Multiple sequence alignment - TraesCS6B01G437200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G437200 chr6B 100.000 4086 0 0 1 4086 704370677 704374762 0.000000e+00 7546.0
1 TraesCS6B01G437200 chr6B 82.601 1638 234 25 1581 3184 704187319 704188939 0.000000e+00 1399.0
2 TraesCS6B01G437200 chr6B 81.137 1442 240 22 1717 3134 704177940 704176507 0.000000e+00 1127.0
3 TraesCS6B01G437200 chr6B 80.730 1479 252 24 1717 3184 704183883 704182427 0.000000e+00 1122.0
4 TraesCS6B01G437200 chr6B 82.210 905 156 4 1679 2579 704438789 704439692 0.000000e+00 774.0
5 TraesCS6B01G437200 chr6B 100.000 349 0 0 4342 4690 704375018 704375366 0.000000e+00 645.0
6 TraesCS6B01G437200 chr6B 80.614 619 77 24 863 1473 704438053 704438636 5.570000e-119 438.0
7 TraesCS6B01G437200 chr6B 92.353 170 12 1 1575 1744 704438641 704438809 1.690000e-59 241.0
8 TraesCS6B01G437200 chr6B 92.593 108 4 4 1472 1577 704372253 704372148 8.130000e-33 152.0
9 TraesCS6B01G437200 chr6A 96.805 2754 66 9 852 3600 608977585 608980321 0.000000e+00 4578.0
10 TraesCS6B01G437200 chr6A 83.081 1584 227 24 1581 3129 608710054 608711631 0.000000e+00 1402.0
11 TraesCS6B01G437200 chr6A 80.108 1659 283 28 1679 3301 609003332 609004979 0.000000e+00 1192.0
12 TraesCS6B01G437200 chr6A 80.845 1467 244 30 1717 3155 608902287 608900830 0.000000e+00 1118.0
13 TraesCS6B01G437200 chr6A 83.770 801 129 1 1581 2381 608967723 608968522 0.000000e+00 758.0
14 TraesCS6B01G437200 chr6A 84.345 626 62 15 863 1473 609002574 609003178 8.750000e-162 580.0
15 TraesCS6B01G437200 chr6A 93.048 187 10 2 3806 3991 608980893 608981077 2.150000e-68 270.0
16 TraesCS6B01G437200 chr6A 88.235 170 20 0 1575 1744 609003183 609003352 2.210000e-48 204.0
17 TraesCS6B01G437200 chr6A 92.143 140 9 1 3675 3812 608980716 608980855 3.700000e-46 196.0
18 TraesCS6B01G437200 chr6A 94.000 100 5 1 3482 3581 608980256 608980354 2.920000e-32 150.0
19 TraesCS6B01G437200 chr6A 89.720 107 9 2 1472 1577 608978310 608978205 8.190000e-28 135.0
20 TraesCS6B01G437200 chr6A 80.000 120 9 9 1476 1581 101842731 101842613 1.810000e-09 75.0
21 TraesCS6B01G437200 chr6A 87.302 63 7 1 1468 1529 57731370 57731308 2.340000e-08 71.3
22 TraesCS6B01G437200 chr6A 97.436 39 1 0 3525 3563 608980636 608980674 3.030000e-07 67.6
23 TraesCS6B01G437200 chr5B 95.593 1021 38 4 3 1017 65769830 65770849 0.000000e+00 1629.0
24 TraesCS6B01G437200 chr5B 79.988 1659 286 29 1679 3301 65771575 65773223 0.000000e+00 1182.0
25 TraesCS6B01G437200 chr5B 80.413 1501 239 41 1717 3185 65588110 65586633 0.000000e+00 1092.0
26 TraesCS6B01G437200 chr5B 88.889 441 39 5 1037 1473 65770987 65771421 6.910000e-148 534.0
27 TraesCS6B01G437200 chr5B 92.353 170 13 0 1575 1744 65771426 65771595 4.690000e-60 243.0
28 TraesCS6B01G437200 chr5B 92.857 98 6 1 3990 4086 419246133 419246230 1.760000e-29 141.0
29 TraesCS6B01G437200 chr5B 85.849 106 7 5 1479 1581 572353100 572353200 6.420000e-19 106.0
30 TraesCS6B01G437200 chr5B 85.714 98 7 5 1477 1571 291385740 291385833 3.860000e-16 97.1
31 TraesCS6B01G437200 chr5B 83.158 95 13 3 1479 1573 375458458 375458549 3.010000e-12 84.2
32 TraesCS6B01G437200 chr6D 82.936 1594 229 25 1581 3138 461923973 461925559 0.000000e+00 1397.0
33 TraesCS6B01G437200 chr6D 81.191 1478 247 23 1717 3184 462014286 462012830 0.000000e+00 1160.0
34 TraesCS6B01G437200 chr6D 91.262 103 8 1 3985 4086 301786969 301787071 6.330000e-29 139.0
35 TraesCS6B01G437200 chr6D 89.815 108 8 3 3981 4086 388334529 388334635 8.190000e-28 135.0
36 TraesCS6B01G437200 chr6D 83.333 108 10 5 1476 1577 403657550 403657445 5.000000e-15 93.5
37 TraesCS6B01G437200 chr6D 82.727 110 5 4 1476 1571 90111147 90111256 8.360000e-13 86.1
38 TraesCS6B01G437200 chr6D 82.727 110 5 5 1479 1574 90111256 90111147 8.360000e-13 86.1
39 TraesCS6B01G437200 chr6D 81.982 111 6 7 1478 1574 115787726 115787616 1.080000e-11 82.4
40 TraesCS6B01G437200 chr6D 81.982 111 6 7 1475 1571 302113754 302113644 1.080000e-11 82.4
41 TraesCS6B01G437200 chr6D 81.308 107 6 8 1479 1571 391925985 391925879 1.810000e-09 75.0
42 TraesCS6B01G437200 chr6D 90.741 54 3 2 1538 1590 306429235 306429183 2.340000e-08 71.3
43 TraesCS6B01G437200 chr6D 86.667 60 5 3 1460 1517 384224307 384224249 3.920000e-06 63.9
44 TraesCS6B01G437200 chr6D 92.857 42 3 0 1476 1517 317078782 317078823 1.410000e-05 62.1
45 TraesCS6B01G437200 chr6D 92.308 39 3 0 1533 1571 384224249 384224287 6.560000e-04 56.5
46 TraesCS6B01G437200 chr2B 90.295 711 61 6 1 706 547099402 547100109 0.000000e+00 924.0
47 TraesCS6B01G437200 chr2B 95.087 346 16 1 4342 4686 653894436 653894781 1.150000e-150 544.0
48 TraesCS6B01G437200 chr1B 93.966 348 18 3 4342 4686 394894273 394894620 1.500000e-144 523.0
49 TraesCS6B01G437200 chr1B 94.169 343 19 1 4342 4683 188257537 188257879 5.380000e-144 521.0
50 TraesCS6B01G437200 chr1B 92.877 351 19 2 4342 4686 139086956 139086606 5.420000e-139 505.0
51 TraesCS6B01G437200 chr1B 92.837 349 21 2 4342 4686 573070558 573070210 1.950000e-138 503.0
52 TraesCS6B01G437200 chr1B 92.486 346 25 1 4342 4686 643824993 643824648 1.170000e-135 494.0
53 TraesCS6B01G437200 chr1B 93.814 97 4 2 3991 4086 544448275 544448180 1.360000e-30 145.0
54 TraesCS6B01G437200 chr1B 87.500 96 9 3 1479 1574 548194484 548194392 1.780000e-19 108.0
55 TraesCS6B01G437200 chr4B 92.593 351 20 2 4342 4686 518670754 518671104 2.520000e-137 499.0
56 TraesCS6B01G437200 chr4B 92.529 348 23 3 4342 4686 1177110 1177457 3.260000e-136 496.0
57 TraesCS6B01G437200 chr3B 92.529 348 23 3 4342 4686 225234215 225234562 3.260000e-136 496.0
58 TraesCS6B01G437200 chr3B 93.000 100 6 1 3988 4086 644147063 644147162 1.360000e-30 145.0
59 TraesCS6B01G437200 chr2D 88.235 221 26 0 27 247 277060090 277060310 1.000000e-66 265.0
60 TraesCS6B01G437200 chr2D 89.831 59 6 0 1473 1531 351973344 351973402 5.030000e-10 76.8
61 TraesCS6B01G437200 chr3D 93.000 100 6 1 3988 4086 561766939 561766840 1.360000e-30 145.0
62 TraesCS6B01G437200 chr3D 84.404 109 3 8 1477 1571 379826349 379826241 1.390000e-15 95.3
63 TraesCS6B01G437200 chr3D 80.000 115 9 8 1479 1579 536330683 536330569 6.510000e-09 73.1
64 TraesCS6B01G437200 chr4D 92.857 98 6 1 3990 4086 37496769 37496866 1.760000e-29 141.0
65 TraesCS6B01G437200 chr4D 86.111 108 13 1 1 106 18199276 18199169 1.070000e-21 115.0
66 TraesCS6B01G437200 chr4D 82.243 107 5 8 1479 1571 259497259 259497365 3.890000e-11 80.5
67 TraesCS6B01G437200 chr4D 80.328 122 9 9 1465 1571 259497380 259497259 1.400000e-10 78.7
68 TraesCS6B01G437200 chr4D 85.938 64 8 1 1476 1538 476868394 476868331 3.030000e-07 67.6
69 TraesCS6B01G437200 chrUn 92.000 100 7 1 3988 4086 92689063 92688964 6.330000e-29 139.0
70 TraesCS6B01G437200 chr7D 92.000 100 7 1 3988 4086 577245608 577245509 6.330000e-29 139.0
71 TraesCS6B01G437200 chr7D 95.349 43 2 0 1533 1575 412016504 412016462 8.420000e-08 69.4
72 TraesCS6B01G437200 chr7A 88.000 100 9 2 1474 1571 41045100 41045002 1.070000e-21 115.0
73 TraesCS6B01G437200 chr7A 85.849 106 6 6 1473 1572 41044995 41045097 2.310000e-18 104.0
74 TraesCS6B01G437200 chr5D 85.714 112 8 6 1476 1581 465001222 465001331 1.380000e-20 111.0
75 TraesCS6B01G437200 chr5D 86.408 103 8 4 1479 1575 465001323 465001221 1.780000e-19 108.0
76 TraesCS6B01G437200 chr5D 85.106 94 8 4 1477 1570 257131600 257131687 1.800000e-14 91.6
77 TraesCS6B01G437200 chr5D 97.436 39 0 1 1533 1571 113380419 113380382 1.090000e-06 65.8
78 TraesCS6B01G437200 chr5D 95.122 41 2 0 1538 1578 451792559 451792519 1.090000e-06 65.8
79 TraesCS6B01G437200 chr7B 86.139 101 8 4 1475 1575 426367836 426367742 2.310000e-18 104.0
80 TraesCS6B01G437200 chr1D 82.727 110 5 8 1476 1571 407673008 407673117 8.360000e-13 86.1
81 TraesCS6B01G437200 chr1D 91.667 48 3 1 1533 1580 68241963 68241917 1.090000e-06 65.8
82 TraesCS6B01G437200 chr1D 95.122 41 2 0 1479 1519 383762002 383762042 1.090000e-06 65.8
83 TraesCS6B01G437200 chr1D 100.000 29 0 0 1543 1571 87762505 87762477 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G437200 chr6B 704370677 704375366 4689 False 4095.500000 7546 100.000000 1 4690 2 chr6B.!!$F2 4689
1 TraesCS6B01G437200 chr6B 704187319 704188939 1620 False 1399.000000 1399 82.601000 1581 3184 1 chr6B.!!$F1 1603
2 TraesCS6B01G437200 chr6B 704176507 704177940 1433 True 1127.000000 1127 81.137000 1717 3134 1 chr6B.!!$R1 1417
3 TraesCS6B01G437200 chr6B 704182427 704183883 1456 True 1122.000000 1122 80.730000 1717 3184 1 chr6B.!!$R2 1467
4 TraesCS6B01G437200 chr6B 704438053 704439692 1639 False 484.333333 774 85.059000 863 2579 3 chr6B.!!$F3 1716
5 TraesCS6B01G437200 chr6A 608710054 608711631 1577 False 1402.000000 1402 83.081000 1581 3129 1 chr6A.!!$F1 1548
6 TraesCS6B01G437200 chr6A 608900830 608902287 1457 True 1118.000000 1118 80.845000 1717 3155 1 chr6A.!!$R3 1438
7 TraesCS6B01G437200 chr6A 608977585 608981077 3492 False 1052.320000 4578 94.686400 852 3991 5 chr6A.!!$F3 3139
8 TraesCS6B01G437200 chr6A 608967723 608968522 799 False 758.000000 758 83.770000 1581 2381 1 chr6A.!!$F2 800
9 TraesCS6B01G437200 chr6A 609002574 609004979 2405 False 658.666667 1192 84.229333 863 3301 3 chr6A.!!$F4 2438
10 TraesCS6B01G437200 chr5B 65586633 65588110 1477 True 1092.000000 1092 80.413000 1717 3185 1 chr5B.!!$R1 1468
11 TraesCS6B01G437200 chr5B 65769830 65773223 3393 False 897.000000 1629 89.205750 3 3301 4 chr5B.!!$F5 3298
12 TraesCS6B01G437200 chr6D 461923973 461925559 1586 False 1397.000000 1397 82.936000 1581 3138 1 chr6D.!!$F6 1557
13 TraesCS6B01G437200 chr6D 462012830 462014286 1456 True 1160.000000 1160 81.191000 1717 3184 1 chr6D.!!$R8 1467
14 TraesCS6B01G437200 chr2B 547099402 547100109 707 False 924.000000 924 90.295000 1 706 1 chr2B.!!$F1 705

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
387 389 0.179156 CATGCTTGGACAATCGCCAC 60.179 55.0 0.00 0.00 34.56 5.01 F
1303 1456 0.031111 TGGGAGTAGGGAGTGGGATG 60.031 60.0 0.00 0.00 0.00 3.51 F
1673 1830 0.756070 AGAGAAGCTAGTACCGGGGC 60.756 60.0 6.32 1.69 0.00 5.80 F
2693 2952 0.037046 CAACCAGAATGCCCCAAAGC 60.037 55.0 0.00 0.00 31.97 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1709 1866 1.134220 CGCTTAGCCTGTCCCCATTAA 60.134 52.381 0.00 0.0 0.00 1.40 R
2693 2952 2.559840 CAAGCACAGGAGCAAGCG 59.440 61.111 0.00 0.0 36.85 4.68 R
3594 3864 0.245539 TACCTCACCGCACTTACTGC 59.754 55.000 0.00 0.0 43.21 4.40 R
4523 5159 0.027455 TGAAAACTCGCGTGCAACTG 59.973 50.000 5.77 0.0 31.75 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
143 144 6.056236 ACGTGATAGCTACTCTGATGAACTA 58.944 40.000 0.00 0.00 0.00 2.24
293 295 2.062971 AGCGAATGCCTCCATGAATT 57.937 45.000 0.00 0.00 44.31 2.17
349 351 1.410517 ACATATGTCGGTGAGCTCTGG 59.589 52.381 16.19 4.10 0.00 3.86
358 360 1.367659 GTGAGCTCTGGCATCTTCAC 58.632 55.000 16.19 0.00 41.70 3.18
368 370 1.135721 GGCATCTTCACTTGGGATTGC 59.864 52.381 0.00 0.00 0.00 3.56
387 389 0.179156 CATGCTTGGACAATCGCCAC 60.179 55.000 0.00 0.00 34.56 5.01
402 404 2.499693 TCGCCACAGAAACATCCTGATA 59.500 45.455 0.00 0.00 35.69 2.15
494 496 2.353605 CGGTACCTTTTAACCACGCCTA 60.354 50.000 10.90 0.00 35.35 3.93
496 498 3.306989 GGTACCTTTTAACCACGCCTACT 60.307 47.826 4.06 0.00 35.73 2.57
507 511 4.453751 ACCACGCCTACTTTCTTGTTTTA 58.546 39.130 0.00 0.00 0.00 1.52
629 634 3.053019 TCCCAAGATAATTGGCACATCCA 60.053 43.478 0.95 0.00 44.85 3.41
807 816 6.763715 ATCCAGGCAGGTTATATTTAGTGA 57.236 37.500 0.00 0.00 39.02 3.41
915 929 0.180406 TTAGCCCGAGCCCAAATCTC 59.820 55.000 0.00 0.00 41.25 2.75
984 998 2.037128 TTTCCCCTCCCCACCCAA 60.037 61.111 0.00 0.00 0.00 4.12
1080 1228 8.163408 TGATGAAGGAAGGTCAAATTCTTTCTA 58.837 33.333 10.56 1.00 41.08 2.10
1133 1281 3.064207 CCAATTTCGTTCTGTCTTCGGA 58.936 45.455 0.00 0.00 0.00 4.55
1204 1352 7.168219 AGTTGTTTTTATATGTCTGCCTCTCA 58.832 34.615 0.00 0.00 0.00 3.27
1222 1370 8.535335 TGCCTCTCATGAGATAATAGTAAATCC 58.465 37.037 25.30 3.40 42.73 3.01
1261 1409 2.859165 ACCGGCTTGAAGAAGATTCA 57.141 45.000 0.00 0.00 0.00 2.57
1303 1456 0.031111 TGGGAGTAGGGAGTGGGATG 60.031 60.000 0.00 0.00 0.00 3.51
1523 1680 7.497595 ACTTGTCGCTCAAATGGATATTAGTA 58.502 34.615 0.00 0.00 35.48 1.82
1524 1681 7.653713 ACTTGTCGCTCAAATGGATATTAGTAG 59.346 37.037 0.00 0.00 35.48 2.57
1525 1682 5.926542 TGTCGCTCAAATGGATATTAGTAGC 59.073 40.000 0.00 0.00 0.00 3.58
1527 1684 5.926542 TCGCTCAAATGGATATTAGTAGCAC 59.073 40.000 0.00 0.00 31.21 4.40
1528 1685 5.928839 CGCTCAAATGGATATTAGTAGCACT 59.071 40.000 0.00 0.00 31.21 4.40
1529 1686 7.039993 TCGCTCAAATGGATATTAGTAGCACTA 60.040 37.037 0.00 0.00 31.21 2.74
1543 1700 8.833231 TTAGTAGCACTAATATCCATTTGAGC 57.167 34.615 5.10 0.00 35.89 4.26
1673 1830 0.756070 AGAGAAGCTAGTACCGGGGC 60.756 60.000 6.32 1.69 0.00 5.80
1709 1866 1.882623 GCCTGCTGAAGTACAAGCTTT 59.117 47.619 14.05 0.00 0.00 3.51
1864 2066 5.369685 GATCGTCATTGATCTCAGCTCTA 57.630 43.478 0.00 0.00 41.26 2.43
1893 2095 4.749245 AGTTCAAATGAATGGTGTCGTC 57.251 40.909 0.00 0.00 36.33 4.20
2083 2285 2.091994 CCAAGGGATCTCCATCTTTGCT 60.092 50.000 0.00 0.00 38.24 3.91
2287 2490 2.624838 GGGATCCGTTCGGTTCTACATA 59.375 50.000 17.79 0.00 0.00 2.29
2377 2580 1.247567 ACCAAAGCTCAAACGGATGG 58.752 50.000 0.00 0.00 0.00 3.51
2521 2727 4.669700 TGCTACTGTCCCTTCTGTTAGTA 58.330 43.478 0.00 0.00 0.00 1.82
2693 2952 0.037046 CAACCAGAATGCCCCAAAGC 60.037 55.000 0.00 0.00 31.97 3.51
2864 3123 7.441458 ACAGGAGTCACAAAATAGTTACTCAAC 59.559 37.037 9.72 0.00 41.99 3.18
2925 3184 0.322975 AGCACAAGAATCTGGCGACT 59.677 50.000 0.00 0.00 0.00 4.18
2940 3199 3.137533 GGCGACTCTAACTATCTACGGT 58.862 50.000 0.00 0.00 0.00 4.83
2976 3235 4.843728 ACAATTTCATGGGATACGTCAGT 58.156 39.130 0.00 0.00 37.60 3.41
3185 3447 1.544691 TCAGTTCAGCTCGTAAGGTCC 59.455 52.381 0.00 0.00 38.47 4.46
3307 3577 0.519077 GCTTTTCTGCTGAACCCGAG 59.481 55.000 5.41 3.73 31.02 4.63
3315 3585 1.166531 GCTGAACCCGAGCTTGTGTT 61.167 55.000 0.90 0.90 33.37 3.32
3416 3686 0.318955 GTGTCCATGTGCCTTGTTGC 60.319 55.000 0.00 0.00 0.00 4.17
3428 3698 2.804212 GCCTTGTTGCAAGTGCTCATTT 60.804 45.455 0.00 0.00 42.66 2.32
3589 3859 8.684386 TCAGGAACAAGTGTTTATGTTGAATA 57.316 30.769 0.00 0.00 39.73 1.75
3594 3864 8.555166 AACAAGTGTTTATGTTGAATAACGTG 57.445 30.769 0.00 0.00 38.29 4.49
3595 3865 6.635239 ACAAGTGTTTATGTTGAATAACGTGC 59.365 34.615 0.00 0.00 39.71 5.34
3596 3866 6.307031 AGTGTTTATGTTGAATAACGTGCA 57.693 33.333 0.00 0.00 39.71 4.57
3597 3867 6.370593 AGTGTTTATGTTGAATAACGTGCAG 58.629 36.000 0.00 0.00 39.71 4.41
3598 3868 6.017440 AGTGTTTATGTTGAATAACGTGCAGT 60.017 34.615 0.00 0.00 39.71 4.40
3599 3869 7.171848 AGTGTTTATGTTGAATAACGTGCAGTA 59.828 33.333 0.00 0.00 39.71 2.74
3600 3870 7.799447 GTGTTTATGTTGAATAACGTGCAGTAA 59.201 33.333 0.00 0.00 39.71 2.24
3601 3871 8.012809 TGTTTATGTTGAATAACGTGCAGTAAG 58.987 33.333 0.00 0.00 39.71 2.34
3602 3872 7.661127 TTATGTTGAATAACGTGCAGTAAGT 57.339 32.000 0.00 0.00 39.71 2.24
3603 3873 5.337219 TGTTGAATAACGTGCAGTAAGTG 57.663 39.130 0.00 0.00 39.71 3.16
3604 3874 4.319190 TGTTGAATAACGTGCAGTAAGTGC 60.319 41.667 0.00 0.00 45.28 4.40
3605 3875 7.514968 TGTTGAATAACGTGCAGTAAGTGCG 62.515 44.000 0.00 0.00 46.75 5.34
3611 3881 3.876300 GCAGTAAGTGCGGTGAGG 58.124 61.111 0.00 0.00 43.99 3.86
3614 3884 1.992170 CAGTAAGTGCGGTGAGGTAC 58.008 55.000 0.00 0.00 0.00 3.34
3615 3885 1.271379 CAGTAAGTGCGGTGAGGTACA 59.729 52.381 0.00 0.00 0.00 2.90
3616 3886 2.094182 CAGTAAGTGCGGTGAGGTACAT 60.094 50.000 0.00 0.00 0.00 2.29
3617 3887 2.094182 AGTAAGTGCGGTGAGGTACATG 60.094 50.000 0.00 0.00 0.00 3.21
3618 3888 0.673644 AAGTGCGGTGAGGTACATGC 60.674 55.000 0.00 0.00 34.73 4.06
3619 3889 1.375396 GTGCGGTGAGGTACATGCA 60.375 57.895 0.00 0.00 39.27 3.96
3620 3890 1.079197 TGCGGTGAGGTACATGCAG 60.079 57.895 0.00 0.00 37.65 4.41
3621 3891 1.079127 GCGGTGAGGTACATGCAGT 60.079 57.895 0.00 0.00 34.45 4.40
3622 3892 1.361668 GCGGTGAGGTACATGCAGTG 61.362 60.000 0.00 0.00 34.45 3.66
3623 3893 0.740868 CGGTGAGGTACATGCAGTGG 60.741 60.000 0.00 0.00 0.00 4.00
3624 3894 0.324943 GGTGAGGTACATGCAGTGGT 59.675 55.000 0.00 0.00 0.00 4.16
3625 3895 1.676014 GGTGAGGTACATGCAGTGGTC 60.676 57.143 0.00 0.00 0.00 4.02
3626 3896 0.613260 TGAGGTACATGCAGTGGTCC 59.387 55.000 0.00 0.00 0.00 4.46
3629 3899 0.739813 GGTACATGCAGTGGTCCGTC 60.740 60.000 0.00 0.00 0.00 4.79
3630 3900 0.739813 GTACATGCAGTGGTCCGTCC 60.740 60.000 0.00 0.00 0.00 4.79
3631 3901 1.895020 TACATGCAGTGGTCCGTCCC 61.895 60.000 0.00 0.00 34.77 4.46
3632 3902 2.607750 ATGCAGTGGTCCGTCCCT 60.608 61.111 0.00 0.00 34.77 4.20
3633 3903 2.959484 ATGCAGTGGTCCGTCCCTG 61.959 63.158 0.00 0.00 37.47 4.45
3635 3905 2.923035 CAGTGGTCCGTCCCTGGT 60.923 66.667 0.00 0.00 33.69 4.00
3636 3906 2.923035 AGTGGTCCGTCCCTGGTG 60.923 66.667 0.00 0.00 34.77 4.17
3637 3907 4.016706 GTGGTCCGTCCCTGGTGG 62.017 72.222 0.00 0.00 34.77 4.61
3638 3908 4.242586 TGGTCCGTCCCTGGTGGA 62.243 66.667 0.00 0.00 42.41 4.02
3645 3915 2.529136 TCCCTGGTGGACTGGTGG 60.529 66.667 0.00 0.00 38.61 4.61
3646 3916 4.351054 CCCTGGTGGACTGGTGGC 62.351 72.222 0.00 0.00 36.51 5.01
3648 3918 2.515398 CTGGTGGACTGGTGGCAA 59.485 61.111 0.00 0.00 0.00 4.52
3651 3921 1.600916 GGTGGACTGGTGGCAACTC 60.601 63.158 3.27 0.00 37.61 3.01
3662 3932 3.660111 GCAACTCCGGCGCAGTTT 61.660 61.111 14.54 0.00 31.40 2.66
3663 3933 2.252260 CAACTCCGGCGCAGTTTG 59.748 61.111 14.54 6.14 31.40 2.93
3664 3934 2.203153 AACTCCGGCGCAGTTTGT 60.203 55.556 11.03 0.14 29.29 2.83
3665 3935 2.542907 AACTCCGGCGCAGTTTGTG 61.543 57.895 11.03 0.00 29.29 3.33
3718 4307 2.279851 TGACGTTGTGGTGCTCGG 60.280 61.111 0.00 0.00 0.00 4.63
3728 4317 3.869272 GTGCTCGGCGCTCCATTG 61.869 66.667 7.64 0.00 40.11 2.82
3731 4320 2.436646 CTCGGCGCTCCATTGGTT 60.437 61.111 7.64 0.00 0.00 3.67
3754 4345 5.239351 TGGAGAAATTTGCAACAATGGATG 58.761 37.500 0.00 0.00 0.00 3.51
3808 4399 6.597562 TGTTCCTTATTTGGCCGACTATAAT 58.402 36.000 0.00 0.00 0.00 1.28
3857 4492 6.825944 TGCTATGGTTTTGTTGTTAGCATA 57.174 33.333 0.00 0.00 37.66 3.14
3858 4493 6.851609 TGCTATGGTTTTGTTGTTAGCATAG 58.148 36.000 13.35 13.35 45.89 2.23
3880 4516 6.323203 AGAAATAATTTGCCTGATCCGATG 57.677 37.500 0.00 0.00 0.00 3.84
3883 4519 1.315690 ATTTGCCTGATCCGATGCTG 58.684 50.000 0.00 0.00 0.00 4.41
3902 4538 4.011966 CTGGATGAGCATATTAGTGGCA 57.988 45.455 0.00 0.00 0.00 4.92
3903 4539 4.586884 CTGGATGAGCATATTAGTGGCAT 58.413 43.478 0.00 0.00 0.00 4.40
3904 4540 5.737860 CTGGATGAGCATATTAGTGGCATA 58.262 41.667 0.00 0.00 0.00 3.14
3923 4559 9.037737 GTGGCATATACTCGTACTTATTTTTCA 57.962 33.333 0.00 0.00 0.00 2.69
3947 4583 2.047830 AGTAGAATAAGGGCCCCTTCG 58.952 52.381 20.95 0.00 43.57 3.79
3991 4627 5.107913 CGTTACAAAATCCGAACACGTTAGA 60.108 40.000 0.00 0.00 0.00 2.10
3992 4628 4.985044 ACAAAATCCGAACACGTTAGAG 57.015 40.909 0.00 0.00 0.00 2.43
3993 4629 3.185797 ACAAAATCCGAACACGTTAGAGC 59.814 43.478 0.00 0.00 0.00 4.09
3994 4630 2.736144 AATCCGAACACGTTAGAGCA 57.264 45.000 0.00 0.00 0.00 4.26
3995 4631 2.736144 ATCCGAACACGTTAGAGCAA 57.264 45.000 0.00 0.00 0.00 3.91
3996 4632 1.774639 TCCGAACACGTTAGAGCAAC 58.225 50.000 0.00 0.00 0.00 4.17
3997 4633 1.338973 TCCGAACACGTTAGAGCAACT 59.661 47.619 0.00 0.00 34.77 3.16
3998 4634 2.132762 CCGAACACGTTAGAGCAACTT 58.867 47.619 0.00 0.00 34.77 2.66
3999 4635 2.155155 CCGAACACGTTAGAGCAACTTC 59.845 50.000 0.00 0.00 34.77 3.01
4000 4636 2.792674 CGAACACGTTAGAGCAACTTCA 59.207 45.455 0.00 0.00 34.77 3.02
4001 4637 3.244345 CGAACACGTTAGAGCAACTTCAA 59.756 43.478 0.00 0.00 34.77 2.69
4002 4638 4.084537 CGAACACGTTAGAGCAACTTCAAT 60.085 41.667 0.00 0.00 34.77 2.57
4003 4639 4.732285 ACACGTTAGAGCAACTTCAATG 57.268 40.909 0.00 0.00 34.77 2.82
4004 4640 3.498397 ACACGTTAGAGCAACTTCAATGG 59.502 43.478 0.00 0.00 34.77 3.16
4005 4641 3.074412 ACGTTAGAGCAACTTCAATGGG 58.926 45.455 0.00 0.00 34.77 4.00
4006 4642 2.420022 CGTTAGAGCAACTTCAATGGGG 59.580 50.000 0.00 0.00 34.77 4.96
4007 4643 2.128771 TAGAGCAACTTCAATGGGGC 57.871 50.000 0.00 0.00 0.00 5.80
4008 4644 0.962356 AGAGCAACTTCAATGGGGCG 60.962 55.000 0.00 0.00 0.00 6.13
4009 4645 0.960364 GAGCAACTTCAATGGGGCGA 60.960 55.000 0.00 0.00 0.00 5.54
4010 4646 1.212751 GCAACTTCAATGGGGCGAC 59.787 57.895 0.00 0.00 0.00 5.19
4025 4661 4.668118 GACCCAAACGGACGGCGA 62.668 66.667 16.62 0.00 34.64 5.54
4026 4662 3.945304 GACCCAAACGGACGGCGAT 62.945 63.158 16.62 0.00 34.64 4.58
4027 4663 2.744709 CCCAAACGGACGGCGATT 60.745 61.111 16.62 0.00 0.00 3.34
4028 4664 2.329614 CCCAAACGGACGGCGATTT 61.330 57.895 16.62 5.62 0.00 2.17
4029 4665 1.133869 CCAAACGGACGGCGATTTC 59.866 57.895 16.62 0.00 0.00 2.17
4030 4666 1.225637 CAAACGGACGGCGATTTCG 60.226 57.895 16.62 13.70 43.27 3.46
4031 4667 1.665599 AAACGGACGGCGATTTCGT 60.666 52.632 16.62 14.37 44.03 3.85
4036 4672 4.609995 ACGGCGATTTCGTCCATT 57.390 50.000 16.62 0.00 41.58 3.16
4037 4673 2.849081 ACGGCGATTTCGTCCATTT 58.151 47.368 16.62 0.00 41.58 2.32
4038 4674 1.161843 ACGGCGATTTCGTCCATTTT 58.838 45.000 16.62 0.00 41.58 1.82
4039 4675 1.538075 ACGGCGATTTCGTCCATTTTT 59.462 42.857 16.62 0.00 41.58 1.94
4056 4692 1.166989 TTTTATCCGTTTGGGTCGGC 58.833 50.000 0.00 0.00 46.49 5.54
4057 4693 0.677414 TTTATCCGTTTGGGTCGGCC 60.677 55.000 0.00 0.00 46.49 6.13
4058 4694 2.855880 TTATCCGTTTGGGTCGGCCG 62.856 60.000 22.12 22.12 46.49 6.13
4084 4720 4.954933 GCATCCGCCCTGTTTAGA 57.045 55.556 0.00 0.00 0.00 2.10
4085 4721 3.403936 GCATCCGCCCTGTTTAGAT 57.596 52.632 0.00 0.00 0.00 1.98
4391 5027 8.474006 AATTGTTTTGGACCGAATAAAATAGC 57.526 30.769 0.00 0.00 0.00 2.97
4392 5028 6.576662 TGTTTTGGACCGAATAAAATAGCA 57.423 33.333 0.00 0.00 0.00 3.49
4393 5029 7.164230 TGTTTTGGACCGAATAAAATAGCAT 57.836 32.000 0.00 0.00 0.00 3.79
4394 5030 8.282455 TGTTTTGGACCGAATAAAATAGCATA 57.718 30.769 0.00 0.00 0.00 3.14
4395 5031 8.402472 TGTTTTGGACCGAATAAAATAGCATAG 58.598 33.333 0.00 0.00 0.00 2.23
4396 5032 8.403236 GTTTTGGACCGAATAAAATAGCATAGT 58.597 33.333 0.00 0.00 0.00 2.12
4397 5033 8.514330 TTTGGACCGAATAAAATAGCATAGTT 57.486 30.769 0.00 0.00 0.00 2.24
4398 5034 8.514330 TTGGACCGAATAAAATAGCATAGTTT 57.486 30.769 0.00 0.00 42.08 2.66
4399 5035 9.616156 TTGGACCGAATAAAATAGCATAGTTTA 57.384 29.630 0.00 0.00 43.93 2.01
4414 5050 8.066612 AGCATAGTTTATTACAAGCCAAATGT 57.933 30.769 0.00 0.00 34.81 2.71
4415 5051 9.184523 AGCATAGTTTATTACAAGCCAAATGTA 57.815 29.630 0.00 0.00 32.27 2.29
4416 5052 9.796120 GCATAGTTTATTACAAGCCAAATGTAA 57.204 29.630 2.03 2.03 44.69 2.41
4427 5063 8.601845 ACAAGCCAAATGTAAATAAAAAGGTC 57.398 30.769 0.00 0.00 0.00 3.85
4428 5064 8.428852 ACAAGCCAAATGTAAATAAAAAGGTCT 58.571 29.630 0.00 0.00 0.00 3.85
4429 5065 9.271828 CAAGCCAAATGTAAATAAAAAGGTCTT 57.728 29.630 0.00 0.00 0.00 3.01
4431 5067 9.923143 AGCCAAATGTAAATAAAAAGGTCTTAC 57.077 29.630 0.00 0.00 0.00 2.34
4432 5068 9.699703 GCCAAATGTAAATAAAAAGGTCTTACA 57.300 29.630 0.00 0.00 37.01 2.41
4441 5077 9.959721 AAATAAAAAGGTCTTACATAGCTCTCA 57.040 29.630 0.00 0.00 0.00 3.27
4442 5078 8.950208 ATAAAAAGGTCTTACATAGCTCTCAC 57.050 34.615 0.00 0.00 0.00 3.51
4443 5079 6.360370 AAAAGGTCTTACATAGCTCTCACA 57.640 37.500 0.00 0.00 0.00 3.58
4444 5080 6.552445 AAAGGTCTTACATAGCTCTCACAT 57.448 37.500 0.00 0.00 0.00 3.21
4445 5081 7.661536 AAAGGTCTTACATAGCTCTCACATA 57.338 36.000 0.00 0.00 0.00 2.29
4446 5082 6.892658 AGGTCTTACATAGCTCTCACATAG 57.107 41.667 0.00 0.00 0.00 2.23
4447 5083 6.369629 AGGTCTTACATAGCTCTCACATAGT 58.630 40.000 0.00 0.00 0.00 2.12
4448 5084 6.836527 AGGTCTTACATAGCTCTCACATAGTT 59.163 38.462 0.00 0.00 0.00 2.24
4449 5085 7.343316 AGGTCTTACATAGCTCTCACATAGTTT 59.657 37.037 0.00 0.00 0.00 2.66
4450 5086 7.982354 GGTCTTACATAGCTCTCACATAGTTTT 59.018 37.037 0.00 0.00 0.00 2.43
4451 5087 8.812329 GTCTTACATAGCTCTCACATAGTTTTG 58.188 37.037 0.00 0.00 0.00 2.44
4452 5088 7.492669 TCTTACATAGCTCTCACATAGTTTTGC 59.507 37.037 0.00 0.00 0.00 3.68
4453 5089 5.491070 ACATAGCTCTCACATAGTTTTGCA 58.509 37.500 0.00 0.00 0.00 4.08
4454 5090 5.939883 ACATAGCTCTCACATAGTTTTGCAA 59.060 36.000 0.00 0.00 0.00 4.08
4455 5091 6.430925 ACATAGCTCTCACATAGTTTTGCAAA 59.569 34.615 8.05 8.05 0.00 3.68
4456 5092 5.972107 AGCTCTCACATAGTTTTGCAAAT 57.028 34.783 13.65 1.10 0.00 2.32
4457 5093 5.706916 AGCTCTCACATAGTTTTGCAAATG 58.293 37.500 13.65 10.72 0.00 2.32
4458 5094 5.474532 AGCTCTCACATAGTTTTGCAAATGA 59.525 36.000 13.65 11.33 0.00 2.57
4459 5095 6.016024 AGCTCTCACATAGTTTTGCAAATGAA 60.016 34.615 13.65 1.45 0.00 2.57
4460 5096 6.810182 GCTCTCACATAGTTTTGCAAATGAAT 59.190 34.615 13.65 0.44 0.00 2.57
4461 5097 7.970061 GCTCTCACATAGTTTTGCAAATGAATA 59.030 33.333 13.65 2.99 0.00 1.75
4462 5098 9.844790 CTCTCACATAGTTTTGCAAATGAATAA 57.155 29.630 13.65 0.00 0.00 1.40
4486 5122 7.573968 AAAGAAGATACATCTATTGGTTGCC 57.426 36.000 0.00 0.00 35.76 4.52
4487 5123 6.252599 AGAAGATACATCTATTGGTTGCCA 57.747 37.500 0.00 0.00 35.76 4.92
4488 5124 6.662755 AGAAGATACATCTATTGGTTGCCAA 58.337 36.000 2.86 2.86 41.26 4.52
4489 5125 6.543831 AGAAGATACATCTATTGGTTGCCAAC 59.456 38.462 0.00 0.00 40.42 3.77
4490 5126 5.754782 AGATACATCTATTGGTTGCCAACA 58.245 37.500 10.18 0.00 46.95 3.33
4491 5127 6.367983 AGATACATCTATTGGTTGCCAACAT 58.632 36.000 10.18 0.00 46.95 2.71
4492 5128 4.724074 ACATCTATTGGTTGCCAACATG 57.276 40.909 10.18 5.90 46.95 3.21
4493 5129 4.343231 ACATCTATTGGTTGCCAACATGA 58.657 39.130 10.18 10.44 46.95 3.07
4494 5130 4.400251 ACATCTATTGGTTGCCAACATGAG 59.600 41.667 10.18 1.21 46.95 2.90
4495 5131 2.754552 TCTATTGGTTGCCAACATGAGC 59.245 45.455 10.18 0.00 46.95 4.26
4496 5132 0.609662 ATTGGTTGCCAACATGAGCC 59.390 50.000 10.18 0.00 46.95 4.70
4497 5133 1.470996 TTGGTTGCCAACATGAGCCC 61.471 55.000 10.18 0.00 38.75 5.19
4498 5134 1.907807 GGTTGCCAACATGAGCCCA 60.908 57.895 10.18 0.00 0.00 5.36
4499 5135 1.290009 GTTGCCAACATGAGCCCAC 59.710 57.895 1.91 0.00 0.00 4.61
4500 5136 1.152589 TTGCCAACATGAGCCCACA 60.153 52.632 0.00 0.00 0.00 4.17
4501 5137 0.542467 TTGCCAACATGAGCCCACAT 60.542 50.000 0.00 0.00 0.00 3.21
4502 5138 0.330941 TGCCAACATGAGCCCACATA 59.669 50.000 0.00 0.00 0.00 2.29
4503 5139 1.063792 TGCCAACATGAGCCCACATAT 60.064 47.619 0.00 0.00 0.00 1.78
4504 5140 2.174424 TGCCAACATGAGCCCACATATA 59.826 45.455 0.00 0.00 0.00 0.86
4505 5141 2.554032 GCCAACATGAGCCCACATATAC 59.446 50.000 0.00 0.00 0.00 1.47
4506 5142 3.748668 GCCAACATGAGCCCACATATACT 60.749 47.826 0.00 0.00 0.00 2.12
4507 5143 4.067896 CCAACATGAGCCCACATATACTC 58.932 47.826 0.00 0.00 0.00 2.59
4508 5144 4.444733 CCAACATGAGCCCACATATACTCA 60.445 45.833 0.00 0.00 42.89 3.41
4509 5145 5.125356 CAACATGAGCCCACATATACTCAA 58.875 41.667 0.00 0.00 42.08 3.02
4510 5146 4.708177 ACATGAGCCCACATATACTCAAC 58.292 43.478 0.00 0.00 42.08 3.18
4511 5147 3.838244 TGAGCCCACATATACTCAACC 57.162 47.619 0.00 0.00 36.27 3.77
4512 5148 3.111484 TGAGCCCACATATACTCAACCA 58.889 45.455 0.00 0.00 36.27 3.67
4513 5149 3.521531 TGAGCCCACATATACTCAACCAA 59.478 43.478 0.00 0.00 36.27 3.67
4514 5150 4.018870 TGAGCCCACATATACTCAACCAAA 60.019 41.667 0.00 0.00 36.27 3.28
4515 5151 5.129368 AGCCCACATATACTCAACCAAAT 57.871 39.130 0.00 0.00 0.00 2.32
4516 5152 5.133221 AGCCCACATATACTCAACCAAATC 58.867 41.667 0.00 0.00 0.00 2.17
4517 5153 4.887071 GCCCACATATACTCAACCAAATCA 59.113 41.667 0.00 0.00 0.00 2.57
4518 5154 5.536161 GCCCACATATACTCAACCAAATCAT 59.464 40.000 0.00 0.00 0.00 2.45
4519 5155 6.040842 GCCCACATATACTCAACCAAATCATT 59.959 38.462 0.00 0.00 0.00 2.57
4520 5156 7.417797 GCCCACATATACTCAACCAAATCATTT 60.418 37.037 0.00 0.00 0.00 2.32
4521 5157 8.477256 CCCACATATACTCAACCAAATCATTTT 58.523 33.333 0.00 0.00 0.00 1.82
4522 5158 9.304731 CCACATATACTCAACCAAATCATTTTG 57.695 33.333 0.00 0.00 41.59 2.44
4523 5159 8.810427 CACATATACTCAACCAAATCATTTTGC 58.190 33.333 0.00 0.00 40.77 3.68
4524 5160 8.530311 ACATATACTCAACCAAATCATTTTGCA 58.470 29.630 0.00 0.00 40.77 4.08
4525 5161 9.027129 CATATACTCAACCAAATCATTTTGCAG 57.973 33.333 0.00 0.00 40.77 4.41
4526 5162 5.280654 ACTCAACCAAATCATTTTGCAGT 57.719 34.783 0.00 0.00 40.77 4.40
4527 5163 5.673514 ACTCAACCAAATCATTTTGCAGTT 58.326 33.333 0.00 0.00 40.77 3.16
4528 5164 5.524646 ACTCAACCAAATCATTTTGCAGTTG 59.475 36.000 11.23 11.23 41.43 3.16
4529 5165 4.272991 TCAACCAAATCATTTTGCAGTTGC 59.727 37.500 12.05 0.00 40.72 4.17
4539 5175 2.327940 GCAGTTGCACGCGAGTTT 59.672 55.556 15.93 0.00 46.40 2.66
4540 5176 1.298339 GCAGTTGCACGCGAGTTTT 60.298 52.632 15.93 0.00 46.40 2.43
4541 5177 1.262166 GCAGTTGCACGCGAGTTTTC 61.262 55.000 15.93 0.00 46.40 2.29
4542 5178 0.027455 CAGTTGCACGCGAGTTTTCA 59.973 50.000 15.93 0.00 46.40 2.69
4543 5179 0.730265 AGTTGCACGCGAGTTTTCAA 59.270 45.000 15.93 1.02 46.40 2.69
4544 5180 1.333619 AGTTGCACGCGAGTTTTCAAT 59.666 42.857 15.93 0.00 46.40 2.57
4545 5181 1.708680 GTTGCACGCGAGTTTTCAATC 59.291 47.619 15.93 0.00 46.40 2.67
4546 5182 0.940833 TGCACGCGAGTTTTCAATCA 59.059 45.000 15.93 0.00 46.40 2.57
4547 5183 1.318251 GCACGCGAGTTTTCAATCAC 58.682 50.000 15.93 0.00 46.40 3.06
4548 5184 1.580439 CACGCGAGTTTTCAATCACG 58.420 50.000 15.93 0.00 46.40 4.35
4549 5185 0.110823 ACGCGAGTTTTCAATCACGC 60.111 50.000 15.93 0.00 46.40 5.34
4550 5186 0.110867 CGCGAGTTTTCAATCACGCA 60.111 50.000 0.00 0.00 44.96 5.24
4551 5187 1.464023 CGCGAGTTTTCAATCACGCAT 60.464 47.619 0.00 0.00 44.96 4.73
4552 5188 1.906966 GCGAGTTTTCAATCACGCATG 59.093 47.619 0.00 0.00 44.29 4.06
4553 5189 2.665519 GCGAGTTTTCAATCACGCATGT 60.666 45.455 0.00 0.00 44.29 3.21
4555 5191 3.606846 CGAGTTTTCAATCACGCATGTGT 60.607 43.478 5.96 5.96 46.49 3.72
4556 5192 4.290155 GAGTTTTCAATCACGCATGTGTT 58.710 39.130 9.73 0.00 46.49 3.32
4557 5193 4.043750 AGTTTTCAATCACGCATGTGTTG 58.956 39.130 9.73 6.19 46.49 3.33
4558 5194 3.978718 TTTCAATCACGCATGTGTTGA 57.021 38.095 9.73 8.67 46.49 3.18
4559 5195 4.502171 TTTCAATCACGCATGTGTTGAT 57.498 36.364 9.73 12.87 46.49 2.57
4560 5196 3.474693 TCAATCACGCATGTGTTGATG 57.525 42.857 9.73 8.76 46.49 3.07
4561 5197 3.072944 TCAATCACGCATGTGTTGATGA 58.927 40.909 9.73 10.93 46.49 2.92
4562 5198 3.501445 TCAATCACGCATGTGTTGATGAA 59.499 39.130 9.73 5.92 46.49 2.57
4563 5199 4.023365 TCAATCACGCATGTGTTGATGAAA 60.023 37.500 9.73 3.82 46.49 2.69
4564 5200 4.707030 ATCACGCATGTGTTGATGAAAT 57.293 36.364 9.73 0.00 46.49 2.17
4565 5201 4.502171 TCACGCATGTGTTGATGAAATT 57.498 36.364 9.73 0.00 46.49 1.82
4566 5202 4.228317 TCACGCATGTGTTGATGAAATTG 58.772 39.130 9.73 0.00 46.49 2.32
4567 5203 3.365520 CACGCATGTGTTGATGAAATTGG 59.634 43.478 9.73 0.00 41.34 3.16
4568 5204 3.255395 ACGCATGTGTTGATGAAATTGGA 59.745 39.130 5.96 0.00 0.00 3.53
4569 5205 4.082081 ACGCATGTGTTGATGAAATTGGAT 60.082 37.500 5.96 0.00 0.00 3.41
4570 5206 4.266739 CGCATGTGTTGATGAAATTGGATG 59.733 41.667 0.00 0.00 0.00 3.51
4571 5207 5.412640 GCATGTGTTGATGAAATTGGATGA 58.587 37.500 0.00 0.00 0.00 2.92
4572 5208 6.046593 GCATGTGTTGATGAAATTGGATGAT 58.953 36.000 0.00 0.00 0.00 2.45
4573 5209 6.200286 GCATGTGTTGATGAAATTGGATGATC 59.800 38.462 0.00 0.00 0.00 2.92
4574 5210 7.489160 CATGTGTTGATGAAATTGGATGATCT 58.511 34.615 0.00 0.00 0.00 2.75
4575 5211 6.859017 TGTGTTGATGAAATTGGATGATCTG 58.141 36.000 0.00 0.00 0.00 2.90
4576 5212 6.434965 TGTGTTGATGAAATTGGATGATCTGT 59.565 34.615 0.00 0.00 0.00 3.41
4577 5213 7.039574 TGTGTTGATGAAATTGGATGATCTGTT 60.040 33.333 0.00 0.00 0.00 3.16
4578 5214 7.487189 GTGTTGATGAAATTGGATGATCTGTTC 59.513 37.037 0.00 0.00 0.00 3.18
4579 5215 7.177041 TGTTGATGAAATTGGATGATCTGTTCA 59.823 33.333 0.00 0.00 39.12 3.18
4580 5216 7.706100 TGATGAAATTGGATGATCTGTTCAA 57.294 32.000 0.00 0.00 38.03 2.69
4581 5217 8.124808 TGATGAAATTGGATGATCTGTTCAAA 57.875 30.769 0.00 0.00 38.03 2.69
4582 5218 8.030692 TGATGAAATTGGATGATCTGTTCAAAC 58.969 33.333 0.00 0.00 38.03 2.93
4583 5219 7.287512 TGAAATTGGATGATCTGTTCAAACA 57.712 32.000 0.00 0.00 38.03 2.83
4584 5220 7.898918 TGAAATTGGATGATCTGTTCAAACAT 58.101 30.769 0.00 0.00 38.03 2.71
4585 5221 8.369424 TGAAATTGGATGATCTGTTCAAACATT 58.631 29.630 0.00 0.00 38.03 2.71
4586 5222 8.542497 AAATTGGATGATCTGTTCAAACATTG 57.458 30.769 0.00 0.00 38.03 2.82
4587 5223 5.063180 TGGATGATCTGTTCAAACATTGC 57.937 39.130 0.00 0.00 38.03 3.56
4588 5224 4.082081 TGGATGATCTGTTCAAACATTGCC 60.082 41.667 0.00 0.00 38.03 4.52
4589 5225 3.557577 TGATCTGTTCAAACATTGCCG 57.442 42.857 0.00 0.00 38.41 5.69
4590 5226 2.253603 GATCTGTTCAAACATTGCCGC 58.746 47.619 0.00 0.00 38.41 6.53
4591 5227 1.317613 TCTGTTCAAACATTGCCGCT 58.682 45.000 0.00 0.00 38.41 5.52
4592 5228 2.499197 TCTGTTCAAACATTGCCGCTA 58.501 42.857 0.00 0.00 38.41 4.26
4593 5229 2.225491 TCTGTTCAAACATTGCCGCTAC 59.775 45.455 0.00 0.00 38.41 3.58
4594 5230 2.226330 TGTTCAAACATTGCCGCTACT 58.774 42.857 0.00 0.00 33.17 2.57
4595 5231 2.225491 TGTTCAAACATTGCCGCTACTC 59.775 45.455 0.00 0.00 33.17 2.59
4596 5232 1.448985 TCAAACATTGCCGCTACTCC 58.551 50.000 0.00 0.00 0.00 3.85
4597 5233 1.164411 CAAACATTGCCGCTACTCCA 58.836 50.000 0.00 0.00 0.00 3.86
4598 5234 1.745087 CAAACATTGCCGCTACTCCAT 59.255 47.619 0.00 0.00 0.00 3.41
4599 5235 1.382522 AACATTGCCGCTACTCCATG 58.617 50.000 0.00 0.00 0.00 3.66
4600 5236 1.097547 ACATTGCCGCTACTCCATGC 61.098 55.000 0.00 0.00 0.00 4.06
4601 5237 0.816825 CATTGCCGCTACTCCATGCT 60.817 55.000 0.00 0.00 0.00 3.79
4602 5238 0.533755 ATTGCCGCTACTCCATGCTC 60.534 55.000 0.00 0.00 0.00 4.26
4603 5239 1.898330 TTGCCGCTACTCCATGCTCA 61.898 55.000 0.00 0.00 0.00 4.26
4604 5240 1.593750 GCCGCTACTCCATGCTCAG 60.594 63.158 0.00 0.00 0.00 3.35
4605 5241 1.068753 CCGCTACTCCATGCTCAGG 59.931 63.158 0.00 0.00 0.00 3.86
4606 5242 1.593750 CGCTACTCCATGCTCAGGC 60.594 63.158 0.00 0.00 39.26 4.85
4616 5252 3.731716 TGCTCAGGCACAACATTCT 57.268 47.368 0.00 0.00 44.28 2.40
4617 5253 1.527034 TGCTCAGGCACAACATTCTC 58.473 50.000 0.00 0.00 44.28 2.87
4618 5254 1.202794 TGCTCAGGCACAACATTCTCA 60.203 47.619 0.00 0.00 44.28 3.27
4619 5255 1.198637 GCTCAGGCACAACATTCTCAC 59.801 52.381 0.00 0.00 38.54 3.51
4620 5256 1.808945 CTCAGGCACAACATTCTCACC 59.191 52.381 0.00 0.00 0.00 4.02
4621 5257 0.883833 CAGGCACAACATTCTCACCC 59.116 55.000 0.00 0.00 0.00 4.61
4622 5258 0.478072 AGGCACAACATTCTCACCCA 59.522 50.000 0.00 0.00 0.00 4.51
4623 5259 0.883833 GGCACAACATTCTCACCCAG 59.116 55.000 0.00 0.00 0.00 4.45
4624 5260 1.545428 GGCACAACATTCTCACCCAGA 60.545 52.381 0.00 0.00 0.00 3.86
4625 5261 2.229792 GCACAACATTCTCACCCAGAA 58.770 47.619 0.00 0.00 45.60 3.02
4626 5262 2.622942 GCACAACATTCTCACCCAGAAA 59.377 45.455 0.00 0.00 44.66 2.52
4627 5263 3.550842 GCACAACATTCTCACCCAGAAAC 60.551 47.826 0.00 0.00 44.66 2.78
4628 5264 3.885297 CACAACATTCTCACCCAGAAACT 59.115 43.478 0.00 0.00 44.66 2.66
4629 5265 3.885297 ACAACATTCTCACCCAGAAACTG 59.115 43.478 0.00 0.00 44.66 3.16
4630 5266 4.136796 CAACATTCTCACCCAGAAACTGA 58.863 43.478 0.00 0.00 44.66 3.41
4631 5267 4.437682 ACATTCTCACCCAGAAACTGAA 57.562 40.909 0.00 0.00 44.66 3.02
4632 5268 4.792068 ACATTCTCACCCAGAAACTGAAA 58.208 39.130 0.00 0.00 44.66 2.69
4633 5269 4.580580 ACATTCTCACCCAGAAACTGAAAC 59.419 41.667 0.00 0.00 44.66 2.78
4634 5270 3.208747 TCTCACCCAGAAACTGAAACC 57.791 47.619 0.00 0.00 32.44 3.27
4635 5271 2.158667 TCTCACCCAGAAACTGAAACCC 60.159 50.000 0.00 0.00 32.44 4.11
4636 5272 1.850345 TCACCCAGAAACTGAAACCCT 59.150 47.619 0.00 0.00 32.44 4.34
4637 5273 2.243736 TCACCCAGAAACTGAAACCCTT 59.756 45.455 0.00 0.00 32.44 3.95
4638 5274 2.362077 CACCCAGAAACTGAAACCCTTG 59.638 50.000 0.00 0.00 32.44 3.61
4639 5275 2.243736 ACCCAGAAACTGAAACCCTTGA 59.756 45.455 0.00 0.00 32.44 3.02
4640 5276 3.117131 ACCCAGAAACTGAAACCCTTGAT 60.117 43.478 0.00 0.00 32.44 2.57
4641 5277 3.507622 CCCAGAAACTGAAACCCTTGATC 59.492 47.826 0.00 0.00 32.44 2.92
4642 5278 4.144297 CCAGAAACTGAAACCCTTGATCA 58.856 43.478 0.00 0.00 32.44 2.92
4643 5279 4.768968 CCAGAAACTGAAACCCTTGATCAT 59.231 41.667 0.00 0.00 32.44 2.45
4644 5280 5.945784 CCAGAAACTGAAACCCTTGATCATA 59.054 40.000 0.00 0.00 32.44 2.15
4645 5281 6.127897 CCAGAAACTGAAACCCTTGATCATAC 60.128 42.308 0.00 0.00 32.44 2.39
4646 5282 6.430925 CAGAAACTGAAACCCTTGATCATACA 59.569 38.462 0.00 0.00 32.44 2.29
4647 5283 6.656693 AGAAACTGAAACCCTTGATCATACAG 59.343 38.462 0.00 0.00 0.00 2.74
4648 5284 5.762179 ACTGAAACCCTTGATCATACAGA 57.238 39.130 0.00 0.00 0.00 3.41
4649 5285 5.491982 ACTGAAACCCTTGATCATACAGAC 58.508 41.667 0.00 0.00 0.00 3.51
4650 5286 5.013079 ACTGAAACCCTTGATCATACAGACA 59.987 40.000 0.00 0.00 0.00 3.41
4651 5287 6.065976 TGAAACCCTTGATCATACAGACAT 57.934 37.500 0.00 0.00 0.00 3.06
4652 5288 6.484288 TGAAACCCTTGATCATACAGACATT 58.516 36.000 0.00 0.00 0.00 2.71
4653 5289 6.599244 TGAAACCCTTGATCATACAGACATTC 59.401 38.462 0.00 0.00 0.00 2.67
4654 5290 5.041191 ACCCTTGATCATACAGACATTCC 57.959 43.478 0.00 0.00 0.00 3.01
4655 5291 4.060900 CCCTTGATCATACAGACATTCCG 58.939 47.826 0.00 0.00 0.00 4.30
4656 5292 4.060900 CCTTGATCATACAGACATTCCGG 58.939 47.826 0.00 0.00 0.00 5.14
4657 5293 3.751479 TGATCATACAGACATTCCGGG 57.249 47.619 0.00 0.00 0.00 5.73
4658 5294 2.224281 TGATCATACAGACATTCCGGGC 60.224 50.000 0.00 0.00 0.00 6.13
4659 5295 0.104120 TCATACAGACATTCCGGGCG 59.896 55.000 0.00 0.00 0.00 6.13
4660 5296 1.227556 ATACAGACATTCCGGGCGC 60.228 57.895 0.00 0.00 0.00 6.53
4661 5297 1.686325 ATACAGACATTCCGGGCGCT 61.686 55.000 7.64 0.00 0.00 5.92
4662 5298 2.292794 TACAGACATTCCGGGCGCTC 62.293 60.000 7.64 0.06 0.00 5.03
4663 5299 4.514577 AGACATTCCGGGCGCTCG 62.515 66.667 25.85 25.85 0.00 5.03
4664 5300 4.814294 GACATTCCGGGCGCTCGT 62.814 66.667 30.18 9.70 0.00 4.18
4665 5301 4.814294 ACATTCCGGGCGCTCGTC 62.814 66.667 30.18 0.00 0.00 4.20
4666 5302 4.514577 CATTCCGGGCGCTCGTCT 62.515 66.667 30.18 9.71 0.00 4.18
4667 5303 3.771160 ATTCCGGGCGCTCGTCTT 61.771 61.111 30.18 9.49 0.00 3.01
4668 5304 3.718210 ATTCCGGGCGCTCGTCTTC 62.718 63.158 30.18 0.00 0.00 2.87
4670 5306 3.515286 CCGGGCGCTCGTCTTCTA 61.515 66.667 30.18 0.00 0.00 2.10
4671 5307 2.278013 CGGGCGCTCGTCTTCTAC 60.278 66.667 24.35 0.00 0.00 2.59
4689 5325 9.411801 GTCTTCTACGATCATATTATGCAAAGA 57.588 33.333 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 7.437862 GCATTTTTCAAAGTCCACAATCTACAA 59.562 33.333 0.00 0.00 0.00 2.41
118 119 6.056236 AGTTCATCAGAGTAGCTATCACGTA 58.944 40.000 0.00 0.00 0.00 3.57
143 144 3.620427 TTGATGGCCTAACACATACGT 57.380 42.857 3.32 0.00 0.00 3.57
189 190 4.856789 TCCACTACGGAGCCTCAA 57.143 55.556 0.00 0.00 39.64 3.02
216 218 2.093500 AGTGGATGACAATCTAGCGCAA 60.093 45.455 11.47 0.00 32.95 4.85
293 295 1.302949 GGGTTATGTGGCAGCCAGA 59.697 57.895 16.83 15.79 32.34 3.86
349 351 1.820519 TGCAATCCCAAGTGAAGATGC 59.179 47.619 0.00 0.00 0.00 3.91
358 360 1.134907 GTCCAAGCATGCAATCCCAAG 60.135 52.381 21.98 0.00 0.00 3.61
368 370 0.179156 GTGGCGATTGTCCAAGCATG 60.179 55.000 0.00 0.00 35.01 4.06
387 389 5.434352 CTGCCAATATCAGGATGTTTCTG 57.566 43.478 0.00 0.00 37.40 3.02
402 404 3.557686 GGAAAATTCAAGTGCCTGCCAAT 60.558 43.478 0.00 0.00 0.00 3.16
494 496 6.323739 TGCTCCTTTCCATAAAACAAGAAAGT 59.676 34.615 9.69 0.00 42.26 2.66
496 498 6.723298 TGCTCCTTTCCATAAAACAAGAAA 57.277 33.333 0.00 0.00 0.00 2.52
507 511 5.010012 CCGCTTATAAAATGCTCCTTTCCAT 59.990 40.000 0.00 0.00 0.00 3.41
629 634 2.102757 TGCAACAAGTGTTCATGCCAAT 59.897 40.909 4.59 0.00 35.83 3.16
915 929 1.836391 TCCTGTGGTGGACCTGTTG 59.164 57.895 0.00 0.00 36.82 3.33
1080 1228 1.281867 TGCTTCTCCCAATCCGATTGT 59.718 47.619 17.86 0.00 38.59 2.71
1133 1281 6.743575 ATTGATCCGTTTCTTCTTCGAATT 57.256 33.333 0.00 0.00 0.00 2.17
1204 1352 7.463961 ACCGACGGATTTACTATTATCTCAT 57.536 36.000 23.38 0.00 0.00 2.90
1222 1370 1.986698 ACAGAATCCGTAAACCGACG 58.013 50.000 0.00 0.00 42.55 5.12
1261 1409 1.203075 ACAGAGACGGAGGAGGTTTCT 60.203 52.381 0.00 0.00 29.78 2.52
1303 1456 8.968969 TCCAATCCTACTAGTAAAAGAACTCTC 58.031 37.037 3.76 0.00 0.00 3.20
1523 1680 4.752101 GTCGCTCAAATGGATATTAGTGCT 59.248 41.667 0.00 0.00 0.00 4.40
1524 1681 4.511454 TGTCGCTCAAATGGATATTAGTGC 59.489 41.667 0.00 0.00 0.00 4.40
1525 1682 6.258727 ACTTGTCGCTCAAATGGATATTAGTG 59.741 38.462 0.00 0.00 35.48 2.74
1527 1684 6.851222 ACTTGTCGCTCAAATGGATATTAG 57.149 37.500 0.00 0.00 35.48 1.73
1528 1685 8.902540 ATTACTTGTCGCTCAAATGGATATTA 57.097 30.769 0.00 0.00 35.48 0.98
1529 1686 7.807977 ATTACTTGTCGCTCAAATGGATATT 57.192 32.000 0.00 0.00 35.48 1.28
1531 1688 7.387673 CCATATTACTTGTCGCTCAAATGGATA 59.612 37.037 11.69 1.55 39.71 2.59
1543 1700 4.997395 CCCTCCAATCCATATTACTTGTCG 59.003 45.833 0.00 0.00 0.00 4.35
1673 1830 2.107953 GCAGCTCGCTTAGGGAGG 59.892 66.667 24.26 12.05 41.88 4.30
1709 1866 1.134220 CGCTTAGCCTGTCCCCATTAA 60.134 52.381 0.00 0.00 0.00 1.40
1829 2031 3.699779 TGACGATCTGTGAGAGCATAC 57.300 47.619 0.00 0.00 27.99 2.39
1864 2066 8.585471 ACACCATTCATTTGAACTAGATCATT 57.415 30.769 3.25 0.00 36.80 2.57
1893 2095 2.070262 TCTTGTCTGTCACATCAGCG 57.930 50.000 0.00 0.00 33.90 5.18
2083 2285 1.300156 GCACGCGATAGGCATCAGA 60.300 57.895 15.93 0.00 43.84 3.27
2203 2405 4.757149 GCAATAGCTTAGGATGTTGGGTAG 59.243 45.833 0.00 0.00 37.91 3.18
2287 2490 3.341857 GACGAGTCGAGCATGTTCTAT 57.658 47.619 21.50 0.00 0.00 1.98
2377 2580 4.662278 TCATAGGGCCAATTATTGTAGGC 58.338 43.478 6.18 0.39 46.28 3.93
2521 2727 5.641209 CACTTCGAAATTCCAGAGACAGATT 59.359 40.000 0.00 0.00 0.00 2.40
2693 2952 2.559840 CAAGCACAGGAGCAAGCG 59.440 61.111 0.00 0.00 36.85 4.68
2864 3123 3.138304 TCCCACTTCACATCTGTTTTCG 58.862 45.455 0.00 0.00 0.00 3.46
2925 3184 5.591877 GGACTGGAAACCGTAGATAGTTAGA 59.408 44.000 0.00 0.00 0.00 2.10
2940 3199 4.393834 TGAAATTGTCATCGGACTGGAAA 58.606 39.130 0.00 0.00 44.61 3.13
2976 3235 2.670210 CGCAGCTTGCATGACACGA 61.670 57.895 3.33 0.00 45.36 4.35
3119 3378 3.134442 GGATGCCTCTGTGATCTTCTTCT 59.866 47.826 0.00 0.00 0.00 2.85
3307 3577 4.096732 CCAATTAGGCTACAACACAAGC 57.903 45.455 0.00 0.00 38.03 4.01
3388 3658 0.606096 CACATGGACACGGGTAGTCA 59.394 55.000 0.00 0.00 37.74 3.41
3428 3698 1.227943 GCTGCACCACCTTCTCACA 60.228 57.895 0.00 0.00 0.00 3.58
3594 3864 0.245539 TACCTCACCGCACTTACTGC 59.754 55.000 0.00 0.00 43.21 4.40
3595 3865 1.271379 TGTACCTCACCGCACTTACTG 59.729 52.381 0.00 0.00 0.00 2.74
3596 3866 1.624336 TGTACCTCACCGCACTTACT 58.376 50.000 0.00 0.00 0.00 2.24
3597 3867 2.268298 CATGTACCTCACCGCACTTAC 58.732 52.381 0.00 0.00 0.00 2.34
3598 3868 1.404986 GCATGTACCTCACCGCACTTA 60.405 52.381 0.00 0.00 0.00 2.24
3599 3869 0.673644 GCATGTACCTCACCGCACTT 60.674 55.000 0.00 0.00 0.00 3.16
3600 3870 1.079127 GCATGTACCTCACCGCACT 60.079 57.895 0.00 0.00 0.00 4.40
3601 3871 1.361668 CTGCATGTACCTCACCGCAC 61.362 60.000 0.00 0.00 35.12 5.34
3602 3872 1.079197 CTGCATGTACCTCACCGCA 60.079 57.895 0.00 0.00 36.69 5.69
3603 3873 1.079127 ACTGCATGTACCTCACCGC 60.079 57.895 0.00 0.00 0.00 5.68
3604 3874 0.740868 CCACTGCATGTACCTCACCG 60.741 60.000 0.00 0.00 0.00 4.94
3605 3875 0.324943 ACCACTGCATGTACCTCACC 59.675 55.000 0.00 0.00 0.00 4.02
3606 3876 1.676014 GGACCACTGCATGTACCTCAC 60.676 57.143 0.00 0.00 0.00 3.51
3607 3877 0.613260 GGACCACTGCATGTACCTCA 59.387 55.000 0.00 0.00 0.00 3.86
3608 3878 0.460284 CGGACCACTGCATGTACCTC 60.460 60.000 0.00 0.00 0.00 3.85
3609 3879 1.192146 ACGGACCACTGCATGTACCT 61.192 55.000 0.00 0.00 0.00 3.08
3610 3880 0.739813 GACGGACCACTGCATGTACC 60.740 60.000 0.00 0.00 0.00 3.34
3611 3881 0.739813 GGACGGACCACTGCATGTAC 60.740 60.000 0.00 0.00 38.79 2.90
3614 3884 2.436646 GGGACGGACCACTGCATG 60.437 66.667 0.00 0.00 41.20 4.06
3615 3885 2.607750 AGGGACGGACCACTGCAT 60.608 61.111 0.00 0.00 41.20 3.96
3616 3886 3.625897 CAGGGACGGACCACTGCA 61.626 66.667 0.00 0.00 41.20 4.41
3617 3887 4.394712 CCAGGGACGGACCACTGC 62.395 72.222 0.00 0.00 41.20 4.40
3618 3888 2.923035 ACCAGGGACGGACCACTG 60.923 66.667 0.00 3.86 41.20 3.66
3619 3889 2.923035 CACCAGGGACGGACCACT 60.923 66.667 0.00 0.00 41.20 4.00
3620 3890 4.016706 CCACCAGGGACGGACCAC 62.017 72.222 0.00 0.00 40.01 4.16
3621 3891 4.242586 TCCACCAGGGACGGACCA 62.243 66.667 0.00 0.00 42.15 4.02
3629 3899 4.351054 GCCACCAGTCCACCAGGG 62.351 72.222 0.00 0.00 34.83 4.45
3630 3900 3.132029 TTGCCACCAGTCCACCAGG 62.132 63.158 0.00 0.00 0.00 4.45
3631 3901 1.898574 GTTGCCACCAGTCCACCAG 60.899 63.158 0.00 0.00 0.00 4.00
3632 3902 2.194597 GTTGCCACCAGTCCACCA 59.805 61.111 0.00 0.00 0.00 4.17
3633 3903 1.600916 GAGTTGCCACCAGTCCACC 60.601 63.158 0.00 0.00 0.00 4.61
3635 3905 2.836154 GGAGTTGCCACCAGTCCA 59.164 61.111 0.00 0.00 36.34 4.02
3636 3906 2.358737 CGGAGTTGCCACCAGTCC 60.359 66.667 0.00 0.00 35.94 3.85
3637 3907 2.358737 CCGGAGTTGCCACCAGTC 60.359 66.667 0.00 0.00 35.94 3.51
3638 3908 4.643387 GCCGGAGTTGCCACCAGT 62.643 66.667 5.05 0.00 35.94 4.00
3645 3915 3.660111 AAACTGCGCCGGAGTTGC 61.660 61.111 24.53 3.07 33.85 4.17
3646 3916 2.252260 CAAACTGCGCCGGAGTTG 59.748 61.111 24.53 14.33 33.85 3.16
3648 3918 2.972505 CACAAACTGCGCCGGAGT 60.973 61.111 5.10 5.10 0.00 3.85
3657 3927 3.061322 CAACCAATGGATGCACAAACTG 58.939 45.455 6.16 0.00 0.00 3.16
3658 3928 3.389925 CAACCAATGGATGCACAAACT 57.610 42.857 6.16 0.00 0.00 2.66
3666 3936 2.008268 GCCGGAGCAACCAATGGATG 62.008 60.000 5.05 5.54 39.53 3.51
3668 3938 2.361104 GCCGGAGCAACCAATGGA 60.361 61.111 5.05 0.00 39.53 3.41
3669 3939 3.814268 CGCCGGAGCAACCAATGG 61.814 66.667 5.05 0.00 39.83 3.16
3670 3940 4.481112 GCGCCGGAGCAACCAATG 62.481 66.667 26.33 0.00 39.83 2.82
3724 4313 4.815308 TGTTGCAAATTTCTCCAACCAATG 59.185 37.500 0.00 0.00 37.38 2.82
3728 4317 4.213906 CCATTGTTGCAAATTTCTCCAACC 59.786 41.667 0.00 0.00 37.38 3.77
3729 4318 5.055812 TCCATTGTTGCAAATTTCTCCAAC 58.944 37.500 0.00 14.42 38.36 3.77
3730 4319 5.287674 TCCATTGTTGCAAATTTCTCCAA 57.712 34.783 0.00 0.00 0.00 3.53
3731 4320 4.952071 TCCATTGTTGCAAATTTCTCCA 57.048 36.364 0.00 0.00 0.00 3.86
3754 4345 4.165036 CACTCGATTCCGATGATGATCTC 58.835 47.826 0.00 0.00 44.62 2.75
3764 4355 2.163818 AAACAAGCACTCGATTCCGA 57.836 45.000 0.00 0.00 43.35 4.55
3772 4363 6.200854 CCAAATAAGGAACAAAACAAGCACTC 59.799 38.462 0.00 0.00 0.00 3.51
3857 4492 5.278660 GCATCGGATCAGGCAAATTATTTCT 60.279 40.000 0.00 0.00 0.00 2.52
3858 4493 4.919754 GCATCGGATCAGGCAAATTATTTC 59.080 41.667 0.00 0.00 0.00 2.17
3862 4498 2.880268 CAGCATCGGATCAGGCAAATTA 59.120 45.455 0.00 0.00 0.00 1.40
3883 4519 7.504403 AGTATATGCCACTAATATGCTCATCC 58.496 38.462 0.00 0.00 30.01 3.51
3923 4559 3.749036 AGGGGCCCTTATTCTACTTCTT 58.251 45.455 22.67 0.00 0.00 2.52
3947 4583 3.163594 CGTTTTCAGAATCATGCGTTCC 58.836 45.455 6.95 0.00 0.00 3.62
3991 4627 1.074775 TCGCCCCATTGAAGTTGCT 59.925 52.632 0.00 0.00 0.00 3.91
3992 4628 1.212751 GTCGCCCCATTGAAGTTGC 59.787 57.895 0.00 0.00 0.00 4.17
3993 4629 1.883021 GGTCGCCCCATTGAAGTTG 59.117 57.895 0.00 0.00 0.00 3.16
3994 4630 4.415783 GGTCGCCCCATTGAAGTT 57.584 55.556 0.00 0.00 0.00 2.66
4008 4644 3.945304 ATCGCCGTCCGTTTGGGTC 62.945 63.158 0.00 0.00 38.35 4.46
4009 4645 3.540367 AATCGCCGTCCGTTTGGGT 62.540 57.895 0.00 0.00 38.35 4.51
4010 4646 2.248274 GAAATCGCCGTCCGTTTGGG 62.248 60.000 0.00 0.00 38.35 4.12
4011 4647 1.133869 GAAATCGCCGTCCGTTTGG 59.866 57.895 0.00 0.00 38.35 3.28
4012 4648 1.225637 CGAAATCGCCGTCCGTTTG 60.226 57.895 0.00 0.00 38.35 2.93
4013 4649 1.665599 ACGAAATCGCCGTCCGTTT 60.666 52.632 2.15 0.00 44.43 3.60
4014 4650 2.048877 ACGAAATCGCCGTCCGTT 60.049 55.556 2.15 0.00 44.43 4.44
4019 4655 1.161843 AAAATGGACGAAATCGCCGT 58.838 45.000 2.15 4.20 44.43 5.68
4020 4656 2.256445 AAAAATGGACGAAATCGCCG 57.744 45.000 2.15 0.00 44.43 6.46
4067 4703 3.403936 ATCTAAACAGGGCGGATGC 57.596 52.632 0.00 0.00 41.71 3.91
4365 5001 8.931775 GCTATTTTATTCGGTCCAAAACAATTT 58.068 29.630 0.00 0.00 0.00 1.82
4366 5002 8.091449 TGCTATTTTATTCGGTCCAAAACAATT 58.909 29.630 0.00 0.00 0.00 2.32
4367 5003 7.607250 TGCTATTTTATTCGGTCCAAAACAAT 58.393 30.769 0.00 0.00 0.00 2.71
4368 5004 6.982852 TGCTATTTTATTCGGTCCAAAACAA 58.017 32.000 0.00 0.00 0.00 2.83
4369 5005 6.576662 TGCTATTTTATTCGGTCCAAAACA 57.423 33.333 0.00 0.00 0.00 2.83
4370 5006 8.403236 ACTATGCTATTTTATTCGGTCCAAAAC 58.597 33.333 0.00 0.00 0.00 2.43
4371 5007 8.514330 ACTATGCTATTTTATTCGGTCCAAAA 57.486 30.769 0.00 0.00 0.00 2.44
4372 5008 8.514330 AACTATGCTATTTTATTCGGTCCAAA 57.486 30.769 0.00 0.00 0.00 3.28
4373 5009 8.514330 AAACTATGCTATTTTATTCGGTCCAA 57.486 30.769 0.00 0.00 0.00 3.53
4374 5010 9.787435 ATAAACTATGCTATTTTATTCGGTCCA 57.213 29.630 0.00 0.00 0.00 4.02
4388 5024 9.184523 ACATTTGGCTTGTAATAAACTATGCTA 57.815 29.630 0.00 0.00 0.00 3.49
4389 5025 8.066612 ACATTTGGCTTGTAATAAACTATGCT 57.933 30.769 0.00 0.00 0.00 3.79
4390 5026 9.796120 TTACATTTGGCTTGTAATAAACTATGC 57.204 29.630 4.79 0.00 35.27 3.14
4401 5037 9.699703 GACCTTTTTATTTACATTTGGCTTGTA 57.300 29.630 0.00 0.00 0.00 2.41
4402 5038 8.428852 AGACCTTTTTATTTACATTTGGCTTGT 58.571 29.630 0.00 0.00 0.00 3.16
4403 5039 8.831715 AGACCTTTTTATTTACATTTGGCTTG 57.168 30.769 0.00 0.00 0.00 4.01
4405 5041 9.923143 GTAAGACCTTTTTATTTACATTTGGCT 57.077 29.630 0.00 0.00 0.00 4.75
4406 5042 9.699703 TGTAAGACCTTTTTATTTACATTTGGC 57.300 29.630 0.00 0.00 31.41 4.52
4415 5051 9.959721 TGAGAGCTATGTAAGACCTTTTTATTT 57.040 29.630 0.00 0.00 0.00 1.40
4416 5052 9.384764 GTGAGAGCTATGTAAGACCTTTTTATT 57.615 33.333 0.00 0.00 0.00 1.40
4417 5053 8.540388 TGTGAGAGCTATGTAAGACCTTTTTAT 58.460 33.333 0.00 0.00 0.00 1.40
4418 5054 7.903145 TGTGAGAGCTATGTAAGACCTTTTTA 58.097 34.615 0.00 0.00 0.00 1.52
4419 5055 6.769512 TGTGAGAGCTATGTAAGACCTTTTT 58.230 36.000 0.00 0.00 0.00 1.94
4420 5056 6.360370 TGTGAGAGCTATGTAAGACCTTTT 57.640 37.500 0.00 0.00 0.00 2.27
4421 5057 6.552445 ATGTGAGAGCTATGTAAGACCTTT 57.448 37.500 0.00 0.00 0.00 3.11
4422 5058 6.836527 ACTATGTGAGAGCTATGTAAGACCTT 59.163 38.462 0.00 0.00 0.00 3.50
4423 5059 6.369629 ACTATGTGAGAGCTATGTAAGACCT 58.630 40.000 0.00 0.00 0.00 3.85
4424 5060 6.642707 ACTATGTGAGAGCTATGTAAGACC 57.357 41.667 0.00 0.00 0.00 3.85
4425 5061 8.812329 CAAAACTATGTGAGAGCTATGTAAGAC 58.188 37.037 0.00 0.00 0.00 3.01
4426 5062 7.492669 GCAAAACTATGTGAGAGCTATGTAAGA 59.507 37.037 0.00 0.00 0.00 2.10
4427 5063 7.278646 TGCAAAACTATGTGAGAGCTATGTAAG 59.721 37.037 0.00 0.00 0.00 2.34
4428 5064 7.102993 TGCAAAACTATGTGAGAGCTATGTAA 58.897 34.615 0.00 0.00 0.00 2.41
4429 5065 6.639563 TGCAAAACTATGTGAGAGCTATGTA 58.360 36.000 0.00 0.00 0.00 2.29
4430 5066 5.491070 TGCAAAACTATGTGAGAGCTATGT 58.509 37.500 0.00 0.00 0.00 2.29
4431 5067 6.426980 TTGCAAAACTATGTGAGAGCTATG 57.573 37.500 0.00 0.00 0.00 2.23
4432 5068 7.337689 TCATTTGCAAAACTATGTGAGAGCTAT 59.662 33.333 17.19 0.00 0.00 2.97
4433 5069 6.654582 TCATTTGCAAAACTATGTGAGAGCTA 59.345 34.615 17.19 0.00 0.00 3.32
4434 5070 5.474532 TCATTTGCAAAACTATGTGAGAGCT 59.525 36.000 17.19 0.00 0.00 4.09
4435 5071 5.702865 TCATTTGCAAAACTATGTGAGAGC 58.297 37.500 17.19 0.00 0.00 4.09
4436 5072 9.844790 TTATTCATTTGCAAAACTATGTGAGAG 57.155 29.630 17.19 0.00 0.00 3.20
4460 5096 9.120538 GGCAACCAATAGATGTATCTTCTTTTA 57.879 33.333 0.00 0.00 38.32 1.52
4461 5097 7.615365 TGGCAACCAATAGATGTATCTTCTTTT 59.385 33.333 0.00 0.00 38.32 2.27
4462 5098 7.118723 TGGCAACCAATAGATGTATCTTCTTT 58.881 34.615 0.00 0.00 38.32 2.52
4463 5099 6.662755 TGGCAACCAATAGATGTATCTTCTT 58.337 36.000 0.00 0.00 38.32 2.52
4464 5100 6.252599 TGGCAACCAATAGATGTATCTTCT 57.747 37.500 0.00 0.00 38.32 2.85
4465 5101 6.318648 TGTTGGCAACCAATAGATGTATCTTC 59.681 38.462 26.31 0.00 45.80 2.87
4466 5102 6.186957 TGTTGGCAACCAATAGATGTATCTT 58.813 36.000 26.31 0.00 45.80 2.40
4467 5103 5.754782 TGTTGGCAACCAATAGATGTATCT 58.245 37.500 26.31 0.00 45.80 1.98
4468 5104 6.262944 TCATGTTGGCAACCAATAGATGTATC 59.737 38.462 26.31 0.00 45.80 2.24
4469 5105 6.128486 TCATGTTGGCAACCAATAGATGTAT 58.872 36.000 26.31 7.24 45.80 2.29
4470 5106 5.504853 TCATGTTGGCAACCAATAGATGTA 58.495 37.500 26.31 5.08 45.80 2.29
4471 5107 4.343231 TCATGTTGGCAACCAATAGATGT 58.657 39.130 26.31 0.10 45.80 3.06
4472 5108 4.735578 GCTCATGTTGGCAACCAATAGATG 60.736 45.833 26.31 20.43 45.80 2.90
4473 5109 3.382546 GCTCATGTTGGCAACCAATAGAT 59.617 43.478 26.31 10.10 45.80 1.98
4474 5110 2.754552 GCTCATGTTGGCAACCAATAGA 59.245 45.455 26.31 15.20 45.80 1.98
4475 5111 2.159198 GGCTCATGTTGGCAACCAATAG 60.159 50.000 26.31 18.18 45.80 1.73
4476 5112 1.824230 GGCTCATGTTGGCAACCAATA 59.176 47.619 26.31 9.22 45.80 1.90
4477 5113 0.609662 GGCTCATGTTGGCAACCAAT 59.390 50.000 26.31 12.28 45.80 3.16
4478 5114 1.470996 GGGCTCATGTTGGCAACCAA 61.471 55.000 26.31 10.36 41.69 3.67
4479 5115 1.907807 GGGCTCATGTTGGCAACCA 60.908 57.895 26.31 15.17 0.00 3.67
4480 5116 1.907807 TGGGCTCATGTTGGCAACC 60.908 57.895 26.31 10.64 0.00 3.77
4481 5117 1.290009 GTGGGCTCATGTTGGCAAC 59.710 57.895 23.12 23.12 0.00 4.17
4482 5118 0.542467 ATGTGGGCTCATGTTGGCAA 60.542 50.000 14.32 0.00 0.00 4.52
4483 5119 0.330941 TATGTGGGCTCATGTTGGCA 59.669 50.000 14.32 0.00 0.00 4.92
4484 5120 1.696063 ATATGTGGGCTCATGTTGGC 58.304 50.000 0.00 0.00 0.00 4.52
4485 5121 4.067896 GAGTATATGTGGGCTCATGTTGG 58.932 47.826 0.00 0.00 0.00 3.77
4486 5122 4.707105 TGAGTATATGTGGGCTCATGTTG 58.293 43.478 0.00 0.00 33.62 3.33
4487 5123 5.126067 GTTGAGTATATGTGGGCTCATGTT 58.874 41.667 0.00 0.00 37.74 2.71
4488 5124 4.444876 GGTTGAGTATATGTGGGCTCATGT 60.445 45.833 0.00 2.94 37.74 3.21
4489 5125 4.067896 GGTTGAGTATATGTGGGCTCATG 58.932 47.826 0.00 0.00 37.74 3.07
4490 5126 3.716353 TGGTTGAGTATATGTGGGCTCAT 59.284 43.478 0.00 0.00 37.74 2.90
4491 5127 3.111484 TGGTTGAGTATATGTGGGCTCA 58.889 45.455 0.00 0.00 36.35 4.26
4492 5128 3.838244 TGGTTGAGTATATGTGGGCTC 57.162 47.619 0.00 0.00 0.00 4.70
4493 5129 4.584638 TTTGGTTGAGTATATGTGGGCT 57.415 40.909 0.00 0.00 0.00 5.19
4494 5130 4.887071 TGATTTGGTTGAGTATATGTGGGC 59.113 41.667 0.00 0.00 0.00 5.36
4495 5131 7.587037 AATGATTTGGTTGAGTATATGTGGG 57.413 36.000 0.00 0.00 0.00 4.61
4496 5132 9.304731 CAAAATGATTTGGTTGAGTATATGTGG 57.695 33.333 0.00 0.00 41.81 4.17
4497 5133 8.810427 GCAAAATGATTTGGTTGAGTATATGTG 58.190 33.333 0.00 0.00 44.93 3.21
4498 5134 8.530311 TGCAAAATGATTTGGTTGAGTATATGT 58.470 29.630 0.00 0.00 44.93 2.29
4499 5135 8.929827 TGCAAAATGATTTGGTTGAGTATATG 57.070 30.769 0.00 0.00 44.93 1.78
4500 5136 8.752187 ACTGCAAAATGATTTGGTTGAGTATAT 58.248 29.630 0.00 0.00 44.93 0.86
4501 5137 8.121305 ACTGCAAAATGATTTGGTTGAGTATA 57.879 30.769 0.00 0.00 44.93 1.47
4502 5138 6.996509 ACTGCAAAATGATTTGGTTGAGTAT 58.003 32.000 0.00 0.00 44.93 2.12
4503 5139 6.403866 ACTGCAAAATGATTTGGTTGAGTA 57.596 33.333 0.00 0.00 44.93 2.59
4504 5140 5.280654 ACTGCAAAATGATTTGGTTGAGT 57.719 34.783 0.00 0.00 44.93 3.41
4505 5141 5.559417 GCAACTGCAAAATGATTTGGTTGAG 60.559 40.000 19.87 7.85 43.67 3.02
4506 5142 4.272991 GCAACTGCAAAATGATTTGGTTGA 59.727 37.500 19.87 0.00 43.67 3.18
4507 5143 4.529446 GCAACTGCAAAATGATTTGGTTG 58.471 39.130 15.28 15.28 44.93 3.77
4508 5144 4.816786 GCAACTGCAAAATGATTTGGTT 57.183 36.364 0.00 0.00 44.93 3.67
4522 5158 1.262166 GAAAACTCGCGTGCAACTGC 61.262 55.000 5.77 0.00 42.50 4.40
4523 5159 0.027455 TGAAAACTCGCGTGCAACTG 59.973 50.000 5.77 0.00 31.75 3.16
4524 5160 0.730265 TTGAAAACTCGCGTGCAACT 59.270 45.000 5.77 0.00 31.75 3.16
4525 5161 1.708680 GATTGAAAACTCGCGTGCAAC 59.291 47.619 5.77 0.00 0.00 4.17
4526 5162 1.332065 TGATTGAAAACTCGCGTGCAA 59.668 42.857 5.77 3.62 0.00 4.08
4527 5163 0.940833 TGATTGAAAACTCGCGTGCA 59.059 45.000 5.77 0.00 0.00 4.57
4528 5164 1.318251 GTGATTGAAAACTCGCGTGC 58.682 50.000 5.77 0.00 0.00 5.34
4529 5165 1.580439 CGTGATTGAAAACTCGCGTG 58.420 50.000 5.77 6.24 39.76 5.34
4530 5166 0.110823 GCGTGATTGAAAACTCGCGT 60.111 50.000 5.77 0.00 44.79 6.01
4531 5167 0.110867 TGCGTGATTGAAAACTCGCG 60.111 50.000 0.00 0.00 46.77 5.87
4532 5168 1.906966 CATGCGTGATTGAAAACTCGC 59.093 47.619 0.00 11.30 45.02 5.03
4533 5169 2.904319 CACATGCGTGATTGAAAACTCG 59.096 45.455 14.17 0.00 46.80 4.18
4534 5170 3.888934 ACACATGCGTGATTGAAAACTC 58.111 40.909 14.17 0.00 46.80 3.01
4535 5171 3.988379 ACACATGCGTGATTGAAAACT 57.012 38.095 14.17 0.00 46.80 2.66
4536 5172 4.041049 TCAACACATGCGTGATTGAAAAC 58.959 39.130 20.65 0.00 46.80 2.43
4537 5173 4.298744 TCAACACATGCGTGATTGAAAA 57.701 36.364 20.65 5.96 46.80 2.29
4538 5174 3.978718 TCAACACATGCGTGATTGAAA 57.021 38.095 20.65 6.49 46.80 2.69
4539 5175 3.501445 TCATCAACACATGCGTGATTGAA 59.499 39.130 24.22 12.89 46.80 2.69
4540 5176 3.072944 TCATCAACACATGCGTGATTGA 58.927 40.909 23.29 23.29 46.80 2.57
4541 5177 3.474693 TCATCAACACATGCGTGATTG 57.525 42.857 14.17 15.76 46.80 2.67
4542 5178 4.502171 TTTCATCAACACATGCGTGATT 57.498 36.364 14.17 3.57 46.80 2.57
4543 5179 4.707030 ATTTCATCAACACATGCGTGAT 57.293 36.364 14.17 0.00 46.80 3.06
4544 5180 4.228317 CAATTTCATCAACACATGCGTGA 58.772 39.130 14.17 0.00 46.80 4.35
4546 5182 3.255395 TCCAATTTCATCAACACATGCGT 59.745 39.130 0.00 0.00 0.00 5.24
4547 5183 3.835779 TCCAATTTCATCAACACATGCG 58.164 40.909 0.00 0.00 0.00 4.73
4548 5184 5.412640 TCATCCAATTTCATCAACACATGC 58.587 37.500 0.00 0.00 0.00 4.06
4549 5185 7.435192 CAGATCATCCAATTTCATCAACACATG 59.565 37.037 0.00 0.00 0.00 3.21
4550 5186 7.123697 ACAGATCATCCAATTTCATCAACACAT 59.876 33.333 0.00 0.00 0.00 3.21
4551 5187 6.434965 ACAGATCATCCAATTTCATCAACACA 59.565 34.615 0.00 0.00 0.00 3.72
4552 5188 6.860080 ACAGATCATCCAATTTCATCAACAC 58.140 36.000 0.00 0.00 0.00 3.32
4553 5189 7.177041 TGAACAGATCATCCAATTTCATCAACA 59.823 33.333 0.00 0.00 31.50 3.33
4554 5190 7.541162 TGAACAGATCATCCAATTTCATCAAC 58.459 34.615 0.00 0.00 31.50 3.18
4555 5191 7.706100 TGAACAGATCATCCAATTTCATCAA 57.294 32.000 0.00 0.00 31.50 2.57
4556 5192 7.706100 TTGAACAGATCATCCAATTTCATCA 57.294 32.000 0.00 0.00 38.03 3.07
4557 5193 8.030692 TGTTTGAACAGATCATCCAATTTCATC 58.969 33.333 0.00 0.00 38.03 2.92
4558 5194 7.898918 TGTTTGAACAGATCATCCAATTTCAT 58.101 30.769 0.00 0.00 38.03 2.57
4559 5195 7.287512 TGTTTGAACAGATCATCCAATTTCA 57.712 32.000 0.00 0.00 38.03 2.69
4560 5196 8.653338 CAATGTTTGAACAGATCATCCAATTTC 58.347 33.333 2.77 0.00 43.04 2.17
4561 5197 7.118680 GCAATGTTTGAACAGATCATCCAATTT 59.881 33.333 2.77 0.00 43.04 1.82
4562 5198 6.592607 GCAATGTTTGAACAGATCATCCAATT 59.407 34.615 2.77 0.00 43.04 2.32
4563 5199 6.103997 GCAATGTTTGAACAGATCATCCAAT 58.896 36.000 2.77 0.00 43.04 3.16
4564 5200 5.472148 GCAATGTTTGAACAGATCATCCAA 58.528 37.500 2.77 0.00 43.04 3.53
4565 5201 4.082081 GGCAATGTTTGAACAGATCATCCA 60.082 41.667 2.77 0.00 43.04 3.41
4566 5202 4.427312 GGCAATGTTTGAACAGATCATCC 58.573 43.478 2.77 0.00 43.04 3.51
4567 5203 4.100529 CGGCAATGTTTGAACAGATCATC 58.899 43.478 2.77 0.00 43.04 2.92
4568 5204 3.674138 GCGGCAATGTTTGAACAGATCAT 60.674 43.478 2.77 0.00 43.04 2.45
4569 5205 2.351641 GCGGCAATGTTTGAACAGATCA 60.352 45.455 2.77 0.00 43.04 2.92
4570 5206 2.095059 AGCGGCAATGTTTGAACAGATC 60.095 45.455 1.45 0.00 43.04 2.75
4571 5207 1.888512 AGCGGCAATGTTTGAACAGAT 59.111 42.857 1.45 0.00 43.04 2.90
4572 5208 1.317613 AGCGGCAATGTTTGAACAGA 58.682 45.000 1.45 0.00 43.04 3.41
4573 5209 2.226437 AGTAGCGGCAATGTTTGAACAG 59.774 45.455 1.45 0.00 43.04 3.16
4574 5210 2.225491 GAGTAGCGGCAATGTTTGAACA 59.775 45.455 1.45 0.00 44.06 3.18
4575 5211 2.414161 GGAGTAGCGGCAATGTTTGAAC 60.414 50.000 1.45 0.00 0.00 3.18
4576 5212 1.810151 GGAGTAGCGGCAATGTTTGAA 59.190 47.619 1.45 0.00 0.00 2.69
4577 5213 1.271108 TGGAGTAGCGGCAATGTTTGA 60.271 47.619 1.45 0.00 0.00 2.69
4578 5214 1.164411 TGGAGTAGCGGCAATGTTTG 58.836 50.000 1.45 0.00 0.00 2.93
4579 5215 1.745087 CATGGAGTAGCGGCAATGTTT 59.255 47.619 1.45 0.00 0.00 2.83
4580 5216 1.382522 CATGGAGTAGCGGCAATGTT 58.617 50.000 1.45 0.00 0.00 2.71
4581 5217 1.097547 GCATGGAGTAGCGGCAATGT 61.098 55.000 1.45 0.00 0.00 2.71
4582 5218 0.816825 AGCATGGAGTAGCGGCAATG 60.817 55.000 1.45 0.00 35.48 2.82
4583 5219 0.533755 GAGCATGGAGTAGCGGCAAT 60.534 55.000 1.45 0.00 35.48 3.56
4584 5220 1.153369 GAGCATGGAGTAGCGGCAA 60.153 57.895 1.45 0.00 35.48 4.52
4585 5221 2.302199 CTGAGCATGGAGTAGCGGCA 62.302 60.000 1.45 0.00 35.48 5.69
4586 5222 1.593750 CTGAGCATGGAGTAGCGGC 60.594 63.158 0.00 0.00 35.48 6.53
4587 5223 1.068753 CCTGAGCATGGAGTAGCGG 59.931 63.158 0.00 0.00 35.48 5.52
4588 5224 1.593750 GCCTGAGCATGGAGTAGCG 60.594 63.158 0.00 0.00 39.53 4.26
4589 5225 1.524002 TGCCTGAGCATGGAGTAGC 59.476 57.895 0.00 0.00 46.52 3.58
4599 5235 1.198637 GTGAGAATGTTGTGCCTGAGC 59.801 52.381 0.00 0.00 40.48 4.26
4600 5236 1.808945 GGTGAGAATGTTGTGCCTGAG 59.191 52.381 0.00 0.00 0.00 3.35
4601 5237 1.545428 GGGTGAGAATGTTGTGCCTGA 60.545 52.381 0.00 0.00 0.00 3.86
4602 5238 0.883833 GGGTGAGAATGTTGTGCCTG 59.116 55.000 0.00 0.00 0.00 4.85
4603 5239 0.478072 TGGGTGAGAATGTTGTGCCT 59.522 50.000 0.00 0.00 0.00 4.75
4604 5240 0.883833 CTGGGTGAGAATGTTGTGCC 59.116 55.000 0.00 0.00 0.00 5.01
4605 5241 1.896220 TCTGGGTGAGAATGTTGTGC 58.104 50.000 0.00 0.00 0.00 4.57
4606 5242 3.885297 AGTTTCTGGGTGAGAATGTTGTG 59.115 43.478 0.00 0.00 40.53 3.33
4607 5243 3.885297 CAGTTTCTGGGTGAGAATGTTGT 59.115 43.478 0.00 0.00 40.53 3.32
4608 5244 4.136796 TCAGTTTCTGGGTGAGAATGTTG 58.863 43.478 0.00 0.00 40.53 3.33
4609 5245 4.437682 TCAGTTTCTGGGTGAGAATGTT 57.562 40.909 0.00 0.00 40.53 2.71
4610 5246 4.437682 TTCAGTTTCTGGGTGAGAATGT 57.562 40.909 0.00 0.00 40.53 2.71
4611 5247 4.022849 GGTTTCAGTTTCTGGGTGAGAATG 60.023 45.833 0.00 0.00 40.53 2.67
4612 5248 4.145052 GGTTTCAGTTTCTGGGTGAGAAT 58.855 43.478 0.00 0.00 40.53 2.40
4613 5249 3.551846 GGTTTCAGTTTCTGGGTGAGAA 58.448 45.455 0.00 0.00 39.05 2.87
4614 5250 2.158667 GGGTTTCAGTTTCTGGGTGAGA 60.159 50.000 0.00 0.00 31.51 3.27
4615 5251 2.158608 AGGGTTTCAGTTTCTGGGTGAG 60.159 50.000 0.00 0.00 31.51 3.51
4616 5252 1.850345 AGGGTTTCAGTTTCTGGGTGA 59.150 47.619 0.00 0.00 31.51 4.02
4617 5253 2.362077 CAAGGGTTTCAGTTTCTGGGTG 59.638 50.000 0.00 0.00 31.51 4.61
4618 5254 2.243736 TCAAGGGTTTCAGTTTCTGGGT 59.756 45.455 0.00 0.00 31.51 4.51
4619 5255 2.944129 TCAAGGGTTTCAGTTTCTGGG 58.056 47.619 0.00 0.00 31.51 4.45
4620 5256 4.144297 TGATCAAGGGTTTCAGTTTCTGG 58.856 43.478 0.00 0.00 31.51 3.86
4621 5257 5.972107 ATGATCAAGGGTTTCAGTTTCTG 57.028 39.130 0.00 0.00 0.00 3.02
4622 5258 6.542821 TGTATGATCAAGGGTTTCAGTTTCT 58.457 36.000 0.00 0.00 0.00 2.52
4623 5259 6.655003 TCTGTATGATCAAGGGTTTCAGTTTC 59.345 38.462 0.00 0.00 0.00 2.78
4624 5260 6.431234 GTCTGTATGATCAAGGGTTTCAGTTT 59.569 38.462 0.00 0.00 0.00 2.66
4625 5261 5.940470 GTCTGTATGATCAAGGGTTTCAGTT 59.060 40.000 0.00 0.00 0.00 3.16
4626 5262 5.013079 TGTCTGTATGATCAAGGGTTTCAGT 59.987 40.000 0.00 0.00 0.00 3.41
4627 5263 5.491070 TGTCTGTATGATCAAGGGTTTCAG 58.509 41.667 0.00 0.00 0.00 3.02
4628 5264 5.497464 TGTCTGTATGATCAAGGGTTTCA 57.503 39.130 0.00 0.00 0.00 2.69
4629 5265 6.038714 GGAATGTCTGTATGATCAAGGGTTTC 59.961 42.308 0.00 0.00 0.00 2.78
4630 5266 5.888161 GGAATGTCTGTATGATCAAGGGTTT 59.112 40.000 0.00 0.00 0.00 3.27
4631 5267 5.440610 GGAATGTCTGTATGATCAAGGGTT 58.559 41.667 0.00 0.00 0.00 4.11
4632 5268 4.443457 CGGAATGTCTGTATGATCAAGGGT 60.443 45.833 0.00 0.00 0.00 4.34
4633 5269 4.060900 CGGAATGTCTGTATGATCAAGGG 58.939 47.826 0.00 0.00 0.00 3.95
4634 5270 4.060900 CCGGAATGTCTGTATGATCAAGG 58.939 47.826 0.00 0.00 0.00 3.61
4635 5271 4.060900 CCCGGAATGTCTGTATGATCAAG 58.939 47.826 0.73 0.00 0.00 3.02
4636 5272 3.744214 GCCCGGAATGTCTGTATGATCAA 60.744 47.826 0.73 0.00 0.00 2.57
4637 5273 2.224281 GCCCGGAATGTCTGTATGATCA 60.224 50.000 0.73 0.00 0.00 2.92
4638 5274 2.417719 GCCCGGAATGTCTGTATGATC 58.582 52.381 0.73 0.00 0.00 2.92
4639 5275 1.270305 CGCCCGGAATGTCTGTATGAT 60.270 52.381 0.73 0.00 0.00 2.45
4640 5276 0.104120 CGCCCGGAATGTCTGTATGA 59.896 55.000 0.73 0.00 0.00 2.15
4641 5277 1.498865 GCGCCCGGAATGTCTGTATG 61.499 60.000 0.73 0.00 0.00 2.39
4642 5278 1.227556 GCGCCCGGAATGTCTGTAT 60.228 57.895 0.73 0.00 0.00 2.29
4643 5279 2.185867 GCGCCCGGAATGTCTGTA 59.814 61.111 0.73 0.00 0.00 2.74
4644 5280 3.665675 GAGCGCCCGGAATGTCTGT 62.666 63.158 0.73 0.00 0.00 3.41
4645 5281 2.892425 GAGCGCCCGGAATGTCTG 60.892 66.667 0.73 0.00 0.00 3.51
4646 5282 4.514577 CGAGCGCCCGGAATGTCT 62.515 66.667 2.24 0.00 0.00 3.41
4647 5283 4.814294 ACGAGCGCCCGGAATGTC 62.814 66.667 17.66 0.00 0.00 3.06
4648 5284 4.814294 GACGAGCGCCCGGAATGT 62.814 66.667 17.66 0.00 0.00 2.71
4649 5285 4.514577 AGACGAGCGCCCGGAATG 62.515 66.667 17.66 0.00 0.00 2.67
4650 5286 3.718210 GAAGACGAGCGCCCGGAAT 62.718 63.158 17.66 0.00 0.00 3.01
4651 5287 4.430765 GAAGACGAGCGCCCGGAA 62.431 66.667 17.66 0.00 0.00 4.30
4652 5288 3.982316 TAGAAGACGAGCGCCCGGA 62.982 63.158 17.66 0.00 0.00 5.14
4653 5289 3.515286 TAGAAGACGAGCGCCCGG 61.515 66.667 17.66 1.81 0.00 5.73
4654 5290 2.278013 GTAGAAGACGAGCGCCCG 60.278 66.667 10.67 10.67 0.00 6.13
4663 5299 9.411801 TCTTTGCATAATATGATCGTAGAAGAC 57.588 33.333 4.14 0.00 43.58 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.