Multiple sequence alignment - TraesCS6B01G437500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G437500 chr6B 100.000 5788 0 0 1 5788 704437577 704443364 0.000000e+00 10689.0
1 TraesCS6B01G437500 chr6B 98.122 639 12 0 5150 5788 18428440 18429078 0.000000e+00 1114.0
2 TraesCS6B01G437500 chr6B 82.210 905 156 4 1213 2116 704372355 704373255 0.000000e+00 774.0
3 TraesCS6B01G437500 chr6B 81.464 847 147 7 1251 2094 704177940 704177101 0.000000e+00 686.0
4 TraesCS6B01G437500 chr6B 80.390 872 157 13 1251 2116 704183883 704183020 0.000000e+00 651.0
5 TraesCS6B01G437500 chr6B 84.792 480 51 9 382 842 704186574 704187050 4.090000e-126 462.0
6 TraesCS6B01G437500 chr6B 80.614 619 77 24 477 1060 704371539 704372149 6.890000e-119 438.0
7 TraesCS6B01G437500 chr6B 84.573 363 56 0 1 363 122879194 122879556 1.530000e-95 361.0
8 TraesCS6B01G437500 chr6B 92.353 170 12 1 1065 1233 704372251 704372420 2.080000e-59 241.0
9 TraesCS6B01G437500 chr6B 82.812 128 13 8 2197 2319 351675629 351675752 7.930000e-19 106.0
10 TraesCS6B01G437500 chr6B 79.688 128 26 0 1252 1379 704109223 704109096 6.180000e-15 93.5
11 TraesCS6B01G437500 chr2A 93.239 2411 152 9 2674 5079 12508502 12506098 0.000000e+00 3539.0
12 TraesCS6B01G437500 chr2A 91.458 2435 175 24 2665 5079 235439870 235437449 0.000000e+00 3314.0
13 TraesCS6B01G437500 chr2A 91.249 2434 182 25 2665 5080 235455237 235452817 0.000000e+00 3286.0
14 TraesCS6B01G437500 chr2A 77.868 1229 184 49 2506 3690 366173714 366172530 0.000000e+00 682.0
15 TraesCS6B01G437500 chr2A 86.226 363 50 0 1 363 759477277 759476915 1.510000e-105 394.0
16 TraesCS6B01G437500 chr2A 92.754 138 8 2 2314 2450 749872863 749872727 1.270000e-46 198.0
17 TraesCS6B01G437500 chr3B 92.966 2417 154 13 2668 5079 380733004 380730599 0.000000e+00 3507.0
18 TraesCS6B01G437500 chr3B 98.279 639 11 0 5150 5788 152901300 152901938 0.000000e+00 1120.0
19 TraesCS6B01G437500 chr7D 92.150 2446 168 23 2645 5080 442116766 442114335 0.000000e+00 3432.0
20 TraesCS6B01G437500 chr7D 91.749 2424 184 16 2668 5083 442101071 442098656 0.000000e+00 3354.0
21 TraesCS6B01G437500 chr7D 84.770 348 51 2 1 347 452991726 452991380 1.190000e-91 348.0
22 TraesCS6B01G437500 chr7D 93.798 129 7 1 2316 2443 150359299 150359427 5.920000e-45 193.0
23 TraesCS6B01G437500 chr7D 83.333 120 13 6 2205 2319 477030817 477030934 2.850000e-18 104.0
24 TraesCS6B01G437500 chr7D 83.621 116 12 6 2209 2319 477024559 477024672 1.030000e-17 102.0
25 TraesCS6B01G437500 chr1B 91.445 2443 187 20 2645 5080 431183408 431185835 0.000000e+00 3334.0
26 TraesCS6B01G437500 chr1B 91.146 2451 193 21 2638 5080 431174993 431177427 0.000000e+00 3302.0
27 TraesCS6B01G437500 chr1B 92.857 140 8 2 2308 2446 626227014 626226876 9.830000e-48 202.0
28 TraesCS6B01G437500 chr7A 91.050 2447 185 28 2649 5080 231998094 231995667 0.000000e+00 3275.0
29 TraesCS6B01G437500 chr7A 89.224 2682 187 53 2440 5079 223548577 223545956 0.000000e+00 3258.0
30 TraesCS6B01G437500 chr7A 98.122 639 12 0 5150 5788 669077925 669077287 0.000000e+00 1114.0
31 TraesCS6B01G437500 chr7A 95.735 211 3 3 2113 2319 223548782 223548574 9.290000e-88 335.0
32 TraesCS6B01G437500 chr7A 96.063 127 4 1 2318 2443 719561662 719561536 7.600000e-49 206.0
33 TraesCS6B01G437500 chr7A 91.549 142 10 2 2317 2457 15098986 15099126 1.650000e-45 195.0
34 TraesCS6B01G437500 chr7A 85.088 114 11 5 2210 2319 372466374 372466485 1.700000e-20 111.0
35 TraesCS6B01G437500 chr7A 91.139 79 7 0 1 79 198657935 198658013 2.210000e-19 108.0
36 TraesCS6B01G437500 chr6A 93.397 1772 66 21 382 2116 609002478 609004235 0.000000e+00 2577.0
37 TraesCS6B01G437500 chr6A 82.210 905 156 4 1213 2116 608978412 608979312 0.000000e+00 774.0
38 TraesCS6B01G437500 chr6A 80.567 741 138 6 1193 1930 608967800 608968537 3.030000e-157 566.0
39 TraesCS6B01G437500 chr6A 80.325 615 78 28 481 1060 608977600 608978206 5.360000e-115 425.0
40 TraesCS6B01G437500 chr6A 85.598 368 28 8 401 746 608709354 608709718 4.260000e-96 363.0
41 TraesCS6B01G437500 chr6A 83.065 372 34 10 401 746 608967003 608967371 1.570000e-80 311.0
42 TraesCS6B01G437500 chr6A 93.529 170 10 1 1065 1233 608978308 608978477 9.630000e-63 252.0
43 TraesCS6B01G437500 chr6A 95.276 127 5 1 2318 2443 457399355 457399481 3.540000e-47 200.0
44 TraesCS6B01G437500 chr6A 86.957 115 7 6 2210 2319 498657876 498657987 7.880000e-24 122.0
45 TraesCS6B01G437500 chr6A 100.000 28 0 0 383 410 608709280 608709307 1.000000e-02 52.8
46 TraesCS6B01G437500 chr5B 95.783 1494 41 10 642 2116 65770987 65772477 0.000000e+00 2390.0
47 TraesCS6B01G437500 chr5B 98.122 639 12 0 5150 5788 665907903 665908541 0.000000e+00 1114.0
48 TraesCS6B01G437500 chr5B 96.694 363 12 0 1 363 660158534 660158896 6.420000e-169 604.0
49 TraesCS6B01G437500 chr5B 95.317 363 17 0 1 363 583614901 583615263 1.400000e-160 577.0
50 TraesCS6B01G437500 chr5B 81.148 122 12 5 2208 2319 424110153 424110273 2.870000e-13 87.9
51 TraesCS6B01G437500 chr5B 77.869 122 24 3 1 121 537556548 537556429 8.050000e-09 73.1
52 TraesCS6B01G437500 chr5B 80.000 105 10 2 2224 2319 298327219 298327321 3.740000e-07 67.6
53 TraesCS6B01G437500 chr7B 81.898 1486 176 51 2440 3883 147112081 147110647 0.000000e+00 1168.0
54 TraesCS6B01G437500 chr7B 98.279 639 11 0 5150 5788 733032554 733031916 0.000000e+00 1120.0
55 TraesCS6B01G437500 chr7B 98.122 639 12 0 5150 5788 739437424 739438062 0.000000e+00 1114.0
56 TraesCS6B01G437500 chr7B 96.419 363 13 0 1 363 580138630 580138268 2.980000e-167 599.0
57 TraesCS6B01G437500 chr7B 94.203 138 7 1 2310 2446 118126341 118126204 5.880000e-50 209.0
58 TraesCS6B01G437500 chr7B 92.045 88 7 0 1 88 25965395 25965482 2.190000e-24 124.0
59 TraesCS6B01G437500 chr7B 84.874 119 10 6 2208 2321 248391873 248391758 4.740000e-21 113.0
60 TraesCS6B01G437500 chr4A 98.435 639 10 0 5150 5788 686541408 686540770 0.000000e+00 1125.0
61 TraesCS6B01G437500 chr4A 98.122 639 12 0 5150 5788 661350399 661351037 0.000000e+00 1114.0
62 TraesCS6B01G437500 chr4A 94.853 136 6 1 2315 2449 589667297 589667162 1.630000e-50 211.0
63 TraesCS6B01G437500 chr4A 95.420 131 5 1 2314 2443 200095850 200095980 2.110000e-49 207.0
64 TraesCS6B01G437500 chr4A 95.385 130 5 1 2315 2443 719163905 719164034 7.600000e-49 206.0
65 TraesCS6B01G437500 chr4A 91.724 145 6 6 2318 2461 33889286 33889147 4.580000e-46 196.0
66 TraesCS6B01G437500 chrUn 98.122 639 12 0 5150 5788 15363960 15364598 0.000000e+00 1114.0
67 TraesCS6B01G437500 chrUn 94.531 128 6 1 2317 2443 322720409 322720536 4.580000e-46 196.0
68 TraesCS6B01G437500 chrUn 94.488 127 6 1 2318 2443 17025259 17025385 1.650000e-45 195.0
69 TraesCS6B01G437500 chrUn 94.488 127 6 1 2318 2443 17027492 17027618 1.650000e-45 195.0
70 TraesCS6B01G437500 chrUn 94.488 127 6 1 2318 2443 52994438 52994564 1.650000e-45 195.0
71 TraesCS6B01G437500 chrUn 90.845 142 11 2 2315 2455 103517776 103517636 7.660000e-44 189.0
72 TraesCS6B01G437500 chrUn 100.000 74 0 0 5080 5153 84666725 84666798 2.810000e-28 137.0
73 TraesCS6B01G437500 chrUn 100.000 74 0 0 5080 5153 231279297 231279224 2.810000e-28 137.0
74 TraesCS6B01G437500 chrUn 100.000 74 0 0 5080 5153 320094632 320094559 2.810000e-28 137.0
75 TraesCS6B01G437500 chrUn 100.000 74 0 0 5080 5153 389652549 389652476 2.810000e-28 137.0
76 TraesCS6B01G437500 chrUn 100.000 74 0 0 5080 5153 427607032 427607105 2.810000e-28 137.0
77 TraesCS6B01G437500 chrUn 100.000 74 0 0 5080 5153 433146423 433146496 2.810000e-28 137.0
78 TraesCS6B01G437500 chrUn 100.000 74 0 0 5080 5153 447747649 447747576 2.810000e-28 137.0
79 TraesCS6B01G437500 chr6D 80.175 802 114 39 2504 3281 425042740 425041960 5.070000e-155 558.0
80 TraesCS6B01G437500 chr6D 80.075 803 114 39 2504 3281 425051047 425050266 6.550000e-154 555.0
81 TraesCS6B01G437500 chr6D 85.075 469 43 8 401 842 461923222 461923690 2.460000e-123 453.0
82 TraesCS6B01G437500 chr6D 76.348 816 132 48 2504 3281 106347052 106347844 1.180000e-101 381.0
83 TraesCS6B01G437500 chr6D 76.255 817 132 48 2504 3281 106363696 106364489 1.520000e-100 377.0
84 TraesCS6B01G437500 chr6D 94.776 134 4 3 2316 2447 398180162 398180030 7.600000e-49 206.0
85 TraesCS6B01G437500 chr6D 93.077 130 8 1 2315 2443 410401804 410401933 7.660000e-44 189.0
86 TraesCS6B01G437500 chr6D 91.791 134 9 2 2317 2449 303203976 303203844 9.900000e-43 185.0
87 TraesCS6B01G437500 chr6D 92.913 127 8 1 2318 2443 95795776 95795902 3.560000e-42 183.0
88 TraesCS6B01G437500 chr6D 91.729 133 9 2 2318 2449 327309051 327308920 3.560000e-42 183.0
89 TraesCS6B01G437500 chr6D 91.729 133 10 1 2316 2447 420707826 420707694 3.560000e-42 183.0
90 TraesCS6B01G437500 chr6D 92.913 127 8 1 2318 2443 424871764 424871638 3.560000e-42 183.0
91 TraesCS6B01G437500 chr6D 92.913 127 8 1 2318 2443 428779610 428779736 3.560000e-42 183.0
92 TraesCS6B01G437500 chr6D 92.248 129 9 1 2316 2443 450653032 450652904 1.280000e-41 182.0
93 TraesCS6B01G437500 chr6D 86.555 119 12 4 2443 2559 263493906 263493790 1.690000e-25 128.0
94 TraesCS6B01G437500 chr6D 84.058 138 7 7 2195 2320 263494042 263493908 1.020000e-22 119.0
95 TraesCS6B01G437500 chr6D 89.024 82 3 5 2440 2517 225705905 225705826 4.770000e-16 97.1
96 TraesCS6B01G437500 chr1A 93.664 363 23 0 1 363 568723951 568723589 1.420000e-150 544.0
97 TraesCS6B01G437500 chr1A 92.562 363 27 0 1 363 17875975 17876337 6.650000e-144 521.0
98 TraesCS6B01G437500 chr1A 95.455 132 5 1 2315 2445 443664003 443664134 5.880000e-50 209.0
99 TraesCS6B01G437500 chr1A 95.385 130 5 1 2318 2446 176456837 176456708 7.600000e-49 206.0
100 TraesCS6B01G437500 chr1A 95.312 128 5 1 2317 2443 505092520 505092393 9.830000e-48 202.0
101 TraesCS6B01G437500 chr1A 94.615 130 6 1 2318 2446 552145925 552145796 3.540000e-47 200.0
102 TraesCS6B01G437500 chr1A 100.000 74 0 0 5080 5153 564673445 564673372 2.810000e-28 137.0
103 TraesCS6B01G437500 chr1A 100.000 31 0 0 2291 2321 68595528 68595498 2.250000e-04 58.4
104 TraesCS6B01G437500 chr4D 78.806 821 117 43 2501 3281 89311 90114 3.110000e-137 499.0
105 TraesCS6B01G437500 chr4D 91.912 136 10 1 2315 2449 72840821 72840686 7.660000e-44 189.0
106 TraesCS6B01G437500 chr4D 92.537 134 6 3 2315 2446 285902663 285902532 7.660000e-44 189.0
107 TraesCS6B01G437500 chr4D 93.077 130 7 2 2318 2446 356728695 356728823 7.660000e-44 189.0
108 TraesCS6B01G437500 chr4D 86.667 120 11 5 2442 2559 238375271 238375387 1.690000e-25 128.0
109 TraesCS6B01G437500 chr4D 86.066 122 12 5 2440 2559 415771550 415771432 6.090000e-25 126.0
110 TraesCS6B01G437500 chr1D 78.571 686 99 30 2509 3158 165223916 165223243 5.400000e-110 409.0
111 TraesCS6B01G437500 chr1D 94.488 127 6 1 2318 2443 393087777 393087903 1.650000e-45 195.0
112 TraesCS6B01G437500 chr1D 93.750 128 7 1 2318 2444 295224264 295224137 2.130000e-44 191.0
113 TraesCS6B01G437500 chr1D 93.077 130 8 1 2315 2443 178459641 178459512 7.660000e-44 189.0
114 TraesCS6B01G437500 chr1D 93.077 130 8 1 2315 2443 368090968 368091097 7.660000e-44 189.0
115 TraesCS6B01G437500 chr1D 91.912 136 10 1 2309 2443 368493676 368493811 7.660000e-44 189.0
116 TraesCS6B01G437500 chr1D 90.780 141 11 2 2310 2449 488630182 488630321 2.750000e-43 187.0
117 TraesCS6B01G437500 chr1D 91.304 138 9 3 2314 2450 60223747 60223612 9.900000e-43 185.0
118 TraesCS6B01G437500 chr1D 86.885 122 11 5 2440 2559 118373067 118373185 1.310000e-26 132.0
119 TraesCS6B01G437500 chr1D 86.885 122 11 5 2440 2559 118380250 118380368 1.310000e-26 132.0
120 TraesCS6B01G437500 chr1D 86.885 122 11 5 2440 2559 329713501 329713383 1.310000e-26 132.0
121 TraesCS6B01G437500 chr1D 85.833 120 12 5 2442 2559 452562345 452562461 7.880000e-24 122.0
122 TraesCS6B01G437500 chr1D 85.366 123 11 6 2440 2559 358148779 358148661 2.830000e-23 121.0
123 TraesCS6B01G437500 chr2B 85.165 364 52 2 1 363 523797870 523798232 7.080000e-99 372.0
124 TraesCS6B01G437500 chr2B 92.222 90 6 1 1 89 583162331 583162242 6.090000e-25 126.0
125 TraesCS6B01G437500 chr5A 95.489 133 4 2 2318 2448 46616314 46616182 1.630000e-50 211.0
126 TraesCS6B01G437500 chr5A 91.150 113 9 1 2208 2319 440097277 440097165 1.000000e-32 152.0
127 TraesCS6B01G437500 chr5A 90.909 110 8 2 2210 2319 440219233 440219126 4.670000e-31 147.0
128 TraesCS6B01G437500 chr5A 89.623 106 8 3 2440 2544 104498210 104498313 1.310000e-26 132.0
129 TraesCS6B01G437500 chr5A 86.885 122 11 5 2440 2559 361251174 361251056 1.310000e-26 132.0
130 TraesCS6B01G437500 chr5A 86.992 123 9 6 2440 2559 440097168 440097050 1.310000e-26 132.0
131 TraesCS6B01G437500 chr5A 84.848 132 14 5 2193 2319 344027908 344028038 1.690000e-25 128.0
132 TraesCS6B01G437500 chr4B 93.985 133 7 1 2318 2449 11989325 11989193 3.540000e-47 200.0
133 TraesCS6B01G437500 chr4B 94.531 128 6 1 2317 2443 452847590 452847717 4.580000e-46 196.0
134 TraesCS6B01G437500 chr4B 88.024 167 15 5 2281 2443 483947708 483947543 5.920000e-45 193.0
135 TraesCS6B01G437500 chr4B 81.452 124 9 4 2209 2319 349149024 349148902 7.990000e-14 89.8
136 TraesCS6B01G437500 chr5D 93.333 135 8 1 2313 2446 55850475 55850609 1.270000e-46 198.0
137 TraesCS6B01G437500 chr5D 93.182 132 7 2 2317 2446 452850679 452850810 5.920000e-45 193.0
138 TraesCS6B01G437500 chr5D 87.805 123 8 7 2440 2559 209432826 209432944 2.810000e-28 137.0
139 TraesCS6B01G437500 chr5D 86.992 123 9 7 2440 2559 209425712 209425830 1.310000e-26 132.0
140 TraesCS6B01G437500 chr5D 86.066 122 12 5 2440 2559 209439928 209440046 6.090000e-25 126.0
141 TraesCS6B01G437500 chr5D 82.787 122 17 3 1 120 435795983 435795864 7.930000e-19 106.0
142 TraesCS6B01G437500 chr3D 92.143 140 10 1 2314 2452 67064915 67064776 4.580000e-46 196.0
143 TraesCS6B01G437500 chr3D 100.000 74 0 0 5080 5153 27264188 27264261 2.810000e-28 137.0
144 TraesCS6B01G437500 chr2D 92.143 140 7 4 2318 2455 445188594 445188731 1.650000e-45 195.0
145 TraesCS6B01G437500 chr2D 86.207 116 10 5 2208 2319 491396615 491396502 2.830000e-23 121.0
146 TraesCS6B01G437500 chr2D 85.345 116 11 5 2208 2319 491402625 491402512 1.320000e-21 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G437500 chr6B 704437577 704443364 5787 False 10689.000000 10689 100.000000 1 5788 1 chr6B.!!$F5 5787
1 TraesCS6B01G437500 chr6B 18428440 18429078 638 False 1114.000000 1114 98.122000 5150 5788 1 chr6B.!!$F1 638
2 TraesCS6B01G437500 chr6B 704177101 704177940 839 True 686.000000 686 81.464000 1251 2094 1 chr6B.!!$R2 843
3 TraesCS6B01G437500 chr6B 704183020 704183883 863 True 651.000000 651 80.390000 1251 2116 1 chr6B.!!$R3 865
4 TraesCS6B01G437500 chr6B 704371539 704373255 1716 False 484.333333 774 85.059000 477 2116 3 chr6B.!!$F6 1639
5 TraesCS6B01G437500 chr2A 12506098 12508502 2404 True 3539.000000 3539 93.239000 2674 5079 1 chr2A.!!$R1 2405
6 TraesCS6B01G437500 chr2A 235437449 235439870 2421 True 3314.000000 3314 91.458000 2665 5079 1 chr2A.!!$R2 2414
7 TraesCS6B01G437500 chr2A 235452817 235455237 2420 True 3286.000000 3286 91.249000 2665 5080 1 chr2A.!!$R3 2415
8 TraesCS6B01G437500 chr2A 366172530 366173714 1184 True 682.000000 682 77.868000 2506 3690 1 chr2A.!!$R4 1184
9 TraesCS6B01G437500 chr3B 380730599 380733004 2405 True 3507.000000 3507 92.966000 2668 5079 1 chr3B.!!$R1 2411
10 TraesCS6B01G437500 chr3B 152901300 152901938 638 False 1120.000000 1120 98.279000 5150 5788 1 chr3B.!!$F1 638
11 TraesCS6B01G437500 chr7D 442114335 442116766 2431 True 3432.000000 3432 92.150000 2645 5080 1 chr7D.!!$R2 2435
12 TraesCS6B01G437500 chr7D 442098656 442101071 2415 True 3354.000000 3354 91.749000 2668 5083 1 chr7D.!!$R1 2415
13 TraesCS6B01G437500 chr1B 431183408 431185835 2427 False 3334.000000 3334 91.445000 2645 5080 1 chr1B.!!$F2 2435
14 TraesCS6B01G437500 chr1B 431174993 431177427 2434 False 3302.000000 3302 91.146000 2638 5080 1 chr1B.!!$F1 2442
15 TraesCS6B01G437500 chr7A 231995667 231998094 2427 True 3275.000000 3275 91.050000 2649 5080 1 chr7A.!!$R1 2431
16 TraesCS6B01G437500 chr7A 223545956 223548782 2826 True 1796.500000 3258 92.479500 2113 5079 2 chr7A.!!$R4 2966
17 TraesCS6B01G437500 chr7A 669077287 669077925 638 True 1114.000000 1114 98.122000 5150 5788 1 chr7A.!!$R2 638
18 TraesCS6B01G437500 chr6A 609002478 609004235 1757 False 2577.000000 2577 93.397000 382 2116 1 chr6A.!!$F3 1734
19 TraesCS6B01G437500 chr6A 608977600 608979312 1712 False 483.666667 774 85.354667 481 2116 3 chr6A.!!$F6 1635
20 TraesCS6B01G437500 chr6A 608967003 608968537 1534 False 438.500000 566 81.816000 401 1930 2 chr6A.!!$F5 1529
21 TraesCS6B01G437500 chr5B 65770987 65772477 1490 False 2390.000000 2390 95.783000 642 2116 1 chr5B.!!$F1 1474
22 TraesCS6B01G437500 chr5B 665907903 665908541 638 False 1114.000000 1114 98.122000 5150 5788 1 chr5B.!!$F6 638
23 TraesCS6B01G437500 chr7B 147110647 147112081 1434 True 1168.000000 1168 81.898000 2440 3883 1 chr7B.!!$R2 1443
24 TraesCS6B01G437500 chr7B 733031916 733032554 638 True 1120.000000 1120 98.279000 5150 5788 1 chr7B.!!$R5 638
25 TraesCS6B01G437500 chr7B 739437424 739438062 638 False 1114.000000 1114 98.122000 5150 5788 1 chr7B.!!$F2 638
26 TraesCS6B01G437500 chr4A 686540770 686541408 638 True 1125.000000 1125 98.435000 5150 5788 1 chr4A.!!$R3 638
27 TraesCS6B01G437500 chr4A 661350399 661351037 638 False 1114.000000 1114 98.122000 5150 5788 1 chr4A.!!$F2 638
28 TraesCS6B01G437500 chrUn 15363960 15364598 638 False 1114.000000 1114 98.122000 5150 5788 1 chrUn.!!$F1 638
29 TraesCS6B01G437500 chr6D 425041960 425042740 780 True 558.000000 558 80.175000 2504 3281 1 chr6D.!!$R7 777
30 TraesCS6B01G437500 chr6D 425050266 425051047 781 True 555.000000 555 80.075000 2504 3281 1 chr6D.!!$R8 777
31 TraesCS6B01G437500 chr6D 106347052 106347844 792 False 381.000000 381 76.348000 2504 3281 1 chr6D.!!$F2 777
32 TraesCS6B01G437500 chr6D 106363696 106364489 793 False 377.000000 377 76.255000 2504 3281 1 chr6D.!!$F3 777
33 TraesCS6B01G437500 chr4D 89311 90114 803 False 499.000000 499 78.806000 2501 3281 1 chr4D.!!$F1 780
34 TraesCS6B01G437500 chr1D 165223243 165223916 673 True 409.000000 409 78.571000 2509 3158 1 chr1D.!!$R2 649

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
135 136 0.035317 TCCTTGATGCTTGCACTCGT 59.965 50.0 0.00 0.0 0.00 4.18 F
166 167 0.242825 GATCGTTCACACTCCCGTCA 59.757 55.0 0.00 0.0 0.00 4.35 F
167 168 0.243907 ATCGTTCACACTCCCGTCAG 59.756 55.0 0.00 0.0 0.00 3.51 F
214 215 0.252696 TGTAGACCTGATGTGGGGCT 60.253 55.0 0.00 0.0 45.46 5.19 F
632 655 0.252742 ATCTCCTCCCCGGACTTGTT 60.253 55.0 0.73 0.0 36.69 2.83 F
1245 1448 0.390340 TGCTGACTTAGAAGCTGGCG 60.390 55.0 11.49 0.0 40.21 5.69 F
2438 2646 0.104304 CAAGTATTCCGGACGGAGGG 59.896 60.0 13.64 0.0 46.06 4.30 F
3104 3396 0.179018 CCCCCTTTGATCATCCCGAC 60.179 60.0 0.00 0.0 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1245 1448 1.271102 CTCGCTTAGCCTGTCCCTATC 59.729 57.143 0.00 0.00 0.00 2.08 R
1953 2156 2.683211 AGCTCAGGGACAAAACCAAT 57.317 45.000 0.00 0.00 0.00 3.16 R
2170 2378 2.282674 CACACAGCCATGGCCAGT 60.283 61.111 33.14 27.46 43.17 4.00 R
2182 2390 3.285982 CACACATGGGCGCACACA 61.286 61.111 18.24 8.04 0.00 3.72 R
2420 2628 0.032813 TCCCTCCGTCCGGAATACTT 60.033 55.000 5.23 0.00 44.66 2.24 R
2752 3004 0.455633 CCGGATTCGTCTCGTCGTTT 60.456 55.000 0.00 0.00 33.95 3.60 R
4213 4535 0.250124 CAACTTACCCACCACGCTCA 60.250 55.000 0.00 0.00 0.00 4.26 R
5107 5442 0.321564 TTGTTGCTCACCCTCCGATG 60.322 55.000 0.00 0.00 0.00 3.84 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.351276 ATTGTGACGGGCAGGACC 59.649 61.111 0.00 0.00 37.93 4.46
43 44 2.842320 GGTCTCTGCCGAGTTTTCC 58.158 57.895 4.97 1.37 38.45 3.13
44 45 1.014564 GGTCTCTGCCGAGTTTTCCG 61.015 60.000 4.97 0.00 38.45 4.30
51 52 3.132863 CCGAGTTTTCCGGTGTAGG 57.867 57.895 0.00 0.00 41.91 3.18
52 53 1.017701 CCGAGTTTTCCGGTGTAGGC 61.018 60.000 0.00 0.00 41.91 3.93
53 54 0.037605 CGAGTTTTCCGGTGTAGGCT 60.038 55.000 0.00 0.00 0.00 4.58
54 55 1.607251 CGAGTTTTCCGGTGTAGGCTT 60.607 52.381 0.00 0.00 0.00 4.35
55 56 2.074576 GAGTTTTCCGGTGTAGGCTTC 58.925 52.381 0.00 0.00 0.00 3.86
56 57 1.697982 AGTTTTCCGGTGTAGGCTTCT 59.302 47.619 0.00 0.00 0.00 2.85
57 58 2.105993 AGTTTTCCGGTGTAGGCTTCTT 59.894 45.455 0.00 0.00 0.00 2.52
58 59 2.467566 TTTCCGGTGTAGGCTTCTTC 57.532 50.000 0.00 0.00 0.00 2.87
59 60 1.640917 TTCCGGTGTAGGCTTCTTCT 58.359 50.000 0.00 0.00 0.00 2.85
60 61 1.640917 TCCGGTGTAGGCTTCTTCTT 58.359 50.000 0.00 0.00 0.00 2.52
61 62 1.549170 TCCGGTGTAGGCTTCTTCTTC 59.451 52.381 0.00 0.00 0.00 2.87
62 63 1.550976 CCGGTGTAGGCTTCTTCTTCT 59.449 52.381 0.00 0.00 0.00 2.85
63 64 2.028020 CCGGTGTAGGCTTCTTCTTCTT 60.028 50.000 0.00 0.00 0.00 2.52
64 65 3.557264 CCGGTGTAGGCTTCTTCTTCTTT 60.557 47.826 0.00 0.00 0.00 2.52
65 66 3.433615 CGGTGTAGGCTTCTTCTTCTTTG 59.566 47.826 0.00 0.00 0.00 2.77
66 67 3.753797 GGTGTAGGCTTCTTCTTCTTTGG 59.246 47.826 0.00 0.00 0.00 3.28
67 68 4.390264 GTGTAGGCTTCTTCTTCTTTGGT 58.610 43.478 0.00 0.00 0.00 3.67
68 69 4.822350 GTGTAGGCTTCTTCTTCTTTGGTT 59.178 41.667 0.00 0.00 0.00 3.67
69 70 5.049336 GTGTAGGCTTCTTCTTCTTTGGTTC 60.049 44.000 0.00 0.00 0.00 3.62
70 71 4.170468 AGGCTTCTTCTTCTTTGGTTCA 57.830 40.909 0.00 0.00 0.00 3.18
71 72 3.885901 AGGCTTCTTCTTCTTTGGTTCAC 59.114 43.478 0.00 0.00 0.00 3.18
72 73 3.304057 GGCTTCTTCTTCTTTGGTTCACG 60.304 47.826 0.00 0.00 0.00 4.35
73 74 3.560068 GCTTCTTCTTCTTTGGTTCACGA 59.440 43.478 0.00 0.00 0.00 4.35
74 75 4.319118 GCTTCTTCTTCTTTGGTTCACGAG 60.319 45.833 0.00 0.00 0.00 4.18
75 76 3.131396 TCTTCTTCTTTGGTTCACGAGC 58.869 45.455 0.00 0.00 0.00 5.03
76 77 2.613026 TCTTCTTTGGTTCACGAGCA 57.387 45.000 0.00 0.00 0.00 4.26
77 78 2.912771 TCTTCTTTGGTTCACGAGCAA 58.087 42.857 0.00 0.00 43.54 3.91
84 85 3.829886 TGGTTCACGAGCAAAATCATC 57.170 42.857 0.00 0.00 31.67 2.92
85 86 2.487762 TGGTTCACGAGCAAAATCATCC 59.512 45.455 0.00 0.00 31.67 3.51
86 87 2.159379 GGTTCACGAGCAAAATCATCCC 60.159 50.000 0.00 0.00 0.00 3.85
87 88 1.750193 TCACGAGCAAAATCATCCCC 58.250 50.000 0.00 0.00 0.00 4.81
88 89 1.281867 TCACGAGCAAAATCATCCCCT 59.718 47.619 0.00 0.00 0.00 4.79
89 90 2.094675 CACGAGCAAAATCATCCCCTT 58.905 47.619 0.00 0.00 0.00 3.95
90 91 2.098117 CACGAGCAAAATCATCCCCTTC 59.902 50.000 0.00 0.00 0.00 3.46
91 92 2.025887 ACGAGCAAAATCATCCCCTTCT 60.026 45.455 0.00 0.00 0.00 2.85
92 93 3.199946 ACGAGCAAAATCATCCCCTTCTA 59.800 43.478 0.00 0.00 0.00 2.10
93 94 3.561725 CGAGCAAAATCATCCCCTTCTAC 59.438 47.826 0.00 0.00 0.00 2.59
94 95 4.684485 CGAGCAAAATCATCCCCTTCTACT 60.684 45.833 0.00 0.00 0.00 2.57
95 96 5.196695 GAGCAAAATCATCCCCTTCTACTT 58.803 41.667 0.00 0.00 0.00 2.24
96 97 5.196695 AGCAAAATCATCCCCTTCTACTTC 58.803 41.667 0.00 0.00 0.00 3.01
97 98 4.949856 GCAAAATCATCCCCTTCTACTTCA 59.050 41.667 0.00 0.00 0.00 3.02
98 99 5.595952 GCAAAATCATCCCCTTCTACTTCAT 59.404 40.000 0.00 0.00 0.00 2.57
99 100 6.097412 GCAAAATCATCCCCTTCTACTTCATT 59.903 38.462 0.00 0.00 0.00 2.57
100 101 7.285401 GCAAAATCATCCCCTTCTACTTCATTA 59.715 37.037 0.00 0.00 0.00 1.90
101 102 8.624776 CAAAATCATCCCCTTCTACTTCATTAC 58.375 37.037 0.00 0.00 0.00 1.89
102 103 7.698163 AATCATCCCCTTCTACTTCATTACT 57.302 36.000 0.00 0.00 0.00 2.24
103 104 6.485830 TCATCCCCTTCTACTTCATTACTG 57.514 41.667 0.00 0.00 0.00 2.74
104 105 5.366768 TCATCCCCTTCTACTTCATTACTGG 59.633 44.000 0.00 0.00 0.00 4.00
105 106 3.454812 TCCCCTTCTACTTCATTACTGGC 59.545 47.826 0.00 0.00 0.00 4.85
106 107 3.456277 CCCCTTCTACTTCATTACTGGCT 59.544 47.826 0.00 0.00 0.00 4.75
107 108 4.446371 CCCTTCTACTTCATTACTGGCTG 58.554 47.826 0.00 0.00 0.00 4.85
108 109 4.162320 CCCTTCTACTTCATTACTGGCTGA 59.838 45.833 0.00 0.00 0.00 4.26
109 110 5.355596 CCTTCTACTTCATTACTGGCTGAG 58.644 45.833 0.00 0.00 0.00 3.35
110 111 5.344743 TTCTACTTCATTACTGGCTGAGG 57.655 43.478 0.00 0.00 0.00 3.86
111 112 4.353777 TCTACTTCATTACTGGCTGAGGT 58.646 43.478 0.00 0.00 36.00 3.85
112 113 4.777896 TCTACTTCATTACTGGCTGAGGTT 59.222 41.667 0.00 0.00 34.13 3.50
113 114 3.679389 ACTTCATTACTGGCTGAGGTTG 58.321 45.455 0.00 0.00 28.39 3.77
114 115 2.787473 TCATTACTGGCTGAGGTTGG 57.213 50.000 0.00 0.00 0.00 3.77
115 116 1.281867 TCATTACTGGCTGAGGTTGGG 59.718 52.381 0.00 0.00 0.00 4.12
116 117 1.004745 CATTACTGGCTGAGGTTGGGT 59.995 52.381 0.00 0.00 0.00 4.51
117 118 0.690762 TTACTGGCTGAGGTTGGGTC 59.309 55.000 0.00 0.00 0.00 4.46
118 119 1.198759 TACTGGCTGAGGTTGGGTCC 61.199 60.000 0.00 0.00 0.00 4.46
119 120 2.121963 TGGCTGAGGTTGGGTCCT 60.122 61.111 0.00 0.00 40.97 3.85
120 121 1.774217 TGGCTGAGGTTGGGTCCTT 60.774 57.895 0.00 0.00 38.02 3.36
121 122 1.303643 GGCTGAGGTTGGGTCCTTG 60.304 63.158 0.00 0.00 38.02 3.61
122 123 1.761174 GCTGAGGTTGGGTCCTTGA 59.239 57.895 0.00 0.00 38.02 3.02
123 124 0.329596 GCTGAGGTTGGGTCCTTGAT 59.670 55.000 0.00 0.00 38.02 2.57
124 125 1.952367 GCTGAGGTTGGGTCCTTGATG 60.952 57.143 0.00 0.00 38.02 3.07
125 126 0.038166 TGAGGTTGGGTCCTTGATGC 59.962 55.000 0.00 0.00 38.02 3.91
126 127 0.329596 GAGGTTGGGTCCTTGATGCT 59.670 55.000 0.00 0.00 38.02 3.79
127 128 0.779997 AGGTTGGGTCCTTGATGCTT 59.220 50.000 0.00 0.00 33.52 3.91
128 129 0.890683 GGTTGGGTCCTTGATGCTTG 59.109 55.000 0.00 0.00 0.00 4.01
129 130 0.244721 GTTGGGTCCTTGATGCTTGC 59.755 55.000 0.00 0.00 0.00 4.01
130 131 0.178967 TTGGGTCCTTGATGCTTGCA 60.179 50.000 0.00 0.00 0.00 4.08
131 132 0.895100 TGGGTCCTTGATGCTTGCAC 60.895 55.000 0.00 0.00 0.00 4.57
132 133 0.610232 GGGTCCTTGATGCTTGCACT 60.610 55.000 0.00 0.00 0.00 4.40
133 134 0.807496 GGTCCTTGATGCTTGCACTC 59.193 55.000 0.00 0.00 0.00 3.51
134 135 0.445436 GTCCTTGATGCTTGCACTCG 59.555 55.000 0.00 0.00 0.00 4.18
135 136 0.035317 TCCTTGATGCTTGCACTCGT 59.965 50.000 0.00 0.00 0.00 4.18
136 137 1.275010 TCCTTGATGCTTGCACTCGTA 59.725 47.619 0.00 0.00 0.00 3.43
137 138 2.093500 TCCTTGATGCTTGCACTCGTAT 60.093 45.455 0.00 0.00 0.00 3.06
138 139 2.679837 CCTTGATGCTTGCACTCGTATT 59.320 45.455 0.00 0.00 0.00 1.89
139 140 3.242543 CCTTGATGCTTGCACTCGTATTC 60.243 47.826 0.00 0.00 0.00 1.75
140 141 2.279741 TGATGCTTGCACTCGTATTCC 58.720 47.619 0.00 0.00 0.00 3.01
141 142 1.599542 GATGCTTGCACTCGTATTCCC 59.400 52.381 0.00 0.00 0.00 3.97
142 143 0.323302 TGCTTGCACTCGTATTCCCA 59.677 50.000 0.00 0.00 0.00 4.37
143 144 1.271108 TGCTTGCACTCGTATTCCCAA 60.271 47.619 0.00 0.00 0.00 4.12
144 145 2.017049 GCTTGCACTCGTATTCCCAAT 58.983 47.619 0.00 0.00 0.00 3.16
145 146 3.202906 GCTTGCACTCGTATTCCCAATA 58.797 45.455 0.00 0.00 0.00 1.90
146 147 3.248602 GCTTGCACTCGTATTCCCAATAG 59.751 47.826 0.00 0.00 0.00 1.73
147 148 3.469008 TGCACTCGTATTCCCAATAGG 57.531 47.619 0.00 0.00 0.00 2.57
148 149 3.035363 TGCACTCGTATTCCCAATAGGA 58.965 45.455 0.00 0.22 45.68 2.94
149 150 3.646162 TGCACTCGTATTCCCAATAGGAT 59.354 43.478 0.00 0.00 46.94 3.24
150 151 4.246458 GCACTCGTATTCCCAATAGGATC 58.754 47.826 0.44 0.00 46.94 3.36
151 152 4.486090 CACTCGTATTCCCAATAGGATCG 58.514 47.826 0.44 0.00 46.94 3.69
152 153 4.022242 CACTCGTATTCCCAATAGGATCGT 60.022 45.833 0.00 0.00 46.94 3.73
153 154 4.587684 ACTCGTATTCCCAATAGGATCGTT 59.412 41.667 0.00 0.00 46.94 3.85
154 155 5.130292 TCGTATTCCCAATAGGATCGTTC 57.870 43.478 0.00 0.00 46.94 3.95
155 156 4.585581 TCGTATTCCCAATAGGATCGTTCA 59.414 41.667 0.00 0.00 46.94 3.18
156 157 4.684703 CGTATTCCCAATAGGATCGTTCAC 59.315 45.833 0.00 0.00 46.94 3.18
157 158 4.771114 ATTCCCAATAGGATCGTTCACA 57.229 40.909 0.00 0.00 46.94 3.58
158 159 3.536956 TCCCAATAGGATCGTTCACAC 57.463 47.619 0.00 0.00 40.93 3.82
159 160 3.104512 TCCCAATAGGATCGTTCACACT 58.895 45.455 0.00 0.00 40.93 3.55
160 161 3.132289 TCCCAATAGGATCGTTCACACTC 59.868 47.826 0.00 0.00 40.93 3.51
161 162 3.458189 CCAATAGGATCGTTCACACTCC 58.542 50.000 0.00 0.00 36.89 3.85
162 163 3.458189 CAATAGGATCGTTCACACTCCC 58.542 50.000 0.00 0.00 0.00 4.30
163 164 1.100510 TAGGATCGTTCACACTCCCG 58.899 55.000 0.00 0.00 0.00 5.14
164 165 0.898789 AGGATCGTTCACACTCCCGT 60.899 55.000 0.00 0.00 0.00 5.28
165 166 0.458025 GGATCGTTCACACTCCCGTC 60.458 60.000 0.00 0.00 0.00 4.79
166 167 0.242825 GATCGTTCACACTCCCGTCA 59.757 55.000 0.00 0.00 0.00 4.35
167 168 0.243907 ATCGTTCACACTCCCGTCAG 59.756 55.000 0.00 0.00 0.00 3.51
168 169 1.105167 TCGTTCACACTCCCGTCAGT 61.105 55.000 0.00 0.00 0.00 3.41
170 171 0.387929 GTTCACACTCCCGTCAGTGA 59.612 55.000 15.85 4.11 45.92 3.41
171 172 0.673985 TTCACACTCCCGTCAGTGAG 59.326 55.000 15.85 9.35 45.92 3.51
172 173 1.373497 CACACTCCCGTCAGTGAGC 60.373 63.158 15.85 0.00 45.92 4.26
173 174 1.832608 ACACTCCCGTCAGTGAGCA 60.833 57.895 15.85 0.00 45.92 4.26
174 175 1.080230 CACTCCCGTCAGTGAGCAG 60.080 63.158 5.26 0.00 45.92 4.24
175 176 2.125753 CTCCCGTCAGTGAGCAGC 60.126 66.667 0.00 0.00 0.00 5.25
176 177 2.917227 TCCCGTCAGTGAGCAGCA 60.917 61.111 0.00 0.00 0.00 4.41
177 178 2.433838 CCCGTCAGTGAGCAGCAG 60.434 66.667 0.00 0.00 0.00 4.24
178 179 2.653115 CCGTCAGTGAGCAGCAGA 59.347 61.111 0.00 0.00 0.00 4.26
179 180 1.445754 CCGTCAGTGAGCAGCAGAG 60.446 63.158 0.00 0.00 0.00 3.35
180 181 1.288439 CGTCAGTGAGCAGCAGAGT 59.712 57.895 0.00 0.00 0.00 3.24
181 182 0.319383 CGTCAGTGAGCAGCAGAGTT 60.319 55.000 0.00 0.00 0.00 3.01
182 183 1.871408 CGTCAGTGAGCAGCAGAGTTT 60.871 52.381 0.00 0.00 0.00 2.66
183 184 2.216898 GTCAGTGAGCAGCAGAGTTTT 58.783 47.619 0.00 0.00 0.00 2.43
184 185 3.393800 GTCAGTGAGCAGCAGAGTTTTA 58.606 45.455 0.00 0.00 0.00 1.52
185 186 3.431572 GTCAGTGAGCAGCAGAGTTTTAG 59.568 47.826 0.00 0.00 0.00 1.85
186 187 2.159234 CAGTGAGCAGCAGAGTTTTAGC 59.841 50.000 0.00 0.00 0.00 3.09
187 188 2.038295 AGTGAGCAGCAGAGTTTTAGCT 59.962 45.455 0.00 0.00 39.63 3.32
188 189 3.259374 AGTGAGCAGCAGAGTTTTAGCTA 59.741 43.478 0.00 0.00 36.73 3.32
189 190 3.369451 GTGAGCAGCAGAGTTTTAGCTAC 59.631 47.826 0.00 0.00 36.73 3.58
190 191 3.259374 TGAGCAGCAGAGTTTTAGCTACT 59.741 43.478 0.00 0.00 36.73 2.57
191 192 3.594134 AGCAGCAGAGTTTTAGCTACTG 58.406 45.455 0.00 0.00 36.73 2.74
192 193 2.675348 GCAGCAGAGTTTTAGCTACTGG 59.325 50.000 9.58 0.00 36.73 4.00
193 194 3.866449 GCAGCAGAGTTTTAGCTACTGGT 60.866 47.826 7.07 7.07 39.35 4.00
194 195 4.319177 CAGCAGAGTTTTAGCTACTGGTT 58.681 43.478 9.55 0.00 37.24 3.67
195 196 4.757149 CAGCAGAGTTTTAGCTACTGGTTT 59.243 41.667 9.55 0.00 37.24 3.27
196 197 4.757149 AGCAGAGTTTTAGCTACTGGTTTG 59.243 41.667 7.07 0.00 36.73 2.93
197 198 4.515567 GCAGAGTTTTAGCTACTGGTTTGT 59.484 41.667 9.58 0.00 0.00 2.83
198 199 5.699458 GCAGAGTTTTAGCTACTGGTTTGTA 59.301 40.000 9.58 0.00 0.00 2.41
199 200 6.128526 GCAGAGTTTTAGCTACTGGTTTGTAG 60.129 42.308 9.58 0.00 41.91 2.74
200 201 7.152645 CAGAGTTTTAGCTACTGGTTTGTAGA 58.847 38.462 0.00 0.00 41.63 2.59
201 202 7.116519 CAGAGTTTTAGCTACTGGTTTGTAGAC 59.883 40.741 0.00 0.00 41.63 2.59
202 203 6.228995 AGTTTTAGCTACTGGTTTGTAGACC 58.771 40.000 0.00 0.00 41.63 3.85
203 204 6.042897 AGTTTTAGCTACTGGTTTGTAGACCT 59.957 38.462 0.00 0.00 41.63 3.85
204 205 3.963428 AGCTACTGGTTTGTAGACCTG 57.037 47.619 5.94 0.00 41.63 4.00
205 206 3.507411 AGCTACTGGTTTGTAGACCTGA 58.493 45.455 7.76 0.00 41.63 3.86
206 207 4.097418 AGCTACTGGTTTGTAGACCTGAT 58.903 43.478 7.76 0.00 41.63 2.90
207 208 4.081420 AGCTACTGGTTTGTAGACCTGATG 60.081 45.833 7.76 2.26 41.63 3.07
208 209 4.322801 GCTACTGGTTTGTAGACCTGATGT 60.323 45.833 7.76 0.00 41.63 3.06
209 210 4.008074 ACTGGTTTGTAGACCTGATGTG 57.992 45.455 7.76 0.00 40.06 3.21
210 211 3.244561 ACTGGTTTGTAGACCTGATGTGG 60.245 47.826 7.76 0.00 40.06 4.17
211 212 2.039746 TGGTTTGTAGACCTGATGTGGG 59.960 50.000 0.00 0.00 40.47 4.61
212 213 2.618045 GGTTTGTAGACCTGATGTGGGG 60.618 54.545 0.00 0.00 36.73 4.96
213 214 0.618458 TTGTAGACCTGATGTGGGGC 59.382 55.000 0.00 0.00 0.00 5.80
214 215 0.252696 TGTAGACCTGATGTGGGGCT 60.253 55.000 0.00 0.00 45.46 5.19
215 216 0.912486 GTAGACCTGATGTGGGGCTT 59.088 55.000 0.00 0.00 39.59 4.35
216 217 1.134371 GTAGACCTGATGTGGGGCTTC 60.134 57.143 0.00 0.00 39.59 3.86
217 218 0.548682 AGACCTGATGTGGGGCTTCT 60.549 55.000 0.00 0.00 39.59 2.85
218 219 0.329596 GACCTGATGTGGGGCTTCTT 59.670 55.000 0.00 0.00 0.00 2.52
219 220 0.779997 ACCTGATGTGGGGCTTCTTT 59.220 50.000 0.00 0.00 0.00 2.52
220 221 1.180029 CCTGATGTGGGGCTTCTTTG 58.820 55.000 0.00 0.00 0.00 2.77
221 222 0.529378 CTGATGTGGGGCTTCTTTGC 59.471 55.000 0.00 0.00 0.00 3.68
222 223 1.243342 TGATGTGGGGCTTCTTTGCG 61.243 55.000 0.00 0.00 0.00 4.85
223 224 2.548127 GATGTGGGGCTTCTTTGCGC 62.548 60.000 0.00 0.00 43.82 6.09
224 225 2.985847 GTGGGGCTTCTTTGCGCT 60.986 61.111 9.73 0.00 43.97 5.92
225 226 2.203480 TGGGGCTTCTTTGCGCTT 60.203 55.556 9.73 0.00 43.97 4.68
226 227 1.832167 TGGGGCTTCTTTGCGCTTT 60.832 52.632 9.73 0.00 43.97 3.51
227 228 1.373371 GGGGCTTCTTTGCGCTTTG 60.373 57.895 9.73 0.00 43.97 2.77
228 229 1.373371 GGGCTTCTTTGCGCTTTGG 60.373 57.895 9.73 0.00 41.74 3.28
229 230 2.023771 GGCTTCTTTGCGCTTTGGC 61.024 57.895 9.73 5.54 0.00 4.52
230 231 1.006922 GCTTCTTTGCGCTTTGGCT 60.007 52.632 9.73 0.00 36.09 4.75
231 232 1.280206 GCTTCTTTGCGCTTTGGCTG 61.280 55.000 9.73 0.00 36.09 4.85
232 233 1.280206 CTTCTTTGCGCTTTGGCTGC 61.280 55.000 9.73 0.00 38.04 5.25
233 234 1.737355 TTCTTTGCGCTTTGGCTGCT 61.737 50.000 9.73 0.00 38.25 4.24
234 235 2.019951 CTTTGCGCTTTGGCTGCTG 61.020 57.895 9.73 0.00 38.25 4.41
235 236 4.651008 TTGCGCTTTGGCTGCTGC 62.651 61.111 9.73 7.10 38.25 5.25
237 238 4.353437 GCGCTTTGGCTGCTGCTT 62.353 61.111 15.64 0.00 39.59 3.91
238 239 2.430244 CGCTTTGGCTGCTGCTTG 60.430 61.111 15.64 4.72 39.59 4.01
239 240 2.737376 GCTTTGGCTGCTGCTTGC 60.737 61.111 15.64 10.42 43.25 4.01
240 241 3.048602 CTTTGGCTGCTGCTTGCT 58.951 55.556 15.64 0.00 43.37 3.91
241 242 1.080705 CTTTGGCTGCTGCTTGCTC 60.081 57.895 15.64 0.00 43.37 4.26
242 243 1.524863 CTTTGGCTGCTGCTTGCTCT 61.525 55.000 15.64 0.00 43.37 4.09
243 244 1.111116 TTTGGCTGCTGCTTGCTCTT 61.111 50.000 15.64 0.00 43.37 2.85
244 245 1.521450 TTGGCTGCTGCTTGCTCTTC 61.521 55.000 15.64 0.00 43.37 2.87
245 246 1.674980 GGCTGCTGCTTGCTCTTCT 60.675 57.895 15.64 0.00 43.37 2.85
246 247 1.242665 GGCTGCTGCTTGCTCTTCTT 61.243 55.000 15.64 0.00 43.37 2.52
247 248 1.446907 GCTGCTGCTTGCTCTTCTTA 58.553 50.000 8.53 0.00 43.37 2.10
248 249 1.397692 GCTGCTGCTTGCTCTTCTTAG 59.602 52.381 8.53 0.00 43.37 2.18
249 250 2.008329 CTGCTGCTTGCTCTTCTTAGG 58.992 52.381 0.00 0.00 43.37 2.69
250 251 1.625315 TGCTGCTTGCTCTTCTTAGGA 59.375 47.619 0.00 0.00 43.37 2.94
251 252 2.278854 GCTGCTTGCTCTTCTTAGGAG 58.721 52.381 0.00 0.00 38.95 3.69
252 253 2.093764 GCTGCTTGCTCTTCTTAGGAGA 60.094 50.000 0.00 0.00 38.95 3.71
253 254 3.618507 GCTGCTTGCTCTTCTTAGGAGAA 60.619 47.826 0.00 0.00 37.88 2.87
266 267 7.706100 TTCTTAGGAGAAGTAACTTCCTCTC 57.294 40.000 4.43 0.34 40.98 3.20
267 268 6.189133 TCTTAGGAGAAGTAACTTCCTCTCC 58.811 44.000 8.61 8.61 40.98 3.71
268 269 4.405756 AGGAGAAGTAACTTCCTCTCCA 57.594 45.455 16.99 0.00 40.98 3.86
269 270 4.349365 AGGAGAAGTAACTTCCTCTCCAG 58.651 47.826 16.99 0.00 40.98 3.86
270 271 3.449377 GGAGAAGTAACTTCCTCTCCAGG 59.551 52.174 11.26 0.00 40.98 4.45
271 272 4.090819 GAGAAGTAACTTCCTCTCCAGGT 58.909 47.826 0.00 0.00 40.98 4.00
272 273 4.494591 AGAAGTAACTTCCTCTCCAGGTT 58.505 43.478 0.00 0.00 40.98 3.50
273 274 4.528987 AGAAGTAACTTCCTCTCCAGGTTC 59.471 45.833 0.00 0.00 40.98 3.62
274 275 3.174779 AGTAACTTCCTCTCCAGGTTCC 58.825 50.000 0.00 0.00 41.28 3.62
275 276 2.424684 AACTTCCTCTCCAGGTTCCT 57.575 50.000 0.00 0.00 41.28 3.36
276 277 2.424684 ACTTCCTCTCCAGGTTCCTT 57.575 50.000 0.00 0.00 41.28 3.36
277 278 3.562108 ACTTCCTCTCCAGGTTCCTTA 57.438 47.619 0.00 0.00 41.28 2.69
278 279 4.081695 ACTTCCTCTCCAGGTTCCTTAT 57.918 45.455 0.00 0.00 41.28 1.73
279 280 4.439860 ACTTCCTCTCCAGGTTCCTTATT 58.560 43.478 0.00 0.00 41.28 1.40
280 281 5.600749 ACTTCCTCTCCAGGTTCCTTATTA 58.399 41.667 0.00 0.00 41.28 0.98
281 282 5.663556 ACTTCCTCTCCAGGTTCCTTATTAG 59.336 44.000 0.00 0.00 41.28 1.73
282 283 5.222278 TCCTCTCCAGGTTCCTTATTAGT 57.778 43.478 0.00 0.00 41.28 2.24
283 284 6.351317 TCCTCTCCAGGTTCCTTATTAGTA 57.649 41.667 0.00 0.00 41.28 1.82
284 285 6.134754 TCCTCTCCAGGTTCCTTATTAGTAC 58.865 44.000 0.00 0.00 41.28 2.73
285 286 6.068379 TCCTCTCCAGGTTCCTTATTAGTACT 60.068 42.308 0.00 0.00 41.28 2.73
286 287 6.265876 CCTCTCCAGGTTCCTTATTAGTACTC 59.734 46.154 0.00 0.00 34.60 2.59
287 288 5.826737 TCTCCAGGTTCCTTATTAGTACTCG 59.173 44.000 0.00 0.00 0.00 4.18
288 289 5.759059 TCCAGGTTCCTTATTAGTACTCGA 58.241 41.667 0.00 0.00 0.00 4.04
289 290 6.189859 TCCAGGTTCCTTATTAGTACTCGAA 58.810 40.000 0.00 0.00 0.00 3.71
290 291 6.837568 TCCAGGTTCCTTATTAGTACTCGAAT 59.162 38.462 0.00 0.00 0.00 3.34
291 292 7.343833 TCCAGGTTCCTTATTAGTACTCGAATT 59.656 37.037 0.00 0.00 0.00 2.17
292 293 7.652507 CCAGGTTCCTTATTAGTACTCGAATTC 59.347 40.741 0.00 0.00 0.00 2.17
293 294 7.652507 CAGGTTCCTTATTAGTACTCGAATTCC 59.347 40.741 0.00 0.00 0.00 3.01
294 295 7.564292 AGGTTCCTTATTAGTACTCGAATTCCT 59.436 37.037 0.00 0.00 0.00 3.36
295 296 8.854117 GGTTCCTTATTAGTACTCGAATTCCTA 58.146 37.037 0.00 0.00 0.00 2.94
296 297 9.896263 GTTCCTTATTAGTACTCGAATTCCTAG 57.104 37.037 0.00 0.39 0.00 3.02
297 298 9.638176 TTCCTTATTAGTACTCGAATTCCTAGT 57.362 33.333 0.00 11.63 0.00 2.57
298 299 9.064706 TCCTTATTAGTACTCGAATTCCTAGTG 57.935 37.037 15.18 0.34 0.00 2.74
299 300 8.298140 CCTTATTAGTACTCGAATTCCTAGTGG 58.702 40.741 15.18 4.88 0.00 4.00
300 301 8.757982 TTATTAGTACTCGAATTCCTAGTGGT 57.242 34.615 15.18 7.26 34.23 4.16
301 302 7.657023 ATTAGTACTCGAATTCCTAGTGGTT 57.343 36.000 15.18 6.18 34.23 3.67
302 303 5.326200 AGTACTCGAATTCCTAGTGGTTG 57.674 43.478 15.18 0.00 34.23 3.77
303 304 3.611766 ACTCGAATTCCTAGTGGTTGG 57.388 47.619 7.19 0.00 34.23 3.77
304 305 2.904434 ACTCGAATTCCTAGTGGTTGGT 59.096 45.455 7.19 0.00 34.23 3.67
305 306 4.091549 ACTCGAATTCCTAGTGGTTGGTA 58.908 43.478 7.19 0.00 34.23 3.25
306 307 4.715297 ACTCGAATTCCTAGTGGTTGGTAT 59.285 41.667 7.19 0.00 34.23 2.73
307 308 5.018539 TCGAATTCCTAGTGGTTGGTATG 57.981 43.478 0.00 0.00 34.23 2.39
308 309 4.127171 CGAATTCCTAGTGGTTGGTATGG 58.873 47.826 0.00 0.00 34.23 2.74
309 310 4.383770 CGAATTCCTAGTGGTTGGTATGGT 60.384 45.833 0.00 0.00 34.23 3.55
310 311 4.772886 ATTCCTAGTGGTTGGTATGGTC 57.227 45.455 0.00 0.00 34.23 4.02
311 312 3.484953 TCCTAGTGGTTGGTATGGTCT 57.515 47.619 0.00 0.00 34.23 3.85
312 313 3.104512 TCCTAGTGGTTGGTATGGTCTG 58.895 50.000 0.00 0.00 34.23 3.51
313 314 3.104512 CCTAGTGGTTGGTATGGTCTGA 58.895 50.000 0.00 0.00 0.00 3.27
314 315 3.133003 CCTAGTGGTTGGTATGGTCTGAG 59.867 52.174 0.00 0.00 0.00 3.35
315 316 2.621070 AGTGGTTGGTATGGTCTGAGT 58.379 47.619 0.00 0.00 0.00 3.41
316 317 2.567615 AGTGGTTGGTATGGTCTGAGTC 59.432 50.000 0.00 0.00 0.00 3.36
317 318 2.567615 GTGGTTGGTATGGTCTGAGTCT 59.432 50.000 0.00 0.00 0.00 3.24
318 319 3.008049 GTGGTTGGTATGGTCTGAGTCTT 59.992 47.826 0.00 0.00 0.00 3.01
319 320 3.650942 TGGTTGGTATGGTCTGAGTCTTT 59.349 43.478 0.00 0.00 0.00 2.52
320 321 4.003648 GGTTGGTATGGTCTGAGTCTTTG 58.996 47.826 0.00 0.00 0.00 2.77
321 322 3.981071 TGGTATGGTCTGAGTCTTTGG 57.019 47.619 0.00 0.00 0.00 3.28
322 323 3.248024 TGGTATGGTCTGAGTCTTTGGT 58.752 45.455 0.00 0.00 0.00 3.67
323 324 3.650942 TGGTATGGTCTGAGTCTTTGGTT 59.349 43.478 0.00 0.00 0.00 3.67
324 325 4.254492 GGTATGGTCTGAGTCTTTGGTTC 58.746 47.826 0.00 0.00 0.00 3.62
325 326 2.930826 TGGTCTGAGTCTTTGGTTCC 57.069 50.000 0.00 0.00 0.00 3.62
326 327 1.420138 TGGTCTGAGTCTTTGGTTCCC 59.580 52.381 0.00 0.00 0.00 3.97
327 328 1.700186 GGTCTGAGTCTTTGGTTCCCT 59.300 52.381 0.00 0.00 0.00 4.20
328 329 2.551071 GGTCTGAGTCTTTGGTTCCCTG 60.551 54.545 0.00 0.00 0.00 4.45
329 330 1.699634 TCTGAGTCTTTGGTTCCCTGG 59.300 52.381 0.00 0.00 0.00 4.45
330 331 1.421646 CTGAGTCTTTGGTTCCCTGGT 59.578 52.381 0.00 0.00 0.00 4.00
331 332 1.142870 TGAGTCTTTGGTTCCCTGGTG 59.857 52.381 0.00 0.00 0.00 4.17
332 333 0.478507 AGTCTTTGGTTCCCTGGTGG 59.521 55.000 0.00 0.00 0.00 4.61
333 334 0.476771 GTCTTTGGTTCCCTGGTGGA 59.523 55.000 0.00 0.00 43.18 4.02
341 342 1.002624 TCCCTGGTGGAATTGTCGC 60.003 57.895 0.00 0.00 41.40 5.19
342 343 1.002134 CCCTGGTGGAATTGTCGCT 60.002 57.895 0.00 0.00 35.39 4.93
343 344 1.308069 CCCTGGTGGAATTGTCGCTG 61.308 60.000 0.00 0.00 35.39 5.18
344 345 1.308069 CCTGGTGGAATTGTCGCTGG 61.308 60.000 0.00 0.00 34.57 4.85
345 346 1.926511 CTGGTGGAATTGTCGCTGGC 61.927 60.000 0.00 0.00 0.00 4.85
346 347 2.700773 GGTGGAATTGTCGCTGGCC 61.701 63.158 0.00 0.00 0.00 5.36
347 348 1.675641 GTGGAATTGTCGCTGGCCT 60.676 57.895 3.32 0.00 0.00 5.19
348 349 1.675310 TGGAATTGTCGCTGGCCTG 60.675 57.895 3.32 4.26 0.00 4.85
349 350 2.486966 GAATTGTCGCTGGCCTGC 59.513 61.111 23.78 23.78 0.00 4.85
350 351 2.034687 AATTGTCGCTGGCCTGCT 59.965 55.556 29.18 10.10 0.00 4.24
351 352 2.262471 GAATTGTCGCTGGCCTGCTG 62.262 60.000 29.18 22.26 0.00 4.41
357 358 2.675772 GCTGGCCTGCTGCTTCTT 60.676 61.111 25.99 0.00 40.92 2.52
358 359 2.273912 GCTGGCCTGCTGCTTCTTT 61.274 57.895 25.99 0.00 40.92 2.52
359 360 1.585006 CTGGCCTGCTGCTTCTTTG 59.415 57.895 3.32 0.00 40.92 2.77
360 361 2.260743 GGCCTGCTGCTTCTTTGC 59.739 61.111 0.00 0.00 40.92 3.68
361 362 2.567497 GGCCTGCTGCTTCTTTGCA 61.567 57.895 0.00 0.00 40.92 4.08
362 363 1.590147 GCCTGCTGCTTCTTTGCAT 59.410 52.632 0.00 0.00 42.48 3.96
363 364 0.813184 GCCTGCTGCTTCTTTGCATA 59.187 50.000 0.00 0.00 42.48 3.14
364 365 1.202268 GCCTGCTGCTTCTTTGCATAG 60.202 52.381 0.00 0.00 42.48 2.23
365 366 2.362736 CCTGCTGCTTCTTTGCATAGA 58.637 47.619 2.39 2.39 42.48 1.98
366 367 2.950309 CCTGCTGCTTCTTTGCATAGAT 59.050 45.455 7.73 0.00 42.48 1.98
367 368 3.243101 CCTGCTGCTTCTTTGCATAGATG 60.243 47.826 7.73 11.06 42.48 2.90
368 369 3.613030 TGCTGCTTCTTTGCATAGATGA 58.387 40.909 19.65 2.08 42.48 2.92
369 370 3.376234 TGCTGCTTCTTTGCATAGATGAC 59.624 43.478 19.65 12.82 42.48 3.06
370 371 3.545624 GCTGCTTCTTTGCATAGATGACG 60.546 47.826 19.65 11.91 42.48 4.35
371 372 2.352651 TGCTTCTTTGCATAGATGACGC 59.647 45.455 19.65 14.22 38.12 5.19
372 373 2.286654 GCTTCTTTGCATAGATGACGCC 60.287 50.000 19.65 3.08 0.00 5.68
373 374 1.953559 TCTTTGCATAGATGACGCCC 58.046 50.000 2.39 0.00 0.00 6.13
374 375 1.486310 TCTTTGCATAGATGACGCCCT 59.514 47.619 2.39 0.00 0.00 5.19
375 376 1.869767 CTTTGCATAGATGACGCCCTC 59.130 52.381 0.00 0.00 0.00 4.30
376 377 0.829990 TTGCATAGATGACGCCCTCA 59.170 50.000 0.00 0.00 0.00 3.86
377 378 0.390492 TGCATAGATGACGCCCTCAG 59.610 55.000 0.00 0.00 30.20 3.35
378 379 0.320247 GCATAGATGACGCCCTCAGG 60.320 60.000 0.00 0.00 30.20 3.86
379 380 1.332195 CATAGATGACGCCCTCAGGA 58.668 55.000 0.00 0.00 33.47 3.86
380 381 1.271934 CATAGATGACGCCCTCAGGAG 59.728 57.143 0.00 0.00 39.23 3.69
447 453 2.224917 TGGAAAATCTTTAGTGGGCCGT 60.225 45.455 0.00 0.00 0.00 5.68
535 544 2.644798 AGCCCGAGCCCAATCTTAATAT 59.355 45.455 0.00 0.00 41.25 1.28
537 546 2.749621 CCCGAGCCCAATCTTAATATGC 59.250 50.000 0.00 0.00 0.00 3.14
562 580 5.012893 AGGAGAGATATGCATACATCGTCA 58.987 41.667 8.99 0.00 37.74 4.35
569 587 1.970640 TGCATACATCGTCAGCCCTAT 59.029 47.619 0.00 0.00 0.00 2.57
632 655 0.252742 ATCTCCTCCCCGGACTTGTT 60.253 55.000 0.73 0.00 36.69 2.83
652 686 1.573857 TCCCTACTCCAGATGCTACCA 59.426 52.381 0.00 0.00 0.00 3.25
746 782 3.003480 GTTCTGTCTTCGGATTCCAAGG 58.997 50.000 3.09 0.00 0.00 3.61
803 839 8.409358 AAAGGAGTTGTTTTTATATGTCTGCT 57.591 30.769 0.00 0.00 0.00 4.24
848 907 0.648958 CGGTTTACGATTCGGAAGCC 59.351 55.000 22.85 22.85 45.43 4.35
849 908 1.738030 CGGTTTACGATTCGGAAGCCT 60.738 52.381 27.55 3.00 46.43 4.58
850 909 1.931841 GGTTTACGATTCGGAAGCCTC 59.068 52.381 24.74 4.38 45.43 4.70
851 910 2.613691 GTTTACGATTCGGAAGCCTCA 58.386 47.619 11.29 0.00 28.94 3.86
852 911 2.579207 TTACGATTCGGAAGCCTCAG 57.421 50.000 11.29 0.00 0.00 3.35
896 958 4.996788 TTGGGTAGTATCGGACTTCTTC 57.003 45.455 0.00 0.00 39.81 2.87
935 999 4.162509 AGGAGTCTATAACAAGTTCAGGCC 59.837 45.833 0.00 0.00 0.00 5.19
1048 1153 3.491639 CCGACGTGATGTAAGTTGTTTCA 59.508 43.478 0.00 0.00 0.00 2.69
1245 1448 0.390340 TGCTGACTTAGAAGCTGGCG 60.390 55.000 11.49 0.00 40.21 5.69
1953 2156 0.991146 TGCTGAACATCCCTTGGCTA 59.009 50.000 0.00 0.00 0.00 3.93
2182 2390 2.038329 ATGCAACTGGCCATGGCT 59.962 55.556 34.70 14.32 43.89 4.75
2206 2414 2.745884 GCCCATGTGTGCAGCGTA 60.746 61.111 0.00 0.00 0.00 4.42
2219 2427 0.576798 CAGCGTAGTGTGTGTGTGTG 59.423 55.000 0.00 0.00 0.00 3.82
2220 2428 1.151777 AGCGTAGTGTGTGTGTGTGC 61.152 55.000 0.00 0.00 0.00 4.57
2323 2531 9.598517 TTAGTGCTAAGTTAGTCTAGTACTCTC 57.401 37.037 11.51 0.00 39.80 3.20
2324 2532 7.854337 AGTGCTAAGTTAGTCTAGTACTCTCT 58.146 38.462 11.51 0.00 39.80 3.10
2325 2533 7.983484 AGTGCTAAGTTAGTCTAGTACTCTCTC 59.017 40.741 11.51 0.00 39.80 3.20
2326 2534 7.225341 GTGCTAAGTTAGTCTAGTACTCTCTCC 59.775 44.444 11.51 0.00 39.80 3.71
2327 2535 6.421801 GCTAAGTTAGTCTAGTACTCTCTCCG 59.578 46.154 11.51 0.00 39.80 4.63
2328 2536 5.937975 AGTTAGTCTAGTACTCTCTCCGT 57.062 43.478 0.00 0.00 39.80 4.69
2329 2537 5.906073 AGTTAGTCTAGTACTCTCTCCGTC 58.094 45.833 0.00 0.00 39.80 4.79
2330 2538 3.825143 AGTCTAGTACTCTCTCCGTCC 57.175 52.381 0.00 0.00 30.33 4.79
2331 2539 3.106054 AGTCTAGTACTCTCTCCGTCCA 58.894 50.000 0.00 0.00 30.33 4.02
2332 2540 3.518705 AGTCTAGTACTCTCTCCGTCCAA 59.481 47.826 0.00 0.00 30.33 3.53
2333 2541 4.019501 AGTCTAGTACTCTCTCCGTCCAAA 60.020 45.833 0.00 0.00 30.33 3.28
2334 2542 4.699257 GTCTAGTACTCTCTCCGTCCAAAA 59.301 45.833 0.00 0.00 0.00 2.44
2335 2543 5.182760 GTCTAGTACTCTCTCCGTCCAAAAA 59.817 44.000 0.00 0.00 0.00 1.94
2336 2544 5.950549 TCTAGTACTCTCTCCGTCCAAAAAT 59.049 40.000 0.00 0.00 0.00 1.82
2337 2545 7.066766 GTCTAGTACTCTCTCCGTCCAAAAATA 59.933 40.741 0.00 0.00 0.00 1.40
2338 2546 5.963594 AGTACTCTCTCCGTCCAAAAATAC 58.036 41.667 0.00 0.00 0.00 1.89
2339 2547 5.715753 AGTACTCTCTCCGTCCAAAAATACT 59.284 40.000 0.00 0.00 0.00 2.12
2340 2548 5.485209 ACTCTCTCCGTCCAAAAATACTT 57.515 39.130 0.00 0.00 0.00 2.24
2341 2549 5.238583 ACTCTCTCCGTCCAAAAATACTTG 58.761 41.667 0.00 0.00 0.00 3.16
2342 2550 5.221661 ACTCTCTCCGTCCAAAAATACTTGT 60.222 40.000 0.00 0.00 0.00 3.16
2343 2551 5.235516 TCTCTCCGTCCAAAAATACTTGTC 58.764 41.667 0.00 0.00 0.00 3.18
2344 2552 4.963373 TCTCCGTCCAAAAATACTTGTCA 58.037 39.130 0.00 0.00 0.00 3.58
2345 2553 5.556915 TCTCCGTCCAAAAATACTTGTCAT 58.443 37.500 0.00 0.00 0.00 3.06
2346 2554 5.642063 TCTCCGTCCAAAAATACTTGTCATC 59.358 40.000 0.00 0.00 0.00 2.92
2347 2555 4.390603 TCCGTCCAAAAATACTTGTCATCG 59.609 41.667 0.00 0.00 0.00 3.84
2348 2556 4.390603 CCGTCCAAAAATACTTGTCATCGA 59.609 41.667 0.00 0.00 0.00 3.59
2349 2557 5.106869 CCGTCCAAAAATACTTGTCATCGAA 60.107 40.000 0.00 0.00 0.00 3.71
2350 2558 6.367421 CGTCCAAAAATACTTGTCATCGAAA 58.633 36.000 0.00 0.00 0.00 3.46
2351 2559 7.021196 CGTCCAAAAATACTTGTCATCGAAAT 58.979 34.615 0.00 0.00 0.00 2.17
2352 2560 7.007367 CGTCCAAAAATACTTGTCATCGAAATG 59.993 37.037 0.00 0.00 0.00 2.32
2353 2561 7.273381 GTCCAAAAATACTTGTCATCGAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
2354 2562 7.175816 TCCAAAAATACTTGTCATCGAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
2355 2563 7.273381 CCAAAAATACTTGTCATCGAAATGGAC 59.727 37.037 0.00 0.00 33.42 4.02
2356 2564 7.447374 AAAATACTTGTCATCGAAATGGACA 57.553 32.000 8.05 8.05 33.42 4.02
2357 2565 7.447374 AAATACTTGTCATCGAAATGGACAA 57.553 32.000 18.13 18.13 34.59 3.18
2358 2566 7.447374 AATACTTGTCATCGAAATGGACAAA 57.553 32.000 19.07 10.75 34.98 2.83
2359 2567 5.766150 ACTTGTCATCGAAATGGACAAAA 57.234 34.783 19.07 5.83 34.98 2.44
2360 2568 6.142818 ACTTGTCATCGAAATGGACAAAAA 57.857 33.333 19.07 5.33 34.98 1.94
2361 2569 6.208644 ACTTGTCATCGAAATGGACAAAAAG 58.791 36.000 19.07 13.33 34.98 2.27
2362 2570 5.119931 TGTCATCGAAATGGACAAAAAGG 57.880 39.130 9.28 0.00 33.42 3.11
2363 2571 4.824537 TGTCATCGAAATGGACAAAAAGGA 59.175 37.500 9.28 0.00 33.42 3.36
2364 2572 5.300539 TGTCATCGAAATGGACAAAAAGGAA 59.699 36.000 9.28 0.00 33.42 3.36
2365 2573 6.015519 TGTCATCGAAATGGACAAAAAGGAAT 60.016 34.615 9.28 0.00 33.42 3.01
2366 2574 6.308766 GTCATCGAAATGGACAAAAAGGAATG 59.691 38.462 0.00 0.00 33.42 2.67
2367 2575 5.782893 TCGAAATGGACAAAAAGGAATGT 57.217 34.783 0.00 0.00 0.00 2.71
2368 2576 6.885952 TCGAAATGGACAAAAAGGAATGTA 57.114 33.333 0.00 0.00 0.00 2.29
2369 2577 7.461182 TCGAAATGGACAAAAAGGAATGTAT 57.539 32.000 0.00 0.00 0.00 2.29
2370 2578 7.535139 TCGAAATGGACAAAAAGGAATGTATC 58.465 34.615 0.00 0.00 0.00 2.24
2371 2579 7.393234 TCGAAATGGACAAAAAGGAATGTATCT 59.607 33.333 0.00 0.00 0.00 1.98
2372 2580 8.673711 CGAAATGGACAAAAAGGAATGTATCTA 58.326 33.333 0.00 0.00 0.00 1.98
2374 2582 9.753674 AAATGGACAAAAAGGAATGTATCTAGA 57.246 29.630 0.00 0.00 0.00 2.43
2375 2583 9.753674 AATGGACAAAAAGGAATGTATCTAGAA 57.246 29.630 0.00 0.00 0.00 2.10
2376 2584 8.561738 TGGACAAAAAGGAATGTATCTAGAAC 57.438 34.615 0.00 0.00 0.00 3.01
2377 2585 8.383175 TGGACAAAAAGGAATGTATCTAGAACT 58.617 33.333 0.00 0.00 0.00 3.01
2378 2586 9.886132 GGACAAAAAGGAATGTATCTAGAACTA 57.114 33.333 0.00 0.00 0.00 2.24
2409 2617 9.607333 ACATCTAGATACATCTCCTTTTATCCA 57.393 33.333 4.54 0.00 38.32 3.41
2418 2626 8.827832 ACATCTCCTTTTATCCATTTTGATGA 57.172 30.769 0.00 0.00 33.85 2.92
2419 2627 8.689972 ACATCTCCTTTTATCCATTTTGATGAC 58.310 33.333 0.00 0.00 33.85 3.06
2420 2628 8.689061 CATCTCCTTTTATCCATTTTGATGACA 58.311 33.333 0.00 0.00 32.05 3.58
2421 2629 8.648698 TCTCCTTTTATCCATTTTGATGACAA 57.351 30.769 0.00 0.00 0.00 3.18
2422 2630 8.742777 TCTCCTTTTATCCATTTTGATGACAAG 58.257 33.333 0.00 0.00 37.32 3.16
2423 2631 8.421249 TCCTTTTATCCATTTTGATGACAAGT 57.579 30.769 0.00 0.00 37.32 3.16
2424 2632 9.527157 TCCTTTTATCCATTTTGATGACAAGTA 57.473 29.630 0.00 0.00 37.32 2.24
2429 2637 6.435430 TCCATTTTGATGACAAGTATTCCG 57.565 37.500 0.00 0.00 37.32 4.30
2430 2638 5.356751 TCCATTTTGATGACAAGTATTCCGG 59.643 40.000 0.00 0.00 37.32 5.14
2431 2639 5.356751 CCATTTTGATGACAAGTATTCCGGA 59.643 40.000 0.00 0.00 37.32 5.14
2432 2640 5.873179 TTTTGATGACAAGTATTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
2433 2641 3.159353 TGATGACAAGTATTCCGGACG 57.841 47.619 1.83 0.00 0.00 4.79
2434 2642 2.159156 TGATGACAAGTATTCCGGACGG 60.159 50.000 1.83 3.96 0.00 4.79
2435 2643 1.548081 TGACAAGTATTCCGGACGGA 58.452 50.000 1.83 9.76 43.52 4.69
2436 2644 1.475280 TGACAAGTATTCCGGACGGAG 59.525 52.381 13.64 3.86 46.06 4.63
2437 2645 0.822164 ACAAGTATTCCGGACGGAGG 59.178 55.000 13.64 0.00 46.06 4.30
2438 2646 0.104304 CAAGTATTCCGGACGGAGGG 59.896 60.000 13.64 0.00 46.06 4.30
2620 2870 0.467384 CCACTATGGCTAGCTGCAGT 59.533 55.000 16.64 11.72 45.15 4.40
3001 3282 1.306226 CCCCCTCTTCTCTCCGGTT 60.306 63.158 0.00 0.00 0.00 4.44
3104 3396 0.179018 CCCCCTTTGATCATCCCGAC 60.179 60.000 0.00 0.00 0.00 4.79
3168 3471 8.748412 TGCTATTGTTATTGTTTGCTCCTATTT 58.252 29.630 0.00 0.00 0.00 1.40
3347 3661 2.616330 CGGCACCGCACATCACTTT 61.616 57.895 0.00 0.00 0.00 2.66
3348 3662 1.295357 CGGCACCGCACATCACTTTA 61.295 55.000 0.00 0.00 0.00 1.85
3414 3728 3.764434 GGTGAGACCTCTACATCACTTCA 59.236 47.826 4.39 0.00 41.40 3.02
3457 3771 0.528924 ATTCGGTCGTGGTCATCGAA 59.471 50.000 0.00 0.00 42.63 3.71
3592 3908 4.191015 GGGGGTGATTCCTCGGGC 62.191 72.222 0.00 0.00 37.63 6.13
3617 3933 3.081804 CCCCTTGATGTTTAGACACACC 58.918 50.000 0.00 0.00 38.91 4.16
3816 4135 2.282887 GGGCAACGGGGTCACATT 60.283 61.111 0.00 0.00 37.60 2.71
4025 4347 1.925959 AGCTCCTGCCTTTTTAGGGAT 59.074 47.619 0.00 0.00 40.80 3.85
4026 4348 3.123273 AGCTCCTGCCTTTTTAGGGATA 58.877 45.455 0.00 0.00 40.80 2.59
4213 4535 0.600057 GTGTCCGACCGGAGTTAAGT 59.400 55.000 9.46 0.00 46.16 2.24
4343 4665 7.192852 AGAACTGGATACTTGTGATGAGAAT 57.807 36.000 0.00 0.00 37.61 2.40
4345 4667 8.105829 AGAACTGGATACTTGTGATGAGAATTT 58.894 33.333 0.00 0.00 37.61 1.82
4360 4682 6.748333 TGAGAATTTGATGGTGATGAGAAC 57.252 37.500 0.00 0.00 0.00 3.01
4366 4688 4.146745 TGATGGTGATGAGAACTGGATG 57.853 45.455 0.00 0.00 0.00 3.51
4373 4695 3.118149 TGATGAGAACTGGATGGTGATGG 60.118 47.826 0.00 0.00 0.00 3.51
4399 4721 4.045974 ACTGGATAGTATGGCTCTGGGATA 59.954 45.833 0.00 0.00 34.74 2.59
4471 4796 9.866798 AACACTACTACTACTTTACTTTATGCC 57.133 33.333 0.00 0.00 0.00 4.40
4488 4813 1.860240 TGCCACTCTACTCCCTCCTAT 59.140 52.381 0.00 0.00 0.00 2.57
4583 4913 2.039480 CTGCAGCCCAGTCCACATATAT 59.961 50.000 0.00 0.00 36.79 0.86
4672 5006 1.979155 GGTTGCTTTGCTCCCCCTC 60.979 63.158 0.00 0.00 0.00 4.30
4734 5068 2.285969 AGCCCAGGAGCCAGATGT 60.286 61.111 0.00 0.00 0.00 3.06
4914 5248 3.678056 TCCGCTGACTCTTGTGTATTT 57.322 42.857 0.00 0.00 0.00 1.40
5009 5344 5.013079 AGAGTTGTGTTGTGATATCTTCCCA 59.987 40.000 3.98 0.00 0.00 4.37
5080 5415 0.669318 TGAATCGAGGGCGTCACAAC 60.669 55.000 8.06 0.00 38.98 3.32
5091 5426 3.031660 GTCACAACGATCGTCCCTC 57.968 57.895 22.98 7.83 0.00 4.30
5092 5427 0.526662 GTCACAACGATCGTCCCTCT 59.473 55.000 22.98 1.66 0.00 3.69
5093 5428 0.809385 TCACAACGATCGTCCCTCTC 59.191 55.000 22.98 0.00 0.00 3.20
5094 5429 0.179134 CACAACGATCGTCCCTCTCC 60.179 60.000 22.98 0.00 0.00 3.71
5095 5430 0.323542 ACAACGATCGTCCCTCTCCT 60.324 55.000 22.98 0.00 0.00 3.69
5096 5431 0.818296 CAACGATCGTCCCTCTCCTT 59.182 55.000 22.98 0.00 0.00 3.36
5097 5432 1.204941 CAACGATCGTCCCTCTCCTTT 59.795 52.381 22.98 0.00 0.00 3.11
5098 5433 0.818296 ACGATCGTCCCTCTCCTTTG 59.182 55.000 16.60 0.00 0.00 2.77
5099 5434 1.103803 CGATCGTCCCTCTCCTTTGA 58.896 55.000 7.03 0.00 0.00 2.69
5100 5435 1.683917 CGATCGTCCCTCTCCTTTGAT 59.316 52.381 7.03 0.00 0.00 2.57
5101 5436 2.287909 CGATCGTCCCTCTCCTTTGATC 60.288 54.545 7.03 0.00 0.00 2.92
5102 5437 1.103803 TCGTCCCTCTCCTTTGATCG 58.896 55.000 0.00 0.00 0.00 3.69
5103 5438 1.103803 CGTCCCTCTCCTTTGATCGA 58.896 55.000 0.00 0.00 0.00 3.59
5104 5439 1.202313 CGTCCCTCTCCTTTGATCGAC 60.202 57.143 0.00 0.00 0.00 4.20
5105 5440 2.104170 GTCCCTCTCCTTTGATCGACT 58.896 52.381 0.00 0.00 0.00 4.18
5106 5441 3.288964 GTCCCTCTCCTTTGATCGACTA 58.711 50.000 0.00 0.00 0.00 2.59
5107 5442 3.067040 GTCCCTCTCCTTTGATCGACTAC 59.933 52.174 0.00 0.00 0.00 2.73
5108 5443 3.024547 CCCTCTCCTTTGATCGACTACA 58.975 50.000 0.00 0.00 0.00 2.74
5109 5444 3.639094 CCCTCTCCTTTGATCGACTACAT 59.361 47.826 0.00 0.00 0.00 2.29
5110 5445 4.261825 CCCTCTCCTTTGATCGACTACATC 60.262 50.000 0.00 0.00 0.00 3.06
5121 5456 0.386113 GACTACATCGGAGGGTGAGC 59.614 60.000 0.00 0.00 0.00 4.26
5122 5457 0.324368 ACTACATCGGAGGGTGAGCA 60.324 55.000 0.00 0.00 0.00 4.26
5123 5458 0.824109 CTACATCGGAGGGTGAGCAA 59.176 55.000 0.00 0.00 0.00 3.91
5124 5459 0.535335 TACATCGGAGGGTGAGCAAC 59.465 55.000 0.00 0.00 0.00 4.17
5125 5460 1.296392 CATCGGAGGGTGAGCAACA 59.704 57.895 0.00 0.00 0.00 3.33
5126 5461 0.321564 CATCGGAGGGTGAGCAACAA 60.322 55.000 0.00 0.00 0.00 2.83
5127 5462 0.620556 ATCGGAGGGTGAGCAACAAT 59.379 50.000 0.00 0.00 0.00 2.71
5128 5463 0.400213 TCGGAGGGTGAGCAACAATT 59.600 50.000 0.00 0.00 0.00 2.32
5129 5464 0.804989 CGGAGGGTGAGCAACAATTC 59.195 55.000 0.00 0.00 0.00 2.17
5130 5465 1.177401 GGAGGGTGAGCAACAATTCC 58.823 55.000 0.00 0.00 0.00 3.01
5131 5466 1.547675 GGAGGGTGAGCAACAATTCCA 60.548 52.381 0.00 0.00 0.00 3.53
5132 5467 2.450476 GAGGGTGAGCAACAATTCCAT 58.550 47.619 0.00 0.00 0.00 3.41
5133 5468 2.165030 GAGGGTGAGCAACAATTCCATG 59.835 50.000 0.00 0.00 0.00 3.66
5134 5469 2.170166 GGGTGAGCAACAATTCCATGA 58.830 47.619 0.00 0.00 0.00 3.07
5135 5470 2.094545 GGGTGAGCAACAATTCCATGAC 60.095 50.000 0.00 0.00 0.00 3.06
5136 5471 2.094545 GGTGAGCAACAATTCCATGACC 60.095 50.000 0.00 0.00 0.00 4.02
5137 5472 2.821969 GTGAGCAACAATTCCATGACCT 59.178 45.455 0.00 0.00 0.00 3.85
5138 5473 3.084039 TGAGCAACAATTCCATGACCTC 58.916 45.455 0.00 0.00 0.00 3.85
5139 5474 2.086869 AGCAACAATTCCATGACCTCG 58.913 47.619 0.00 0.00 0.00 4.63
5140 5475 1.812571 GCAACAATTCCATGACCTCGT 59.187 47.619 0.00 0.00 0.00 4.18
5141 5476 2.159517 GCAACAATTCCATGACCTCGTC 60.160 50.000 0.00 0.00 0.00 4.20
5142 5477 2.403252 ACAATTCCATGACCTCGTCC 57.597 50.000 0.00 0.00 0.00 4.79
5143 5478 1.628340 ACAATTCCATGACCTCGTCCA 59.372 47.619 0.00 0.00 0.00 4.02
5144 5479 2.009774 CAATTCCATGACCTCGTCCAC 58.990 52.381 0.00 0.00 0.00 4.02
5145 5480 1.573108 ATTCCATGACCTCGTCCACT 58.427 50.000 0.00 0.00 0.00 4.00
5146 5481 1.348064 TTCCATGACCTCGTCCACTT 58.652 50.000 0.00 0.00 0.00 3.16
5147 5482 1.348064 TCCATGACCTCGTCCACTTT 58.652 50.000 0.00 0.00 0.00 2.66
5148 5483 1.697432 TCCATGACCTCGTCCACTTTT 59.303 47.619 0.00 0.00 0.00 2.27
5172 5507 2.917227 CCACAAGTTGGGCCCACC 60.917 66.667 28.70 20.42 42.54 4.61
5263 5598 6.039829 AGTTCCCTTTTGAATCACTTGTCTTC 59.960 38.462 0.00 0.00 0.00 2.87
5734 6069 3.040965 CATCAATGCCCGGGCTAAT 57.959 52.632 43.34 28.62 42.51 1.73
5749 6084 1.062148 GCTAATCGTGGAAAAGACGGC 59.938 52.381 0.00 0.00 37.43 5.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 0.037605 AGCCTACACCGGAAAACTCG 60.038 55.000 9.46 0.00 0.00 4.18
35 36 2.074576 GAAGCCTACACCGGAAAACTC 58.925 52.381 9.46 0.00 0.00 3.01
36 37 1.697982 AGAAGCCTACACCGGAAAACT 59.302 47.619 9.46 0.00 0.00 2.66
37 38 2.180432 AGAAGCCTACACCGGAAAAC 57.820 50.000 9.46 0.00 0.00 2.43
38 39 2.370849 AGAAGAAGCCTACACCGGAAAA 59.629 45.455 9.46 0.00 0.00 2.29
39 40 1.975680 AGAAGAAGCCTACACCGGAAA 59.024 47.619 9.46 0.00 0.00 3.13
40 41 1.640917 AGAAGAAGCCTACACCGGAA 58.359 50.000 9.46 0.00 0.00 4.30
41 42 1.549170 GAAGAAGAAGCCTACACCGGA 59.451 52.381 9.46 0.00 0.00 5.14
42 43 1.550976 AGAAGAAGAAGCCTACACCGG 59.449 52.381 0.00 0.00 0.00 5.28
43 44 3.320673 AAGAAGAAGAAGCCTACACCG 57.679 47.619 0.00 0.00 0.00 4.94
44 45 3.753797 CCAAAGAAGAAGAAGCCTACACC 59.246 47.826 0.00 0.00 0.00 4.16
45 46 4.390264 ACCAAAGAAGAAGAAGCCTACAC 58.610 43.478 0.00 0.00 0.00 2.90
46 47 4.706842 ACCAAAGAAGAAGAAGCCTACA 57.293 40.909 0.00 0.00 0.00 2.74
47 48 5.049336 GTGAACCAAAGAAGAAGAAGCCTAC 60.049 44.000 0.00 0.00 0.00 3.18
48 49 5.063880 GTGAACCAAAGAAGAAGAAGCCTA 58.936 41.667 0.00 0.00 0.00 3.93
49 50 3.885901 GTGAACCAAAGAAGAAGAAGCCT 59.114 43.478 0.00 0.00 0.00 4.58
50 51 3.304057 CGTGAACCAAAGAAGAAGAAGCC 60.304 47.826 0.00 0.00 0.00 4.35
51 52 3.560068 TCGTGAACCAAAGAAGAAGAAGC 59.440 43.478 0.00 0.00 0.00 3.86
52 53 4.319118 GCTCGTGAACCAAAGAAGAAGAAG 60.319 45.833 0.00 0.00 0.00 2.85
53 54 3.560068 GCTCGTGAACCAAAGAAGAAGAA 59.440 43.478 0.00 0.00 0.00 2.52
54 55 3.131396 GCTCGTGAACCAAAGAAGAAGA 58.869 45.455 0.00 0.00 0.00 2.87
55 56 2.872245 TGCTCGTGAACCAAAGAAGAAG 59.128 45.455 0.00 0.00 0.00 2.85
56 57 2.912771 TGCTCGTGAACCAAAGAAGAA 58.087 42.857 0.00 0.00 0.00 2.52
57 58 2.613026 TGCTCGTGAACCAAAGAAGA 57.387 45.000 0.00 0.00 0.00 2.87
58 59 3.691049 TTTGCTCGTGAACCAAAGAAG 57.309 42.857 0.00 0.00 0.00 2.85
59 60 4.097135 TGATTTTGCTCGTGAACCAAAGAA 59.903 37.500 0.00 0.00 31.03 2.52
60 61 3.629855 TGATTTTGCTCGTGAACCAAAGA 59.370 39.130 0.00 0.00 31.03 2.52
61 62 3.963665 TGATTTTGCTCGTGAACCAAAG 58.036 40.909 0.00 0.00 31.03 2.77
62 63 4.545610 GATGATTTTGCTCGTGAACCAAA 58.454 39.130 0.00 0.00 0.00 3.28
63 64 3.057596 GGATGATTTTGCTCGTGAACCAA 60.058 43.478 0.00 0.00 0.00 3.67
64 65 2.487762 GGATGATTTTGCTCGTGAACCA 59.512 45.455 0.00 0.00 0.00 3.67
65 66 2.159379 GGGATGATTTTGCTCGTGAACC 60.159 50.000 0.00 0.00 0.00 3.62
66 67 2.159379 GGGGATGATTTTGCTCGTGAAC 60.159 50.000 0.00 0.00 0.00 3.18
67 68 2.091541 GGGGATGATTTTGCTCGTGAA 58.908 47.619 0.00 0.00 0.00 3.18
68 69 1.281867 AGGGGATGATTTTGCTCGTGA 59.718 47.619 0.00 0.00 0.00 4.35
69 70 1.755179 AGGGGATGATTTTGCTCGTG 58.245 50.000 0.00 0.00 0.00 4.35
70 71 2.025887 AGAAGGGGATGATTTTGCTCGT 60.026 45.455 0.00 0.00 0.00 4.18
71 72 2.648059 AGAAGGGGATGATTTTGCTCG 58.352 47.619 0.00 0.00 0.00 5.03
72 73 4.786425 AGTAGAAGGGGATGATTTTGCTC 58.214 43.478 0.00 0.00 0.00 4.26
73 74 4.870021 AGTAGAAGGGGATGATTTTGCT 57.130 40.909 0.00 0.00 0.00 3.91
74 75 4.949856 TGAAGTAGAAGGGGATGATTTTGC 59.050 41.667 0.00 0.00 0.00 3.68
75 76 7.651027 AATGAAGTAGAAGGGGATGATTTTG 57.349 36.000 0.00 0.00 0.00 2.44
76 77 8.560903 AGTAATGAAGTAGAAGGGGATGATTTT 58.439 33.333 0.00 0.00 0.00 1.82
77 78 7.995488 CAGTAATGAAGTAGAAGGGGATGATTT 59.005 37.037 0.00 0.00 0.00 2.17
78 79 7.420680 CCAGTAATGAAGTAGAAGGGGATGATT 60.421 40.741 0.00 0.00 0.00 2.57
79 80 6.043706 CCAGTAATGAAGTAGAAGGGGATGAT 59.956 42.308 0.00 0.00 0.00 2.45
80 81 5.366768 CCAGTAATGAAGTAGAAGGGGATGA 59.633 44.000 0.00 0.00 0.00 2.92
81 82 5.615289 CCAGTAATGAAGTAGAAGGGGATG 58.385 45.833 0.00 0.00 0.00 3.51
82 83 4.103311 GCCAGTAATGAAGTAGAAGGGGAT 59.897 45.833 0.00 0.00 0.00 3.85
83 84 3.454812 GCCAGTAATGAAGTAGAAGGGGA 59.545 47.826 0.00 0.00 0.00 4.81
84 85 3.456277 AGCCAGTAATGAAGTAGAAGGGG 59.544 47.826 0.00 0.00 0.00 4.79
85 86 4.162320 TCAGCCAGTAATGAAGTAGAAGGG 59.838 45.833 0.00 0.00 0.00 3.95
86 87 5.344743 TCAGCCAGTAATGAAGTAGAAGG 57.655 43.478 0.00 0.00 0.00 3.46
87 88 5.105146 ACCTCAGCCAGTAATGAAGTAGAAG 60.105 44.000 0.00 0.00 0.00 2.85
88 89 4.777896 ACCTCAGCCAGTAATGAAGTAGAA 59.222 41.667 0.00 0.00 0.00 2.10
89 90 4.353777 ACCTCAGCCAGTAATGAAGTAGA 58.646 43.478 0.00 0.00 0.00 2.59
90 91 4.744795 ACCTCAGCCAGTAATGAAGTAG 57.255 45.455 0.00 0.00 0.00 2.57
91 92 4.323485 CCAACCTCAGCCAGTAATGAAGTA 60.323 45.833 0.00 0.00 0.00 2.24
92 93 3.560025 CCAACCTCAGCCAGTAATGAAGT 60.560 47.826 0.00 0.00 0.00 3.01
93 94 3.012518 CCAACCTCAGCCAGTAATGAAG 58.987 50.000 0.00 0.00 0.00 3.02
94 95 2.290896 CCCAACCTCAGCCAGTAATGAA 60.291 50.000 0.00 0.00 0.00 2.57
95 96 1.281867 CCCAACCTCAGCCAGTAATGA 59.718 52.381 0.00 0.00 0.00 2.57
96 97 1.004745 ACCCAACCTCAGCCAGTAATG 59.995 52.381 0.00 0.00 0.00 1.90
97 98 1.282157 GACCCAACCTCAGCCAGTAAT 59.718 52.381 0.00 0.00 0.00 1.89
98 99 0.690762 GACCCAACCTCAGCCAGTAA 59.309 55.000 0.00 0.00 0.00 2.24
99 100 1.198759 GGACCCAACCTCAGCCAGTA 61.199 60.000 0.00 0.00 0.00 2.74
100 101 2.529744 GGACCCAACCTCAGCCAGT 61.530 63.158 0.00 0.00 0.00 4.00
101 102 1.783250 AAGGACCCAACCTCAGCCAG 61.783 60.000 0.00 0.00 39.62 4.85
102 103 1.774217 AAGGACCCAACCTCAGCCA 60.774 57.895 0.00 0.00 39.62 4.75
103 104 1.303643 CAAGGACCCAACCTCAGCC 60.304 63.158 0.00 0.00 39.62 4.85
104 105 0.329596 ATCAAGGACCCAACCTCAGC 59.670 55.000 0.00 0.00 39.62 4.26
105 106 1.952367 GCATCAAGGACCCAACCTCAG 60.952 57.143 0.00 0.00 39.62 3.35
106 107 0.038166 GCATCAAGGACCCAACCTCA 59.962 55.000 0.00 0.00 39.62 3.86
107 108 0.329596 AGCATCAAGGACCCAACCTC 59.670 55.000 0.00 0.00 39.62 3.85
108 109 0.779997 AAGCATCAAGGACCCAACCT 59.220 50.000 0.00 0.00 42.69 3.50
109 110 0.890683 CAAGCATCAAGGACCCAACC 59.109 55.000 0.00 0.00 0.00 3.77
110 111 0.244721 GCAAGCATCAAGGACCCAAC 59.755 55.000 0.00 0.00 0.00 3.77
111 112 0.178967 TGCAAGCATCAAGGACCCAA 60.179 50.000 0.00 0.00 0.00 4.12
112 113 0.895100 GTGCAAGCATCAAGGACCCA 60.895 55.000 0.00 0.00 0.00 4.51
113 114 0.610232 AGTGCAAGCATCAAGGACCC 60.610 55.000 0.00 0.00 0.00 4.46
114 115 0.807496 GAGTGCAAGCATCAAGGACC 59.193 55.000 0.00 0.00 0.00 4.46
115 116 0.445436 CGAGTGCAAGCATCAAGGAC 59.555 55.000 0.00 0.00 0.00 3.85
116 117 0.035317 ACGAGTGCAAGCATCAAGGA 59.965 50.000 0.00 0.00 0.00 3.36
117 118 1.725641 TACGAGTGCAAGCATCAAGG 58.274 50.000 0.00 0.00 0.00 3.61
118 119 3.242543 GGAATACGAGTGCAAGCATCAAG 60.243 47.826 0.00 0.00 0.00 3.02
119 120 2.677836 GGAATACGAGTGCAAGCATCAA 59.322 45.455 0.00 0.00 0.00 2.57
120 121 2.279741 GGAATACGAGTGCAAGCATCA 58.720 47.619 0.00 0.00 0.00 3.07
121 122 1.599542 GGGAATACGAGTGCAAGCATC 59.400 52.381 0.00 0.00 0.00 3.91
122 123 1.065491 TGGGAATACGAGTGCAAGCAT 60.065 47.619 0.00 0.00 0.00 3.79
123 124 0.323302 TGGGAATACGAGTGCAAGCA 59.677 50.000 0.00 0.00 0.00 3.91
124 125 1.448985 TTGGGAATACGAGTGCAAGC 58.551 50.000 0.00 0.00 0.00 4.01
125 126 3.809832 CCTATTGGGAATACGAGTGCAAG 59.190 47.826 0.00 0.00 37.23 4.01
126 127 3.452990 TCCTATTGGGAATACGAGTGCAA 59.547 43.478 0.00 0.00 41.91 4.08
127 128 3.035363 TCCTATTGGGAATACGAGTGCA 58.965 45.455 0.00 0.00 41.91 4.57
128 129 3.746045 TCCTATTGGGAATACGAGTGC 57.254 47.619 0.00 0.00 41.91 4.40
139 140 3.458189 GAGTGTGAACGATCCTATTGGG 58.542 50.000 0.00 0.00 0.00 4.12
140 141 3.458189 GGAGTGTGAACGATCCTATTGG 58.542 50.000 0.00 0.00 0.00 3.16
141 142 3.458189 GGGAGTGTGAACGATCCTATTG 58.542 50.000 0.00 0.00 32.18 1.90
142 143 2.100916 CGGGAGTGTGAACGATCCTATT 59.899 50.000 0.00 0.00 32.18 1.73
143 144 1.681793 CGGGAGTGTGAACGATCCTAT 59.318 52.381 0.00 0.00 32.18 2.57
144 145 1.100510 CGGGAGTGTGAACGATCCTA 58.899 55.000 0.00 0.00 32.18 2.94
145 146 0.898789 ACGGGAGTGTGAACGATCCT 60.899 55.000 0.00 0.00 44.82 3.24
146 147 1.590147 ACGGGAGTGTGAACGATCC 59.410 57.895 0.00 0.00 44.82 3.36
158 159 2.125753 GCTGCTCACTGACGGGAG 60.126 66.667 0.00 0.00 0.00 4.30
159 160 2.917227 TGCTGCTCACTGACGGGA 60.917 61.111 0.00 0.00 0.00 5.14
160 161 2.433838 CTGCTGCTCACTGACGGG 60.434 66.667 0.00 0.00 0.00 5.28
161 162 1.445754 CTCTGCTGCTCACTGACGG 60.446 63.158 0.00 0.00 0.00 4.79
162 163 0.319383 AACTCTGCTGCTCACTGACG 60.319 55.000 0.00 0.00 0.00 4.35
163 164 1.876322 AAACTCTGCTGCTCACTGAC 58.124 50.000 0.00 0.00 0.00 3.51
164 165 2.627515 AAAACTCTGCTGCTCACTGA 57.372 45.000 0.00 0.00 0.00 3.41
165 166 2.159234 GCTAAAACTCTGCTGCTCACTG 59.841 50.000 0.00 0.00 0.00 3.66
166 167 2.038295 AGCTAAAACTCTGCTGCTCACT 59.962 45.455 0.00 0.00 35.54 3.41
167 168 2.421619 AGCTAAAACTCTGCTGCTCAC 58.578 47.619 0.00 0.00 35.54 3.51
168 169 2.847327 AGCTAAAACTCTGCTGCTCA 57.153 45.000 0.00 0.00 35.54 4.26
169 170 3.616379 CAGTAGCTAAAACTCTGCTGCTC 59.384 47.826 0.00 0.00 45.28 4.26
170 171 3.971245 AGTAGCTAAAACTCTGCTGCT 57.029 42.857 0.00 0.00 43.04 4.24
171 172 2.675348 CCAGTAGCTAAAACTCTGCTGC 59.325 50.000 0.00 0.00 40.29 5.25
172 173 3.931578 ACCAGTAGCTAAAACTCTGCTG 58.068 45.455 0.00 0.00 40.96 4.41
173 174 4.625607 AACCAGTAGCTAAAACTCTGCT 57.374 40.909 0.00 0.00 40.43 4.24
174 175 4.515567 ACAAACCAGTAGCTAAAACTCTGC 59.484 41.667 0.00 0.00 0.00 4.26
175 176 7.116519 GTCTACAAACCAGTAGCTAAAACTCTG 59.883 40.741 0.00 0.00 40.95 3.35
176 177 7.153315 GTCTACAAACCAGTAGCTAAAACTCT 58.847 38.462 0.00 0.00 40.95 3.24
177 178 6.368243 GGTCTACAAACCAGTAGCTAAAACTC 59.632 42.308 0.00 0.00 40.95 3.01
178 179 6.042897 AGGTCTACAAACCAGTAGCTAAAACT 59.957 38.462 0.00 0.00 42.12 2.66
179 180 6.147328 CAGGTCTACAAACCAGTAGCTAAAAC 59.853 42.308 0.00 0.00 42.12 2.43
180 181 6.042322 TCAGGTCTACAAACCAGTAGCTAAAA 59.958 38.462 0.00 0.00 42.12 1.52
181 182 5.541101 TCAGGTCTACAAACCAGTAGCTAAA 59.459 40.000 0.00 0.00 42.12 1.85
182 183 5.081728 TCAGGTCTACAAACCAGTAGCTAA 58.918 41.667 0.00 0.00 42.12 3.09
183 184 4.669700 TCAGGTCTACAAACCAGTAGCTA 58.330 43.478 0.00 0.00 42.12 3.32
184 185 3.507411 TCAGGTCTACAAACCAGTAGCT 58.493 45.455 0.00 0.00 42.12 3.32
185 186 3.955650 TCAGGTCTACAAACCAGTAGC 57.044 47.619 0.00 0.00 42.12 3.58
186 187 5.171476 CACATCAGGTCTACAAACCAGTAG 58.829 45.833 0.00 0.00 42.12 2.57
187 188 4.020573 CCACATCAGGTCTACAAACCAGTA 60.021 45.833 0.00 0.00 42.12 2.74
188 189 3.244561 CCACATCAGGTCTACAAACCAGT 60.245 47.826 0.00 0.00 42.12 4.00
189 190 3.338249 CCACATCAGGTCTACAAACCAG 58.662 50.000 0.00 0.00 42.12 4.00
190 191 2.039746 CCCACATCAGGTCTACAAACCA 59.960 50.000 0.00 0.00 42.12 3.67
191 192 2.618045 CCCCACATCAGGTCTACAAACC 60.618 54.545 0.00 0.00 39.80 3.27
192 193 2.711542 CCCCACATCAGGTCTACAAAC 58.288 52.381 0.00 0.00 0.00 2.93
193 194 1.004277 GCCCCACATCAGGTCTACAAA 59.996 52.381 0.00 0.00 0.00 2.83
194 195 0.618458 GCCCCACATCAGGTCTACAA 59.382 55.000 0.00 0.00 0.00 2.41
195 196 0.252696 AGCCCCACATCAGGTCTACA 60.253 55.000 0.00 0.00 0.00 2.74
196 197 0.912486 AAGCCCCACATCAGGTCTAC 59.088 55.000 0.00 0.00 0.00 2.59
197 198 1.204146 GAAGCCCCACATCAGGTCTA 58.796 55.000 0.00 0.00 0.00 2.59
198 199 0.548682 AGAAGCCCCACATCAGGTCT 60.549 55.000 0.00 0.00 0.00 3.85
199 200 0.329596 AAGAAGCCCCACATCAGGTC 59.670 55.000 0.00 0.00 0.00 3.85
200 201 0.779997 AAAGAAGCCCCACATCAGGT 59.220 50.000 0.00 0.00 0.00 4.00
201 202 1.180029 CAAAGAAGCCCCACATCAGG 58.820 55.000 0.00 0.00 0.00 3.86
202 203 0.529378 GCAAAGAAGCCCCACATCAG 59.471 55.000 0.00 0.00 0.00 2.90
203 204 1.243342 CGCAAAGAAGCCCCACATCA 61.243 55.000 0.00 0.00 0.00 3.07
204 205 1.508088 CGCAAAGAAGCCCCACATC 59.492 57.895 0.00 0.00 0.00 3.06
205 206 2.639327 GCGCAAAGAAGCCCCACAT 61.639 57.895 0.30 0.00 0.00 3.21
206 207 3.294493 GCGCAAAGAAGCCCCACA 61.294 61.111 0.30 0.00 0.00 4.17
207 208 2.087462 AAAGCGCAAAGAAGCCCCAC 62.087 55.000 11.47 0.00 0.00 4.61
208 209 1.832167 AAAGCGCAAAGAAGCCCCA 60.832 52.632 11.47 0.00 0.00 4.96
209 210 1.373371 CAAAGCGCAAAGAAGCCCC 60.373 57.895 11.47 0.00 0.00 5.80
210 211 1.373371 CCAAAGCGCAAAGAAGCCC 60.373 57.895 11.47 0.00 0.00 5.19
211 212 2.023771 GCCAAAGCGCAAAGAAGCC 61.024 57.895 11.47 0.00 0.00 4.35
212 213 1.006922 AGCCAAAGCGCAAAGAAGC 60.007 52.632 11.47 4.43 46.67 3.86
213 214 1.280206 GCAGCCAAAGCGCAAAGAAG 61.280 55.000 11.47 0.00 46.67 2.85
214 215 1.300080 GCAGCCAAAGCGCAAAGAA 60.300 52.632 11.47 0.00 46.67 2.52
215 216 2.195567 AGCAGCCAAAGCGCAAAGA 61.196 52.632 11.47 0.00 46.67 2.52
216 217 2.019951 CAGCAGCCAAAGCGCAAAG 61.020 57.895 11.47 0.00 46.67 2.77
217 218 2.027897 CAGCAGCCAAAGCGCAAA 59.972 55.556 11.47 0.00 46.67 3.68
218 219 4.651008 GCAGCAGCCAAAGCGCAA 62.651 61.111 11.47 0.00 46.67 4.85
220 221 4.353437 AAGCAGCAGCCAAAGCGC 62.353 61.111 0.00 0.00 46.67 5.92
221 222 2.430244 CAAGCAGCAGCCAAAGCG 60.430 61.111 0.00 0.00 46.67 4.68
222 223 2.737376 GCAAGCAGCAGCCAAAGC 60.737 61.111 0.00 0.00 44.79 3.51
229 230 7.812133 TTCTCCTAAGAAGAGCAAGCAGCAG 62.812 48.000 0.00 0.00 40.29 4.24
230 231 6.079858 TTCTCCTAAGAAGAGCAAGCAGCA 62.080 45.833 0.00 0.00 40.29 4.41
231 232 2.093764 TCTCCTAAGAAGAGCAAGCAGC 60.094 50.000 0.00 0.00 46.19 5.25
232 233 3.883830 TCTCCTAAGAAGAGCAAGCAG 57.116 47.619 0.00 0.00 0.00 4.24
242 243 7.706100 GAGAGGAAGTTACTTCTCCTAAGAA 57.294 40.000 22.26 0.00 40.07 2.52
249 250 4.090819 ACCTGGAGAGGAAGTTACTTCTC 58.909 47.826 22.26 17.05 42.93 2.87
250 251 4.134933 ACCTGGAGAGGAAGTTACTTCT 57.865 45.455 22.26 10.22 42.93 2.85
251 252 4.322877 GGAACCTGGAGAGGAAGTTACTTC 60.323 50.000 16.07 16.07 42.93 3.01
252 253 3.583526 GGAACCTGGAGAGGAAGTTACTT 59.416 47.826 0.00 0.00 42.93 2.24
253 254 3.174779 GGAACCTGGAGAGGAAGTTACT 58.825 50.000 0.00 0.00 42.93 2.24
254 255 3.174779 AGGAACCTGGAGAGGAAGTTAC 58.825 50.000 0.00 0.00 42.93 2.50
255 256 3.562108 AGGAACCTGGAGAGGAAGTTA 57.438 47.619 0.00 0.00 42.93 2.24
256 257 2.424684 AGGAACCTGGAGAGGAAGTT 57.575 50.000 0.00 0.00 42.93 2.66
257 258 2.424684 AAGGAACCTGGAGAGGAAGT 57.575 50.000 0.00 0.00 42.93 3.01
258 259 5.663556 ACTAATAAGGAACCTGGAGAGGAAG 59.336 44.000 0.00 0.00 42.93 3.46
259 260 5.600749 ACTAATAAGGAACCTGGAGAGGAA 58.399 41.667 0.00 0.00 42.93 3.36
260 261 5.222278 ACTAATAAGGAACCTGGAGAGGA 57.778 43.478 0.00 0.00 42.93 3.71
261 262 6.137559 AGTACTAATAAGGAACCTGGAGAGG 58.862 44.000 0.00 0.00 46.21 3.69
262 263 6.016943 CGAGTACTAATAAGGAACCTGGAGAG 60.017 46.154 0.00 0.00 0.00 3.20
263 264 5.826737 CGAGTACTAATAAGGAACCTGGAGA 59.173 44.000 0.00 0.00 0.00 3.71
264 265 5.826737 TCGAGTACTAATAAGGAACCTGGAG 59.173 44.000 0.00 0.00 0.00 3.86
265 266 5.759059 TCGAGTACTAATAAGGAACCTGGA 58.241 41.667 0.00 0.00 0.00 3.86
266 267 6.461110 TTCGAGTACTAATAAGGAACCTGG 57.539 41.667 0.00 0.00 0.00 4.45
267 268 7.652507 GGAATTCGAGTACTAATAAGGAACCTG 59.347 40.741 0.00 0.00 0.00 4.00
268 269 7.564292 AGGAATTCGAGTACTAATAAGGAACCT 59.436 37.037 0.00 0.00 0.00 3.50
269 270 7.724287 AGGAATTCGAGTACTAATAAGGAACC 58.276 38.462 0.00 0.00 0.00 3.62
270 271 9.896263 CTAGGAATTCGAGTACTAATAAGGAAC 57.104 37.037 0.00 0.00 0.00 3.62
271 272 9.638176 ACTAGGAATTCGAGTACTAATAAGGAA 57.362 33.333 9.31 0.00 29.39 3.36
272 273 9.064706 CACTAGGAATTCGAGTACTAATAAGGA 57.935 37.037 10.39 0.00 30.07 3.36
273 274 8.298140 CCACTAGGAATTCGAGTACTAATAAGG 58.702 40.741 10.39 3.52 36.89 2.69
274 275 8.848182 ACCACTAGGAATTCGAGTACTAATAAG 58.152 37.037 10.39 0.00 38.69 1.73
275 276 8.757982 ACCACTAGGAATTCGAGTACTAATAA 57.242 34.615 10.39 0.00 38.69 1.40
276 277 8.627403 CAACCACTAGGAATTCGAGTACTAATA 58.373 37.037 10.39 0.00 38.69 0.98
277 278 7.417570 CCAACCACTAGGAATTCGAGTACTAAT 60.418 40.741 10.39 0.00 38.69 1.73
278 279 6.127535 CCAACCACTAGGAATTCGAGTACTAA 60.128 42.308 10.39 0.00 38.69 2.24
279 280 5.359009 CCAACCACTAGGAATTCGAGTACTA 59.641 44.000 10.39 0.95 38.69 1.82
280 281 4.159879 CCAACCACTAGGAATTCGAGTACT 59.840 45.833 10.39 0.00 38.69 2.73
281 282 4.081807 ACCAACCACTAGGAATTCGAGTAC 60.082 45.833 10.39 0.00 38.69 2.73
282 283 4.091549 ACCAACCACTAGGAATTCGAGTA 58.908 43.478 10.39 0.00 38.69 2.59
283 284 2.904434 ACCAACCACTAGGAATTCGAGT 59.096 45.455 5.95 5.95 38.69 4.18
284 285 3.611766 ACCAACCACTAGGAATTCGAG 57.388 47.619 0.00 2.00 38.69 4.04
285 286 4.141801 CCATACCAACCACTAGGAATTCGA 60.142 45.833 0.00 0.00 38.69 3.71
286 287 4.127171 CCATACCAACCACTAGGAATTCG 58.873 47.826 0.00 0.00 38.69 3.34
287 288 5.104485 AGACCATACCAACCACTAGGAATTC 60.104 44.000 0.00 0.00 38.69 2.17
288 289 4.788617 AGACCATACCAACCACTAGGAATT 59.211 41.667 0.00 0.00 38.69 2.17
289 290 4.164221 CAGACCATACCAACCACTAGGAAT 59.836 45.833 0.00 0.00 38.69 3.01
290 291 3.517901 CAGACCATACCAACCACTAGGAA 59.482 47.826 0.00 0.00 38.69 3.36
291 292 3.104512 CAGACCATACCAACCACTAGGA 58.895 50.000 0.00 0.00 38.69 2.94
292 293 3.104512 TCAGACCATACCAACCACTAGG 58.895 50.000 0.00 0.00 42.21 3.02
293 294 3.769844 ACTCAGACCATACCAACCACTAG 59.230 47.826 0.00 0.00 0.00 2.57
294 295 3.767673 GACTCAGACCATACCAACCACTA 59.232 47.826 0.00 0.00 0.00 2.74
295 296 2.567615 GACTCAGACCATACCAACCACT 59.432 50.000 0.00 0.00 0.00 4.00
296 297 2.567615 AGACTCAGACCATACCAACCAC 59.432 50.000 0.00 0.00 0.00 4.16
297 298 2.902608 AGACTCAGACCATACCAACCA 58.097 47.619 0.00 0.00 0.00 3.67
298 299 3.983044 AAGACTCAGACCATACCAACC 57.017 47.619 0.00 0.00 0.00 3.77
299 300 4.003648 CCAAAGACTCAGACCATACCAAC 58.996 47.826 0.00 0.00 0.00 3.77
300 301 3.650942 ACCAAAGACTCAGACCATACCAA 59.349 43.478 0.00 0.00 0.00 3.67
301 302 3.248024 ACCAAAGACTCAGACCATACCA 58.752 45.455 0.00 0.00 0.00 3.25
302 303 3.983044 ACCAAAGACTCAGACCATACC 57.017 47.619 0.00 0.00 0.00 2.73
303 304 4.254492 GGAACCAAAGACTCAGACCATAC 58.746 47.826 0.00 0.00 0.00 2.39
304 305 4.553330 GGAACCAAAGACTCAGACCATA 57.447 45.455 0.00 0.00 0.00 2.74
305 306 3.425162 GGAACCAAAGACTCAGACCAT 57.575 47.619 0.00 0.00 0.00 3.55
306 307 2.930826 GGAACCAAAGACTCAGACCA 57.069 50.000 0.00 0.00 0.00 4.02
323 324 1.002624 GCGACAATTCCACCAGGGA 60.003 57.895 0.00 0.00 46.61 4.20
324 325 1.002134 AGCGACAATTCCACCAGGG 60.002 57.895 0.00 0.00 34.83 4.45
325 326 1.308069 CCAGCGACAATTCCACCAGG 61.308 60.000 0.00 0.00 0.00 4.45
326 327 1.926511 GCCAGCGACAATTCCACCAG 61.927 60.000 0.00 0.00 0.00 4.00
327 328 1.971167 GCCAGCGACAATTCCACCA 60.971 57.895 0.00 0.00 0.00 4.17
328 329 2.700773 GGCCAGCGACAATTCCACC 61.701 63.158 0.00 0.00 0.00 4.61
329 330 1.675641 AGGCCAGCGACAATTCCAC 60.676 57.895 5.01 0.00 0.00 4.02
330 331 1.675310 CAGGCCAGCGACAATTCCA 60.675 57.895 5.01 0.00 0.00 3.53
331 332 3.056313 GCAGGCCAGCGACAATTCC 62.056 63.158 3.62 0.00 0.00 3.01
332 333 2.042831 AGCAGGCCAGCGACAATTC 61.043 57.895 15.17 0.00 40.15 2.17
333 334 2.034687 AGCAGGCCAGCGACAATT 59.965 55.556 15.17 0.00 40.15 2.32
334 335 2.749044 CAGCAGGCCAGCGACAAT 60.749 61.111 15.17 0.00 40.15 2.71
340 341 2.273912 AAAGAAGCAGCAGGCCAGC 61.274 57.895 13.11 13.11 46.50 4.85
341 342 1.585006 CAAAGAAGCAGCAGGCCAG 59.415 57.895 5.01 0.00 46.50 4.85
342 343 2.567497 GCAAAGAAGCAGCAGGCCA 61.567 57.895 5.01 0.00 46.50 5.36
343 344 2.260743 GCAAAGAAGCAGCAGGCC 59.739 61.111 0.00 0.00 46.50 5.19
344 345 3.045142 TGCAAAGAAGCAGCAGGC 58.955 55.556 0.00 0.00 40.11 4.85
351 352 2.286654 GGCGTCATCTATGCAAAGAAGC 60.287 50.000 0.00 0.00 42.33 3.86
352 353 2.289002 GGGCGTCATCTATGCAAAGAAG 59.711 50.000 0.00 0.00 42.33 2.85
353 354 2.092968 AGGGCGTCATCTATGCAAAGAA 60.093 45.455 0.00 0.00 42.33 2.52
354 355 1.486310 AGGGCGTCATCTATGCAAAGA 59.514 47.619 0.00 0.00 42.33 2.52
355 356 1.869767 GAGGGCGTCATCTATGCAAAG 59.130 52.381 1.64 0.00 42.33 2.77
356 357 1.209261 TGAGGGCGTCATCTATGCAAA 59.791 47.619 5.66 0.00 42.33 3.68
357 358 0.829990 TGAGGGCGTCATCTATGCAA 59.170 50.000 5.66 0.00 42.33 4.08
358 359 0.390492 CTGAGGGCGTCATCTATGCA 59.610 55.000 10.69 0.00 42.33 3.96
359 360 0.320247 CCTGAGGGCGTCATCTATGC 60.320 60.000 10.69 0.00 39.58 3.14
360 361 1.271934 CTCCTGAGGGCGTCATCTATG 59.728 57.143 10.69 0.00 33.51 2.23
361 362 1.133325 ACTCCTGAGGGCGTCATCTAT 60.133 52.381 10.69 0.00 33.51 1.98
362 363 0.259065 ACTCCTGAGGGCGTCATCTA 59.741 55.000 10.69 0.00 33.51 1.98
363 364 1.000993 ACTCCTGAGGGCGTCATCT 59.999 57.895 10.69 0.00 33.51 2.90
364 365 1.439644 GACTCCTGAGGGCGTCATC 59.560 63.158 10.69 0.00 44.32 2.92
365 366 3.622514 GACTCCTGAGGGCGTCAT 58.377 61.111 10.69 0.00 44.32 3.06
367 368 2.716017 CCTGACTCCTGAGGGCGTC 61.716 68.421 12.80 12.80 44.93 5.19
368 369 2.681778 CCTGACTCCTGAGGGCGT 60.682 66.667 0.00 0.00 32.60 5.68
369 370 1.333636 ATTCCTGACTCCTGAGGGCG 61.334 60.000 0.00 0.00 0.00 6.13
370 371 1.414550 GTATTCCTGACTCCTGAGGGC 59.585 57.143 0.00 0.00 0.00 5.19
371 372 2.043227 GGTATTCCTGACTCCTGAGGG 58.957 57.143 0.00 0.00 0.00 4.30
372 373 3.039252 AGGTATTCCTGACTCCTGAGG 57.961 52.381 0.00 0.00 43.33 3.86
373 374 5.055265 TCTAGGTATTCCTGACTCCTGAG 57.945 47.826 0.22 0.00 44.81 3.35
374 375 4.690261 GCTCTAGGTATTCCTGACTCCTGA 60.690 50.000 0.22 0.00 44.81 3.86
375 376 3.572255 GCTCTAGGTATTCCTGACTCCTG 59.428 52.174 0.22 0.00 44.81 3.86
376 377 3.749310 CGCTCTAGGTATTCCTGACTCCT 60.749 52.174 0.22 0.00 44.81 3.69
377 378 2.554893 CGCTCTAGGTATTCCTGACTCC 59.445 54.545 0.22 0.00 44.81 3.85
378 379 3.215975 ACGCTCTAGGTATTCCTGACTC 58.784 50.000 0.22 0.00 44.81 3.36
379 380 3.300239 ACGCTCTAGGTATTCCTGACT 57.700 47.619 0.22 0.00 44.81 3.41
380 381 5.708877 AATACGCTCTAGGTATTCCTGAC 57.291 43.478 0.22 0.00 44.81 3.51
535 544 3.157087 TGTATGCATATCTCTCCTCGCA 58.843 45.455 10.16 0.00 0.00 5.10
537 546 4.095632 ACGATGTATGCATATCTCTCCTCG 59.904 45.833 10.16 12.34 35.07 4.63
562 580 2.844839 GGGGACAGCGATAGGGCT 60.845 66.667 0.00 0.00 46.13 5.19
605 628 3.551407 GGGAGGAGATCGGTGGGC 61.551 72.222 0.00 0.00 0.00 5.36
606 629 2.844839 GGGGAGGAGATCGGTGGG 60.845 72.222 0.00 0.00 0.00 4.61
607 630 3.227276 CGGGGAGGAGATCGGTGG 61.227 72.222 0.00 0.00 0.00 4.61
632 655 1.573857 TGGTAGCATCTGGAGTAGGGA 59.426 52.381 0.00 0.00 0.00 4.20
652 686 6.511017 TTGATCTTCCTTCATCATCTGGAT 57.489 37.500 0.00 0.00 36.39 3.41
746 782 6.314784 ACAAATCGAAATTGATCCGTTTCTC 58.685 36.000 17.99 0.00 33.32 2.87
803 839 8.162878 ACCGATTTACTATTATCTCACGAGAA 57.837 34.615 0.00 0.00 41.36 2.87
848 907 3.520402 GGAGACGGAGGAGCTGAG 58.480 66.667 0.00 0.00 0.00 3.35
890 952 2.287308 CCGATCCTACTCGCAGAAGAAG 60.287 54.545 0.00 0.00 37.33 2.85
896 958 0.535328 TCCTCCGATCCTACTCGCAG 60.535 60.000 0.00 0.00 37.33 5.18
935 999 1.416049 CGACAATGGTGAACGCTCG 59.584 57.895 0.00 0.00 0.00 5.03
994 1099 2.224305 ACCTATTAAGCTCCATGGCGAC 60.224 50.000 6.96 0.00 37.29 5.19
1245 1448 1.271102 CTCGCTTAGCCTGTCCCTATC 59.729 57.143 0.00 0.00 0.00 2.08
1379 1582 5.814188 GTCATCAGTGCTAAGATCAATCACA 59.186 40.000 0.00 0.00 0.00 3.58
1953 2156 2.683211 AGCTCAGGGACAAAACCAAT 57.317 45.000 0.00 0.00 0.00 3.16
2170 2378 2.282674 CACACAGCCATGGCCAGT 60.283 61.111 33.14 27.46 43.17 4.00
2182 2390 3.285982 CACACATGGGCGCACACA 61.286 61.111 18.24 8.04 0.00 3.72
2206 2414 3.563088 CGCGCACACACACACACT 61.563 61.111 8.75 0.00 0.00 3.55
2315 2523 5.715753 AGTATTTTTGGACGGAGAGAGTACT 59.284 40.000 0.00 0.00 0.00 2.73
2316 2524 5.963594 AGTATTTTTGGACGGAGAGAGTAC 58.036 41.667 0.00 0.00 0.00 2.73
2317 2525 6.014840 ACAAGTATTTTTGGACGGAGAGAGTA 60.015 38.462 0.00 0.00 32.32 2.59
2318 2526 5.221661 ACAAGTATTTTTGGACGGAGAGAGT 60.222 40.000 0.00 0.00 32.32 3.24
2319 2527 5.238583 ACAAGTATTTTTGGACGGAGAGAG 58.761 41.667 0.00 0.00 32.32 3.20
2320 2528 5.221561 TGACAAGTATTTTTGGACGGAGAGA 60.222 40.000 0.00 0.00 32.32 3.10
2321 2529 4.994852 TGACAAGTATTTTTGGACGGAGAG 59.005 41.667 0.00 0.00 32.32 3.20
2322 2530 4.963373 TGACAAGTATTTTTGGACGGAGA 58.037 39.130 0.00 0.00 32.32 3.71
2323 2531 5.445939 CGATGACAAGTATTTTTGGACGGAG 60.446 44.000 0.00 0.00 32.32 4.63
2324 2532 4.390603 CGATGACAAGTATTTTTGGACGGA 59.609 41.667 0.00 0.00 32.32 4.69
2325 2533 4.390603 TCGATGACAAGTATTTTTGGACGG 59.609 41.667 0.00 0.00 32.32 4.79
2326 2534 5.524511 TCGATGACAAGTATTTTTGGACG 57.475 39.130 0.00 0.00 32.32 4.79
2327 2535 7.273381 CCATTTCGATGACAAGTATTTTTGGAC 59.727 37.037 0.00 0.00 32.32 4.02
2328 2536 7.175816 TCCATTTCGATGACAAGTATTTTTGGA 59.824 33.333 0.00 0.00 32.32 3.53
2329 2537 7.273381 GTCCATTTCGATGACAAGTATTTTTGG 59.727 37.037 0.00 0.00 32.32 3.28
2330 2538 7.807433 TGTCCATTTCGATGACAAGTATTTTTG 59.193 33.333 5.46 0.00 0.00 2.44
2331 2539 7.881142 TGTCCATTTCGATGACAAGTATTTTT 58.119 30.769 5.46 0.00 0.00 1.94
2332 2540 7.447374 TGTCCATTTCGATGACAAGTATTTT 57.553 32.000 5.46 0.00 0.00 1.82
2333 2541 7.447374 TTGTCCATTTCGATGACAAGTATTT 57.553 32.000 13.14 0.00 32.78 1.40
2334 2542 7.447374 TTTGTCCATTTCGATGACAAGTATT 57.553 32.000 15.31 0.00 37.13 1.89
2335 2543 7.447374 TTTTGTCCATTTCGATGACAAGTAT 57.553 32.000 15.31 0.00 37.13 2.12
2336 2544 6.869315 TTTTGTCCATTTCGATGACAAGTA 57.131 33.333 15.31 8.92 37.13 2.24
2337 2545 5.766150 TTTTGTCCATTTCGATGACAAGT 57.234 34.783 15.31 0.00 37.13 3.16
2338 2546 5.630680 CCTTTTTGTCCATTTCGATGACAAG 59.369 40.000 15.31 8.27 37.13 3.16
2339 2547 5.300539 TCCTTTTTGTCCATTTCGATGACAA 59.699 36.000 13.14 13.14 34.47 3.18
2340 2548 4.824537 TCCTTTTTGTCCATTTCGATGACA 59.175 37.500 4.18 4.18 0.00 3.58
2341 2549 5.371115 TCCTTTTTGTCCATTTCGATGAC 57.629 39.130 0.00 0.00 0.00 3.06
2342 2550 6.015519 ACATTCCTTTTTGTCCATTTCGATGA 60.016 34.615 0.00 0.00 0.00 2.92
2343 2551 6.158598 ACATTCCTTTTTGTCCATTTCGATG 58.841 36.000 0.00 0.00 0.00 3.84
2344 2552 6.345096 ACATTCCTTTTTGTCCATTTCGAT 57.655 33.333 0.00 0.00 0.00 3.59
2345 2553 5.782893 ACATTCCTTTTTGTCCATTTCGA 57.217 34.783 0.00 0.00 0.00 3.71
2346 2554 7.538575 AGATACATTCCTTTTTGTCCATTTCG 58.461 34.615 0.00 0.00 0.00 3.46
2348 2556 9.753674 TCTAGATACATTCCTTTTTGTCCATTT 57.246 29.630 0.00 0.00 0.00 2.32
2349 2557 9.753674 TTCTAGATACATTCCTTTTTGTCCATT 57.246 29.630 0.00 0.00 0.00 3.16
2350 2558 9.178758 GTTCTAGATACATTCCTTTTTGTCCAT 57.821 33.333 0.00 0.00 0.00 3.41
2351 2559 8.383175 AGTTCTAGATACATTCCTTTTTGTCCA 58.617 33.333 0.00 0.00 0.00 4.02
2352 2560 8.794335 AGTTCTAGATACATTCCTTTTTGTCC 57.206 34.615 0.00 0.00 0.00 4.02
2383 2591 9.607333 TGGATAAAAGGAGATGTATCTAGATGT 57.393 33.333 15.79 1.25 37.25 3.06
2392 2600 9.919416 TCATCAAAATGGATAAAAGGAGATGTA 57.081 29.630 0.00 0.00 33.42 2.29
2393 2601 8.689972 GTCATCAAAATGGATAAAAGGAGATGT 58.310 33.333 0.00 0.00 33.42 3.06
2394 2602 8.689061 TGTCATCAAAATGGATAAAAGGAGATG 58.311 33.333 0.00 0.00 33.42 2.90
2395 2603 8.827832 TGTCATCAAAATGGATAAAAGGAGAT 57.172 30.769 0.00 0.00 33.42 2.75
2396 2604 8.648698 TTGTCATCAAAATGGATAAAAGGAGA 57.351 30.769 0.00 0.00 33.42 3.71
2397 2605 8.526147 ACTTGTCATCAAAATGGATAAAAGGAG 58.474 33.333 0.00 0.00 33.42 3.69
2398 2606 8.421249 ACTTGTCATCAAAATGGATAAAAGGA 57.579 30.769 0.00 0.00 33.42 3.36
2403 2611 8.620416 CGGAATACTTGTCATCAAAATGGATAA 58.380 33.333 0.00 0.00 33.42 1.75
2404 2612 7.228507 CCGGAATACTTGTCATCAAAATGGATA 59.771 37.037 0.00 0.00 33.42 2.59
2405 2613 6.039717 CCGGAATACTTGTCATCAAAATGGAT 59.960 38.462 0.00 0.00 33.42 3.41
2406 2614 5.356751 CCGGAATACTTGTCATCAAAATGGA 59.643 40.000 0.00 0.00 33.42 3.41
2407 2615 5.356751 TCCGGAATACTTGTCATCAAAATGG 59.643 40.000 0.00 0.00 33.42 3.16
2408 2616 6.258160 GTCCGGAATACTTGTCATCAAAATG 58.742 40.000 5.23 0.00 32.87 2.32
2409 2617 5.064707 CGTCCGGAATACTTGTCATCAAAAT 59.935 40.000 5.23 0.00 32.87 1.82
2410 2618 4.390603 CGTCCGGAATACTTGTCATCAAAA 59.609 41.667 5.23 0.00 32.87 2.44
2411 2619 3.930229 CGTCCGGAATACTTGTCATCAAA 59.070 43.478 5.23 0.00 32.87 2.69
2412 2620 3.517602 CGTCCGGAATACTTGTCATCAA 58.482 45.455 5.23 0.00 0.00 2.57
2413 2621 2.159156 CCGTCCGGAATACTTGTCATCA 60.159 50.000 5.23 0.00 37.50 3.07
2414 2622 2.100252 TCCGTCCGGAATACTTGTCATC 59.900 50.000 5.23 0.00 42.05 2.92
2415 2623 2.100916 CTCCGTCCGGAATACTTGTCAT 59.899 50.000 5.23 0.00 44.66 3.06
2416 2624 1.475280 CTCCGTCCGGAATACTTGTCA 59.525 52.381 5.23 0.00 44.66 3.58
2417 2625 1.202382 CCTCCGTCCGGAATACTTGTC 60.202 57.143 5.23 0.00 44.66 3.18
2418 2626 0.822164 CCTCCGTCCGGAATACTTGT 59.178 55.000 5.23 0.00 44.66 3.16
2419 2627 0.104304 CCCTCCGTCCGGAATACTTG 59.896 60.000 5.23 0.00 44.66 3.16
2420 2628 0.032813 TCCCTCCGTCCGGAATACTT 60.033 55.000 5.23 0.00 44.66 2.24
2421 2629 0.467659 CTCCCTCCGTCCGGAATACT 60.468 60.000 5.23 0.00 44.66 2.12
2422 2630 0.754587 ACTCCCTCCGTCCGGAATAC 60.755 60.000 5.23 0.00 44.66 1.89
2423 2631 0.846015 TACTCCCTCCGTCCGGAATA 59.154 55.000 5.23 0.00 44.66 1.75
2424 2632 0.467659 CTACTCCCTCCGTCCGGAAT 60.468 60.000 5.23 0.00 44.66 3.01
2425 2633 1.077212 CTACTCCCTCCGTCCGGAA 60.077 63.158 5.23 0.00 44.66 4.30
2426 2634 0.982852 TACTACTCCCTCCGTCCGGA 60.983 60.000 0.00 0.00 42.90 5.14
2427 2635 0.534652 CTACTACTCCCTCCGTCCGG 60.535 65.000 0.00 0.00 0.00 5.14
2428 2636 0.467384 TCTACTACTCCCTCCGTCCG 59.533 60.000 0.00 0.00 0.00 4.79
2429 2637 2.106166 TCATCTACTACTCCCTCCGTCC 59.894 54.545 0.00 0.00 0.00 4.79
2430 2638 3.488778 TCATCTACTACTCCCTCCGTC 57.511 52.381 0.00 0.00 0.00 4.79
2431 2639 3.947612 TTCATCTACTACTCCCTCCGT 57.052 47.619 0.00 0.00 0.00 4.69
2432 2640 4.145807 ACATTCATCTACTACTCCCTCCG 58.854 47.826 0.00 0.00 0.00 4.63
2433 2641 5.712917 CCTACATTCATCTACTACTCCCTCC 59.287 48.000 0.00 0.00 0.00 4.30
2434 2642 5.184287 GCCTACATTCATCTACTACTCCCTC 59.816 48.000 0.00 0.00 0.00 4.30
2435 2643 5.081032 GCCTACATTCATCTACTACTCCCT 58.919 45.833 0.00 0.00 0.00 4.20
2436 2644 4.221041 GGCCTACATTCATCTACTACTCCC 59.779 50.000 0.00 0.00 0.00 4.30
2437 2645 4.221041 GGGCCTACATTCATCTACTACTCC 59.779 50.000 0.84 0.00 0.00 3.85
2438 2646 5.081032 AGGGCCTACATTCATCTACTACTC 58.919 45.833 2.82 0.00 0.00 2.59
2744 2996 1.455786 CGTCTCGTCGTTTTGAGCAAT 59.544 47.619 0.00 0.00 32.20 3.56
2752 3004 0.455633 CCGGATTCGTCTCGTCGTTT 60.456 55.000 0.00 0.00 33.95 3.60
2785 3037 0.686441 TAGGGATGTGTGGAGGACGG 60.686 60.000 0.00 0.00 0.00 4.79
3104 3396 2.149578 GAGAGAATGGAATGGGCGATG 58.850 52.381 0.00 0.00 0.00 3.84
3286 3599 4.873746 TGATCGGGTCTTCTGATAATCC 57.126 45.455 0.00 0.00 41.33 3.01
3347 3661 3.083122 AGAGTCGAGCAACTAAGGGTA 57.917 47.619 0.00 0.00 0.00 3.69
3348 3662 1.926108 AGAGTCGAGCAACTAAGGGT 58.074 50.000 0.00 0.00 0.00 4.34
3407 3721 4.974645 ACAGGGTTAACATCTGAAGTGA 57.025 40.909 25.22 0.00 33.19 3.41
3414 3728 5.024118 AGCTACACTACAGGGTTAACATCT 58.976 41.667 8.10 1.39 0.00 2.90
3457 3771 5.584551 AGTGGTTAAAGAGGAAATCACCT 57.415 39.130 0.00 0.00 43.64 4.00
3592 3908 5.048713 GTGTGTCTAAACATCAAGGGGAAAG 60.049 44.000 0.00 0.00 37.81 2.62
3648 3964 2.934553 GACCCGTCTTTAGTAACATGGC 59.065 50.000 0.00 0.00 0.00 4.40
3683 4002 3.573491 AATTAAGCTCGCGCGGGC 61.573 61.111 45.53 45.53 43.08 6.13
3816 4135 3.179443 ACAAGCAGAGACTCACGAAAA 57.821 42.857 5.02 0.00 0.00 2.29
4025 4347 3.491342 CTGGTGAGCAGACCTAGCTATA 58.509 50.000 5.59 0.00 43.58 1.31
4026 4348 2.315176 CTGGTGAGCAGACCTAGCTAT 58.685 52.381 5.59 0.00 43.58 2.97
4055 4377 1.070786 GGGAACTCCTGCACGTTGA 59.929 57.895 0.00 0.00 35.95 3.18
4213 4535 0.250124 CAACTTACCCACCACGCTCA 60.250 55.000 0.00 0.00 0.00 4.26
4343 4665 4.639078 TCCAGTTCTCATCACCATCAAA 57.361 40.909 0.00 0.00 0.00 2.69
4345 4667 3.118149 CCATCCAGTTCTCATCACCATCA 60.118 47.826 0.00 0.00 0.00 3.07
4360 4682 2.505407 TCCAGTTACCATCACCATCCAG 59.495 50.000 0.00 0.00 0.00 3.86
4366 4688 5.794894 CCATACTATCCAGTTACCATCACC 58.205 45.833 0.00 0.00 36.14 4.02
4373 4695 4.021016 CCCAGAGCCATACTATCCAGTTAC 60.021 50.000 0.00 0.00 36.14 2.50
4399 4721 0.457851 CGACTCCCTGCGAGAAAGAT 59.542 55.000 0.00 0.00 41.63 2.40
4471 4796 3.964031 AGCAAATAGGAGGGAGTAGAGTG 59.036 47.826 0.00 0.00 0.00 3.51
4488 4813 1.412079 AACCACCATCTTGCAGCAAA 58.588 45.000 9.65 0.91 0.00 3.68
4583 4913 5.260424 TGCAACATTATCAAAGGAAGGCTA 58.740 37.500 0.00 0.00 0.00 3.93
4672 5006 4.082845 GGAAAGAAGAAGAAAGGGGGAAG 58.917 47.826 0.00 0.00 0.00 3.46
4734 5068 1.454295 TAGTAGGCATCGGCGGTGA 60.454 57.895 26.58 0.00 42.47 4.02
4914 5248 2.965831 AGGGCTCGAATACATAAGCTCA 59.034 45.455 0.00 0.00 37.71 4.26
5009 5344 5.360999 TGTACGATCAAGATCAAGGACTCAT 59.639 40.000 10.39 0.00 37.69 2.90
5080 5415 1.103803 TCAAAGGAGAGGGACGATCG 58.896 55.000 14.88 14.88 0.00 3.69
5083 5418 1.103803 CGATCAAAGGAGAGGGACGA 58.896 55.000 0.00 0.00 0.00 4.20
5084 5419 1.103803 TCGATCAAAGGAGAGGGACG 58.896 55.000 0.00 0.00 0.00 4.79
5085 5420 2.104170 AGTCGATCAAAGGAGAGGGAC 58.896 52.381 0.00 0.00 0.00 4.46
5086 5421 2.534042 AGTCGATCAAAGGAGAGGGA 57.466 50.000 0.00 0.00 0.00 4.20
5087 5422 3.024547 TGTAGTCGATCAAAGGAGAGGG 58.975 50.000 0.00 0.00 0.00 4.30
5088 5423 4.865776 GATGTAGTCGATCAAAGGAGAGG 58.134 47.826 0.00 0.00 0.00 3.69
5102 5437 0.386113 GCTCACCCTCCGATGTAGTC 59.614 60.000 0.00 0.00 0.00 2.59
5103 5438 0.324368 TGCTCACCCTCCGATGTAGT 60.324 55.000 0.00 0.00 0.00 2.73
5104 5439 0.824109 TTGCTCACCCTCCGATGTAG 59.176 55.000 0.00 0.00 0.00 2.74
5105 5440 0.535335 GTTGCTCACCCTCCGATGTA 59.465 55.000 0.00 0.00 0.00 2.29
5106 5441 1.296715 GTTGCTCACCCTCCGATGT 59.703 57.895 0.00 0.00 0.00 3.06
5107 5442 0.321564 TTGTTGCTCACCCTCCGATG 60.322 55.000 0.00 0.00 0.00 3.84
5108 5443 0.620556 ATTGTTGCTCACCCTCCGAT 59.379 50.000 0.00 0.00 0.00 4.18
5109 5444 0.400213 AATTGTTGCTCACCCTCCGA 59.600 50.000 0.00 0.00 0.00 4.55
5110 5445 0.804989 GAATTGTTGCTCACCCTCCG 59.195 55.000 0.00 0.00 0.00 4.63
5111 5446 1.177401 GGAATTGTTGCTCACCCTCC 58.823 55.000 0.00 0.00 0.00 4.30
5112 5447 1.909700 TGGAATTGTTGCTCACCCTC 58.090 50.000 0.00 0.00 0.00 4.30
5113 5448 2.173519 CATGGAATTGTTGCTCACCCT 58.826 47.619 0.00 0.00 0.00 4.34
5114 5449 2.094545 GTCATGGAATTGTTGCTCACCC 60.095 50.000 0.00 0.00 0.00 4.61
5115 5450 2.094545 GGTCATGGAATTGTTGCTCACC 60.095 50.000 0.00 0.00 0.00 4.02
5116 5451 2.821969 AGGTCATGGAATTGTTGCTCAC 59.178 45.455 0.00 0.00 0.00 3.51
5117 5452 3.084039 GAGGTCATGGAATTGTTGCTCA 58.916 45.455 0.00 0.00 0.00 4.26
5118 5453 2.096496 CGAGGTCATGGAATTGTTGCTC 59.904 50.000 0.00 0.00 0.00 4.26
5119 5454 2.086869 CGAGGTCATGGAATTGTTGCT 58.913 47.619 0.00 0.00 0.00 3.91
5120 5455 1.812571 ACGAGGTCATGGAATTGTTGC 59.187 47.619 0.00 0.00 0.00 4.17
5121 5456 2.420022 GGACGAGGTCATGGAATTGTTG 59.580 50.000 0.00 0.00 33.68 3.33
5122 5457 2.039746 TGGACGAGGTCATGGAATTGTT 59.960 45.455 0.00 0.00 33.68 2.83
5123 5458 1.628340 TGGACGAGGTCATGGAATTGT 59.372 47.619 0.00 0.00 33.68 2.71
5124 5459 2.009774 GTGGACGAGGTCATGGAATTG 58.990 52.381 0.00 0.00 33.68 2.32
5125 5460 1.909302 AGTGGACGAGGTCATGGAATT 59.091 47.619 0.00 0.00 33.68 2.17
5126 5461 1.573108 AGTGGACGAGGTCATGGAAT 58.427 50.000 0.00 0.00 33.68 3.01
5127 5462 1.348064 AAGTGGACGAGGTCATGGAA 58.652 50.000 0.00 0.00 33.68 3.53
5128 5463 1.348064 AAAGTGGACGAGGTCATGGA 58.652 50.000 0.00 0.00 33.68 3.41
5129 5464 2.185004 AAAAGTGGACGAGGTCATGG 57.815 50.000 0.00 0.00 33.68 3.66
5448 5783 4.098044 CAGGTAGATGTGGTAGTACTGTGG 59.902 50.000 5.39 0.00 0.00 4.17
5722 6057 4.169696 CCACGATTAGCCCGGGCA 62.170 66.667 45.13 28.44 44.88 5.36
5734 6069 1.144276 TGTGCCGTCTTTTCCACGA 59.856 52.632 0.00 0.00 39.75 4.35
5749 6084 1.358759 GTTTCCTTGGCCGTGTGTG 59.641 57.895 0.00 0.00 0.00 3.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.