Multiple sequence alignment - TraesCS6B01G440800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G440800 chr6B 100.000 6713 0 0 1 6713 705549492 705556204 0.000000e+00 12397.0
1 TraesCS6B01G440800 chr6B 89.399 2811 267 15 2926 5723 705920548 705923340 0.000000e+00 3511.0
2 TraesCS6B01G440800 chr6B 86.894 2663 315 12 2833 5481 705803062 705805704 0.000000e+00 2953.0
3 TraesCS6B01G440800 chr6B 89.013 2330 216 23 2689 4992 705842281 705844596 0.000000e+00 2848.0
4 TraesCS6B01G440800 chr6B 90.510 2097 170 15 2896 4977 705504320 705506402 0.000000e+00 2743.0
5 TraesCS6B01G440800 chr6B 90.905 2034 151 11 982 2996 705801438 705803456 0.000000e+00 2700.0
6 TraesCS6B01G440800 chr6B 86.936 2373 266 22 2895 5245 705644450 705646800 0.000000e+00 2625.0
7 TraesCS6B01G440800 chr6B 86.002 2386 272 19 713 3067 705949038 705951392 0.000000e+00 2499.0
8 TraesCS6B01G440800 chr6B 89.964 1923 149 17 955 2864 705918889 705920780 0.000000e+00 2442.0
9 TraesCS6B01G440800 chr6B 87.948 2066 219 19 2896 4942 705940922 705942976 0.000000e+00 2409.0
10 TraesCS6B01G440800 chr6B 85.847 2155 281 15 2833 4970 705602373 705604520 0.000000e+00 2268.0
11 TraesCS6B01G440800 chr6B 89.006 1610 156 7 1333 2927 705503048 705504651 0.000000e+00 1973.0
12 TraesCS6B01G440800 chr6B 87.707 1147 111 18 1880 2996 705601621 705602767 0.000000e+00 1310.0
13 TraesCS6B01G440800 chr6B 94.905 844 30 5 1049 1879 705840997 705841840 0.000000e+00 1308.0
14 TraesCS6B01G440800 chr6B 84.191 1360 195 9 1575 2927 705827436 705828782 0.000000e+00 1303.0
15 TraesCS6B01G440800 chr6B 88.943 814 84 3 2707 3514 705959037 705959850 0.000000e+00 1000.0
16 TraesCS6B01G440800 chr6B 88.264 818 90 1 1363 2174 705826912 705827729 0.000000e+00 974.0
17 TraesCS6B01G440800 chr6B 90.778 694 38 8 627 1294 705826234 705826927 0.000000e+00 904.0
18 TraesCS6B01G440800 chr6B 86.190 630 55 14 721 1334 705502475 705503088 0.000000e+00 652.0
19 TraesCS6B01G440800 chr6B 89.516 496 45 4 805 1296 705600895 705601387 7.390000e-174 621.0
20 TraesCS6B01G440800 chr6B 87.833 526 37 10 5893 6394 705714230 705714752 5.800000e-165 592.0
21 TraesCS6B01G440800 chr6B 86.807 523 55 10 801 1311 705939453 705939973 7.550000e-159 571.0
22 TraesCS6B01G440800 chr6B 83.716 522 62 17 5998 6503 705923573 705924087 7.880000e-129 472.0
23 TraesCS6B01G440800 chr6B 88.220 382 39 2 2615 2996 705951015 705951390 1.030000e-122 451.0
24 TraesCS6B01G440800 chr6B 86.555 357 42 3 2638 2988 705959112 705959468 8.160000e-104 388.0
25 TraesCS6B01G440800 chr6B 92.692 260 14 4 421 677 705840714 705840971 2.960000e-98 370.0
26 TraesCS6B01G440800 chr6B 89.474 285 28 2 5894 6177 705605148 705605431 6.400000e-95 359.0
27 TraesCS6B01G440800 chr6B 84.594 357 43 3 2782 3132 705552129 705552479 1.790000e-90 344.0
28 TraesCS6B01G440800 chr6B 90.000 270 6 9 571 821 705600518 705600785 5.020000e-86 329.0
29 TraesCS6B01G440800 chr6B 90.213 235 22 1 5896 6129 705658502 705658736 8.460000e-79 305.0
30 TraesCS6B01G440800 chr6B 92.823 209 15 0 216 424 705838370 705838578 3.040000e-78 303.0
31 TraesCS6B01G440800 chr6B 92.823 209 12 2 321 526 705824873 705825081 3.940000e-77 300.0
32 TraesCS6B01G440800 chr6B 89.300 243 21 3 5893 6130 705845567 705845809 3.940000e-77 300.0
33 TraesCS6B01G440800 chr6B 78.947 437 84 4 2782 3217 705950963 705951392 2.370000e-74 291.0
34 TraesCS6B01G440800 chr6B 89.340 197 17 3 332 526 705600312 705600506 1.870000e-60 244.0
35 TraesCS6B01G440800 chr6B 91.011 178 13 2 5505 5681 705646793 705646968 3.130000e-58 237.0
36 TraesCS6B01G440800 chr6B 83.133 249 34 7 5893 6140 705832998 705833239 3.150000e-53 220.0
37 TraesCS6B01G440800 chr6B 88.636 176 11 1 6538 6713 705714749 705714915 8.820000e-49 206.0
38 TraesCS6B01G440800 chr6B 79.435 248 31 11 5222 5449 705809568 705809815 2.510000e-34 158.0
39 TraesCS6B01G440800 chr6B 90.678 118 8 2 562 678 705918606 705918721 3.240000e-33 154.0
40 TraesCS6B01G440800 chr6B 90.654 107 6 3 575 679 705948931 705949035 9.080000e-29 139.0
41 TraesCS6B01G440800 chr6B 84.286 140 18 3 5682 5817 705647018 705647157 4.220000e-27 134.0
42 TraesCS6B01G440800 chr6B 98.276 58 1 0 1 58 662814479 662814536 1.190000e-17 102.0
43 TraesCS6B01G440800 chr6B 96.667 60 1 1 1 59 685008098 685008039 1.540000e-16 99.0
44 TraesCS6B01G440800 chr6B 93.750 64 4 0 5505 5568 705961506 705961569 5.540000e-16 97.1
45 TraesCS6B01G440800 chr6B 80.556 108 6 6 583 678 705993654 705993758 1.210000e-07 69.4
46 TraesCS6B01G440800 chr6B 95.238 42 2 0 5488 5529 706337131 706337172 4.340000e-07 67.6
47 TraesCS6B01G440800 chr6A 89.785 2418 223 16 3169 5569 609722464 609724874 0.000000e+00 3075.0
48 TraesCS6B01G440800 chr6A 86.258 1681 193 13 1379 3037 609573624 609575288 0.000000e+00 1790.0
49 TraesCS6B01G440800 chr6A 86.551 1093 100 24 796 1879 609668539 609669593 0.000000e+00 1160.0
50 TraesCS6B01G440800 chr6A 89.554 852 83 3 2670 3515 609575422 609576273 0.000000e+00 1075.0
51 TraesCS6B01G440800 chr6A 81.797 1313 196 22 1880 3154 609669279 609670586 0.000000e+00 1061.0
52 TraesCS6B01G440800 chr6A 81.677 775 118 17 1881 2636 609721744 609722513 2.060000e-174 623.0
53 TraesCS6B01G440800 chr6A 85.956 591 65 12 721 1295 609573003 609573591 3.440000e-172 616.0
54 TraesCS6B01G440800 chr6A 90.819 403 31 1 2661 3057 609574837 609575239 9.910000e-148 534.0
55 TraesCS6B01G440800 chr6A 93.313 329 22 0 2638 2966 609574958 609575286 2.810000e-133 486.0
56 TraesCS6B01G440800 chr6A 85.288 469 63 5 1410 1875 609721579 609722044 4.710000e-131 479.0
57 TraesCS6B01G440800 chr6A 83.433 501 58 7 6025 6502 609725117 609725615 6.180000e-120 442.0
58 TraesCS6B01G440800 chr6A 87.075 294 35 2 234 526 609720170 609720461 5.020000e-86 329.0
59 TraesCS6B01G440800 chr6A 87.552 241 20 8 5893 6129 609693192 609693426 3.090000e-68 270.0
60 TraesCS6B01G440800 chr6A 76.321 511 83 30 5901 6396 609639184 609639671 8.700000e-59 239.0
61 TraesCS6B01G440800 chr6A 88.690 168 14 4 6228 6393 609579021 609579185 4.110000e-47 200.0
62 TraesCS6B01G440800 chr6A 86.264 182 20 2 5330 5507 609561708 609561888 6.870000e-45 193.0
63 TraesCS6B01G440800 chr6A 99.038 104 1 0 5629 5732 609724872 609724975 3.200000e-43 187.0
64 TraesCS6B01G440800 chr6A 87.879 132 9 5 548 678 609720653 609720778 1.510000e-31 148.0
65 TraesCS6B01G440800 chr6A 96.610 59 2 0 1 59 90028372 90028430 1.540000e-16 99.0
66 TraesCS6B01G440800 chr6D 87.192 2233 225 24 721 2927 462856138 462858335 0.000000e+00 2483.0
67 TraesCS6B01G440800 chr6D 87.405 2112 250 10 2926 5025 462858040 462860147 0.000000e+00 2412.0
68 TraesCS6B01G440800 chr6D 89.975 399 38 2 5069 5466 462860145 462860542 1.290000e-141 514.0
69 TraesCS6B01G440800 chr6D 86.250 480 41 7 5984 6440 462861237 462861714 1.300000e-136 497.0
70 TraesCS6B01G440800 chr6D 87.692 260 23 4 5483 5735 462860845 462861102 1.830000e-75 294.0
71 TraesCS6B01G440800 chr6D 86.391 169 20 2 5330 5495 462704376 462704544 1.490000e-41 182.0
72 TraesCS6B01G440800 chr7B 81.563 499 77 9 1388 1878 744217059 744216568 1.360000e-106 398.0
73 TraesCS6B01G440800 chr7B 96.774 62 0 1 1 60 145725374 145725435 1.190000e-17 102.0
74 TraesCS6B01G440800 chr7B 96.721 61 0 1 1 59 52655028 52655088 4.280000e-17 100.0
75 TraesCS6B01G440800 chr7B 96.721 61 0 1 1 59 52676411 52676471 4.280000e-17 100.0
76 TraesCS6B01G440800 chrUn 83.333 372 39 10 721 1082 476606681 476607039 8.400000e-84 322.0
77 TraesCS6B01G440800 chr2B 98.361 61 0 1 1 60 677038907 677038967 9.210000e-19 106.0
78 TraesCS6B01G440800 chr4A 96.774 62 0 1 1 60 675142133 675142072 1.190000e-17 102.0
79 TraesCS6B01G440800 chr4A 96.774 62 0 1 1 60 675164113 675164052 1.190000e-17 102.0
80 TraesCS6B01G440800 chr4B 75.325 231 43 11 5921 6139 40785402 40785630 1.540000e-16 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G440800 chr6B 705549492 705556204 6712 False 12397.000000 12397 100.000000 1 6713 1 chr6B.!!$F2 6712
1 TraesCS6B01G440800 chr6B 705801438 705809815 8377 False 1937.000000 2953 85.744667 982 5481 3 chr6B.!!$F12 4499
2 TraesCS6B01G440800 chr6B 705502475 705506402 3927 False 1789.333333 2743 88.568667 721 4977 3 chr6B.!!$F8 4256
3 TraesCS6B01G440800 chr6B 705918606 705924087 5481 False 1644.750000 3511 88.439250 562 6503 4 chr6B.!!$F15 5941
4 TraesCS6B01G440800 chr6B 705939453 705942976 3523 False 1490.000000 2409 87.377500 801 4942 2 chr6B.!!$F16 4141
5 TraesCS6B01G440800 chr6B 705838370 705845809 7439 False 1025.800000 2848 91.746600 216 6130 5 chr6B.!!$F14 5914
6 TraesCS6B01G440800 chr6B 705644450 705647157 2707 False 998.666667 2625 87.411000 2895 5817 3 chr6B.!!$F10 2922
7 TraesCS6B01G440800 chr6B 705824873 705828782 3909 False 870.250000 1303 89.014000 321 2927 4 chr6B.!!$F13 2606
8 TraesCS6B01G440800 chr6B 705600312 705605431 5119 False 855.166667 2268 88.647333 332 6177 6 chr6B.!!$F9 5845
9 TraesCS6B01G440800 chr6B 705948931 705951392 2461 False 845.000000 2499 85.955750 575 3217 4 chr6B.!!$F17 2642
10 TraesCS6B01G440800 chr6B 705959037 705961569 2532 False 495.033333 1000 89.749333 2638 5568 3 chr6B.!!$F18 2930
11 TraesCS6B01G440800 chr6B 705714230 705714915 685 False 399.000000 592 88.234500 5893 6713 2 chr6B.!!$F11 820
12 TraesCS6B01G440800 chr6A 609668539 609670586 2047 False 1110.500000 1160 84.174000 796 3154 2 chr6A.!!$F6 2358
13 TraesCS6B01G440800 chr6A 609573003 609579185 6182 False 783.500000 1790 89.098333 721 6393 6 chr6A.!!$F5 5672
14 TraesCS6B01G440800 chr6A 609720170 609725615 5445 False 754.714286 3075 87.739286 234 6502 7 chr6A.!!$F7 6268
15 TraesCS6B01G440800 chr6D 462856138 462861714 5576 False 1240.000000 2483 87.702800 721 6440 5 chr6D.!!$F2 5719

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
191 192 0.033504 TGAGGAGCGACACAAACCTC 59.966 55.000 0.00 0.0 44.90 3.85 F
288 289 0.250338 ACTTCACGGAAAGGGAGCAC 60.250 55.000 4.39 0.0 31.37 4.40 F
2029 6124 0.250234 TGGATCTTGGTTCTGCGAGG 59.750 55.000 0.00 0.0 0.00 4.63 F
2030 6125 0.462759 GGATCTTGGTTCTGCGAGGG 60.463 60.000 0.00 0.0 0.00 4.30 F
3515 8921 0.107897 ATTGCGTGGCTCATTACCGA 60.108 50.000 0.00 0.0 0.00 4.69 F
3649 9057 1.046472 TATCCGGGTCGTTGCCATCT 61.046 55.000 0.00 0.0 0.00 2.90 F
4140 9548 1.203994 CTTGAAGGCAATGAAGGCAGG 59.796 52.381 0.00 0.0 36.37 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2018 6113 0.322546 AACCAATCCCTCGCAGAACC 60.323 55.000 0.00 0.00 34.09 3.62 R
2083 6178 0.813610 TGCTGTTGAGTCCACAACCG 60.814 55.000 0.00 0.00 46.32 4.44 R
3098 8504 1.684248 GCTGAGGTCCAAATGCTCCAT 60.684 52.381 0.00 0.00 0.00 3.41 R
3564 8972 1.948104 TGGAACTTGACCTGTCAACG 58.052 50.000 8.58 7.92 43.90 4.10 R
4375 9783 1.009389 CGAGTGACTCCAACCGCTTC 61.009 60.000 7.07 0.00 0.00 3.86 R
4765 10173 1.266718 ACAGCCACTTGCACATAAACG 59.733 47.619 0.00 0.00 44.83 3.60 R
6057 13189 0.953960 ATTCGAGGCGTTGGTGTTCC 60.954 55.000 0.00 0.00 0.00 3.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 8.800332 ACCATACTATCCACTATACGTTTTAGG 58.200 37.037 0.00 0.00 0.00 2.69
39 40 6.661304 ACTATCCACTATACGTTTTAGGGG 57.339 41.667 16.61 16.61 40.95 4.79
40 41 6.138967 ACTATCCACTATACGTTTTAGGGGT 58.861 40.000 20.09 12.97 40.53 4.95
41 42 5.963214 ATCCACTATACGTTTTAGGGGTT 57.037 39.130 20.09 12.75 40.53 4.11
43 44 4.531732 TCCACTATACGTTTTAGGGGTTGT 59.468 41.667 20.09 0.00 40.53 3.32
46 47 5.812127 CACTATACGTTTTAGGGGTTGTACC 59.188 44.000 0.00 0.00 37.60 3.34
47 48 2.168326 ACGTTTTAGGGGTTGTACCG 57.832 50.000 0.00 0.00 39.83 4.02
48 49 1.691434 ACGTTTTAGGGGTTGTACCGA 59.309 47.619 0.00 0.00 39.83 4.69
49 50 2.103941 ACGTTTTAGGGGTTGTACCGAA 59.896 45.455 0.00 0.00 39.83 4.30
50 51 2.738314 CGTTTTAGGGGTTGTACCGAAG 59.262 50.000 0.00 0.00 39.83 3.79
51 52 2.477845 TTTAGGGGTTGTACCGAAGC 57.522 50.000 0.00 0.00 39.83 3.86
52 53 1.350071 TTAGGGGTTGTACCGAAGCA 58.650 50.000 0.00 0.00 39.83 3.91
53 54 0.609662 TAGGGGTTGTACCGAAGCAC 59.390 55.000 0.00 0.00 39.83 4.40
54 55 1.125711 AGGGGTTGTACCGAAGCACT 61.126 55.000 0.00 0.00 39.83 4.40
55 56 0.672711 GGGGTTGTACCGAAGCACTC 60.673 60.000 0.00 0.00 39.83 3.51
57 58 0.672711 GGTTGTACCGAAGCACTCCC 60.673 60.000 0.00 0.00 0.00 4.30
58 59 0.672711 GTTGTACCGAAGCACTCCCC 60.673 60.000 0.00 0.00 0.00 4.81
59 60 0.834687 TTGTACCGAAGCACTCCCCT 60.835 55.000 0.00 0.00 0.00 4.79
60 61 0.834687 TGTACCGAAGCACTCCCCTT 60.835 55.000 0.00 0.00 0.00 3.95
61 62 0.108281 GTACCGAAGCACTCCCCTTC 60.108 60.000 0.00 0.00 36.27 3.46
65 66 1.614317 CCGAAGCACTCCCCTTCAAAT 60.614 52.381 0.00 0.00 38.85 2.32
66 67 1.470098 CGAAGCACTCCCCTTCAAATG 59.530 52.381 0.00 0.00 38.85 2.32
67 68 2.795329 GAAGCACTCCCCTTCAAATGA 58.205 47.619 0.00 0.00 38.78 2.57
68 69 3.359950 GAAGCACTCCCCTTCAAATGAT 58.640 45.455 0.00 0.00 38.78 2.45
70 71 1.135721 GCACTCCCCTTCAAATGATGC 59.864 52.381 0.00 0.00 0.00 3.91
71 72 2.449464 CACTCCCCTTCAAATGATGCA 58.551 47.619 0.00 0.00 0.00 3.96
72 73 2.827322 CACTCCCCTTCAAATGATGCAA 59.173 45.455 0.00 0.00 0.00 4.08
73 74 3.258872 CACTCCCCTTCAAATGATGCAAA 59.741 43.478 0.00 0.00 0.00 3.68
74 75 3.512724 ACTCCCCTTCAAATGATGCAAAG 59.487 43.478 0.00 0.00 0.00 2.77
77 78 4.021192 TCCCCTTCAAATGATGCAAAGTTC 60.021 41.667 0.00 0.00 0.00 3.01
80 81 5.279106 CCCTTCAAATGATGCAAAGTTCTGA 60.279 40.000 0.00 0.00 0.00 3.27
81 82 6.218019 CCTTCAAATGATGCAAAGTTCTGAA 58.782 36.000 0.00 0.00 0.00 3.02
84 85 6.392354 TCAAATGATGCAAAGTTCTGAATCC 58.608 36.000 0.00 0.00 31.06 3.01
85 86 5.988310 AATGATGCAAAGTTCTGAATCCA 57.012 34.783 0.00 0.00 31.06 3.41
86 87 6.540438 AATGATGCAAAGTTCTGAATCCAT 57.460 33.333 0.00 0.00 31.06 3.41
89 90 7.649533 TGATGCAAAGTTCTGAATCCATTAT 57.350 32.000 0.00 0.00 31.06 1.28
90 91 8.070034 TGATGCAAAGTTCTGAATCCATTATT 57.930 30.769 0.00 0.00 31.06 1.40
91 92 8.533657 TGATGCAAAGTTCTGAATCCATTATTT 58.466 29.630 0.00 0.00 31.06 1.40
92 93 8.712285 ATGCAAAGTTCTGAATCCATTATTTG 57.288 30.769 0.00 0.00 0.00 2.32
95 96 8.866956 GCAAAGTTCTGAATCCATTATTTGAAG 58.133 33.333 0.00 0.00 0.00 3.02
97 98 9.918630 AAAGTTCTGAATCCATTATTTGAAGTG 57.081 29.630 0.00 0.00 30.86 3.16
98 99 8.868522 AGTTCTGAATCCATTATTTGAAGTGA 57.131 30.769 0.00 0.00 30.05 3.41
99 100 9.471702 AGTTCTGAATCCATTATTTGAAGTGAT 57.528 29.630 0.00 0.00 30.05 3.06
100 101 9.512435 GTTCTGAATCCATTATTTGAAGTGATG 57.488 33.333 0.00 0.00 0.00 3.07
102 103 7.339976 TCTGAATCCATTATTTGAAGTGATGCA 59.660 33.333 0.00 0.00 0.00 3.96
103 104 7.259882 TGAATCCATTATTTGAAGTGATGCAC 58.740 34.615 0.00 0.00 34.10 4.57
104 105 6.778834 ATCCATTATTTGAAGTGATGCACA 57.221 33.333 0.00 0.00 36.74 4.57
114 115 4.759096 GATGCACACCGCCGCAAC 62.759 66.667 0.00 0.00 42.37 4.17
125 126 2.434359 CCGCAACCCCTCTCGTTC 60.434 66.667 0.00 0.00 0.00 3.95
126 127 2.657237 CGCAACCCCTCTCGTTCT 59.343 61.111 0.00 0.00 0.00 3.01
128 129 1.079057 GCAACCCCTCTCGTTCTCC 60.079 63.158 0.00 0.00 0.00 3.71
131 132 0.905337 AACCCCTCTCGTTCTCCAGG 60.905 60.000 0.00 0.00 0.00 4.45
132 133 2.726351 CCCCTCTCGTTCTCCAGGC 61.726 68.421 0.00 0.00 0.00 4.85
133 134 2.492090 CCTCTCGTTCTCCAGGCG 59.508 66.667 0.00 0.00 0.00 5.52
137 138 2.282958 TCGTTCTCCAGGCGAGGT 60.283 61.111 0.00 0.00 39.30 3.85
138 139 2.125912 CGTTCTCCAGGCGAGGTG 60.126 66.667 0.00 0.00 39.30 4.00
139 140 2.932234 CGTTCTCCAGGCGAGGTGT 61.932 63.158 0.00 0.00 39.30 4.16
140 141 1.374758 GTTCTCCAGGCGAGGTGTG 60.375 63.158 0.00 0.00 39.30 3.82
141 142 3.240134 TTCTCCAGGCGAGGTGTGC 62.240 63.158 0.00 0.00 39.30 4.57
182 183 4.593864 GGGCGGATGAGGAGCGAC 62.594 72.222 0.00 0.00 0.00 5.19
183 184 3.838271 GGCGGATGAGGAGCGACA 61.838 66.667 0.00 0.00 0.00 4.35
184 185 2.583593 GCGGATGAGGAGCGACAC 60.584 66.667 0.00 0.00 0.00 3.67
185 186 2.885113 CGGATGAGGAGCGACACA 59.115 61.111 0.00 0.00 0.00 3.72
186 187 1.215382 CGGATGAGGAGCGACACAA 59.785 57.895 0.00 0.00 0.00 3.33
187 188 0.389817 CGGATGAGGAGCGACACAAA 60.390 55.000 0.00 0.00 0.00 2.83
188 189 1.079503 GGATGAGGAGCGACACAAAC 58.920 55.000 0.00 0.00 0.00 2.93
189 190 1.079503 GATGAGGAGCGACACAAACC 58.920 55.000 0.00 0.00 0.00 3.27
190 191 0.687354 ATGAGGAGCGACACAAACCT 59.313 50.000 0.00 0.00 0.00 3.50
191 192 0.033504 TGAGGAGCGACACAAACCTC 59.966 55.000 0.00 0.00 44.90 3.85
192 193 0.318762 GAGGAGCGACACAAACCTCT 59.681 55.000 0.00 0.00 42.41 3.69
193 194 1.544691 GAGGAGCGACACAAACCTCTA 59.455 52.381 0.00 0.00 42.41 2.43
194 195 1.546476 AGGAGCGACACAAACCTCTAG 59.454 52.381 0.00 0.00 0.00 2.43
195 196 1.404315 GGAGCGACACAAACCTCTAGG 60.404 57.143 0.00 0.00 42.17 3.02
196 197 1.544691 GAGCGACACAAACCTCTAGGA 59.455 52.381 2.23 0.00 38.94 2.94
197 198 1.272769 AGCGACACAAACCTCTAGGAC 59.727 52.381 2.23 0.00 38.94 3.85
198 199 1.978542 CGACACAAACCTCTAGGACG 58.021 55.000 2.23 0.00 38.94 4.79
199 200 1.402456 CGACACAAACCTCTAGGACGG 60.402 57.143 2.23 0.00 38.94 4.79
200 201 0.320697 ACACAAACCTCTAGGACGGC 59.679 55.000 2.23 0.00 38.94 5.68
201 202 0.736325 CACAAACCTCTAGGACGGCG 60.736 60.000 4.80 4.80 38.94 6.46
202 203 0.896940 ACAAACCTCTAGGACGGCGA 60.897 55.000 16.62 0.00 38.94 5.54
203 204 0.458025 CAAACCTCTAGGACGGCGAC 60.458 60.000 16.62 7.58 38.94 5.19
270 271 3.768632 CGCAGGTTCGCACTCTAC 58.231 61.111 0.00 0.00 0.00 2.59
288 289 0.250338 ACTTCACGGAAAGGGAGCAC 60.250 55.000 4.39 0.00 31.37 4.40
301 302 0.807496 GGAGCACAGCAATTCAGACC 59.193 55.000 0.00 0.00 0.00 3.85
316 317 2.950309 TCAGACCTGTCGCTAGATTACC 59.050 50.000 0.00 0.00 34.09 2.85
318 319 2.952978 AGACCTGTCGCTAGATTACCAG 59.047 50.000 0.00 0.00 34.09 4.00
348 349 0.391130 GCTATGACGTGCCTCACCAA 60.391 55.000 0.00 0.00 0.00 3.67
526 2669 8.531982 ACTAGAAGAAAAGTATGCATACAGTGA 58.468 33.333 32.69 11.21 35.74 3.41
529 2672 9.319143 AGAAGAAAAGTATGCATACAGTGATAC 57.681 33.333 32.69 19.99 35.74 2.24
532 2675 8.260818 AGAAAAGTATGCATACAGTGATACAGT 58.739 33.333 32.69 10.28 35.74 3.55
540 2683 8.691661 TGCATACAGTGATACAGTATTAGAGA 57.308 34.615 0.00 0.00 29.85 3.10
541 2684 9.131791 TGCATACAGTGATACAGTATTAGAGAA 57.868 33.333 0.00 0.00 29.85 2.87
618 4033 3.006537 AGACGTGGACTAGCTTTGCTTTA 59.993 43.478 0.00 0.00 40.44 1.85
619 4034 3.326747 ACGTGGACTAGCTTTGCTTTAG 58.673 45.455 0.00 0.00 40.44 1.85
620 4035 3.006537 ACGTGGACTAGCTTTGCTTTAGA 59.993 43.478 0.00 0.00 40.44 2.10
621 4036 3.368236 CGTGGACTAGCTTTGCTTTAGAC 59.632 47.826 0.00 0.00 40.44 2.59
623 4038 3.326588 TGGACTAGCTTTGCTTTAGACCA 59.673 43.478 8.61 8.61 36.98 4.02
624 4039 4.019321 TGGACTAGCTTTGCTTTAGACCAT 60.019 41.667 8.61 0.00 35.43 3.55
979 4630 5.123936 GGAACCCGAATAAAGATAAGCTGT 58.876 41.667 0.00 0.00 0.00 4.40
980 4631 5.236695 GGAACCCGAATAAAGATAAGCTGTC 59.763 44.000 0.00 0.00 0.00 3.51
999 4653 3.202151 TGTCCTGTCCATTATCCTTTCCC 59.798 47.826 0.00 0.00 0.00 3.97
1749 5844 3.094572 CTGCAAGGGATTGGTTTCAGAT 58.905 45.455 0.00 0.00 0.00 2.90
1771 5866 4.326826 TGGTTAACATGCTTCCTTCTCTG 58.673 43.478 8.10 0.00 0.00 3.35
1792 5887 0.946221 AAGTGCTTCGCTTGTCCGAG 60.946 55.000 0.00 0.00 38.60 4.63
1810 5905 2.093106 GAGTGTGGACTCGATGGTACT 58.907 52.381 0.00 0.00 39.44 2.73
1813 5908 5.045012 AGTGTGGACTCGATGGTACTATA 57.955 43.478 0.00 0.00 0.00 1.31
1820 5915 6.114089 GGACTCGATGGTACTATATCTGCTA 58.886 44.000 0.00 0.00 0.00 3.49
1821 5916 6.259167 GGACTCGATGGTACTATATCTGCTAG 59.741 46.154 0.00 0.00 0.00 3.42
1849 5944 5.139727 TCAATTTCCAACCTCACACATCTT 58.860 37.500 0.00 0.00 0.00 2.40
1862 5957 3.688185 CACACATCTTGAGGTCCTTGATG 59.312 47.826 19.96 19.96 39.99 3.07
1867 5962 3.242867 TCTTGAGGTCCTTGATGTGTCT 58.757 45.455 0.00 0.00 0.00 3.41
1868 5963 3.007290 TCTTGAGGTCCTTGATGTGTCTG 59.993 47.826 0.00 0.00 0.00 3.51
1924 6019 6.911511 GCAATCTCTCAAAGTTGCAATATCTC 59.088 38.462 0.59 0.00 44.63 2.75
1935 6030 5.877012 AGTTGCAATATCTCGATGTGAGTTT 59.123 36.000 0.59 0.00 45.46 2.66
1948 6043 6.538742 TCGATGTGAGTTTGAATTCTTATCCC 59.461 38.462 7.05 0.00 0.00 3.85
1949 6044 6.316140 CGATGTGAGTTTGAATTCTTATCCCA 59.684 38.462 7.05 0.00 0.00 4.37
1950 6045 7.148255 CGATGTGAGTTTGAATTCTTATCCCAA 60.148 37.037 7.05 0.00 0.00 4.12
1954 6049 8.956426 GTGAGTTTGAATTCTTATCCCAATGTA 58.044 33.333 7.05 0.00 0.00 2.29
1959 6054 9.919416 TTTGAATTCTTATCCCAATGTAGATCA 57.081 29.630 7.05 0.00 0.00 2.92
1970 6065 4.340097 CCAATGTAGATCATGCATGGTTGT 59.660 41.667 25.97 13.24 34.08 3.32
1983 6078 2.795175 TGGTTGTCACGTCTCTCTTC 57.205 50.000 0.00 0.00 0.00 2.87
2005 6100 3.341823 GTTGAGCCATCTTGACATGAGT 58.658 45.455 0.00 0.00 0.00 3.41
2006 6101 3.708403 TGAGCCATCTTGACATGAGTT 57.292 42.857 0.00 0.00 0.00 3.01
2007 6102 4.824479 TGAGCCATCTTGACATGAGTTA 57.176 40.909 0.00 0.00 0.00 2.24
2025 6120 4.265073 AGTTATGTGGATCTTGGTTCTGC 58.735 43.478 0.00 0.00 0.00 4.26
2029 6124 0.250234 TGGATCTTGGTTCTGCGAGG 59.750 55.000 0.00 0.00 0.00 4.63
2030 6125 0.462759 GGATCTTGGTTCTGCGAGGG 60.463 60.000 0.00 0.00 0.00 4.30
2031 6126 0.537188 GATCTTGGTTCTGCGAGGGA 59.463 55.000 0.00 0.00 0.00 4.20
2034 6129 1.089920 CTTGGTTCTGCGAGGGATTG 58.910 55.000 0.00 0.00 0.00 2.67
2041 6136 1.089920 CTGCGAGGGATTGGTTTCAG 58.910 55.000 0.00 0.00 0.00 3.02
2043 6138 1.339055 TGCGAGGGATTGGTTTCAGAG 60.339 52.381 0.00 0.00 0.00 3.35
2044 6139 1.339151 GCGAGGGATTGGTTTCAGAGT 60.339 52.381 0.00 0.00 0.00 3.24
2050 6145 5.892348 AGGGATTGGTTTCAGAGTGTTAAT 58.108 37.500 0.00 0.00 0.00 1.40
2058 6153 6.374333 TGGTTTCAGAGTGTTAATATGCTTCC 59.626 38.462 0.00 0.00 0.00 3.46
2075 6170 6.867662 TGCTTCCTTCTCTTAAAGTTCTTG 57.132 37.500 0.00 0.00 0.00 3.02
2083 6178 5.063880 TCTCTTAAAGTTCTTGGCTTGTCC 58.936 41.667 0.00 0.00 0.00 4.02
2381 6485 3.685139 TGACCAGAATGAGGTTCAGTC 57.315 47.619 0.00 0.00 41.35 3.51
2527 6631 4.631813 GGTAACATGACCAATCTCAGTGTC 59.368 45.833 0.00 0.00 39.51 3.67
2532 6636 2.029020 TGACCAATCTCAGTGTCCTTCG 60.029 50.000 0.00 0.00 0.00 3.79
2579 6683 3.565890 CCCTCTACCTGTAGGAGTTGGAA 60.566 52.174 4.64 0.00 38.94 3.53
2589 6693 4.523173 TGTAGGAGTTGGAACACTGAGTAG 59.477 45.833 0.00 0.00 39.29 2.57
2651 6755 5.812127 GGTGTGCTCTTGAAAGAACAATTTT 59.188 36.000 0.00 0.00 33.37 1.82
2728 7126 6.421801 GTGTGCTATTGAAAGAACAATTTGCT 59.578 34.615 1.91 0.00 36.77 3.91
2729 7127 6.421501 TGTGCTATTGAAAGAACAATTTGCTG 59.578 34.615 1.91 0.00 40.36 4.41
2730 7128 5.927689 TGCTATTGAAAGAACAATTTGCTGG 59.072 36.000 1.91 0.00 40.36 4.85
2731 7129 5.928264 GCTATTGAAAGAACAATTTGCTGGT 59.072 36.000 0.00 0.00 40.36 4.00
2732 7130 6.424812 GCTATTGAAAGAACAATTTGCTGGTT 59.575 34.615 0.00 0.00 40.36 3.67
2733 7131 7.041848 GCTATTGAAAGAACAATTTGCTGGTTT 60.042 33.333 0.00 0.00 40.36 3.27
2734 7132 9.474920 CTATTGAAAGAACAATTTGCTGGTTTA 57.525 29.630 0.00 0.00 40.36 2.01
2735 7133 7.769272 TTGAAAGAACAATTTGCTGGTTTAG 57.231 32.000 0.00 0.00 0.00 1.85
2736 7134 6.279882 TGAAAGAACAATTTGCTGGTTTAGG 58.720 36.000 0.00 0.00 0.00 2.69
2737 7135 4.257267 AGAACAATTTGCTGGTTTAGGC 57.743 40.909 0.00 0.00 0.00 3.93
2738 7136 3.640967 AGAACAATTTGCTGGTTTAGGCA 59.359 39.130 0.00 0.00 36.62 4.75
2739 7137 4.100808 AGAACAATTTGCTGGTTTAGGCAA 59.899 37.500 0.00 0.00 45.06 4.52
2740 7138 3.727726 ACAATTTGCTGGTTTAGGCAAC 58.272 40.909 0.00 0.00 46.14 4.17
2756 7154 3.390135 GGCAACTTAAAGGTTTTGGAGC 58.610 45.455 0.00 0.00 0.00 4.70
2757 7155 3.069586 GGCAACTTAAAGGTTTTGGAGCT 59.930 43.478 0.00 0.00 37.82 4.09
2759 7157 5.221362 GGCAACTTAAAGGTTTTGGAGCTTA 60.221 40.000 0.00 0.00 44.94 3.09
2760 7158 5.920840 GCAACTTAAAGGTTTTGGAGCTTAG 59.079 40.000 0.00 0.00 44.94 2.18
2761 7159 5.707242 ACTTAAAGGTTTTGGAGCTTAGC 57.293 39.130 0.00 0.00 44.94 3.09
2762 7160 5.386060 ACTTAAAGGTTTTGGAGCTTAGCT 58.614 37.500 6.37 6.37 44.94 3.32
2763 7161 6.540083 ACTTAAAGGTTTTGGAGCTTAGCTA 58.460 36.000 6.75 0.00 44.94 3.32
2764 7162 6.430308 ACTTAAAGGTTTTGGAGCTTAGCTAC 59.570 38.462 9.96 9.96 44.94 3.58
2791 7189 6.942532 AGCTTCAATAGTGTGAAAGAACAA 57.057 33.333 0.00 0.00 37.08 2.83
2842 7885 4.331968 TGGACCTTAGCCACAATAACTTG 58.668 43.478 0.00 0.00 38.39 3.16
2959 8365 4.970662 TGCAAGCTTAGGCAAATTAGAG 57.029 40.909 8.89 0.00 41.70 2.43
2960 8366 4.588899 TGCAAGCTTAGGCAAATTAGAGA 58.411 39.130 8.89 0.00 41.70 3.10
2961 8367 5.009631 TGCAAGCTTAGGCAAATTAGAGAA 58.990 37.500 8.89 0.00 41.70 2.87
2962 8368 5.653769 TGCAAGCTTAGGCAAATTAGAGAAT 59.346 36.000 8.89 0.00 41.70 2.40
2963 8369 6.153340 TGCAAGCTTAGGCAAATTAGAGAATT 59.847 34.615 8.89 0.00 41.70 2.17
2964 8370 7.038048 GCAAGCTTAGGCAAATTAGAGAATTT 58.962 34.615 0.00 0.00 44.44 1.82
2975 8381 6.765915 AATTAGAGAATTTGAACCTCAGCC 57.234 37.500 0.00 0.00 30.77 4.85
2976 8382 3.795688 AGAGAATTTGAACCTCAGCCA 57.204 42.857 0.00 0.00 0.00 4.75
2977 8383 3.416156 AGAGAATTTGAACCTCAGCCAC 58.584 45.455 0.00 0.00 0.00 5.01
2978 8384 3.149196 GAGAATTTGAACCTCAGCCACA 58.851 45.455 0.00 0.00 0.00 4.17
2979 8385 3.565307 AGAATTTGAACCTCAGCCACAA 58.435 40.909 0.00 0.00 0.00 3.33
2980 8386 4.154942 AGAATTTGAACCTCAGCCACAAT 58.845 39.130 0.00 0.00 0.00 2.71
2981 8387 5.324409 AGAATTTGAACCTCAGCCACAATA 58.676 37.500 0.00 0.00 0.00 1.90
2982 8388 5.774690 AGAATTTGAACCTCAGCCACAATAA 59.225 36.000 0.00 0.00 0.00 1.40
2983 8389 4.846779 TTTGAACCTCAGCCACAATAAC 57.153 40.909 0.00 0.00 0.00 1.89
2984 8390 3.788227 TGAACCTCAGCCACAATAACT 57.212 42.857 0.00 0.00 0.00 2.24
2985 8391 4.098914 TGAACCTCAGCCACAATAACTT 57.901 40.909 0.00 0.00 0.00 2.66
2986 8392 4.072131 TGAACCTCAGCCACAATAACTTC 58.928 43.478 0.00 0.00 0.00 3.01
2987 8393 3.788227 ACCTCAGCCACAATAACTTCA 57.212 42.857 0.00 0.00 0.00 3.02
2988 8394 4.098914 ACCTCAGCCACAATAACTTCAA 57.901 40.909 0.00 0.00 0.00 2.69
2989 8395 3.821033 ACCTCAGCCACAATAACTTCAAC 59.179 43.478 0.00 0.00 0.00 3.18
2990 8396 3.820467 CCTCAGCCACAATAACTTCAACA 59.180 43.478 0.00 0.00 0.00 3.33
2991 8397 4.083110 CCTCAGCCACAATAACTTCAACAG 60.083 45.833 0.00 0.00 0.00 3.16
2992 8398 4.460263 TCAGCCACAATAACTTCAACAGT 58.540 39.130 0.00 0.00 37.30 3.55
2993 8399 4.275689 TCAGCCACAATAACTTCAACAGTG 59.724 41.667 0.00 0.00 35.12 3.66
2994 8400 4.036734 CAGCCACAATAACTTCAACAGTGT 59.963 41.667 0.00 0.00 35.12 3.55
2995 8401 4.036734 AGCCACAATAACTTCAACAGTGTG 59.963 41.667 0.00 0.00 35.12 3.82
2996 8402 4.036262 GCCACAATAACTTCAACAGTGTGA 59.964 41.667 0.00 0.00 35.12 3.58
2997 8403 5.449862 GCCACAATAACTTCAACAGTGTGAA 60.450 40.000 0.00 2.35 35.12 3.18
2998 8404 6.559810 CCACAATAACTTCAACAGTGTGAAA 58.440 36.000 0.00 0.00 37.08 2.69
2999 8405 6.692681 CCACAATAACTTCAACAGTGTGAAAG 59.307 38.462 13.62 13.62 37.08 2.62
3000 8406 7.415095 CCACAATAACTTCAACAGTGTGAAAGA 60.415 37.037 19.47 4.83 37.08 2.52
3001 8407 7.967854 CACAATAACTTCAACAGTGTGAAAGAA 59.032 33.333 19.47 10.98 37.08 2.52
3002 8408 7.968405 ACAATAACTTCAACAGTGTGAAAGAAC 59.032 33.333 19.47 0.00 37.08 3.01
3003 8409 5.957842 AACTTCAACAGTGTGAAAGAACA 57.042 34.783 19.47 0.00 37.08 3.18
3004 8410 6.515272 AACTTCAACAGTGTGAAAGAACAT 57.485 33.333 19.47 5.32 37.08 2.71
3005 8411 6.515272 ACTTCAACAGTGTGAAAGAACATT 57.485 33.333 19.47 0.49 37.08 2.71
3006 8412 6.924111 ACTTCAACAGTGTGAAAGAACATTT 58.076 32.000 19.47 0.00 37.08 2.32
3007 8413 7.378181 ACTTCAACAGTGTGAAAGAACATTTT 58.622 30.769 19.47 0.00 37.08 1.82
3008 8414 7.329226 ACTTCAACAGTGTGAAAGAACATTTTG 59.671 33.333 19.47 1.60 37.08 2.44
3009 8415 5.576384 TCAACAGTGTGAAAGAACATTTTGC 59.424 36.000 0.00 0.00 31.49 3.68
3010 8416 5.070770 ACAGTGTGAAAGAACATTTTGCA 57.929 34.783 0.00 0.00 31.49 4.08
3011 8417 5.477510 ACAGTGTGAAAGAACATTTTGCAA 58.522 33.333 0.00 0.00 31.49 4.08
3012 8418 5.577945 ACAGTGTGAAAGAACATTTTGCAAG 59.422 36.000 0.00 0.00 31.49 4.01
3013 8419 5.577945 CAGTGTGAAAGAACATTTTGCAAGT 59.422 36.000 0.00 0.00 31.49 3.16
3014 8420 6.091169 CAGTGTGAAAGAACATTTTGCAAGTT 59.909 34.615 0.00 0.04 31.49 2.66
3015 8421 6.650390 AGTGTGAAAGAACATTTTGCAAGTTT 59.350 30.769 0.00 0.00 31.49 2.66
3016 8422 6.955407 GTGTGAAAGAACATTTTGCAAGTTTC 59.045 34.615 0.00 1.55 31.49 2.78
3017 8423 6.177822 GTGAAAGAACATTTTGCAAGTTTCG 58.822 36.000 0.00 0.00 0.00 3.46
3018 8424 5.290643 TGAAAGAACATTTTGCAAGTTTCGG 59.709 36.000 0.00 0.00 0.00 4.30
3019 8425 4.647424 AGAACATTTTGCAAGTTTCGGA 57.353 36.364 0.00 0.00 0.00 4.55
3020 8426 5.004922 AGAACATTTTGCAAGTTTCGGAA 57.995 34.783 0.00 0.00 0.00 4.30
3021 8427 5.415221 AGAACATTTTGCAAGTTTCGGAAA 58.585 33.333 0.00 0.00 0.00 3.13
3022 8428 5.290885 AGAACATTTTGCAAGTTTCGGAAAC 59.709 36.000 22.74 22.74 41.69 2.78
3073 8479 2.936919 TCAGTGGTGTGCTCTTCAAT 57.063 45.000 0.00 0.00 0.00 2.57
3089 8495 6.089150 GCTCTTCAATGAAGATTTTGCAAGTC 59.911 38.462 24.00 2.40 45.84 3.01
3098 8504 6.995686 TGAAGATTTTGCAAGTCTAGGTAACA 59.004 34.615 14.48 7.68 41.41 2.41
3163 8569 5.525378 TCTCTTGAAAGAACACTCAGAAAGC 59.475 40.000 0.00 0.00 34.03 3.51
3165 8571 5.525378 TCTTGAAAGAACACTCAGAAAGCTC 59.475 40.000 0.00 0.00 30.73 4.09
3167 8573 5.185454 TGAAAGAACACTCAGAAAGCTCAA 58.815 37.500 0.00 0.00 0.00 3.02
3173 8579 7.671302 AGAACACTCAGAAAGCTCAAGTAATA 58.329 34.615 0.00 0.00 0.00 0.98
3203 8609 7.609532 AGCATCTGGATCTTAGCCATAATAAAC 59.390 37.037 0.00 0.00 34.33 2.01
3224 8630 2.130272 AGATAGTGTGCTCGTGGAGA 57.870 50.000 0.00 0.00 0.00 3.71
3274 8680 5.892568 GAGTATCTGGACTTGTCGTACAAT 58.107 41.667 0.00 0.00 37.48 2.71
3311 8717 5.512232 GCTATCAACCAAAAATGGGTTCCAA 60.512 40.000 0.00 0.00 45.26 3.53
3322 8728 9.717942 CAAAAATGGGTTCCAACATTTAGATTA 57.282 29.630 0.00 0.00 44.11 1.75
3347 8753 3.252400 GTTGCGAAATTCCAATCATGCA 58.748 40.909 0.00 0.00 0.00 3.96
3376 8782 1.547372 CCCATTTTTCCAGAGTGGCTG 59.453 52.381 0.00 0.00 44.49 4.85
3416 8822 7.756395 ATTGATGTTCTTGTTCTCAGTGATT 57.244 32.000 0.00 0.00 0.00 2.57
3424 8830 8.993121 GTTCTTGTTCTCAGTGATTCAAATCTA 58.007 33.333 0.00 0.00 36.39 1.98
3515 8921 0.107897 ATTGCGTGGCTCATTACCGA 60.108 50.000 0.00 0.00 0.00 4.69
3564 8972 8.812972 TGAGTATATACATCTTGGGTCCAATAC 58.187 37.037 15.18 1.18 35.20 1.89
3596 9004 5.106277 GGTCAAGTTCCAAAGTTGCCTATAC 60.106 44.000 2.98 0.00 40.75 1.47
3640 9048 3.241067 TCAAACTCTTTATCCGGGTCG 57.759 47.619 0.00 0.00 0.00 4.79
3649 9057 1.046472 TATCCGGGTCGTTGCCATCT 61.046 55.000 0.00 0.00 0.00 2.90
3656 9064 1.512926 GTCGTTGCCATCTGAGTTGT 58.487 50.000 0.00 0.00 0.00 3.32
3715 9123 1.426251 AACTCACAGGCACCATCCCA 61.426 55.000 0.00 0.00 0.00 4.37
4034 9442 8.562892 CAAATATGTTCAGTGGTCATATTCCTC 58.437 37.037 21.82 0.00 41.11 3.71
4105 9513 2.159043 CGACATGTCAGGAAGCATACCT 60.159 50.000 24.93 0.00 38.40 3.08
4140 9548 1.203994 CTTGAAGGCAATGAAGGCAGG 59.796 52.381 0.00 0.00 36.37 4.85
4144 9552 1.610379 GGCAATGAAGGCAGGGGTT 60.610 57.895 0.00 0.00 0.00 4.11
4279 9687 5.472137 GTCAAGTAATAGTTTGGCAGGACAA 59.528 40.000 5.98 0.00 0.00 3.18
4527 9935 3.251004 GGACAACAGCTACAAACTCTTGG 59.749 47.826 0.00 0.00 36.82 3.61
4576 9984 1.406069 CCTGGTCTTTGTGGAGATCCG 60.406 57.143 0.00 0.00 39.43 4.18
4605 10013 2.163010 GGAACTGCTCAACACATGATGG 59.837 50.000 0.00 0.00 37.44 3.51
4623 10031 1.743252 GAGAGCAAAGTGGCCTCGG 60.743 63.158 3.32 0.00 0.00 4.63
4645 10053 7.445121 TCGGAGATATAAATCATATGCCATCC 58.555 38.462 0.00 0.00 34.28 3.51
4662 10070 3.822735 CCATCCGTTTATCTTGCCATGAT 59.177 43.478 0.00 0.00 0.00 2.45
4663 10071 4.279169 CCATCCGTTTATCTTGCCATGATT 59.721 41.667 0.00 0.00 0.00 2.57
4666 10074 6.558771 TCCGTTTATCTTGCCATGATTATG 57.441 37.500 0.00 0.00 0.00 1.90
4844 10252 0.606401 ACCATGAAGTGCCCAACTCG 60.606 55.000 0.00 0.00 38.56 4.18
4847 10255 0.670546 ATGAAGTGCCCAACTCGACG 60.671 55.000 0.00 0.00 38.56 5.12
4854 10262 1.300620 CCCAACTCGACGACAAGCA 60.301 57.895 0.00 0.00 0.00 3.91
4920 10331 8.625467 ATCTCTATTTGTAACTCTAAAGGGGT 57.375 34.615 0.00 0.00 0.00 4.95
5039 10545 2.092291 GCCATTGTTCGCTCGTCGA 61.092 57.895 0.00 0.00 46.88 4.20
5385 10950 2.359975 CCGACCAGTTCAAGCCCC 60.360 66.667 0.00 0.00 0.00 5.80
5416 11224 1.210204 ATCCTGGAGCCCTTTGAGCA 61.210 55.000 1.52 0.00 0.00 4.26
5571 11484 2.036387 TCAACGGAAAGGAGTGACTCA 58.964 47.619 15.33 0.00 31.08 3.41
5744 12772 5.397899 CCAGGGGAAATCATCAGCTACTAAA 60.398 44.000 0.00 0.00 0.00 1.85
5746 12774 6.429385 CAGGGGAAATCATCAGCTACTAAATC 59.571 42.308 0.00 0.00 0.00 2.17
5748 12776 7.001073 GGGGAAATCATCAGCTACTAAATCTT 58.999 38.462 0.00 0.00 0.00 2.40
5749 12777 7.174080 GGGGAAATCATCAGCTACTAAATCTTC 59.826 40.741 0.00 0.00 0.00 2.87
5858 12899 2.721231 TGCACGAGCCTGCAAAAC 59.279 55.556 1.39 0.00 44.28 2.43
5859 12900 2.427410 GCACGAGCCTGCAAAACG 60.427 61.111 0.00 0.00 37.11 3.60
5877 12945 5.369947 AAACGAAACGAACTGAAAAATGC 57.630 34.783 0.00 0.00 0.00 3.56
5917 13013 3.125316 GCAAACAAGCAAAAGCAGATGA 58.875 40.909 0.00 0.00 0.00 2.92
5948 13045 2.031333 GGTCTCTGTTTCAGCAAAGCAG 60.031 50.000 8.72 8.72 44.92 4.24
6029 13126 4.163441 TGGACAGAAATCAAGAACCACA 57.837 40.909 0.00 0.00 0.00 4.17
6057 13189 6.037610 GTGCTCCCAAAGTGTATAGATTGAAG 59.962 42.308 0.00 0.00 0.00 3.02
6095 13227 1.817099 CAACTCCTCGGGCATCAGC 60.817 63.158 0.00 0.00 41.10 4.26
6105 13237 1.700955 GGGCATCAGCTCCAAATCAT 58.299 50.000 0.00 0.00 41.70 2.45
6111 13243 4.261238 GCATCAGCTCCAAATCATCTCAAG 60.261 45.833 0.00 0.00 37.91 3.02
6204 13362 5.009010 ACTGAATGAGGTTGTTCATGTTGTC 59.991 40.000 0.00 0.00 37.83 3.18
6213 13371 3.479489 TGTTCATGTTGTCTGTGATGCT 58.521 40.909 0.00 0.00 0.00 3.79
6296 13456 2.465855 GTACAAAAACCCTTTGCGGTG 58.534 47.619 0.00 0.00 35.83 4.94
6365 13609 1.662517 ACAGTCACAAACATGCACGA 58.337 45.000 0.00 0.00 0.00 4.35
6375 13619 1.730501 ACATGCACGAGAACATCTGG 58.269 50.000 0.00 0.00 0.00 3.86
6401 15177 7.478322 AGAATACATGCTTTAAAGTGATGCAG 58.522 34.615 20.56 9.87 37.07 4.41
6427 15203 1.003580 GAAGTTGGGGAGCACATCTGA 59.996 52.381 0.00 0.00 0.00 3.27
6428 15204 0.326264 AGTTGGGGAGCACATCTGAC 59.674 55.000 0.00 0.00 0.00 3.51
6432 15208 0.463620 GGGGAGCACATCTGACTCTC 59.536 60.000 0.00 0.00 0.00 3.20
6440 15216 0.179116 CATCTGACTCTCGCCACCTG 60.179 60.000 0.00 0.00 0.00 4.00
6460 15236 2.089017 TGCGATGAAGCAACATCCG 58.911 52.632 14.42 11.43 45.06 4.18
6507 15283 0.606673 GCCAAGGAAGGTGGACTCAC 60.607 60.000 0.00 0.00 42.91 3.51
6508 15284 0.764890 CCAAGGAAGGTGGACTCACA 59.235 55.000 0.00 0.00 45.32 3.58
6509 15285 1.271054 CCAAGGAAGGTGGACTCACAG 60.271 57.143 0.00 0.00 45.32 3.66
6510 15286 0.398318 AAGGAAGGTGGACTCACAGC 59.602 55.000 0.00 0.00 45.32 4.40
6511 15287 1.374758 GGAAGGTGGACTCACAGCG 60.375 63.158 0.00 0.00 45.32 5.18
6513 15289 2.788191 GAAGGTGGACTCACAGCGGG 62.788 65.000 0.00 0.00 45.32 6.13
6516 15292 1.080025 GTGGACTCACAGCGGGTAC 60.080 63.158 0.00 0.00 43.13 3.34
6519 15295 0.455005 GGACTCACAGCGGGTACTAC 59.545 60.000 0.00 0.00 0.00 2.73
6520 15296 1.461559 GACTCACAGCGGGTACTACT 58.538 55.000 0.00 0.00 0.00 2.57
6521 15297 1.401199 GACTCACAGCGGGTACTACTC 59.599 57.143 0.00 0.00 0.00 2.59
6522 15298 1.271762 ACTCACAGCGGGTACTACTCA 60.272 52.381 0.00 0.00 0.00 3.41
6523 15299 1.816835 CTCACAGCGGGTACTACTCAA 59.183 52.381 0.00 0.00 0.00 3.02
6524 15300 2.230508 CTCACAGCGGGTACTACTCAAA 59.769 50.000 0.00 0.00 0.00 2.69
6525 15301 2.829720 TCACAGCGGGTACTACTCAAAT 59.170 45.455 0.00 0.00 0.00 2.32
6526 15302 3.119245 TCACAGCGGGTACTACTCAAATC 60.119 47.826 0.00 0.00 0.00 2.17
6529 15305 4.250464 CAGCGGGTACTACTCAAATCAAA 58.750 43.478 0.00 0.00 0.00 2.69
6530 15306 4.876107 CAGCGGGTACTACTCAAATCAAAT 59.124 41.667 0.00 0.00 0.00 2.32
6531 15307 5.006746 CAGCGGGTACTACTCAAATCAAATC 59.993 44.000 0.00 0.00 0.00 2.17
6532 15308 4.025979 GCGGGTACTACTCAAATCAAATCG 60.026 45.833 0.00 0.00 0.00 3.34
6533 15309 5.345702 CGGGTACTACTCAAATCAAATCGA 58.654 41.667 0.00 0.00 0.00 3.59
6535 15311 6.144080 CGGGTACTACTCAAATCAAATCGATC 59.856 42.308 0.00 0.00 31.11 3.69
6537 15313 6.916387 GGTACTACTCAAATCAAATCGATCGA 59.084 38.462 21.86 21.86 31.11 3.59
6538 15314 7.434307 GGTACTACTCAAATCAAATCGATCGAA 59.566 37.037 23.50 5.69 31.11 3.71
6539 15315 7.827819 ACTACTCAAATCAAATCGATCGAAA 57.172 32.000 23.50 8.55 31.11 3.46
6547 15416 9.650371 CAAATCAAATCGATCGAAAGCTATTTA 57.350 29.630 23.50 6.58 31.11 1.40
6624 15579 2.651455 CATCTGCATGAATCCACCACT 58.349 47.619 0.00 0.00 30.57 4.00
6625 15580 3.812262 CATCTGCATGAATCCACCACTA 58.188 45.455 0.00 0.00 30.57 2.74
6626 15581 3.998913 TCTGCATGAATCCACCACTAA 57.001 42.857 0.00 0.00 0.00 2.24
6627 15582 3.609853 TCTGCATGAATCCACCACTAAC 58.390 45.455 0.00 0.00 0.00 2.34
6628 15583 3.008923 TCTGCATGAATCCACCACTAACA 59.991 43.478 0.00 0.00 0.00 2.41
6629 15584 3.758023 CTGCATGAATCCACCACTAACAA 59.242 43.478 0.00 0.00 0.00 2.83
6630 15585 4.343231 TGCATGAATCCACCACTAACAAT 58.657 39.130 0.00 0.00 0.00 2.71
6631 15586 5.504853 TGCATGAATCCACCACTAACAATA 58.495 37.500 0.00 0.00 0.00 1.90
6632 15587 5.948758 TGCATGAATCCACCACTAACAATAA 59.051 36.000 0.00 0.00 0.00 1.40
6709 16111 1.209128 CGATGCCGTCCAATCTGTAC 58.791 55.000 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 8.800332 CCTAAAACGTATAGTGGATAGTATGGT 58.200 37.037 0.00 0.00 0.00 3.55
12 13 8.248945 CCCTAAAACGTATAGTGGATAGTATGG 58.751 40.741 0.00 0.00 0.00 2.74
13 14 8.248945 CCCCTAAAACGTATAGTGGATAGTATG 58.751 40.741 4.44 0.00 0.00 2.39
14 15 7.952368 ACCCCTAAAACGTATAGTGGATAGTAT 59.048 37.037 14.10 0.00 0.00 2.12
15 16 7.297614 ACCCCTAAAACGTATAGTGGATAGTA 58.702 38.462 14.10 0.00 0.00 1.82
17 18 6.661304 ACCCCTAAAACGTATAGTGGATAG 57.339 41.667 14.10 4.26 0.00 2.08
18 19 6.383726 ACAACCCCTAAAACGTATAGTGGATA 59.616 38.462 14.10 0.00 0.00 2.59
20 21 4.531732 ACAACCCCTAAAACGTATAGTGGA 59.468 41.667 14.10 0.00 0.00 4.02
21 22 4.835678 ACAACCCCTAAAACGTATAGTGG 58.164 43.478 7.86 7.86 0.00 4.00
22 23 5.812127 GGTACAACCCCTAAAACGTATAGTG 59.188 44.000 0.00 0.00 30.04 2.74
23 24 5.394115 CGGTACAACCCCTAAAACGTATAGT 60.394 44.000 0.00 0.00 33.75 2.12
24 25 5.043248 CGGTACAACCCCTAAAACGTATAG 58.957 45.833 0.00 0.00 33.75 1.31
25 26 4.707448 TCGGTACAACCCCTAAAACGTATA 59.293 41.667 0.00 0.00 33.75 1.47
26 27 3.513515 TCGGTACAACCCCTAAAACGTAT 59.486 43.478 0.00 0.00 33.75 3.06
27 28 2.894126 TCGGTACAACCCCTAAAACGTA 59.106 45.455 0.00 0.00 33.75 3.57
28 29 1.691434 TCGGTACAACCCCTAAAACGT 59.309 47.619 0.00 0.00 33.75 3.99
29 30 2.453983 TCGGTACAACCCCTAAAACG 57.546 50.000 0.00 0.00 33.75 3.60
33 34 1.002315 GTGCTTCGGTACAACCCCTAA 59.998 52.381 0.00 0.00 33.75 2.69
35 36 1.125711 AGTGCTTCGGTACAACCCCT 61.126 55.000 0.00 0.00 33.75 4.79
36 37 0.672711 GAGTGCTTCGGTACAACCCC 60.673 60.000 0.00 0.00 33.75 4.95
37 38 0.672711 GGAGTGCTTCGGTACAACCC 60.673 60.000 0.00 0.00 33.75 4.11
39 40 0.672711 GGGGAGTGCTTCGGTACAAC 60.673 60.000 0.00 0.00 32.93 3.32
40 41 0.834687 AGGGGAGTGCTTCGGTACAA 60.835 55.000 0.00 0.00 32.93 2.41
41 42 0.834687 AAGGGGAGTGCTTCGGTACA 60.835 55.000 0.00 0.00 32.93 2.90
43 44 0.543410 TGAAGGGGAGTGCTTCGGTA 60.543 55.000 0.00 0.00 0.00 4.02
46 47 1.470098 CATTTGAAGGGGAGTGCTTCG 59.530 52.381 0.00 0.00 0.00 3.79
47 48 2.795329 TCATTTGAAGGGGAGTGCTTC 58.205 47.619 0.00 0.00 0.00 3.86
48 49 2.978156 TCATTTGAAGGGGAGTGCTT 57.022 45.000 0.00 0.00 0.00 3.91
49 50 2.731572 CATCATTTGAAGGGGAGTGCT 58.268 47.619 0.00 0.00 0.00 4.40
50 51 1.135721 GCATCATTTGAAGGGGAGTGC 59.864 52.381 0.00 0.00 0.00 4.40
51 52 2.449464 TGCATCATTTGAAGGGGAGTG 58.551 47.619 0.00 0.00 0.00 3.51
52 53 2.905415 TGCATCATTTGAAGGGGAGT 57.095 45.000 0.00 0.00 0.00 3.85
53 54 3.512724 ACTTTGCATCATTTGAAGGGGAG 59.487 43.478 0.00 0.00 0.00 4.30
54 55 3.509442 ACTTTGCATCATTTGAAGGGGA 58.491 40.909 0.00 0.00 0.00 4.81
55 56 3.967332 ACTTTGCATCATTTGAAGGGG 57.033 42.857 0.00 0.00 0.00 4.79
57 58 5.775686 TCAGAACTTTGCATCATTTGAAGG 58.224 37.500 0.00 0.00 0.00 3.46
58 59 7.063074 GGATTCAGAACTTTGCATCATTTGAAG 59.937 37.037 0.00 0.00 0.00 3.02
59 60 6.869913 GGATTCAGAACTTTGCATCATTTGAA 59.130 34.615 0.00 0.00 0.00 2.69
60 61 6.015265 TGGATTCAGAACTTTGCATCATTTGA 60.015 34.615 0.00 0.00 0.00 2.69
61 62 6.160684 TGGATTCAGAACTTTGCATCATTTG 58.839 36.000 0.00 0.00 0.00 2.32
65 66 5.988310 AATGGATTCAGAACTTTGCATCA 57.012 34.783 0.00 0.00 0.00 3.07
66 67 8.814235 CAAATAATGGATTCAGAACTTTGCATC 58.186 33.333 0.00 0.00 0.00 3.91
67 68 8.533657 TCAAATAATGGATTCAGAACTTTGCAT 58.466 29.630 0.00 0.00 0.00 3.96
68 69 7.894708 TCAAATAATGGATTCAGAACTTTGCA 58.105 30.769 0.00 0.00 0.00 4.08
70 71 9.918630 ACTTCAAATAATGGATTCAGAACTTTG 57.081 29.630 0.00 0.00 0.00 2.77
71 72 9.918630 CACTTCAAATAATGGATTCAGAACTTT 57.081 29.630 0.00 0.00 0.00 2.66
72 73 9.300681 TCACTTCAAATAATGGATTCAGAACTT 57.699 29.630 0.00 0.00 0.00 2.66
73 74 8.868522 TCACTTCAAATAATGGATTCAGAACT 57.131 30.769 0.00 0.00 0.00 3.01
74 75 9.512435 CATCACTTCAAATAATGGATTCAGAAC 57.488 33.333 0.00 0.00 0.00 3.01
77 78 7.434307 GTGCATCACTTCAAATAATGGATTCAG 59.566 37.037 0.00 0.00 0.00 3.02
80 81 7.037438 GTGTGCATCACTTCAAATAATGGATT 58.963 34.615 10.87 0.00 43.13 3.01
81 82 6.406177 GGTGTGCATCACTTCAAATAATGGAT 60.406 38.462 15.74 0.00 45.50 3.41
84 85 4.794762 CGGTGTGCATCACTTCAAATAATG 59.205 41.667 15.74 0.00 45.50 1.90
85 86 4.675146 GCGGTGTGCATCACTTCAAATAAT 60.675 41.667 15.74 0.00 45.50 1.28
86 87 3.365868 GCGGTGTGCATCACTTCAAATAA 60.366 43.478 15.74 0.00 45.50 1.40
89 90 0.310543 GCGGTGTGCATCACTTCAAA 59.689 50.000 15.74 0.00 45.50 2.69
90 91 1.948508 GCGGTGTGCATCACTTCAA 59.051 52.632 15.74 0.00 45.50 2.69
91 92 3.654201 GCGGTGTGCATCACTTCA 58.346 55.556 15.74 0.00 45.50 3.02
109 110 1.446272 GAGAACGAGAGGGGTTGCG 60.446 63.158 0.00 0.00 0.00 4.85
110 111 1.079057 GGAGAACGAGAGGGGTTGC 60.079 63.158 0.00 0.00 0.00 4.17
111 112 0.247736 CTGGAGAACGAGAGGGGTTG 59.752 60.000 0.00 0.00 0.00 3.77
113 114 1.305381 CCTGGAGAACGAGAGGGGT 60.305 63.158 0.00 0.00 0.00 4.95
114 115 2.726351 GCCTGGAGAACGAGAGGGG 61.726 68.421 0.00 0.00 0.00 4.79
115 116 2.896443 GCCTGGAGAACGAGAGGG 59.104 66.667 0.00 0.00 0.00 4.30
116 117 2.046864 TCGCCTGGAGAACGAGAGG 61.047 63.158 0.00 0.00 0.00 3.69
117 118 3.592070 TCGCCTGGAGAACGAGAG 58.408 61.111 0.00 0.00 0.00 3.20
120 121 2.282958 ACCTCGCCTGGAGAACGA 60.283 61.111 0.83 0.00 46.23 3.85
121 122 2.125912 CACCTCGCCTGGAGAACG 60.126 66.667 0.83 0.00 46.23 3.95
122 123 1.374758 CACACCTCGCCTGGAGAAC 60.375 63.158 0.83 0.00 46.23 3.01
125 126 4.767255 GGCACACCTCGCCTGGAG 62.767 72.222 0.00 0.00 46.56 3.86
165 166 4.593864 GTCGCTCCTCATCCGCCC 62.594 72.222 0.00 0.00 0.00 6.13
166 167 3.838271 TGTCGCTCCTCATCCGCC 61.838 66.667 0.00 0.00 0.00 6.13
167 168 2.583593 GTGTCGCTCCTCATCCGC 60.584 66.667 0.00 0.00 0.00 5.54
168 169 0.389817 TTTGTGTCGCTCCTCATCCG 60.390 55.000 0.00 0.00 0.00 4.18
169 170 1.079503 GTTTGTGTCGCTCCTCATCC 58.920 55.000 0.00 0.00 0.00 3.51
171 172 0.687354 AGGTTTGTGTCGCTCCTCAT 59.313 50.000 0.00 0.00 0.00 2.90
173 174 0.318762 AGAGGTTTGTGTCGCTCCTC 59.681 55.000 11.89 11.89 43.29 3.71
176 177 1.544691 TCCTAGAGGTTTGTGTCGCTC 59.455 52.381 0.00 0.00 36.34 5.03
177 178 1.272769 GTCCTAGAGGTTTGTGTCGCT 59.727 52.381 0.00 0.00 36.34 4.93
179 180 1.402456 CCGTCCTAGAGGTTTGTGTCG 60.402 57.143 0.00 0.00 36.34 4.35
181 182 0.320697 GCCGTCCTAGAGGTTTGTGT 59.679 55.000 0.00 0.00 36.34 3.72
182 183 0.736325 CGCCGTCCTAGAGGTTTGTG 60.736 60.000 0.00 0.00 36.34 3.33
183 184 0.896940 TCGCCGTCCTAGAGGTTTGT 60.897 55.000 0.00 0.00 36.34 2.83
184 185 0.458025 GTCGCCGTCCTAGAGGTTTG 60.458 60.000 0.00 0.00 36.34 2.93
185 186 1.888736 GTCGCCGTCCTAGAGGTTT 59.111 57.895 0.00 0.00 36.34 3.27
186 187 2.404995 CGTCGCCGTCCTAGAGGTT 61.405 63.158 0.00 0.00 36.34 3.50
187 188 2.823147 CGTCGCCGTCCTAGAGGT 60.823 66.667 0.00 0.00 36.34 3.85
188 189 4.253257 GCGTCGCCGTCCTAGAGG 62.253 72.222 5.75 0.00 36.15 3.69
189 190 4.592936 CGCGTCGCCGTCCTAGAG 62.593 72.222 12.44 0.00 36.15 2.43
206 207 3.706373 TCAGCGTCAAGGAGGGCC 61.706 66.667 0.00 0.00 0.00 5.80
207 208 2.435059 GTCAGCGTCAAGGAGGGC 60.435 66.667 0.00 0.00 0.00 5.19
208 209 1.949847 ATCGTCAGCGTCAAGGAGGG 61.950 60.000 0.00 0.00 39.49 4.30
209 210 0.526524 GATCGTCAGCGTCAAGGAGG 60.527 60.000 0.00 0.00 39.49 4.30
210 211 0.453793 AGATCGTCAGCGTCAAGGAG 59.546 55.000 0.00 0.00 39.49 3.69
211 212 0.452184 GAGATCGTCAGCGTCAAGGA 59.548 55.000 0.00 0.00 39.49 3.36
212 213 0.171231 TGAGATCGTCAGCGTCAAGG 59.829 55.000 0.00 0.00 39.49 3.61
213 214 1.916651 CTTGAGATCGTCAGCGTCAAG 59.083 52.381 4.74 4.74 40.07 3.02
214 215 1.982612 CTTGAGATCGTCAGCGTCAA 58.017 50.000 0.00 0.00 36.21 3.18
270 271 0.250295 TGTGCTCCCTTTCCGTGAAG 60.250 55.000 0.00 0.00 0.00 3.02
288 289 0.445436 GCGACAGGTCTGAATTGCTG 59.555 55.000 4.84 0.00 0.00 4.41
301 302 3.632604 TCTTCCTGGTAATCTAGCGACAG 59.367 47.826 0.00 0.00 0.00 3.51
316 317 5.327091 CACGTCATAGCAATTTTCTTCCTG 58.673 41.667 0.00 0.00 0.00 3.86
318 319 4.098416 GCACGTCATAGCAATTTTCTTCC 58.902 43.478 0.00 0.00 0.00 3.46
348 349 5.353938 GCATATTGTGATTTGTGCCTTCAT 58.646 37.500 0.00 0.00 0.00 2.57
411 413 6.458478 GCACGTTCAGTAATTAGCTCTCTCTA 60.458 42.308 0.00 0.00 0.00 2.43
457 2598 2.378445 TTTGGACAATCGATCGCTGA 57.622 45.000 19.79 0.90 0.00 4.26
459 2600 2.905075 TGATTTGGACAATCGATCGCT 58.095 42.857 11.09 0.00 0.00 4.93
551 2694 7.971201 TGCATACCTCTCTAATTCATCAGAAT 58.029 34.615 0.00 0.00 46.20 2.40
552 2695 7.365497 TGCATACCTCTCTAATTCATCAGAA 57.635 36.000 0.00 0.00 38.31 3.02
553 2696 6.983906 TGCATACCTCTCTAATTCATCAGA 57.016 37.500 0.00 0.00 0.00 3.27
557 2700 8.432013 TGTTGTATGCATACCTCTCTAATTCAT 58.568 33.333 29.36 0.00 32.33 2.57
559 2702 8.715998 CATGTTGTATGCATACCTCTCTAATTC 58.284 37.037 29.36 9.33 32.33 2.17
560 2703 8.432013 TCATGTTGTATGCATACCTCTCTAATT 58.568 33.333 29.36 8.89 32.33 1.40
565 2708 5.359756 TGTCATGTTGTATGCATACCTCTC 58.640 41.667 29.36 18.13 32.33 3.20
618 4033 3.073062 GCCACTCCCATTGTATATGGTCT 59.927 47.826 3.34 0.00 37.48 3.85
619 4034 3.412386 GCCACTCCCATTGTATATGGTC 58.588 50.000 3.34 0.00 37.48 4.02
620 4035 2.108250 GGCCACTCCCATTGTATATGGT 59.892 50.000 0.00 0.00 37.48 3.55
621 4036 2.795329 GGCCACTCCCATTGTATATGG 58.205 52.381 0.00 0.00 38.88 2.74
623 4038 1.351017 CCGGCCACTCCCATTGTATAT 59.649 52.381 2.24 0.00 0.00 0.86
624 4039 0.762418 CCGGCCACTCCCATTGTATA 59.238 55.000 2.24 0.00 0.00 1.47
756 4250 1.001520 TGTGGGTCAGGTAACACATCG 59.998 52.381 0.00 0.00 38.76 3.84
962 4612 5.463724 GGACAGGACAGCTTATCTTTATTCG 59.536 44.000 0.00 0.00 0.00 3.34
968 4619 4.851639 AATGGACAGGACAGCTTATCTT 57.148 40.909 0.00 0.00 0.00 2.40
979 4630 3.716872 GAGGGAAAGGATAATGGACAGGA 59.283 47.826 0.00 0.00 0.00 3.86
980 4631 3.718956 AGAGGGAAAGGATAATGGACAGG 59.281 47.826 0.00 0.00 0.00 4.00
999 4653 4.277672 CCATATTGGTCAGAAATGGCAGAG 59.722 45.833 0.00 0.00 31.39 3.35
1749 5844 4.041567 TCAGAGAAGGAAGCATGTTAACCA 59.958 41.667 2.48 0.00 0.00 3.67
1792 5887 5.706369 AGATATAGTACCATCGAGTCCACAC 59.294 44.000 0.00 0.00 0.00 3.82
1813 5908 6.543831 GGTTGGAAATTGATGTACTAGCAGAT 59.456 38.462 0.00 0.00 0.00 2.90
1820 5915 5.473504 GTGTGAGGTTGGAAATTGATGTACT 59.526 40.000 0.00 0.00 0.00 2.73
1821 5916 5.240623 TGTGTGAGGTTGGAAATTGATGTAC 59.759 40.000 0.00 0.00 0.00 2.90
1829 5924 4.728772 TCAAGATGTGTGAGGTTGGAAAT 58.271 39.130 0.00 0.00 0.00 2.17
1849 5944 2.608623 TCAGACACATCAAGGACCTCA 58.391 47.619 0.00 0.00 0.00 3.86
1867 5962 6.352737 GGGAAGGTATTCTCAAGGTGTTATCA 60.353 42.308 0.00 0.00 35.82 2.15
1868 5963 6.056236 GGGAAGGTATTCTCAAGGTGTTATC 58.944 44.000 0.00 0.00 35.82 1.75
1879 5974 4.023291 TGCCAAATTGGGAAGGTATTCTC 58.977 43.478 14.59 0.00 33.84 2.87
1881 5976 4.817318 TTGCCAAATTGGGAAGGTATTC 57.183 40.909 15.06 0.00 43.15 1.75
1924 6019 6.316140 TGGGATAAGAATTCAAACTCACATCG 59.684 38.462 8.44 0.00 0.00 3.84
1935 6030 9.511272 CATGATCTACATTGGGATAAGAATTCA 57.489 33.333 8.44 0.00 37.07 2.57
1948 6043 5.066764 TGACAACCATGCATGATCTACATTG 59.933 40.000 28.31 18.87 37.07 2.82
1949 6044 5.066893 GTGACAACCATGCATGATCTACATT 59.933 40.000 28.31 7.33 37.07 2.71
1950 6045 4.577693 GTGACAACCATGCATGATCTACAT 59.422 41.667 28.31 6.37 40.17 2.29
1954 6049 2.011947 CGTGACAACCATGCATGATCT 58.988 47.619 28.31 8.71 0.00 2.75
1959 6054 1.002430 AGAGACGTGACAACCATGCAT 59.998 47.619 0.00 0.00 35.17 3.96
1970 6065 1.069159 GCTCAACGAAGAGAGACGTGA 60.069 52.381 11.94 0.00 42.43 4.35
1983 6078 2.349590 TCATGTCAAGATGGCTCAACG 58.650 47.619 0.00 0.00 0.00 4.10
2005 6100 3.055458 TCGCAGAACCAAGATCCACATAA 60.055 43.478 0.00 0.00 0.00 1.90
2006 6101 2.499693 TCGCAGAACCAAGATCCACATA 59.500 45.455 0.00 0.00 0.00 2.29
2007 6102 1.278985 TCGCAGAACCAAGATCCACAT 59.721 47.619 0.00 0.00 0.00 3.21
2018 6113 0.322546 AACCAATCCCTCGCAGAACC 60.323 55.000 0.00 0.00 34.09 3.62
2025 6120 2.289694 ACACTCTGAAACCAATCCCTCG 60.290 50.000 0.00 0.00 0.00 4.63
2029 6124 7.067494 AGCATATTAACACTCTGAAACCAATCC 59.933 37.037 0.00 0.00 0.00 3.01
2030 6125 7.989826 AGCATATTAACACTCTGAAACCAATC 58.010 34.615 0.00 0.00 0.00 2.67
2031 6126 7.944729 AGCATATTAACACTCTGAAACCAAT 57.055 32.000 0.00 0.00 0.00 3.16
2034 6129 6.599638 AGGAAGCATATTAACACTCTGAAACC 59.400 38.462 0.00 0.00 0.00 3.27
2041 6136 9.601217 TTAAGAGAAGGAAGCATATTAACACTC 57.399 33.333 0.00 0.00 0.00 3.51
2044 6139 9.959721 ACTTTAAGAGAAGGAAGCATATTAACA 57.040 29.630 0.00 0.00 0.00 2.41
2050 6145 7.607991 CCAAGAACTTTAAGAGAAGGAAGCATA 59.392 37.037 0.00 0.00 0.00 3.14
2058 6153 6.293680 GGACAAGCCAAGAACTTTAAGAGAAG 60.294 42.308 0.00 0.00 36.34 2.85
2075 6170 2.112297 TCCACAACCGGACAAGCC 59.888 61.111 9.46 0.00 0.00 4.35
2083 6178 0.813610 TGCTGTTGAGTCCACAACCG 60.814 55.000 0.00 0.00 46.32 4.44
2342 6446 4.213906 GGTCAAATTGCACAAATTTCCCAG 59.786 41.667 0.00 0.00 44.88 4.45
2381 6485 5.545658 ATGCTTGAACCTATGTTGTTACG 57.454 39.130 0.00 0.00 33.97 3.18
2527 6631 3.438087 ACATGTTTTGAGATGCTCGAAGG 59.562 43.478 0.00 0.00 35.58 3.46
2532 6636 5.152097 CAGTCAACATGTTTTGAGATGCTC 58.848 41.667 8.77 0.00 36.15 4.26
2579 6683 4.516698 CAGCCATTTCAAACTACTCAGTGT 59.483 41.667 0.00 0.00 34.36 3.55
2589 6693 3.305608 CCTGAGGTTCAGCCATTTCAAAC 60.306 47.826 0.54 0.00 42.98 2.93
2728 7126 6.342111 CAAAACCTTTAAGTTGCCTAAACCA 58.658 36.000 0.00 0.00 39.85 3.67
2729 7127 5.756347 CCAAAACCTTTAAGTTGCCTAAACC 59.244 40.000 0.00 0.00 39.85 3.27
2730 7128 6.575267 TCCAAAACCTTTAAGTTGCCTAAAC 58.425 36.000 0.00 0.00 39.24 2.01
2731 7129 6.684362 GCTCCAAAACCTTTAAGTTGCCTAAA 60.684 38.462 0.00 0.00 0.00 1.85
2732 7130 5.221362 GCTCCAAAACCTTTAAGTTGCCTAA 60.221 40.000 0.00 0.00 0.00 2.69
2733 7131 4.279922 GCTCCAAAACCTTTAAGTTGCCTA 59.720 41.667 0.00 0.00 0.00 3.93
2734 7132 3.069586 GCTCCAAAACCTTTAAGTTGCCT 59.930 43.478 0.00 0.00 0.00 4.75
2735 7133 3.069586 AGCTCCAAAACCTTTAAGTTGCC 59.930 43.478 0.00 0.00 0.00 4.52
2736 7134 4.322080 AGCTCCAAAACCTTTAAGTTGC 57.678 40.909 0.00 0.00 0.00 4.17
2737 7135 5.920840 GCTAAGCTCCAAAACCTTTAAGTTG 59.079 40.000 0.00 0.00 0.00 3.16
2738 7136 5.833667 AGCTAAGCTCCAAAACCTTTAAGTT 59.166 36.000 0.00 0.00 30.62 2.66
2739 7137 5.386060 AGCTAAGCTCCAAAACCTTTAAGT 58.614 37.500 0.00 0.00 30.62 2.24
2740 7138 5.966742 AGCTAAGCTCCAAAACCTTTAAG 57.033 39.130 0.00 0.00 30.62 1.85
2741 7139 6.300703 TGTAGCTAAGCTCCAAAACCTTTAA 58.699 36.000 0.00 0.00 40.44 1.52
2742 7140 5.871834 TGTAGCTAAGCTCCAAAACCTTTA 58.128 37.500 0.00 0.00 40.44 1.85
2743 7141 4.725490 TGTAGCTAAGCTCCAAAACCTTT 58.275 39.130 0.00 0.00 40.44 3.11
2744 7142 4.367039 TGTAGCTAAGCTCCAAAACCTT 57.633 40.909 0.00 0.00 40.44 3.50
2745 7143 4.367039 TTGTAGCTAAGCTCCAAAACCT 57.633 40.909 0.00 0.00 40.44 3.50
2746 7144 6.364945 CTATTGTAGCTAAGCTCCAAAACC 57.635 41.667 0.00 0.00 37.96 3.27
2761 7159 9.371136 TCTTTCACACTATTGAAGCTATTGTAG 57.629 33.333 0.00 0.00 36.84 2.74
2762 7160 9.719355 TTCTTTCACACTATTGAAGCTATTGTA 57.281 29.630 0.00 0.00 36.84 2.41
2763 7161 8.507249 GTTCTTTCACACTATTGAAGCTATTGT 58.493 33.333 0.00 0.00 36.84 2.71
2764 7162 8.506437 TGTTCTTTCACACTATTGAAGCTATTG 58.494 33.333 0.00 0.00 36.84 1.90
2765 7163 8.621532 TGTTCTTTCACACTATTGAAGCTATT 57.378 30.769 0.00 0.00 36.84 1.73
2766 7164 8.621532 TTGTTCTTTCACACTATTGAAGCTAT 57.378 30.769 0.00 0.00 36.84 2.97
2767 7165 8.621532 ATTGTTCTTTCACACTATTGAAGCTA 57.378 30.769 0.00 0.00 36.84 3.32
2768 7166 6.942532 TTGTTCTTTCACACTATTGAAGCT 57.057 33.333 0.00 0.00 36.84 3.74
2769 7167 8.482429 CAAATTGTTCTTTCACACTATTGAAGC 58.518 33.333 0.00 0.00 36.84 3.86
2770 7168 8.482429 GCAAATTGTTCTTTCACACTATTGAAG 58.518 33.333 0.00 0.00 36.84 3.02
2771 7169 7.978414 TGCAAATTGTTCTTTCACACTATTGAA 59.022 29.630 0.00 0.00 33.55 2.69
2772 7170 7.487484 TGCAAATTGTTCTTTCACACTATTGA 58.513 30.769 0.00 0.00 0.00 2.57
2773 7171 7.697352 TGCAAATTGTTCTTTCACACTATTG 57.303 32.000 0.00 0.00 0.00 1.90
2774 7172 7.042523 GCTTGCAAATTGTTCTTTCACACTATT 60.043 33.333 0.00 0.00 0.00 1.73
2775 7173 6.421801 GCTTGCAAATTGTTCTTTCACACTAT 59.578 34.615 0.00 0.00 0.00 2.12
2776 7174 5.748152 GCTTGCAAATTGTTCTTTCACACTA 59.252 36.000 0.00 0.00 0.00 2.74
2777 7175 4.567959 GCTTGCAAATTGTTCTTTCACACT 59.432 37.500 0.00 0.00 0.00 3.55
2778 7176 4.567959 AGCTTGCAAATTGTTCTTTCACAC 59.432 37.500 0.00 0.00 0.00 3.82
2779 7177 4.757594 AGCTTGCAAATTGTTCTTTCACA 58.242 34.783 0.00 0.00 0.00 3.58
2780 7178 5.723492 AAGCTTGCAAATTGTTCTTTCAC 57.277 34.783 0.00 0.00 0.00 3.18
2791 7189 7.038048 GCTCTAATTTTCCTAAGCTTGCAAAT 58.962 34.615 9.86 5.32 0.00 2.32
2959 8365 4.525912 ATTGTGGCTGAGGTTCAAATTC 57.474 40.909 0.00 0.00 0.00 2.17
2960 8366 5.539955 AGTTATTGTGGCTGAGGTTCAAATT 59.460 36.000 0.00 0.00 0.00 1.82
2961 8367 5.079643 AGTTATTGTGGCTGAGGTTCAAAT 58.920 37.500 0.00 0.00 0.00 2.32
2962 8368 4.469657 AGTTATTGTGGCTGAGGTTCAAA 58.530 39.130 0.00 0.00 0.00 2.69
2963 8369 4.098914 AGTTATTGTGGCTGAGGTTCAA 57.901 40.909 0.00 0.00 0.00 2.69
2964 8370 3.788227 AGTTATTGTGGCTGAGGTTCA 57.212 42.857 0.00 0.00 0.00 3.18
2965 8371 4.072131 TGAAGTTATTGTGGCTGAGGTTC 58.928 43.478 0.00 0.00 0.00 3.62
2966 8372 4.098914 TGAAGTTATTGTGGCTGAGGTT 57.901 40.909 0.00 0.00 0.00 3.50
2967 8373 3.788227 TGAAGTTATTGTGGCTGAGGT 57.212 42.857 0.00 0.00 0.00 3.85
2968 8374 3.820467 TGTTGAAGTTATTGTGGCTGAGG 59.180 43.478 0.00 0.00 0.00 3.86
2969 8375 4.516698 ACTGTTGAAGTTATTGTGGCTGAG 59.483 41.667 0.00 0.00 34.57 3.35
2970 8376 4.275689 CACTGTTGAAGTTATTGTGGCTGA 59.724 41.667 0.00 0.00 36.83 4.26
2971 8377 4.036734 ACACTGTTGAAGTTATTGTGGCTG 59.963 41.667 0.00 0.00 36.83 4.85
2972 8378 4.036734 CACACTGTTGAAGTTATTGTGGCT 59.963 41.667 0.00 0.00 36.83 4.75
2973 8379 4.036262 TCACACTGTTGAAGTTATTGTGGC 59.964 41.667 0.00 0.00 36.83 5.01
2974 8380 5.749596 TCACACTGTTGAAGTTATTGTGG 57.250 39.130 0.00 0.00 36.83 4.17
2975 8381 7.471721 TCTTTCACACTGTTGAAGTTATTGTG 58.528 34.615 0.00 0.00 36.83 3.33
2976 8382 7.624360 TCTTTCACACTGTTGAAGTTATTGT 57.376 32.000 5.85 0.00 36.83 2.71
2977 8383 7.967854 TGTTCTTTCACACTGTTGAAGTTATTG 59.032 33.333 5.85 0.00 36.83 1.90
2978 8384 8.050778 TGTTCTTTCACACTGTTGAAGTTATT 57.949 30.769 5.85 0.00 36.83 1.40
2979 8385 7.624360 TGTTCTTTCACACTGTTGAAGTTAT 57.376 32.000 5.85 0.00 36.83 1.89
2980 8386 7.624360 ATGTTCTTTCACACTGTTGAAGTTA 57.376 32.000 5.85 0.00 36.83 2.24
2981 8387 5.957842 TGTTCTTTCACACTGTTGAAGTT 57.042 34.783 5.85 0.00 36.83 2.66
2982 8388 6.515272 AATGTTCTTTCACACTGTTGAAGT 57.485 33.333 5.85 0.00 40.93 3.01
2983 8389 7.669098 CAAAATGTTCTTTCACACTGTTGAAG 58.331 34.615 5.85 0.00 36.84 3.02
2984 8390 6.090628 GCAAAATGTTCTTTCACACTGTTGAA 59.909 34.615 0.00 2.66 33.55 2.69
2985 8391 5.576384 GCAAAATGTTCTTTCACACTGTTGA 59.424 36.000 0.00 0.00 0.00 3.18
2986 8392 5.348179 TGCAAAATGTTCTTTCACACTGTTG 59.652 36.000 0.00 0.00 0.00 3.33
2987 8393 5.477510 TGCAAAATGTTCTTTCACACTGTT 58.522 33.333 0.00 0.00 0.00 3.16
2988 8394 5.070770 TGCAAAATGTTCTTTCACACTGT 57.929 34.783 0.00 0.00 0.00 3.55
2989 8395 5.577945 ACTTGCAAAATGTTCTTTCACACTG 59.422 36.000 0.00 0.00 0.00 3.66
2990 8396 5.723295 ACTTGCAAAATGTTCTTTCACACT 58.277 33.333 0.00 0.00 0.00 3.55
2991 8397 6.407475 AACTTGCAAAATGTTCTTTCACAC 57.593 33.333 0.00 0.00 0.00 3.82
2992 8398 6.183360 CGAAACTTGCAAAATGTTCTTTCACA 60.183 34.615 0.00 0.00 0.00 3.58
2993 8399 6.177822 CGAAACTTGCAAAATGTTCTTTCAC 58.822 36.000 0.00 0.00 0.00 3.18
2994 8400 5.290643 CCGAAACTTGCAAAATGTTCTTTCA 59.709 36.000 0.00 0.00 0.00 2.69
2995 8401 5.518487 TCCGAAACTTGCAAAATGTTCTTTC 59.482 36.000 0.00 0.00 0.00 2.62
2996 8402 5.415221 TCCGAAACTTGCAAAATGTTCTTT 58.585 33.333 0.00 0.00 0.00 2.52
2997 8403 5.004922 TCCGAAACTTGCAAAATGTTCTT 57.995 34.783 0.00 0.00 0.00 2.52
2998 8404 4.647424 TCCGAAACTTGCAAAATGTTCT 57.353 36.364 0.00 0.00 0.00 3.01
2999 8405 5.489335 GTTTCCGAAACTTGCAAAATGTTC 58.511 37.500 15.47 1.11 38.35 3.18
3000 8406 5.463499 GTTTCCGAAACTTGCAAAATGTT 57.537 34.783 15.47 0.00 38.35 2.71
3012 8418 6.037726 TCCAAAAGCTTTAAGTTTCCGAAAC 58.962 36.000 13.10 15.03 41.69 2.78
3013 8419 6.210287 TCCAAAAGCTTTAAGTTTCCGAAA 57.790 33.333 13.10 0.00 0.00 3.46
3014 8420 5.838531 TCCAAAAGCTTTAAGTTTCCGAA 57.161 34.783 13.10 0.00 0.00 4.30
3015 8421 5.768164 AGATCCAAAAGCTTTAAGTTTCCGA 59.232 36.000 13.10 1.63 0.00 4.55
3016 8422 6.013842 AGATCCAAAAGCTTTAAGTTTCCG 57.986 37.500 13.10 0.00 0.00 4.30
3017 8423 6.981722 TGAGATCCAAAAGCTTTAAGTTTCC 58.018 36.000 13.10 1.45 0.00 3.13
3018 8424 6.584184 GCTGAGATCCAAAAGCTTTAAGTTTC 59.416 38.462 13.10 6.55 32.82 2.78
3019 8425 6.266330 AGCTGAGATCCAAAAGCTTTAAGTTT 59.734 34.615 13.10 0.00 43.33 2.66
3020 8426 5.772169 AGCTGAGATCCAAAAGCTTTAAGTT 59.228 36.000 13.10 1.98 43.33 2.66
3021 8427 5.320277 AGCTGAGATCCAAAAGCTTTAAGT 58.680 37.500 13.10 0.00 43.33 2.24
3022 8428 5.893897 AGCTGAGATCCAAAAGCTTTAAG 57.106 39.130 13.10 8.31 43.33 1.85
3023 8429 6.237901 TGTAGCTGAGATCCAAAAGCTTTAA 58.762 36.000 13.10 1.57 43.33 1.52
3024 8430 5.804639 TGTAGCTGAGATCCAAAAGCTTTA 58.195 37.500 13.10 0.00 43.33 1.85
3025 8431 4.655963 TGTAGCTGAGATCCAAAAGCTTT 58.344 39.130 5.69 5.69 43.33 3.51
3026 8432 4.292186 TGTAGCTGAGATCCAAAAGCTT 57.708 40.909 12.55 0.00 43.33 3.74
3028 8434 3.753272 TGTTGTAGCTGAGATCCAAAAGC 59.247 43.478 0.00 0.00 35.86 3.51
3073 8479 6.995686 TGTTACCTAGACTTGCAAAATCTTCA 59.004 34.615 15.94 1.64 0.00 3.02
3089 8495 4.576463 GTCCAAATGCTCCATGTTACCTAG 59.424 45.833 0.00 0.00 0.00 3.02
3098 8504 1.684248 GCTGAGGTCCAAATGCTCCAT 60.684 52.381 0.00 0.00 0.00 3.41
3163 8569 9.941325 AGATCCAGATGCTTTATATTACTTGAG 57.059 33.333 0.00 0.00 0.00 3.02
3167 8573 9.883142 GCTAAGATCCAGATGCTTTATATTACT 57.117 33.333 0.00 0.00 0.00 2.24
3173 8579 5.573380 TGGCTAAGATCCAGATGCTTTAT 57.427 39.130 0.00 0.00 0.00 1.40
3203 8609 3.206964 TCTCCACGAGCACACTATCTAG 58.793 50.000 0.00 0.00 0.00 2.43
3224 8630 2.833338 TCAATAGGCCTGCAAAATGCTT 59.167 40.909 17.99 0.00 45.31 3.91
3274 8680 7.523293 TTGGTTGATAGCAAATCTCAAAGAA 57.477 32.000 0.00 0.00 38.71 2.52
3311 8717 9.353999 GAATTTCGCAACCTTTAATCTAAATGT 57.646 29.630 0.00 0.00 0.00 2.71
3322 8728 4.599047 TGATTGGAATTTCGCAACCTTT 57.401 36.364 3.44 0.00 0.00 3.11
3376 8782 8.358148 AGAACATCAATATCAGATTGCCATTTC 58.642 33.333 0.00 0.00 0.00 2.17
3424 8830 8.472413 CAAAACCAATCAGGAATAACATCATCT 58.528 33.333 0.00 0.00 41.22 2.90
3515 8921 5.049198 CAGCTGACATGTGTTGTAGATTTGT 60.049 40.000 8.42 0.00 39.18 2.83
3564 8972 1.948104 TGGAACTTGACCTGTCAACG 58.052 50.000 8.58 7.92 43.90 4.10
3596 9004 4.707448 AGATAGGTCCAGTCGGCTTATATG 59.293 45.833 0.00 0.00 0.00 1.78
3640 9048 3.012518 AGCATACAACTCAGATGGCAAC 58.987 45.455 0.00 0.00 0.00 4.17
4085 9493 3.550437 AGGTATGCTTCCTGACATGTC 57.450 47.619 19.27 19.27 33.62 3.06
4105 9513 4.381505 GCCTTCAAGTTTGACAAAGACCAA 60.382 41.667 0.00 0.00 36.83 3.67
4140 9548 1.681264 CCTTTGTGTCCTGTGAAACCC 59.319 52.381 0.00 0.00 34.36 4.11
4144 9552 5.304686 AGTAATCCTTTGTGTCCTGTGAA 57.695 39.130 0.00 0.00 0.00 3.18
4279 9687 6.335781 AGTAGAGTTATCTCCTCTGGAACT 57.664 41.667 0.00 0.00 39.57 3.01
4304 9712 2.039084 AGTTCAGGCTGGTAAGTCCAAG 59.961 50.000 15.73 0.00 46.59 3.61
4375 9783 1.009389 CGAGTGACTCCAACCGCTTC 61.009 60.000 7.07 0.00 0.00 3.86
4502 9910 2.808543 GAGTTTGTAGCTGTTGTCCAGG 59.191 50.000 0.00 0.00 41.81 4.45
4605 10013 1.743252 CCGAGGCCACTTTGCTCTC 60.743 63.158 5.01 0.00 0.00 3.20
4623 10031 8.668510 AACGGATGGCATATGATTTATATCTC 57.331 34.615 6.97 0.00 29.37 2.75
4662 10070 4.017591 ACAGACCCATCACAAATCCCATAA 60.018 41.667 0.00 0.00 0.00 1.90
4663 10071 3.527253 ACAGACCCATCACAAATCCCATA 59.473 43.478 0.00 0.00 0.00 2.74
4666 10074 2.094675 CACAGACCCATCACAAATCCC 58.905 52.381 0.00 0.00 0.00 3.85
4765 10173 1.266718 ACAGCCACTTGCACATAAACG 59.733 47.619 0.00 0.00 44.83 3.60
4920 10331 3.196901 ACAATACATACGTCCAGCCAAGA 59.803 43.478 0.00 0.00 0.00 3.02
4978 10472 6.969043 TCCCCAGACATATACACTTCATTTT 58.031 36.000 0.00 0.00 0.00 1.82
5039 10545 1.816835 CTTTCTCCATGCAGTGCACAT 59.183 47.619 22.44 1.76 43.04 3.21
5211 10740 5.519808 TCTACCTCTTGCCTCTTGAATCTA 58.480 41.667 0.00 0.00 0.00 1.98
5416 11224 3.112075 CGATGCAGGCGTGTTCGT 61.112 61.111 19.10 2.91 39.49 3.85
5571 11484 1.705186 AGTTCCTGGGTGCTGTAACAT 59.295 47.619 0.00 0.00 0.00 2.71
5611 11547 4.849813 ATGTCCATCATGAGAACCAGAA 57.150 40.909 0.09 0.00 35.19 3.02
5744 12772 7.530426 AAACAGAGTTTAAATGGCTGAAGAT 57.470 32.000 16.72 3.52 0.00 2.40
5746 12774 5.853282 CGAAACAGAGTTTAAATGGCTGAAG 59.147 40.000 16.72 6.01 0.00 3.02
5748 12776 4.215399 CCGAAACAGAGTTTAAATGGCTGA 59.785 41.667 16.72 0.00 0.00 4.26
5749 12777 4.475944 CCGAAACAGAGTTTAAATGGCTG 58.524 43.478 11.18 11.18 0.00 4.85
5858 12899 5.368552 TTTGCATTTTTCAGTTCGTTTCG 57.631 34.783 0.00 0.00 0.00 3.46
5859 12900 6.529696 TGTTTTGCATTTTTCAGTTCGTTTC 58.470 32.000 0.00 0.00 0.00 2.78
5877 12945 4.861389 TGCTTGTTTCAGCATTGTTTTG 57.139 36.364 0.00 0.00 45.14 2.44
5917 13013 8.034313 TGCTGAAACAGAGACCCTTATATATT 57.966 34.615 2.81 0.00 32.44 1.28
5948 13045 3.092511 TCTGCTGATCCTGGGGGC 61.093 66.667 0.00 0.00 0.00 5.80
6029 13126 3.844211 TCTATACACTTTGGGAGCACCTT 59.156 43.478 0.00 0.00 41.11 3.50
6057 13189 0.953960 ATTCGAGGCGTTGGTGTTCC 60.954 55.000 0.00 0.00 0.00 3.62
6095 13227 6.468333 TCTCTCTCTTGAGATGATTTGGAG 57.532 41.667 0.41 3.30 46.93 3.86
6204 13362 4.752146 TGTGATCAGACTTAGCATCACAG 58.248 43.478 9.06 0.00 46.47 3.66
6359 13603 1.256812 TCTCCAGATGTTCTCGTGCA 58.743 50.000 0.00 0.00 0.00 4.57
6365 13609 5.627182 AGCATGTATTCTCCAGATGTTCT 57.373 39.130 0.00 0.00 0.00 3.01
6375 13619 7.475015 TGCATCACTTTAAAGCATGTATTCTC 58.525 34.615 20.81 9.78 0.00 2.87
6401 15177 1.609072 GTGCTCCCCAACTTCAAACTC 59.391 52.381 0.00 0.00 0.00 3.01
6427 15203 2.581354 GCATCAGGTGGCGAGAGT 59.419 61.111 0.00 0.00 0.00 3.24
6440 15216 1.333524 CGGATGTTGCTTCATCGCATC 60.334 52.381 12.77 0.00 43.39 3.91
6447 15223 3.430862 GCGGCGGATGTTGCTTCA 61.431 61.111 9.78 0.00 0.00 3.02
6460 15236 2.407616 GGTTATTTCTGCCGCGGC 59.592 61.111 42.35 42.35 42.35 6.53
6466 15242 2.407616 GCCGGCGGTTATTTCTGC 59.592 61.111 28.82 5.42 38.81 4.26
6492 15268 1.821061 CGCTGTGAGTCCACCTTCCT 61.821 60.000 0.00 0.00 42.53 3.36
6497 15273 2.280552 TACCCGCTGTGAGTCCACC 61.281 63.158 0.00 0.00 42.53 4.61
6507 15283 3.520290 TGATTTGAGTAGTACCCGCTG 57.480 47.619 0.00 0.00 0.00 5.18
6508 15284 4.546829 TTTGATTTGAGTAGTACCCGCT 57.453 40.909 0.00 0.00 0.00 5.52
6509 15285 4.025979 CGATTTGATTTGAGTAGTACCCGC 60.026 45.833 0.00 0.00 0.00 6.13
6510 15286 5.345702 TCGATTTGATTTGAGTAGTACCCG 58.654 41.667 0.00 0.00 0.00 5.28
6511 15287 6.144080 CGATCGATTTGATTTGAGTAGTACCC 59.856 42.308 10.26 0.00 37.47 3.69
6513 15289 7.909777 TCGATCGATTTGATTTGAGTAGTAC 57.090 36.000 15.15 0.00 37.47 2.73
6516 15292 6.843279 GCTTTCGATCGATTTGATTTGAGTAG 59.157 38.462 20.18 0.00 37.47 2.57
6519 15295 5.804173 AGCTTTCGATCGATTTGATTTGAG 58.196 37.500 20.18 7.04 37.47 3.02
6520 15296 5.801350 AGCTTTCGATCGATTTGATTTGA 57.199 34.783 20.18 0.00 37.47 2.69
6521 15297 8.552469 AAATAGCTTTCGATCGATTTGATTTG 57.448 30.769 20.18 4.52 37.47 2.32
6624 15579 8.821686 ACCTGAATGATCAACCATTATTGTTA 57.178 30.769 0.00 0.00 36.93 2.41
6625 15580 7.722949 ACCTGAATGATCAACCATTATTGTT 57.277 32.000 0.00 0.00 36.93 2.83
6626 15581 8.821686 TTACCTGAATGATCAACCATTATTGT 57.178 30.769 0.00 0.00 36.93 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.