Multiple sequence alignment - TraesCS6B01G431100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G431100 chr6B 100.000 2870 0 0 1 2870 699019714 699016845 0.000000e+00 5301.0
1 TraesCS6B01G431100 chr6A 90.280 2068 93 44 178 2160 605392680 605390636 0.000000e+00 2606.0
2 TraesCS6B01G431100 chr6D 93.992 1498 38 19 682 2160 459735879 459734415 0.000000e+00 2220.0
3 TraesCS6B01G431100 chr6D 86.207 377 21 12 179 537 459736382 459736019 2.090000e-101 379.0
4 TraesCS6B01G431100 chr6D 84.171 398 41 17 2256 2643 459734383 459733998 1.620000e-97 366.0
5 TraesCS6B01G431100 chr6D 87.179 312 22 6 1859 2160 459715726 459715423 3.540000e-89 339.0
6 TraesCS6B01G431100 chr6D 82.620 397 46 17 2256 2643 459715391 459715009 2.130000e-86 329.0
7 TraesCS6B01G431100 chr6D 93.478 92 6 0 2159 2250 305158190 305158099 1.390000e-28 137.0
8 TraesCS6B01G431100 chr6D 94.118 51 3 0 2644 2694 289214549 289214499 8.530000e-11 78.7
9 TraesCS6B01G431100 chr4B 89.224 232 23 2 2641 2870 29658912 29659143 3.620000e-74 289.0
10 TraesCS6B01G431100 chr4B 87.562 201 22 3 1112 1309 75757065 75757265 2.220000e-56 230.0
11 TraesCS6B01G431100 chr4B 90.625 96 8 1 2149 2243 500840063 500839968 3.000000e-25 126.0
12 TraesCS6B01G431100 chr7B 88.444 225 22 3 2646 2870 517056845 517056625 4.710000e-68 268.0
13 TraesCS6B01G431100 chrUn 87.336 229 25 4 2644 2870 24328305 24328531 2.840000e-65 259.0
14 TraesCS6B01G431100 chrUn 87.500 216 23 4 2645 2858 71298441 71298228 2.210000e-61 246.0
15 TraesCS6B01G431100 chrUn 88.750 160 16 1 2713 2870 255038110 255037951 8.110000e-46 195.0
16 TraesCS6B01G431100 chrUn 88.750 160 16 1 2713 2870 354972280 354972121 8.110000e-46 195.0
17 TraesCS6B01G431100 chr5D 86.486 222 22 7 1111 1330 87173742 87173527 1.330000e-58 237.0
18 TraesCS6B01G431100 chr4A 88.500 200 17 4 1112 1305 545106804 545106605 1.330000e-58 237.0
19 TraesCS6B01G431100 chr5A 87.440 207 22 4 1111 1315 80155800 80155596 4.780000e-58 235.0
20 TraesCS6B01G431100 chr5A 85.455 220 14 5 2644 2863 612916001 612915800 2.240000e-51 213.0
21 TraesCS6B01G431100 chr5A 92.308 91 7 0 2154 2244 597672356 597672266 2.320000e-26 130.0
22 TraesCS6B01G431100 chr4D 87.065 201 23 3 1112 1309 51608645 51608845 1.030000e-54 224.0
23 TraesCS6B01G431100 chr1D 84.716 229 24 6 2644 2870 475888396 475888177 4.810000e-53 219.0
24 TraesCS6B01G431100 chr2D 84.071 226 30 4 2645 2870 5421292 5421073 2.240000e-51 213.0
25 TraesCS6B01G431100 chr2D 84.390 205 24 7 2638 2840 558290779 558290977 8.110000e-46 195.0
26 TraesCS6B01G431100 chr2D 94.318 88 5 0 2159 2246 178776455 178776542 4.990000e-28 135.0
27 TraesCS6B01G431100 chr2D 91.489 94 6 2 2152 2243 649821920 649821827 8.350000e-26 128.0
28 TraesCS6B01G431100 chr2D 97.674 43 0 1 2644 2685 18743653 18743695 3.970000e-09 73.1
29 TraesCS6B01G431100 chr2B 86.082 194 26 1 1095 1287 211614087 211614280 1.040000e-49 207.0
30 TraesCS6B01G431100 chr2B 88.679 106 11 1 2151 2255 116850772 116850667 8.350000e-26 128.0
31 TraesCS6B01G431100 chr2A 83.491 212 31 4 1107 1315 146825246 146825036 8.110000e-46 195.0
32 TraesCS6B01G431100 chr2A 94.318 88 5 0 2157 2244 71546583 71546670 4.990000e-28 135.0
33 TraesCS6B01G431100 chr7D 92.708 96 7 0 2152 2247 535726806 535726711 3.860000e-29 139.0
34 TraesCS6B01G431100 chr5B 92.708 96 7 0 2156 2251 6678847 6678942 3.860000e-29 139.0
35 TraesCS6B01G431100 chr5B 93.333 90 6 0 2156 2245 419403356 419403267 1.790000e-27 134.0
36 TraesCS6B01G431100 chr5B 91.304 92 7 1 2155 2245 706389204 706389113 1.080000e-24 124.0
37 TraesCS6B01G431100 chr7A 92.473 93 5 2 2151 2243 16368520 16368610 6.450000e-27 132.0
38 TraesCS6B01G431100 chr7A 91.304 92 4 4 2153 2243 280845941 280845853 3.880000e-24 122.0
39 TraesCS6B01G431100 chr1B 91.579 95 8 0 2155 2249 392149873 392149779 6.450000e-27 132.0
40 TraesCS6B01G431100 chr3D 88.000 100 10 2 2152 2250 26275655 26275753 1.810000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G431100 chr6B 699016845 699019714 2869 True 5301.000000 5301 100.000000 1 2870 1 chr6B.!!$R1 2869
1 TraesCS6B01G431100 chr6A 605390636 605392680 2044 True 2606.000000 2606 90.280000 178 2160 1 chr6A.!!$R1 1982
2 TraesCS6B01G431100 chr6D 459733998 459736382 2384 True 988.333333 2220 88.123333 179 2643 3 chr6D.!!$R4 2464
3 TraesCS6B01G431100 chr6D 459715009 459715726 717 True 334.000000 339 84.899500 1859 2643 2 chr6D.!!$R3 784

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
25 26 0.039888 TTTTCGGCCGCTGCTTTTAC 60.04 50.0 23.51 0.0 37.74 2.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1947 2079 1.13422 TGTATGGAATTGGCTCCCGAC 60.134 52.381 0.0 0.0 34.22 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.340789 GACAACTTTTCGGCCGCT 58.659 55.556 23.51 0.00 0.00 5.52
18 19 1.082104 GACAACTTTTCGGCCGCTG 60.082 57.895 23.51 12.48 0.00 5.18
19 20 2.429069 CAACTTTTCGGCCGCTGC 60.429 61.111 23.51 0.00 0.00 5.25
20 21 2.594592 AACTTTTCGGCCGCTGCT 60.595 55.556 23.51 0.00 37.74 4.24
21 22 2.193536 AACTTTTCGGCCGCTGCTT 61.194 52.632 23.51 4.58 37.74 3.91
22 23 1.734388 AACTTTTCGGCCGCTGCTTT 61.734 50.000 23.51 7.85 37.74 3.51
23 24 1.007387 CTTTTCGGCCGCTGCTTTT 60.007 52.632 23.51 0.00 37.74 2.27
24 25 0.239879 CTTTTCGGCCGCTGCTTTTA 59.760 50.000 23.51 0.00 37.74 1.52
25 26 0.039888 TTTTCGGCCGCTGCTTTTAC 60.040 50.000 23.51 0.00 37.74 2.01
26 27 1.167155 TTTCGGCCGCTGCTTTTACA 61.167 50.000 23.51 0.00 37.74 2.41
27 28 1.573829 TTCGGCCGCTGCTTTTACAG 61.574 55.000 23.51 0.00 40.80 2.74
28 29 2.877691 GGCCGCTGCTTTTACAGG 59.122 61.111 0.00 0.00 38.16 4.00
29 30 2.179267 GCCGCTGCTTTTACAGGC 59.821 61.111 0.00 0.00 38.16 4.85
30 31 2.335712 GCCGCTGCTTTTACAGGCT 61.336 57.895 5.39 0.00 41.21 4.58
31 32 1.866853 GCCGCTGCTTTTACAGGCTT 61.867 55.000 5.39 0.00 41.21 4.35
32 33 0.169009 CCGCTGCTTTTACAGGCTTC 59.831 55.000 0.00 0.00 38.16 3.86
33 34 1.160137 CGCTGCTTTTACAGGCTTCT 58.840 50.000 0.00 0.00 38.16 2.85
34 35 1.135859 CGCTGCTTTTACAGGCTTCTG 60.136 52.381 0.00 0.00 43.84 3.02
35 36 1.200948 GCTGCTTTTACAGGCTTCTGG 59.799 52.381 0.00 0.00 42.60 3.86
36 37 2.783135 CTGCTTTTACAGGCTTCTGGA 58.217 47.619 0.00 0.00 42.60 3.86
37 38 3.350833 CTGCTTTTACAGGCTTCTGGAT 58.649 45.455 0.00 0.00 42.60 3.41
38 39 3.760684 CTGCTTTTACAGGCTTCTGGATT 59.239 43.478 0.00 0.00 42.60 3.01
39 40 4.151883 TGCTTTTACAGGCTTCTGGATTT 58.848 39.130 0.00 0.00 42.60 2.17
40 41 5.321102 TGCTTTTACAGGCTTCTGGATTTA 58.679 37.500 0.00 0.00 42.60 1.40
41 42 5.772672 TGCTTTTACAGGCTTCTGGATTTAA 59.227 36.000 0.00 0.00 42.60 1.52
42 43 6.266558 TGCTTTTACAGGCTTCTGGATTTAAA 59.733 34.615 0.00 0.00 42.60 1.52
43 44 6.586463 GCTTTTACAGGCTTCTGGATTTAAAC 59.414 38.462 0.00 0.00 42.60 2.01
44 45 7.589958 TTTTACAGGCTTCTGGATTTAAACA 57.410 32.000 0.00 0.00 42.60 2.83
45 46 7.589958 TTTACAGGCTTCTGGATTTAAACAA 57.410 32.000 0.00 0.00 42.60 2.83
46 47 5.712152 ACAGGCTTCTGGATTTAAACAAG 57.288 39.130 0.00 0.00 42.60 3.16
47 48 5.140454 ACAGGCTTCTGGATTTAAACAAGT 58.860 37.500 0.00 0.00 42.60 3.16
48 49 5.598417 ACAGGCTTCTGGATTTAAACAAGTT 59.402 36.000 0.00 0.00 42.60 2.66
49 50 6.098266 ACAGGCTTCTGGATTTAAACAAGTTT 59.902 34.615 3.47 3.47 42.60 2.66
50 51 7.286775 ACAGGCTTCTGGATTTAAACAAGTTTA 59.713 33.333 1.46 1.46 42.60 2.01
51 52 7.595130 CAGGCTTCTGGATTTAAACAAGTTTAC 59.405 37.037 4.97 0.00 33.83 2.01
52 53 7.505923 AGGCTTCTGGATTTAAACAAGTTTACT 59.494 33.333 4.97 0.00 35.05 2.24
53 54 7.808381 GGCTTCTGGATTTAAACAAGTTTACTC 59.192 37.037 4.97 5.68 35.05 2.59
54 55 8.568794 GCTTCTGGATTTAAACAAGTTTACTCT 58.431 33.333 4.97 0.00 35.05 3.24
55 56 9.884465 CTTCTGGATTTAAACAAGTTTACTCTG 57.116 33.333 4.97 4.39 35.05 3.35
56 57 7.871853 TCTGGATTTAAACAAGTTTACTCTGC 58.128 34.615 4.97 0.57 35.05 4.26
57 58 7.719633 TCTGGATTTAAACAAGTTTACTCTGCT 59.280 33.333 4.97 0.00 35.05 4.24
58 59 8.911918 TGGATTTAAACAAGTTTACTCTGCTA 57.088 30.769 4.97 0.00 35.05 3.49
59 60 9.344772 TGGATTTAAACAAGTTTACTCTGCTAA 57.655 29.630 4.97 0.00 35.05 3.09
60 61 9.827411 GGATTTAAACAAGTTTACTCTGCTAAG 57.173 33.333 4.97 0.00 35.05 2.18
63 64 6.526566 AAACAAGTTTACTCTGCTAAGACG 57.473 37.500 0.00 0.00 0.00 4.18
64 65 4.557205 ACAAGTTTACTCTGCTAAGACGG 58.443 43.478 0.00 0.00 0.00 4.79
65 66 4.280174 ACAAGTTTACTCTGCTAAGACGGA 59.720 41.667 0.00 0.00 0.00 4.69
66 67 4.705337 AGTTTACTCTGCTAAGACGGAG 57.295 45.455 0.00 0.00 46.62 4.63
67 68 3.444388 AGTTTACTCTGCTAAGACGGAGG 59.556 47.826 5.44 0.00 45.69 4.30
68 69 1.390565 TACTCTGCTAAGACGGAGGC 58.609 55.000 5.44 0.00 45.69 4.70
69 70 0.323908 ACTCTGCTAAGACGGAGGCT 60.324 55.000 5.44 0.00 45.69 4.58
70 71 1.064611 ACTCTGCTAAGACGGAGGCTA 60.065 52.381 5.44 0.00 45.69 3.93
71 72 2.025155 CTCTGCTAAGACGGAGGCTAA 58.975 52.381 0.00 0.00 39.07 3.09
72 73 2.025155 TCTGCTAAGACGGAGGCTAAG 58.975 52.381 0.00 0.00 0.00 2.18
73 74 2.025155 CTGCTAAGACGGAGGCTAAGA 58.975 52.381 0.00 0.00 0.00 2.10
74 75 2.025155 TGCTAAGACGGAGGCTAAGAG 58.975 52.381 0.00 0.00 0.00 2.85
75 76 1.338655 GCTAAGACGGAGGCTAAGAGG 59.661 57.143 0.00 0.00 0.00 3.69
76 77 1.338655 CTAAGACGGAGGCTAAGAGGC 59.661 57.143 0.00 0.00 41.73 4.70
77 78 1.668101 AAGACGGAGGCTAAGAGGCG 61.668 60.000 0.00 0.00 46.58 5.52
78 79 3.140225 GACGGAGGCTAAGAGGCGG 62.140 68.421 0.00 0.00 46.58 6.13
79 80 4.593864 CGGAGGCTAAGAGGCGGC 62.594 72.222 0.00 0.00 46.58 6.53
80 81 3.157949 GGAGGCTAAGAGGCGGCT 61.158 66.667 13.09 13.09 46.58 5.52
81 82 1.833049 GGAGGCTAAGAGGCGGCTA 60.833 63.158 13.24 0.00 46.58 3.93
82 83 1.364536 GAGGCTAAGAGGCGGCTAC 59.635 63.158 13.24 5.85 46.58 3.58
83 84 2.027751 GGCTAAGAGGCGGCTACG 59.972 66.667 13.24 1.38 44.63 3.51
84 85 2.487532 GGCTAAGAGGCGGCTACGA 61.488 63.158 13.24 0.00 44.60 3.43
85 86 1.008309 GCTAAGAGGCGGCTACGAG 60.008 63.158 13.24 10.32 44.60 4.18
86 87 1.726533 GCTAAGAGGCGGCTACGAGT 61.727 60.000 13.24 0.00 44.60 4.18
87 88 0.739561 CTAAGAGGCGGCTACGAGTT 59.260 55.000 13.24 3.37 44.60 3.01
88 89 1.134560 CTAAGAGGCGGCTACGAGTTT 59.865 52.381 13.24 2.67 44.60 2.66
89 90 0.320697 AAGAGGCGGCTACGAGTTTT 59.679 50.000 13.24 0.00 44.60 2.43
90 91 0.389948 AGAGGCGGCTACGAGTTTTG 60.390 55.000 13.24 0.00 44.60 2.44
91 92 1.967597 GAGGCGGCTACGAGTTTTGC 61.968 60.000 13.24 0.00 44.60 3.68
92 93 2.033194 GGCGGCTACGAGTTTTGCT 61.033 57.895 0.00 0.00 44.60 3.91
93 94 1.420312 GCGGCTACGAGTTTTGCTC 59.580 57.895 0.00 0.00 44.60 4.26
94 95 1.289109 GCGGCTACGAGTTTTGCTCA 61.289 55.000 0.00 0.00 44.33 4.26
95 96 0.438830 CGGCTACGAGTTTTGCTCAC 59.561 55.000 0.00 0.00 44.33 3.51
96 97 0.438830 GGCTACGAGTTTTGCTCACG 59.561 55.000 0.00 0.00 44.33 4.35
97 98 0.438830 GCTACGAGTTTTGCTCACGG 59.561 55.000 0.00 0.00 44.33 4.94
98 99 0.438830 CTACGAGTTTTGCTCACGGC 59.561 55.000 0.00 0.00 44.33 5.68
99 100 1.279527 TACGAGTTTTGCTCACGGCG 61.280 55.000 4.80 4.80 44.33 6.46
100 101 2.127232 GAGTTTTGCTCACGGCGC 60.127 61.111 6.90 0.00 45.43 6.53
101 102 3.911155 GAGTTTTGCTCACGGCGCG 62.911 63.158 6.90 0.00 45.43 6.86
102 103 4.007940 GTTTTGCTCACGGCGCGA 62.008 61.111 12.10 0.62 45.43 5.87
103 104 3.047280 TTTTGCTCACGGCGCGAT 61.047 55.556 12.10 0.00 45.43 4.58
104 105 3.307505 TTTTGCTCACGGCGCGATG 62.308 57.895 12.10 4.40 45.43 3.84
114 115 4.081030 GCGCGATGCCGATGGATG 62.081 66.667 12.10 0.00 38.22 3.51
115 116 4.081030 CGCGATGCCGATGGATGC 62.081 66.667 0.00 0.00 38.22 3.91
116 117 2.974148 GCGATGCCGATGGATGCA 60.974 61.111 0.00 0.00 42.52 3.96
117 118 2.545596 GCGATGCCGATGGATGCAA 61.546 57.895 0.00 0.00 41.50 4.08
118 119 2.024117 CGATGCCGATGGATGCAAA 58.976 52.632 0.00 0.00 41.50 3.68
119 120 0.381445 CGATGCCGATGGATGCAAAA 59.619 50.000 0.00 0.00 41.50 2.44
120 121 1.598676 CGATGCCGATGGATGCAAAAG 60.599 52.381 0.00 0.00 41.50 2.27
121 122 0.748450 ATGCCGATGGATGCAAAAGG 59.252 50.000 0.00 0.00 41.50 3.11
122 123 1.321805 TGCCGATGGATGCAAAAGGG 61.322 55.000 0.00 0.00 33.87 3.95
123 124 1.037030 GCCGATGGATGCAAAAGGGA 61.037 55.000 0.00 0.00 0.00 4.20
124 125 1.027357 CCGATGGATGCAAAAGGGAG 58.973 55.000 0.00 0.00 0.00 4.30
125 126 1.408683 CCGATGGATGCAAAAGGGAGA 60.409 52.381 0.00 0.00 0.00 3.71
126 127 2.368439 CGATGGATGCAAAAGGGAGAA 58.632 47.619 0.00 0.00 0.00 2.87
127 128 2.357009 CGATGGATGCAAAAGGGAGAAG 59.643 50.000 0.00 0.00 0.00 2.85
128 129 2.220653 TGGATGCAAAAGGGAGAAGG 57.779 50.000 0.00 0.00 0.00 3.46
129 130 0.820226 GGATGCAAAAGGGAGAAGGC 59.180 55.000 0.00 0.00 0.00 4.35
130 131 1.618074 GGATGCAAAAGGGAGAAGGCT 60.618 52.381 0.00 0.00 0.00 4.58
131 132 2.174360 GATGCAAAAGGGAGAAGGCTT 58.826 47.619 0.00 0.00 0.00 4.35
132 133 1.620822 TGCAAAAGGGAGAAGGCTTC 58.379 50.000 19.53 19.53 0.00 3.86
133 134 0.523519 GCAAAAGGGAGAAGGCTTCG 59.476 55.000 20.78 5.93 34.02 3.79
134 135 1.168714 CAAAAGGGAGAAGGCTTCGG 58.831 55.000 20.78 2.02 34.02 4.30
135 136 0.609406 AAAAGGGAGAAGGCTTCGGC 60.609 55.000 20.78 16.34 40.88 5.54
136 137 1.779061 AAAGGGAGAAGGCTTCGGCA 61.779 55.000 20.78 0.00 43.96 5.69
137 138 1.566298 AAGGGAGAAGGCTTCGGCAT 61.566 55.000 20.78 3.92 43.96 4.40
138 139 1.524849 GGGAGAAGGCTTCGGCATC 60.525 63.158 20.78 12.82 43.96 3.91
139 140 1.524849 GGAGAAGGCTTCGGCATCC 60.525 63.158 20.78 17.64 43.96 3.51
140 141 1.524849 GAGAAGGCTTCGGCATCCC 60.525 63.158 20.78 0.00 43.96 3.85
141 142 2.257409 GAGAAGGCTTCGGCATCCCA 62.257 60.000 20.78 0.00 43.96 4.37
142 143 1.378514 GAAGGCTTCGGCATCCCAA 60.379 57.895 12.12 0.00 43.96 4.12
143 144 0.965363 GAAGGCTTCGGCATCCCAAA 60.965 55.000 12.12 0.00 43.96 3.28
144 145 0.541764 AAGGCTTCGGCATCCCAAAA 60.542 50.000 0.00 0.00 43.96 2.44
145 146 0.541764 AGGCTTCGGCATCCCAAAAA 60.542 50.000 0.00 0.00 43.96 1.94
146 147 0.108662 GGCTTCGGCATCCCAAAAAG 60.109 55.000 0.00 0.00 43.96 2.27
147 148 0.603065 GCTTCGGCATCCCAAAAAGT 59.397 50.000 0.00 0.00 41.33 2.66
148 149 1.000843 GCTTCGGCATCCCAAAAAGTT 59.999 47.619 0.00 0.00 41.33 2.66
149 150 2.230266 GCTTCGGCATCCCAAAAAGTTA 59.770 45.455 0.00 0.00 41.33 2.24
150 151 3.119137 GCTTCGGCATCCCAAAAAGTTAT 60.119 43.478 0.00 0.00 41.33 1.89
151 152 4.097286 GCTTCGGCATCCCAAAAAGTTATA 59.903 41.667 0.00 0.00 41.33 0.98
152 153 5.221244 GCTTCGGCATCCCAAAAAGTTATAT 60.221 40.000 0.00 0.00 41.33 0.86
153 154 5.766150 TCGGCATCCCAAAAAGTTATATG 57.234 39.130 0.00 0.00 0.00 1.78
154 155 5.197451 TCGGCATCCCAAAAAGTTATATGT 58.803 37.500 0.00 0.00 0.00 2.29
155 156 6.358178 TCGGCATCCCAAAAAGTTATATGTA 58.642 36.000 0.00 0.00 0.00 2.29
156 157 7.001674 TCGGCATCCCAAAAAGTTATATGTAT 58.998 34.615 0.00 0.00 0.00 2.29
157 158 7.504238 TCGGCATCCCAAAAAGTTATATGTATT 59.496 33.333 0.00 0.00 0.00 1.89
158 159 8.141268 CGGCATCCCAAAAAGTTATATGTATTT 58.859 33.333 0.00 0.00 0.00 1.40
159 160 9.830975 GGCATCCCAAAAAGTTATATGTATTTT 57.169 29.630 0.00 0.00 0.00 1.82
194 195 4.473477 AGATATATTTCTACGGGCCTGC 57.527 45.455 12.89 0.00 0.00 4.85
195 196 3.197983 AGATATATTTCTACGGGCCTGCC 59.802 47.826 12.89 0.00 0.00 4.85
251 252 7.694388 AAGAAAAGTTTAAGCATCGTTTTCC 57.306 32.000 9.41 0.00 35.45 3.13
255 256 8.487313 AAAAGTTTAAGCATCGTTTTCCTTTT 57.513 26.923 0.00 0.00 0.00 2.27
291 292 0.529773 TTGCACACGAAGAGAACGCT 60.530 50.000 0.00 0.00 0.00 5.07
295 303 0.318784 ACACGAAGAGAACGCTGGAC 60.319 55.000 0.00 0.00 0.00 4.02
360 368 3.994392 GACGAAGAACCACTAATGAAGCA 59.006 43.478 0.00 0.00 0.00 3.91
393 401 9.407380 TGCATGTTGAATTTTGTATATACTCCT 57.593 29.630 13.89 0.00 0.00 3.69
417 425 3.663995 TGACAATGACCAGCCAAATTG 57.336 42.857 0.00 0.00 36.35 2.32
418 426 2.288948 TGACAATGACCAGCCAAATTGC 60.289 45.455 0.00 0.00 34.13 3.56
419 427 1.693062 ACAATGACCAGCCAAATTGCA 59.307 42.857 0.00 0.00 34.13 4.08
421 429 2.739913 CAATGACCAGCCAAATTGCAAG 59.260 45.455 4.94 0.00 0.00 4.01
422 430 1.702182 TGACCAGCCAAATTGCAAGA 58.298 45.000 4.94 0.00 0.00 3.02
423 431 2.037901 TGACCAGCCAAATTGCAAGAA 58.962 42.857 4.94 0.00 0.00 2.52
424 432 2.433604 TGACCAGCCAAATTGCAAGAAA 59.566 40.909 4.94 0.00 0.00 2.52
446 471 1.200716 ACTGATTGCAACTGCCAATCG 59.799 47.619 0.00 13.55 39.32 3.34
543 571 1.626654 CGCGGGCTCTAACACACAAG 61.627 60.000 0.00 0.00 0.00 3.16
547 575 2.615493 CGGGCTCTAACACACAAGGAAT 60.615 50.000 0.00 0.00 0.00 3.01
564 592 9.229784 CACAAGGAATTAATGAATCAATTCGAG 57.770 33.333 0.00 0.00 40.50 4.04
606 634 3.742248 CTCCCTCCCCCTCCTCGTC 62.742 73.684 0.00 0.00 0.00 4.20
628 656 4.464244 TCGTCACATCTTCTTCTTCATCCT 59.536 41.667 0.00 0.00 0.00 3.24
630 658 5.394005 CGTCACATCTTCTTCTTCATCCTCT 60.394 44.000 0.00 0.00 0.00 3.69
946 1032 0.325933 TCATGCACAACCTCCTCCAG 59.674 55.000 0.00 0.00 0.00 3.86
960 1046 1.072965 CCTCCAGCCAAAGTTCAGACT 59.927 52.381 0.00 0.00 37.87 3.24
962 1048 2.810852 CTCCAGCCAAAGTTCAGACTTC 59.189 50.000 0.00 0.00 45.18 3.01
963 1049 2.172505 TCCAGCCAAAGTTCAGACTTCA 59.827 45.455 0.00 0.00 45.18 3.02
964 1050 2.551459 CCAGCCAAAGTTCAGACTTCAG 59.449 50.000 0.00 0.00 45.18 3.02
965 1051 3.470709 CAGCCAAAGTTCAGACTTCAGA 58.529 45.455 0.00 0.00 45.18 3.27
966 1052 3.249559 CAGCCAAAGTTCAGACTTCAGAC 59.750 47.826 0.00 0.00 45.18 3.51
967 1053 2.550180 GCCAAAGTTCAGACTTCAGACC 59.450 50.000 0.00 0.00 45.18 3.85
968 1054 3.808728 CCAAAGTTCAGACTTCAGACCA 58.191 45.455 0.00 0.00 45.18 4.02
969 1055 3.812053 CCAAAGTTCAGACTTCAGACCAG 59.188 47.826 0.00 0.00 45.18 4.00
970 1056 4.443457 CCAAAGTTCAGACTTCAGACCAGA 60.443 45.833 0.00 0.00 45.18 3.86
971 1057 4.329462 AAGTTCAGACTTCAGACCAGAC 57.671 45.455 0.00 0.00 42.35 3.51
972 1058 2.630580 AGTTCAGACTTCAGACCAGACC 59.369 50.000 0.00 0.00 29.87 3.85
973 1059 2.365617 GTTCAGACTTCAGACCAGACCA 59.634 50.000 0.00 0.00 0.00 4.02
974 1060 2.242926 TCAGACTTCAGACCAGACCAG 58.757 52.381 0.00 0.00 0.00 4.00
975 1061 2.158460 TCAGACTTCAGACCAGACCAGA 60.158 50.000 0.00 0.00 0.00 3.86
976 1062 2.230992 CAGACTTCAGACCAGACCAGAG 59.769 54.545 0.00 0.00 0.00 3.35
977 1063 2.109128 AGACTTCAGACCAGACCAGAGA 59.891 50.000 0.00 0.00 0.00 3.10
978 1064 2.491693 GACTTCAGACCAGACCAGAGAG 59.508 54.545 0.00 0.00 0.00 3.20
979 1065 2.109128 ACTTCAGACCAGACCAGAGAGA 59.891 50.000 0.00 0.00 0.00 3.10
980 1066 2.505650 TCAGACCAGACCAGAGAGAG 57.494 55.000 0.00 0.00 0.00 3.20
981 1067 1.988846 TCAGACCAGACCAGAGAGAGA 59.011 52.381 0.00 0.00 0.00 3.10
982 1068 2.026356 TCAGACCAGACCAGAGAGAGAG 60.026 54.545 0.00 0.00 0.00 3.20
1725 1843 1.153469 GAGGCCGGAGAAGCAAGAG 60.153 63.158 5.05 0.00 0.00 2.85
1848 1969 1.515020 GCCGATCTGTCAGCTGTCT 59.485 57.895 14.67 0.00 0.00 3.41
1863 1989 2.619147 CTGTCTTGCAGGTCTCTCATG 58.381 52.381 0.00 0.00 41.42 3.07
1904 2033 3.983494 CCGGCGGCGAGATCTCAT 61.983 66.667 34.49 0.00 0.00 2.90
1905 2034 2.429907 CGGCGGCGAGATCTCATC 60.430 66.667 29.19 12.66 0.00 2.92
1920 2052 7.197901 AGATCTCATCATCTTGAGGTTTCTT 57.802 36.000 0.00 0.00 42.78 2.52
1926 2058 2.910688 TCTTGAGGTTTCTTGCTCGT 57.089 45.000 0.00 0.00 0.00 4.18
1947 2079 2.122783 TTAGGGTCCATTTTCTGCCG 57.877 50.000 0.00 0.00 0.00 5.69
2035 2179 1.680735 AGCGGATGTCAGAGATGAGAC 59.319 52.381 0.00 0.00 35.37 3.36
2051 2195 3.067106 TGAGACGAGTGGATTTTGAAGC 58.933 45.455 0.00 0.00 0.00 3.86
2058 2202 4.406943 GAGTGGATTTTGAAGCGTTGATC 58.593 43.478 0.00 0.00 0.00 2.92
2147 2296 3.713826 TTCTTGTGGTGGGTAATCCTC 57.286 47.619 0.00 0.00 36.20 3.71
2156 2305 4.227754 TGGTGGGTAATCCTCGGATTTAAA 59.772 41.667 15.75 0.00 41.55 1.52
2157 2306 4.820173 GGTGGGTAATCCTCGGATTTAAAG 59.180 45.833 15.75 0.00 41.55 1.85
2158 2307 5.434408 GTGGGTAATCCTCGGATTTAAAGT 58.566 41.667 15.75 0.00 41.55 2.66
2159 2308 6.408434 GGTGGGTAATCCTCGGATTTAAAGTA 60.408 42.308 15.75 0.00 41.55 2.24
2160 2309 6.481313 GTGGGTAATCCTCGGATTTAAAGTAC 59.519 42.308 15.75 7.33 41.55 2.73
2161 2310 6.384886 TGGGTAATCCTCGGATTTAAAGTACT 59.615 38.462 15.75 0.00 41.55 2.73
2162 2311 6.927936 GGGTAATCCTCGGATTTAAAGTACTC 59.072 42.308 15.75 4.19 41.55 2.59
2163 2312 6.927936 GGTAATCCTCGGATTTAAAGTACTCC 59.072 42.308 15.75 0.00 41.55 3.85
2164 2313 5.548181 ATCCTCGGATTTAAAGTACTCCC 57.452 43.478 0.00 0.00 0.00 4.30
2165 2314 4.617593 TCCTCGGATTTAAAGTACTCCCT 58.382 43.478 0.00 0.00 0.00 4.20
2166 2315 4.648307 TCCTCGGATTTAAAGTACTCCCTC 59.352 45.833 0.00 0.00 0.00 4.30
2167 2316 4.202233 CCTCGGATTTAAAGTACTCCCTCC 60.202 50.000 0.00 0.00 0.00 4.30
2168 2317 4.617593 TCGGATTTAAAGTACTCCCTCCT 58.382 43.478 0.00 0.00 0.00 3.69
2169 2318 5.028131 TCGGATTTAAAGTACTCCCTCCTT 58.972 41.667 0.00 0.00 0.00 3.36
2170 2319 5.128335 TCGGATTTAAAGTACTCCCTCCTTC 59.872 44.000 0.00 0.00 0.00 3.46
2171 2320 5.128991 CGGATTTAAAGTACTCCCTCCTTCT 59.871 44.000 0.00 0.00 0.00 2.85
2172 2321 6.584488 GGATTTAAAGTACTCCCTCCTTCTC 58.416 44.000 0.00 0.00 0.00 2.87
2173 2322 6.156429 GGATTTAAAGTACTCCCTCCTTCTCA 59.844 42.308 0.00 0.00 0.00 3.27
2174 2323 7.147461 GGATTTAAAGTACTCCCTCCTTCTCAT 60.147 40.741 0.00 0.00 0.00 2.90
2175 2324 8.855804 ATTTAAAGTACTCCCTCCTTCTCATA 57.144 34.615 0.00 0.00 0.00 2.15
2176 2325 8.674925 TTTAAAGTACTCCCTCCTTCTCATAA 57.325 34.615 0.00 0.00 0.00 1.90
2177 2326 8.855804 TTAAAGTACTCCCTCCTTCTCATAAT 57.144 34.615 0.00 0.00 0.00 1.28
2178 2327 9.947189 TTAAAGTACTCCCTCCTTCTCATAATA 57.053 33.333 0.00 0.00 0.00 0.98
2182 2331 9.762381 AGTACTCCCTCCTTCTCATAATATAAG 57.238 37.037 0.00 0.00 0.00 1.73
2183 2332 9.756571 GTACTCCCTCCTTCTCATAATATAAGA 57.243 37.037 0.00 0.00 0.00 2.10
2185 2334 9.095700 ACTCCCTCCTTCTCATAATATAAGAAC 57.904 37.037 0.00 0.00 0.00 3.01
2186 2335 8.123639 TCCCTCCTTCTCATAATATAAGAACG 57.876 38.462 0.00 0.00 0.00 3.95
2187 2336 7.728981 TCCCTCCTTCTCATAATATAAGAACGT 59.271 37.037 0.00 0.00 0.00 3.99
2188 2337 8.368668 CCCTCCTTCTCATAATATAAGAACGTT 58.631 37.037 0.00 0.00 0.00 3.99
2189 2338 9.765795 CCTCCTTCTCATAATATAAGAACGTTT 57.234 33.333 0.46 0.00 0.00 3.60
2203 2352 8.876275 ATAAGAACGTTTTTGACACTAGTGTA 57.124 30.769 27.98 11.50 45.05 2.90
2204 2353 6.823678 AGAACGTTTTTGACACTAGTGTAG 57.176 37.500 27.98 14.79 45.05 2.74
2205 2354 6.335777 AGAACGTTTTTGACACTAGTGTAGT 58.664 36.000 27.98 15.35 45.05 2.73
2275 2443 6.202379 CGATATGGTTAAGTCTCAGTCGAGTA 59.798 42.308 0.00 0.00 40.44 2.59
2399 2568 9.153721 TCGAGGTTACAAATAAATGAAATACGT 57.846 29.630 0.00 0.00 0.00 3.57
2421 2590 2.139888 AATGCAATTGCGCACGGTCA 62.140 50.000 24.58 6.84 46.56 4.02
2443 2612 0.533308 GGTTTGTCACGCCCAGTACA 60.533 55.000 0.00 0.00 0.00 2.90
2458 2627 1.152735 TACAGGGCCTAGGCGAGAG 60.153 63.158 27.24 18.27 43.06 3.20
2460 2629 2.197324 AGGGCCTAGGCGAGAGAG 59.803 66.667 27.24 0.00 43.06 3.20
2461 2630 2.196229 GGGCCTAGGCGAGAGAGA 59.804 66.667 27.24 0.00 43.06 3.10
2463 2632 1.454111 GGCCTAGGCGAGAGAGACA 60.454 63.158 27.24 0.00 43.06 3.41
2471 2640 4.104417 GAGAGAGACACCGCGCGT 62.104 66.667 29.95 14.24 0.00 6.01
2482 2651 0.382873 ACCGCGCGTCTATACATCAA 59.617 50.000 29.95 0.00 0.00 2.57
2483 2652 1.053048 CCGCGCGTCTATACATCAAG 58.947 55.000 29.95 4.04 0.00 3.02
2484 2653 1.599667 CCGCGCGTCTATACATCAAGT 60.600 52.381 29.95 0.00 0.00 3.16
2491 2660 3.467803 GTCTATACATCAAGTGTGGCCC 58.532 50.000 0.00 0.00 42.24 5.80
2495 2664 2.897271 ACATCAAGTGTGGCCCATAA 57.103 45.000 0.00 0.00 40.28 1.90
2507 2676 0.663153 GCCCATAATCACGCAAGGTC 59.337 55.000 0.00 0.00 46.39 3.85
2508 2677 2.016604 GCCCATAATCACGCAAGGTCA 61.017 52.381 0.00 0.00 46.39 4.02
2509 2678 2.575532 CCCATAATCACGCAAGGTCAT 58.424 47.619 0.00 0.00 46.39 3.06
2607 2785 9.357652 CAACTAAATACATTGCATTTGCTAGTT 57.642 29.630 3.94 4.74 42.66 2.24
2649 2827 7.313951 CAAGCCTATTACTTGAAGGAGAAAG 57.686 40.000 0.00 0.00 45.99 2.62
2650 2828 5.995446 AGCCTATTACTTGAAGGAGAAAGG 58.005 41.667 0.00 0.00 31.64 3.11
2651 2829 5.489278 AGCCTATTACTTGAAGGAGAAAGGT 59.511 40.000 0.00 0.00 31.64 3.50
2652 2830 5.586643 GCCTATTACTTGAAGGAGAAAGGTG 59.413 44.000 0.00 0.00 31.64 4.00
2653 2831 6.712276 CCTATTACTTGAAGGAGAAAGGTGT 58.288 40.000 0.00 0.00 31.64 4.16
2654 2832 6.595716 CCTATTACTTGAAGGAGAAAGGTGTG 59.404 42.308 0.00 0.00 31.64 3.82
2655 2833 5.623956 TTACTTGAAGGAGAAAGGTGTGA 57.376 39.130 0.00 0.00 0.00 3.58
2656 2834 3.809905 ACTTGAAGGAGAAAGGTGTGAC 58.190 45.455 0.00 0.00 0.00 3.67
2657 2835 3.199946 ACTTGAAGGAGAAAGGTGTGACA 59.800 43.478 0.00 0.00 0.00 3.58
2658 2836 3.475566 TGAAGGAGAAAGGTGTGACAG 57.524 47.619 0.00 0.00 0.00 3.51
2659 2837 2.147150 GAAGGAGAAAGGTGTGACAGC 58.853 52.381 6.68 6.68 0.00 4.40
2660 2838 1.428869 AGGAGAAAGGTGTGACAGCT 58.571 50.000 12.08 12.08 44.48 4.24
2661 2839 1.346068 AGGAGAAAGGTGTGACAGCTC 59.654 52.381 18.37 6.84 41.59 4.09
2662 2840 1.609320 GGAGAAAGGTGTGACAGCTCC 60.609 57.143 18.37 11.14 41.59 4.70
2663 2841 1.346068 GAGAAAGGTGTGACAGCTCCT 59.654 52.381 18.37 16.95 41.59 3.69
2664 2842 1.071385 AGAAAGGTGTGACAGCTCCTG 59.929 52.381 18.37 0.00 41.59 3.86
2665 2843 0.109342 AAAGGTGTGACAGCTCCTGG 59.891 55.000 18.37 0.00 41.59 4.45
2666 2844 1.772819 AAGGTGTGACAGCTCCTGGG 61.773 60.000 18.37 0.00 41.59 4.45
2667 2845 2.520536 GGTGTGACAGCTCCTGGGT 61.521 63.158 7.64 0.00 35.51 4.51
2669 2847 2.359230 GTGACAGCTCCTGGGTGC 60.359 66.667 5.64 5.64 46.30 5.01
2670 2848 3.640407 TGACAGCTCCTGGGTGCC 61.640 66.667 9.66 0.00 46.30 5.01
2671 2849 3.325753 GACAGCTCCTGGGTGCCT 61.326 66.667 9.66 0.00 46.30 4.75
2672 2850 1.990060 GACAGCTCCTGGGTGCCTA 60.990 63.158 9.66 0.00 46.30 3.93
2673 2851 1.965754 GACAGCTCCTGGGTGCCTAG 61.966 65.000 9.66 0.00 46.30 3.02
2674 2852 2.366167 AGCTCCTGGGTGCCTAGG 60.366 66.667 13.74 13.74 35.48 3.02
2675 2853 4.182433 GCTCCTGGGTGCCTAGGC 62.182 72.222 27.71 27.71 42.35 3.93
2688 2866 3.404224 GCCTAGGCACCCTCTATAAAC 57.596 52.381 29.33 0.00 41.49 2.01
2689 2867 2.704065 GCCTAGGCACCCTCTATAAACA 59.296 50.000 29.33 0.00 41.49 2.83
2690 2868 3.244249 GCCTAGGCACCCTCTATAAACAG 60.244 52.174 29.33 0.00 41.49 3.16
2691 2869 3.967987 CCTAGGCACCCTCTATAAACAGT 59.032 47.826 0.00 0.00 34.61 3.55
2692 2870 5.145564 CCTAGGCACCCTCTATAAACAGTA 58.854 45.833 0.00 0.00 34.61 2.74
2693 2871 5.601313 CCTAGGCACCCTCTATAAACAGTAA 59.399 44.000 0.00 0.00 34.61 2.24
2694 2872 5.354842 AGGCACCCTCTATAAACAGTAAC 57.645 43.478 0.00 0.00 0.00 2.50
2695 2873 4.781087 AGGCACCCTCTATAAACAGTAACA 59.219 41.667 0.00 0.00 0.00 2.41
2696 2874 5.428783 AGGCACCCTCTATAAACAGTAACAT 59.571 40.000 0.00 0.00 0.00 2.71
2697 2875 6.614087 AGGCACCCTCTATAAACAGTAACATA 59.386 38.462 0.00 0.00 0.00 2.29
2698 2876 7.126726 AGGCACCCTCTATAAACAGTAACATAA 59.873 37.037 0.00 0.00 0.00 1.90
2699 2877 7.771826 GGCACCCTCTATAAACAGTAACATAAA 59.228 37.037 0.00 0.00 0.00 1.40
2700 2878 9.169592 GCACCCTCTATAAACAGTAACATAAAA 57.830 33.333 0.00 0.00 0.00 1.52
2749 2927 9.956720 ATCAGAAACTTTACAACTTCAAAGATG 57.043 29.630 0.00 0.00 35.70 2.90
2750 2928 9.173021 TCAGAAACTTTACAACTTCAAAGATGA 57.827 29.630 6.98 0.00 35.70 2.92
2751 2929 9.956720 CAGAAACTTTACAACTTCAAAGATGAT 57.043 29.630 6.98 0.00 35.70 2.45
2753 2931 9.950680 GAAACTTTACAACTTCAAAGATGATCA 57.049 29.630 0.00 0.00 35.70 2.92
2756 2934 9.736023 ACTTTACAACTTCAAAGATGATCAAAC 57.264 29.630 0.00 0.00 35.70 2.93
2757 2935 9.956720 CTTTACAACTTCAAAGATGATCAAACT 57.043 29.630 0.00 0.00 34.96 2.66
2760 2938 8.638685 ACAACTTCAAAGATGATCAAACTTTG 57.361 30.769 31.00 31.00 46.42 2.77
2761 2939 8.253113 ACAACTTCAAAGATGATCAAACTTTGT 58.747 29.630 32.77 22.61 45.72 2.83
2762 2940 8.537223 CAACTTCAAAGATGATCAAACTTTGTG 58.463 33.333 32.77 29.26 45.72 3.33
2763 2941 7.999679 ACTTCAAAGATGATCAAACTTTGTGA 58.000 30.769 32.77 26.38 45.72 3.58
2764 2942 8.133627 ACTTCAAAGATGATCAAACTTTGTGAG 58.866 33.333 32.77 30.96 45.72 3.51
2765 2943 7.572523 TCAAAGATGATCAAACTTTGTGAGT 57.427 32.000 32.77 14.24 45.72 3.41
2766 2944 8.469200 TTCAAAGATGATCAAACTTTGTGAGTT 58.531 29.630 32.77 13.77 45.72 3.01
2776 2954 5.391312 AACTTTGTGAGTTCTTGCAAGTT 57.609 34.783 25.19 12.70 45.40 2.66
2777 2955 5.391312 ACTTTGTGAGTTCTTGCAAGTTT 57.609 34.783 25.19 12.36 33.92 2.66
2778 2956 5.783111 ACTTTGTGAGTTCTTGCAAGTTTT 58.217 33.333 25.19 12.01 33.92 2.43
2779 2957 5.863935 ACTTTGTGAGTTCTTGCAAGTTTTC 59.136 36.000 25.19 19.26 33.92 2.29
2780 2958 5.384063 TTGTGAGTTCTTGCAAGTTTTCA 57.616 34.783 25.19 21.25 0.00 2.69
2781 2959 5.581126 TGTGAGTTCTTGCAAGTTTTCAT 57.419 34.783 25.19 7.57 0.00 2.57
2782 2960 5.342433 TGTGAGTTCTTGCAAGTTTTCATG 58.658 37.500 25.19 0.00 0.00 3.07
2783 2961 5.105797 TGTGAGTTCTTGCAAGTTTTCATGT 60.106 36.000 25.19 3.79 0.00 3.21
2784 2962 5.456822 GTGAGTTCTTGCAAGTTTTCATGTC 59.543 40.000 25.19 12.15 0.00 3.06
2785 2963 5.125257 TGAGTTCTTGCAAGTTTTCATGTCA 59.875 36.000 25.19 14.20 0.00 3.58
2786 2964 5.964758 AGTTCTTGCAAGTTTTCATGTCAA 58.035 33.333 25.19 6.10 0.00 3.18
2787 2965 6.397272 AGTTCTTGCAAGTTTTCATGTCAAA 58.603 32.000 25.19 5.59 0.00 2.69
2788 2966 6.873076 AGTTCTTGCAAGTTTTCATGTCAAAA 59.127 30.769 25.19 5.39 0.00 2.44
2789 2967 7.550196 AGTTCTTGCAAGTTTTCATGTCAAAAT 59.450 29.630 25.19 4.93 0.00 1.82
2790 2968 8.816144 GTTCTTGCAAGTTTTCATGTCAAAATA 58.184 29.630 25.19 0.00 0.00 1.40
2791 2969 9.545105 TTCTTGCAAGTTTTCATGTCAAAATAT 57.455 25.926 25.19 0.00 0.00 1.28
2792 2970 9.195411 TCTTGCAAGTTTTCATGTCAAAATATC 57.805 29.630 25.19 0.00 0.00 1.63
2793 2971 8.883954 TTGCAAGTTTTCATGTCAAAATATCA 57.116 26.923 0.00 0.00 0.00 2.15
2794 2972 9.491675 TTGCAAGTTTTCATGTCAAAATATCAT 57.508 25.926 0.00 0.00 0.00 2.45
2795 2973 8.927721 TGCAAGTTTTCATGTCAAAATATCATG 58.072 29.630 0.00 0.00 39.87 3.07
2796 2974 8.928733 GCAAGTTTTCATGTCAAAATATCATGT 58.071 29.630 0.00 0.00 39.61 3.21
2806 2984 9.911788 ATGTCAAAATATCATGTAGAGAAAGGT 57.088 29.630 0.00 0.00 0.00 3.50
2807 2985 9.166173 TGTCAAAATATCATGTAGAGAAAGGTG 57.834 33.333 0.00 0.00 0.00 4.00
2808 2986 9.167311 GTCAAAATATCATGTAGAGAAAGGTGT 57.833 33.333 0.00 0.00 0.00 4.16
2811 2989 8.873215 AAATATCATGTAGAGAAAGGTGTACG 57.127 34.615 0.00 0.00 0.00 3.67
2812 2990 7.818997 ATATCATGTAGAGAAAGGTGTACGA 57.181 36.000 0.00 0.00 0.00 3.43
2813 2991 5.970317 TCATGTAGAGAAAGGTGTACGAA 57.030 39.130 0.00 0.00 0.00 3.85
2814 2992 6.525578 TCATGTAGAGAAAGGTGTACGAAT 57.474 37.500 0.00 0.00 0.00 3.34
2815 2993 6.931838 TCATGTAGAGAAAGGTGTACGAATT 58.068 36.000 0.00 0.00 0.00 2.17
2816 2994 8.058667 TCATGTAGAGAAAGGTGTACGAATTA 57.941 34.615 0.00 0.00 0.00 1.40
2817 2995 8.188799 TCATGTAGAGAAAGGTGTACGAATTAG 58.811 37.037 0.00 0.00 0.00 1.73
2818 2996 7.458409 TGTAGAGAAAGGTGTACGAATTAGT 57.542 36.000 0.00 0.00 0.00 2.24
2819 2997 7.889469 TGTAGAGAAAGGTGTACGAATTAGTT 58.111 34.615 0.00 0.00 0.00 2.24
2820 2998 8.362639 TGTAGAGAAAGGTGTACGAATTAGTTT 58.637 33.333 0.00 0.00 0.00 2.66
2821 2999 9.201127 GTAGAGAAAGGTGTACGAATTAGTTTT 57.799 33.333 0.00 0.00 0.00 2.43
2823 3001 9.768662 AGAGAAAGGTGTACGAATTAGTTTTAA 57.231 29.630 0.00 0.00 0.00 1.52
2845 3023 9.539825 TTTAAATTTCAGTGCTAAAAATGCTCA 57.460 25.926 0.00 0.00 0.00 4.26
2846 3024 9.539825 TTAAATTTCAGTGCTAAAAATGCTCAA 57.460 25.926 0.00 0.00 0.00 3.02
2847 3025 8.436046 AAATTTCAGTGCTAAAAATGCTCAAA 57.564 26.923 0.00 0.00 0.00 2.69
2848 3026 8.436046 AATTTCAGTGCTAAAAATGCTCAAAA 57.564 26.923 0.00 0.00 0.00 2.44
2849 3027 6.826893 TTCAGTGCTAAAAATGCTCAAAAC 57.173 33.333 0.00 0.00 0.00 2.43
2850 3028 6.147864 TCAGTGCTAAAAATGCTCAAAACT 57.852 33.333 0.00 0.00 0.00 2.66
2851 3029 6.572519 TCAGTGCTAAAAATGCTCAAAACTT 58.427 32.000 0.00 0.00 0.00 2.66
2852 3030 6.697019 TCAGTGCTAAAAATGCTCAAAACTTC 59.303 34.615 0.00 0.00 0.00 3.01
2853 3031 6.476380 CAGTGCTAAAAATGCTCAAAACTTCA 59.524 34.615 0.00 0.00 0.00 3.02
2854 3032 7.010367 CAGTGCTAAAAATGCTCAAAACTTCAA 59.990 33.333 0.00 0.00 0.00 2.69
2855 3033 7.223387 AGTGCTAAAAATGCTCAAAACTTCAAG 59.777 33.333 0.00 0.00 0.00 3.02
2856 3034 6.018832 TGCTAAAAATGCTCAAAACTTCAAGC 60.019 34.615 0.00 0.00 35.31 4.01
2858 3036 6.740411 AAAAATGCTCAAAACTTCAAGCAA 57.260 29.167 0.00 0.00 46.80 3.91
2859 3037 6.930667 AAAATGCTCAAAACTTCAAGCAAT 57.069 29.167 0.00 0.00 46.80 3.56
2860 3038 5.917541 AATGCTCAAAACTTCAAGCAATG 57.082 34.783 0.00 0.00 46.80 2.82
2861 3039 4.652421 TGCTCAAAACTTCAAGCAATGA 57.348 36.364 0.00 0.00 41.50 2.57
2862 3040 5.008619 TGCTCAAAACTTCAAGCAATGAA 57.991 34.783 5.06 5.06 45.71 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.082104 CAGCGGCCGAAAAGTTGTC 60.082 57.895 33.48 7.54 0.00 3.18
1 2 3.030652 CAGCGGCCGAAAAGTTGT 58.969 55.556 33.48 0.00 0.00 3.32
2 3 2.406452 AAGCAGCGGCCGAAAAGTTG 62.406 55.000 33.48 16.60 42.56 3.16
3 4 1.734388 AAAGCAGCGGCCGAAAAGTT 61.734 50.000 33.48 13.86 42.56 2.66
4 5 1.734388 AAAAGCAGCGGCCGAAAAGT 61.734 50.000 33.48 7.39 42.56 2.66
5 6 0.239879 TAAAAGCAGCGGCCGAAAAG 59.760 50.000 33.48 15.83 42.56 2.27
6 7 0.039888 GTAAAAGCAGCGGCCGAAAA 60.040 50.000 33.48 0.74 42.56 2.29
7 8 1.167155 TGTAAAAGCAGCGGCCGAAA 61.167 50.000 33.48 0.00 42.56 3.46
8 9 1.573829 CTGTAAAAGCAGCGGCCGAA 61.574 55.000 33.48 0.00 42.56 4.30
9 10 2.031314 TGTAAAAGCAGCGGCCGA 59.969 55.556 33.48 0.69 42.56 5.54
10 11 2.480555 CTGTAAAAGCAGCGGCCG 59.519 61.111 24.05 24.05 42.56 6.13
11 12 2.877691 CCTGTAAAAGCAGCGGCC 59.122 61.111 4.82 0.00 42.56 6.13
12 13 1.866853 AAGCCTGTAAAAGCAGCGGC 61.867 55.000 0.00 0.00 41.61 6.53
13 14 0.169009 GAAGCCTGTAAAAGCAGCGG 59.831 55.000 0.00 0.00 35.28 5.52
14 15 1.135859 CAGAAGCCTGTAAAAGCAGCG 60.136 52.381 0.00 0.00 35.70 5.18
15 16 1.200948 CCAGAAGCCTGTAAAAGCAGC 59.799 52.381 0.00 0.00 38.74 5.25
16 17 2.783135 TCCAGAAGCCTGTAAAAGCAG 58.217 47.619 0.00 0.00 38.74 4.24
17 18 2.949177 TCCAGAAGCCTGTAAAAGCA 57.051 45.000 0.00 0.00 38.74 3.91
18 19 4.790765 AAATCCAGAAGCCTGTAAAAGC 57.209 40.909 0.00 0.00 38.74 3.51
19 20 7.657336 TGTTTAAATCCAGAAGCCTGTAAAAG 58.343 34.615 0.00 0.00 38.74 2.27
20 21 7.589958 TGTTTAAATCCAGAAGCCTGTAAAA 57.410 32.000 0.00 0.00 38.74 1.52
21 22 7.286775 ACTTGTTTAAATCCAGAAGCCTGTAAA 59.713 33.333 0.00 0.00 38.74 2.01
22 23 6.775629 ACTTGTTTAAATCCAGAAGCCTGTAA 59.224 34.615 0.00 0.00 38.74 2.41
23 24 6.303839 ACTTGTTTAAATCCAGAAGCCTGTA 58.696 36.000 0.00 0.00 38.74 2.74
24 25 5.140454 ACTTGTTTAAATCCAGAAGCCTGT 58.860 37.500 0.00 0.00 38.74 4.00
25 26 5.712152 ACTTGTTTAAATCCAGAAGCCTG 57.288 39.130 0.00 0.00 40.09 4.85
26 27 6.731292 AAACTTGTTTAAATCCAGAAGCCT 57.269 33.333 0.00 0.00 0.00 4.58
27 28 7.658261 AGTAAACTTGTTTAAATCCAGAAGCC 58.342 34.615 7.43 0.00 0.00 4.35
28 29 8.568794 AGAGTAAACTTGTTTAAATCCAGAAGC 58.431 33.333 7.43 0.00 0.00 3.86
29 30 9.884465 CAGAGTAAACTTGTTTAAATCCAGAAG 57.116 33.333 7.43 0.00 0.00 2.85
30 31 8.349983 GCAGAGTAAACTTGTTTAAATCCAGAA 58.650 33.333 7.43 0.00 0.00 3.02
31 32 7.719633 AGCAGAGTAAACTTGTTTAAATCCAGA 59.280 33.333 7.43 0.00 0.00 3.86
32 33 7.875971 AGCAGAGTAAACTTGTTTAAATCCAG 58.124 34.615 7.43 6.52 0.00 3.86
33 34 7.817418 AGCAGAGTAAACTTGTTTAAATCCA 57.183 32.000 7.43 0.00 0.00 3.41
34 35 9.827411 CTTAGCAGAGTAAACTTGTTTAAATCC 57.173 33.333 7.43 0.00 0.00 3.01
37 38 8.545420 CGTCTTAGCAGAGTAAACTTGTTTAAA 58.455 33.333 7.43 0.00 0.00 1.52
38 39 7.170320 CCGTCTTAGCAGAGTAAACTTGTTTAA 59.830 37.037 7.43 0.00 0.00 1.52
39 40 6.643770 CCGTCTTAGCAGAGTAAACTTGTTTA 59.356 38.462 2.22 2.22 0.00 2.01
40 41 5.465724 CCGTCTTAGCAGAGTAAACTTGTTT 59.534 40.000 4.14 4.14 0.00 2.83
41 42 4.989168 CCGTCTTAGCAGAGTAAACTTGTT 59.011 41.667 0.00 0.00 0.00 2.83
42 43 4.280174 TCCGTCTTAGCAGAGTAAACTTGT 59.720 41.667 0.00 0.00 0.00 3.16
43 44 4.806330 TCCGTCTTAGCAGAGTAAACTTG 58.194 43.478 0.00 0.00 0.00 3.16
44 45 4.082136 CCTCCGTCTTAGCAGAGTAAACTT 60.082 45.833 0.00 0.00 0.00 2.66
45 46 3.444388 CCTCCGTCTTAGCAGAGTAAACT 59.556 47.826 0.00 0.00 0.00 2.66
46 47 3.771798 CCTCCGTCTTAGCAGAGTAAAC 58.228 50.000 0.00 0.00 0.00 2.01
47 48 2.165845 GCCTCCGTCTTAGCAGAGTAAA 59.834 50.000 0.00 0.00 0.00 2.01
48 49 1.749634 GCCTCCGTCTTAGCAGAGTAA 59.250 52.381 0.00 0.00 0.00 2.24
49 50 1.064611 AGCCTCCGTCTTAGCAGAGTA 60.065 52.381 0.00 0.00 0.00 2.59
50 51 0.323908 AGCCTCCGTCTTAGCAGAGT 60.324 55.000 0.00 0.00 0.00 3.24
51 52 1.681538 TAGCCTCCGTCTTAGCAGAG 58.318 55.000 0.00 0.00 0.00 3.35
52 53 2.025155 CTTAGCCTCCGTCTTAGCAGA 58.975 52.381 0.00 0.00 0.00 4.26
53 54 2.025155 TCTTAGCCTCCGTCTTAGCAG 58.975 52.381 0.00 0.00 0.00 4.24
54 55 2.025155 CTCTTAGCCTCCGTCTTAGCA 58.975 52.381 0.00 0.00 0.00 3.49
55 56 1.338655 CCTCTTAGCCTCCGTCTTAGC 59.661 57.143 0.00 0.00 0.00 3.09
56 57 1.338655 GCCTCTTAGCCTCCGTCTTAG 59.661 57.143 0.00 0.00 0.00 2.18
57 58 1.400737 GCCTCTTAGCCTCCGTCTTA 58.599 55.000 0.00 0.00 0.00 2.10
58 59 1.668101 CGCCTCTTAGCCTCCGTCTT 61.668 60.000 0.00 0.00 0.00 3.01
59 60 2.122167 CGCCTCTTAGCCTCCGTCT 61.122 63.158 0.00 0.00 0.00 4.18
60 61 2.413765 CGCCTCTTAGCCTCCGTC 59.586 66.667 0.00 0.00 0.00 4.79
61 62 3.148279 CCGCCTCTTAGCCTCCGT 61.148 66.667 0.00 0.00 0.00 4.69
62 63 4.593864 GCCGCCTCTTAGCCTCCG 62.594 72.222 0.00 0.00 0.00 4.63
63 64 1.833049 TAGCCGCCTCTTAGCCTCC 60.833 63.158 0.00 0.00 0.00 4.30
64 65 1.364536 GTAGCCGCCTCTTAGCCTC 59.635 63.158 0.00 0.00 0.00 4.70
65 66 2.491022 CGTAGCCGCCTCTTAGCCT 61.491 63.158 0.00 0.00 0.00 4.58
66 67 2.027751 CGTAGCCGCCTCTTAGCC 59.972 66.667 0.00 0.00 0.00 3.93
67 68 1.008309 CTCGTAGCCGCCTCTTAGC 60.008 63.158 0.00 0.00 0.00 3.09
68 69 0.739561 AACTCGTAGCCGCCTCTTAG 59.260 55.000 0.00 0.00 0.00 2.18
69 70 1.180029 AAACTCGTAGCCGCCTCTTA 58.820 50.000 0.00 0.00 0.00 2.10
70 71 0.320697 AAAACTCGTAGCCGCCTCTT 59.679 50.000 0.00 0.00 0.00 2.85
71 72 0.389948 CAAAACTCGTAGCCGCCTCT 60.390 55.000 0.00 0.00 0.00 3.69
72 73 1.967597 GCAAAACTCGTAGCCGCCTC 61.968 60.000 0.00 0.00 0.00 4.70
73 74 2.033194 GCAAAACTCGTAGCCGCCT 61.033 57.895 0.00 0.00 0.00 5.52
74 75 1.967597 GAGCAAAACTCGTAGCCGCC 61.968 60.000 0.00 0.00 35.18 6.13
75 76 1.420312 GAGCAAAACTCGTAGCCGC 59.580 57.895 0.00 0.00 35.18 6.53
83 84 2.127232 GCGCCGTGAGCAAAACTC 60.127 61.111 0.00 0.00 46.45 3.01
84 85 4.012895 CGCGCCGTGAGCAAAACT 62.013 61.111 0.00 0.00 44.04 2.66
85 86 3.308878 ATCGCGCCGTGAGCAAAAC 62.309 57.895 6.49 0.00 44.04 2.43
86 87 3.047280 ATCGCGCCGTGAGCAAAA 61.047 55.556 6.49 0.00 44.04 2.44
87 88 3.787676 CATCGCGCCGTGAGCAAA 61.788 61.111 6.49 0.00 44.04 3.68
97 98 4.081030 CATCCATCGGCATCGCGC 62.081 66.667 0.00 0.00 41.28 6.86
98 99 4.081030 GCATCCATCGGCATCGCG 62.081 66.667 0.00 0.00 36.13 5.87
99 100 2.062361 TTTGCATCCATCGGCATCGC 62.062 55.000 0.00 0.00 40.17 4.58
100 101 0.381445 TTTTGCATCCATCGGCATCG 59.619 50.000 0.00 0.00 40.17 3.84
101 102 1.269413 CCTTTTGCATCCATCGGCATC 60.269 52.381 0.00 0.00 40.17 3.91
102 103 0.748450 CCTTTTGCATCCATCGGCAT 59.252 50.000 0.00 0.00 40.17 4.40
103 104 1.321805 CCCTTTTGCATCCATCGGCA 61.322 55.000 0.00 0.00 38.46 5.69
104 105 1.037030 TCCCTTTTGCATCCATCGGC 61.037 55.000 0.00 0.00 0.00 5.54
105 106 1.027357 CTCCCTTTTGCATCCATCGG 58.973 55.000 0.00 0.00 0.00 4.18
106 107 2.042686 TCTCCCTTTTGCATCCATCG 57.957 50.000 0.00 0.00 0.00 3.84
107 108 2.692041 CCTTCTCCCTTTTGCATCCATC 59.308 50.000 0.00 0.00 0.00 3.51
108 109 2.743553 CCTTCTCCCTTTTGCATCCAT 58.256 47.619 0.00 0.00 0.00 3.41
109 110 1.892329 GCCTTCTCCCTTTTGCATCCA 60.892 52.381 0.00 0.00 0.00 3.41
110 111 0.820226 GCCTTCTCCCTTTTGCATCC 59.180 55.000 0.00 0.00 0.00 3.51
111 112 1.844687 AGCCTTCTCCCTTTTGCATC 58.155 50.000 0.00 0.00 0.00 3.91
112 113 2.174360 GAAGCCTTCTCCCTTTTGCAT 58.826 47.619 0.00 0.00 0.00 3.96
113 114 1.620822 GAAGCCTTCTCCCTTTTGCA 58.379 50.000 0.00 0.00 0.00 4.08
114 115 0.523519 CGAAGCCTTCTCCCTTTTGC 59.476 55.000 2.49 0.00 0.00 3.68
115 116 1.168714 CCGAAGCCTTCTCCCTTTTG 58.831 55.000 2.49 0.00 0.00 2.44
116 117 0.609406 GCCGAAGCCTTCTCCCTTTT 60.609 55.000 2.49 0.00 0.00 2.27
117 118 1.002011 GCCGAAGCCTTCTCCCTTT 60.002 57.895 2.49 0.00 0.00 3.11
118 119 1.566298 ATGCCGAAGCCTTCTCCCTT 61.566 55.000 2.49 0.00 38.69 3.95
119 120 1.977293 GATGCCGAAGCCTTCTCCCT 61.977 60.000 2.49 0.00 38.69 4.20
120 121 1.524849 GATGCCGAAGCCTTCTCCC 60.525 63.158 2.49 0.00 38.69 4.30
121 122 1.524849 GGATGCCGAAGCCTTCTCC 60.525 63.158 2.49 0.00 38.69 3.71
122 123 1.524849 GGGATGCCGAAGCCTTCTC 60.525 63.158 2.49 0.00 38.69 2.87
123 124 1.852157 TTGGGATGCCGAAGCCTTCT 61.852 55.000 2.49 0.00 38.69 2.85
124 125 0.965363 TTTGGGATGCCGAAGCCTTC 60.965 55.000 0.89 0.00 38.69 3.46
125 126 0.541764 TTTTGGGATGCCGAAGCCTT 60.542 50.000 6.00 0.00 38.69 4.35
126 127 0.541764 TTTTTGGGATGCCGAAGCCT 60.542 50.000 6.00 0.00 38.69 4.58
127 128 0.108662 CTTTTTGGGATGCCGAAGCC 60.109 55.000 6.00 0.00 38.69 4.35
128 129 0.603065 ACTTTTTGGGATGCCGAAGC 59.397 50.000 6.00 0.00 40.48 3.86
129 130 4.718940 ATAACTTTTTGGGATGCCGAAG 57.281 40.909 6.00 8.83 0.00 3.79
130 131 5.654650 ACATATAACTTTTTGGGATGCCGAA 59.345 36.000 0.89 0.89 0.00 4.30
131 132 5.197451 ACATATAACTTTTTGGGATGCCGA 58.803 37.500 0.00 0.00 0.00 5.54
132 133 5.514274 ACATATAACTTTTTGGGATGCCG 57.486 39.130 0.00 0.00 0.00 5.69
133 134 9.830975 AAAATACATATAACTTTTTGGGATGCC 57.169 29.630 0.00 0.00 0.00 4.40
165 166 9.968870 GGCCCGTAGAAATATATCTTTATAGAG 57.031 37.037 0.00 0.00 32.92 2.43
166 167 9.710818 AGGCCCGTAGAAATATATCTTTATAGA 57.289 33.333 0.00 0.00 34.21 1.98
167 168 9.751542 CAGGCCCGTAGAAATATATCTTTATAG 57.248 37.037 0.00 0.00 0.00 1.31
168 169 8.202137 GCAGGCCCGTAGAAATATATCTTTATA 58.798 37.037 0.00 0.00 0.00 0.98
169 170 7.048512 GCAGGCCCGTAGAAATATATCTTTAT 58.951 38.462 0.00 0.00 0.00 1.40
170 171 6.403878 GCAGGCCCGTAGAAATATATCTTTA 58.596 40.000 0.00 0.00 0.00 1.85
171 172 5.246307 GCAGGCCCGTAGAAATATATCTTT 58.754 41.667 0.00 0.00 0.00 2.52
172 173 4.323562 GGCAGGCCCGTAGAAATATATCTT 60.324 45.833 0.00 0.00 0.00 2.40
173 174 3.197983 GGCAGGCCCGTAGAAATATATCT 59.802 47.826 0.00 0.00 0.00 1.98
174 175 3.532542 GGCAGGCCCGTAGAAATATATC 58.467 50.000 0.00 0.00 0.00 1.63
175 176 3.629142 GGCAGGCCCGTAGAAATATAT 57.371 47.619 0.00 0.00 0.00 0.86
190 191 6.374417 ACACCATATATTAAGTAGGGCAGG 57.626 41.667 2.32 0.00 0.00 4.85
194 195 8.617290 GGTCAAACACCATATATTAAGTAGGG 57.383 38.462 1.15 1.15 45.98 3.53
250 251 1.173043 TGGCACGCATAAGGAAAAGG 58.827 50.000 0.00 0.00 0.00 3.11
251 252 2.164219 ACATGGCACGCATAAGGAAAAG 59.836 45.455 0.00 0.00 0.00 2.27
255 256 1.093972 CAACATGGCACGCATAAGGA 58.906 50.000 0.00 0.00 0.00 3.36
277 278 0.318699 TGTCCAGCGTTCTCTTCGTG 60.319 55.000 0.00 0.00 0.00 4.35
291 292 2.682494 GGCCGGTAGACCTGTCCA 60.682 66.667 1.90 0.00 0.00 4.02
295 303 3.528370 CTCCGGCCGGTAGACCTG 61.528 72.222 41.57 19.97 36.47 4.00
360 368 4.250464 CAAAATTCAACATGCATCTGCCT 58.750 39.130 0.00 0.00 41.18 4.75
390 398 2.092968 GGCTGGTCATTGTCATGTAGGA 60.093 50.000 0.00 0.00 0.00 2.94
391 399 2.292267 GGCTGGTCATTGTCATGTAGG 58.708 52.381 0.00 0.00 0.00 3.18
392 400 2.989909 TGGCTGGTCATTGTCATGTAG 58.010 47.619 0.00 0.00 0.00 2.74
393 401 3.431673 TTGGCTGGTCATTGTCATGTA 57.568 42.857 0.00 0.00 0.00 2.29
394 402 2.291209 TTGGCTGGTCATTGTCATGT 57.709 45.000 0.00 0.00 0.00 3.21
395 403 3.880047 ATTTGGCTGGTCATTGTCATG 57.120 42.857 0.00 0.00 0.00 3.07
417 425 4.551410 GCAGTTGCAATCAGTTTTTCTTGC 60.551 41.667 0.59 0.00 43.25 4.01
418 426 4.025480 GGCAGTTGCAATCAGTTTTTCTTG 60.025 41.667 0.59 0.00 44.36 3.02
419 427 4.122046 GGCAGTTGCAATCAGTTTTTCTT 58.878 39.130 0.59 0.00 44.36 2.52
421 429 3.456280 TGGCAGTTGCAATCAGTTTTTC 58.544 40.909 0.59 0.00 44.36 2.29
422 430 3.540314 TGGCAGTTGCAATCAGTTTTT 57.460 38.095 0.59 0.00 44.36 1.94
423 431 3.540314 TTGGCAGTTGCAATCAGTTTT 57.460 38.095 0.59 0.00 44.36 2.43
424 432 3.656559 GATTGGCAGTTGCAATCAGTTT 58.343 40.909 0.59 0.00 44.36 2.66
446 471 1.270550 CCATTTGTCAGGTGCCTTCAC 59.729 52.381 0.00 0.00 42.40 3.18
543 571 7.510549 TCCCTCGAATTGATTCATTAATTCC 57.489 36.000 10.05 0.00 38.69 3.01
547 575 7.094549 ACGTTTTCCCTCGAATTGATTCATTAA 60.095 33.333 4.75 0.00 36.61 1.40
564 592 1.303074 GAGGGGGTCACGTTTTCCC 60.303 63.158 10.07 10.07 40.41 3.97
606 634 4.753233 AGGATGAAGAAGAAGATGTGACG 58.247 43.478 0.00 0.00 0.00 4.35
607 635 5.976458 AGAGGATGAAGAAGAAGATGTGAC 58.024 41.667 0.00 0.00 0.00 3.67
628 656 3.429141 GACCGAGCGACGTGGAGA 61.429 66.667 0.11 0.00 40.78 3.71
674 750 3.241059 CGCTACGTGTCTCGCTGC 61.241 66.667 0.00 0.00 44.19 5.25
675 751 3.241059 GCGCTACGTGTCTCGCTG 61.241 66.667 0.00 2.56 43.70 5.18
677 753 2.945066 GAGCGCTACGTGTCTCGC 60.945 66.667 11.50 14.52 46.95 5.03
709 795 2.171489 GACGACAGCGCCCTTTGTTC 62.171 60.000 2.29 0.00 42.48 3.18
946 1032 2.550180 GGTCTGAAGTCTGAACTTTGGC 59.450 50.000 0.00 0.00 45.80 4.52
960 1046 2.376855 TCTCTCTCTGGTCTGGTCTGAA 59.623 50.000 0.00 0.00 0.00 3.02
961 1047 1.988846 TCTCTCTCTGGTCTGGTCTGA 59.011 52.381 0.00 0.00 0.00 3.27
962 1048 2.026356 TCTCTCTCTCTGGTCTGGTCTG 60.026 54.545 0.00 0.00 0.00 3.51
963 1049 2.239654 CTCTCTCTCTCTGGTCTGGTCT 59.760 54.545 0.00 0.00 0.00 3.85
964 1050 2.238646 TCTCTCTCTCTCTGGTCTGGTC 59.761 54.545 0.00 0.00 0.00 4.02
965 1051 2.239654 CTCTCTCTCTCTCTGGTCTGGT 59.760 54.545 0.00 0.00 0.00 4.00
966 1052 2.505407 TCTCTCTCTCTCTCTGGTCTGG 59.495 54.545 0.00 0.00 0.00 3.86
967 1053 3.452264 TCTCTCTCTCTCTCTCTGGTCTG 59.548 52.174 0.00 0.00 0.00 3.51
968 1054 3.708631 CTCTCTCTCTCTCTCTCTGGTCT 59.291 52.174 0.00 0.00 0.00 3.85
969 1055 3.706594 TCTCTCTCTCTCTCTCTCTGGTC 59.293 52.174 0.00 0.00 0.00 4.02
970 1056 3.724478 TCTCTCTCTCTCTCTCTCTGGT 58.276 50.000 0.00 0.00 0.00 4.00
971 1057 4.760530 TTCTCTCTCTCTCTCTCTCTGG 57.239 50.000 0.00 0.00 0.00 3.86
972 1058 8.915057 ATTAATTCTCTCTCTCTCTCTCTCTG 57.085 38.462 0.00 0.00 0.00 3.35
973 1059 8.717717 TGATTAATTCTCTCTCTCTCTCTCTCT 58.282 37.037 0.00 0.00 0.00 3.10
974 1060 8.908786 TGATTAATTCTCTCTCTCTCTCTCTC 57.091 38.462 0.00 0.00 0.00 3.20
975 1061 9.872684 ATTGATTAATTCTCTCTCTCTCTCTCT 57.127 33.333 0.00 0.00 0.00 3.10
976 1062 9.903682 CATTGATTAATTCTCTCTCTCTCTCTC 57.096 37.037 0.00 0.00 0.00 3.20
977 1063 8.863086 CCATTGATTAATTCTCTCTCTCTCTCT 58.137 37.037 0.00 0.00 0.00 3.10
978 1064 8.859090 TCCATTGATTAATTCTCTCTCTCTCTC 58.141 37.037 0.00 0.00 0.00 3.20
979 1065 8.780616 TCCATTGATTAATTCTCTCTCTCTCT 57.219 34.615 0.00 0.00 0.00 3.10
980 1066 7.599998 GCTCCATTGATTAATTCTCTCTCTCTC 59.400 40.741 0.00 0.00 0.00 3.20
981 1067 7.290714 AGCTCCATTGATTAATTCTCTCTCTCT 59.709 37.037 0.00 0.00 0.00 3.10
982 1068 7.444299 AGCTCCATTGATTAATTCTCTCTCTC 58.556 38.462 0.00 0.00 0.00 3.20
1141 1256 4.530857 GATCTCCGCCACCCACCG 62.531 72.222 0.00 0.00 0.00 4.94
1329 1444 2.765807 AGGGTGCGGATCCTGGAG 60.766 66.667 8.45 0.00 27.96 3.86
1419 1534 2.821366 GTGGCGAGGCTGATGGTG 60.821 66.667 0.00 0.00 0.00 4.17
1537 1652 2.798364 GGTTAGAGAGGCCGGGAGC 61.798 68.421 2.18 0.00 42.60 4.70
1605 1723 2.894387 GGCTGATGCTCGAGGTGC 60.894 66.667 15.58 0.58 39.59 5.01
1848 1969 4.399618 GTCTAGTACATGAGAGACCTGCAA 59.600 45.833 0.00 0.00 33.64 4.08
1863 1989 4.731720 GAAACCTTCGACTGGTCTAGTAC 58.268 47.826 9.42 0.00 40.53 2.73
1901 2030 4.914983 AGCAAGAAACCTCAAGATGATGA 58.085 39.130 0.00 0.00 0.00 2.92
1902 2031 4.201792 CGAGCAAGAAACCTCAAGATGATG 60.202 45.833 0.00 0.00 0.00 3.07
1903 2032 3.937706 CGAGCAAGAAACCTCAAGATGAT 59.062 43.478 0.00 0.00 0.00 2.45
1904 2033 3.244215 ACGAGCAAGAAACCTCAAGATGA 60.244 43.478 0.00 0.00 0.00 2.92
1905 2034 3.070018 ACGAGCAAGAAACCTCAAGATG 58.930 45.455 0.00 0.00 0.00 2.90
1920 2052 2.871096 AATGGACCCTAAAACGAGCA 57.129 45.000 0.00 0.00 0.00 4.26
1926 2058 2.823154 CGGCAGAAAATGGACCCTAAAA 59.177 45.455 0.00 0.00 0.00 1.52
1947 2079 1.134220 TGTATGGAATTGGCTCCCGAC 60.134 52.381 0.00 0.00 34.22 4.79
2035 2179 2.223144 TCAACGCTTCAAAATCCACTCG 59.777 45.455 0.00 0.00 0.00 4.18
2147 2296 5.128991 AGAAGGAGGGAGTACTTTAAATCCG 59.871 44.000 0.00 0.00 32.30 4.18
2156 2305 9.762381 CTTATATTATGAGAAGGAGGGAGTACT 57.238 37.037 0.00 0.00 0.00 2.73
2157 2306 9.756571 TCTTATATTATGAGAAGGAGGGAGTAC 57.243 37.037 0.00 0.00 0.00 2.73
2159 2308 9.095700 GTTCTTATATTATGAGAAGGAGGGAGT 57.904 37.037 10.29 0.00 35.84 3.85
2160 2309 8.247562 CGTTCTTATATTATGAGAAGGAGGGAG 58.752 40.741 18.73 2.57 40.84 4.30
2161 2310 7.728981 ACGTTCTTATATTATGAGAAGGAGGGA 59.271 37.037 25.39 0.76 40.84 4.20
2162 2311 7.897864 ACGTTCTTATATTATGAGAAGGAGGG 58.102 38.462 25.39 11.48 40.84 4.30
2163 2312 9.765795 AAACGTTCTTATATTATGAGAAGGAGG 57.234 33.333 25.39 13.12 40.84 4.30
2176 2325 9.485206 ACACTAGTGTCAAAAACGTTCTTATAT 57.515 29.630 22.95 0.00 40.24 0.86
2177 2326 8.876275 ACACTAGTGTCAAAAACGTTCTTATA 57.124 30.769 22.95 0.00 40.24 0.98
2178 2327 7.781548 ACACTAGTGTCAAAAACGTTCTTAT 57.218 32.000 22.95 0.00 40.24 1.73
2179 2328 7.975616 ACTACACTAGTGTCAAAAACGTTCTTA 59.024 33.333 31.11 8.36 43.74 2.10
2180 2329 6.815142 ACTACACTAGTGTCAAAAACGTTCTT 59.185 34.615 31.11 4.99 43.74 2.52
2181 2330 6.335777 ACTACACTAGTGTCAAAAACGTTCT 58.664 36.000 31.11 5.44 43.74 3.01
2182 2331 6.579491 ACTACACTAGTGTCAAAAACGTTC 57.421 37.500 31.11 0.00 43.74 3.95
2221 2370 9.939424 ACTACTACTCCCTCTGTTCTAAAATAT 57.061 33.333 0.00 0.00 0.00 1.28
2222 2371 9.765295 AACTACTACTCCCTCTGTTCTAAAATA 57.235 33.333 0.00 0.00 0.00 1.40
2223 2372 8.667592 AACTACTACTCCCTCTGTTCTAAAAT 57.332 34.615 0.00 0.00 0.00 1.82
2224 2373 9.018582 GTAACTACTACTCCCTCTGTTCTAAAA 57.981 37.037 0.00 0.00 0.00 1.52
2225 2374 7.335422 CGTAACTACTACTCCCTCTGTTCTAAA 59.665 40.741 0.00 0.00 0.00 1.85
2226 2375 6.820656 CGTAACTACTACTCCCTCTGTTCTAA 59.179 42.308 0.00 0.00 0.00 2.10
2227 2376 6.155221 TCGTAACTACTACTCCCTCTGTTCTA 59.845 42.308 0.00 0.00 0.00 2.10
2228 2377 5.046014 TCGTAACTACTACTCCCTCTGTTCT 60.046 44.000 0.00 0.00 0.00 3.01
2229 2378 5.181748 TCGTAACTACTACTCCCTCTGTTC 58.818 45.833 0.00 0.00 0.00 3.18
2230 2379 5.171339 TCGTAACTACTACTCCCTCTGTT 57.829 43.478 0.00 0.00 0.00 3.16
2231 2380 4.833478 TCGTAACTACTACTCCCTCTGT 57.167 45.455 0.00 0.00 0.00 3.41
2232 2381 6.372103 CCATATCGTAACTACTACTCCCTCTG 59.628 46.154 0.00 0.00 0.00 3.35
2233 2382 6.044171 ACCATATCGTAACTACTACTCCCTCT 59.956 42.308 0.00 0.00 0.00 3.69
2234 2383 6.237154 ACCATATCGTAACTACTACTCCCTC 58.763 44.000 0.00 0.00 0.00 4.30
2235 2384 6.198237 ACCATATCGTAACTACTACTCCCT 57.802 41.667 0.00 0.00 0.00 4.20
2236 2385 6.890979 AACCATATCGTAACTACTACTCCC 57.109 41.667 0.00 0.00 0.00 4.30
2237 2386 9.061435 ACTTAACCATATCGTAACTACTACTCC 57.939 37.037 0.00 0.00 0.00 3.85
2406 2575 2.502510 GCTGACCGTGCGCAATTG 60.503 61.111 14.00 6.02 0.00 2.32
2426 2595 0.250124 CCTGTACTGGGCGTGACAAA 60.250 55.000 10.86 0.00 0.00 2.83
2438 2607 1.455959 CTCGCCTAGGCCCTGTACT 60.456 63.158 28.09 0.00 37.98 2.73
2443 2612 2.197324 CTCTCTCGCCTAGGCCCT 59.803 66.667 28.09 0.00 37.98 5.19
2460 2629 0.317603 ATGTATAGACGCGCGGTGTC 60.318 55.000 35.22 22.47 42.60 3.67
2461 2630 0.317603 GATGTATAGACGCGCGGTGT 60.318 55.000 35.22 20.81 0.00 4.16
2463 2632 0.382873 TTGATGTATAGACGCGCGGT 59.617 50.000 35.22 23.01 0.00 5.68
2471 2640 3.111484 TGGGCCACACTTGATGTATAGA 58.889 45.455 0.00 0.00 40.64 1.98
2482 2651 0.748005 GCGTGATTATGGGCCACACT 60.748 55.000 9.28 0.00 0.00 3.55
2483 2652 1.029408 TGCGTGATTATGGGCCACAC 61.029 55.000 9.28 11.99 0.00 3.82
2484 2653 0.322906 TTGCGTGATTATGGGCCACA 60.323 50.000 9.28 0.00 0.00 4.17
2495 2664 6.230472 TGCTTAATATATGACCTTGCGTGAT 58.770 36.000 0.00 0.00 0.00 3.06
2607 2785 2.606519 ACTAGCGGGTGGGAAGCA 60.607 61.111 0.00 0.00 0.00 3.91
2636 2814 3.808728 TGTCACACCTTTCTCCTTCAAG 58.191 45.455 0.00 0.00 0.00 3.02
2638 2816 2.485479 GCTGTCACACCTTTCTCCTTCA 60.485 50.000 0.00 0.00 0.00 3.02
2643 2821 1.346068 AGGAGCTGTCACACCTTTCTC 59.654 52.381 0.00 0.00 0.00 2.87
2644 2822 1.071385 CAGGAGCTGTCACACCTTTCT 59.929 52.381 0.00 0.00 0.00 2.52
2645 2823 1.517242 CAGGAGCTGTCACACCTTTC 58.483 55.000 0.00 0.00 0.00 2.62
2646 2824 0.109342 CCAGGAGCTGTCACACCTTT 59.891 55.000 0.00 0.00 0.00 3.11
2647 2825 1.757306 CCAGGAGCTGTCACACCTT 59.243 57.895 0.00 0.00 0.00 3.50
2648 2826 2.219875 CCCAGGAGCTGTCACACCT 61.220 63.158 0.00 0.00 0.00 4.00
2649 2827 2.348998 CCCAGGAGCTGTCACACC 59.651 66.667 0.00 0.00 0.00 4.16
2650 2828 1.302033 CACCCAGGAGCTGTCACAC 60.302 63.158 0.00 0.00 0.00 3.82
2651 2829 3.150949 CACCCAGGAGCTGTCACA 58.849 61.111 0.00 0.00 0.00 3.58
2652 2830 2.359230 GCACCCAGGAGCTGTCAC 60.359 66.667 0.00 0.00 0.00 3.67
2653 2831 2.746947 TAGGCACCCAGGAGCTGTCA 62.747 60.000 6.07 0.00 32.43 3.58
2654 2832 1.965754 CTAGGCACCCAGGAGCTGTC 61.966 65.000 6.07 0.00 32.43 3.51
2655 2833 1.992277 CTAGGCACCCAGGAGCTGT 60.992 63.158 6.07 0.00 32.43 4.40
2656 2834 2.739996 CCTAGGCACCCAGGAGCTG 61.740 68.421 6.07 0.00 33.42 4.24
2657 2835 2.366167 CCTAGGCACCCAGGAGCT 60.366 66.667 6.07 0.00 33.42 4.09
2658 2836 4.182433 GCCTAGGCACCCAGGAGC 62.182 72.222 29.33 0.00 41.49 4.70
2668 2846 2.704065 TGTTTATAGAGGGTGCCTAGGC 59.296 50.000 27.71 27.71 42.35 3.93
2669 2847 3.967987 ACTGTTTATAGAGGGTGCCTAGG 59.032 47.826 3.67 3.67 31.76 3.02
2670 2848 6.097839 TGTTACTGTTTATAGAGGGTGCCTAG 59.902 42.308 0.00 0.00 31.76 3.02
2671 2849 5.959594 TGTTACTGTTTATAGAGGGTGCCTA 59.040 40.000 0.00 0.00 31.76 3.93
2672 2850 4.781087 TGTTACTGTTTATAGAGGGTGCCT 59.219 41.667 0.00 0.00 36.03 4.75
2673 2851 5.093849 TGTTACTGTTTATAGAGGGTGCC 57.906 43.478 0.00 0.00 0.00 5.01
2674 2852 8.726870 TTTATGTTACTGTTTATAGAGGGTGC 57.273 34.615 0.00 0.00 0.00 5.01
2723 2901 9.956720 CATCTTTGAAGTTGTAAAGTTTCTGAT 57.043 29.630 0.00 0.00 40.14 2.90
2724 2902 9.173021 TCATCTTTGAAGTTGTAAAGTTTCTGA 57.827 29.630 0.00 6.11 40.14 3.27
2725 2903 9.956720 ATCATCTTTGAAGTTGTAAAGTTTCTG 57.043 29.630 0.00 4.63 40.14 3.02
2727 2905 9.950680 TGATCATCTTTGAAGTTGTAAAGTTTC 57.049 29.630 0.00 0.00 40.14 2.78
2730 2908 9.736023 GTTTGATCATCTTTGAAGTTGTAAAGT 57.264 29.630 0.00 0.00 34.96 2.66
2731 2909 9.956720 AGTTTGATCATCTTTGAAGTTGTAAAG 57.043 29.630 0.00 0.00 34.96 1.85
2734 2912 9.734620 CAAAGTTTGATCATCTTTGAAGTTGTA 57.265 29.630 29.68 0.26 45.96 2.41
2735 2913 8.253113 ACAAAGTTTGATCATCTTTGAAGTTGT 58.747 29.630 34.57 21.96 45.96 3.32
2736 2914 8.537223 CACAAAGTTTGATCATCTTTGAAGTTG 58.463 33.333 34.57 25.79 45.96 3.16
2737 2915 8.469200 TCACAAAGTTTGATCATCTTTGAAGTT 58.531 29.630 34.57 21.99 45.96 2.66
2738 2916 7.999679 TCACAAAGTTTGATCATCTTTGAAGT 58.000 30.769 34.57 22.20 45.96 3.01
2739 2917 8.133627 ACTCACAAAGTTTGATCATCTTTGAAG 58.866 33.333 34.57 31.06 45.96 3.02
2740 2918 7.999679 ACTCACAAAGTTTGATCATCTTTGAA 58.000 30.769 34.57 26.39 45.96 2.69
2741 2919 7.572523 ACTCACAAAGTTTGATCATCTTTGA 57.427 32.000 34.57 23.54 45.96 2.69
2755 2933 5.391312 AAACTTGCAAGAACTCACAAAGT 57.609 34.783 32.50 3.19 41.10 2.66
2756 2934 5.863397 TGAAAACTTGCAAGAACTCACAAAG 59.137 36.000 32.50 2.47 0.00 2.77
2757 2935 5.777802 TGAAAACTTGCAAGAACTCACAAA 58.222 33.333 32.50 6.74 0.00 2.83
2758 2936 5.384063 TGAAAACTTGCAAGAACTCACAA 57.616 34.783 32.50 7.47 0.00 3.33
2759 2937 5.105797 ACATGAAAACTTGCAAGAACTCACA 60.106 36.000 32.50 21.22 0.00 3.58
2760 2938 5.343249 ACATGAAAACTTGCAAGAACTCAC 58.657 37.500 32.50 16.97 0.00 3.51
2761 2939 5.125257 TGACATGAAAACTTGCAAGAACTCA 59.875 36.000 32.50 26.21 0.00 3.41
2762 2940 5.581605 TGACATGAAAACTTGCAAGAACTC 58.418 37.500 32.50 22.14 0.00 3.01
2763 2941 5.581126 TGACATGAAAACTTGCAAGAACT 57.419 34.783 32.50 15.18 0.00 3.01
2764 2942 6.645700 TTTGACATGAAAACTTGCAAGAAC 57.354 33.333 32.50 18.53 0.00 3.01
2765 2943 7.846644 ATTTTGACATGAAAACTTGCAAGAA 57.153 28.000 32.50 11.72 0.00 2.52
2766 2944 9.195411 GATATTTTGACATGAAAACTTGCAAGA 57.805 29.630 32.50 10.47 0.00 3.02
2767 2945 8.980610 TGATATTTTGACATGAAAACTTGCAAG 58.019 29.630 24.84 24.84 0.00 4.01
2768 2946 8.883954 TGATATTTTGACATGAAAACTTGCAA 57.116 26.923 0.00 0.00 0.00 4.08
2769 2947 8.927721 CATGATATTTTGACATGAAAACTTGCA 58.072 29.630 0.00 0.00 42.41 4.08
2770 2948 8.928733 ACATGATATTTTGACATGAAAACTTGC 58.071 29.630 12.24 0.00 42.41 4.01
2780 2958 9.911788 ACCTTTCTCTACATGATATTTTGACAT 57.088 29.630 0.00 0.00 0.00 3.06
2781 2959 9.166173 CACCTTTCTCTACATGATATTTTGACA 57.834 33.333 0.00 0.00 0.00 3.58
2782 2960 9.167311 ACACCTTTCTCTACATGATATTTTGAC 57.833 33.333 0.00 0.00 0.00 3.18
2785 2963 9.314321 CGTACACCTTTCTCTACATGATATTTT 57.686 33.333 0.00 0.00 0.00 1.82
2786 2964 8.692710 TCGTACACCTTTCTCTACATGATATTT 58.307 33.333 0.00 0.00 0.00 1.40
2787 2965 8.234136 TCGTACACCTTTCTCTACATGATATT 57.766 34.615 0.00 0.00 0.00 1.28
2788 2966 7.818997 TCGTACACCTTTCTCTACATGATAT 57.181 36.000 0.00 0.00 0.00 1.63
2789 2967 7.634671 TTCGTACACCTTTCTCTACATGATA 57.365 36.000 0.00 0.00 0.00 2.15
2790 2968 6.525578 TTCGTACACCTTTCTCTACATGAT 57.474 37.500 0.00 0.00 0.00 2.45
2791 2969 5.970317 TTCGTACACCTTTCTCTACATGA 57.030 39.130 0.00 0.00 0.00 3.07
2792 2970 7.974501 ACTAATTCGTACACCTTTCTCTACATG 59.025 37.037 0.00 0.00 0.00 3.21
2793 2971 8.064336 ACTAATTCGTACACCTTTCTCTACAT 57.936 34.615 0.00 0.00 0.00 2.29
2794 2972 7.458409 ACTAATTCGTACACCTTTCTCTACA 57.542 36.000 0.00 0.00 0.00 2.74
2795 2973 8.754230 AAACTAATTCGTACACCTTTCTCTAC 57.246 34.615 0.00 0.00 0.00 2.59
2797 2975 9.768662 TTAAAACTAATTCGTACACCTTTCTCT 57.231 29.630 0.00 0.00 0.00 3.10
2819 2997 9.539825 TGAGCATTTTTAGCACTGAAATTTAAA 57.460 25.926 0.00 0.00 0.00 1.52
2820 2998 9.539825 TTGAGCATTTTTAGCACTGAAATTTAA 57.460 25.926 0.00 0.00 0.00 1.52
2821 2999 9.539825 TTTGAGCATTTTTAGCACTGAAATTTA 57.460 25.926 0.00 0.00 0.00 1.40
2822 3000 8.436046 TTTGAGCATTTTTAGCACTGAAATTT 57.564 26.923 0.00 0.00 0.00 1.82
2823 3001 8.337532 GTTTTGAGCATTTTTAGCACTGAAATT 58.662 29.630 0.00 0.00 0.00 1.82
2824 3002 7.712205 AGTTTTGAGCATTTTTAGCACTGAAAT 59.288 29.630 0.00 0.00 0.00 2.17
2825 3003 7.041107 AGTTTTGAGCATTTTTAGCACTGAAA 58.959 30.769 0.00 0.00 0.00 2.69
2826 3004 6.572519 AGTTTTGAGCATTTTTAGCACTGAA 58.427 32.000 0.00 0.00 0.00 3.02
2827 3005 6.147864 AGTTTTGAGCATTTTTAGCACTGA 57.852 33.333 0.00 0.00 0.00 3.41
2828 3006 6.476380 TGAAGTTTTGAGCATTTTTAGCACTG 59.524 34.615 0.00 0.00 0.00 3.66
2829 3007 6.572519 TGAAGTTTTGAGCATTTTTAGCACT 58.427 32.000 0.00 0.00 0.00 4.40
2830 3008 6.826893 TGAAGTTTTGAGCATTTTTAGCAC 57.173 33.333 0.00 0.00 0.00 4.40
2831 3009 6.018832 GCTTGAAGTTTTGAGCATTTTTAGCA 60.019 34.615 0.00 0.00 35.29 3.49
2832 3010 6.018832 TGCTTGAAGTTTTGAGCATTTTTAGC 60.019 34.615 0.00 0.00 39.97 3.09
2833 3011 7.467557 TGCTTGAAGTTTTGAGCATTTTTAG 57.532 32.000 0.00 0.00 39.97 1.85
2834 3012 7.840342 TTGCTTGAAGTTTTGAGCATTTTTA 57.160 28.000 8.85 0.00 43.83 1.52
2835 3013 6.740411 TTGCTTGAAGTTTTGAGCATTTTT 57.260 29.167 8.85 0.00 43.83 1.94
2836 3014 6.539464 TCATTGCTTGAAGTTTTGAGCATTTT 59.461 30.769 8.85 0.00 43.83 1.82
2837 3015 6.050432 TCATTGCTTGAAGTTTTGAGCATTT 58.950 32.000 8.85 0.44 43.83 2.32
2838 3016 5.603596 TCATTGCTTGAAGTTTTGAGCATT 58.396 33.333 8.85 4.47 43.83 3.56
2839 3017 5.204409 TCATTGCTTGAAGTTTTGAGCAT 57.796 34.783 8.85 0.25 43.83 3.79
2840 3018 4.652421 TCATTGCTTGAAGTTTTGAGCA 57.348 36.364 0.00 5.09 42.84 4.26
2841 3019 5.971895 TTTCATTGCTTGAAGTTTTGAGC 57.028 34.783 0.00 0.00 44.90 4.26
2842 3020 7.529880 AGTTTTCATTGCTTGAAGTTTTGAG 57.470 32.000 0.00 0.00 44.90 3.02
2843 3021 7.903995 AAGTTTTCATTGCTTGAAGTTTTGA 57.096 28.000 0.00 0.00 44.90 2.69
2844 3022 8.953507 AAAAGTTTTCATTGCTTGAAGTTTTG 57.046 26.923 0.00 0.00 44.90 2.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.