Multiple sequence alignment - TraesCS6B01G427800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G427800 chr6B 100.000 2696 0 0 1 2696 696113958 696111263 0.000000e+00 4979.0
1 TraesCS6B01G427800 chr6B 97.101 828 5 2 1883 2696 684030366 684029544 0.000000e+00 1378.0
2 TraesCS6B01G427800 chr6B 75.938 960 148 49 588 1507 696075682 696076598 1.490000e-112 416.0
3 TraesCS6B01G427800 chr6D 91.860 1425 73 14 498 1882 457639402 457637981 0.000000e+00 1949.0
4 TraesCS6B01G427800 chr6D 80.623 289 54 1 211 497 456296340 456296628 3.490000e-54 222.0
5 TraesCS6B01G427800 chr6D 77.551 343 74 2 157 496 59782852 59783194 1.270000e-48 204.0
6 TraesCS6B01G427800 chr6D 77.391 345 70 7 158 496 8344079 8343737 5.890000e-47 198.0
7 TraesCS6B01G427800 chr6D 77.101 345 73 5 157 496 143958785 143958442 7.620000e-46 195.0
8 TraesCS6B01G427800 chr6A 90.008 1291 107 10 609 1882 604579468 604578183 0.000000e+00 1650.0
9 TraesCS6B01G427800 chr6A 80.999 721 107 15 996 1699 604573680 604572973 1.830000e-151 545.0
10 TraesCS6B01G427800 chr6A 82.334 634 88 13 1231 1857 604525157 604525773 1.840000e-146 529.0
11 TraesCS6B01G427800 chr6A 96.491 285 5 2 1880 2163 44819404 44819684 1.460000e-127 466.0
12 TraesCS6B01G427800 chr3B 98.896 815 6 1 1882 2696 772159654 772158843 0.000000e+00 1452.0
13 TraesCS6B01G427800 chr3B 80.236 339 62 4 162 496 818342470 818342807 1.600000e-62 250.0
14 TraesCS6B01G427800 chr3B 79.130 345 66 5 157 496 820889825 820890168 1.610000e-57 233.0
15 TraesCS6B01G427800 chr3B 79.070 344 67 4 157 496 825271432 825271090 5.800000e-57 231.0
16 TraesCS6B01G427800 chr4B 98.528 815 6 3 1883 2696 476642913 476643722 0.000000e+00 1434.0
17 TraesCS6B01G427800 chr4B 96.981 828 8 7 1883 2696 620074006 620073182 0.000000e+00 1375.0
18 TraesCS6B01G427800 chr4B 96.973 826 11 6 1881 2696 626958046 626957225 0.000000e+00 1375.0
19 TraesCS6B01G427800 chr4B 79.360 344 65 5 157 496 617393063 617392722 1.250000e-58 237.0
20 TraesCS6B01G427800 chr4B 78.324 346 68 6 157 497 330749169 330748826 1.630000e-52 217.0
21 TraesCS6B01G427800 chr4B 77.937 349 73 3 157 502 546575937 546575590 5.850000e-52 215.0
22 TraesCS6B01G427800 chr4B 77.907 344 71 4 157 496 16082157 16082499 2.720000e-50 209.0
23 TraesCS6B01G427800 chr2B 98.280 814 6 2 1883 2696 758310112 758309307 0.000000e+00 1419.0
24 TraesCS6B01G427800 chr2B 81.849 595 94 8 1113 1702 34864331 34863746 3.120000e-134 488.0
25 TraesCS6B01G427800 chr2B 80.271 664 115 9 1166 1826 34954092 34953442 1.120000e-133 486.0
26 TraesCS6B01G427800 chr2A 97.464 828 6 2 1883 2696 772768382 772769208 0.000000e+00 1399.0
27 TraesCS6B01G427800 chr2A 97.101 828 8 7 1882 2696 178585043 178585867 0.000000e+00 1382.0
28 TraesCS6B01G427800 chr2A 79.640 722 121 12 996 1702 23828443 23829153 1.860000e-136 496.0
29 TraesCS6B01G427800 chr2A 79.668 723 120 13 996 1702 23878847 23879558 1.860000e-136 496.0
30 TraesCS6B01G427800 chr7B 96.984 829 9 3 1882 2696 680434748 680433922 0.000000e+00 1378.0
31 TraesCS6B01G427800 chr5A 96.981 828 5 3 1883 2696 480400043 480399222 0.000000e+00 1373.0
32 TraesCS6B01G427800 chr5A 96.981 828 5 2 1883 2696 524308643 524307822 0.000000e+00 1373.0
33 TraesCS6B01G427800 chr1B 96.751 831 8 3 1883 2696 17477907 17478735 0.000000e+00 1367.0
34 TraesCS6B01G427800 chr1B 79.104 335 61 5 157 485 46831942 46832273 3.490000e-54 222.0
35 TraesCS6B01G427800 chr1B 78.426 343 69 4 157 495 330838149 330837808 4.520000e-53 219.0
36 TraesCS6B01G427800 chr7A 96.845 824 11 7 1883 2696 293418273 293419091 0.000000e+00 1363.0
37 TraesCS6B01G427800 chr2D 79.391 723 123 12 996 1702 21642502 21643214 1.120000e-133 486.0
38 TraesCS6B01G427800 chr2D 81.616 359 57 6 146 496 357287602 357287959 3.400000e-74 289.0
39 TraesCS6B01G427800 chr7D 79.964 559 100 5 1112 1670 590647934 590648480 4.180000e-108 401.0
40 TraesCS6B01G427800 chr3D 80.000 360 68 3 140 496 481928935 481929293 2.060000e-66 263.0
41 TraesCS6B01G427800 chr3D 80.464 302 50 5 201 496 90831971 90831673 3.490000e-54 222.0
42 TraesCS6B01G427800 chr3D 78.528 326 65 3 159 479 44201049 44200724 2.720000e-50 209.0
43 TraesCS6B01G427800 chr3D 77.557 352 67 8 157 500 395834397 395834050 4.550000e-48 202.0
44 TraesCS6B01G427800 chr1D 80.119 337 60 5 155 485 205511322 205510987 7.460000e-61 244.0
45 TraesCS6B01G427800 chr1D 77.904 353 71 6 148 496 420239857 420239508 2.100000e-51 213.0
46 TraesCS6B01G427800 chr1D 77.901 362 62 12 140 496 106292759 106293107 2.720000e-50 209.0
47 TraesCS6B01G427800 chr1D 77.812 329 69 3 172 496 435361438 435361766 1.640000e-47 200.0
48 TraesCS6B01G427800 chr5B 79.070 344 67 4 157 496 276897770 276897428 5.800000e-57 231.0
49 TraesCS6B01G427800 chr5B 78.779 344 68 4 157 496 445179271 445179613 2.700000e-55 226.0
50 TraesCS6B01G427800 chr1A 79.290 338 58 10 155 485 262818721 262819053 2.700000e-55 226.0
51 TraesCS6B01G427800 chr4A 78.797 349 63 8 157 498 24156503 24156847 9.710000e-55 224.0
52 TraesCS6B01G427800 chr4A 78.488 344 69 4 157 496 699175048 699175390 1.260000e-53 220.0
53 TraesCS6B01G427800 chr4A 78.488 344 65 8 157 494 655516628 655516968 1.630000e-52 217.0
54 TraesCS6B01G427800 chr4D 78.545 275 51 5 202 471 76612595 76612324 9.920000e-40 174.0
55 TraesCS6B01G427800 chr4D 75.510 343 79 4 157 495 504509089 504509430 2.150000e-36 163.0
56 TraesCS6B01G427800 chr4D 76.527 311 62 6 154 455 459569354 459569662 2.780000e-35 159.0
57 TraesCS6B01G427800 chr4D 77.528 267 52 5 201 462 490864570 490864307 1.290000e-33 154.0
58 TraesCS6B01G427800 chr4D 85.075 134 20 0 363 496 318609323 318609456 1.300000e-28 137.0
59 TraesCS6B01G427800 chr4D 75.862 232 47 8 271 496 418735833 418736061 2.840000e-20 110.0
60 TraesCS6B01G427800 chr4D 85.227 88 12 1 410 496 1344358 1344271 3.700000e-14 89.8
61 TraesCS6B01G427800 chrUn 82.432 74 13 0 395 468 18793508 18793435 6.230000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G427800 chr6B 696111263 696113958 2695 True 4979 4979 100.000 1 2696 1 chr6B.!!$R2 2695
1 TraesCS6B01G427800 chr6B 684029544 684030366 822 True 1378 1378 97.101 1883 2696 1 chr6B.!!$R1 813
2 TraesCS6B01G427800 chr6B 696075682 696076598 916 False 416 416 75.938 588 1507 1 chr6B.!!$F1 919
3 TraesCS6B01G427800 chr6D 457637981 457639402 1421 True 1949 1949 91.860 498 1882 1 chr6D.!!$R3 1384
4 TraesCS6B01G427800 chr6A 604578183 604579468 1285 True 1650 1650 90.008 609 1882 1 chr6A.!!$R2 1273
5 TraesCS6B01G427800 chr6A 604572973 604573680 707 True 545 545 80.999 996 1699 1 chr6A.!!$R1 703
6 TraesCS6B01G427800 chr6A 604525157 604525773 616 False 529 529 82.334 1231 1857 1 chr6A.!!$F2 626
7 TraesCS6B01G427800 chr3B 772158843 772159654 811 True 1452 1452 98.896 1882 2696 1 chr3B.!!$R1 814
8 TraesCS6B01G427800 chr4B 476642913 476643722 809 False 1434 1434 98.528 1883 2696 1 chr4B.!!$F2 813
9 TraesCS6B01G427800 chr4B 620073182 620074006 824 True 1375 1375 96.981 1883 2696 1 chr4B.!!$R4 813
10 TraesCS6B01G427800 chr4B 626957225 626958046 821 True 1375 1375 96.973 1881 2696 1 chr4B.!!$R5 815
11 TraesCS6B01G427800 chr2B 758309307 758310112 805 True 1419 1419 98.280 1883 2696 1 chr2B.!!$R3 813
12 TraesCS6B01G427800 chr2B 34863746 34864331 585 True 488 488 81.849 1113 1702 1 chr2B.!!$R1 589
13 TraesCS6B01G427800 chr2B 34953442 34954092 650 True 486 486 80.271 1166 1826 1 chr2B.!!$R2 660
14 TraesCS6B01G427800 chr2A 772768382 772769208 826 False 1399 1399 97.464 1883 2696 1 chr2A.!!$F4 813
15 TraesCS6B01G427800 chr2A 178585043 178585867 824 False 1382 1382 97.101 1882 2696 1 chr2A.!!$F3 814
16 TraesCS6B01G427800 chr2A 23828443 23829153 710 False 496 496 79.640 996 1702 1 chr2A.!!$F1 706
17 TraesCS6B01G427800 chr2A 23878847 23879558 711 False 496 496 79.668 996 1702 1 chr2A.!!$F2 706
18 TraesCS6B01G427800 chr7B 680433922 680434748 826 True 1378 1378 96.984 1882 2696 1 chr7B.!!$R1 814
19 TraesCS6B01G427800 chr5A 480399222 480400043 821 True 1373 1373 96.981 1883 2696 1 chr5A.!!$R1 813
20 TraesCS6B01G427800 chr5A 524307822 524308643 821 True 1373 1373 96.981 1883 2696 1 chr5A.!!$R2 813
21 TraesCS6B01G427800 chr1B 17477907 17478735 828 False 1367 1367 96.751 1883 2696 1 chr1B.!!$F1 813
22 TraesCS6B01G427800 chr7A 293418273 293419091 818 False 1363 1363 96.845 1883 2696 1 chr7A.!!$F1 813
23 TraesCS6B01G427800 chr2D 21642502 21643214 712 False 486 486 79.391 996 1702 1 chr2D.!!$F1 706
24 TraesCS6B01G427800 chr7D 590647934 590648480 546 False 401 401 79.964 1112 1670 1 chr7D.!!$F1 558

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
333 334 0.031994 AACACATTTTGCTCGGCACC 59.968 50.0 0.0 0.0 38.71 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1868 1967 1.141657 ACCAGTGAATCAGCACACACT 59.858 47.619 0.0 0.0 43.05 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.816640 AGCTTTATGATATTTTTCGTGTGTGT 58.183 30.769 0.00 0.00 0.00 3.72
26 27 8.296713 AGCTTTATGATATTTTTCGTGTGTGTT 58.703 29.630 0.00 0.00 0.00 3.32
27 28 8.911662 GCTTTATGATATTTTTCGTGTGTGTTT 58.088 29.630 0.00 0.00 0.00 2.83
29 30 9.952188 TTTATGATATTTTTCGTGTGTGTTTCA 57.048 25.926 0.00 0.00 0.00 2.69
30 31 9.952188 TTATGATATTTTTCGTGTGTGTTTCAA 57.048 25.926 0.00 0.00 0.00 2.69
31 32 8.864069 ATGATATTTTTCGTGTGTGTTTCAAA 57.136 26.923 0.00 0.00 0.00 2.69
32 33 8.334016 TGATATTTTTCGTGTGTGTTTCAAAG 57.666 30.769 0.00 0.00 0.00 2.77
33 34 7.971168 TGATATTTTTCGTGTGTGTTTCAAAGT 59.029 29.630 0.00 0.00 0.00 2.66
34 35 5.814314 TTTTTCGTGTGTGTTTCAAAGTG 57.186 34.783 0.00 0.00 0.00 3.16
35 36 2.535934 TCGTGTGTGTTTCAAAGTGC 57.464 45.000 0.00 0.00 0.00 4.40
36 37 1.807142 TCGTGTGTGTTTCAAAGTGCA 59.193 42.857 0.00 0.00 0.00 4.57
37 38 2.421775 TCGTGTGTGTTTCAAAGTGCAT 59.578 40.909 0.00 0.00 0.00 3.96
38 39 3.623510 TCGTGTGTGTTTCAAAGTGCATA 59.376 39.130 0.00 0.00 0.00 3.14
39 40 4.095036 TCGTGTGTGTTTCAAAGTGCATAA 59.905 37.500 0.00 0.00 0.00 1.90
40 41 4.975502 CGTGTGTGTTTCAAAGTGCATAAT 59.024 37.500 0.00 0.00 0.00 1.28
41 42 6.017852 TCGTGTGTGTTTCAAAGTGCATAATA 60.018 34.615 0.00 0.00 0.00 0.98
42 43 6.634837 CGTGTGTGTTTCAAAGTGCATAATAA 59.365 34.615 0.00 0.00 0.00 1.40
43 44 7.325821 CGTGTGTGTTTCAAAGTGCATAATAAT 59.674 33.333 0.00 0.00 0.00 1.28
44 45 8.427012 GTGTGTGTTTCAAAGTGCATAATAATG 58.573 33.333 0.00 0.00 36.09 1.90
67 68 8.841444 ATGCTTTGTCGTATATGAACAAAATC 57.159 30.769 16.51 13.34 31.19 2.17
68 69 7.247728 TGCTTTGTCGTATATGAACAAAATCC 58.752 34.615 16.51 11.54 31.19 3.01
69 70 6.410914 GCTTTGTCGTATATGAACAAAATCCG 59.589 38.462 16.51 10.33 31.19 4.18
70 71 7.598189 TTTGTCGTATATGAACAAAATCCGA 57.402 32.000 14.80 0.00 0.00 4.55
71 72 7.598189 TTGTCGTATATGAACAAAATCCGAA 57.402 32.000 0.00 0.00 0.00 4.30
72 73 7.598189 TGTCGTATATGAACAAAATCCGAAA 57.402 32.000 0.00 0.00 0.00 3.46
73 74 8.203937 TGTCGTATATGAACAAAATCCGAAAT 57.796 30.769 0.00 0.00 0.00 2.17
74 75 8.332464 TGTCGTATATGAACAAAATCCGAAATC 58.668 33.333 0.00 0.00 0.00 2.17
75 76 8.332464 GTCGTATATGAACAAAATCCGAAATCA 58.668 33.333 0.00 0.00 0.00 2.57
76 77 8.332464 TCGTATATGAACAAAATCCGAAATCAC 58.668 33.333 0.00 0.00 0.00 3.06
77 78 7.317970 CGTATATGAACAAAATCCGAAATCACG 59.682 37.037 0.00 0.00 0.00 4.35
78 79 5.621197 ATGAACAAAATCCGAAATCACGA 57.379 34.783 0.00 0.00 35.09 4.35
79 80 5.425577 TGAACAAAATCCGAAATCACGAA 57.574 34.783 0.00 0.00 35.09 3.85
80 81 6.007936 TGAACAAAATCCGAAATCACGAAT 57.992 33.333 0.00 0.00 35.09 3.34
81 82 6.083630 TGAACAAAATCCGAAATCACGAATC 58.916 36.000 0.00 0.00 35.09 2.52
82 83 5.880054 ACAAAATCCGAAATCACGAATCT 57.120 34.783 0.00 0.00 35.09 2.40
83 84 5.869350 ACAAAATCCGAAATCACGAATCTC 58.131 37.500 0.00 0.00 35.09 2.75
84 85 5.163754 ACAAAATCCGAAATCACGAATCTCC 60.164 40.000 0.00 0.00 35.09 3.71
85 86 3.819564 ATCCGAAATCACGAATCTCCA 57.180 42.857 0.00 0.00 35.09 3.86
86 87 3.603158 TCCGAAATCACGAATCTCCAA 57.397 42.857 0.00 0.00 35.09 3.53
87 88 3.259064 TCCGAAATCACGAATCTCCAAC 58.741 45.455 0.00 0.00 35.09 3.77
88 89 3.000041 CCGAAATCACGAATCTCCAACA 59.000 45.455 0.00 0.00 35.09 3.33
89 90 3.181520 CCGAAATCACGAATCTCCAACAC 60.182 47.826 0.00 0.00 35.09 3.32
90 91 3.431912 CGAAATCACGAATCTCCAACACA 59.568 43.478 0.00 0.00 35.09 3.72
91 92 4.093408 CGAAATCACGAATCTCCAACACAT 59.907 41.667 0.00 0.00 35.09 3.21
92 93 5.390885 CGAAATCACGAATCTCCAACACATT 60.391 40.000 0.00 0.00 35.09 2.71
93 94 5.551760 AATCACGAATCTCCAACACATTC 57.448 39.130 0.00 0.00 0.00 2.67
94 95 4.001618 TCACGAATCTCCAACACATTCA 57.998 40.909 0.00 0.00 0.00 2.57
95 96 4.384940 TCACGAATCTCCAACACATTCAA 58.615 39.130 0.00 0.00 0.00 2.69
96 97 4.213270 TCACGAATCTCCAACACATTCAAC 59.787 41.667 0.00 0.00 0.00 3.18
97 98 4.024133 CACGAATCTCCAACACATTCAACA 60.024 41.667 0.00 0.00 0.00 3.33
98 99 4.024048 ACGAATCTCCAACACATTCAACAC 60.024 41.667 0.00 0.00 0.00 3.32
99 100 4.214119 CGAATCTCCAACACATTCAACACT 59.786 41.667 0.00 0.00 0.00 3.55
100 101 5.277974 CGAATCTCCAACACATTCAACACTT 60.278 40.000 0.00 0.00 0.00 3.16
101 102 4.898829 TCTCCAACACATTCAACACTTG 57.101 40.909 0.00 0.00 0.00 3.16
102 103 3.631686 TCTCCAACACATTCAACACTTGG 59.368 43.478 0.00 0.00 0.00 3.61
103 104 3.360867 TCCAACACATTCAACACTTGGT 58.639 40.909 0.00 0.00 31.77 3.67
104 105 3.380004 TCCAACACATTCAACACTTGGTC 59.620 43.478 0.00 0.00 31.77 4.02
105 106 3.130164 CCAACACATTCAACACTTGGTCA 59.870 43.478 0.00 0.00 0.00 4.02
106 107 4.381398 CCAACACATTCAACACTTGGTCAA 60.381 41.667 0.00 0.00 0.00 3.18
107 108 5.350633 CAACACATTCAACACTTGGTCAAT 58.649 37.500 0.00 0.00 0.00 2.57
108 109 4.935702 ACACATTCAACACTTGGTCAATG 58.064 39.130 0.00 0.00 29.10 2.82
109 110 3.737266 CACATTCAACACTTGGTCAATGC 59.263 43.478 0.00 0.00 25.09 3.56
110 111 3.384146 ACATTCAACACTTGGTCAATGCA 59.616 39.130 0.00 0.00 25.09 3.96
111 112 3.435105 TTCAACACTTGGTCAATGCAC 57.565 42.857 0.00 0.00 0.00 4.57
112 113 2.373224 TCAACACTTGGTCAATGCACA 58.627 42.857 0.00 0.00 0.00 4.57
113 114 2.098934 TCAACACTTGGTCAATGCACAC 59.901 45.455 0.00 0.00 0.00 3.82
114 115 2.057137 ACACTTGGTCAATGCACACT 57.943 45.000 0.00 0.00 0.00 3.55
115 116 2.378038 ACACTTGGTCAATGCACACTT 58.622 42.857 0.00 0.00 0.00 3.16
116 117 2.760092 ACACTTGGTCAATGCACACTTT 59.240 40.909 0.00 0.00 0.00 2.66
117 118 3.951037 ACACTTGGTCAATGCACACTTTA 59.049 39.130 0.00 0.00 0.00 1.85
118 119 4.584325 ACACTTGGTCAATGCACACTTTAT 59.416 37.500 0.00 0.00 0.00 1.40
119 120 5.767665 ACACTTGGTCAATGCACACTTTATA 59.232 36.000 0.00 0.00 0.00 0.98
120 121 6.072508 ACACTTGGTCAATGCACACTTTATAG 60.073 38.462 0.00 0.00 0.00 1.31
121 122 6.003950 ACTTGGTCAATGCACACTTTATAGT 58.996 36.000 0.00 0.00 34.00 2.12
122 123 6.149474 ACTTGGTCAATGCACACTTTATAGTC 59.851 38.462 0.00 0.00 30.26 2.59
123 124 4.941263 TGGTCAATGCACACTTTATAGTCC 59.059 41.667 0.00 0.00 30.26 3.85
124 125 5.186198 GGTCAATGCACACTTTATAGTCCT 58.814 41.667 0.00 0.00 30.26 3.85
125 126 5.294552 GGTCAATGCACACTTTATAGTCCTC 59.705 44.000 0.00 0.00 30.26 3.71
126 127 5.005779 GTCAATGCACACTTTATAGTCCTCG 59.994 44.000 0.00 0.00 30.26 4.63
127 128 2.888594 TGCACACTTTATAGTCCTCGC 58.111 47.619 0.00 0.00 30.26 5.03
128 129 2.496070 TGCACACTTTATAGTCCTCGCT 59.504 45.455 0.00 0.00 30.26 4.93
129 130 2.860735 GCACACTTTATAGTCCTCGCTG 59.139 50.000 0.00 0.00 30.26 5.18
130 131 3.676324 GCACACTTTATAGTCCTCGCTGT 60.676 47.826 0.00 0.00 30.26 4.40
131 132 4.439700 GCACACTTTATAGTCCTCGCTGTA 60.440 45.833 0.00 0.00 30.26 2.74
132 133 5.736492 GCACACTTTATAGTCCTCGCTGTAT 60.736 44.000 0.00 0.00 30.26 2.29
133 134 6.514541 GCACACTTTATAGTCCTCGCTGTATA 60.515 42.308 0.00 0.00 30.26 1.47
134 135 7.594714 CACACTTTATAGTCCTCGCTGTATAT 58.405 38.462 0.00 0.00 30.26 0.86
135 136 8.082852 CACACTTTATAGTCCTCGCTGTATATT 58.917 37.037 0.00 0.00 30.26 1.28
136 137 9.293404 ACACTTTATAGTCCTCGCTGTATATTA 57.707 33.333 0.00 0.00 30.26 0.98
144 145 8.539770 AGTCCTCGCTGTATATTAATGATTTG 57.460 34.615 0.00 0.00 0.00 2.32
145 146 7.604164 AGTCCTCGCTGTATATTAATGATTTGG 59.396 37.037 0.00 0.00 0.00 3.28
146 147 7.387948 GTCCTCGCTGTATATTAATGATTTGGT 59.612 37.037 0.00 0.00 0.00 3.67
147 148 7.602644 TCCTCGCTGTATATTAATGATTTGGTC 59.397 37.037 0.00 0.00 0.00 4.02
148 149 7.387673 CCTCGCTGTATATTAATGATTTGGTCA 59.612 37.037 0.00 0.00 42.06 4.02
149 150 8.310406 TCGCTGTATATTAATGATTTGGTCAG 57.690 34.615 0.00 0.00 40.92 3.51
150 151 7.931407 TCGCTGTATATTAATGATTTGGTCAGT 59.069 33.333 0.00 0.00 40.92 3.41
151 152 9.203421 CGCTGTATATTAATGATTTGGTCAGTA 57.797 33.333 0.00 0.00 40.92 2.74
159 160 8.918202 TTAATGATTTGGTCAGTAGTTGTCTT 57.082 30.769 0.00 0.00 40.92 3.01
160 161 7.823745 AATGATTTGGTCAGTAGTTGTCTTT 57.176 32.000 0.00 0.00 40.92 2.52
161 162 6.618287 TGATTTGGTCAGTAGTTGTCTTTG 57.382 37.500 0.00 0.00 31.80 2.77
162 163 5.530915 TGATTTGGTCAGTAGTTGTCTTTGG 59.469 40.000 0.00 0.00 31.80 3.28
163 164 4.497291 TTGGTCAGTAGTTGTCTTTGGT 57.503 40.909 0.00 0.00 0.00 3.67
164 165 3.804036 TGGTCAGTAGTTGTCTTTGGTG 58.196 45.455 0.00 0.00 0.00 4.17
165 166 3.139077 GGTCAGTAGTTGTCTTTGGTGG 58.861 50.000 0.00 0.00 0.00 4.61
166 167 3.181458 GGTCAGTAGTTGTCTTTGGTGGA 60.181 47.826 0.00 0.00 0.00 4.02
167 168 4.505039 GGTCAGTAGTTGTCTTTGGTGGAT 60.505 45.833 0.00 0.00 0.00 3.41
168 169 4.691216 GTCAGTAGTTGTCTTTGGTGGATC 59.309 45.833 0.00 0.00 0.00 3.36
169 170 4.003648 CAGTAGTTGTCTTTGGTGGATCC 58.996 47.826 4.20 4.20 0.00 3.36
170 171 3.650942 AGTAGTTGTCTTTGGTGGATCCA 59.349 43.478 11.44 11.44 45.60 3.41
188 189 3.552875 TCCACTCGGATCTAATCTTCGT 58.447 45.455 0.00 0.00 35.91 3.85
189 190 3.952323 TCCACTCGGATCTAATCTTCGTT 59.048 43.478 0.00 0.00 35.91 3.85
190 191 4.036498 TCCACTCGGATCTAATCTTCGTTC 59.964 45.833 0.00 0.00 35.91 3.95
191 192 3.969352 CACTCGGATCTAATCTTCGTTCG 59.031 47.826 0.00 0.00 0.00 3.95
192 193 3.626670 ACTCGGATCTAATCTTCGTTCGT 59.373 43.478 0.00 0.00 0.00 3.85
193 194 4.206698 TCGGATCTAATCTTCGTTCGTC 57.793 45.455 0.00 0.00 0.00 4.20
194 195 3.875727 TCGGATCTAATCTTCGTTCGTCT 59.124 43.478 0.00 0.00 0.00 4.18
195 196 5.052481 TCGGATCTAATCTTCGTTCGTCTA 58.948 41.667 0.00 0.00 0.00 2.59
196 197 5.525012 TCGGATCTAATCTTCGTTCGTCTAA 59.475 40.000 0.00 0.00 0.00 2.10
197 198 6.037500 TCGGATCTAATCTTCGTTCGTCTAAA 59.962 38.462 0.00 0.00 0.00 1.85
198 199 6.856938 CGGATCTAATCTTCGTTCGTCTAAAT 59.143 38.462 0.00 0.00 0.00 1.40
199 200 7.378995 CGGATCTAATCTTCGTTCGTCTAAATT 59.621 37.037 0.00 0.00 0.00 1.82
200 201 8.480853 GGATCTAATCTTCGTTCGTCTAAATTG 58.519 37.037 0.00 0.00 0.00 2.32
201 202 8.928270 ATCTAATCTTCGTTCGTCTAAATTGT 57.072 30.769 0.00 0.00 0.00 2.71
202 203 8.169839 TCTAATCTTCGTTCGTCTAAATTGTG 57.830 34.615 0.00 0.00 0.00 3.33
203 204 6.780706 AATCTTCGTTCGTCTAAATTGTGT 57.219 33.333 0.00 0.00 0.00 3.72
204 205 5.570262 TCTTCGTTCGTCTAAATTGTGTG 57.430 39.130 0.00 0.00 0.00 3.82
205 206 5.045215 TCTTCGTTCGTCTAAATTGTGTGT 58.955 37.500 0.00 0.00 0.00 3.72
206 207 4.959631 TCGTTCGTCTAAATTGTGTGTC 57.040 40.909 0.00 0.00 0.00 3.67
207 208 4.613944 TCGTTCGTCTAAATTGTGTGTCT 58.386 39.130 0.00 0.00 0.00 3.41
208 209 5.045215 TCGTTCGTCTAAATTGTGTGTCTT 58.955 37.500 0.00 0.00 0.00 3.01
209 210 5.174398 TCGTTCGTCTAAATTGTGTGTCTTC 59.826 40.000 0.00 0.00 0.00 2.87
210 211 5.051307 CGTTCGTCTAAATTGTGTGTCTTCA 60.051 40.000 0.00 0.00 0.00 3.02
211 212 6.355638 GTTCGTCTAAATTGTGTGTCTTCAG 58.644 40.000 0.00 0.00 0.00 3.02
212 213 4.988540 TCGTCTAAATTGTGTGTCTTCAGG 59.011 41.667 0.00 0.00 0.00 3.86
213 214 4.750098 CGTCTAAATTGTGTGTCTTCAGGT 59.250 41.667 0.00 0.00 0.00 4.00
214 215 5.236478 CGTCTAAATTGTGTGTCTTCAGGTT 59.764 40.000 0.00 0.00 0.00 3.50
215 216 6.430451 GTCTAAATTGTGTGTCTTCAGGTTG 58.570 40.000 0.00 0.00 0.00 3.77
216 217 6.260050 GTCTAAATTGTGTGTCTTCAGGTTGA 59.740 38.462 0.00 0.00 0.00 3.18
217 218 5.913137 AAATTGTGTGTCTTCAGGTTGAA 57.087 34.783 0.00 0.00 34.79 2.69
218 219 6.469782 AAATTGTGTGTCTTCAGGTTGAAT 57.530 33.333 0.00 0.00 35.59 2.57
219 220 5.695851 ATTGTGTGTCTTCAGGTTGAATC 57.304 39.130 0.00 0.00 35.59 2.52
220 221 3.476552 TGTGTGTCTTCAGGTTGAATCC 58.523 45.455 0.00 0.00 35.59 3.01
221 222 3.136443 TGTGTGTCTTCAGGTTGAATCCT 59.864 43.478 0.00 0.00 35.59 3.24
222 223 4.137543 GTGTGTCTTCAGGTTGAATCCTT 58.862 43.478 0.00 0.00 35.59 3.36
223 224 4.580580 GTGTGTCTTCAGGTTGAATCCTTT 59.419 41.667 0.00 0.00 35.59 3.11
224 225 4.821805 TGTGTCTTCAGGTTGAATCCTTTC 59.178 41.667 0.00 0.00 35.59 2.62
225 226 4.065088 TGTCTTCAGGTTGAATCCTTTCG 58.935 43.478 0.00 0.00 35.59 3.46
226 227 4.202315 TGTCTTCAGGTTGAATCCTTTCGA 60.202 41.667 0.00 0.00 35.59 3.71
227 228 4.152580 GTCTTCAGGTTGAATCCTTTCGAC 59.847 45.833 0.00 0.00 43.07 4.20
228 229 3.762407 TCAGGTTGAATCCTTTCGACA 57.238 42.857 8.05 0.00 44.83 4.35
229 230 4.286297 TCAGGTTGAATCCTTTCGACAT 57.714 40.909 8.05 0.00 44.83 3.06
230 231 5.414789 TCAGGTTGAATCCTTTCGACATA 57.585 39.130 8.05 0.00 44.83 2.29
231 232 5.175859 TCAGGTTGAATCCTTTCGACATAC 58.824 41.667 8.05 0.00 44.83 2.39
232 233 4.032900 CAGGTTGAATCCTTTCGACATACG 59.967 45.833 8.05 0.00 44.83 3.06
233 234 3.242316 GGTTGAATCCTTTCGACATACGC 60.242 47.826 8.05 0.00 44.83 4.42
234 235 3.520290 TGAATCCTTTCGACATACGCT 57.480 42.857 0.00 0.00 42.26 5.07
235 236 3.857052 TGAATCCTTTCGACATACGCTT 58.143 40.909 0.00 0.00 42.26 4.68
236 237 3.863424 TGAATCCTTTCGACATACGCTTC 59.137 43.478 0.00 0.00 42.26 3.86
237 238 3.802948 ATCCTTTCGACATACGCTTCT 57.197 42.857 0.00 0.00 42.26 2.85
238 239 3.146618 TCCTTTCGACATACGCTTCTC 57.853 47.619 0.00 0.00 42.26 2.87
239 240 2.753452 TCCTTTCGACATACGCTTCTCT 59.247 45.455 0.00 0.00 42.26 3.10
240 241 3.192844 TCCTTTCGACATACGCTTCTCTT 59.807 43.478 0.00 0.00 42.26 2.85
241 242 3.548268 CCTTTCGACATACGCTTCTCTTC 59.452 47.826 0.00 0.00 42.26 2.87
242 243 3.842732 TTCGACATACGCTTCTCTTCA 57.157 42.857 0.00 0.00 42.26 3.02
243 244 4.371855 TTCGACATACGCTTCTCTTCAT 57.628 40.909 0.00 0.00 42.26 2.57
244 245 3.953766 TCGACATACGCTTCTCTTCATC 58.046 45.455 0.00 0.00 42.26 2.92
245 246 2.716504 CGACATACGCTTCTCTTCATCG 59.283 50.000 0.00 0.00 34.51 3.84
246 247 3.046390 GACATACGCTTCTCTTCATCGG 58.954 50.000 0.00 0.00 0.00 4.18
247 248 1.789464 CATACGCTTCTCTTCATCGGC 59.211 52.381 0.00 0.00 0.00 5.54
248 249 1.103803 TACGCTTCTCTTCATCGGCT 58.896 50.000 0.00 0.00 0.00 5.52
249 250 0.459237 ACGCTTCTCTTCATCGGCTG 60.459 55.000 0.00 0.00 0.00 4.85
250 251 1.760268 CGCTTCTCTTCATCGGCTGC 61.760 60.000 0.00 0.00 0.00 5.25
251 252 1.760268 GCTTCTCTTCATCGGCTGCG 61.760 60.000 0.00 0.00 0.00 5.18
252 253 1.150567 CTTCTCTTCATCGGCTGCGG 61.151 60.000 0.11 0.11 0.00 5.69
253 254 1.888436 TTCTCTTCATCGGCTGCGGT 61.888 55.000 7.10 0.00 0.00 5.68
254 255 1.448540 CTCTTCATCGGCTGCGGTT 60.449 57.895 7.10 0.00 0.00 4.44
255 256 1.699656 CTCTTCATCGGCTGCGGTTG 61.700 60.000 10.87 10.87 0.00 3.77
256 257 1.741401 CTTCATCGGCTGCGGTTGA 60.741 57.895 14.54 14.54 0.00 3.18
257 258 1.078497 TTCATCGGCTGCGGTTGAT 60.078 52.632 17.88 5.83 0.00 2.57
258 259 1.368345 TTCATCGGCTGCGGTTGATG 61.368 55.000 17.88 17.89 39.59 3.07
259 260 2.108514 CATCGGCTGCGGTTGATGT 61.109 57.895 16.49 0.00 34.83 3.06
260 261 1.377202 ATCGGCTGCGGTTGATGTT 60.377 52.632 7.10 0.00 0.00 2.71
261 262 1.369091 ATCGGCTGCGGTTGATGTTC 61.369 55.000 7.10 0.00 0.00 3.18
262 263 2.034879 CGGCTGCGGTTGATGTTCT 61.035 57.895 0.00 0.00 0.00 3.01
263 264 0.739462 CGGCTGCGGTTGATGTTCTA 60.739 55.000 0.00 0.00 0.00 2.10
264 265 1.009829 GGCTGCGGTTGATGTTCTAG 58.990 55.000 0.00 0.00 0.00 2.43
265 266 1.676014 GGCTGCGGTTGATGTTCTAGT 60.676 52.381 0.00 0.00 0.00 2.57
266 267 1.394917 GCTGCGGTTGATGTTCTAGTG 59.605 52.381 0.00 0.00 0.00 2.74
267 268 1.394917 CTGCGGTTGATGTTCTAGTGC 59.605 52.381 0.00 0.00 0.00 4.40
268 269 0.370273 GCGGTTGATGTTCTAGTGCG 59.630 55.000 0.00 0.00 0.00 5.34
269 270 0.370273 CGGTTGATGTTCTAGTGCGC 59.630 55.000 0.00 0.00 0.00 6.09
270 271 1.726853 GGTTGATGTTCTAGTGCGCT 58.273 50.000 9.73 4.58 0.00 5.92
271 272 1.394917 GGTTGATGTTCTAGTGCGCTG 59.605 52.381 10.80 0.00 0.00 5.18
272 273 1.394917 GTTGATGTTCTAGTGCGCTGG 59.605 52.381 10.80 7.28 0.00 4.85
273 274 0.608130 TGATGTTCTAGTGCGCTGGT 59.392 50.000 10.80 0.00 0.00 4.00
274 275 1.281899 GATGTTCTAGTGCGCTGGTC 58.718 55.000 10.80 5.89 0.00 4.02
275 276 0.108138 ATGTTCTAGTGCGCTGGTCC 60.108 55.000 10.80 2.79 0.00 4.46
276 277 1.185618 TGTTCTAGTGCGCTGGTCCT 61.186 55.000 10.80 0.00 0.00 3.85
277 278 0.815734 GTTCTAGTGCGCTGGTCCTA 59.184 55.000 10.80 0.21 0.00 2.94
278 279 1.409427 GTTCTAGTGCGCTGGTCCTAT 59.591 52.381 10.80 0.00 0.00 2.57
279 280 1.319541 TCTAGTGCGCTGGTCCTATC 58.680 55.000 10.80 0.00 0.00 2.08
280 281 0.039978 CTAGTGCGCTGGTCCTATCG 60.040 60.000 10.80 0.00 0.00 2.92
281 282 1.452953 TAGTGCGCTGGTCCTATCGG 61.453 60.000 10.80 0.00 0.00 4.18
282 283 3.536917 TGCGCTGGTCCTATCGGG 61.537 66.667 9.73 0.00 0.00 5.14
283 284 4.971125 GCGCTGGTCCTATCGGGC 62.971 72.222 0.00 0.00 34.39 6.13
290 291 1.067582 GTCCTATCGGGCCTTCACG 59.932 63.158 0.84 0.00 34.39 4.35
291 292 2.131709 TCCTATCGGGCCTTCACGG 61.132 63.158 0.84 0.00 34.39 4.94
300 301 4.043168 CCTTCACGGCGACTTGTT 57.957 55.556 16.62 0.00 0.00 2.83
301 302 1.569493 CCTTCACGGCGACTTGTTG 59.431 57.895 16.62 0.00 0.00 3.33
302 303 0.878523 CCTTCACGGCGACTTGTTGA 60.879 55.000 16.62 1.90 0.00 3.18
303 304 0.232303 CTTCACGGCGACTTGTTGAC 59.768 55.000 16.62 0.00 0.00 3.18
304 305 0.179094 TTCACGGCGACTTGTTGACT 60.179 50.000 16.62 0.00 0.00 3.41
305 306 0.669619 TCACGGCGACTTGTTGACTA 59.330 50.000 16.62 0.00 0.00 2.59
306 307 1.271379 TCACGGCGACTTGTTGACTAT 59.729 47.619 16.62 0.00 0.00 2.12
307 308 1.654105 CACGGCGACTTGTTGACTATC 59.346 52.381 16.62 0.00 0.00 2.08
308 309 1.544691 ACGGCGACTTGTTGACTATCT 59.455 47.619 16.62 0.00 0.00 1.98
309 310 2.751259 ACGGCGACTTGTTGACTATCTA 59.249 45.455 16.62 0.00 0.00 1.98
310 311 3.380637 ACGGCGACTTGTTGACTATCTAT 59.619 43.478 16.62 0.00 0.00 1.98
311 312 4.142227 ACGGCGACTTGTTGACTATCTATT 60.142 41.667 16.62 0.00 0.00 1.73
312 313 5.066893 ACGGCGACTTGTTGACTATCTATTA 59.933 40.000 16.62 0.00 0.00 0.98
313 314 5.398711 CGGCGACTTGTTGACTATCTATTAC 59.601 44.000 0.00 0.00 0.00 1.89
314 315 6.270815 GGCGACTTGTTGACTATCTATTACA 58.729 40.000 0.00 0.00 0.00 2.41
315 316 6.755141 GGCGACTTGTTGACTATCTATTACAA 59.245 38.462 0.00 0.00 0.00 2.41
316 317 7.254017 GGCGACTTGTTGACTATCTATTACAAC 60.254 40.741 0.00 0.00 40.44 3.32
317 318 7.274904 GCGACTTGTTGACTATCTATTACAACA 59.725 37.037 0.00 0.00 45.36 3.33
318 319 8.584600 CGACTTGTTGACTATCTATTACAACAC 58.415 37.037 0.00 0.00 46.20 3.32
319 320 9.419297 GACTTGTTGACTATCTATTACAACACA 57.581 33.333 0.00 0.00 46.20 3.72
320 321 9.944376 ACTTGTTGACTATCTATTACAACACAT 57.056 29.630 0.00 0.00 46.20 3.21
326 327 9.448438 TGACTATCTATTACAACACATTTTGCT 57.552 29.630 0.00 0.00 0.00 3.91
327 328 9.922305 GACTATCTATTACAACACATTTTGCTC 57.078 33.333 0.00 0.00 0.00 4.26
328 329 8.604035 ACTATCTATTACAACACATTTTGCTCG 58.396 33.333 0.00 0.00 0.00 5.03
329 330 6.176975 TCTATTACAACACATTTTGCTCGG 57.823 37.500 0.00 0.00 0.00 4.63
330 331 2.697431 TACAACACATTTTGCTCGGC 57.303 45.000 0.00 0.00 0.00 5.54
331 332 0.743688 ACAACACATTTTGCTCGGCA 59.256 45.000 0.00 0.00 36.47 5.69
332 333 1.130955 CAACACATTTTGCTCGGCAC 58.869 50.000 0.00 0.00 38.71 5.01
333 334 0.031994 AACACATTTTGCTCGGCACC 59.968 50.000 0.00 0.00 38.71 5.01
334 335 1.106351 ACACATTTTGCTCGGCACCA 61.106 50.000 0.00 0.00 38.71 4.17
335 336 0.387622 CACATTTTGCTCGGCACCAG 60.388 55.000 0.00 0.00 38.71 4.00
336 337 1.444895 CATTTTGCTCGGCACCAGC 60.445 57.895 0.00 4.71 38.71 4.85
337 338 2.981560 ATTTTGCTCGGCACCAGCG 61.982 57.895 0.00 0.00 43.41 5.18
338 339 4.617520 TTTGCTCGGCACCAGCGA 62.618 61.111 0.00 2.95 43.41 4.93
354 355 3.866582 GAGGGAGGGGTGGCGATG 61.867 72.222 0.00 0.00 0.00 3.84
355 356 4.414956 AGGGAGGGGTGGCGATGA 62.415 66.667 0.00 0.00 0.00 2.92
356 357 3.171388 GGGAGGGGTGGCGATGAT 61.171 66.667 0.00 0.00 0.00 2.45
357 358 2.111878 GGAGGGGTGGCGATGATG 59.888 66.667 0.00 0.00 0.00 3.07
358 359 2.443394 GGAGGGGTGGCGATGATGA 61.443 63.158 0.00 0.00 0.00 2.92
359 360 1.227674 GAGGGGTGGCGATGATGAC 60.228 63.158 0.00 0.00 0.00 3.06
360 361 1.971505 GAGGGGTGGCGATGATGACA 61.972 60.000 0.00 0.00 0.00 3.58
361 362 1.149174 GGGGTGGCGATGATGACAT 59.851 57.895 0.00 0.00 39.67 3.06
362 363 1.168407 GGGGTGGCGATGATGACATG 61.168 60.000 0.00 0.00 36.82 3.21
363 364 1.650912 GGTGGCGATGATGACATGC 59.349 57.895 0.00 0.00 36.82 4.06
364 365 1.650912 GTGGCGATGATGACATGCC 59.349 57.895 7.42 7.42 43.76 4.40
365 366 0.816825 GTGGCGATGATGACATGCCT 60.817 55.000 13.86 0.00 43.80 4.75
366 367 0.107066 TGGCGATGATGACATGCCTT 60.107 50.000 13.86 0.00 43.80 4.35
367 368 0.590195 GGCGATGATGACATGCCTTC 59.410 55.000 7.16 0.00 42.10 3.46
368 369 0.234106 GCGATGATGACATGCCTTCG 59.766 55.000 0.00 0.58 36.82 3.79
369 370 0.863799 CGATGATGACATGCCTTCGG 59.136 55.000 0.00 0.00 36.82 4.30
370 371 1.807755 CGATGATGACATGCCTTCGGT 60.808 52.381 0.00 0.00 36.82 4.69
371 372 2.292267 GATGATGACATGCCTTCGGTT 58.708 47.619 0.00 0.00 36.82 4.44
372 373 2.198827 TGATGACATGCCTTCGGTTT 57.801 45.000 0.00 0.00 0.00 3.27
373 374 1.811965 TGATGACATGCCTTCGGTTTG 59.188 47.619 0.00 0.00 0.00 2.93
374 375 0.527565 ATGACATGCCTTCGGTTTGC 59.472 50.000 0.00 0.00 0.00 3.68
375 376 0.537143 TGACATGCCTTCGGTTTGCT 60.537 50.000 0.00 0.00 0.00 3.91
376 377 0.598065 GACATGCCTTCGGTTTGCTT 59.402 50.000 0.00 0.00 0.00 3.91
377 378 0.598065 ACATGCCTTCGGTTTGCTTC 59.402 50.000 0.00 0.00 0.00 3.86
378 379 0.597568 CATGCCTTCGGTTTGCTTCA 59.402 50.000 0.00 0.00 0.00 3.02
379 380 0.883833 ATGCCTTCGGTTTGCTTCAG 59.116 50.000 0.00 0.00 0.00 3.02
380 381 0.465460 TGCCTTCGGTTTGCTTCAGT 60.465 50.000 0.00 0.00 0.00 3.41
381 382 0.040067 GCCTTCGGTTTGCTTCAGTG 60.040 55.000 0.00 0.00 0.00 3.66
382 383 0.593128 CCTTCGGTTTGCTTCAGTGG 59.407 55.000 0.00 0.00 0.00 4.00
383 384 1.308998 CTTCGGTTTGCTTCAGTGGT 58.691 50.000 0.00 0.00 0.00 4.16
384 385 1.676006 CTTCGGTTTGCTTCAGTGGTT 59.324 47.619 0.00 0.00 0.00 3.67
385 386 1.021202 TCGGTTTGCTTCAGTGGTTG 58.979 50.000 0.00 0.00 0.00 3.77
386 387 0.738389 CGGTTTGCTTCAGTGGTTGT 59.262 50.000 0.00 0.00 0.00 3.32
387 388 1.944024 CGGTTTGCTTCAGTGGTTGTA 59.056 47.619 0.00 0.00 0.00 2.41
388 389 2.032030 CGGTTTGCTTCAGTGGTTGTAG 60.032 50.000 0.00 0.00 0.00 2.74
389 390 2.287608 GGTTTGCTTCAGTGGTTGTAGC 60.288 50.000 0.00 0.00 46.82 3.58
390 391 1.604604 TTGCTTCAGTGGTTGTAGCC 58.395 50.000 3.83 0.00 46.29 3.93
391 392 0.602638 TGCTTCAGTGGTTGTAGCCG 60.603 55.000 3.83 0.00 46.29 5.52
392 393 0.602905 GCTTCAGTGGTTGTAGCCGT 60.603 55.000 0.00 0.00 42.48 5.68
393 394 1.429463 CTTCAGTGGTTGTAGCCGTC 58.571 55.000 0.00 0.00 0.00 4.79
394 395 0.319211 TTCAGTGGTTGTAGCCGTCG 60.319 55.000 0.00 0.00 0.00 5.12
395 396 2.048503 AGTGGTTGTAGCCGTCGC 60.049 61.111 0.00 0.00 0.00 5.19
397 398 1.213537 GTGGTTGTAGCCGTCGCTA 59.786 57.895 0.00 0.00 46.08 4.26
403 404 2.439701 TAGCCGTCGCTAGCTGGT 60.440 61.111 13.93 6.74 46.08 4.00
404 405 2.478890 TAGCCGTCGCTAGCTGGTC 61.479 63.158 13.93 8.16 46.08 4.02
405 406 2.888464 TAGCCGTCGCTAGCTGGTCT 62.888 60.000 13.93 14.05 46.08 3.85
406 407 2.478890 GCCGTCGCTAGCTGGTCTA 61.479 63.158 13.93 0.00 0.00 2.59
407 408 1.355916 CCGTCGCTAGCTGGTCTAC 59.644 63.158 13.93 0.65 0.00 2.59
408 409 1.374343 CCGTCGCTAGCTGGTCTACA 61.374 60.000 13.93 0.00 0.00 2.74
426 427 9.739276 TGGTCTACAGATCTGAATGTAATTTTT 57.261 29.630 29.27 4.55 36.07 1.94
450 451 9.826574 TTTATTATTTCTGGTATTCGCTGTACT 57.173 29.630 0.00 0.00 0.00 2.73
453 454 9.640963 ATTATTTCTGGTATTCGCTGTACTATC 57.359 33.333 0.00 0.00 0.00 2.08
454 455 6.459670 TTTCTGGTATTCGCTGTACTATCA 57.540 37.500 0.00 0.00 0.00 2.15
455 456 5.434352 TCTGGTATTCGCTGTACTATCAC 57.566 43.478 0.00 0.00 0.00 3.06
456 457 4.885325 TCTGGTATTCGCTGTACTATCACA 59.115 41.667 0.00 0.00 0.00 3.58
457 458 5.358725 TCTGGTATTCGCTGTACTATCACAA 59.641 40.000 0.00 0.00 0.00 3.33
458 459 6.040504 TCTGGTATTCGCTGTACTATCACAAT 59.959 38.462 0.00 0.00 0.00 2.71
459 460 6.578944 TGGTATTCGCTGTACTATCACAATT 58.421 36.000 0.00 0.00 0.00 2.32
460 461 6.478673 TGGTATTCGCTGTACTATCACAATTG 59.521 38.462 3.24 3.24 0.00 2.32
461 462 6.700081 GGTATTCGCTGTACTATCACAATTGA 59.300 38.462 13.59 0.00 35.73 2.57
462 463 7.385205 GGTATTCGCTGTACTATCACAATTGAT 59.615 37.037 13.59 0.00 45.04 2.57
463 464 6.588348 TTCGCTGTACTATCACAATTGATG 57.412 37.500 13.59 7.05 42.79 3.07
464 465 5.901552 TCGCTGTACTATCACAATTGATGA 58.098 37.500 13.59 12.26 42.79 2.92
465 466 6.515832 TCGCTGTACTATCACAATTGATGAT 58.484 36.000 13.59 17.89 42.79 2.45
466 467 6.421801 TCGCTGTACTATCACAATTGATGATG 59.578 38.462 22.83 17.39 42.79 3.07
467 468 6.421801 CGCTGTACTATCACAATTGATGATGA 59.578 38.462 22.83 13.66 42.79 2.92
468 469 7.117379 CGCTGTACTATCACAATTGATGATGAT 59.883 37.037 22.83 18.11 42.79 2.45
469 470 8.781196 GCTGTACTATCACAATTGATGATGATT 58.219 33.333 22.83 14.12 42.79 2.57
486 487 9.443283 GATGATGATTAGATCAAAAGTTTTCCG 57.557 33.333 0.00 0.00 43.50 4.30
487 488 7.761409 TGATGATTAGATCAAAAGTTTTCCGG 58.239 34.615 0.00 0.00 43.50 5.14
488 489 5.949735 TGATTAGATCAAAAGTTTTCCGGC 58.050 37.500 0.00 0.00 36.11 6.13
489 490 5.475220 TGATTAGATCAAAAGTTTTCCGGCA 59.525 36.000 0.00 0.00 36.11 5.69
490 491 5.776173 TTAGATCAAAAGTTTTCCGGCAA 57.224 34.783 0.00 0.00 0.00 4.52
491 492 4.664150 AGATCAAAAGTTTTCCGGCAAA 57.336 36.364 0.00 0.00 0.00 3.68
492 493 5.017294 AGATCAAAAGTTTTCCGGCAAAA 57.983 34.783 0.00 4.37 0.00 2.44
493 494 5.423886 AGATCAAAAGTTTTCCGGCAAAAA 58.576 33.333 0.00 0.00 35.68 1.94
536 537 2.029649 ACGCTAGTAGAAAAACCGCTCA 60.030 45.455 0.00 0.00 0.00 4.26
542 543 1.226746 AGAAAAACCGCTCACCTTCG 58.773 50.000 0.00 0.00 0.00 3.79
543 544 0.385598 GAAAAACCGCTCACCTTCGC 60.386 55.000 0.00 0.00 0.00 4.70
545 546 1.507141 AAAACCGCTCACCTTCGCAG 61.507 55.000 0.00 0.00 0.00 5.18
561 562 1.506493 GCAGGTGGCTCTCATATTCG 58.494 55.000 0.00 0.00 40.25 3.34
564 565 3.126831 CAGGTGGCTCTCATATTCGTTC 58.873 50.000 0.00 0.00 0.00 3.95
574 575 3.935203 CTCATATTCGTTCTGGTGCAAGT 59.065 43.478 0.00 0.00 0.00 3.16
575 576 3.684305 TCATATTCGTTCTGGTGCAAGTG 59.316 43.478 0.00 0.00 0.00 3.16
588 604 1.330306 GCAAGTGCGCAAGTAACATG 58.670 50.000 14.00 3.37 41.68 3.21
639 660 1.851304 ATGCCCACGAAATCAACCAT 58.149 45.000 0.00 0.00 0.00 3.55
643 664 2.017049 CCCACGAAATCAACCATCCTC 58.983 52.381 0.00 0.00 0.00 3.71
644 665 2.017049 CCACGAAATCAACCATCCTCC 58.983 52.381 0.00 0.00 0.00 4.30
666 687 4.141937 CCGGAGACATCTAGGAAATTCACA 60.142 45.833 0.00 0.00 0.00 3.58
758 785 9.080097 AGAAGACTTCCATAGCGTATATTAGTT 57.920 33.333 11.67 0.00 0.00 2.24
803 857 9.914834 TGGCTTAACTAGTCATGGTTATAATTT 57.085 29.630 0.00 0.00 32.31 1.82
871 935 2.057140 ACCCTGGTAGATGCATGCATA 58.943 47.619 32.27 16.12 36.70 3.14
945 1019 7.132213 CCTATATAACGGCAACTTGAACATTG 58.868 38.462 0.00 0.00 0.00 2.82
966 1041 1.455959 CCTAGCTAGGACACCCGCT 60.456 63.158 32.79 0.00 46.63 5.52
967 1042 1.043673 CCTAGCTAGGACACCCGCTT 61.044 60.000 32.79 0.00 46.63 4.68
969 1044 0.613853 TAGCTAGGACACCCGCTTGT 60.614 55.000 7.32 0.00 37.58 3.16
983 1058 1.201812 CGCTTGTCCAAATCGAGAACG 60.202 52.381 0.00 0.00 41.26 3.95
1028 1107 1.612676 TCTTCTTCTCCGTCGTCCAA 58.387 50.000 0.00 0.00 0.00 3.53
1037 1116 2.048503 GTCGTCCAAGGTGACCCG 60.049 66.667 0.00 0.00 35.12 5.28
1038 1117 3.998672 TCGTCCAAGGTGACCCGC 61.999 66.667 0.00 0.00 35.12 6.13
1056 1135 1.742411 CGCATAACTCCACCGACCAAT 60.742 52.381 0.00 0.00 0.00 3.16
1067 1146 3.070060 GACCAATGACGTCGACGC 58.930 61.111 35.92 27.26 44.43 5.19
1477 1568 1.740296 GGCTTCTTCGCCGCAGTTA 60.740 57.895 0.00 0.00 40.79 2.24
1645 1737 2.310538 GGAAGGGCATCGGATTCAATT 58.689 47.619 0.00 0.00 0.00 2.32
1714 1811 6.777580 AGTTTGATTCCCACAAGTGTAAGAAT 59.222 34.615 7.48 7.48 33.99 2.40
1715 1812 6.573664 TTGATTCCCACAAGTGTAAGAATG 57.426 37.500 11.01 0.00 32.49 2.67
1718 1817 6.947733 TGATTCCCACAAGTGTAAGAATGAAT 59.052 34.615 11.01 0.00 32.49 2.57
1847 1946 6.704310 TGTCCTTGTATTGTAGGGTTTACTC 58.296 40.000 0.00 0.00 32.20 2.59
1862 1961 6.776603 AGGGTTTACTCGTTATAGTGCTATCT 59.223 38.462 0.00 0.00 0.00 1.98
1868 1967 7.578310 ACTCGTTATAGTGCTATCTGGTTTA 57.422 36.000 0.00 0.00 0.00 2.01
2159 2278 8.664798 ACCTGTTTTCTGTTTTATTTCTTTTGC 58.335 29.630 0.00 0.00 0.00 3.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 9.952188 TGAAACACACACGAAAAATATCATAAA 57.048 25.926 0.00 0.00 0.00 1.40
5 6 9.952188 TTTGAAACACACACGAAAAATATCATA 57.048 25.926 0.00 0.00 0.00 2.15
6 7 8.864069 TTTGAAACACACACGAAAAATATCAT 57.136 26.923 0.00 0.00 0.00 2.45
7 8 7.971168 ACTTTGAAACACACACGAAAAATATCA 59.029 29.630 0.00 0.00 0.00 2.15
8 9 8.259194 CACTTTGAAACACACACGAAAAATATC 58.741 33.333 0.00 0.00 0.00 1.63
9 10 7.253950 GCACTTTGAAACACACACGAAAAATAT 60.254 33.333 0.00 0.00 0.00 1.28
10 11 6.034044 GCACTTTGAAACACACACGAAAAATA 59.966 34.615 0.00 0.00 0.00 1.40
11 12 5.164002 GCACTTTGAAACACACACGAAAAAT 60.164 36.000 0.00 0.00 0.00 1.82
12 13 4.149046 GCACTTTGAAACACACACGAAAAA 59.851 37.500 0.00 0.00 0.00 1.94
13 14 3.670991 GCACTTTGAAACACACACGAAAA 59.329 39.130 0.00 0.00 0.00 2.29
14 15 3.238441 GCACTTTGAAACACACACGAAA 58.762 40.909 0.00 0.00 0.00 3.46
15 16 2.226674 TGCACTTTGAAACACACACGAA 59.773 40.909 0.00 0.00 0.00 3.85
16 17 1.807142 TGCACTTTGAAACACACACGA 59.193 42.857 0.00 0.00 0.00 4.35
17 18 2.254918 TGCACTTTGAAACACACACG 57.745 45.000 0.00 0.00 0.00 4.49
18 19 7.922505 TTATTATGCACTTTGAAACACACAC 57.077 32.000 0.00 0.00 0.00 3.82
19 20 8.518151 CATTATTATGCACTTTGAAACACACA 57.482 30.769 0.00 0.00 0.00 3.72
41 42 9.289303 GATTTTGTTCATATACGACAAAGCATT 57.711 29.630 0.00 0.00 42.25 3.56
42 43 7.915397 GGATTTTGTTCATATACGACAAAGCAT 59.085 33.333 0.00 3.81 42.25 3.79
43 44 7.247728 GGATTTTGTTCATATACGACAAAGCA 58.752 34.615 0.00 0.32 42.25 3.91
44 45 6.410914 CGGATTTTGTTCATATACGACAAAGC 59.589 38.462 0.00 6.86 42.25 3.51
45 46 7.680982 TCGGATTTTGTTCATATACGACAAAG 58.319 34.615 0.00 1.84 42.25 2.77
46 47 7.598189 TCGGATTTTGTTCATATACGACAAA 57.402 32.000 0.00 6.20 40.39 2.83
47 48 7.598189 TTCGGATTTTGTTCATATACGACAA 57.402 32.000 0.00 0.00 34.59 3.18
48 49 7.598189 TTTCGGATTTTGTTCATATACGACA 57.402 32.000 0.00 0.00 34.59 4.35
49 50 8.332464 TGATTTCGGATTTTGTTCATATACGAC 58.668 33.333 0.00 0.00 34.59 4.34
50 51 8.332464 GTGATTTCGGATTTTGTTCATATACGA 58.668 33.333 0.00 0.00 33.10 3.43
51 52 7.317970 CGTGATTTCGGATTTTGTTCATATACG 59.682 37.037 0.00 0.00 0.00 3.06
52 53 8.332464 TCGTGATTTCGGATTTTGTTCATATAC 58.668 33.333 0.00 0.00 0.00 1.47
53 54 8.426881 TCGTGATTTCGGATTTTGTTCATATA 57.573 30.769 0.00 0.00 0.00 0.86
54 55 7.315247 TCGTGATTTCGGATTTTGTTCATAT 57.685 32.000 0.00 0.00 0.00 1.78
55 56 6.729391 TCGTGATTTCGGATTTTGTTCATA 57.271 33.333 0.00 0.00 0.00 2.15
56 57 5.621197 TCGTGATTTCGGATTTTGTTCAT 57.379 34.783 0.00 0.00 0.00 2.57
57 58 5.425577 TTCGTGATTTCGGATTTTGTTCA 57.574 34.783 0.00 0.00 0.00 3.18
58 59 6.314784 AGATTCGTGATTTCGGATTTTGTTC 58.685 36.000 0.00 0.00 0.00 3.18
59 60 6.254281 AGATTCGTGATTTCGGATTTTGTT 57.746 33.333 0.00 0.00 0.00 2.83
60 61 5.163754 GGAGATTCGTGATTTCGGATTTTGT 60.164 40.000 0.00 0.00 0.00 2.83
61 62 5.163764 TGGAGATTCGTGATTTCGGATTTTG 60.164 40.000 0.00 0.00 0.00 2.44
62 63 4.941263 TGGAGATTCGTGATTTCGGATTTT 59.059 37.500 0.00 0.00 0.00 1.82
63 64 4.513442 TGGAGATTCGTGATTTCGGATTT 58.487 39.130 0.00 0.00 0.00 2.17
64 65 4.137116 TGGAGATTCGTGATTTCGGATT 57.863 40.909 0.00 0.00 0.00 3.01
65 66 3.819564 TGGAGATTCGTGATTTCGGAT 57.180 42.857 0.00 0.00 0.00 4.18
66 67 3.259064 GTTGGAGATTCGTGATTTCGGA 58.741 45.455 0.00 0.00 0.00 4.55
67 68 3.000041 TGTTGGAGATTCGTGATTTCGG 59.000 45.455 0.00 0.00 0.00 4.30
68 69 3.431912 TGTGTTGGAGATTCGTGATTTCG 59.568 43.478 0.00 0.00 0.00 3.46
69 70 5.551760 ATGTGTTGGAGATTCGTGATTTC 57.448 39.130 0.00 0.00 0.00 2.17
70 71 5.473162 TGAATGTGTTGGAGATTCGTGATTT 59.527 36.000 0.00 0.00 37.19 2.17
71 72 5.003160 TGAATGTGTTGGAGATTCGTGATT 58.997 37.500 0.00 0.00 37.19 2.57
72 73 4.578871 TGAATGTGTTGGAGATTCGTGAT 58.421 39.130 0.00 0.00 37.19 3.06
73 74 4.001618 TGAATGTGTTGGAGATTCGTGA 57.998 40.909 0.00 0.00 37.19 4.35
74 75 4.024133 TGTTGAATGTGTTGGAGATTCGTG 60.024 41.667 0.00 0.00 37.19 4.35
75 76 4.024048 GTGTTGAATGTGTTGGAGATTCGT 60.024 41.667 0.00 0.00 37.19 3.85
76 77 4.214119 AGTGTTGAATGTGTTGGAGATTCG 59.786 41.667 0.00 0.00 37.19 3.34
77 78 5.695851 AGTGTTGAATGTGTTGGAGATTC 57.304 39.130 0.00 0.00 35.35 2.52
78 79 5.221303 CCAAGTGTTGAATGTGTTGGAGATT 60.221 40.000 0.00 0.00 37.25 2.40
79 80 4.279169 CCAAGTGTTGAATGTGTTGGAGAT 59.721 41.667 0.00 0.00 37.25 2.75
80 81 3.631686 CCAAGTGTTGAATGTGTTGGAGA 59.368 43.478 0.00 0.00 37.25 3.71
81 82 3.381272 ACCAAGTGTTGAATGTGTTGGAG 59.619 43.478 5.93 0.00 38.26 3.86
82 83 3.360867 ACCAAGTGTTGAATGTGTTGGA 58.639 40.909 5.93 0.00 38.26 3.53
83 84 3.130164 TGACCAAGTGTTGAATGTGTTGG 59.870 43.478 0.00 0.00 40.30 3.77
84 85 4.368874 TGACCAAGTGTTGAATGTGTTG 57.631 40.909 0.00 0.00 0.00 3.33
85 86 5.350633 CATTGACCAAGTGTTGAATGTGTT 58.649 37.500 0.00 0.00 0.00 3.32
86 87 4.737352 GCATTGACCAAGTGTTGAATGTGT 60.737 41.667 0.00 0.00 33.11 3.72
87 88 3.737266 GCATTGACCAAGTGTTGAATGTG 59.263 43.478 0.00 0.00 33.11 3.21
88 89 3.384146 TGCATTGACCAAGTGTTGAATGT 59.616 39.130 0.00 0.00 33.11 2.71
89 90 3.737266 GTGCATTGACCAAGTGTTGAATG 59.263 43.478 0.00 0.00 33.43 2.67
90 91 3.384146 TGTGCATTGACCAAGTGTTGAAT 59.616 39.130 0.00 0.00 0.00 2.57
91 92 2.757314 TGTGCATTGACCAAGTGTTGAA 59.243 40.909 0.00 0.00 0.00 2.69
92 93 2.098934 GTGTGCATTGACCAAGTGTTGA 59.901 45.455 0.00 0.00 0.00 3.18
93 94 2.099592 AGTGTGCATTGACCAAGTGTTG 59.900 45.455 0.00 0.00 0.00 3.33
94 95 2.378038 AGTGTGCATTGACCAAGTGTT 58.622 42.857 0.00 0.00 0.00 3.32
95 96 2.057137 AGTGTGCATTGACCAAGTGT 57.943 45.000 0.00 0.00 0.00 3.55
96 97 3.441496 AAAGTGTGCATTGACCAAGTG 57.559 42.857 0.00 0.00 0.00 3.16
97 98 6.003950 ACTATAAAGTGTGCATTGACCAAGT 58.996 36.000 0.00 0.00 33.57 3.16
98 99 6.403636 GGACTATAAAGTGTGCATTGACCAAG 60.404 42.308 0.00 0.00 35.56 3.61
99 100 5.414454 GGACTATAAAGTGTGCATTGACCAA 59.586 40.000 0.00 0.00 35.56 3.67
100 101 4.941263 GGACTATAAAGTGTGCATTGACCA 59.059 41.667 0.00 0.00 35.56 4.02
101 102 5.186198 AGGACTATAAAGTGTGCATTGACC 58.814 41.667 0.00 0.00 35.56 4.02
102 103 5.005779 CGAGGACTATAAAGTGTGCATTGAC 59.994 44.000 0.00 0.00 35.56 3.18
103 104 5.109210 CGAGGACTATAAAGTGTGCATTGA 58.891 41.667 0.00 0.00 35.56 2.57
104 105 4.260375 GCGAGGACTATAAAGTGTGCATTG 60.260 45.833 0.00 0.00 35.56 2.82
105 106 3.871594 GCGAGGACTATAAAGTGTGCATT 59.128 43.478 0.00 0.00 35.56 3.56
106 107 3.133003 AGCGAGGACTATAAAGTGTGCAT 59.867 43.478 0.00 0.00 35.56 3.96
107 108 2.496070 AGCGAGGACTATAAAGTGTGCA 59.504 45.455 0.00 0.00 35.56 4.57
108 109 2.860735 CAGCGAGGACTATAAAGTGTGC 59.139 50.000 0.00 0.00 35.56 4.57
109 110 4.111375 ACAGCGAGGACTATAAAGTGTG 57.889 45.455 0.00 0.00 35.56 3.82
110 111 7.762588 ATATACAGCGAGGACTATAAAGTGT 57.237 36.000 0.00 0.00 35.56 3.55
118 119 9.639601 CAAATCATTAATATACAGCGAGGACTA 57.360 33.333 0.00 0.00 0.00 2.59
119 120 7.604164 CCAAATCATTAATATACAGCGAGGACT 59.396 37.037 0.00 0.00 0.00 3.85
120 121 7.387948 ACCAAATCATTAATATACAGCGAGGAC 59.612 37.037 0.00 0.00 0.00 3.85
121 122 7.450074 ACCAAATCATTAATATACAGCGAGGA 58.550 34.615 0.00 0.00 0.00 3.71
122 123 7.387673 TGACCAAATCATTAATATACAGCGAGG 59.612 37.037 0.00 0.00 29.99 4.63
123 124 8.310406 TGACCAAATCATTAATATACAGCGAG 57.690 34.615 0.00 0.00 29.99 5.03
124 125 7.931407 ACTGACCAAATCATTAATATACAGCGA 59.069 33.333 0.00 0.00 36.48 4.93
125 126 8.087982 ACTGACCAAATCATTAATATACAGCG 57.912 34.615 0.00 0.00 36.48 5.18
133 134 9.520515 AAGACAACTACTGACCAAATCATTAAT 57.479 29.630 0.00 0.00 36.48 1.40
134 135 8.918202 AAGACAACTACTGACCAAATCATTAA 57.082 30.769 0.00 0.00 36.48 1.40
135 136 8.783093 CAAAGACAACTACTGACCAAATCATTA 58.217 33.333 0.00 0.00 36.48 1.90
136 137 7.255590 CCAAAGACAACTACTGACCAAATCATT 60.256 37.037 0.00 0.00 36.48 2.57
137 138 6.207417 CCAAAGACAACTACTGACCAAATCAT 59.793 38.462 0.00 0.00 36.48 2.45
138 139 5.530915 CCAAAGACAACTACTGACCAAATCA 59.469 40.000 0.00 0.00 35.45 2.57
139 140 5.531287 ACCAAAGACAACTACTGACCAAATC 59.469 40.000 0.00 0.00 0.00 2.17
140 141 5.299279 CACCAAAGACAACTACTGACCAAAT 59.701 40.000 0.00 0.00 0.00 2.32
141 142 4.638421 CACCAAAGACAACTACTGACCAAA 59.362 41.667 0.00 0.00 0.00 3.28
142 143 4.196193 CACCAAAGACAACTACTGACCAA 58.804 43.478 0.00 0.00 0.00 3.67
143 144 3.433031 CCACCAAAGACAACTACTGACCA 60.433 47.826 0.00 0.00 0.00 4.02
144 145 3.139077 CCACCAAAGACAACTACTGACC 58.861 50.000 0.00 0.00 0.00 4.02
145 146 4.067972 TCCACCAAAGACAACTACTGAC 57.932 45.455 0.00 0.00 0.00 3.51
146 147 4.262894 GGATCCACCAAAGACAACTACTGA 60.263 45.833 6.95 0.00 38.79 3.41
147 148 4.003648 GGATCCACCAAAGACAACTACTG 58.996 47.826 6.95 0.00 38.79 2.74
148 149 3.650942 TGGATCCACCAAAGACAACTACT 59.349 43.478 11.44 0.00 46.75 2.57
149 150 4.015872 TGGATCCACCAAAGACAACTAC 57.984 45.455 11.44 0.00 46.75 2.73
168 169 3.992260 ACGAAGATTAGATCCGAGTGG 57.008 47.619 0.00 0.00 0.00 4.00
169 170 3.969352 CGAACGAAGATTAGATCCGAGTG 59.031 47.826 0.00 0.00 0.00 3.51
170 171 3.626670 ACGAACGAAGATTAGATCCGAGT 59.373 43.478 0.14 0.00 0.00 4.18
171 172 4.024725 AGACGAACGAAGATTAGATCCGAG 60.025 45.833 0.14 0.00 0.00 4.63
172 173 3.875727 AGACGAACGAAGATTAGATCCGA 59.124 43.478 0.14 0.00 0.00 4.55
173 174 4.212213 AGACGAACGAAGATTAGATCCG 57.788 45.455 0.14 0.00 0.00 4.18
174 175 8.480853 CAATTTAGACGAACGAAGATTAGATCC 58.519 37.037 0.14 0.00 0.00 3.36
175 176 9.021863 ACAATTTAGACGAACGAAGATTAGATC 57.978 33.333 0.14 0.00 0.00 2.75
176 177 8.808529 CACAATTTAGACGAACGAAGATTAGAT 58.191 33.333 0.14 0.00 0.00 1.98
177 178 7.811236 ACACAATTTAGACGAACGAAGATTAGA 59.189 33.333 0.14 0.00 0.00 2.10
178 179 7.893236 CACACAATTTAGACGAACGAAGATTAG 59.107 37.037 0.14 0.00 0.00 1.73
179 180 7.383029 ACACACAATTTAGACGAACGAAGATTA 59.617 33.333 0.14 0.00 0.00 1.75
180 181 6.202188 ACACACAATTTAGACGAACGAAGATT 59.798 34.615 0.14 0.00 0.00 2.40
181 182 5.694910 ACACACAATTTAGACGAACGAAGAT 59.305 36.000 0.14 0.00 0.00 2.40
182 183 5.045215 ACACACAATTTAGACGAACGAAGA 58.955 37.500 0.14 0.00 0.00 2.87
183 184 5.175126 AGACACACAATTTAGACGAACGAAG 59.825 40.000 0.14 0.00 0.00 3.79
184 185 5.045215 AGACACACAATTTAGACGAACGAA 58.955 37.500 0.14 0.00 0.00 3.85
185 186 4.613944 AGACACACAATTTAGACGAACGA 58.386 39.130 0.14 0.00 0.00 3.85
186 187 4.966850 AGACACACAATTTAGACGAACG 57.033 40.909 0.00 0.00 0.00 3.95
187 188 6.281848 TGAAGACACACAATTTAGACGAAC 57.718 37.500 0.00 0.00 0.00 3.95
188 189 5.465390 CCTGAAGACACACAATTTAGACGAA 59.535 40.000 0.00 0.00 0.00 3.85
189 190 4.988540 CCTGAAGACACACAATTTAGACGA 59.011 41.667 0.00 0.00 0.00 4.20
190 191 4.750098 ACCTGAAGACACACAATTTAGACG 59.250 41.667 0.00 0.00 0.00 4.18
191 192 6.260050 TCAACCTGAAGACACACAATTTAGAC 59.740 38.462 0.00 0.00 0.00 2.59
192 193 6.353323 TCAACCTGAAGACACACAATTTAGA 58.647 36.000 0.00 0.00 0.00 2.10
193 194 6.618287 TCAACCTGAAGACACACAATTTAG 57.382 37.500 0.00 0.00 0.00 1.85
194 195 7.255451 GGATTCAACCTGAAGACACACAATTTA 60.255 37.037 0.00 0.00 40.05 1.40
195 196 5.913137 TTCAACCTGAAGACACACAATTT 57.087 34.783 0.00 0.00 31.83 1.82
196 197 5.010012 GGATTCAACCTGAAGACACACAATT 59.990 40.000 0.00 0.00 40.05 2.32
197 198 4.520492 GGATTCAACCTGAAGACACACAAT 59.480 41.667 0.00 0.00 40.05 2.71
198 199 3.882888 GGATTCAACCTGAAGACACACAA 59.117 43.478 0.00 0.00 40.05 3.33
199 200 3.136443 AGGATTCAACCTGAAGACACACA 59.864 43.478 0.00 0.00 40.05 3.72
200 201 3.744660 AGGATTCAACCTGAAGACACAC 58.255 45.455 0.00 0.00 40.05 3.82
201 202 4.437682 AAGGATTCAACCTGAAGACACA 57.562 40.909 0.00 0.00 40.05 3.72
202 203 4.083802 CGAAAGGATTCAACCTGAAGACAC 60.084 45.833 0.00 0.00 40.05 3.67
203 204 4.065088 CGAAAGGATTCAACCTGAAGACA 58.935 43.478 0.00 0.00 40.05 3.41
204 205 4.152580 GTCGAAAGGATTCAACCTGAAGAC 59.847 45.833 0.00 0.00 40.05 3.01
205 206 4.202315 TGTCGAAAGGATTCAACCTGAAGA 60.202 41.667 0.00 0.00 40.05 2.87
206 207 4.065088 TGTCGAAAGGATTCAACCTGAAG 58.935 43.478 0.00 0.00 40.05 3.02
207 208 4.079980 TGTCGAAAGGATTCAACCTGAA 57.920 40.909 0.00 0.00 41.09 3.02
208 209 3.762407 TGTCGAAAGGATTCAACCTGA 57.238 42.857 0.00 0.00 40.49 3.86
209 210 4.032900 CGTATGTCGAAAGGATTCAACCTG 59.967 45.833 0.00 0.00 42.86 4.00
210 211 4.181578 CGTATGTCGAAAGGATTCAACCT 58.818 43.478 0.00 0.00 42.86 3.50
211 212 3.242316 GCGTATGTCGAAAGGATTCAACC 60.242 47.826 0.00 0.00 42.86 3.77
212 213 3.617263 AGCGTATGTCGAAAGGATTCAAC 59.383 43.478 0.00 0.00 42.86 3.18
213 214 3.857052 AGCGTATGTCGAAAGGATTCAA 58.143 40.909 0.00 0.00 42.86 2.69
214 215 3.520290 AGCGTATGTCGAAAGGATTCA 57.480 42.857 0.00 0.00 42.86 2.57
215 216 4.113354 AGAAGCGTATGTCGAAAGGATTC 58.887 43.478 0.00 0.00 42.86 2.52
216 217 4.113354 GAGAAGCGTATGTCGAAAGGATT 58.887 43.478 0.00 0.00 42.86 3.01
217 218 3.381908 AGAGAAGCGTATGTCGAAAGGAT 59.618 43.478 0.00 0.00 42.86 3.24
218 219 2.753452 AGAGAAGCGTATGTCGAAAGGA 59.247 45.455 0.00 0.00 42.86 3.36
219 220 3.152261 AGAGAAGCGTATGTCGAAAGG 57.848 47.619 0.00 0.00 42.86 3.11
220 221 4.166523 TGAAGAGAAGCGTATGTCGAAAG 58.833 43.478 0.00 0.00 42.86 2.62
221 222 4.168922 TGAAGAGAAGCGTATGTCGAAA 57.831 40.909 0.00 0.00 42.86 3.46
222 223 3.842732 TGAAGAGAAGCGTATGTCGAA 57.157 42.857 0.00 0.00 42.86 3.71
223 224 3.546218 CGATGAAGAGAAGCGTATGTCGA 60.546 47.826 0.00 0.00 42.86 4.20
224 225 2.716504 CGATGAAGAGAAGCGTATGTCG 59.283 50.000 0.00 0.00 43.12 4.35
225 226 3.046390 CCGATGAAGAGAAGCGTATGTC 58.954 50.000 0.00 0.00 0.00 3.06
226 227 2.799917 GCCGATGAAGAGAAGCGTATGT 60.800 50.000 0.00 0.00 0.00 2.29
227 228 1.789464 GCCGATGAAGAGAAGCGTATG 59.211 52.381 0.00 0.00 0.00 2.39
228 229 1.683917 AGCCGATGAAGAGAAGCGTAT 59.316 47.619 0.00 0.00 0.00 3.06
229 230 1.103803 AGCCGATGAAGAGAAGCGTA 58.896 50.000 0.00 0.00 0.00 4.42
230 231 0.459237 CAGCCGATGAAGAGAAGCGT 60.459 55.000 0.00 0.00 0.00 5.07
231 232 1.760268 GCAGCCGATGAAGAGAAGCG 61.760 60.000 0.00 0.00 0.00 4.68
232 233 1.760268 CGCAGCCGATGAAGAGAAGC 61.760 60.000 0.00 0.00 36.29 3.86
233 234 1.150567 CCGCAGCCGATGAAGAGAAG 61.151 60.000 0.00 0.00 36.29 2.85
234 235 1.153568 CCGCAGCCGATGAAGAGAA 60.154 57.895 0.00 0.00 36.29 2.87
235 236 1.888436 AACCGCAGCCGATGAAGAGA 61.888 55.000 0.00 0.00 36.29 3.10
236 237 1.448540 AACCGCAGCCGATGAAGAG 60.449 57.895 0.00 0.00 36.29 2.85
237 238 1.741401 CAACCGCAGCCGATGAAGA 60.741 57.895 0.00 0.00 36.29 2.87
238 239 1.091771 ATCAACCGCAGCCGATGAAG 61.092 55.000 0.00 0.00 35.09 3.02
239 240 1.078497 ATCAACCGCAGCCGATGAA 60.078 52.632 0.00 0.00 35.09 2.57
240 241 1.815003 CATCAACCGCAGCCGATGA 60.815 57.895 0.00 0.00 37.97 2.92
241 242 1.647545 AACATCAACCGCAGCCGATG 61.648 55.000 0.00 0.00 40.84 3.84
242 243 1.369091 GAACATCAACCGCAGCCGAT 61.369 55.000 0.00 0.00 36.29 4.18
243 244 2.031919 AACATCAACCGCAGCCGA 59.968 55.556 0.00 0.00 36.29 5.54
244 245 0.739462 TAGAACATCAACCGCAGCCG 60.739 55.000 0.00 0.00 0.00 5.52
245 246 1.009829 CTAGAACATCAACCGCAGCC 58.990 55.000 0.00 0.00 0.00 4.85
246 247 1.394917 CACTAGAACATCAACCGCAGC 59.605 52.381 0.00 0.00 0.00 5.25
247 248 1.394917 GCACTAGAACATCAACCGCAG 59.605 52.381 0.00 0.00 0.00 5.18
248 249 1.438651 GCACTAGAACATCAACCGCA 58.561 50.000 0.00 0.00 0.00 5.69
249 250 0.370273 CGCACTAGAACATCAACCGC 59.630 55.000 0.00 0.00 0.00 5.68
250 251 0.370273 GCGCACTAGAACATCAACCG 59.630 55.000 0.30 0.00 0.00 4.44
251 252 1.394917 CAGCGCACTAGAACATCAACC 59.605 52.381 11.47 0.00 0.00 3.77
252 253 1.394917 CCAGCGCACTAGAACATCAAC 59.605 52.381 11.47 0.00 0.00 3.18
253 254 1.001974 ACCAGCGCACTAGAACATCAA 59.998 47.619 11.47 0.00 0.00 2.57
254 255 0.608130 ACCAGCGCACTAGAACATCA 59.392 50.000 11.47 0.00 0.00 3.07
255 256 1.281899 GACCAGCGCACTAGAACATC 58.718 55.000 11.47 0.00 0.00 3.06
256 257 0.108138 GGACCAGCGCACTAGAACAT 60.108 55.000 11.47 0.00 0.00 2.71
257 258 1.185618 AGGACCAGCGCACTAGAACA 61.186 55.000 11.47 0.00 0.00 3.18
258 259 0.815734 TAGGACCAGCGCACTAGAAC 59.184 55.000 11.47 0.00 0.00 3.01
259 260 1.681793 GATAGGACCAGCGCACTAGAA 59.318 52.381 11.47 0.00 0.00 2.10
260 261 1.319541 GATAGGACCAGCGCACTAGA 58.680 55.000 11.47 0.00 0.00 2.43
261 262 0.039978 CGATAGGACCAGCGCACTAG 60.040 60.000 11.47 0.00 0.00 2.57
262 263 2.030551 CGATAGGACCAGCGCACTA 58.969 57.895 11.47 4.17 0.00 2.74
263 264 2.808315 CGATAGGACCAGCGCACT 59.192 61.111 11.47 1.70 0.00 4.40
283 284 0.878523 TCAACAAGTCGCCGTGAAGG 60.879 55.000 0.00 0.00 44.97 3.46
284 285 0.232303 GTCAACAAGTCGCCGTGAAG 59.768 55.000 0.00 0.00 0.00 3.02
285 286 0.179094 AGTCAACAAGTCGCCGTGAA 60.179 50.000 0.00 0.00 0.00 3.18
286 287 0.669619 TAGTCAACAAGTCGCCGTGA 59.330 50.000 0.00 0.00 0.00 4.35
287 288 1.654105 GATAGTCAACAAGTCGCCGTG 59.346 52.381 0.00 0.00 0.00 4.94
288 289 1.544691 AGATAGTCAACAAGTCGCCGT 59.455 47.619 0.00 0.00 0.00 5.68
289 290 2.279582 AGATAGTCAACAAGTCGCCG 57.720 50.000 0.00 0.00 0.00 6.46
290 291 6.270815 TGTAATAGATAGTCAACAAGTCGCC 58.729 40.000 0.00 0.00 0.00 5.54
291 292 7.274904 TGTTGTAATAGATAGTCAACAAGTCGC 59.725 37.037 6.57 0.00 43.02 5.19
292 293 8.584600 GTGTTGTAATAGATAGTCAACAAGTCG 58.415 37.037 9.92 0.00 45.83 4.18
293 294 9.419297 TGTGTTGTAATAGATAGTCAACAAGTC 57.581 33.333 9.92 1.14 45.83 3.01
294 295 9.944376 ATGTGTTGTAATAGATAGTCAACAAGT 57.056 29.630 9.92 1.33 45.83 3.16
300 301 9.448438 AGCAAAATGTGTTGTAATAGATAGTCA 57.552 29.630 0.00 0.00 0.00 3.41
301 302 9.922305 GAGCAAAATGTGTTGTAATAGATAGTC 57.078 33.333 0.00 0.00 0.00 2.59
302 303 8.604035 CGAGCAAAATGTGTTGTAATAGATAGT 58.396 33.333 0.00 0.00 0.00 2.12
303 304 8.064222 CCGAGCAAAATGTGTTGTAATAGATAG 58.936 37.037 0.00 0.00 0.00 2.08
304 305 7.466725 GCCGAGCAAAATGTGTTGTAATAGATA 60.467 37.037 0.00 0.00 0.00 1.98
305 306 6.677920 GCCGAGCAAAATGTGTTGTAATAGAT 60.678 38.462 0.00 0.00 0.00 1.98
306 307 5.391523 GCCGAGCAAAATGTGTTGTAATAGA 60.392 40.000 0.00 0.00 0.00 1.98
307 308 4.793216 GCCGAGCAAAATGTGTTGTAATAG 59.207 41.667 0.00 0.00 0.00 1.73
308 309 4.216472 TGCCGAGCAAAATGTGTTGTAATA 59.784 37.500 0.00 0.00 34.76 0.98
309 310 3.005261 TGCCGAGCAAAATGTGTTGTAAT 59.995 39.130 0.00 0.00 34.76 1.89
310 311 2.359214 TGCCGAGCAAAATGTGTTGTAA 59.641 40.909 0.00 0.00 34.76 2.41
311 312 1.950216 TGCCGAGCAAAATGTGTTGTA 59.050 42.857 0.00 0.00 34.76 2.41
312 313 0.743688 TGCCGAGCAAAATGTGTTGT 59.256 45.000 0.00 0.00 34.76 3.32
313 314 1.130955 GTGCCGAGCAAAATGTGTTG 58.869 50.000 0.00 0.00 41.47 3.33
314 315 0.031994 GGTGCCGAGCAAAATGTGTT 59.968 50.000 0.00 0.00 41.47 3.32
315 316 1.106351 TGGTGCCGAGCAAAATGTGT 61.106 50.000 0.00 0.00 41.47 3.72
316 317 0.387622 CTGGTGCCGAGCAAAATGTG 60.388 55.000 0.00 0.00 41.47 3.21
317 318 1.959085 CTGGTGCCGAGCAAAATGT 59.041 52.632 0.00 0.00 41.47 2.71
318 319 1.444895 GCTGGTGCCGAGCAAAATG 60.445 57.895 0.00 0.00 41.47 2.32
319 320 2.964978 GCTGGTGCCGAGCAAAAT 59.035 55.556 0.00 0.00 41.47 1.82
320 321 3.659092 CGCTGGTGCCGAGCAAAA 61.659 61.111 9.20 0.00 41.47 2.44
321 322 4.617520 TCGCTGGTGCCGAGCAAA 62.618 61.111 9.20 0.00 41.47 3.68
337 338 3.866582 CATCGCCACCCCTCCCTC 61.867 72.222 0.00 0.00 0.00 4.30
338 339 3.721172 ATCATCGCCACCCCTCCCT 62.721 63.158 0.00 0.00 0.00 4.20
339 340 3.171388 ATCATCGCCACCCCTCCC 61.171 66.667 0.00 0.00 0.00 4.30
340 341 2.111878 CATCATCGCCACCCCTCC 59.888 66.667 0.00 0.00 0.00 4.30
341 342 1.227674 GTCATCATCGCCACCCCTC 60.228 63.158 0.00 0.00 0.00 4.30
342 343 1.348008 ATGTCATCATCGCCACCCCT 61.348 55.000 0.00 0.00 0.00 4.79
343 344 1.149174 ATGTCATCATCGCCACCCC 59.851 57.895 0.00 0.00 0.00 4.95
344 345 1.789078 GCATGTCATCATCGCCACCC 61.789 60.000 0.00 0.00 31.15 4.61
345 346 1.650912 GCATGTCATCATCGCCACC 59.349 57.895 0.00 0.00 31.15 4.61
346 347 0.816825 AGGCATGTCATCATCGCCAC 60.817 55.000 12.94 0.00 43.67 5.01
347 348 0.107066 AAGGCATGTCATCATCGCCA 60.107 50.000 12.94 0.00 43.67 5.69
348 349 0.590195 GAAGGCATGTCATCATCGCC 59.410 55.000 0.00 4.12 42.67 5.54
349 350 0.234106 CGAAGGCATGTCATCATCGC 59.766 55.000 0.00 0.00 31.15 4.58
350 351 0.863799 CCGAAGGCATGTCATCATCG 59.136 55.000 0.00 4.00 46.14 3.84
364 365 1.308998 ACCACTGAAGCAAACCGAAG 58.691 50.000 0.00 0.00 0.00 3.79
365 366 1.403679 CAACCACTGAAGCAAACCGAA 59.596 47.619 0.00 0.00 0.00 4.30
366 367 1.021202 CAACCACTGAAGCAAACCGA 58.979 50.000 0.00 0.00 0.00 4.69
367 368 0.738389 ACAACCACTGAAGCAAACCG 59.262 50.000 0.00 0.00 0.00 4.44
368 369 2.287608 GCTACAACCACTGAAGCAAACC 60.288 50.000 0.00 0.00 33.38 3.27
369 370 2.287608 GGCTACAACCACTGAAGCAAAC 60.288 50.000 0.00 0.00 34.85 2.93
370 371 1.953686 GGCTACAACCACTGAAGCAAA 59.046 47.619 0.00 0.00 34.85 3.68
371 372 1.604604 GGCTACAACCACTGAAGCAA 58.395 50.000 0.00 0.00 34.85 3.91
372 373 0.602638 CGGCTACAACCACTGAAGCA 60.603 55.000 0.00 0.00 34.85 3.91
373 374 0.602905 ACGGCTACAACCACTGAAGC 60.603 55.000 0.00 0.00 0.00 3.86
374 375 1.429463 GACGGCTACAACCACTGAAG 58.571 55.000 0.00 0.00 0.00 3.02
375 376 0.319211 CGACGGCTACAACCACTGAA 60.319 55.000 0.00 0.00 0.00 3.02
376 377 1.287815 CGACGGCTACAACCACTGA 59.712 57.895 0.00 0.00 0.00 3.41
377 378 2.380410 GCGACGGCTACAACCACTG 61.380 63.158 0.00 0.00 35.83 3.66
378 379 2.048503 GCGACGGCTACAACCACT 60.049 61.111 0.00 0.00 35.83 4.00
388 389 2.478890 TAGACCAGCTAGCGACGGC 61.479 63.158 17.62 8.35 40.37 5.68
389 390 1.355916 GTAGACCAGCTAGCGACGG 59.644 63.158 16.49 16.49 0.00 4.79
390 391 0.028242 CTGTAGACCAGCTAGCGACG 59.972 60.000 9.55 3.04 33.59 5.12
391 392 1.380524 TCTGTAGACCAGCTAGCGAC 58.619 55.000 9.55 2.35 41.25 5.19
392 393 2.158740 AGATCTGTAGACCAGCTAGCGA 60.159 50.000 9.55 0.00 41.25 4.93
393 394 2.031245 CAGATCTGTAGACCAGCTAGCG 60.031 54.545 14.95 4.28 41.25 4.26
394 395 3.218453 TCAGATCTGTAGACCAGCTAGC 58.782 50.000 21.92 6.62 41.25 3.42
395 396 5.301551 ACATTCAGATCTGTAGACCAGCTAG 59.698 44.000 21.92 3.79 41.25 3.42
396 397 5.204292 ACATTCAGATCTGTAGACCAGCTA 58.796 41.667 21.92 0.00 41.25 3.32
397 398 4.029520 ACATTCAGATCTGTAGACCAGCT 58.970 43.478 21.92 0.00 41.25 4.24
398 399 4.399004 ACATTCAGATCTGTAGACCAGC 57.601 45.455 21.92 0.00 41.25 4.85
399 400 8.954950 AAATTACATTCAGATCTGTAGACCAG 57.045 34.615 21.92 9.00 42.97 4.00
400 401 9.739276 AAAAATTACATTCAGATCTGTAGACCA 57.261 29.630 21.92 4.92 0.00 4.02
424 425 9.826574 AGTACAGCGAATACCAGAAATAATAAA 57.173 29.630 0.00 0.00 0.00 1.40
427 428 9.640963 GATAGTACAGCGAATACCAGAAATAAT 57.359 33.333 0.00 0.00 0.00 1.28
428 429 8.635328 TGATAGTACAGCGAATACCAGAAATAA 58.365 33.333 0.00 0.00 0.00 1.40
429 430 8.080417 GTGATAGTACAGCGAATACCAGAAATA 58.920 37.037 0.00 0.00 0.00 1.40
430 431 6.924060 GTGATAGTACAGCGAATACCAGAAAT 59.076 38.462 0.00 0.00 0.00 2.17
431 432 6.127563 TGTGATAGTACAGCGAATACCAGAAA 60.128 38.462 0.00 0.00 0.00 2.52
432 433 5.358725 TGTGATAGTACAGCGAATACCAGAA 59.641 40.000 0.00 0.00 0.00 3.02
433 434 4.885325 TGTGATAGTACAGCGAATACCAGA 59.115 41.667 0.00 0.00 0.00 3.86
434 435 5.183014 TGTGATAGTACAGCGAATACCAG 57.817 43.478 0.00 0.00 0.00 4.00
435 436 5.585820 TTGTGATAGTACAGCGAATACCA 57.414 39.130 0.00 0.00 0.00 3.25
436 437 6.700081 TCAATTGTGATAGTACAGCGAATACC 59.300 38.462 5.13 0.00 0.00 2.73
437 438 7.694388 TCAATTGTGATAGTACAGCGAATAC 57.306 36.000 5.13 0.00 0.00 1.89
438 439 8.141268 TCATCAATTGTGATAGTACAGCGAATA 58.859 33.333 5.13 0.00 42.88 1.75
439 440 6.986231 TCATCAATTGTGATAGTACAGCGAAT 59.014 34.615 5.13 0.00 42.88 3.34
440 441 6.337356 TCATCAATTGTGATAGTACAGCGAA 58.663 36.000 5.13 0.00 42.88 4.70
441 442 5.901552 TCATCAATTGTGATAGTACAGCGA 58.098 37.500 5.13 0.00 42.88 4.93
442 443 6.421801 TCATCATCAATTGTGATAGTACAGCG 59.578 38.462 17.49 7.97 42.88 5.18
443 444 7.719778 TCATCATCAATTGTGATAGTACAGC 57.280 36.000 17.49 0.00 42.88 4.40
460 461 9.443283 CGGAAAACTTTTGATCTAATCATCATC 57.557 33.333 0.00 0.00 39.39 2.92
461 462 8.408601 CCGGAAAACTTTTGATCTAATCATCAT 58.591 33.333 0.00 0.00 39.39 2.45
462 463 7.628366 GCCGGAAAACTTTTGATCTAATCATCA 60.628 37.037 5.05 0.00 39.39 3.07
463 464 6.693113 GCCGGAAAACTTTTGATCTAATCATC 59.307 38.462 5.05 0.00 39.39 2.92
464 465 6.152661 TGCCGGAAAACTTTTGATCTAATCAT 59.847 34.615 5.05 0.00 39.39 2.45
465 466 5.475220 TGCCGGAAAACTTTTGATCTAATCA 59.525 36.000 5.05 0.00 37.55 2.57
466 467 5.949735 TGCCGGAAAACTTTTGATCTAATC 58.050 37.500 5.05 0.00 0.00 1.75
467 468 5.975693 TGCCGGAAAACTTTTGATCTAAT 57.024 34.783 5.05 0.00 0.00 1.73
468 469 5.776173 TTGCCGGAAAACTTTTGATCTAA 57.224 34.783 5.05 0.00 0.00 2.10
469 470 5.776173 TTTGCCGGAAAACTTTTGATCTA 57.224 34.783 5.05 0.00 0.00 1.98
470 471 4.664150 TTTGCCGGAAAACTTTTGATCT 57.336 36.364 5.05 0.00 0.00 2.75
471 472 5.726729 TTTTTGCCGGAAAACTTTTGATC 57.273 34.783 7.26 0.00 33.09 2.92
505 506 7.756722 GGTTTTTCTACTAGCGTACACTATGAA 59.243 37.037 0.00 0.00 0.00 2.57
507 508 6.195983 CGGTTTTTCTACTAGCGTACACTATG 59.804 42.308 0.00 0.00 0.00 2.23
518 519 4.189639 AGGTGAGCGGTTTTTCTACTAG 57.810 45.455 0.00 0.00 0.00 2.57
520 521 3.400255 GAAGGTGAGCGGTTTTTCTACT 58.600 45.455 0.00 0.00 0.00 2.57
542 543 1.202580 ACGAATATGAGAGCCACCTGC 60.203 52.381 0.00 0.00 41.71 4.85
543 544 2.898729 ACGAATATGAGAGCCACCTG 57.101 50.000 0.00 0.00 0.00 4.00
545 546 3.126831 CAGAACGAATATGAGAGCCACC 58.873 50.000 0.00 0.00 0.00 4.61
553 554 3.684305 CACTTGCACCAGAACGAATATGA 59.316 43.478 0.00 0.00 0.00 2.15
561 562 2.050985 GCGCACTTGCACCAGAAC 60.051 61.111 0.30 0.00 42.21 3.01
564 565 1.506309 TACTTGCGCACTTGCACCAG 61.506 55.000 11.12 4.42 46.25 4.00
574 575 0.456482 GCATGCATGTTACTTGCGCA 60.456 50.000 26.79 5.66 43.10 6.09
575 576 0.456482 TGCATGCATGTTACTTGCGC 60.456 50.000 26.79 14.70 43.10 6.09
588 604 0.599558 TGAAGCAGAACCTTGCATGC 59.400 50.000 11.82 11.82 46.47 4.06
643 664 4.141937 TGTGAATTTCCTAGATGTCTCCGG 60.142 45.833 0.00 0.00 0.00 5.14
644 665 5.011090 TGTGAATTTCCTAGATGTCTCCG 57.989 43.478 0.00 0.00 0.00 4.63
750 777 9.730420 GCACGTTAATTTCATTGGAACTAATAT 57.270 29.630 0.00 0.00 31.35 1.28
758 785 3.366883 GCCAGCACGTTAATTTCATTGGA 60.367 43.478 0.00 0.00 0.00 3.53
962 1037 1.128692 GTTCTCGATTTGGACAAGCGG 59.871 52.381 8.69 2.58 0.00 5.52
966 1041 2.536761 ACCGTTCTCGATTTGGACAA 57.463 45.000 0.00 0.00 39.71 3.18
967 1042 2.669113 CGTACCGTTCTCGATTTGGACA 60.669 50.000 0.00 0.00 39.71 4.02
969 1044 1.541147 ACGTACCGTTCTCGATTTGGA 59.459 47.619 0.00 0.00 36.35 3.53
983 1058 3.119029 TGCCATTGTACCTTCTACGTACC 60.119 47.826 0.00 0.00 36.13 3.34
1028 1107 0.907704 TGGAGTTATGCGGGTCACCT 60.908 55.000 0.00 0.00 33.28 4.00
1037 1116 1.670811 CATTGGTCGGTGGAGTTATGC 59.329 52.381 0.00 0.00 0.00 3.14
1038 1117 2.936498 GTCATTGGTCGGTGGAGTTATG 59.064 50.000 0.00 0.00 0.00 1.90
1056 1135 3.313007 CTTACCGGCGTCGACGTCA 62.313 63.158 37.68 19.53 45.47 4.35
1067 1146 0.104304 AGCGGCTGTTATCTTACCGG 59.896 55.000 0.00 0.00 43.99 5.28
1276 1367 4.260170 GTGAAGGAGAAGAAGATGCACAT 58.740 43.478 0.00 0.00 0.00 3.21
1714 1811 5.113383 ACGTATATTTTCGCTGGTCATTCA 58.887 37.500 0.00 0.00 0.00 2.57
1715 1812 5.652744 ACGTATATTTTCGCTGGTCATTC 57.347 39.130 0.00 0.00 0.00 2.67
1718 1817 5.252969 ACTACGTATATTTTCGCTGGTCA 57.747 39.130 0.00 0.00 0.00 4.02
1847 1946 7.167635 CACACTAAACCAGATAGCACTATAACG 59.832 40.741 0.00 0.00 0.00 3.18
1862 1961 3.563808 GTGAATCAGCACACACTAAACCA 59.436 43.478 0.00 0.00 38.63 3.67
1868 1967 1.141657 ACCAGTGAATCAGCACACACT 59.858 47.619 0.00 0.00 43.05 3.55
1976 2075 2.605601 ACCGCGACTAAAGGGGGT 60.606 61.111 8.23 0.00 44.84 4.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.