Multiple sequence alignment - TraesCS6B01G441100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G441100 chr6B 100.000 5111 0 0 1 5111 705600112 705605222 0.000000e+00 9439.0
1 TraesCS6B01G441100 chr6B 94.418 2902 140 12 1511 4409 705802329 705805211 0.000000e+00 4442.0
2 TraesCS6B01G441100 chr6B 88.496 2095 229 11 2325 4412 705920512 705922601 0.000000e+00 2523.0
3 TraesCS6B01G441100 chr6B 86.533 2250 289 8 2325 4571 705504320 705506558 0.000000e+00 2464.0
4 TraesCS6B01G441100 chr6B 87.149 2171 261 10 2324 4485 705828450 705830611 0.000000e+00 2447.0
5 TraesCS6B01G441100 chr6B 86.840 2158 260 20 2262 4409 705842431 705844574 0.000000e+00 2390.0
6 TraesCS6B01G441100 chr6B 88.702 1965 209 10 2611 4568 705788803 705790761 0.000000e+00 2386.0
7 TraesCS6B01G441100 chr6B 88.499 1965 213 10 2611 4568 706117254 706119212 0.000000e+00 2364.0
8 TraesCS6B01G441100 chr6B 85.525 2259 296 25 2325 4571 705940922 705943161 0.000000e+00 2331.0
9 TraesCS6B01G441100 chr6B 85.840 2154 283 13 2262 4409 705552324 705554461 0.000000e+00 2268.0
10 TraesCS6B01G441100 chr6B 84.623 2094 303 15 2324 4409 705644450 705646532 0.000000e+00 2065.0
11 TraesCS6B01G441100 chr6B 85.159 1826 227 23 757 2558 705939425 705941230 0.000000e+00 1831.0
12 TraesCS6B01G441100 chr6B 84.486 1779 209 36 798 2558 705643030 705644759 0.000000e+00 1694.0
13 TraesCS6B01G441100 chr6B 86.917 1307 167 4 1316 2620 705841335 705842639 0.000000e+00 1463.0
14 TraesCS6B01G441100 chr6B 90.524 1087 84 13 751 1822 705502516 705503598 0.000000e+00 1419.0
15 TraesCS6B01G441100 chr6B 87.707 1147 111 18 1510 2656 705551371 705552487 0.000000e+00 1310.0
16 TraesCS6B01G441100 chr6B 88.537 1073 85 23 769 1809 705949126 705950192 0.000000e+00 1266.0
17 TraesCS6B01G441100 chr6B 88.208 1060 103 13 1511 2568 705503599 705504638 0.000000e+00 1245.0
18 TraesCS6B01G441100 chr6B 89.757 947 79 9 1511 2457 705919791 705920719 0.000000e+00 1195.0
19 TraesCS6B01G441100 chr6B 88.975 907 79 10 932 1822 705918889 705919790 0.000000e+00 1101.0
20 TraesCS6B01G441100 chr6B 87.211 907 78 22 949 1822 705801427 705802328 0.000000e+00 998.0
21 TraesCS6B01G441100 chr6B 82.514 1058 163 14 1513 2568 705827732 705828769 0.000000e+00 909.0
22 TraesCS6B01G441100 chr6B 90.909 506 44 2 1318 1822 705826931 705827435 0.000000e+00 678.0
23 TraesCS6B01G441100 chr6B 89.516 496 45 4 784 1276 705550296 705550787 5.620000e-174 621.0
24 TraesCS6B01G441100 chr6B 92.593 243 18 0 1037 1279 705841005 705841247 2.930000e-92 350.0
25 TraesCS6B01G441100 chr6B 90.000 270 6 9 407 674 705550062 705550312 3.810000e-86 329.0
26 TraesCS6B01G441100 chr6B 93.488 215 5 4 464 674 705826236 705826445 1.380000e-80 311.0
27 TraesCS6B01G441100 chr6B 81.472 394 50 14 4687 5058 705791382 705791774 8.320000e-78 302.0
28 TraesCS6B01G441100 chr6B 84.424 321 34 10 114 421 705824790 705825107 8.320000e-78 302.0
29 TraesCS6B01G441100 chr6B 81.472 394 50 14 4687 5058 706119833 706120225 8.320000e-78 302.0
30 TraesCS6B01G441100 chr6B 84.387 269 30 5 4632 4888 706150456 706150724 2.360000e-63 254.0
31 TraesCS6B01G441100 chr6B 89.340 197 17 3 201 395 705549823 705550017 1.420000e-60 244.0
32 TraesCS6B01G441100 chr6B 92.105 114 6 2 411 523 705948931 705949042 1.910000e-34 158.0
33 TraesCS6B01G441100 chr6B 84.277 159 23 2 4742 4899 705713859 705714016 2.460000e-33 154.0
34 TraesCS6B01G441100 chr6B 90.435 115 11 0 403 517 705918611 705918725 8.860000e-33 152.0
35 TraesCS6B01G441100 chr6B 96.703 91 3 0 565 655 705949038 705949128 8.860000e-33 152.0
36 TraesCS6B01G441100 chr6B 85.135 148 21 1 4742 4888 705658112 705658259 3.190000e-32 150.0
37 TraesCS6B01G441100 chr6B 91.589 107 9 0 4880 4986 705647967 705648073 1.150000e-31 148.0
38 TraesCS6B01G441100 chr6B 92.079 101 4 1 407 503 705840862 705840962 6.900000e-29 139.0
39 TraesCS6B01G441100 chr6B 91.111 90 6 2 4898 4986 705845391 705845479 2.500000e-23 121.0
40 TraesCS6B01G441100 chr6B 90.588 85 6 2 4902 4985 705832819 705832902 1.500000e-20 111.0
41 TraesCS6B01G441100 chr6B 88.636 88 7 2 250 335 705948631 705948717 2.520000e-18 104.0
42 TraesCS6B01G441100 chr6B 90.541 74 6 1 4902 4974 705831304 705831377 4.210000e-16 97.1
43 TraesCS6B01G441100 chr6B 90.411 73 6 1 4903 4974 705943781 705943853 1.510000e-15 95.3
44 TraesCS6B01G441100 chr6B 100.000 35 0 0 671 705 705550326 705550360 1.190000e-06 65.8
45 TraesCS6B01G441100 chr6B 100.000 35 0 0 671 705 705826459 705826493 1.190000e-06 65.8
46 TraesCS6B01G441100 chr6B 100.000 34 0 0 671 704 705502579 705502612 4.270000e-06 63.9
47 TraesCS6B01G441100 chr6B 100.000 34 0 0 671 704 705801334 705801367 4.270000e-06 63.9
48 TraesCS6B01G441100 chr6B 100.000 28 0 0 417 444 705826208 705826235 9.000000e-03 52.8
49 TraesCS6B01G441100 chr6D 95.183 2076 94 4 2337 4407 462858016 462860090 0.000000e+00 3275.0
50 TraesCS6B01G441100 chr6D 88.688 1105 85 19 751 1816 462856179 462857282 0.000000e+00 1312.0
51 TraesCS6B01G441100 chr6D 88.370 1049 99 12 1521 2568 462857296 462858322 0.000000e+00 1240.0
52 TraesCS6B01G441100 chr6D 94.624 93 5 0 1 93 462882713 462882805 1.480000e-30 145.0
53 TraesCS6B01G441100 chr6D 93.902 82 4 1 312 393 462855856 462855936 6.950000e-24 122.0
54 TraesCS6B01G441100 chr6D 92.208 77 6 0 406 482 462855924 462856000 5.410000e-20 110.0
55 TraesCS6B01G441100 chr6D 100.000 34 0 0 671 704 462856242 462856275 4.270000e-06 63.9
56 TraesCS6B01G441100 chr6A 85.189 1877 252 18 784 2643 609668548 609670415 0.000000e+00 1903.0
57 TraesCS6B01G441100 chr6A 90.755 1060 85 9 767 1822 609573081 609574131 0.000000e+00 1402.0
58 TraesCS6B01G441100 chr6A 87.385 325 19 4 97 400 609720143 609720466 2.260000e-93 353.0
59 TraesCS6B01G441100 chr6A 91.827 208 16 1 746 953 609668346 609668552 6.470000e-74 289.0
60 TraesCS6B01G441100 chr6A 87.006 177 12 4 4632 4797 609692781 609692957 6.760000e-44 189.0
61 TraesCS6B01G441100 chr6A 93.860 114 7 0 201 314 609642512 609642625 6.800000e-39 172.0
62 TraesCS6B01G441100 chr6A 89.916 119 10 2 399 517 609720666 609720782 8.860000e-33 152.0
63 TraesCS6B01G441100 chr6A 92.632 95 6 1 1 94 609719996 609720090 8.930000e-28 135.0
64 TraesCS6B01G441100 chr6A 94.186 86 4 1 315 400 609667938 609668022 4.150000e-26 130.0
65 TraesCS6B01G441100 chr6A 95.082 61 3 0 4908 4968 609744159 609744219 4.210000e-16 97.1
66 TraesCS6B01G441100 chr6A 87.654 81 9 1 4902 4981 609578464 609578544 5.450000e-15 93.5
67 TraesCS6B01G441100 chr6A 100.000 34 0 0 671 704 609668578 609668611 4.270000e-06 63.9
68 TraesCS6B01G441100 chrUn 91.223 319 21 4 751 1063 476606722 476607039 1.320000e-115 427.0
69 TraesCS6B01G441100 chrUn 100.000 34 0 0 671 704 476606785 476606818 4.270000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G441100 chr6B 705600112 705605222 5110 False 9439.000000 9439 100.000000 1 5111 1 chr6B.!!$F1 5110
1 TraesCS6B01G441100 chr6B 705801334 705805211 3877 False 1834.633333 4442 93.876333 671 4409 3 chr6B.!!$F9 3738
2 TraesCS6B01G441100 chr6B 705939425 705943853 4428 False 1419.100000 2331 87.031667 757 4974 3 chr6B.!!$F13 4217
3 TraesCS6B01G441100 chr6B 705788803 705791774 2971 False 1344.000000 2386 85.087000 2611 5058 2 chr6B.!!$F8 2447
4 TraesCS6B01G441100 chr6B 706117254 706120225 2971 False 1333.000000 2364 84.985500 2611 5058 2 chr6B.!!$F15 2447
5 TraesCS6B01G441100 chr6B 705643030 705648073 5043 False 1302.333333 2065 86.899333 798 4986 3 chr6B.!!$F7 4188
6 TraesCS6B01G441100 chr6B 705502516 705506558 4042 False 1297.975000 2464 91.316250 671 4571 4 chr6B.!!$F5 3900
7 TraesCS6B01G441100 chr6B 705918611 705922601 3990 False 1242.750000 2523 89.415750 403 4412 4 chr6B.!!$F12 4009
8 TraesCS6B01G441100 chr6B 705840862 705845479 4617 False 892.600000 2390 89.908000 407 4986 5 chr6B.!!$F11 4579
9 TraesCS6B01G441100 chr6B 705549823 705554461 4638 False 806.300000 2268 90.400500 201 4409 6 chr6B.!!$F6 4208
10 TraesCS6B01G441100 chr6B 705824790 705832902 8112 False 552.633333 2447 91.068111 114 4985 9 chr6B.!!$F10 4871
11 TraesCS6B01G441100 chr6B 705948631 705950192 1561 False 420.000000 1266 91.495250 250 1809 4 chr6B.!!$F14 1559
12 TraesCS6B01G441100 chr6D 462855856 462860090 4234 False 1020.483333 3275 93.058500 312 4407 6 chr6D.!!$F2 4095
13 TraesCS6B01G441100 chr6A 609573081 609574131 1050 False 1402.000000 1402 90.755000 767 1822 1 chr6A.!!$F1 1055
14 TraesCS6B01G441100 chr6A 609667938 609670415 2477 False 596.475000 1903 92.800500 315 2643 4 chr6A.!!$F6 2328
15 TraesCS6B01G441100 chr6A 609719996 609720782 786 False 213.333333 353 89.977667 1 517 3 chr6A.!!$F7 516

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
64 66 0.027063 AAAAGTTTCACACGTCGCCG 59.973 50.0 0.00 0.0 40.83 6.46 F
739 2285 0.044855 AGGGAGGGGTTGCTAGATGT 59.955 55.0 0.00 0.0 0.00 3.06 F
1631 3495 0.033504 TGGTTGCCACGTCTCTCTTC 59.966 55.0 0.00 0.0 0.00 2.87 F
2335 5312 0.037447 AGAGCTTTTGGACCTCAGCC 59.963 55.0 6.53 0.0 32.25 4.85 F
2336 5313 0.250901 GAGCTTTTGGACCTCAGCCA 60.251 55.0 6.53 0.0 32.25 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1221 2971 0.392461 GATGGCCCGTTCTGTTGCTA 60.392 55.000 0.00 0.0 0.00 3.49 R
2318 5295 0.538287 GTGGCTGAGGTCCAAAAGCT 60.538 55.000 9.53 0.0 38.79 3.74 R
3230 6716 2.459934 GAACAAGTTCCTTTTGGCACG 58.540 47.619 1.51 0.0 40.74 5.34 R
4108 7594 1.478471 CCACAGACCCACCACAAATCA 60.478 52.381 0.00 0.0 0.00 2.57 R
4215 7701 1.742411 GCGCACCTTATAGCCACTTGA 60.742 52.381 0.30 0.0 0.00 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 4.733405 CCGTAACACAAGCAGAAAAGTTTC 59.267 41.667 0.00 0.00 37.45 2.78
56 57 4.782019 ACACAAGCAGAAAAGTTTCACA 57.218 36.364 6.56 0.00 39.61 3.58
58 59 3.543494 CACAAGCAGAAAAGTTTCACACG 59.457 43.478 6.56 0.00 39.61 4.49
64 66 0.027063 AAAAGTTTCACACGTCGCCG 59.973 50.000 0.00 0.00 40.83 6.46
75 77 4.778143 GTCGCCGCAACCCCTCAT 62.778 66.667 0.00 0.00 0.00 2.90
94 96 4.012811 TTCTGCAGGCGAGCTGCT 62.013 61.111 15.13 0.00 46.95 4.24
101 153 3.782244 GGCGAGCTGCTGACAACG 61.782 66.667 7.01 4.94 45.43 4.10
110 162 2.805353 CTGACAACGACGCCTCCG 60.805 66.667 0.00 0.00 41.14 4.63
134 186 0.829333 ACTGAAGCGCCTCATCATCT 59.171 50.000 9.56 0.00 0.00 2.90
139 191 3.636764 TGAAGCGCCTCATCATCTACTTA 59.363 43.478 4.15 0.00 0.00 2.24
167 219 0.872388 GTTCGCTTCCCATTTCACGT 59.128 50.000 0.00 0.00 0.00 4.49
169 221 2.004583 TCGCTTCCCATTTCACGTAG 57.995 50.000 0.00 0.00 0.00 3.51
197 249 2.072298 AGAGCAATTCAGACTTGTCGC 58.928 47.619 2.71 0.00 0.00 5.19
198 250 1.800586 GAGCAATTCAGACTTGTCGCA 59.199 47.619 2.71 0.00 0.00 5.10
212 285 1.006832 GTCGCAATATGACGTGCCTT 58.993 50.000 0.00 0.00 37.47 4.35
255 328 1.419381 TATGCGAGCCACCCTATTCA 58.581 50.000 0.00 0.00 0.00 2.57
367 442 3.938963 TCATTCGGCCATAACTTGACTTC 59.061 43.478 2.24 0.00 0.00 3.01
462 1919 4.256920 ACTAGCTTTGCTTGTAGACCATG 58.743 43.478 4.99 0.00 42.10 3.66
495 1952 2.031120 CCGGTAATTGGCCAACATGAT 58.969 47.619 23.27 0.21 0.00 2.45
677 2223 8.681486 ATTGAGATAAATATTACAGCTGTGCA 57.319 30.769 29.57 16.00 0.00 4.57
678 2224 8.681486 TTGAGATAAATATTACAGCTGTGCAT 57.319 30.769 29.57 21.49 0.00 3.96
679 2225 8.091385 TGAGATAAATATTACAGCTGTGCATG 57.909 34.615 29.57 0.00 0.00 4.06
680 2226 7.173735 TGAGATAAATATTACAGCTGTGCATGG 59.826 37.037 29.57 0.00 0.00 3.66
681 2227 7.000472 AGATAAATATTACAGCTGTGCATGGT 59.000 34.615 29.57 12.62 0.00 3.55
682 2228 4.906065 AATATTACAGCTGTGCATGGTG 57.094 40.909 29.57 16.63 38.68 4.17
683 2229 1.466856 ATTACAGCTGTGCATGGTGG 58.533 50.000 29.57 0.00 37.25 4.61
684 2230 0.608856 TTACAGCTGTGCATGGTGGG 60.609 55.000 29.57 0.00 37.25 4.61
685 2231 3.755628 CAGCTGTGCATGGTGGGC 61.756 66.667 5.25 1.88 0.00 5.36
686 2232 3.975591 AGCTGTGCATGGTGGGCT 61.976 61.111 0.00 0.00 0.00 5.19
687 2233 3.755628 GCTGTGCATGGTGGGCTG 61.756 66.667 0.00 0.00 0.00 4.85
688 2234 2.282674 CTGTGCATGGTGGGCTGT 60.283 61.111 0.00 0.00 0.00 4.40
689 2235 2.282391 TGTGCATGGTGGGCTGTC 60.282 61.111 0.00 0.00 0.00 3.51
690 2236 3.064324 GTGCATGGTGGGCTGTCC 61.064 66.667 0.00 0.00 0.00 4.02
691 2237 4.720902 TGCATGGTGGGCTGTCCG 62.721 66.667 0.00 0.00 38.76 4.79
692 2238 4.408821 GCATGGTGGGCTGTCCGA 62.409 66.667 0.00 0.00 38.76 4.55
693 2239 2.350895 CATGGTGGGCTGTCCGAA 59.649 61.111 0.00 0.00 38.76 4.30
694 2240 1.077501 CATGGTGGGCTGTCCGAAT 60.078 57.895 0.00 0.00 38.76 3.34
695 2241 1.097547 CATGGTGGGCTGTCCGAATC 61.098 60.000 0.00 0.00 38.76 2.52
696 2242 1.561769 ATGGTGGGCTGTCCGAATCA 61.562 55.000 0.00 0.00 38.76 2.57
697 2243 1.002624 GGTGGGCTGTCCGAATCAA 60.003 57.895 0.00 0.00 38.76 2.57
698 2244 1.305930 GGTGGGCTGTCCGAATCAAC 61.306 60.000 0.00 0.00 38.76 3.18
699 2245 0.605319 GTGGGCTGTCCGAATCAACA 60.605 55.000 0.00 0.00 38.76 3.33
700 2246 0.109532 TGGGCTGTCCGAATCAACAA 59.890 50.000 0.00 0.00 38.76 2.83
701 2247 1.243902 GGGCTGTCCGAATCAACAAA 58.756 50.000 0.00 0.00 0.00 2.83
702 2248 1.818674 GGGCTGTCCGAATCAACAAAT 59.181 47.619 0.00 0.00 0.00 2.32
703 2249 2.231235 GGGCTGTCCGAATCAACAAATT 59.769 45.455 0.00 0.00 0.00 1.82
704 2250 3.306019 GGGCTGTCCGAATCAACAAATTT 60.306 43.478 0.00 0.00 0.00 1.82
705 2251 3.674753 GGCTGTCCGAATCAACAAATTTG 59.325 43.478 16.67 16.67 0.00 2.32
706 2252 4.298332 GCTGTCCGAATCAACAAATTTGT 58.702 39.130 18.13 18.13 44.72 2.83
707 2253 4.148696 GCTGTCCGAATCAACAAATTTGTG 59.851 41.667 23.93 16.99 41.31 3.33
708 2254 5.255710 TGTCCGAATCAACAAATTTGTGT 57.744 34.783 23.93 11.57 41.31 3.72
709 2255 6.378710 TGTCCGAATCAACAAATTTGTGTA 57.621 33.333 23.93 15.18 41.31 2.90
710 2256 6.976088 TGTCCGAATCAACAAATTTGTGTAT 58.024 32.000 23.93 16.64 41.31 2.29
711 2257 7.429633 TGTCCGAATCAACAAATTTGTGTATT 58.570 30.769 23.93 22.82 41.31 1.89
712 2258 7.923344 TGTCCGAATCAACAAATTTGTGTATTT 59.077 29.630 23.93 14.73 41.31 1.40
713 2259 9.400638 GTCCGAATCAACAAATTTGTGTATTTA 57.599 29.630 23.93 12.48 41.31 1.40
714 2260 9.967346 TCCGAATCAACAAATTTGTGTATTTAA 57.033 25.926 23.93 12.21 41.31 1.52
722 2268 9.981114 AACAAATTTGTGTATTTAAGGAAGAGG 57.019 29.630 23.93 0.00 41.31 3.69
723 2269 8.585018 ACAAATTTGTGTATTTAAGGAAGAGGG 58.415 33.333 22.71 0.00 40.49 4.30
724 2270 8.802267 CAAATTTGTGTATTTAAGGAAGAGGGA 58.198 33.333 10.15 0.00 0.00 4.20
725 2271 8.581253 AATTTGTGTATTTAAGGAAGAGGGAG 57.419 34.615 0.00 0.00 0.00 4.30
726 2272 5.693769 TGTGTATTTAAGGAAGAGGGAGG 57.306 43.478 0.00 0.00 0.00 4.30
727 2273 4.473559 TGTGTATTTAAGGAAGAGGGAGGG 59.526 45.833 0.00 0.00 0.00 4.30
728 2274 4.045022 TGTATTTAAGGAAGAGGGAGGGG 58.955 47.826 0.00 0.00 0.00 4.79
729 2275 2.755019 TTTAAGGAAGAGGGAGGGGT 57.245 50.000 0.00 0.00 0.00 4.95
730 2276 2.755019 TTAAGGAAGAGGGAGGGGTT 57.245 50.000 0.00 0.00 0.00 4.11
731 2277 1.966845 TAAGGAAGAGGGAGGGGTTG 58.033 55.000 0.00 0.00 0.00 3.77
732 2278 1.501654 AAGGAAGAGGGAGGGGTTGC 61.502 60.000 0.00 0.00 0.00 4.17
733 2279 1.925972 GGAAGAGGGAGGGGTTGCT 60.926 63.158 0.00 0.00 0.00 3.91
734 2280 0.620700 GGAAGAGGGAGGGGTTGCTA 60.621 60.000 0.00 0.00 0.00 3.49
735 2281 0.833949 GAAGAGGGAGGGGTTGCTAG 59.166 60.000 0.00 0.00 0.00 3.42
736 2282 0.417841 AAGAGGGAGGGGTTGCTAGA 59.582 55.000 0.00 0.00 0.00 2.43
737 2283 0.644937 AGAGGGAGGGGTTGCTAGAT 59.355 55.000 0.00 0.00 0.00 1.98
738 2284 0.761802 GAGGGAGGGGTTGCTAGATG 59.238 60.000 0.00 0.00 0.00 2.90
739 2285 0.044855 AGGGAGGGGTTGCTAGATGT 59.955 55.000 0.00 0.00 0.00 3.06
740 2286 0.181350 GGGAGGGGTTGCTAGATGTG 59.819 60.000 0.00 0.00 0.00 3.21
741 2287 0.912486 GGAGGGGTTGCTAGATGTGT 59.088 55.000 0.00 0.00 0.00 3.72
742 2288 1.134371 GGAGGGGTTGCTAGATGTGTC 60.134 57.143 0.00 0.00 0.00 3.67
743 2289 1.834263 GAGGGGTTGCTAGATGTGTCT 59.166 52.381 0.00 0.00 38.52 3.41
744 2290 1.556911 AGGGGTTGCTAGATGTGTCTG 59.443 52.381 0.00 0.00 35.87 3.51
745 2291 1.555075 GGGGTTGCTAGATGTGTCTGA 59.445 52.381 0.00 0.00 35.87 3.27
746 2292 2.419297 GGGGTTGCTAGATGTGTCTGAG 60.419 54.545 0.00 0.00 35.87 3.35
747 2293 2.497675 GGGTTGCTAGATGTGTCTGAGA 59.502 50.000 0.00 0.00 35.87 3.27
748 2294 3.133721 GGGTTGCTAGATGTGTCTGAGAT 59.866 47.826 0.00 0.00 35.87 2.75
749 2295 4.367450 GGTTGCTAGATGTGTCTGAGATC 58.633 47.826 0.00 0.00 35.87 2.75
750 2296 4.099266 GGTTGCTAGATGTGTCTGAGATCT 59.901 45.833 0.00 0.00 38.27 2.75
751 2297 4.915158 TGCTAGATGTGTCTGAGATCTG 57.085 45.455 0.00 0.00 35.48 2.90
752 2298 4.530875 TGCTAGATGTGTCTGAGATCTGA 58.469 43.478 0.00 0.00 35.48 3.27
753 2299 4.337836 TGCTAGATGTGTCTGAGATCTGAC 59.662 45.833 0.00 11.64 42.74 3.51
780 2326 5.181056 ACAATGTGTGTTATTGAGCGAATCA 59.819 36.000 4.87 0.00 37.01 2.57
832 2382 1.904865 CTGTGCATGGTGGGCTGTT 60.905 57.895 0.00 0.00 0.00 3.16
939 2674 1.077357 TGCGGTTGTGGTGGAACTT 60.077 52.632 0.00 0.00 36.74 2.66
946 2681 4.320202 CGGTTGTGGTGGAACTTGAATAAG 60.320 45.833 0.00 0.00 39.86 1.73
947 2682 4.825085 GGTTGTGGTGGAACTTGAATAAGA 59.175 41.667 0.00 0.00 37.36 2.10
948 2683 5.048713 GGTTGTGGTGGAACTTGAATAAGAG 60.049 44.000 0.00 0.00 37.36 2.85
949 2684 5.560722 TGTGGTGGAACTTGAATAAGAGA 57.439 39.130 0.00 0.00 37.36 3.10
950 2685 6.126863 TGTGGTGGAACTTGAATAAGAGAT 57.873 37.500 0.00 0.00 37.36 2.75
952 2687 7.685481 TGTGGTGGAACTTGAATAAGAGATAA 58.315 34.615 0.00 0.00 37.36 1.75
953 2688 7.824289 TGTGGTGGAACTTGAATAAGAGATAAG 59.176 37.037 0.00 0.00 37.36 1.73
954 2689 6.823689 TGGTGGAACTTGAATAAGAGATAAGC 59.176 38.462 0.00 0.00 37.36 3.09
955 2690 7.051000 GGTGGAACTTGAATAAGAGATAAGCT 58.949 38.462 0.00 0.00 37.36 3.74
959 2694 7.042119 GGAACTTGAATAAGAGATAAGCTGCTC 60.042 40.741 1.00 0.00 37.36 4.26
961 2696 6.985645 ACTTGAATAAGAGATAAGCTGCTCTG 59.014 38.462 12.99 4.00 40.43 3.35
963 2698 2.618442 AAGAGATAAGCTGCTCTGCC 57.382 50.000 12.99 0.00 40.43 4.85
1221 2971 2.203182 TGGAAGGGAGTCCGGTGT 59.797 61.111 0.00 0.00 40.96 4.16
1273 3032 0.460109 CCTCCGCAACATCGACATGA 60.460 55.000 0.00 0.00 33.72 3.07
1303 3152 2.168496 ACACCATGTACGACTACAGCT 58.832 47.619 0.00 0.00 36.28 4.24
1304 3153 3.349927 ACACCATGTACGACTACAGCTA 58.650 45.455 0.00 0.00 36.28 3.32
1305 3154 3.128242 ACACCATGTACGACTACAGCTAC 59.872 47.826 0.00 0.00 36.28 3.58
1306 3155 3.128068 CACCATGTACGACTACAGCTACA 59.872 47.826 0.00 0.00 36.28 2.74
1307 3156 3.760151 ACCATGTACGACTACAGCTACAA 59.240 43.478 0.00 0.00 36.28 2.41
1308 3157 4.219070 ACCATGTACGACTACAGCTACAAA 59.781 41.667 0.00 0.00 36.28 2.83
1309 3158 5.165676 CCATGTACGACTACAGCTACAAAA 58.834 41.667 0.00 0.00 36.28 2.44
1310 3159 5.810587 CCATGTACGACTACAGCTACAAAAT 59.189 40.000 0.00 0.00 36.28 1.82
1311 3160 6.237835 CCATGTACGACTACAGCTACAAAATG 60.238 42.308 0.00 0.00 36.28 2.32
1312 3161 5.165676 TGTACGACTACAGCTACAAAATGG 58.834 41.667 0.00 0.00 0.00 3.16
1313 3162 4.267349 ACGACTACAGCTACAAAATGGT 57.733 40.909 0.00 0.00 0.00 3.55
1314 3163 4.638304 ACGACTACAGCTACAAAATGGTT 58.362 39.130 0.00 0.00 0.00 3.67
1333 3182 2.211250 TGACTACAGCTACCCGAACT 57.789 50.000 0.00 0.00 0.00 3.01
1631 3495 0.033504 TGGTTGCCACGTCTCTCTTC 59.966 55.000 0.00 0.00 0.00 2.87
1658 3522 3.057033 AGGCATCTTGACATGAGTTTTGC 60.057 43.478 0.00 6.24 0.00 3.68
1659 3523 3.057033 GGCATCTTGACATGAGTTTTGCT 60.057 43.478 0.00 0.00 0.00 3.91
1677 3541 1.404717 GCTGATCTTGGTTCTGCGAGA 60.405 52.381 0.00 0.00 0.00 4.04
1688 3552 1.996292 TCTGCGAGAGATTGGTTTCG 58.004 50.000 0.00 0.00 36.23 3.46
1692 3556 1.404315 GCGAGAGATTGGTTTCGGAGT 60.404 52.381 0.00 0.00 33.89 3.85
1723 3587 4.516698 TGCTTCCTTCTCTTAAAGTGCTTG 59.483 41.667 0.00 0.00 0.00 4.01
1801 4547 3.506810 CTCACACATCTCGAAGTCCTTC 58.493 50.000 0.00 0.00 36.29 3.46
1872 4618 5.640147 TGGAATCTCAAAAGCCTTAAGGAA 58.360 37.500 26.21 1.75 37.39 3.36
1969 4721 5.441718 AGATTTAAGTGGGAATCAGCTCA 57.558 39.130 0.00 0.00 35.28 4.26
2206 4958 5.565439 GCATCTAAAAACATGTTGAGTGGCT 60.565 40.000 12.82 0.00 0.00 4.75
2309 5286 9.654417 CTTGAAAGAACAATTTGCAAATTTAGG 57.346 29.630 30.13 22.17 36.52 2.69
2310 5287 8.152309 TGAAAGAACAATTTGCAAATTTAGGG 57.848 30.769 30.13 21.86 36.52 3.53
2311 5288 7.989741 TGAAAGAACAATTTGCAAATTTAGGGA 59.010 29.630 30.13 10.45 36.52 4.20
2312 5289 8.744568 AAAGAACAATTTGCAAATTTAGGGAA 57.255 26.923 30.13 0.00 36.52 3.97
2313 5290 8.744568 AAGAACAATTTGCAAATTTAGGGAAA 57.255 26.923 30.13 0.00 36.52 3.13
2314 5291 8.922931 AGAACAATTTGCAAATTTAGGGAAAT 57.077 26.923 30.13 12.89 36.52 2.17
2315 5292 9.353431 AGAACAATTTGCAAATTTAGGGAAATT 57.647 25.926 30.13 15.67 45.30 1.82
2320 5297 8.722480 ATTTGCAAATTTAGGGAAATTAGAGC 57.278 30.769 18.99 3.27 43.10 4.09
2321 5298 7.480760 TTGCAAATTTAGGGAAATTAGAGCT 57.519 32.000 0.00 0.00 43.10 4.09
2322 5299 7.480760 TGCAAATTTAGGGAAATTAGAGCTT 57.519 32.000 0.00 0.00 43.10 3.74
2323 5300 7.906327 TGCAAATTTAGGGAAATTAGAGCTTT 58.094 30.769 0.00 0.00 43.10 3.51
2324 5301 8.374743 TGCAAATTTAGGGAAATTAGAGCTTTT 58.625 29.630 0.00 0.00 43.10 2.27
2325 5302 8.659491 GCAAATTTAGGGAAATTAGAGCTTTTG 58.341 33.333 0.00 0.00 43.10 2.44
2326 5303 9.154847 CAAATTTAGGGAAATTAGAGCTTTTGG 57.845 33.333 0.00 0.00 43.10 3.28
2327 5304 8.664669 AATTTAGGGAAATTAGAGCTTTTGGA 57.335 30.769 0.00 0.00 42.29 3.53
2328 5305 7.462571 TTTAGGGAAATTAGAGCTTTTGGAC 57.537 36.000 0.00 0.00 0.00 4.02
2329 5306 4.344978 AGGGAAATTAGAGCTTTTGGACC 58.655 43.478 0.00 0.00 0.00 4.46
2330 5307 4.044698 AGGGAAATTAGAGCTTTTGGACCT 59.955 41.667 0.00 0.00 0.00 3.85
2331 5308 4.399618 GGGAAATTAGAGCTTTTGGACCTC 59.600 45.833 0.00 0.00 0.00 3.85
2332 5309 5.010282 GGAAATTAGAGCTTTTGGACCTCA 58.990 41.667 0.00 0.00 0.00 3.86
2333 5310 5.124617 GGAAATTAGAGCTTTTGGACCTCAG 59.875 44.000 0.00 0.00 0.00 3.35
2334 5311 2.770164 TAGAGCTTTTGGACCTCAGC 57.230 50.000 0.00 0.00 0.00 4.26
2335 5312 0.037447 AGAGCTTTTGGACCTCAGCC 59.963 55.000 6.53 0.00 32.25 4.85
2336 5313 0.250901 GAGCTTTTGGACCTCAGCCA 60.251 55.000 6.53 0.00 32.25 4.75
2337 5314 0.538287 AGCTTTTGGACCTCAGCCAC 60.538 55.000 6.53 0.00 34.56 5.01
2338 5315 0.823356 GCTTTTGGACCTCAGCCACA 60.823 55.000 0.00 0.00 34.56 4.17
2339 5316 1.691196 CTTTTGGACCTCAGCCACAA 58.309 50.000 0.00 0.00 34.56 3.33
2340 5317 2.242043 CTTTTGGACCTCAGCCACAAT 58.758 47.619 0.00 0.00 34.56 2.71
2341 5318 3.420893 CTTTTGGACCTCAGCCACAATA 58.579 45.455 0.00 0.00 34.56 1.90
2342 5319 3.517296 TTTGGACCTCAGCCACAATAA 57.483 42.857 0.00 0.00 34.56 1.40
2343 5320 2.489938 TGGACCTCAGCCACAATAAC 57.510 50.000 0.00 0.00 0.00 1.89
2344 5321 1.985159 TGGACCTCAGCCACAATAACT 59.015 47.619 0.00 0.00 0.00 2.24
2345 5322 2.375174 TGGACCTCAGCCACAATAACTT 59.625 45.455 0.00 0.00 0.00 2.66
2346 5323 3.010420 GGACCTCAGCCACAATAACTTC 58.990 50.000 0.00 0.00 0.00 3.01
2347 5324 3.559171 GGACCTCAGCCACAATAACTTCA 60.559 47.826 0.00 0.00 0.00 3.02
2348 5325 4.072131 GACCTCAGCCACAATAACTTCAA 58.928 43.478 0.00 0.00 0.00 2.69
2349 5326 3.821033 ACCTCAGCCACAATAACTTCAAC 59.179 43.478 0.00 0.00 0.00 3.18
2350 5327 3.120199 CCTCAGCCACAATAACTTCAACG 60.120 47.826 0.00 0.00 0.00 4.10
2351 5328 2.811431 TCAGCCACAATAACTTCAACGG 59.189 45.455 0.00 0.00 0.00 4.44
2352 5329 2.552315 CAGCCACAATAACTTCAACGGT 59.448 45.455 0.00 0.00 0.00 4.83
2353 5330 2.552315 AGCCACAATAACTTCAACGGTG 59.448 45.455 0.00 0.00 0.00 4.94
2354 5331 2.292292 GCCACAATAACTTCAACGGTGT 59.708 45.455 0.00 0.00 0.00 4.16
2355 5332 3.851838 GCCACAATAACTTCAACGGTGTG 60.852 47.826 0.00 0.00 35.72 3.82
2356 5333 3.296628 CACAATAACTTCAACGGTGTGC 58.703 45.455 0.00 0.00 0.00 4.57
2357 5334 3.003275 CACAATAACTTCAACGGTGTGCT 59.997 43.478 0.00 0.00 0.00 4.40
2358 5335 3.630312 ACAATAACTTCAACGGTGTGCTT 59.370 39.130 0.00 0.00 0.00 3.91
2359 5336 4.097286 ACAATAACTTCAACGGTGTGCTTT 59.903 37.500 0.00 0.00 0.00 3.51
2360 5337 4.911514 ATAACTTCAACGGTGTGCTTTT 57.088 36.364 0.00 0.00 0.00 2.27
2361 5338 2.559998 ACTTCAACGGTGTGCTTTTG 57.440 45.000 0.00 0.00 0.00 2.44
2362 5339 2.088423 ACTTCAACGGTGTGCTTTTGA 58.912 42.857 0.00 0.00 0.00 2.69
2363 5340 2.490115 ACTTCAACGGTGTGCTTTTGAA 59.510 40.909 0.00 0.00 36.70 2.69
2364 5341 3.057174 ACTTCAACGGTGTGCTTTTGAAA 60.057 39.130 0.00 0.00 37.48 2.69
2365 5342 3.143807 TCAACGGTGTGCTTTTGAAAG 57.856 42.857 0.00 0.00 39.03 2.62
2366 5343 2.750166 TCAACGGTGTGCTTTTGAAAGA 59.250 40.909 0.00 0.00 38.28 2.52
2367 5344 3.191581 TCAACGGTGTGCTTTTGAAAGAA 59.808 39.130 0.00 0.00 38.28 2.52
2368 5345 3.145212 ACGGTGTGCTTTTGAAAGAAC 57.855 42.857 7.52 7.52 43.56 3.01
2375 5352 4.751172 GTGCTTTTGAAAGAACAATTCGC 58.249 39.130 9.27 0.00 42.92 4.70
2376 5353 4.267452 GTGCTTTTGAAAGAACAATTCGCA 59.733 37.500 9.27 0.00 42.92 5.10
2377 5354 4.867047 TGCTTTTGAAAGAACAATTCGCAA 59.133 33.333 7.63 0.00 38.28 4.85
2378 5355 5.349817 TGCTTTTGAAAGAACAATTCGCAAA 59.650 32.000 7.63 0.00 38.28 3.68
2379 5356 6.036953 TGCTTTTGAAAGAACAATTCGCAAAT 59.963 30.769 7.63 0.00 38.28 2.32
2380 5357 6.906678 GCTTTTGAAAGAACAATTCGCAAATT 59.093 30.769 7.63 0.00 38.28 1.82
2381 5358 7.429051 GCTTTTGAAAGAACAATTCGCAAATTT 59.571 29.630 7.63 0.00 38.28 1.82
2382 5359 9.913451 CTTTTGAAAGAACAATTCGCAAATTTA 57.087 25.926 0.00 0.00 38.28 1.40
2383 5360 9.913451 TTTTGAAAGAACAATTCGCAAATTTAG 57.087 25.926 0.00 0.00 32.69 1.85
2429 5631 2.422597 CCACAATAACTTCAGCGGTGA 58.577 47.619 14.39 14.39 0.00 4.02
2471 5955 3.426292 GCAAGTTTAGGCGCCTTAAAGAG 60.426 47.826 37.74 23.07 0.00 2.85
2476 5960 2.561478 AGGCGCCTTAAAGAGTTTGA 57.439 45.000 27.08 0.00 0.00 2.69
2529 6013 4.885413 TCTCCAATGAACAATTTGCAAGG 58.115 39.130 0.00 0.00 0.00 3.61
2532 6016 5.055812 TCCAATGAACAATTTGCAAGGTTC 58.944 37.500 23.06 23.06 39.93 3.62
2544 6028 2.625790 TGCAAGGTTCGGCAACTTAAAT 59.374 40.909 0.00 0.00 37.03 1.40
2672 6156 1.303236 TGCTCGTGGGGGAACATTG 60.303 57.895 0.00 0.00 0.00 2.82
2930 6414 4.006319 GCTTCCTTCTTGCAAGTATCAGT 58.994 43.478 25.19 0.00 0.00 3.41
3106 6592 3.887716 GCCATCAGAGTTAAATGCTCCAT 59.112 43.478 0.00 0.00 33.69 3.41
3230 6716 6.534634 ACCAGTTAACAGGAGATATTATGCC 58.465 40.000 22.62 0.00 0.00 4.40
3539 7025 4.275936 AGCACACAACAAGATAACAGGAAC 59.724 41.667 0.00 0.00 0.00 3.62
3606 7092 1.837090 GCAGGACACGGGGGATTAT 59.163 57.895 0.00 0.00 0.00 1.28
3713 7199 8.792633 TCTTGATTTGTCAAGTAATAGTTTGGG 58.207 33.333 15.43 0.00 45.26 4.12
3714 7200 7.461182 TGATTTGTCAAGTAATAGTTTGGGG 57.539 36.000 0.00 0.00 0.00 4.96
3716 7202 5.586155 TTGTCAAGTAATAGTTTGGGGGA 57.414 39.130 0.00 0.00 0.00 4.81
3744 7230 6.731448 AGGTTCCAGAGGAGATAACTTTACTT 59.269 38.462 0.00 0.00 31.21 2.24
3745 7231 6.819146 GGTTCCAGAGGAGATAACTTTACTTG 59.181 42.308 0.00 0.00 31.21 3.16
3801 7287 4.591321 ACTCATAGGAGCAATCCCAAAA 57.409 40.909 3.87 0.00 45.42 2.44
4001 7487 8.736097 ATGTATATCTACATTGGTAACCCTGA 57.264 34.615 0.00 0.00 44.42 3.86
4179 7665 0.324091 CATGGAGGGCTGCCTTCTTT 60.324 55.000 27.08 14.01 29.89 2.52
4233 7719 3.343617 TGTTCAAGTGGCTATAAGGTGC 58.656 45.455 0.00 0.00 0.00 5.01
4266 7752 1.192534 GAGAAAACTCAAGACGGTGCG 59.807 52.381 0.00 0.00 0.00 5.34
4315 7801 6.942532 AGCGAATTGTGTGTATCCAAATAT 57.057 33.333 0.00 0.00 0.00 1.28
4316 7802 7.333528 AGCGAATTGTGTGTATCCAAATATT 57.666 32.000 0.00 0.00 0.00 1.28
4317 7803 8.445275 AGCGAATTGTGTGTATCCAAATATTA 57.555 30.769 0.00 0.00 0.00 0.98
4318 7804 9.066892 AGCGAATTGTGTGTATCCAAATATTAT 57.933 29.630 0.00 0.00 0.00 1.28
4319 7805 9.677567 GCGAATTGTGTGTATCCAAATATTATT 57.322 29.630 0.00 0.00 0.00 1.40
4351 7837 8.995027 TTTGTACCATATCCATATTTTCAGCT 57.005 30.769 0.00 0.00 0.00 4.24
4352 7838 8.621532 TTGTACCATATCCATATTTTCAGCTC 57.378 34.615 0.00 0.00 0.00 4.09
4353 7839 7.977818 TGTACCATATCCATATTTTCAGCTCT 58.022 34.615 0.00 0.00 0.00 4.09
4354 7840 9.100197 TGTACCATATCCATATTTTCAGCTCTA 57.900 33.333 0.00 0.00 0.00 2.43
4355 7841 9.944376 GTACCATATCCATATTTTCAGCTCTAA 57.056 33.333 0.00 0.00 0.00 2.10
4362 7848 8.396272 TCCATATTTTCAGCTCTAAATTAGCC 57.604 34.615 7.63 0.00 41.02 3.93
4363 7849 8.220559 TCCATATTTTCAGCTCTAAATTAGCCT 58.779 33.333 7.63 0.00 41.02 4.58
4364 7850 8.854117 CCATATTTTCAGCTCTAAATTAGCCTT 58.146 33.333 7.63 0.00 41.02 4.35
4365 7851 9.674824 CATATTTTCAGCTCTAAATTAGCCTTG 57.325 33.333 7.63 0.00 41.02 3.61
4366 7852 6.515272 TTTTCAGCTCTAAATTAGCCTTGG 57.485 37.500 0.00 0.00 41.02 3.61
4367 7853 3.545703 TCAGCTCTAAATTAGCCTTGGC 58.454 45.455 2.97 2.97 41.02 4.52
4368 7854 3.200825 TCAGCTCTAAATTAGCCTTGGCT 59.799 43.478 18.74 18.74 41.02 4.75
4369 7855 3.314635 CAGCTCTAAATTAGCCTTGGCTG 59.685 47.826 23.03 6.27 41.02 4.85
4370 7856 2.620585 GCTCTAAATTAGCCTTGGCTGG 59.379 50.000 23.03 7.17 33.73 4.85
4371 7857 3.685550 GCTCTAAATTAGCCTTGGCTGGA 60.686 47.826 23.03 12.34 33.73 3.86
4372 7858 3.879892 CTCTAAATTAGCCTTGGCTGGAC 59.120 47.826 23.03 0.00 0.00 4.02
4373 7859 1.463674 AAATTAGCCTTGGCTGGACG 58.536 50.000 23.03 0.00 0.00 4.79
4374 7860 0.394352 AATTAGCCTTGGCTGGACGG 60.394 55.000 23.03 0.00 0.00 4.79
4375 7861 1.562672 ATTAGCCTTGGCTGGACGGT 61.563 55.000 23.03 0.00 0.00 4.83
4376 7862 2.180159 TTAGCCTTGGCTGGACGGTC 62.180 60.000 23.03 0.00 0.00 4.79
4377 7863 4.021925 GCCTTGGCTGGACGGTCT 62.022 66.667 8.23 0.00 0.00 3.85
4378 7864 2.046892 CCTTGGCTGGACGGTCTG 60.047 66.667 8.23 2.96 0.00 3.51
4379 7865 2.743718 CTTGGCTGGACGGTCTGT 59.256 61.111 8.23 0.00 0.00 3.41
4380 7866 1.541310 CCTTGGCTGGACGGTCTGTA 61.541 60.000 8.23 0.00 0.00 2.74
4381 7867 0.389948 CTTGGCTGGACGGTCTGTAC 60.390 60.000 8.23 0.00 0.00 2.90
4382 7868 0.830444 TTGGCTGGACGGTCTGTACT 60.830 55.000 8.23 0.00 30.20 2.73
4383 7869 0.038599 TGGCTGGACGGTCTGTACTA 59.961 55.000 8.23 0.00 30.20 1.82
4384 7870 1.341679 TGGCTGGACGGTCTGTACTAT 60.342 52.381 8.23 0.00 30.20 2.12
4385 7871 2.092267 TGGCTGGACGGTCTGTACTATA 60.092 50.000 8.23 0.00 30.20 1.31
4386 7872 2.292845 GGCTGGACGGTCTGTACTATAC 59.707 54.545 8.23 0.00 30.20 1.47
4387 7873 3.212685 GCTGGACGGTCTGTACTATACT 58.787 50.000 8.23 0.00 30.20 2.12
4388 7874 3.003482 GCTGGACGGTCTGTACTATACTG 59.997 52.174 8.23 0.00 30.20 2.74
4389 7875 4.197750 CTGGACGGTCTGTACTATACTGT 58.802 47.826 8.23 6.90 35.46 3.55
4390 7876 5.357742 TGGACGGTCTGTACTATACTGTA 57.642 43.478 8.23 0.00 32.96 2.74
4391 7877 5.933617 TGGACGGTCTGTACTATACTGTAT 58.066 41.667 8.23 5.53 32.96 2.29
4392 7878 6.359804 TGGACGGTCTGTACTATACTGTATT 58.640 40.000 8.23 0.00 32.96 1.89
4393 7879 6.261603 TGGACGGTCTGTACTATACTGTATTG 59.738 42.308 8.23 6.67 32.96 1.90
4413 7899 8.580720 TGTATTGTTATTTGTATGTTTGCACCT 58.419 29.630 0.00 0.00 0.00 4.00
4433 8006 8.361139 TGCACCTTATCTCTATTTTAGCTCTAC 58.639 37.037 0.00 0.00 0.00 2.59
4451 8024 1.001764 CATGAGCCTTGGCTGGACA 60.002 57.895 19.84 11.19 0.00 4.02
4465 8038 3.431766 GGCTGGACATCCGTACTGTATTT 60.432 47.826 0.00 0.00 39.43 1.40
4474 8127 8.882415 ACATCCGTACTGTATTTTATTGGTAG 57.118 34.615 0.00 0.00 0.00 3.18
4523 8178 5.693769 AGTGTATGTATAGGGTTTGCTGT 57.306 39.130 0.00 0.00 0.00 4.40
4571 8263 3.961408 ACTACCCTATAACTGCACTCTGG 59.039 47.826 0.00 0.00 0.00 3.86
4572 8264 3.116096 ACCCTATAACTGCACTCTGGA 57.884 47.619 0.00 0.00 0.00 3.86
4577 8269 5.529060 CCCTATAACTGCACTCTGGATTTTC 59.471 44.000 0.00 0.00 0.00 2.29
4579 8271 2.550830 ACTGCACTCTGGATTTTCGT 57.449 45.000 0.00 0.00 0.00 3.85
4582 8336 2.414481 CTGCACTCTGGATTTTCGTGAG 59.586 50.000 0.00 0.00 0.00 3.51
4630 8384 4.119442 ACAGACTTGTTGTAAGACGTGT 57.881 40.909 0.00 0.00 32.28 4.49
4634 9298 2.168936 ACTTGTTGTAAGACGTGTCCCA 59.831 45.455 0.00 0.00 0.00 4.37
4653 9317 6.432472 TGTCCCAAAAAGCAAAAGTGAAATTT 59.568 30.769 0.00 0.00 0.00 1.82
4691 9360 8.722480 TTATGTCTACATGTGAGAAGAAATGG 57.278 34.615 9.11 0.00 37.15 3.16
4699 10894 8.868522 ACATGTGAGAAGAAATGGAGATTTTA 57.131 30.769 0.00 0.00 31.58 1.52
4708 10903 7.272144 AGAAATGGAGATTTTAGTACCCAGT 57.728 36.000 0.00 0.00 31.58 4.00
4713 10908 6.942976 TGGAGATTTTAGTACCCAGTAACTG 58.057 40.000 0.00 0.00 0.00 3.16
4738 10933 6.328641 AGCCAGTACAGGATAATAAGTACG 57.671 41.667 8.77 0.00 41.16 3.67
4792 10988 5.946377 GGACATGTAGAACAAGGGAGAAAAT 59.054 40.000 0.00 0.00 0.00 1.82
4804 11000 3.571401 AGGGAGAAAATTTGTGAGCAGTG 59.429 43.478 0.00 0.00 0.00 3.66
4806 11002 4.320788 GGGAGAAAATTTGTGAGCAGTGAG 60.321 45.833 0.00 0.00 0.00 3.51
4809 11005 6.069684 AGAAAATTTGTGAGCAGTGAGAAG 57.930 37.500 0.00 0.00 0.00 2.85
4820 11016 1.802960 CAGTGAGAAGCTGCGTTGATT 59.197 47.619 0.00 0.00 0.00 2.57
4821 11017 2.995939 CAGTGAGAAGCTGCGTTGATTA 59.004 45.455 0.00 0.00 0.00 1.75
4846 11042 5.316167 TGGGTCATATGATGGCAGATTTAC 58.684 41.667 9.02 0.00 36.36 2.01
4877 11073 5.308825 CATCCCAGAGTCAACACTAACTTT 58.691 41.667 0.00 0.00 30.63 2.66
4878 11074 4.703897 TCCCAGAGTCAACACTAACTTTG 58.296 43.478 0.00 0.00 30.63 2.77
4902 11164 5.357742 AATATGAAACCCAGCATTTTCCC 57.642 39.130 0.00 0.00 31.76 3.97
4903 11165 2.094100 TGAAACCCAGCATTTTCCCA 57.906 45.000 0.00 0.00 31.76 4.37
4982 11244 6.826231 TCACACAGTTAGAACATCCAAGAAAA 59.174 34.615 0.00 0.00 0.00 2.29
4986 11248 7.973388 CACAGTTAGAACATCCAAGAAAACAAA 59.027 33.333 0.00 0.00 0.00 2.83
4987 11249 7.973944 ACAGTTAGAACATCCAAGAAAACAAAC 59.026 33.333 0.00 0.00 0.00 2.93
4988 11250 8.190784 CAGTTAGAACATCCAAGAAAACAAACT 58.809 33.333 0.00 0.00 0.00 2.66
4989 11251 8.190784 AGTTAGAACATCCAAGAAAACAAACTG 58.809 33.333 0.00 0.00 0.00 3.16
4990 11252 6.773976 AGAACATCCAAGAAAACAAACTGA 57.226 33.333 0.00 0.00 0.00 3.41
4991 11253 7.169158 AGAACATCCAAGAAAACAAACTGAA 57.831 32.000 0.00 0.00 0.00 3.02
4992 11254 7.610865 AGAACATCCAAGAAAACAAACTGAAA 58.389 30.769 0.00 0.00 0.00 2.69
4993 11255 8.093927 AGAACATCCAAGAAAACAAACTGAAAA 58.906 29.630 0.00 0.00 0.00 2.29
5000 11265 8.603181 CCAAGAAAACAAACTGAAAAATGGTAG 58.397 33.333 0.00 0.00 0.00 3.18
5015 11280 8.587952 AAAAATGGTAGTAAAACAATGCTGAC 57.412 30.769 0.00 0.00 0.00 3.51
5035 11300 1.810030 GTAGGCGCTCCCTGTTTCG 60.810 63.158 7.64 0.00 45.91 3.46
5058 11323 3.443099 AGCAAACAAGCAAAAGGAGAC 57.557 42.857 0.00 0.00 36.85 3.36
5059 11324 2.760092 AGCAAACAAGCAAAAGGAGACA 59.240 40.909 0.00 0.00 36.85 3.41
5060 11325 3.385755 AGCAAACAAGCAAAAGGAGACAT 59.614 39.130 0.00 0.00 36.85 3.06
5061 11326 4.584325 AGCAAACAAGCAAAAGGAGACATA 59.416 37.500 0.00 0.00 36.85 2.29
5062 11327 5.244626 AGCAAACAAGCAAAAGGAGACATAT 59.755 36.000 0.00 0.00 36.85 1.78
5063 11328 5.574443 GCAAACAAGCAAAAGGAGACATATC 59.426 40.000 0.00 0.00 0.00 1.63
5064 11329 6.680810 CAAACAAGCAAAAGGAGACATATCA 58.319 36.000 0.00 0.00 0.00 2.15
5065 11330 7.318141 CAAACAAGCAAAAGGAGACATATCAT 58.682 34.615 0.00 0.00 0.00 2.45
5066 11331 8.461222 CAAACAAGCAAAAGGAGACATATCATA 58.539 33.333 0.00 0.00 0.00 2.15
5067 11332 8.757982 AACAAGCAAAAGGAGACATATCATAT 57.242 30.769 0.00 0.00 0.00 1.78
5068 11333 9.851686 AACAAGCAAAAGGAGACATATCATATA 57.148 29.630 0.00 0.00 0.00 0.86
5069 11334 9.851686 ACAAGCAAAAGGAGACATATCATATAA 57.148 29.630 0.00 0.00 0.00 0.98
5071 11336 9.512588 AAGCAAAAGGAGACATATCATATAAGG 57.487 33.333 0.00 0.00 0.00 2.69
5072 11337 8.884323 AGCAAAAGGAGACATATCATATAAGGA 58.116 33.333 0.00 0.00 0.00 3.36
5073 11338 9.678260 GCAAAAGGAGACATATCATATAAGGAT 57.322 33.333 0.00 0.00 0.00 3.24
5078 11343 9.645128 AGGAGACATATCATATAAGGATCTCTG 57.355 37.037 0.00 0.00 0.00 3.35
5079 11344 9.420118 GGAGACATATCATATAAGGATCTCTGT 57.580 37.037 0.00 0.00 0.00 3.41
5086 11351 7.365497 TCATATAAGGATCTCTGTTTCAGCA 57.635 36.000 0.00 0.00 0.00 4.41
5087 11352 7.795047 TCATATAAGGATCTCTGTTTCAGCAA 58.205 34.615 0.00 0.00 0.00 3.91
5088 11353 8.267183 TCATATAAGGATCTCTGTTTCAGCAAA 58.733 33.333 0.00 0.00 0.00 3.68
5089 11354 6.998968 ATAAGGATCTCTGTTTCAGCAAAG 57.001 37.500 0.00 0.00 0.00 2.77
5090 11355 3.080319 AGGATCTCTGTTTCAGCAAAGC 58.920 45.455 0.00 0.00 0.00 3.51
5091 11356 3.080319 GGATCTCTGTTTCAGCAAAGCT 58.920 45.455 0.00 0.00 40.77 3.74
5092 11357 4.019860 AGGATCTCTGTTTCAGCAAAGCTA 60.020 41.667 0.00 0.00 36.40 3.32
5093 11358 4.094146 GGATCTCTGTTTCAGCAAAGCTAC 59.906 45.833 0.00 0.00 36.40 3.58
5094 11359 3.403038 TCTCTGTTTCAGCAAAGCTACC 58.597 45.455 0.00 0.00 36.40 3.18
5095 11360 2.485814 CTCTGTTTCAGCAAAGCTACCC 59.514 50.000 0.00 0.00 36.40 3.69
5096 11361 1.541588 CTGTTTCAGCAAAGCTACCCC 59.458 52.381 0.00 0.00 36.40 4.95
5097 11362 0.888619 GTTTCAGCAAAGCTACCCCC 59.111 55.000 0.00 0.00 36.40 5.40
5098 11363 0.480690 TTTCAGCAAAGCTACCCCCA 59.519 50.000 0.00 0.00 36.40 4.96
5099 11364 0.038166 TTCAGCAAAGCTACCCCCAG 59.962 55.000 0.00 0.00 36.40 4.45
5100 11365 1.379044 CAGCAAAGCTACCCCCAGG 60.379 63.158 0.00 0.00 36.40 4.45
5101 11366 1.541368 AGCAAAGCTACCCCCAGGA 60.541 57.895 0.00 0.00 36.99 3.86
5102 11367 0.921256 AGCAAAGCTACCCCCAGGAT 60.921 55.000 0.00 0.00 36.99 3.24
5103 11368 0.033109 GCAAAGCTACCCCCAGGATT 60.033 55.000 0.00 0.00 36.73 3.01
5104 11369 1.214424 GCAAAGCTACCCCCAGGATTA 59.786 52.381 0.00 0.00 36.73 1.75
5105 11370 2.749800 GCAAAGCTACCCCCAGGATTAG 60.750 54.545 0.00 0.00 36.73 1.73
5106 11371 1.141185 AAGCTACCCCCAGGATTAGC 58.859 55.000 7.94 7.94 35.62 3.09
5107 11372 0.030092 AGCTACCCCCAGGATTAGCA 60.030 55.000 15.08 0.00 36.90 3.49
5108 11373 0.398318 GCTACCCCCAGGATTAGCAG 59.602 60.000 10.18 0.00 35.53 4.24
5109 11374 2.040144 GCTACCCCCAGGATTAGCAGA 61.040 57.143 10.18 0.00 35.53 4.26
5110 11375 1.974236 CTACCCCCAGGATTAGCAGAG 59.026 57.143 0.00 0.00 36.73 3.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 4.778143 ATGAGGGGTTGCGGCGAC 62.778 66.667 12.98 12.03 0.00 5.19
64 66 0.895100 TGCAGAACATGAGGGGTTGC 60.895 55.000 0.00 1.24 0.00 4.17
74 76 1.744368 CAGCTCGCCTGCAGAACAT 60.744 57.895 17.39 0.00 34.21 2.71
75 77 2.357881 CAGCTCGCCTGCAGAACA 60.358 61.111 17.39 0.00 34.21 3.18
94 96 3.547249 GACGGAGGCGTCGTTGTCA 62.547 63.158 15.67 0.00 41.22 3.58
156 208 1.473434 GCTCCCTCTACGTGAAATGGG 60.473 57.143 0.00 2.86 36.14 4.00
167 219 2.433604 CTGAATTGCTCTGCTCCCTCTA 59.566 50.000 0.00 0.00 0.00 2.43
169 221 1.209019 TCTGAATTGCTCTGCTCCCTC 59.791 52.381 0.00 0.00 0.00 4.30
197 249 3.309682 CACTGGTAAGGCACGTCATATTG 59.690 47.826 0.00 0.00 0.00 1.90
198 250 3.196901 TCACTGGTAAGGCACGTCATATT 59.803 43.478 0.00 0.00 0.00 1.28
212 285 3.146066 GTGATTTGTGCCTTCACTGGTA 58.854 45.455 0.00 0.00 43.49 3.25
367 442 5.291858 TGCATGCATACTTTTCTTCTAGTCG 59.708 40.000 18.46 0.00 0.00 4.18
462 1919 2.830186 TTACCGGCCACTCCCATTGC 62.830 60.000 0.00 0.00 0.00 3.56
534 2011 1.857965 TGCATGGCTCTCAGTACTCT 58.142 50.000 0.00 0.00 0.00 3.24
589 2124 7.230510 CACATCTAGCATTAAGGTCTAGAGAGT 59.769 40.741 18.90 16.98 41.19 3.24
670 2216 3.755628 CAGCCCACCATGCACAGC 61.756 66.667 0.00 0.00 0.00 4.40
671 2217 2.282674 ACAGCCCACCATGCACAG 60.283 61.111 0.00 0.00 0.00 3.66
672 2218 2.282391 GACAGCCCACCATGCACA 60.282 61.111 0.00 0.00 0.00 4.57
673 2219 3.064324 GGACAGCCCACCATGCAC 61.064 66.667 0.00 0.00 34.14 4.57
674 2220 4.720902 CGGACAGCCCACCATGCA 62.721 66.667 0.00 0.00 34.14 3.96
675 2221 3.918253 TTCGGACAGCCCACCATGC 62.918 63.158 0.00 0.00 34.14 4.06
676 2222 1.077501 ATTCGGACAGCCCACCATG 60.078 57.895 0.00 0.00 34.14 3.66
677 2223 1.224592 GATTCGGACAGCCCACCAT 59.775 57.895 0.00 0.00 34.14 3.55
678 2224 1.773856 TTGATTCGGACAGCCCACCA 61.774 55.000 0.00 0.00 34.14 4.17
679 2225 1.002624 TTGATTCGGACAGCCCACC 60.003 57.895 0.00 0.00 34.14 4.61
680 2226 0.605319 TGTTGATTCGGACAGCCCAC 60.605 55.000 0.00 0.00 34.14 4.61
681 2227 0.109532 TTGTTGATTCGGACAGCCCA 59.890 50.000 0.00 0.00 34.14 5.36
682 2228 1.243902 TTTGTTGATTCGGACAGCCC 58.756 50.000 0.00 0.00 0.00 5.19
683 2229 3.575965 AATTTGTTGATTCGGACAGCC 57.424 42.857 0.00 0.00 0.00 4.85
684 2230 4.148696 CACAAATTTGTTGATTCGGACAGC 59.851 41.667 21.10 0.00 39.91 4.40
685 2231 5.280945 ACACAAATTTGTTGATTCGGACAG 58.719 37.500 21.10 8.02 39.91 3.51
686 2232 5.255710 ACACAAATTTGTTGATTCGGACA 57.744 34.783 21.10 0.00 39.91 4.02
687 2233 7.867445 AATACACAAATTTGTTGATTCGGAC 57.133 32.000 21.10 0.00 39.91 4.79
688 2234 9.967346 TTAAATACACAAATTTGTTGATTCGGA 57.033 25.926 21.10 6.28 39.91 4.55
696 2242 9.981114 CCTCTTCCTTAAATACACAAATTTGTT 57.019 29.630 21.10 14.38 39.91 2.83
697 2243 8.585018 CCCTCTTCCTTAAATACACAAATTTGT 58.415 33.333 18.13 18.13 43.36 2.83
698 2244 8.802267 TCCCTCTTCCTTAAATACACAAATTTG 58.198 33.333 16.67 16.67 31.63 2.32
699 2245 8.950007 TCCCTCTTCCTTAAATACACAAATTT 57.050 30.769 0.00 0.00 33.69 1.82
700 2246 7.615757 CCTCCCTCTTCCTTAAATACACAAATT 59.384 37.037 0.00 0.00 0.00 1.82
701 2247 7.119387 CCTCCCTCTTCCTTAAATACACAAAT 58.881 38.462 0.00 0.00 0.00 2.32
702 2248 6.481643 CCTCCCTCTTCCTTAAATACACAAA 58.518 40.000 0.00 0.00 0.00 2.83
703 2249 5.045140 CCCTCCCTCTTCCTTAAATACACAA 60.045 44.000 0.00 0.00 0.00 3.33
704 2250 4.473559 CCCTCCCTCTTCCTTAAATACACA 59.526 45.833 0.00 0.00 0.00 3.72
705 2251 4.141459 CCCCTCCCTCTTCCTTAAATACAC 60.141 50.000 0.00 0.00 0.00 2.90
706 2252 4.045022 CCCCTCCCTCTTCCTTAAATACA 58.955 47.826 0.00 0.00 0.00 2.29
707 2253 4.045736 ACCCCTCCCTCTTCCTTAAATAC 58.954 47.826 0.00 0.00 0.00 1.89
708 2254 4.379263 ACCCCTCCCTCTTCCTTAAATA 57.621 45.455 0.00 0.00 0.00 1.40
709 2255 3.237942 ACCCCTCCCTCTTCCTTAAAT 57.762 47.619 0.00 0.00 0.00 1.40
710 2256 2.647802 CAACCCCTCCCTCTTCCTTAAA 59.352 50.000 0.00 0.00 0.00 1.52
711 2257 2.275466 CAACCCCTCCCTCTTCCTTAA 58.725 52.381 0.00 0.00 0.00 1.85
712 2258 1.966845 CAACCCCTCCCTCTTCCTTA 58.033 55.000 0.00 0.00 0.00 2.69
713 2259 1.501654 GCAACCCCTCCCTCTTCCTT 61.502 60.000 0.00 0.00 0.00 3.36
714 2260 1.925972 GCAACCCCTCCCTCTTCCT 60.926 63.158 0.00 0.00 0.00 3.36
715 2261 0.620700 TAGCAACCCCTCCCTCTTCC 60.621 60.000 0.00 0.00 0.00 3.46
716 2262 0.833949 CTAGCAACCCCTCCCTCTTC 59.166 60.000 0.00 0.00 0.00 2.87
717 2263 0.417841 TCTAGCAACCCCTCCCTCTT 59.582 55.000 0.00 0.00 0.00 2.85
718 2264 0.644937 ATCTAGCAACCCCTCCCTCT 59.355 55.000 0.00 0.00 0.00 3.69
719 2265 0.761802 CATCTAGCAACCCCTCCCTC 59.238 60.000 0.00 0.00 0.00 4.30
720 2266 0.044855 ACATCTAGCAACCCCTCCCT 59.955 55.000 0.00 0.00 0.00 4.20
721 2267 0.181350 CACATCTAGCAACCCCTCCC 59.819 60.000 0.00 0.00 0.00 4.30
722 2268 0.912486 ACACATCTAGCAACCCCTCC 59.088 55.000 0.00 0.00 0.00 4.30
723 2269 1.834263 AGACACATCTAGCAACCCCTC 59.166 52.381 0.00 0.00 31.46 4.30
724 2270 1.556911 CAGACACATCTAGCAACCCCT 59.443 52.381 0.00 0.00 32.25 4.79
725 2271 1.555075 TCAGACACATCTAGCAACCCC 59.445 52.381 0.00 0.00 32.25 4.95
726 2272 2.497675 TCTCAGACACATCTAGCAACCC 59.502 50.000 0.00 0.00 32.25 4.11
727 2273 3.876274 TCTCAGACACATCTAGCAACC 57.124 47.619 0.00 0.00 32.25 3.77
728 2274 5.042593 CAGATCTCAGACACATCTAGCAAC 58.957 45.833 0.00 0.00 32.25 4.17
729 2275 4.952335 TCAGATCTCAGACACATCTAGCAA 59.048 41.667 0.00 0.00 32.25 3.91
730 2276 4.337836 GTCAGATCTCAGACACATCTAGCA 59.662 45.833 8.04 0.00 33.29 3.49
731 2277 4.337836 TGTCAGATCTCAGACACATCTAGC 59.662 45.833 10.93 0.00 37.44 3.42
739 2285 4.039609 ACATTGTGTGTCAGATCTCAGACA 59.960 41.667 10.93 10.93 39.55 3.41
740 2286 4.388165 CACATTGTGTGTCAGATCTCAGAC 59.612 45.833 8.69 6.30 43.08 3.51
741 2287 4.563061 CACATTGTGTGTCAGATCTCAGA 58.437 43.478 8.69 0.00 43.08 3.27
742 2288 4.923264 CACATTGTGTGTCAGATCTCAG 57.077 45.455 8.69 0.00 43.08 3.35
780 2326 6.426587 AGTTGGAGCTGTAATTTGTATCCAT 58.573 36.000 0.00 0.00 35.42 3.41
789 2339 3.084786 GGCAGAAGTTGGAGCTGTAATT 58.915 45.455 0.00 0.00 32.39 1.40
832 2382 5.076182 TGTGGCTAGAATTTGTTGATTGGA 58.924 37.500 0.00 0.00 0.00 3.53
905 2473 3.573695 ACCGCAGTATAGGAGTATGGTT 58.426 45.455 0.00 0.00 0.00 3.67
939 2674 5.295950 GCAGAGCAGCTTATCTCTTATTCA 58.704 41.667 0.00 0.00 37.56 2.57
946 2681 2.415776 GATGGCAGAGCAGCTTATCTC 58.584 52.381 0.00 0.00 34.17 2.75
947 2682 1.072015 GGATGGCAGAGCAGCTTATCT 59.928 52.381 0.00 0.00 32.56 1.98
948 2683 1.202734 TGGATGGCAGAGCAGCTTATC 60.203 52.381 0.00 0.00 34.17 1.75
949 2684 0.841961 TGGATGGCAGAGCAGCTTAT 59.158 50.000 0.00 0.00 34.17 1.73
950 2685 0.841961 ATGGATGGCAGAGCAGCTTA 59.158 50.000 0.00 0.00 34.17 3.09
952 2687 0.465824 GAATGGATGGCAGAGCAGCT 60.466 55.000 0.00 0.00 34.17 4.24
953 2688 0.465824 AGAATGGATGGCAGAGCAGC 60.466 55.000 0.00 0.00 0.00 5.25
954 2689 1.595466 GAGAATGGATGGCAGAGCAG 58.405 55.000 0.00 0.00 0.00 4.24
955 2690 0.182061 GGAGAATGGATGGCAGAGCA 59.818 55.000 0.00 0.00 0.00 4.26
959 2694 2.305009 GGAAAGGAGAATGGATGGCAG 58.695 52.381 0.00 0.00 0.00 4.85
961 2696 2.442236 TGGAAAGGAGAATGGATGGC 57.558 50.000 0.00 0.00 0.00 4.40
963 2698 3.144506 CGGATGGAAAGGAGAATGGATG 58.855 50.000 0.00 0.00 0.00 3.51
1221 2971 0.392461 GATGGCCCGTTCTGTTGCTA 60.392 55.000 0.00 0.00 0.00 3.49
1285 3044 3.349927 TGTAGCTGTAGTCGTACATGGT 58.650 45.455 0.00 0.00 38.51 3.55
1303 3152 5.935789 GGTAGCTGTAGTCAACCATTTTGTA 59.064 40.000 0.00 0.00 0.00 2.41
1304 3153 4.760204 GGTAGCTGTAGTCAACCATTTTGT 59.240 41.667 0.00 0.00 0.00 2.83
1305 3154 4.156008 GGGTAGCTGTAGTCAACCATTTTG 59.844 45.833 0.00 0.00 31.58 2.44
1306 3155 4.332828 GGGTAGCTGTAGTCAACCATTTT 58.667 43.478 0.00 0.00 31.58 1.82
1307 3156 3.618997 CGGGTAGCTGTAGTCAACCATTT 60.619 47.826 0.00 0.00 31.58 2.32
1308 3157 2.093658 CGGGTAGCTGTAGTCAACCATT 60.094 50.000 0.00 0.00 31.58 3.16
1309 3158 1.480954 CGGGTAGCTGTAGTCAACCAT 59.519 52.381 0.00 0.00 31.58 3.55
1310 3159 0.892755 CGGGTAGCTGTAGTCAACCA 59.107 55.000 0.00 0.00 31.58 3.67
1311 3160 1.180029 TCGGGTAGCTGTAGTCAACC 58.820 55.000 0.00 0.00 0.00 3.77
1312 3161 2.230750 AGTTCGGGTAGCTGTAGTCAAC 59.769 50.000 0.00 0.00 0.00 3.18
1313 3162 2.230508 CAGTTCGGGTAGCTGTAGTCAA 59.769 50.000 0.00 0.00 32.12 3.18
1314 3163 1.816835 CAGTTCGGGTAGCTGTAGTCA 59.183 52.381 0.00 0.00 32.12 3.41
1333 3182 2.026542 ACAAGCTCAATGATCTGCTCCA 60.027 45.455 0.00 0.00 34.38 3.86
1583 3447 5.538813 AGATCCACTATGTAAGGCGTATTCA 59.461 40.000 0.00 0.00 0.00 2.57
1589 3453 2.802816 GCAAGATCCACTATGTAAGGCG 59.197 50.000 0.00 0.00 0.00 5.52
1631 3495 2.349590 TCATGTCAAGATGCCTCAACG 58.650 47.619 0.00 0.00 0.00 4.10
1658 3522 2.165234 TCTCTCGCAGAACCAAGATCAG 59.835 50.000 0.00 0.00 34.09 2.90
1659 3523 2.171003 TCTCTCGCAGAACCAAGATCA 58.829 47.619 0.00 0.00 34.09 2.92
1677 3541 6.038271 GCATATTAACACTCCGAAACCAATCT 59.962 38.462 0.00 0.00 0.00 2.40
1688 3552 6.587273 AGAGAAGGAAGCATATTAACACTCC 58.413 40.000 0.00 0.00 0.00 3.85
1692 3556 9.959721 ACTTTAAGAGAAGGAAGCATATTAACA 57.040 29.630 0.00 0.00 0.00 2.41
1723 3587 2.112297 TCCACAACCGGACAAGCC 59.888 61.111 9.46 0.00 0.00 4.35
2206 4958 3.625211 GCTCCAACTCCTACAGGTAGAGA 60.625 52.174 8.01 3.42 35.21 3.10
2309 5286 5.568685 GAGGTCCAAAAGCTCTAATTTCC 57.431 43.478 0.00 0.00 46.81 3.13
2318 5295 0.538287 GTGGCTGAGGTCCAAAAGCT 60.538 55.000 9.53 0.00 38.79 3.74
2319 5296 0.823356 TGTGGCTGAGGTCCAAAAGC 60.823 55.000 0.00 0.00 35.01 3.51
2320 5297 1.691196 TTGTGGCTGAGGTCCAAAAG 58.309 50.000 0.00 0.00 35.01 2.27
2321 5298 2.380064 ATTGTGGCTGAGGTCCAAAA 57.620 45.000 0.00 0.00 35.45 2.44
2322 5299 3.153919 GTTATTGTGGCTGAGGTCCAAA 58.846 45.455 0.00 0.00 35.01 3.28
2323 5300 2.375174 AGTTATTGTGGCTGAGGTCCAA 59.625 45.455 0.00 0.00 35.01 3.53
2324 5301 1.985159 AGTTATTGTGGCTGAGGTCCA 59.015 47.619 0.00 0.00 0.00 4.02
2325 5302 2.789409 AGTTATTGTGGCTGAGGTCC 57.211 50.000 0.00 0.00 0.00 4.46
2326 5303 3.674997 TGAAGTTATTGTGGCTGAGGTC 58.325 45.455 0.00 0.00 0.00 3.85
2327 5304 3.788227 TGAAGTTATTGTGGCTGAGGT 57.212 42.857 0.00 0.00 0.00 3.85
2328 5305 3.120199 CGTTGAAGTTATTGTGGCTGAGG 60.120 47.826 0.00 0.00 0.00 3.86
2329 5306 3.120199 CCGTTGAAGTTATTGTGGCTGAG 60.120 47.826 0.00 0.00 0.00 3.35
2330 5307 2.811431 CCGTTGAAGTTATTGTGGCTGA 59.189 45.455 0.00 0.00 0.00 4.26
2331 5308 2.552315 ACCGTTGAAGTTATTGTGGCTG 59.448 45.455 0.00 0.00 0.00 4.85
2332 5309 2.552315 CACCGTTGAAGTTATTGTGGCT 59.448 45.455 0.00 0.00 0.00 4.75
2333 5310 2.292292 ACACCGTTGAAGTTATTGTGGC 59.708 45.455 0.00 0.00 0.00 5.01
2334 5311 3.851838 GCACACCGTTGAAGTTATTGTGG 60.852 47.826 0.00 0.00 34.70 4.17
2335 5312 3.003275 AGCACACCGTTGAAGTTATTGTG 59.997 43.478 0.00 0.00 36.72 3.33
2336 5313 3.211045 AGCACACCGTTGAAGTTATTGT 58.789 40.909 0.00 0.00 0.00 2.71
2337 5314 3.896648 AGCACACCGTTGAAGTTATTG 57.103 42.857 0.00 0.00 0.00 1.90
2338 5315 4.911514 AAAGCACACCGTTGAAGTTATT 57.088 36.364 0.00 0.00 0.00 1.40
2339 5316 4.336993 TCAAAAGCACACCGTTGAAGTTAT 59.663 37.500 0.00 0.00 0.00 1.89
2340 5317 3.690139 TCAAAAGCACACCGTTGAAGTTA 59.310 39.130 0.00 0.00 0.00 2.24
2341 5318 2.490115 TCAAAAGCACACCGTTGAAGTT 59.510 40.909 0.00 0.00 0.00 2.66
2342 5319 2.088423 TCAAAAGCACACCGTTGAAGT 58.912 42.857 0.00 0.00 0.00 3.01
2343 5320 2.842208 TCAAAAGCACACCGTTGAAG 57.158 45.000 0.00 0.00 0.00 3.02
2344 5321 3.191581 TCTTTCAAAAGCACACCGTTGAA 59.808 39.130 0.00 0.00 38.01 2.69
2345 5322 2.750166 TCTTTCAAAAGCACACCGTTGA 59.250 40.909 0.00 0.00 35.99 3.18
2346 5323 3.143807 TCTTTCAAAAGCACACCGTTG 57.856 42.857 0.00 0.00 35.99 4.10
2347 5324 3.057174 TGTTCTTTCAAAAGCACACCGTT 60.057 39.130 4.22 0.00 37.27 4.44
2348 5325 2.490115 TGTTCTTTCAAAAGCACACCGT 59.510 40.909 4.22 0.00 37.27 4.83
2349 5326 3.143807 TGTTCTTTCAAAAGCACACCG 57.856 42.857 4.22 0.00 37.27 4.94
2350 5327 5.276348 CGAATTGTTCTTTCAAAAGCACACC 60.276 40.000 7.34 1.35 40.81 4.16
2351 5328 5.717251 CGAATTGTTCTTTCAAAAGCACAC 58.283 37.500 7.34 1.41 40.81 3.82
2352 5329 4.267452 GCGAATTGTTCTTTCAAAAGCACA 59.733 37.500 4.22 4.22 39.71 4.57
2353 5330 4.267452 TGCGAATTGTTCTTTCAAAAGCAC 59.733 37.500 0.00 0.00 35.99 4.40
2354 5331 4.428209 TGCGAATTGTTCTTTCAAAAGCA 58.572 34.783 0.00 0.00 35.99 3.91
2355 5332 5.388225 TTGCGAATTGTTCTTTCAAAAGC 57.612 34.783 0.00 0.00 35.99 3.51
2356 5333 8.825064 AAATTTGCGAATTGTTCTTTCAAAAG 57.175 26.923 12.74 0.00 35.69 2.27
2357 5334 9.913451 CTAAATTTGCGAATTGTTCTTTCAAAA 57.087 25.926 12.74 0.00 35.69 2.44
2358 5335 8.547069 CCTAAATTTGCGAATTGTTCTTTCAAA 58.453 29.630 12.74 0.00 35.69 2.69
2359 5336 7.170658 CCCTAAATTTGCGAATTGTTCTTTCAA 59.829 33.333 12.74 0.00 35.69 2.69
2360 5337 6.644592 CCCTAAATTTGCGAATTGTTCTTTCA 59.355 34.615 12.74 0.00 35.69 2.69
2361 5338 6.866248 TCCCTAAATTTGCGAATTGTTCTTTC 59.134 34.615 12.74 0.00 35.69 2.62
2362 5339 6.754193 TCCCTAAATTTGCGAATTGTTCTTT 58.246 32.000 12.74 0.00 35.69 2.52
2363 5340 6.339587 TCCCTAAATTTGCGAATTGTTCTT 57.660 33.333 12.74 0.00 35.69 2.52
2364 5341 5.975693 TCCCTAAATTTGCGAATTGTTCT 57.024 34.783 12.74 0.00 35.69 3.01
2365 5342 7.595311 ATTTCCCTAAATTTGCGAATTGTTC 57.405 32.000 12.74 0.00 35.69 3.18
2366 5343 7.977789 AATTTCCCTAAATTTGCGAATTGTT 57.022 28.000 12.74 0.95 41.50 2.83
2367 5344 8.527810 TCTAATTTCCCTAAATTTGCGAATTGT 58.472 29.630 12.74 6.11 41.50 2.71
2368 5345 8.925161 TCTAATTTCCCTAAATTTGCGAATTG 57.075 30.769 12.74 1.53 41.50 2.32
2369 5346 7.706607 GCTCTAATTTCCCTAAATTTGCGAATT 59.293 33.333 6.06 6.06 41.50 2.17
2370 5347 7.068716 AGCTCTAATTTCCCTAAATTTGCGAAT 59.931 33.333 0.00 0.00 41.50 3.34
2371 5348 6.377146 AGCTCTAATTTCCCTAAATTTGCGAA 59.623 34.615 0.00 0.00 41.50 4.70
2372 5349 5.885912 AGCTCTAATTTCCCTAAATTTGCGA 59.114 36.000 0.00 0.00 41.50 5.10
2373 5350 6.136541 AGCTCTAATTTCCCTAAATTTGCG 57.863 37.500 0.00 0.00 41.50 4.85
2374 5351 8.659491 CAAAAGCTCTAATTTCCCTAAATTTGC 58.341 33.333 0.00 5.16 41.50 3.68
2375 5352 9.154847 CCAAAAGCTCTAATTTCCCTAAATTTG 57.845 33.333 0.00 1.11 41.50 2.32
2376 5353 9.100197 TCCAAAAGCTCTAATTTCCCTAAATTT 57.900 29.630 0.00 0.00 41.50 1.82
2377 5354 8.531982 GTCCAAAAGCTCTAATTTCCCTAAATT 58.468 33.333 0.00 0.00 45.21 1.82
2378 5355 7.124298 GGTCCAAAAGCTCTAATTTCCCTAAAT 59.876 37.037 0.00 0.00 36.87 1.40
2379 5356 6.436218 GGTCCAAAAGCTCTAATTTCCCTAAA 59.564 38.462 0.00 0.00 0.00 1.85
2380 5357 5.949952 GGTCCAAAAGCTCTAATTTCCCTAA 59.050 40.000 0.00 0.00 0.00 2.69
2381 5358 5.253096 AGGTCCAAAAGCTCTAATTTCCCTA 59.747 40.000 0.00 0.00 0.00 3.53
2382 5359 4.044698 AGGTCCAAAAGCTCTAATTTCCCT 59.955 41.667 0.00 0.00 0.00 4.20
2383 5360 4.344978 AGGTCCAAAAGCTCTAATTTCCC 58.655 43.478 0.00 0.00 0.00 3.97
2429 5631 7.212274 ACTTGCAAAATGTTCTTTCAATAGCT 58.788 30.769 0.00 0.00 0.00 3.32
2471 5955 7.918562 TGAAGTTATTGCAACTAAGGTTCAAAC 59.081 33.333 0.00 0.00 32.73 2.93
2476 5960 6.016276 CCACTGAAGTTATTGCAACTAAGGTT 60.016 38.462 0.00 0.00 35.86 3.50
2529 6013 5.401376 GTCCAAAAGATTTAAGTTGCCGAAC 59.599 40.000 0.00 0.00 0.00 3.95
2532 6016 4.022329 AGGTCCAAAAGATTTAAGTTGCCG 60.022 41.667 0.00 0.00 0.00 5.69
2544 6028 4.640771 ATTACTGCTGAGGTCCAAAAGA 57.359 40.909 0.00 0.00 0.00 2.52
2930 6414 6.014242 TGGTATTGACCCATGCAATTTGTTTA 60.014 34.615 0.00 0.00 46.32 2.01
3106 6592 3.247648 GCAAGCAACAACTCTTCGAGTAA 59.752 43.478 0.00 0.00 42.59 2.24
3230 6716 2.459934 GAACAAGTTCCTTTTGGCACG 58.540 47.619 1.51 0.00 40.74 5.34
3624 7110 4.447138 TTGGTCCTTTGTGATTACTGGT 57.553 40.909 0.00 0.00 0.00 4.00
3716 7202 4.430441 AGTTATCTCCTCTGGAACCTGTT 58.570 43.478 0.00 0.00 0.00 3.16
3801 7287 5.806654 ACTGCCTTAAATCACCAATTTGT 57.193 34.783 0.00 0.00 38.08 2.83
4001 7487 3.875369 GCCAACAGGATCTCCACAAAGAT 60.875 47.826 0.00 0.00 38.72 2.40
4108 7594 1.478471 CCACAGACCCACCACAAATCA 60.478 52.381 0.00 0.00 0.00 2.57
4179 7665 7.093992 TGTCGTACATCATATCAACAAACTGA 58.906 34.615 0.00 0.00 0.00 3.41
4215 7701 1.742411 GCGCACCTTATAGCCACTTGA 60.742 52.381 0.30 0.00 0.00 3.02
4233 7719 3.005554 AGTTTTCTCCATCATGTGAGCG 58.994 45.455 0.00 0.00 0.00 5.03
4329 7815 9.944376 TTAGAGCTGAAAATATGGATATGGTAC 57.056 33.333 0.00 0.00 0.00 3.34
4336 7822 9.018582 GGCTAATTTAGAGCTGAAAATATGGAT 57.981 33.333 7.63 0.00 39.98 3.41
4337 7823 8.220559 AGGCTAATTTAGAGCTGAAAATATGGA 58.779 33.333 7.63 0.00 39.98 3.41
4338 7824 8.401490 AGGCTAATTTAGAGCTGAAAATATGG 57.599 34.615 7.63 0.00 39.98 2.74
4339 7825 9.674824 CAAGGCTAATTTAGAGCTGAAAATATG 57.325 33.333 7.63 0.00 39.98 1.78
4340 7826 8.854117 CCAAGGCTAATTTAGAGCTGAAAATAT 58.146 33.333 7.63 0.00 39.98 1.28
4341 7827 7.201821 GCCAAGGCTAATTTAGAGCTGAAAATA 60.202 37.037 7.63 0.00 39.98 1.40
4342 7828 6.406288 GCCAAGGCTAATTTAGAGCTGAAAAT 60.406 38.462 7.63 0.00 39.98 1.82
4343 7829 5.105756 GCCAAGGCTAATTTAGAGCTGAAAA 60.106 40.000 7.63 0.00 39.98 2.29
4344 7830 4.399303 GCCAAGGCTAATTTAGAGCTGAAA 59.601 41.667 7.63 0.00 39.98 2.69
4345 7831 3.947834 GCCAAGGCTAATTTAGAGCTGAA 59.052 43.478 7.63 0.00 39.98 3.02
4346 7832 3.545703 GCCAAGGCTAATTTAGAGCTGA 58.454 45.455 7.63 0.00 39.98 4.26
4347 7833 3.978718 GCCAAGGCTAATTTAGAGCTG 57.021 47.619 7.63 0.94 39.98 4.24
4360 7846 4.021925 AGACCGTCCAGCCAAGGC 62.022 66.667 2.02 2.02 42.33 4.35
4361 7847 1.541310 TACAGACCGTCCAGCCAAGG 61.541 60.000 0.00 0.00 0.00 3.61
4362 7848 0.389948 GTACAGACCGTCCAGCCAAG 60.390 60.000 0.00 0.00 0.00 3.61
4363 7849 0.830444 AGTACAGACCGTCCAGCCAA 60.830 55.000 0.00 0.00 0.00 4.52
4364 7850 0.038599 TAGTACAGACCGTCCAGCCA 59.961 55.000 0.00 0.00 0.00 4.75
4365 7851 1.400737 ATAGTACAGACCGTCCAGCC 58.599 55.000 0.00 0.00 0.00 4.85
4366 7852 3.003482 CAGTATAGTACAGACCGTCCAGC 59.997 52.174 0.00 0.00 0.00 4.85
4367 7853 4.197750 ACAGTATAGTACAGACCGTCCAG 58.802 47.826 0.00 0.00 0.00 3.86
4368 7854 4.226427 ACAGTATAGTACAGACCGTCCA 57.774 45.455 0.00 0.00 0.00 4.02
4369 7855 6.261826 ACAATACAGTATAGTACAGACCGTCC 59.738 42.308 0.00 0.00 0.00 4.79
4370 7856 7.256756 ACAATACAGTATAGTACAGACCGTC 57.743 40.000 0.00 0.00 0.00 4.79
4371 7857 7.636150 AACAATACAGTATAGTACAGACCGT 57.364 36.000 0.00 0.00 0.00 4.83
4385 7871 9.405587 GTGCAAACATACAAATAACAATACAGT 57.594 29.630 0.00 0.00 0.00 3.55
4386 7872 8.859156 GGTGCAAACATACAAATAACAATACAG 58.141 33.333 0.00 0.00 0.00 2.74
4387 7873 8.580720 AGGTGCAAACATACAAATAACAATACA 58.419 29.630 0.00 0.00 0.00 2.29
4388 7874 8.980143 AGGTGCAAACATACAAATAACAATAC 57.020 30.769 0.00 0.00 0.00 1.89
4391 7877 9.632807 GATAAGGTGCAAACATACAAATAACAA 57.367 29.630 0.00 0.00 0.00 2.83
4392 7878 9.019656 AGATAAGGTGCAAACATACAAATAACA 57.980 29.630 0.00 0.00 0.00 2.41
4393 7879 9.503427 GAGATAAGGTGCAAACATACAAATAAC 57.497 33.333 0.00 0.00 0.00 1.89
4451 8024 9.321562 CAACTACCAATAAAATACAGTACGGAT 57.678 33.333 0.00 0.00 0.00 4.18
4513 8168 4.923281 CAGCTTAAACAATACAGCAAACCC 59.077 41.667 0.00 0.00 34.49 4.11
4515 8170 7.138736 TCTTCAGCTTAAACAATACAGCAAAC 58.861 34.615 0.00 0.00 34.49 2.93
4547 8239 5.597182 CCAGAGTGCAGTTATAGGGTAGTAA 59.403 44.000 0.00 0.00 0.00 2.24
4571 8263 4.095483 ACAGATGGCATTCTCACGAAAATC 59.905 41.667 0.00 0.00 31.91 2.17
4572 8264 4.012374 ACAGATGGCATTCTCACGAAAAT 58.988 39.130 0.00 0.00 31.91 1.82
4577 8269 1.399440 CCAACAGATGGCATTCTCACG 59.601 52.381 0.00 0.00 43.80 4.35
4590 8344 2.040947 TGTTCACATATGGGCCAACAGA 59.959 45.455 11.89 1.44 0.00 3.41
4600 8354 8.223769 GTCTTACAACAAGTCTGTTCACATATG 58.776 37.037 0.00 0.00 44.15 1.78
4620 8374 2.614983 TGCTTTTTGGGACACGTCTTAC 59.385 45.455 0.00 0.00 39.29 2.34
4621 8375 2.920524 TGCTTTTTGGGACACGTCTTA 58.079 42.857 0.00 0.00 39.29 2.10
4622 8376 1.757682 TGCTTTTTGGGACACGTCTT 58.242 45.000 0.00 0.00 39.29 3.01
4624 8378 2.570442 TTTGCTTTTTGGGACACGTC 57.430 45.000 0.00 0.00 39.29 4.34
4625 8379 2.232696 ACTTTTGCTTTTTGGGACACGT 59.767 40.909 0.00 0.00 39.29 4.49
4626 8380 2.602660 CACTTTTGCTTTTTGGGACACG 59.397 45.455 0.00 0.00 39.29 4.49
4627 8381 3.855858 TCACTTTTGCTTTTTGGGACAC 58.144 40.909 0.00 0.00 39.29 3.67
4628 8382 4.543590 TTCACTTTTGCTTTTTGGGACA 57.456 36.364 0.00 0.00 0.00 4.02
4629 8383 6.435430 AATTTCACTTTTGCTTTTTGGGAC 57.565 33.333 0.00 0.00 0.00 4.46
4630 8384 8.043710 TCTAAATTTCACTTTTGCTTTTTGGGA 58.956 29.630 0.00 0.00 0.00 4.37
4668 9337 6.950842 TCCATTTCTTCTCACATGTAGACAT 58.049 36.000 0.00 0.00 36.96 3.06
4669 9338 6.211384 TCTCCATTTCTTCTCACATGTAGACA 59.789 38.462 0.00 0.00 0.00 3.41
4670 9339 6.634805 TCTCCATTTCTTCTCACATGTAGAC 58.365 40.000 0.00 0.00 0.00 2.59
4671 9340 6.857437 TCTCCATTTCTTCTCACATGTAGA 57.143 37.500 0.00 0.00 0.00 2.59
4673 9342 8.868522 AAAATCTCCATTTCTTCTCACATGTA 57.131 30.769 0.00 0.00 30.37 2.29
4674 9343 7.771927 AAAATCTCCATTTCTTCTCACATGT 57.228 32.000 0.00 0.00 30.37 3.21
4675 9344 8.954350 ACTAAAATCTCCATTTCTTCTCACATG 58.046 33.333 0.00 0.00 30.37 3.21
4677 9346 9.436957 GTACTAAAATCTCCATTTCTTCTCACA 57.563 33.333 0.00 0.00 30.37 3.58
4680 9349 8.047310 TGGGTACTAAAATCTCCATTTCTTCTC 58.953 37.037 0.00 0.00 30.37 2.87
4681 9350 7.928873 TGGGTACTAAAATCTCCATTTCTTCT 58.071 34.615 0.00 0.00 30.37 2.85
4683 9352 7.699878 ACTGGGTACTAAAATCTCCATTTCTT 58.300 34.615 0.00 0.00 30.37 2.52
4684 9353 7.272144 ACTGGGTACTAAAATCTCCATTTCT 57.728 36.000 0.00 0.00 30.37 2.52
4685 9354 8.890718 GTTACTGGGTACTAAAATCTCCATTTC 58.109 37.037 0.00 0.00 30.37 2.17
4686 9355 8.612145 AGTTACTGGGTACTAAAATCTCCATTT 58.388 33.333 0.00 0.00 33.27 2.32
4688 9357 7.402071 TCAGTTACTGGGTACTAAAATCTCCAT 59.598 37.037 12.79 0.00 31.51 3.41
4690 9359 7.179076 TCAGTTACTGGGTACTAAAATCTCC 57.821 40.000 12.79 0.00 31.51 3.71
4691 9360 7.278203 GCTTCAGTTACTGGGTACTAAAATCTC 59.722 40.741 12.79 0.00 31.51 2.75
4699 10894 2.567615 CTGGCTTCAGTTACTGGGTACT 59.432 50.000 12.79 0.00 33.96 2.73
4713 10908 6.862090 CGTACTTATTATCCTGTACTGGCTTC 59.138 42.308 13.72 0.00 34.75 3.86
4731 10926 9.793252 CCAGCTAATTTTTACTACTCGTACTTA 57.207 33.333 0.00 0.00 0.00 2.24
4792 10988 2.216046 CAGCTTCTCACTGCTCACAAA 58.784 47.619 0.00 0.00 37.44 2.83
4804 11000 2.349886 CCAGTAATCAACGCAGCTTCTC 59.650 50.000 0.00 0.00 0.00 2.87
4806 11002 1.398390 CCCAGTAATCAACGCAGCTTC 59.602 52.381 0.00 0.00 0.00 3.86
4809 11005 0.727398 GACCCAGTAATCAACGCAGC 59.273 55.000 0.00 0.00 0.00 5.25
4820 11016 3.586429 TCTGCCATCATATGACCCAGTA 58.414 45.455 20.01 10.43 0.00 2.74
4821 11017 2.411583 TCTGCCATCATATGACCCAGT 58.588 47.619 20.01 0.74 0.00 4.00
4846 11042 9.360911 TAGTGTTGACTCTGGGATGGTACAAAG 62.361 44.444 0.00 0.00 36.04 2.77
4877 11073 6.127196 GGGAAAATGCTGGGTTTCATATTACA 60.127 38.462 0.00 0.00 35.80 2.41
4878 11074 6.127196 TGGGAAAATGCTGGGTTTCATATTAC 60.127 38.462 0.00 0.00 35.80 1.89
4885 11137 1.276138 CCTGGGAAAATGCTGGGTTTC 59.724 52.381 0.00 0.00 33.78 2.78
4889 11141 0.252193 TTCCCTGGGAAAATGCTGGG 60.252 55.000 25.68 0.00 38.93 4.45
4902 11164 2.098117 GCAGTTCATCCGATTTTCCCTG 59.902 50.000 0.00 0.00 0.00 4.45
4903 11165 2.290896 TGCAGTTCATCCGATTTTCCCT 60.291 45.455 0.00 0.00 0.00 4.20
4982 11244 9.930693 TTGTTTTACTACCATTTTTCAGTTTGT 57.069 25.926 0.00 0.00 0.00 2.83
4986 11248 8.421002 AGCATTGTTTTACTACCATTTTTCAGT 58.579 29.630 0.00 0.00 0.00 3.41
4987 11249 8.702438 CAGCATTGTTTTACTACCATTTTTCAG 58.298 33.333 0.00 0.00 0.00 3.02
4988 11250 8.417106 TCAGCATTGTTTTACTACCATTTTTCA 58.583 29.630 0.00 0.00 0.00 2.69
4989 11251 8.699749 GTCAGCATTGTTTTACTACCATTTTTC 58.300 33.333 0.00 0.00 0.00 2.29
4990 11252 8.200792 TGTCAGCATTGTTTTACTACCATTTTT 58.799 29.630 0.00 0.00 0.00 1.94
4991 11253 7.721402 TGTCAGCATTGTTTTACTACCATTTT 58.279 30.769 0.00 0.00 0.00 1.82
4992 11254 7.014230 ACTGTCAGCATTGTTTTACTACCATTT 59.986 33.333 0.00 0.00 0.00 2.32
4993 11255 6.490040 ACTGTCAGCATTGTTTTACTACCATT 59.510 34.615 0.00 0.00 0.00 3.16
5000 11265 4.669197 CGCCTACTGTCAGCATTGTTTTAC 60.669 45.833 0.00 0.00 0.00 2.01
5015 11280 0.741221 GAAACAGGGAGCGCCTACTG 60.741 60.000 17.83 17.83 37.01 2.74
5035 11300 2.278854 TCCTTTTGCTTGTTTGCTTGC 58.721 42.857 0.00 0.00 0.00 4.01
5060 11325 9.093458 TGCTGAAACAGAGATCCTTATATGATA 57.907 33.333 2.81 0.00 32.44 2.15
5061 11326 7.971201 TGCTGAAACAGAGATCCTTATATGAT 58.029 34.615 2.81 0.00 32.44 2.45
5062 11327 7.365497 TGCTGAAACAGAGATCCTTATATGA 57.635 36.000 2.81 0.00 32.44 2.15
5063 11328 8.442632 TTTGCTGAAACAGAGATCCTTATATG 57.557 34.615 2.81 0.00 32.44 1.78
5064 11329 7.228308 GCTTTGCTGAAACAGAGATCCTTATAT 59.772 37.037 2.81 0.00 32.44 0.86
5065 11330 6.540189 GCTTTGCTGAAACAGAGATCCTTATA 59.460 38.462 2.81 0.00 32.44 0.98
5066 11331 5.356470 GCTTTGCTGAAACAGAGATCCTTAT 59.644 40.000 2.81 0.00 32.44 1.73
5067 11332 4.697352 GCTTTGCTGAAACAGAGATCCTTA 59.303 41.667 2.81 0.00 32.44 2.69
5068 11333 3.505293 GCTTTGCTGAAACAGAGATCCTT 59.495 43.478 2.81 0.00 32.44 3.36
5069 11334 3.080319 GCTTTGCTGAAACAGAGATCCT 58.920 45.455 2.81 0.00 32.44 3.24
5070 11335 3.080319 AGCTTTGCTGAAACAGAGATCC 58.920 45.455 2.81 0.00 37.57 3.36
5071 11336 4.094146 GGTAGCTTTGCTGAAACAGAGATC 59.906 45.833 0.00 0.00 40.10 2.75
5072 11337 4.006319 GGTAGCTTTGCTGAAACAGAGAT 58.994 43.478 0.00 0.00 40.10 2.75
5073 11338 3.403038 GGTAGCTTTGCTGAAACAGAGA 58.597 45.455 0.00 0.00 40.10 3.10
5074 11339 2.485814 GGGTAGCTTTGCTGAAACAGAG 59.514 50.000 0.00 0.00 40.10 3.35
5075 11340 2.504367 GGGTAGCTTTGCTGAAACAGA 58.496 47.619 0.00 0.00 40.10 3.41
5076 11341 1.541588 GGGGTAGCTTTGCTGAAACAG 59.458 52.381 0.00 0.00 40.10 3.16
5077 11342 1.616159 GGGGTAGCTTTGCTGAAACA 58.384 50.000 0.00 0.00 40.10 2.83
5078 11343 0.888619 GGGGGTAGCTTTGCTGAAAC 59.111 55.000 0.00 0.00 40.10 2.78
5079 11344 0.480690 TGGGGGTAGCTTTGCTGAAA 59.519 50.000 0.00 0.00 40.10 2.69
5080 11345 0.038166 CTGGGGGTAGCTTTGCTGAA 59.962 55.000 0.00 0.00 40.10 3.02
5081 11346 1.685224 CTGGGGGTAGCTTTGCTGA 59.315 57.895 0.00 0.00 40.10 4.26
5082 11347 1.379044 CCTGGGGGTAGCTTTGCTG 60.379 63.158 0.00 0.00 40.10 4.41
5083 11348 0.921256 ATCCTGGGGGTAGCTTTGCT 60.921 55.000 0.00 0.00 43.41 3.91
5084 11349 0.033109 AATCCTGGGGGTAGCTTTGC 60.033 55.000 0.00 0.00 0.00 3.68
5085 11350 2.749800 GCTAATCCTGGGGGTAGCTTTG 60.750 54.545 13.54 0.00 35.41 2.77
5086 11351 1.495148 GCTAATCCTGGGGGTAGCTTT 59.505 52.381 13.54 0.00 35.41 3.51
5087 11352 1.141185 GCTAATCCTGGGGGTAGCTT 58.859 55.000 13.54 0.00 35.41 3.74
5088 11353 0.030092 TGCTAATCCTGGGGGTAGCT 60.030 55.000 18.51 0.00 37.50 3.32
5089 11354 0.398318 CTGCTAATCCTGGGGGTAGC 59.602 60.000 13.79 13.79 37.29 3.58
5090 11355 1.974236 CTCTGCTAATCCTGGGGGTAG 59.026 57.143 0.00 0.00 0.00 3.18
5091 11356 2.103153 CTCTGCTAATCCTGGGGGTA 57.897 55.000 0.00 0.00 0.00 3.69
5092 11357 2.936823 CTCTGCTAATCCTGGGGGT 58.063 57.895 0.00 0.00 0.00 4.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.