270 3531 7.042456 ACGATATATTGATGTGCAAGTGAAGTC 60.042 37.037 6.98 0.00 40.42 3.01
3271 3532 7.042523 CGATATATTGATGTGCAAGTGAAGTCA 60.043 37.037 0.00 0.00 40.42 3.41
3272 3533 8.687292 ATATATTGATGTGCAAGTGAAGTCAT 57.313 30.769 0.00 0.00 40.42 3.06
3273 3534 4.492791 TTGATGTGCAAGTGAAGTCATG 57.507 40.909 0.00 0.00 31.55 3.07
3274 3535 3.479489 TGATGTGCAAGTGAAGTCATGT 58.521 40.909 0.00 0.00 0.00 3.21
3276 3537 2.642427 TGTGCAAGTGAAGTCATGTGT 58.358 42.857 0.00 0.00 0.00 3.72
3278 3539 3.809279 TGTGCAAGTGAAGTCATGTGTAG 59.191 43.478 0.00 0.00 0.00 2.74
3279 3540 3.809832 GTGCAAGTGAAGTCATGTGTAGT 59.190 43.478 0.00 0.00 0.00 2.73
3280 3541 4.058124 TGCAAGTGAAGTCATGTGTAGTC 58.942 43.478 0.00 0.00 0.00 2.59
3282 3543 4.752101 GCAAGTGAAGTCATGTGTAGTCTT 59.248 41.667 0.00 0.00 0.00 3.01
3284 3545 6.238484 GCAAGTGAAGTCATGTGTAGTCTTTT 60.238 38.462 0.00 0.00 0.00 2.27
3285 3546 7.042051 GCAAGTGAAGTCATGTGTAGTCTTTTA 60.042 37.037 0.00 0.00 0.00 1.52
3309 3581 6.389830 AATATTTGACACACACAAGCTTCA 57.610 33.333 0.00 0.00 0.00 3.02
3312 3584 3.535280 TGACACACACAAGCTTCAGTA 57.465 42.857 0.00 0.00 0.00 2.74
3320 3592 4.024556 CACACAAGCTTCAGTACTTTCCAG 60.025 45.833 0.00 0.00 0.00 3.86
3323 3595 4.130118 CAAGCTTCAGTACTTTCCAGTGT 58.870 43.478 0.00 0.00 34.06 3.55
3325 3597 4.884247 AGCTTCAGTACTTTCCAGTGTAC 58.116 43.478 0.00 0.00 39.26 2.90
3332 3604 6.229936 AGTACTTTCCAGTGTACTGACAAA 57.770 37.500 13.36 10.19 45.05 2.83
3333 3605 6.827727 AGTACTTTCCAGTGTACTGACAAAT 58.172 36.000 13.36 0.00 45.05 2.32
3334 3606 7.959175 AGTACTTTCCAGTGTACTGACAAATA 58.041 34.615 13.36 0.00 45.05 1.40
3345 3619 6.092259 GTGTACTGACAAATACCATGAAGGTC 59.908 42.308 0.00 0.00 42.04 3.85
3347 3621 8.008586 TGTACTGACAAATACCATGAAGGTCTG 61.009 40.741 0.00 0.00 40.87 3.51
3355 3629 3.498927 CCATGAAGGTCTGTGCAATTC 57.501 47.619 0.00 0.00 0.00 2.17
3357 3631 3.119602 CCATGAAGGTCTGTGCAATTCAG 60.120 47.826 0.00 0.00 33.73 3.02
3358 3632 3.213206 TGAAGGTCTGTGCAATTCAGT 57.787 42.857 3.05 0.00 34.86 3.41
3364 3638 4.887071 AGGTCTGTGCAATTCAGTTTACAA 59.113 37.500 3.05 0.00 34.86 2.41
3366 3640 5.221048 GGTCTGTGCAATTCAGTTTACAAGT 60.221 40.000 3.05 0.00 34.86 3.16
3369 3643 3.735746 GTGCAATTCAGTTTACAAGTGGC 59.264 43.478 0.00 0.00 32.61 5.01
3370 3644 3.382865 TGCAATTCAGTTTACAAGTGGCA 59.617 39.130 0.00 0.00 32.61 4.92
3371 3645 3.735746 GCAATTCAGTTTACAAGTGGCAC 59.264 43.478 10.29 10.29 32.61 5.01
3372 3646 4.499696 GCAATTCAGTTTACAAGTGGCACT 60.500 41.667 15.88 15.88 32.61 4.40
3373 3647 4.836125 ATTCAGTTTACAAGTGGCACTG 57.164 40.909 22.83 17.05 36.91 3.66
3374 3648 2.571212 TCAGTTTACAAGTGGCACTGG 58.429 47.619 22.83 21.59 36.34 4.00
3375 3649 1.001378 CAGTTTACAAGTGGCACTGGC 60.001 52.381 22.83 5.02 40.13 4.85
3376 3650 0.040425 GTTTACAAGTGGCACTGGCG 60.040 55.000 22.83 15.09 42.47 5.69
3377 3651 1.169661 TTTACAAGTGGCACTGGCGG 61.170 55.000 22.83 13.47 42.47 6.13
3378 3652 2.332312 TTACAAGTGGCACTGGCGGT 62.332 55.000 22.83 18.29 42.47 5.68
3379 3653 2.725203 TACAAGTGGCACTGGCGGTC 62.725 60.000 22.83 0.00 42.47 4.79
3380 3654 3.560251 AAGTGGCACTGGCGGTCT 61.560 61.111 22.83 0.00 42.47 3.85
3381 3655 3.832237 AAGTGGCACTGGCGGTCTG 62.832 63.158 22.83 0.00 42.47 3.51
3383 3657 4.007644 TGGCACTGGCGGTCTGAG 62.008 66.667 0.00 0.00 42.47 3.35
3384 3658 3.695606 GGCACTGGCGGTCTGAGA 61.696 66.667 0.00 0.00 42.47 3.27
3385 3659 2.343758 GCACTGGCGGTCTGAGAA 59.656 61.111 0.00 0.00 0.00 2.87
3386 3660 2.029844 GCACTGGCGGTCTGAGAAC 61.030 63.158 0.00 0.00 0.00 3.01
3387 3661 1.668294 CACTGGCGGTCTGAGAACT 59.332 57.895 0.00 0.00 0.00 3.01
3388 3662 0.034059 CACTGGCGGTCTGAGAACTT 59.966 55.000 0.00 0.00 0.00 2.66
3389 3663 1.272490 CACTGGCGGTCTGAGAACTTA 59.728 52.381 0.00 0.00 0.00 2.24
3390 3664 1.272769 ACTGGCGGTCTGAGAACTTAC 59.727 52.381 0.00 0.00 0.00 2.34
3391 3665 0.242825 TGGCGGTCTGAGAACTTACG 59.757 55.000 0.00 0.00 0.00 3.18
3393 3667 0.109226 GCGGTCTGAGAACTTACGCT 60.109 55.000 0.00 0.00 41.99 5.07
3394 3668 1.618861 CGGTCTGAGAACTTACGCTG 58.381 55.000 0.00 0.00 0.00 5.18
3395 3669 1.351153 GGTCTGAGAACTTACGCTGC 58.649 55.000 0.00 0.00 0.00 5.25
3396 3670 0.985549 GTCTGAGAACTTACGCTGCG 59.014 55.000 21.91 21.91 0.00 5.18
3397 3671 0.109272 TCTGAGAACTTACGCTGCGG 60.109 55.000 26.95 11.12 0.00 5.69
3398 3672 1.078759 CTGAGAACTTACGCTGCGGG 61.079 60.000 26.95 17.18 0.00 6.13
3399 3673 1.080025 GAGAACTTACGCTGCGGGT 60.080 57.895 26.95 17.82 0.00 5.28
3400 3674 1.352156 GAGAACTTACGCTGCGGGTG 61.352 60.000 26.95 16.57 0.00 4.61
3401 3675 3.023591 GAACTTACGCTGCGGGTGC 62.024 63.158 26.95 15.82 43.20 5.01
3411 3685 2.671619 GCGGGTGCACTTAAGCCA 60.672 61.111 17.98 0.00 42.15 4.75
3412 3686 2.046285 GCGGGTGCACTTAAGCCAT 61.046 57.895 17.98 0.00 42.15 4.40
3413 3687 1.802636 CGGGTGCACTTAAGCCATG 59.197 57.895 17.98 0.00 34.77 3.66
3414 3688 0.676466 CGGGTGCACTTAAGCCATGA 60.676 55.000 17.98 0.00 34.77 3.07
3415 3689 1.767759 GGGTGCACTTAAGCCATGAT 58.232 50.000 17.98 0.00 35.21 2.45
3417 3691 2.618709 GGGTGCACTTAAGCCATGATAC 59.381 50.000 17.98 0.00 35.21 2.24
3418 3692 3.545703 GGTGCACTTAAGCCATGATACT 58.454 45.455 17.98 0.00 0.00 2.12
3419 3693 3.947834 GGTGCACTTAAGCCATGATACTT 59.052 43.478 17.98 0.00 0.00 2.24
3423 3697 4.142403 GCACTTAAGCCATGATACTTGCAA 60.142 41.667 1.29 0.00 0.00 4.08
3425 3699 5.801947 CACTTAAGCCATGATACTTGCAAAC 59.198 40.000 1.29 0.00 0.00 2.93
3426 3700 3.874392 AAGCCATGATACTTGCAAACC 57.126 42.857 0.00 0.00 0.00 3.27
3427 3701 1.745087 AGCCATGATACTTGCAAACCG 59.255 47.619 0.00 0.00 0.00 4.44
3428 3702 1.202290 GCCATGATACTTGCAAACCGG 60.202 52.381 0.00 0.00 0.00 5.28
3429 3703 2.364632 CCATGATACTTGCAAACCGGA 58.635 47.619 9.46 0.00 0.00 5.14
3430 3704 2.752354 CCATGATACTTGCAAACCGGAA 59.248 45.455 9.46 0.00 0.00 4.30
3432 3706 4.321601 CCATGATACTTGCAAACCGGAAAA 60.322 41.667 9.46 0.00 0.00 2.29
3433 3707 4.920640 TGATACTTGCAAACCGGAAAAA 57.079 36.364 9.46 0.00 0.00 1.94
3434 3708 4.612943 TGATACTTGCAAACCGGAAAAAC 58.387 39.130 9.46 0.00 0.00 2.43
3435 3709 2.303163 ACTTGCAAACCGGAAAAACC 57.697 45.000 9.46 0.00 0.00 3.27
3436 3710 1.134640 ACTTGCAAACCGGAAAAACCC 60.135 47.619 9.46 0.00 34.64 4.11
3446 3720 3.734776 CGGAAAAACCCGTCATAGAAC 57.265 47.619 0.00 0.00 44.23 3.01
3448 3722 3.749609 CGGAAAAACCCGTCATAGAACTT 59.250 43.478 0.00 0.00 44.23 2.66
3449 3723 4.378046 CGGAAAAACCCGTCATAGAACTTG 60.378 45.833 0.00 0.00 44.23 3.16
3450 3724 4.517832 GGAAAAACCCGTCATAGAACTTGT 59.482 41.667 0.00 0.00 0.00 3.16
3452 3726 6.373495 GGAAAAACCCGTCATAGAACTTGTAT 59.627 38.462 0.00 0.00 0.00 2.29
3453 3727 7.094506 GGAAAAACCCGTCATAGAACTTGTATT 60.095 37.037 0.00 0.00 0.00 1.89
3454 3728 8.851541 AAAAACCCGTCATAGAACTTGTATTA 57.148 30.769 0.00 0.00 0.00 0.98
3457 3731 6.570692 ACCCGTCATAGAACTTGTATTACAG 58.429 40.000 0.00 0.00 0.00 2.74
3458 3732 5.983720 CCCGTCATAGAACTTGTATTACAGG 59.016 44.000 4.52 4.52 0.00 4.00
3459 3733 6.406624 CCCGTCATAGAACTTGTATTACAGGT 60.407 42.308 5.81 5.81 40.32 4.00
3460 3734 6.475727 CCGTCATAGAACTTGTATTACAGGTG 59.524 42.308 11.81 0.77 37.44 4.00
3461 3735 6.019801 CGTCATAGAACTTGTATTACAGGTGC 60.020 42.308 11.81 10.20 37.44 5.01
3462 3736 6.816640 GTCATAGAACTTGTATTACAGGTGCA 59.183 38.462 16.87 5.96 37.44 4.57
3463 3737 7.010552 GTCATAGAACTTGTATTACAGGTGCAG 59.989 40.741 16.87 8.23 37.44 4.41
3464 3738 5.483685 AGAACTTGTATTACAGGTGCAGA 57.516 39.130 16.87 0.00 37.44 4.26
3465 3739 6.054860 AGAACTTGTATTACAGGTGCAGAT 57.945 37.500 16.87 0.84 37.44 2.90
3466 3740 7.182817 AGAACTTGTATTACAGGTGCAGATA 57.817 36.000 16.87 0.00 37.44 1.98
3467 3741 7.268586 AGAACTTGTATTACAGGTGCAGATAG 58.731 38.462 16.87 3.14 37.44 2.08
3468 3742 5.918608 ACTTGTATTACAGGTGCAGATAGG 58.081 41.667 10.46 0.00 37.03 2.57
3470 3744 5.531122 TGTATTACAGGTGCAGATAGGTC 57.469 43.478 0.00 0.00 0.00 3.85
3471 3745 4.959839 TGTATTACAGGTGCAGATAGGTCA 59.040 41.667 0.00 0.00 0.00 4.02
3472 3746 3.887621 TTACAGGTGCAGATAGGTCAC 57.112 47.619 0.00 0.00 0.00 3.67
3473 3747 1.644509 ACAGGTGCAGATAGGTCACA 58.355 50.000 0.00 0.00 32.69 3.58
3474 3748 1.276421 ACAGGTGCAGATAGGTCACAC 59.724 52.381 0.00 0.00 34.65 3.82
3475 3749 1.276138 CAGGTGCAGATAGGTCACACA 59.724 52.381 0.00 0.00 36.16 3.72
3477 3751 1.406069 GGTGCAGATAGGTCACACAGG 60.406 57.143 0.00 0.00 36.16 4.00
3478 3752 1.276421 GTGCAGATAGGTCACACAGGT 59.724 52.381 0.00 0.00 35.17 4.00
3479 3753 1.977854 TGCAGATAGGTCACACAGGTT 59.022 47.619 0.00 0.00 0.00 3.50
3481 3755 3.774766 TGCAGATAGGTCACACAGGTTAT 59.225 43.478 0.00 0.00 0.00 1.89
3482 3756 4.141937 TGCAGATAGGTCACACAGGTTATC 60.142 45.833 0.00 0.00 0.00 1.75
3483 3757 4.100189 GCAGATAGGTCACACAGGTTATCT 59.900 45.833 0.00 0.00 0.00 1.98
3488 3762 3.008049 AGGTCACACAGGTTATCTGAACC 59.992 47.826 0.00 1.61 46.18 3.62
3489 3763 3.244422 GGTCACACAGGTTATCTGAACCA 60.244 47.826 0.00 0.00 46.18 3.67
3490 3764 3.997021 GTCACACAGGTTATCTGAACCAG 59.003 47.826 0.00 3.51 46.18 4.00
3492 3766 2.290323 ACACAGGTTATCTGAACCAGCC 60.290 50.000 0.00 0.00 46.18 4.85
3493 3767 1.985159 ACAGGTTATCTGAACCAGCCA 59.015 47.619 0.00 0.00 46.18 4.75
3494 3768 2.026822 ACAGGTTATCTGAACCAGCCAG 60.027 50.000 0.00 0.00 46.18 4.85
3495 3769 1.065126 AGGTTATCTGAACCAGCCAGC 60.065 52.381 9.06 0.00 42.69 4.85
3496 3770 1.065126 GGTTATCTGAACCAGCCAGCT 60.065 52.381 1.55 0.00 40.03 4.24
3497 3771 2.012673 GTTATCTGAACCAGCCAGCTG 58.987 52.381 12.78 12.78 43.26 4.24
3498 3772 0.107508 TATCTGAACCAGCCAGCTGC 60.108 55.000 14.26 3.91 42.35 5.25
3499 3773 2.833604 ATCTGAACCAGCCAGCTGCC 62.834 60.000 14.26 0.00 42.35 4.85
3507 3781 4.056125 GCCAGCTGCCCGGTTTTC 62.056 66.667 8.66 0.00 0.00 2.29
3508 3782 2.282462 CCAGCTGCCCGGTTTTCT 60.282 61.111 8.66 0.00 0.00 2.52
3509 3783 2.335712 CCAGCTGCCCGGTTTTCTC 61.336 63.158 8.66 0.00 0.00 2.87
3510 3784 2.034221 AGCTGCCCGGTTTTCTCC 59.966 61.111 0.00 0.00 0.00 3.71
3511 3785 3.062466 GCTGCCCGGTTTTCTCCC 61.062 66.667 0.00 0.00 0.00 4.30
3512 3786 2.757077 CTGCCCGGTTTTCTCCCT 59.243 61.111 0.00 0.00 0.00 4.20
3513 3787 1.377333 CTGCCCGGTTTTCTCCCTC 60.377 63.158 0.00 0.00 0.00 4.30
3514 3788 1.842381 CTGCCCGGTTTTCTCCCTCT 61.842 60.000 0.00 0.00 0.00 3.69
3518 3792 1.405121 CCCGGTTTTCTCCCTCTAACG 60.405 57.143 0.00 0.00 0.00 3.18
3519 3793 1.405121 CCGGTTTTCTCCCTCTAACGG 60.405 57.143 0.00 0.00 0.00 4.44
3520 3794 1.405121 CGGTTTTCTCCCTCTAACGGG 60.405 57.143 0.00 0.00 46.13 5.28
3521 3795 1.678123 GGTTTTCTCCCTCTAACGGGC 60.678 57.143 0.00 0.00 44.30 6.13
3522 3796 1.002773 GTTTTCTCCCTCTAACGGGCA 59.997 52.381 0.00 0.00 44.30 5.36
3523 3797 1.354101 TTTCTCCCTCTAACGGGCAA 58.646 50.000 0.00 0.00 44.30 4.52
3524 3798 0.902531 TTCTCCCTCTAACGGGCAAG 59.097 55.000 0.00 0.00 44.30 4.01
3531 4722 0.818938 TCTAACGGGCAAGTGCGATA 59.181 50.000 0.00 0.00 43.26 2.92
3538 4729 2.415357 CGGGCAAGTGCGATAAATTTGT 60.415 45.455 0.00 0.00 43.26 2.83
3539 4730 3.584834 GGGCAAGTGCGATAAATTTGTT 58.415 40.909 0.00 0.00 43.26 2.83
3540 4731 3.612423 GGGCAAGTGCGATAAATTTGTTC 59.388 43.478 0.00 0.00 43.26 3.18
3541 4732 4.233789 GGCAAGTGCGATAAATTTGTTCA 58.766 39.130 0.00 0.00 43.26 3.18
3542 4733 4.089923 GGCAAGTGCGATAAATTTGTTCAC 59.910 41.667 0.00 6.99 43.26 3.18
3543 4734 4.201391 GCAAGTGCGATAAATTTGTTCACG 60.201 41.667 0.00 0.00 0.00 4.35
3545 4736 4.708601 AGTGCGATAAATTTGTTCACGAC 58.291 39.130 0.00 0.00 0.00 4.34
3546 4737 4.451096 AGTGCGATAAATTTGTTCACGACT 59.549 37.500 0.00 0.00 0.00 4.18
3549 4740 6.793203 GTGCGATAAATTTGTTCACGACTTTA 59.207 34.615 0.00 0.00 0.00 1.85
3550 4741 7.321746 GTGCGATAAATTTGTTCACGACTTTAA 59.678 33.333 0.00 0.00 0.00 1.52
3551 4742 7.856398 TGCGATAAATTTGTTCACGACTTTAAA 59.144 29.630 0.00 0.00 0.00 1.52
3552 4743 8.683774 GCGATAAATTTGTTCACGACTTTAAAA 58.316 29.630 0.00 0.00 0.00 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.404215 TGCAGAGTAGTCGAAGCAAAC 58.596 47.619 11.34 0.00 30.34 2.93
12 13 3.369147 CCATGAGTTTTGCAGAGTAGTCG 59.631 47.826 0.00 0.00 0.00 4.18
13 14 4.569943 TCCATGAGTTTTGCAGAGTAGTC 58.430 43.478 0.00 0.00 0.00 2.59
21 22 2.555325 CAAGAGCTCCATGAGTTTTGCA 59.445 45.455 10.93 0.00 31.39 4.08
27 28 2.239150 AGCAATCAAGAGCTCCATGAGT 59.761 45.455 20.56 16.82 36.00 3.41
35 36 7.278135 TGACTTATTATGAGCAATCAAGAGCT 58.722 34.615 0.00 0.00 45.25 4.09
37 38 8.659925 ACTGACTTATTATGAGCAATCAAGAG 57.340 34.615 0.00 0.00 0.00 2.85
72 74 9.715121 ATCATGCTTCAAACAGAAAACAATAAT 57.285 25.926 0.00 0.00 35.40 1.28
75 77 6.425721 CCATCATGCTTCAAACAGAAAACAAT 59.574 34.615 0.00 0.00 35.40 2.71
76 78 5.754406 CCATCATGCTTCAAACAGAAAACAA 59.246 36.000 0.00 0.00 35.40 2.83
77 79 5.291178 CCATCATGCTTCAAACAGAAAACA 58.709 37.500 0.00 0.00 35.40 2.83
78 80 4.687483 CCCATCATGCTTCAAACAGAAAAC 59.313 41.667 0.00 0.00 35.40 2.43
79 81 4.800249 GCCCATCATGCTTCAAACAGAAAA 60.800 41.667 0.00 0.00 35.40 2.29
84 93 0.896923 GGCCCATCATGCTTCAAACA 59.103 50.000 0.00 0.00 0.00 2.83
102 111 0.960861 GGAAGAAAAGGACGGCAGGG 60.961 60.000 0.00 0.00 0.00 4.45
111 120 2.958355 TGCAAACAGGAGGAAGAAAAGG 59.042 45.455 0.00 0.00 0.00 3.11
114 123 1.956477 GCTGCAAACAGGAGGAAGAAA 59.044 47.619 0.00 0.00 44.63 2.52
132 141 0.898320 AGAGTAACGGTGATGCAGCT 59.102 50.000 2.53 0.00 0.00 4.24
144 153 1.429463 CCTGCGTCACCAAGAGTAAC 58.571 55.000 0.00 0.00 0.00 2.50
147 156 1.696097 AACCCTGCGTCACCAAGAGT 61.696 55.000 0.00 0.00 0.00 3.24
149 158 0.817634 CAAACCCTGCGTCACCAAGA 60.818 55.000 0.00 0.00 0.00 3.02
155 164 0.327924 ATCATCCAAACCCTGCGTCA 59.672 50.000 0.00 0.00 0.00 4.35
157 166 1.463674 GAATCATCCAAACCCTGCGT 58.536 50.000 0.00 0.00 0.00 5.24
195 204 6.966534 AGAAAGTCACTGTTGATCCAAATT 57.033 33.333 0.00 0.00 33.11 1.82
196 205 6.966534 AAGAAAGTCACTGTTGATCCAAAT 57.033 33.333 0.00 0.00 33.11 2.32
210 219 3.674997 GTGGATGTGGCTAAGAAAGTCA 58.325 45.455 0.00 0.00 37.53 3.41
236 248 1.962822 CGGATGATGATGCGGGGTG 60.963 63.158 0.00 0.00 39.58 4.61
237 249 2.140138 TCGGATGATGATGCGGGGT 61.140 57.895 6.19 0.00 43.18 4.95
239 251 0.321034 ATGTCGGATGATGATGCGGG 60.321 55.000 6.19 0.00 43.18 6.13
245 257 5.451937 GGTTGTAGAGAATGTCGGATGATGA 60.452 44.000 0.00 0.00 0.00 2.92
253 265 3.123621 GCTTGTGGTTGTAGAGAATGTCG 59.876 47.826 0.00 0.00 0.00 4.35
254 266 4.319177 AGCTTGTGGTTGTAGAGAATGTC 58.681 43.478 0.00 0.00 0.00 3.06
255 267 4.202357 TGAGCTTGTGGTTGTAGAGAATGT 60.202 41.667 0.00 0.00 0.00 2.71
257 269 4.623932 TGAGCTTGTGGTTGTAGAGAAT 57.376 40.909 0.00 0.00 0.00 2.40
265 277 1.334869 GTGACCTTGAGCTTGTGGTTG 59.665 52.381 6.87 0.00 32.30 3.77
266 278 1.680338 GTGACCTTGAGCTTGTGGTT 58.320 50.000 6.87 0.00 32.30 3.67
281 293 5.112686 CAAAGCTAAGATACTCAGGGTGAC 58.887 45.833 0.00 0.00 0.00 3.67
284 296 3.118223 GGCAAAGCTAAGATACTCAGGGT 60.118 47.826 0.00 0.00 0.00 4.34
291 303 1.599542 CCTGCGGCAAAGCTAAGATAC 59.400 52.381 3.44 0.00 38.13 2.24
293 305 0.749454 CCCTGCGGCAAAGCTAAGAT 60.749 55.000 3.44 0.00 38.13 2.40
299 314 1.312371 TATGAACCCTGCGGCAAAGC 61.312 55.000 3.44 0.00 37.71 3.51
301 316 1.102154 CATATGAACCCTGCGGCAAA 58.898 50.000 3.44 0.00 0.00 3.68
328 343 1.116308 TCGTCACACTGAAACTGGGA 58.884 50.000 0.00 0.00 0.00 4.37
329 344 1.202533 AGTCGTCACACTGAAACTGGG 60.203 52.381 0.00 0.00 0.00 4.45
330 345 2.225068 AGTCGTCACACTGAAACTGG 57.775 50.000 0.00 0.00 0.00 4.00
335 350 4.386867 AAGAAGAAGTCGTCACACTGAA 57.613 40.909 0.00 0.00 0.00 3.02
336 351 4.112634 CAAAGAAGAAGTCGTCACACTGA 58.887 43.478 0.00 0.00 0.00 3.41
338 353 2.866762 GCAAAGAAGAAGTCGTCACACT 59.133 45.455 0.00 0.00 0.00 3.55
342 357 1.202486 ACCGCAAAGAAGAAGTCGTCA 60.202 47.619 0.00 0.00 0.00 4.35
343 358 1.499049 ACCGCAAAGAAGAAGTCGTC 58.501 50.000 0.00 0.00 0.00 4.20
352 367 9.562583 GTTGTTATAAATGAATACCGCAAAGAA 57.437 29.630 0.00 0.00 0.00 2.52
372 387 1.210870 GAGCGGTTGTGTCGTTGTTA 58.789 50.000 0.00 0.00 0.00 2.41
381 396 0.386352 CAGCAATGTGAGCGGTTGTG 60.386 55.000 0.00 0.00 37.01 3.33
383 398 1.210931 CCAGCAATGTGAGCGGTTG 59.789 57.895 0.00 0.00 37.01 3.77
384 399 2.629656 GCCAGCAATGTGAGCGGTT 61.630 57.895 0.00 0.00 37.01 4.44
385 400 3.058160 GCCAGCAATGTGAGCGGT 61.058 61.111 0.00 0.00 37.01 5.68
386 401 3.057548 TGCCAGCAATGTGAGCGG 61.058 61.111 0.00 0.00 37.01 5.52
388 403 1.211969 CTGTGCCAGCAATGTGAGC 59.788 57.895 0.00 0.00 0.00 4.26
389 404 1.400846 GATCTGTGCCAGCAATGTGAG 59.599 52.381 0.00 0.00 0.00 3.51
390 405 1.271488 TGATCTGTGCCAGCAATGTGA 60.271 47.619 0.00 0.00 0.00 3.58
392 407 2.022195 GATGATCTGTGCCAGCAATGT 58.978 47.619 0.00 0.00 0.00 2.71
395 410 1.680860 CCTGATGATCTGTGCCAGCAA 60.681 52.381 0.00 0.00 0.00 3.91
397 412 1.445716 GCCTGATGATCTGTGCCAGC 61.446 60.000 0.00 0.00 0.00 4.85
398 413 1.158484 CGCCTGATGATCTGTGCCAG 61.158 60.000 0.00 0.00 0.00 4.85
401 416 0.935898 CTTCGCCTGATGATCTGTGC 59.064 55.000 0.00 0.00 0.00 4.57
407 422 2.045524 AGATCACCTTCGCCTGATGAT 58.954 47.619 0.00 0.00 32.74 2.45
411 426 0.904865 ACCAGATCACCTTCGCCTGA 60.905 55.000 0.00 0.00 0.00 3.86
418 442 2.777536 TGGCAGACCAGATCACCTT 58.222 52.632 0.00 0.00 42.67 3.50
447 471 2.618816 GGTGGCATTCTCATGAACAGGA 60.619 50.000 0.00 0.00 34.71 3.86
454 478 2.022195 CTCAAGGGTGGCATTCTCATG 58.978 52.381 0.00 0.00 0.00 3.07
455 479 1.637553 ACTCAAGGGTGGCATTCTCAT 59.362 47.619 0.00 0.00 0.00 2.90
456 480 1.067295 ACTCAAGGGTGGCATTCTCA 58.933 50.000 0.00 0.00 0.00 3.27
525 549 1.268539 CCGAAGTTGTTGCTTGACCAC 60.269 52.381 0.00 0.00 0.00 4.16
539 563 2.885861 CTACAGAGCGGCCGAAGT 59.114 61.111 33.48 22.05 0.00 3.01
549 573 2.391616 TCAACATGCCTGCTACAGAG 57.608 50.000 0.00 0.00 32.44 3.35
575 599 1.039068 CAACACCAGATTGCCAACCA 58.961 50.000 0.00 0.00 0.00 3.67
596 620 0.822811 AGCTGCATCTGTCTGATCGT 59.177 50.000 1.02 0.00 32.05 3.73
605 629 1.923227 CTGCCACACAGCTGCATCTG 61.923 60.000 15.27 15.82 40.19 2.90
607 631 2.875485 CTGCCACACAGCTGCATC 59.125 61.111 15.27 0.00 40.19 3.91
654 678 1.922447 TCCATAAGTGATTGCCCAGGT 59.078 47.619 0.00 0.00 0.00 4.00
663 687 4.910304 AGCCTCATACCTTCCATAAGTGAT 59.090 41.667 0.00 0.00 0.00 3.06
670 694 4.079787 TGCTTTAAGCCTCATACCTTCCAT 60.080 41.667 14.80 0.00 41.51 3.41
687 711 4.079980 TGTTGCAGAGGTACTTGCTTTA 57.920 40.909 15.09 3.27 41.55 1.85
739 766 6.042638 AGCATATAACGCATCTTGGAGTAT 57.957 37.500 0.89 0.00 0.00 2.12
746 773 6.851609 TCAACAAAAGCATATAACGCATCTT 58.148 32.000 0.89 0.00 0.00 2.40
752 779 7.008266 GTGTGGATTCAACAAAAGCATATAACG 59.992 37.037 0.00 0.00 0.00 3.18
764 791 1.680735 GTGCTGGTGTGGATTCAACAA 59.319 47.619 0.00 0.00 34.49 2.83
781 808 2.224450 ACCAACTGTAGTAGGGTTGTGC 60.224 50.000 11.71 0.00 38.74 4.57
807 834 0.111639 TCTTGTTGTTGTAGGCCCCC 59.888 55.000 0.00 0.00 0.00 5.40
833 885 3.953612 GCCTCCATTCATGAATGTAACCA 59.046 43.478 35.01 18.61 44.97 3.67
853 905 0.808847 GACCCATAAACGACGAGGCC 60.809 60.000 0.00 0.00 0.00 5.19
859 911 4.626604 TGTATTTGACGACCCATAAACGAC 59.373 41.667 0.00 0.00 0.00 4.34
866 921 6.928348 TCCTATATGTATTTGACGACCCAT 57.072 37.500 0.00 0.00 0.00 4.00
886 941 6.253946 AGCTACTGGCAGTAATAAAATCCT 57.746 37.500 26.12 10.57 44.79 3.24
1029 1138 1.299468 GCCATACTCTCCGCAGACG 60.299 63.158 0.00 0.00 39.67 4.18
1071 1180 6.226787 ACTAGAATTGTTCTGAAGTGGACAG 58.773 40.000 0.00 0.00 40.94 3.51
1098 1207 1.550524 TCCACTGGCTTGTAGTAGCTG 59.449 52.381 0.00 0.00 40.99 4.24
1106 1218 1.376424 CGCTCATCCACTGGCTTGT 60.376 57.895 0.00 0.00 0.00 3.16
1168 1280 7.301068 AGAGTCGATGATGTTGAATTTCTTC 57.699 36.000 0.00 0.00 0.00 2.87
1195 1307 8.758633 TCAAAGTAAGAAGTATCTGTAAGTGC 57.241 34.615 0.00 0.00 35.59 4.40
1208 1320 6.317789 TGTGCCTTTCATCAAAGTAAGAAG 57.682 37.500 0.00 0.00 37.87 2.85
1240 1367 7.518161 TGCTTACAGTCATCTTCGTTTAAATG 58.482 34.615 0.63 0.63 0.00 2.32
1301 1431 2.012673 CCAACTGGTCATAGCTGAAGC 58.987 52.381 0.00 0.00 42.49 3.86
1325 1455 4.752063 TGCCATCCAGGTACATCTACTAT 58.248 43.478 0.00 0.00 40.61 2.12
1422 1561 2.370189 AGTAGATGCAGTAATGGAGGGC 59.630 50.000 0.00 0.00 0.00 5.19
1474 1658 4.752146 AGAATAGCAAAAGCTCCAAATGC 58.248 39.130 0.00 0.00 37.28 3.56
1486 1670 7.213216 TCACAAGCAATACAAGAATAGCAAA 57.787 32.000 0.00 0.00 0.00 3.68
1509 1693 6.561614 TCGTAGATAAAGAGTGACACCAATC 58.438 40.000 0.84 0.00 37.64 2.67
1514 1698 5.564048 ACCTCGTAGATAAAGAGTGACAC 57.436 43.478 0.00 0.00 33.89 3.67
1534 1718 5.934402 TTGTCTCCATACTTCCTTCTACC 57.066 43.478 0.00 0.00 0.00 3.18
1536 1720 7.619698 TCATCTTTGTCTCCATACTTCCTTCTA 59.380 37.037 0.00 0.00 0.00 2.10
1625 1809 2.029838 ACCGAATCCTTCAGTGCATC 57.970 50.000 0.00 0.00 0.00 3.91
1686 1870 6.868339 CCGCAATTCTTTCTTCACCTAATTTT 59.132 34.615 0.00 0.00 0.00 1.82
1741 1925 3.244387 ACCTCTGCCAAGAACTCTTTCTC 60.244 47.826 0.00 0.00 41.56 2.87
1903 2087 3.367395 CGAGTGCACCAATCAAGAGAGTA 60.367 47.826 14.63 0.00 0.00 2.59
1931 2115 7.248743 CCCTTGGCAATATCCAATATGATTT 57.751 36.000 0.00 0.00 44.39 2.17
2175 2360 4.331717 ACAACAACTCCAAAACTGTAGACG 59.668 41.667 0.00 0.00 0.00 4.18
2184 2369 4.531854 TCTCCATGACAACAACTCCAAAA 58.468 39.130 0.00 0.00 0.00 2.44
2247 2432 6.428385 AAATTTATGAGCTGAACTTCCTCG 57.572 37.500 0.00 0.00 0.00 4.63
2341 2526 2.525368 TCGAATCACTTCCTCCTGACA 58.475 47.619 0.00 0.00 0.00 3.58
2412 2597 4.263639 ACCTTGATCACTGTTGACATGGAT 60.264 41.667 0.00 3.08 34.81 3.41
2447 2632 7.223584 TCCATCAAAAGTTTCTACACTCATCA 58.776 34.615 0.00 0.00 0.00 3.07
2482 2685 8.637099 TGTTGATGGATTATCTTGAACAAACAA 58.363 29.630 0.00 0.00 36.71 2.83
2509 2712 4.036498 GGATGCTTGAGATGGAACTGAATG 59.964 45.833 0.00 0.00 0.00 2.67
2552 2755 6.431198 TTTTTGAAGCTAGTCACTCGTTTT 57.569 33.333 0.00 0.00 0.00 2.43
2558 2761 9.736023 CAAGTTAAATTTTTGAAGCTAGTCACT 57.264 29.630 0.00 0.00 0.00 3.41
2594 2811 9.696917 AGTACAAATAGAAAAAGATGCAAAAGG 57.303 29.630 0.00 0.00 0.00 3.11
2610 2835 9.840427 CCAAACATACTTCCAAAGTACAAATAG 57.160 33.333 1.85 0.00 45.99 1.73
2660 2885 4.637534 GGACAATCAAGCACACATATCTGT 59.362 41.667 0.00 0.00 35.44 3.41
2663 2888 4.036027 CCTGGACAATCAAGCACACATATC 59.964 45.833 0.00 0.00 0.00 1.63
2686 2912 4.439057 TGAGTCGGCAATACAATACTTCC 58.561 43.478 0.00 0.00 0.00 3.46
2694 2920 5.079689 TGAAAGTATGAGTCGGCAATACA 57.920 39.130 13.34 0.00 0.00 2.29
2695 2921 5.643339 CTGAAAGTATGAGTCGGCAATAC 57.357 43.478 5.08 5.08 0.00 1.89
2712 2938 5.610398 ACATCACATGTGTCACTACTGAAA 58.390 37.500 24.63 1.81 43.01 2.69
2715 2941 5.006068 GCATACATCACATGTGTCACTACTG 59.994 44.000 24.63 14.87 44.60 2.74
2718 2944 4.081198 TGGCATACATCACATGTGTCACTA 60.081 41.667 24.63 6.18 44.60 2.74
2719 2945 3.273434 GGCATACATCACATGTGTCACT 58.727 45.455 24.63 9.08 44.60 3.41
2720 2946 3.009026 TGGCATACATCACATGTGTCAC 58.991 45.455 24.63 8.97 44.60 3.67
2742 2984 5.128827 TCGGACCATCTGCTAGTATCTTTTT 59.871 40.000 0.00 0.00 0.00 1.94
2752 2994 1.757118 CTTCCTTCGGACCATCTGCTA 59.243 52.381 0.00 0.00 0.00 3.49
2755 3001 2.028112 TGTTCTTCCTTCGGACCATCTG 60.028 50.000 0.00 0.00 0.00 2.90
2763 3009 4.253685 TCTAAGCATTGTTCTTCCTTCGG 58.746 43.478 0.00 0.00 0.00 4.30
2764 3010 4.331168 CCTCTAAGCATTGTTCTTCCTTCG 59.669 45.833 0.00 0.00 0.00 3.79
2773 3019 3.430098 CGCTCTCTCCTCTAAGCATTGTT 60.430 47.826 0.00 0.00 34.39 2.83
2775 3021 2.741612 CGCTCTCTCCTCTAAGCATTG 58.258 52.381 0.00 0.00 34.39 2.82
2848 3094 6.012337 ACATGGTGTTGGATATGTGGATAA 57.988 37.500 0.00 0.00 32.90 1.75
2849 3095 5.645056 ACATGGTGTTGGATATGTGGATA 57.355 39.130 0.00 0.00 32.90 2.59
2868 3114 5.594317 GGTAAGATTAATGCTGGACCAACAT 59.406 40.000 4.45 4.45 0.00 2.71
2874 3120 4.816925 GGACAGGTAAGATTAATGCTGGAC 59.183 45.833 0.00 0.00 0.00 4.02
2881 3127 7.348274 TCTCATCTTGGGACAGGTAAGATTAAT 59.652 37.037 0.00 0.00 42.39 1.40
2884 3130 5.032846 TCTCATCTTGGGACAGGTAAGATT 58.967 41.667 0.00 0.00 42.39 2.40
2902 3148 3.152341 CAAGAAAAGCCACCTGTCTCAT 58.848 45.455 0.00 0.00 0.00 2.90
2912 3158 7.444299 AGAAAAATCTATTGCAAGAAAAGCCA 58.556 30.769 4.94 0.00 0.00 4.75
2914 3160 9.201127 AGAAGAAAAATCTATTGCAAGAAAAGC 57.799 29.630 4.94 0.00 0.00 3.51
2930 3176 9.624697 GCCTTTTTCAAAACAAAGAAGAAAAAT 57.375 25.926 10.58 0.00 43.20 1.82
2932 3178 8.159344 TGCCTTTTTCAAAACAAAGAAGAAAA 57.841 26.923 0.00 0.00 36.67 2.29
2933 3179 7.094848 CCTGCCTTTTTCAAAACAAAGAAGAAA 60.095 33.333 0.00 0.00 32.56 2.52
2934 3180 6.371271 CCTGCCTTTTTCAAAACAAAGAAGAA 59.629 34.615 0.00 0.00 32.56 2.52
2935 3181 5.874261 CCTGCCTTTTTCAAAACAAAGAAGA 59.126 36.000 0.00 0.00 32.56 2.87
2936 3182 5.447683 GCCTGCCTTTTTCAAAACAAAGAAG 60.448 40.000 0.00 0.00 32.56 2.85
2937 3183 4.394610 GCCTGCCTTTTTCAAAACAAAGAA 59.605 37.500 0.00 0.00 32.56 2.52
2938 3184 3.938334 GCCTGCCTTTTTCAAAACAAAGA 59.062 39.130 0.00 0.00 32.56 2.52
2939 3185 3.940852 AGCCTGCCTTTTTCAAAACAAAG 59.059 39.130 0.00 0.00 0.00 2.77
2940 3186 3.949132 AGCCTGCCTTTTTCAAAACAAA 58.051 36.364 0.00 0.00 0.00 2.83
2941 3187 3.625649 AGCCTGCCTTTTTCAAAACAA 57.374 38.095 0.00 0.00 0.00 2.83
2942 3188 3.269178 CAAGCCTGCCTTTTTCAAAACA 58.731 40.909 0.00 0.00 0.00 2.83
2943 3189 3.270027 ACAAGCCTGCCTTTTTCAAAAC 58.730 40.909 0.00 0.00 0.00 2.43
2944 3190 3.197549 AGACAAGCCTGCCTTTTTCAAAA 59.802 39.130 0.00 0.00 0.00 2.44
2945 3191 2.765699 AGACAAGCCTGCCTTTTTCAAA 59.234 40.909 0.00 0.00 0.00 2.69
2946 3192 2.387757 AGACAAGCCTGCCTTTTTCAA 58.612 42.857 0.00 0.00 0.00 2.69
2947 3193 2.071778 AGACAAGCCTGCCTTTTTCA 57.928 45.000 0.00 0.00 0.00 2.69
2948 3194 3.317993 TGTAAGACAAGCCTGCCTTTTTC 59.682 43.478 0.00 0.00 0.00 2.29
2949 3195 3.295973 TGTAAGACAAGCCTGCCTTTTT 58.704 40.909 0.00 0.00 0.00 1.94
2950 3196 2.944129 TGTAAGACAAGCCTGCCTTTT 58.056 42.857 0.00 0.00 0.00 2.27
2951 3197 2.656947 TGTAAGACAAGCCTGCCTTT 57.343 45.000 0.00 0.00 0.00 3.11
2952 3198 2.440409 CATGTAAGACAAGCCTGCCTT 58.560 47.619 0.00 0.00 0.00 4.35
2953 3199 1.340405 CCATGTAAGACAAGCCTGCCT 60.340 52.381 0.00 0.00 0.00 4.75
2954 3200 1.098050 CCATGTAAGACAAGCCTGCC 58.902 55.000 0.00 0.00 0.00 4.85
2955 3201 2.113860 TCCATGTAAGACAAGCCTGC 57.886 50.000 0.00 0.00 0.00 4.85
2956 3202 4.334759 CAGAATCCATGTAAGACAAGCCTG 59.665 45.833 0.00 0.00 0.00 4.85
2957 3203 4.521146 CAGAATCCATGTAAGACAAGCCT 58.479 43.478 0.00 0.00 0.00 4.58
2958 3204 3.065925 GCAGAATCCATGTAAGACAAGCC 59.934 47.826 0.00 0.00 0.00 4.35
2959 3205 3.242543 CGCAGAATCCATGTAAGACAAGC 60.243 47.826 0.00 0.00 0.00 4.01
2960 3206 3.935203 ACGCAGAATCCATGTAAGACAAG 59.065 43.478 0.00 0.00 0.00 3.16
2961 3207 3.932710 GACGCAGAATCCATGTAAGACAA 59.067 43.478 0.00 0.00 0.00 3.18
2966 3212 1.837439 AGGGACGCAGAATCCATGTAA 59.163 47.619 0.00 0.00 38.06 2.41
2967 3213 1.412710 GAGGGACGCAGAATCCATGTA 59.587 52.381 0.00 0.00 38.06 2.29
2977 3223 2.035632 AGAAATAGGAGAGGGACGCAG 58.964 52.381 0.00 0.00 0.00 5.18
2978 3224 2.160721 AGAAATAGGAGAGGGACGCA 57.839 50.000 0.00 0.00 0.00 5.24
2979 3225 2.957006 TGTAGAAATAGGAGAGGGACGC 59.043 50.000 0.00 0.00 0.00 5.19
2980 3226 4.208746 AGTGTAGAAATAGGAGAGGGACG 58.791 47.826 0.00 0.00 0.00 4.79
2981 3227 5.657302 TCAAGTGTAGAAATAGGAGAGGGAC 59.343 44.000 0.00 0.00 0.00 4.46
2982 3228 5.838955 TCAAGTGTAGAAATAGGAGAGGGA 58.161 41.667 0.00 0.00 0.00 4.20
3001 3247 9.674824 GGCTGAATATGTTTGAAATATCTCAAG 57.325 33.333 0.00 0.00 36.69 3.02
3002 3248 9.187996 TGGCTGAATATGTTTGAAATATCTCAA 57.812 29.630 0.00 0.00 33.48 3.02
3003 3249 8.750515 TGGCTGAATATGTTTGAAATATCTCA 57.249 30.769 0.00 0.00 0.00 3.27
3022 3268 9.571816 TCACACATAATCAAATATAATGGCTGA 57.428 29.630 0.00 0.00 0.00 4.26
3023 3269 9.616634 GTCACACATAATCAAATATAATGGCTG 57.383 33.333 0.00 0.00 0.00 4.85
3024 3270 9.353431 TGTCACACATAATCAAATATAATGGCT 57.647 29.630 0.00 0.00 0.00 4.75
3033 3279 7.936496 TGTATGGTGTCACACATAATCAAAT 57.064 32.000 10.85 0.00 35.86 2.32
3041 3287 6.539826 CAGATGTATTGTATGGTGTCACACAT 59.460 38.462 10.85 8.47 35.86 3.21
3042 3288 5.874261 CAGATGTATTGTATGGTGTCACACA 59.126 40.000 10.85 0.98 35.86 3.72
3058 3304 9.561069 GTTATGTATTTCCACCTTCAGATGTAT 57.439 33.333 0.00 0.00 0.00 2.29
3061 3307 7.864108 TGTTATGTATTTCCACCTTCAGATG 57.136 36.000 0.00 0.00 0.00 2.90
3062 3308 9.479549 AAATGTTATGTATTTCCACCTTCAGAT 57.520 29.630 0.00 0.00 0.00 2.90
3063 3309 8.739039 CAAATGTTATGTATTTCCACCTTCAGA 58.261 33.333 0.00 0.00 0.00 3.27
3064 3310 8.522830 ACAAATGTTATGTATTTCCACCTTCAG 58.477 33.333 0.00 0.00 0.00 3.02
3065 3311 8.415950 ACAAATGTTATGTATTTCCACCTTCA 57.584 30.769 0.00 0.00 0.00 3.02
3066 3312 9.705290 AAACAAATGTTATGTATTTCCACCTTC 57.295 29.630 0.00 0.00 37.25 3.46
3068 3314 9.705290 GAAAACAAATGTTATGTATTTCCACCT 57.295 29.630 0.00 0.00 37.25 4.00
3069 3315 9.705290 AGAAAACAAATGTTATGTATTTCCACC 57.295 29.630 0.00 0.00 37.25 4.61
3096 3342 8.013378 CGTCAACTATTTTCAGTTCCGTTTTAT 58.987 33.333 0.00 0.00 36.61 1.40
3098 3344 6.183360 ACGTCAACTATTTTCAGTTCCGTTTT 60.183 34.615 5.07 0.00 38.77 2.43
3099 3345 5.295045 ACGTCAACTATTTTCAGTTCCGTTT 59.705 36.000 5.07 0.00 38.77 3.60
3101 3347 4.374399 ACGTCAACTATTTTCAGTTCCGT 58.626 39.130 5.07 5.07 36.61 4.69
3102 3348 4.985044 ACGTCAACTATTTTCAGTTCCG 57.015 40.909 0.00 0.00 36.61 4.30
3103 3349 7.858583 ACTAAACGTCAACTATTTTCAGTTCC 58.141 34.615 0.00 0.00 36.61 3.62
3106 3352 8.985805 CCTAACTAAACGTCAACTATTTTCAGT 58.014 33.333 0.00 0.00 0.00 3.41
3107 3353 8.985805 ACCTAACTAAACGTCAACTATTTTCAG 58.014 33.333 0.00 0.00 0.00 3.02
3109 3355 7.743400 GCACCTAACTAAACGTCAACTATTTTC 59.257 37.037 0.00 0.00 0.00 2.29
3117 3371 4.444536 ACTTGCACCTAACTAAACGTCAA 58.555 39.130 0.00 0.00 0.00 3.18
3122 3376 6.260271 AGTTTCAGACTTGCACCTAACTAAAC 59.740 38.462 0.00 0.00 33.92 2.01
3132 3386 2.219674 CAGTCGAGTTTCAGACTTGCAC 59.780 50.000 0.00 0.00 44.46 4.57
3135 3389 3.371102 TCCAGTCGAGTTTCAGACTTG 57.629 47.619 0.00 0.00 44.46 3.16
3138 3392 3.914312 TCATTCCAGTCGAGTTTCAGAC 58.086 45.455 0.00 0.00 37.63 3.51
3140 3394 4.752101 ACTTTCATTCCAGTCGAGTTTCAG 59.248 41.667 0.00 0.00 0.00 3.02
3142 3396 5.674933 AACTTTCATTCCAGTCGAGTTTC 57.325 39.130 0.00 0.00 0.00 2.78
3178 3439 9.748708 CCTTGAATTCAGTTTGATTTAACAGAA 57.251 29.630 8.41 0.00 37.74 3.02
3179 3440 8.912988 ACCTTGAATTCAGTTTGATTTAACAGA 58.087 29.630 8.41 0.00 0.00 3.41
3188 3449 6.601332 ACCTTCTACCTTGAATTCAGTTTGA 58.399 36.000 8.41 4.21 0.00 2.69
3190 3451 7.898014 AAACCTTCTACCTTGAATTCAGTTT 57.102 32.000 8.41 9.11 0.00 2.66
3192 3453 7.290813 AGAAAACCTTCTACCTTGAATTCAGT 58.709 34.615 8.41 6.90 40.26 3.41
3194 3455 7.777910 TCAAGAAAACCTTCTACCTTGAATTCA 59.222 33.333 3.38 3.38 41.23 2.57
3199 3460 6.601332 ACATCAAGAAAACCTTCTACCTTGA 58.399 36.000 0.00 0.00 41.23 3.02
3200 3461 6.884280 ACATCAAGAAAACCTTCTACCTTG 57.116 37.500 0.00 0.00 41.23 3.61
3201 3462 7.290813 AGAACATCAAGAAAACCTTCTACCTT 58.709 34.615 0.00 0.00 41.23 3.50
3206 3467 6.238869 GCAGAAGAACATCAAGAAAACCTTCT 60.239 38.462 0.00 0.00 44.11 2.85
3208 3469 5.360714 TGCAGAAGAACATCAAGAAAACCTT 59.639 36.000 0.00 0.00 34.91 3.50
3212 3473 5.068198 AGCTTGCAGAAGAACATCAAGAAAA 59.932 36.000 4.67 0.00 37.03 2.29
3218 3479 4.006780 TGTAGCTTGCAGAAGAACATCA 57.993 40.909 0.00 0.00 0.00 3.07
3219 3480 4.453819 AGTTGTAGCTTGCAGAAGAACATC 59.546 41.667 0.00 0.00 30.84 3.06
3235 3496 7.382218 TGCACATCAATATATCGTGAGTTGTAG 59.618 37.037 8.09 0.90 0.00 2.74
3237 3498 6.048509 TGCACATCAATATATCGTGAGTTGT 58.951 36.000 8.09 0.48 0.00 3.32
3246 3507 8.146479 TGACTTCACTTGCACATCAATATATC 57.854 34.615 0.00 0.00 33.57 1.63
3249 3510 6.376299 ACATGACTTCACTTGCACATCAATAT 59.624 34.615 0.00 0.00 33.57 1.28
3252 3513 3.884693 ACATGACTTCACTTGCACATCAA 59.115 39.130 0.00 0.00 0.00 2.57
3256 3517 2.642427 ACACATGACTTCACTTGCACA 58.358 42.857 0.00 0.00 0.00 4.57
3257 3518 3.809832 ACTACACATGACTTCACTTGCAC 59.190 43.478 0.00 0.00 0.00 4.57
3258 3519 4.058124 GACTACACATGACTTCACTTGCA 58.942 43.478 0.00 0.00 0.00 4.08
3259 3520 4.310769 AGACTACACATGACTTCACTTGC 58.689 43.478 0.00 0.00 0.00 4.01
3279 3540 9.243637 GCTTGTGTGTGTCAAATATTTAAAAGA 57.756 29.630 0.00 0.00 0.00 2.52
3280 3541 9.248291 AGCTTGTGTGTGTCAAATATTTAAAAG 57.752 29.630 0.00 0.00 0.00 2.27
3282 3543 9.243637 GAAGCTTGTGTGTGTCAAATATTTAAA 57.756 29.630 2.10 0.00 0.00 1.52
3284 3545 7.935520 TGAAGCTTGTGTGTGTCAAATATTTA 58.064 30.769 2.10 0.00 0.00 1.40
3285 3546 6.804677 TGAAGCTTGTGTGTGTCAAATATTT 58.195 32.000 2.10 0.00 0.00 1.40
3294 3566 3.543680 AGTACTGAAGCTTGTGTGTGT 57.456 42.857 2.10 0.00 0.00 3.72
3296 3568 3.877508 GGAAAGTACTGAAGCTTGTGTGT 59.122 43.478 2.10 0.00 0.00 3.72
3297 3569 3.876914 TGGAAAGTACTGAAGCTTGTGTG 59.123 43.478 2.10 0.00 0.00 3.82
3299 3571 4.024556 CACTGGAAAGTACTGAAGCTTGTG 60.025 45.833 2.10 0.00 0.00 3.33
3303 3575 4.589374 AGTACACTGGAAAGTACTGAAGCT 59.411 41.667 0.00 0.00 46.60 3.74
3312 3584 5.995897 GGTATTTGTCAGTACACTGGAAAGT 59.004 40.000 9.41 4.46 43.91 2.66
3320 3592 6.422776 CCTTCATGGTATTTGTCAGTACAC 57.577 41.667 0.00 0.00 34.61 2.90
3345 3619 4.977963 CCACTTGTAAACTGAATTGCACAG 59.022 41.667 1.47 1.47 40.68 3.66
3347 3621 3.735746 GCCACTTGTAAACTGAATTGCAC 59.264 43.478 0.00 0.00 0.00 4.57
3354 3628 2.571212 CCAGTGCCACTTGTAAACTGA 58.429 47.619 0.00 0.00 40.54 3.41
3355 3629 1.001378 GCCAGTGCCACTTGTAAACTG 60.001 52.381 0.00 0.00 38.36 3.16
3357 3631 0.040425 CGCCAGTGCCACTTGTAAAC 60.040 55.000 0.00 0.00 0.00 2.01
3358 3632 1.169661 CCGCCAGTGCCACTTGTAAA 61.170 55.000 0.00 0.00 0.00 2.01
3364 3638 4.320456 CAGACCGCCAGTGCCACT 62.320 66.667 0.00 0.00 0.00 4.00
3366 3640 4.007644 CTCAGACCGCCAGTGCCA 62.008 66.667 0.00 0.00 0.00 4.92
3369 3643 0.034059 AAGTTCTCAGACCGCCAGTG 59.966 55.000 0.00 0.00 0.00 3.66
3370 3644 1.272769 GTAAGTTCTCAGACCGCCAGT 59.727 52.381 0.00 0.00 0.00 4.00
3371 3645 1.732732 CGTAAGTTCTCAGACCGCCAG 60.733 57.143 0.00 0.00 0.00 4.85
3372 3646 0.242825 CGTAAGTTCTCAGACCGCCA 59.757 55.000 0.00 0.00 0.00 5.69
3373 3647 1.077089 GCGTAAGTTCTCAGACCGCC 61.077 60.000 0.00 0.00 41.68 6.13
3374 3648 0.109226 AGCGTAAGTTCTCAGACCGC 60.109 55.000 0.00 0.00 39.91 5.68
3375 3649 1.618861 CAGCGTAAGTTCTCAGACCG 58.381 55.000 0.00 0.00 41.68 4.79
3376 3650 1.351153 GCAGCGTAAGTTCTCAGACC 58.649 55.000 0.00 0.00 41.68 3.85
3377 3651 0.985549 CGCAGCGTAAGTTCTCAGAC 59.014 55.000 6.65 0.00 41.68 3.51
3378 3652 0.109272 CCGCAGCGTAAGTTCTCAGA 60.109 55.000 15.05 0.00 41.68 3.27
3379 3653 1.078759 CCCGCAGCGTAAGTTCTCAG 61.079 60.000 15.05 0.00 41.68 3.35
3380 3654 1.080093 CCCGCAGCGTAAGTTCTCA 60.080 57.895 15.05 0.00 41.68 3.27
3381 3655 1.080025 ACCCGCAGCGTAAGTTCTC 60.080 57.895 15.05 0.00 41.68 2.87
3383 3657 3.023591 GCACCCGCAGCGTAAGTTC 62.024 63.158 15.05 0.00 38.36 3.01
3384 3658 3.047877 GCACCCGCAGCGTAAGTT 61.048 61.111 15.05 0.00 38.36 2.66
3385 3659 4.308458 TGCACCCGCAGCGTAAGT 62.308 61.111 15.05 5.25 45.36 2.24
3394 3668 2.046285 ATGGCTTAAGTGCACCCGC 61.046 57.895 14.63 10.78 39.24 6.13
3395 3669 0.676466 TCATGGCTTAAGTGCACCCG 60.676 55.000 14.63 0.26 34.04 5.28
3396 3670 1.767759 ATCATGGCTTAAGTGCACCC 58.232 50.000 14.63 7.74 34.04 4.61
3397 3671 3.545703 AGTATCATGGCTTAAGTGCACC 58.454 45.455 14.63 0.00 34.04 5.01
3398 3672 4.731773 GCAAGTATCATGGCTTAAGTGCAC 60.732 45.833 9.40 9.40 34.04 4.57
3399 3673 3.378112 GCAAGTATCATGGCTTAAGTGCA 59.622 43.478 4.02 0.00 34.04 4.57
3400 3674 3.378112 TGCAAGTATCATGGCTTAAGTGC 59.622 43.478 4.02 2.62 0.00 4.40
3401 3675 5.565592 TTGCAAGTATCATGGCTTAAGTG 57.434 39.130 4.02 0.00 0.00 3.16
3402 3676 5.105756 GGTTTGCAAGTATCATGGCTTAAGT 60.106 40.000 4.02 0.00 0.00 2.24
3403 3677 5.343249 GGTTTGCAAGTATCATGGCTTAAG 58.657 41.667 0.00 0.00 0.00 1.85
3405 3679 3.376859 CGGTTTGCAAGTATCATGGCTTA 59.623 43.478 0.00 0.00 0.00 3.09
3407 3681 1.745087 CGGTTTGCAAGTATCATGGCT 59.255 47.619 0.00 0.00 0.00 4.75
3408 3682 1.202290 CCGGTTTGCAAGTATCATGGC 60.202 52.381 0.00 0.00 0.00 4.40
3409 3683 2.364632 TCCGGTTTGCAAGTATCATGG 58.635 47.619 0.00 0.00 0.00 3.66
3410 3684 4.433186 TTTCCGGTTTGCAAGTATCATG 57.567 40.909 0.00 0.00 0.00 3.07
3411 3685 5.227152 GTTTTTCCGGTTTGCAAGTATCAT 58.773 37.500 0.00 0.00 0.00 2.45
3412 3686 4.500035 GGTTTTTCCGGTTTGCAAGTATCA 60.500 41.667 0.00 0.00 0.00 2.15
3413 3687 3.985279 GGTTTTTCCGGTTTGCAAGTATC 59.015 43.478 0.00 0.00 0.00 2.24
3414 3688 3.243941 GGGTTTTTCCGGTTTGCAAGTAT 60.244 43.478 0.00 0.00 37.00 2.12
3415 3689 2.101082 GGGTTTTTCCGGTTTGCAAGTA 59.899 45.455 0.00 0.00 37.00 2.24
3417 3691 1.577468 GGGTTTTTCCGGTTTGCAAG 58.423 50.000 0.00 0.00 37.00 4.01
3418 3692 0.179108 CGGGTTTTTCCGGTTTGCAA 60.179 50.000 0.00 0.00 45.78 4.08
3419 3693 1.437986 CGGGTTTTTCCGGTTTGCA 59.562 52.632 0.00 0.00 45.78 4.08
3427 3701 4.517832 ACAAGTTCTATGACGGGTTTTTCC 59.482 41.667 0.00 0.00 0.00 3.13
3428 3702 5.684550 ACAAGTTCTATGACGGGTTTTTC 57.315 39.130 0.00 0.00 0.00 2.29
3429 3703 7.754851 AATACAAGTTCTATGACGGGTTTTT 57.245 32.000 0.00 0.00 0.00 1.94
3430 3704 7.879160 TGTAATACAAGTTCTATGACGGGTTTT 59.121 33.333 0.00 0.00 0.00 2.43
3432 3706 6.938507 TGTAATACAAGTTCTATGACGGGTT 58.061 36.000 0.00 0.00 0.00 4.11
3433 3707 6.406624 CCTGTAATACAAGTTCTATGACGGGT 60.407 42.308 5.64 0.00 30.64 5.28
3434 3708 5.983720 CCTGTAATACAAGTTCTATGACGGG 59.016 44.000 0.37 0.37 28.70 5.28
3435 3709 6.475727 CACCTGTAATACAAGTTCTATGACGG 59.524 42.308 0.00 0.00 0.00 4.79
3436 3710 6.019801 GCACCTGTAATACAAGTTCTATGACG 60.020 42.308 0.00 0.00 0.00 4.35
3437 3711 6.816640 TGCACCTGTAATACAAGTTCTATGAC 59.183 38.462 0.00 0.00 0.00 3.06
3438 3712 6.941857 TGCACCTGTAATACAAGTTCTATGA 58.058 36.000 0.00 0.00 0.00 2.15
3439 3713 7.041721 TCTGCACCTGTAATACAAGTTCTATG 58.958 38.462 0.00 0.00 0.00 2.23
3442 3716 5.483685 TCTGCACCTGTAATACAAGTTCT 57.516 39.130 0.00 0.00 0.00 3.01
3443 3717 6.480320 CCTATCTGCACCTGTAATACAAGTTC 59.520 42.308 0.00 0.00 0.00 3.01
3444 3718 6.070194 ACCTATCTGCACCTGTAATACAAGTT 60.070 38.462 0.00 0.00 0.00 2.66
3446 3720 5.918608 ACCTATCTGCACCTGTAATACAAG 58.081 41.667 0.00 0.00 0.00 3.16
3448 3722 4.959839 TGACCTATCTGCACCTGTAATACA 59.040 41.667 0.00 0.00 0.00 2.29
3449 3723 5.163447 TGTGACCTATCTGCACCTGTAATAC 60.163 44.000 0.00 0.00 0.00 1.89
3450 3724 4.959839 TGTGACCTATCTGCACCTGTAATA 59.040 41.667 0.00 0.00 0.00 0.98
3452 3726 3.056107 GTGTGACCTATCTGCACCTGTAA 60.056 47.826 0.00 0.00 0.00 2.41
3453 3727 2.496070 GTGTGACCTATCTGCACCTGTA 59.504 50.000 0.00 0.00 0.00 2.74
3454 3728 1.276421 GTGTGACCTATCTGCACCTGT 59.724 52.381 0.00 0.00 0.00 4.00
3457 3731 1.406069 CCTGTGTGACCTATCTGCACC 60.406 57.143 0.00 0.00 33.43 5.01
3458 3732 1.276421 ACCTGTGTGACCTATCTGCAC 59.724 52.381 0.00 0.00 34.32 4.57
3459 3733 1.644509 ACCTGTGTGACCTATCTGCA 58.355 50.000 0.00 0.00 0.00 4.41
3460 3734 2.770164 AACCTGTGTGACCTATCTGC 57.230 50.000 0.00 0.00 0.00 4.26
3461 3735 5.360999 TCAGATAACCTGTGTGACCTATCTG 59.639 44.000 9.58 9.58 43.38 2.90
3462 3736 5.519808 TCAGATAACCTGTGTGACCTATCT 58.480 41.667 0.00 0.00 43.38 1.98
3463 3737 5.854010 TCAGATAACCTGTGTGACCTATC 57.146 43.478 0.00 0.00 43.38 2.08
3464 3738 5.104900 GGTTCAGATAACCTGTGTGACCTAT 60.105 44.000 0.00 0.00 43.38 2.57
3465 3739 4.222145 GGTTCAGATAACCTGTGTGACCTA 59.778 45.833 0.00 0.00 43.38 3.08
3466 3740 3.008049 GGTTCAGATAACCTGTGTGACCT 59.992 47.826 0.00 0.00 43.38 3.85
3467 3741 3.244422 TGGTTCAGATAACCTGTGTGACC 60.244 47.826 8.29 0.00 43.38 4.02
3468 3742 3.997021 CTGGTTCAGATAACCTGTGTGAC 59.003 47.826 8.29 0.00 43.38 3.67
3470 3744 2.744202 GCTGGTTCAGATAACCTGTGTG 59.256 50.000 13.23 0.36 43.38 3.82
3471 3745 2.290323 GGCTGGTTCAGATAACCTGTGT 60.290 50.000 13.23 0.00 43.38 3.72
3472 3746 2.290260 TGGCTGGTTCAGATAACCTGTG 60.290 50.000 13.23 4.15 43.38 3.66
3473 3747 1.985159 TGGCTGGTTCAGATAACCTGT 59.015 47.619 13.23 0.00 43.38 4.00
3474 3748 2.636830 CTGGCTGGTTCAGATAACCTG 58.363 52.381 8.29 8.59 44.27 4.00
3475 3749 1.065126 GCTGGCTGGTTCAGATAACCT 60.065 52.381 8.29 0.00 40.88 3.50
3477 3751 2.012673 CAGCTGGCTGGTTCAGATAAC 58.987 52.381 14.11 0.00 40.17 1.89
3478 3752 1.679944 GCAGCTGGCTGGTTCAGATAA 60.680 52.381 21.76 0.00 43.77 1.75
3479 3753 0.107508 GCAGCTGGCTGGTTCAGATA 60.108 55.000 21.76 0.00 43.77 1.98
3481 3755 2.033141 GCAGCTGGCTGGTTCAGA 59.967 61.111 21.76 0.00 43.77 3.27
3482 3756 3.060615 GGCAGCTGGCTGGTTCAG 61.061 66.667 31.40 0.00 43.77 3.02
3483 3757 4.666253 GGGCAGCTGGCTGGTTCA 62.666 66.667 35.64 0.00 43.77 3.18
3489 3763 4.603535 AAAACCGGGCAGCTGGCT 62.604 61.111 35.64 17.09 44.01 4.75
3490 3764 4.056125 GAAAACCGGGCAGCTGGC 62.056 66.667 30.97 30.97 43.74 4.85
3492 3766 2.335712 GGAGAAAACCGGGCAGCTG 61.336 63.158 10.11 10.11 0.00 4.24
3493 3767 2.034221 GGAGAAAACCGGGCAGCT 59.966 61.111 6.32 0.00 0.00 4.24
3494 3768 3.062466 GGGAGAAAACCGGGCAGC 61.062 66.667 6.32 0.00 0.00 5.25
3495 3769 1.377333 GAGGGAGAAAACCGGGCAG 60.377 63.158 6.32 0.00 0.00 4.85
3496 3770 0.545787 TAGAGGGAGAAAACCGGGCA 60.546 55.000 6.32 0.00 0.00 5.36
3497 3771 0.616891 TTAGAGGGAGAAAACCGGGC 59.383 55.000 6.32 0.00 0.00 6.13
3498 3772 1.405121 CGTTAGAGGGAGAAAACCGGG 60.405 57.143 6.32 0.00 0.00 5.73
3499 3773 1.405121 CCGTTAGAGGGAGAAAACCGG 60.405 57.143 0.00 0.00 0.00 5.28
3510 3784 2.100631 CGCACTTGCCCGTTAGAGG 61.101 63.158 0.00 0.00 37.91 3.69
3511 3785 0.460284 ATCGCACTTGCCCGTTAGAG 60.460 55.000 0.00 0.00 37.91 2.43
3512 3786 0.818938 TATCGCACTTGCCCGTTAGA 59.181 50.000 0.00 0.00 37.91 2.10
3513 3787 1.647346 TTATCGCACTTGCCCGTTAG 58.353 50.000 0.00 0.00 37.91 2.34
3514 3788 2.096220 TTTATCGCACTTGCCCGTTA 57.904 45.000 0.00 0.00 37.91 3.18
3518 3792 3.230743 ACAAATTTATCGCACTTGCCC 57.769 42.857 0.00 0.00 37.91 5.36
3519 3793 4.089923 GTGAACAAATTTATCGCACTTGCC 59.910 41.667 10.31 0.00 37.91 4.52
3520 3794 4.201391 CGTGAACAAATTTATCGCACTTGC 60.201 41.667 13.81 0.00 37.78 4.01
3521 3795 5.058008 GTCGTGAACAAATTTATCGCACTTG 59.942 40.000 13.81 0.00 0.00 3.16
3522 3796 5.049680 AGTCGTGAACAAATTTATCGCACTT 60.050 36.000 13.81 0.67 0.00 3.16
3523 3797 4.451096 AGTCGTGAACAAATTTATCGCACT 59.549 37.500 13.81 12.55 0.00 4.40
3524 3798 4.708601 AGTCGTGAACAAATTTATCGCAC 58.291 39.130 13.81 8.94 0.00 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.