Multiple sequence alignment - TraesCS6B01G427200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G427200 chr6B 100.000 3365 0 0 1 3365 695935998 695939362 0.000000e+00 6215.0
1 TraesCS6B01G427200 chr6B 82.514 183 29 2 1067 1246 455413808 455413990 1.250000e-34 158.0
2 TraesCS6B01G427200 chr6A 87.208 2611 170 70 34 2602 604293873 604296361 0.000000e+00 2820.0
3 TraesCS6B01G427200 chr6A 87.048 2185 143 70 608 2753 604384281 604386364 0.000000e+00 2338.0
4 TraesCS6B01G427200 chr6A 82.514 183 29 2 1067 1246 430343411 430343229 1.250000e-34 158.0
5 TraesCS6B01G427200 chr6A 86.316 95 8 2 3189 3278 604386508 604386602 7.680000e-17 99.0
6 TraesCS6B01G427200 chr6A 90.667 75 3 2 3294 3364 604386652 604386726 2.760000e-16 97.1
7 TraesCS6B01G427200 chr6D 87.092 2053 140 76 608 2626 457347528 457345567 0.000000e+00 2207.0
8 TraesCS6B01G427200 chr6D 88.050 1933 109 59 692 2602 457473573 457471741 0.000000e+00 2178.0
9 TraesCS6B01G427200 chr6D 85.132 417 34 18 61 472 457474766 457474373 5.230000e-108 401.0
10 TraesCS6B01G427200 chr6D 84.810 158 21 2 1067 1221 292374747 292374904 4.500000e-34 156.0
11 TraesCS6B01G427200 chr6D 87.826 115 8 4 2645 2753 457345425 457345311 2.720000e-26 130.0
12 TraesCS6B01G427200 chr5A 86.297 1496 109 50 37 1490 531242093 531240652 0.000000e+00 1539.0
13 TraesCS6B01G427200 chr5A 75.712 737 140 24 1611 2335 454720580 454721289 1.930000e-87 333.0
14 TraesCS6B01G427200 chr5A 95.556 45 2 0 2904 2948 291792619 291792663 4.660000e-09 73.1
15 TraesCS6B01G427200 chr5A 100.000 29 0 0 3100 3128 469123001 469123029 2.000000e-03 54.7
16 TraesCS6B01G427200 chr5D 76.223 736 138 21 1611 2335 353763228 353763937 4.130000e-94 355.0
17 TraesCS6B01G427200 chr5B 75.815 736 141 22 1611 2335 417874961 417875670 4.160000e-89 339.0
18 TraesCS6B01G427200 chr1A 86.154 130 17 1 1717 1846 251376999 251377127 4.530000e-29 139.0
19 TraesCS6B01G427200 chr1D 84.507 142 18 3 1082 1221 199623999 199624138 1.630000e-28 137.0
20 TraesCS6B01G427200 chr1D 85.385 130 18 1 1717 1846 199624598 199624726 2.110000e-27 134.0
21 TraesCS6B01G427200 chr2D 87.611 113 12 2 1380 1491 462197753 462197864 2.720000e-26 130.0
22 TraesCS6B01G427200 chr2A 87.500 112 14 0 1380 1491 607476495 607476606 2.720000e-26 130.0
23 TraesCS6B01G427200 chr2B 85.841 113 14 2 1380 1491 544982032 544982143 5.900000e-23 119.0
24 TraesCS6B01G427200 chr7B 84.821 112 17 0 1380 1491 102782876 102782765 2.740000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G427200 chr6B 695935998 695939362 3364 False 6215.0 6215 100.000000 1 3365 1 chr6B.!!$F2 3364
1 TraesCS6B01G427200 chr6A 604293873 604296361 2488 False 2820.0 2820 87.208000 34 2602 1 chr6A.!!$F1 2568
2 TraesCS6B01G427200 chr6A 604384281 604386726 2445 False 844.7 2338 88.010333 608 3364 3 chr6A.!!$F2 2756
3 TraesCS6B01G427200 chr6D 457471741 457474766 3025 True 1289.5 2178 86.591000 61 2602 2 chr6D.!!$R2 2541
4 TraesCS6B01G427200 chr6D 457345311 457347528 2217 True 1168.5 2207 87.459000 608 2753 2 chr6D.!!$R1 2145
5 TraesCS6B01G427200 chr5A 531240652 531242093 1441 True 1539.0 1539 86.297000 37 1490 1 chr5A.!!$R1 1453
6 TraesCS6B01G427200 chr5A 454720580 454721289 709 False 333.0 333 75.712000 1611 2335 1 chr5A.!!$F2 724
7 TraesCS6B01G427200 chr5D 353763228 353763937 709 False 355.0 355 76.223000 1611 2335 1 chr5D.!!$F1 724
8 TraesCS6B01G427200 chr5B 417874961 417875670 709 False 339.0 339 75.815000 1611 2335 1 chr5B.!!$F1 724

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
822 1498 0.038166 TGATCCAACCAAGAGGCCAC 59.962 55.0 5.01 0.0 39.06 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2393 3128 0.320374 AATGGTCGAGGCTGAACGAA 59.68 50.0 0.0 0.0 40.12 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.404083 ACAACCACTGCCTTTGTCG 58.596 52.632 0.00 0.00 0.00 4.35
19 20 0.107410 ACAACCACTGCCTTTGTCGA 60.107 50.000 0.00 0.00 0.00 4.20
20 21 1.021202 CAACCACTGCCTTTGTCGAA 58.979 50.000 0.00 0.00 0.00 3.71
21 22 1.608590 CAACCACTGCCTTTGTCGAAT 59.391 47.619 0.00 0.00 0.00 3.34
22 23 2.811431 CAACCACTGCCTTTGTCGAATA 59.189 45.455 0.00 0.00 0.00 1.75
23 24 3.134574 ACCACTGCCTTTGTCGAATAA 57.865 42.857 0.00 0.00 0.00 1.40
24 25 3.482436 ACCACTGCCTTTGTCGAATAAA 58.518 40.909 0.00 0.00 0.00 1.40
25 26 3.886505 ACCACTGCCTTTGTCGAATAAAA 59.113 39.130 0.00 0.00 0.00 1.52
26 27 4.339814 ACCACTGCCTTTGTCGAATAAAAA 59.660 37.500 0.00 0.00 0.00 1.94
77 78 1.258982 GAATCTAGGCGTCATTGCGTG 59.741 52.381 0.00 0.00 34.38 5.34
82 83 2.106074 GGCGTCATTGCGTGGATGA 61.106 57.895 0.00 0.00 35.06 2.92
84 85 0.316442 GCGTCATTGCGTGGATGATG 60.316 55.000 10.63 10.63 41.36 3.07
139 146 2.143925 GTTGCCTTAGGTCACTGTGAC 58.856 52.381 28.29 28.29 46.23 3.67
149 156 3.197766 AGGTCACTGTGACTGAAGAAACA 59.802 43.478 32.66 0.00 46.19 2.83
150 157 4.130118 GGTCACTGTGACTGAAGAAACAT 58.870 43.478 32.66 0.00 46.19 2.71
151 158 4.024556 GGTCACTGTGACTGAAGAAACATG 60.025 45.833 32.66 0.00 46.19 3.21
152 159 4.572389 GTCACTGTGACTGAAGAAACATGT 59.428 41.667 28.73 0.00 43.73 3.21
156 163 6.258727 CACTGTGACTGAAGAAACATGTAACT 59.741 38.462 0.32 0.00 0.00 2.24
238 274 7.175293 AGAGTACTCTGTCTGAAATTCGTAAGT 59.825 37.037 24.62 0.00 38.75 2.24
239 275 7.659186 AGTACTCTGTCTGAAATTCGTAAGTT 58.341 34.615 0.00 0.00 39.48 2.66
257 293 8.932791 TCGTAAGTTCTTTGATCTTTTATCACC 58.067 33.333 0.00 0.00 39.48 4.02
258 294 8.717821 CGTAAGTTCTTTGATCTTTTATCACCA 58.282 33.333 0.00 0.00 0.00 4.17
265 301 5.054390 TGATCTTTTATCACCAAAACGCC 57.946 39.130 0.00 0.00 0.00 5.68
268 304 0.241481 TTTATCACCAAAACGCCGGC 59.759 50.000 19.07 19.07 0.00 6.13
270 306 2.749706 TATCACCAAAACGCCGGCCA 62.750 55.000 23.46 0.00 0.00 5.36
271 307 3.679738 CACCAAAACGCCGGCCAT 61.680 61.111 23.46 6.41 0.00 4.40
272 308 2.915137 ACCAAAACGCCGGCCATT 60.915 55.556 23.46 13.36 0.00 3.16
273 309 2.341911 CCAAAACGCCGGCCATTT 59.658 55.556 23.46 18.98 0.00 2.32
274 310 1.736282 CCAAAACGCCGGCCATTTC 60.736 57.895 23.46 0.00 0.00 2.17
279 315 0.893727 AACGCCGGCCATTTCTTTCT 60.894 50.000 23.46 0.00 0.00 2.52
314 358 3.440522 TCTCCAACTGATGACGAGTACTG 59.559 47.826 0.00 0.00 0.00 2.74
335 379 2.615912 GGTTGCACTAAGATCCATCTGC 59.384 50.000 0.00 0.00 37.19 4.26
341 385 2.133553 CTAAGATCCATCTGCTGTGCG 58.866 52.381 0.00 0.00 37.19 5.34
372 416 5.567623 CGGATAGATCGGAATTCATTCACCT 60.568 44.000 7.93 0.00 38.53 4.00
404 448 0.620556 AAATCGTCCCACCAGATGCT 59.379 50.000 0.00 0.00 0.00 3.79
405 449 0.620556 AATCGTCCCACCAGATGCTT 59.379 50.000 0.00 0.00 0.00 3.91
413 457 1.732259 CCACCAGATGCTTCACGTAAC 59.268 52.381 2.07 0.00 0.00 2.50
446 490 2.103538 GCGTGCTTGCATCCATGG 59.896 61.111 4.97 4.97 34.15 3.66
447 491 2.103538 CGTGCTTGCATCCATGGC 59.896 61.111 6.96 0.00 0.00 4.40
465 510 7.062322 TCCATGGCTACTGAACATTGAAATAT 58.938 34.615 6.96 0.00 0.00 1.28
466 511 7.229306 TCCATGGCTACTGAACATTGAAATATC 59.771 37.037 6.96 0.00 0.00 1.63
467 512 7.230108 CCATGGCTACTGAACATTGAAATATCT 59.770 37.037 0.00 0.00 0.00 1.98
468 513 7.792374 TGGCTACTGAACATTGAAATATCTC 57.208 36.000 0.00 0.00 0.00 2.75
482 527 7.705912 TGAAATATCTCCCTCCCTAATCAAA 57.294 36.000 0.00 0.00 0.00 2.69
510 555 4.163458 TGTTATTCGGAGGGTAAGCAGAAT 59.837 41.667 0.00 0.00 33.57 2.40
525 570 2.985139 GCAGAATTGCTCTCACAAAAGC 59.015 45.455 0.00 0.00 46.95 3.51
543 588 1.182673 GCGATTAATTGCAGCACACG 58.817 50.000 20.76 3.26 37.15 4.49
544 589 1.182673 CGATTAATTGCAGCACACGC 58.817 50.000 0.00 0.00 38.99 5.34
647 692 0.319469 GAAAATGCCCACACCAACCG 60.319 55.000 0.00 0.00 0.00 4.44
654 699 2.596338 CACACCAACCGAACCCCC 60.596 66.667 0.00 0.00 0.00 5.40
678 724 3.340928 ACCGGCAAGGAATTACTGTAAC 58.659 45.455 0.00 0.00 45.00 2.50
695 1364 5.026038 TGTAACCCACGGGACATAATTAG 57.974 43.478 9.72 0.00 38.96 1.73
705 1374 5.760253 ACGGGACATAATTAGCAGAGAATTG 59.240 40.000 0.00 0.00 0.00 2.32
744 1415 2.533318 GTGACCAGCACAGCAGTAC 58.467 57.895 0.00 0.00 46.91 2.73
745 1416 1.006220 TGACCAGCACAGCAGTACG 60.006 57.895 0.00 0.00 0.00 3.67
746 1417 1.006102 GACCAGCACAGCAGTACGT 60.006 57.895 0.00 0.00 0.00 3.57
774 1446 4.137872 CACGTCGTACCGGGCCAT 62.138 66.667 6.32 0.00 0.00 4.40
775 1447 2.440065 ACGTCGTACCGGGCCATA 60.440 61.111 6.32 0.00 0.00 2.74
776 1448 2.333938 CGTCGTACCGGGCCATAG 59.666 66.667 6.32 0.00 0.00 2.23
777 1449 2.732658 GTCGTACCGGGCCATAGG 59.267 66.667 6.32 7.42 0.00 2.57
820 1496 1.341383 ACATGATCCAACCAAGAGGCC 60.341 52.381 0.00 0.00 39.06 5.19
821 1497 1.002069 ATGATCCAACCAAGAGGCCA 58.998 50.000 5.01 0.00 39.06 5.36
822 1498 0.038166 TGATCCAACCAAGAGGCCAC 59.962 55.000 5.01 0.00 39.06 5.01
823 1499 0.329596 GATCCAACCAAGAGGCCACT 59.670 55.000 5.01 0.00 39.06 4.00
861 1537 3.515104 TCACTAGATGGATGCACAAGTGA 59.485 43.478 18.26 18.26 39.48 3.41
862 1538 3.869832 CACTAGATGGATGCACAAGTGAG 59.130 47.826 15.93 0.76 35.93 3.51
902 1586 2.128128 CGACTGCACGCAACGTTC 60.128 61.111 0.00 0.00 38.32 3.95
941 1637 2.865343 ACACGCATACACTAGCTACC 57.135 50.000 0.00 0.00 0.00 3.18
963 1659 3.058432 CACATCTCACTTTCAGTGGCAAG 60.058 47.826 4.09 0.00 45.94 4.01
1024 1720 2.046892 CCTCCTCGTGGCAAGTGG 60.047 66.667 14.23 14.23 0.00 4.00
1025 1721 2.743928 CTCCTCGTGGCAAGTGGC 60.744 66.667 15.35 0.00 43.74 5.01
1143 1842 2.152016 GGCAACAACAACTACCTCCTC 58.848 52.381 0.00 0.00 0.00 3.71
1275 1974 0.309922 GCTCGTGCATTCATGGATGG 59.690 55.000 15.95 0.00 36.03 3.51
1276 1975 1.957668 CTCGTGCATTCATGGATGGA 58.042 50.000 15.95 10.34 36.03 3.41
1277 1976 1.600957 CTCGTGCATTCATGGATGGAC 59.399 52.381 24.77 24.77 42.72 4.02
1278 1977 1.210234 TCGTGCATTCATGGATGGACT 59.790 47.619 29.40 0.00 43.60 3.85
1279 1978 2.019249 CGTGCATTCATGGATGGACTT 58.981 47.619 29.40 0.00 43.60 3.01
1280 1979 2.032550 CGTGCATTCATGGATGGACTTC 59.967 50.000 29.40 10.12 43.60 3.01
1281 1980 3.018856 GTGCATTCATGGATGGACTTCA 58.981 45.455 26.66 8.94 42.81 3.02
1291 2005 2.355209 GGATGGACTTCACTCTTCACCC 60.355 54.545 0.00 0.00 0.00 4.61
1499 2222 0.386352 TCCAGTTCGTACGTGCTTCG 60.386 55.000 16.05 7.13 46.00 3.79
1500 2223 0.386352 CCAGTTCGTACGTGCTTCGA 60.386 55.000 16.05 0.29 42.86 3.71
1501 2224 1.614385 CAGTTCGTACGTGCTTCGAT 58.386 50.000 16.05 0.00 42.86 3.59
1502 2225 1.578023 CAGTTCGTACGTGCTTCGATC 59.422 52.381 16.05 3.15 42.86 3.69
1503 2226 0.912528 GTTCGTACGTGCTTCGATCC 59.087 55.000 16.05 0.00 42.86 3.36
1504 2227 0.806868 TTCGTACGTGCTTCGATCCT 59.193 50.000 16.05 0.00 42.86 3.24
1510 2234 1.000955 ACGTGCTTCGATCCTTTCACT 59.999 47.619 8.63 0.00 42.86 3.41
1521 2245 3.634397 TCCTTTCACTGATCCATCCAC 57.366 47.619 0.00 0.00 0.00 4.02
1584 2308 8.621921 GTGTACACACTCTCTAATGAGTAATG 57.378 38.462 21.14 0.00 44.56 1.90
1585 2309 8.459635 GTGTACACACTCTCTAATGAGTAATGA 58.540 37.037 21.14 0.00 44.56 2.57
1586 2310 9.020731 TGTACACACTCTCTAATGAGTAATGAA 57.979 33.333 12.17 0.52 44.56 2.57
1831 2561 3.243771 CCCCGACTACATCAAGTACATCC 60.244 52.174 0.00 0.00 0.00 3.51
2290 3020 1.115467 CATCGCCCAGAACTACCTCT 58.885 55.000 0.00 0.00 0.00 3.69
2292 3022 1.030488 TCGCCCAGAACTACCTCTCG 61.030 60.000 0.00 0.00 0.00 4.04
2368 3098 0.739561 CCACCTCCACGACTAGCTAC 59.260 60.000 0.00 0.00 0.00 3.58
2369 3099 1.460504 CACCTCCACGACTAGCTACA 58.539 55.000 0.00 0.00 0.00 2.74
2370 3100 1.816835 CACCTCCACGACTAGCTACAA 59.183 52.381 0.00 0.00 0.00 2.41
2371 3101 2.093106 ACCTCCACGACTAGCTACAAG 58.907 52.381 0.00 0.00 0.00 3.16
2372 3102 1.202313 CCTCCACGACTAGCTACAAGC 60.202 57.143 0.00 0.00 42.84 4.01
2373 3103 1.472878 CTCCACGACTAGCTACAAGCA 59.527 52.381 1.22 0.00 45.56 3.91
2374 3104 1.201647 TCCACGACTAGCTACAAGCAC 59.798 52.381 1.22 0.00 45.56 4.40
2376 3106 2.417379 CCACGACTAGCTACAAGCACAT 60.417 50.000 1.22 0.00 45.56 3.21
2377 3107 3.254060 CACGACTAGCTACAAGCACATT 58.746 45.455 1.22 0.00 45.56 2.71
2378 3108 3.061295 CACGACTAGCTACAAGCACATTG 59.939 47.826 1.22 0.00 45.56 2.82
2379 3109 3.056821 ACGACTAGCTACAAGCACATTGA 60.057 43.478 1.22 0.00 45.56 2.57
2380 3110 4.115516 CGACTAGCTACAAGCACATTGAT 58.884 43.478 1.22 0.00 45.56 2.57
2381 3111 4.208047 CGACTAGCTACAAGCACATTGATC 59.792 45.833 1.22 0.00 45.56 2.92
2391 3126 2.956333 AGCACATTGATCCACCATGATG 59.044 45.455 0.00 0.00 0.00 3.07
2393 3128 2.956333 CACATTGATCCACCATGATGCT 59.044 45.455 0.00 0.00 0.00 3.79
2408 3154 0.737715 ATGCTTCGTTCAGCCTCGAC 60.738 55.000 2.33 0.00 39.25 4.20
2419 3165 0.674895 AGCCTCGACCATTTGCAGTC 60.675 55.000 0.00 0.00 0.00 3.51
2421 3167 0.036010 CCTCGACCATTTGCAGTCCT 60.036 55.000 0.00 0.00 0.00 3.85
2425 3171 3.941483 CTCGACCATTTGCAGTCCTATTT 59.059 43.478 0.00 0.00 0.00 1.40
2434 3180 7.330208 CCATTTGCAGTCCTATTTCTTTCTTTG 59.670 37.037 0.00 0.00 0.00 2.77
2435 3181 7.581213 TTTGCAGTCCTATTTCTTTCTTTGA 57.419 32.000 0.00 0.00 0.00 2.69
2436 3182 7.765695 TTGCAGTCCTATTTCTTTCTTTGAT 57.234 32.000 0.00 0.00 0.00 2.57
2437 3183 7.149569 TGCAGTCCTATTTCTTTCTTTGATG 57.850 36.000 0.00 0.00 0.00 3.07
2438 3184 6.032717 GCAGTCCTATTTCTTTCTTTGATGC 58.967 40.000 0.00 0.00 0.00 3.91
2444 3190 8.859090 TCCTATTTCTTTCTTTGATGCTTTTCA 58.141 29.630 0.00 0.00 0.00 2.69
2445 3191 9.649167 CCTATTTCTTTCTTTGATGCTTTTCAT 57.351 29.630 0.00 0.00 38.32 2.57
2458 3213 2.683362 GCTTTTCATATATAGCCGGCCC 59.317 50.000 26.15 0.00 0.00 5.80
2470 3225 1.512694 CCGGCCCTCTTGATTTTGC 59.487 57.895 0.00 0.00 0.00 3.68
2480 3235 5.367302 CCTCTTGATTTTGCCCAAGAAAAA 58.633 37.500 0.00 0.00 45.40 1.94
2484 3239 6.883756 TCTTGATTTTGCCCAAGAAAAAGTTT 59.116 30.769 0.00 0.00 43.84 2.66
2538 3304 0.390866 CAGCTAGTGTGTCAGGCAGG 60.391 60.000 0.00 0.00 0.00 4.85
2539 3305 0.833834 AGCTAGTGTGTCAGGCAGGT 60.834 55.000 0.00 0.00 0.00 4.00
2540 3306 0.035458 GCTAGTGTGTCAGGCAGGTT 59.965 55.000 0.00 0.00 0.00 3.50
2541 3307 1.800805 CTAGTGTGTCAGGCAGGTTG 58.199 55.000 0.00 0.00 0.00 3.77
2542 3308 1.344438 CTAGTGTGTCAGGCAGGTTGA 59.656 52.381 0.00 0.00 0.00 3.18
2543 3309 0.107456 AGTGTGTCAGGCAGGTTGAG 59.893 55.000 0.00 0.00 0.00 3.02
2544 3310 0.886490 GTGTGTCAGGCAGGTTGAGG 60.886 60.000 0.00 0.00 0.00 3.86
2545 3311 1.344953 TGTGTCAGGCAGGTTGAGGT 61.345 55.000 0.00 0.00 0.00 3.85
2546 3312 0.179018 GTGTCAGGCAGGTTGAGGTT 60.179 55.000 0.00 0.00 0.00 3.50
2571 3340 5.319140 TCTAGCTAGTTTGTAATGCGTGA 57.681 39.130 20.10 0.00 0.00 4.35
2627 3402 1.136828 TGGTTGCTTGTGAGGTACCT 58.863 50.000 16.26 16.26 0.00 3.08
2636 3411 3.399234 TGAGGTACCTCATGCCACT 57.601 52.632 35.91 1.92 46.80 4.00
2637 3412 1.656587 TGAGGTACCTCATGCCACTT 58.343 50.000 35.91 1.09 46.80 3.16
2638 3413 1.555075 TGAGGTACCTCATGCCACTTC 59.445 52.381 35.91 11.59 46.80 3.01
2640 3415 1.556911 AGGTACCTCATGCCACTTCTG 59.443 52.381 9.21 0.00 34.94 3.02
2643 3418 2.706339 ACCTCATGCCACTTCTGATC 57.294 50.000 0.00 0.00 0.00 2.92
2721 3629 6.861065 TGTTCTTGACAGGATTCAGTTTAC 57.139 37.500 0.00 0.00 33.40 2.01
2735 3643 5.738619 TCAGTTTACCTAGCTTCATGACA 57.261 39.130 0.00 0.00 0.00 3.58
2745 3653 7.620880 ACCTAGCTTCATGACACAGTAATTAA 58.379 34.615 0.00 0.00 0.00 1.40
2746 3654 8.267894 ACCTAGCTTCATGACACAGTAATTAAT 58.732 33.333 0.00 0.00 0.00 1.40
2747 3655 8.768955 CCTAGCTTCATGACACAGTAATTAATC 58.231 37.037 0.00 0.00 0.00 1.75
2748 3656 9.539825 CTAGCTTCATGACACAGTAATTAATCT 57.460 33.333 0.00 0.00 0.00 2.40
2749 3657 8.206325 AGCTTCATGACACAGTAATTAATCTG 57.794 34.615 0.00 3.27 37.65 2.90
2750 3658 6.909357 GCTTCATGACACAGTAATTAATCTGC 59.091 38.462 0.00 0.00 35.37 4.26
2751 3659 6.588348 TCATGACACAGTAATTAATCTGCG 57.412 37.500 0.00 0.00 35.37 5.18
2752 3660 6.337356 TCATGACACAGTAATTAATCTGCGA 58.663 36.000 0.00 0.00 35.37 5.10
2753 3661 6.255670 TCATGACACAGTAATTAATCTGCGAC 59.744 38.462 0.00 0.00 35.37 5.19
2754 3662 5.720202 TGACACAGTAATTAATCTGCGACT 58.280 37.500 4.49 0.00 35.37 4.18
2755 3663 5.805486 TGACACAGTAATTAATCTGCGACTC 59.195 40.000 4.49 0.00 35.37 3.36
2756 3664 5.109903 ACACAGTAATTAATCTGCGACTCC 58.890 41.667 4.49 0.00 35.37 3.85
2757 3665 5.109210 CACAGTAATTAATCTGCGACTCCA 58.891 41.667 4.49 0.00 35.37 3.86
2758 3666 5.005779 CACAGTAATTAATCTGCGACTCCAC 59.994 44.000 4.49 0.00 35.37 4.02
2759 3667 5.105310 ACAGTAATTAATCTGCGACTCCACT 60.105 40.000 4.49 0.00 35.37 4.00
2760 3668 6.096423 ACAGTAATTAATCTGCGACTCCACTA 59.904 38.462 4.49 0.00 35.37 2.74
2761 3669 6.418226 CAGTAATTAATCTGCGACTCCACTAC 59.582 42.308 0.00 0.00 0.00 2.73
2762 3670 5.339008 AATTAATCTGCGACTCCACTACA 57.661 39.130 0.00 0.00 0.00 2.74
2763 3671 4.794278 TTAATCTGCGACTCCACTACAA 57.206 40.909 0.00 0.00 0.00 2.41
2764 3672 3.678056 AATCTGCGACTCCACTACAAA 57.322 42.857 0.00 0.00 0.00 2.83
2765 3673 3.895232 ATCTGCGACTCCACTACAAAT 57.105 42.857 0.00 0.00 0.00 2.32
2766 3674 3.232213 TCTGCGACTCCACTACAAATC 57.768 47.619 0.00 0.00 0.00 2.17
2767 3675 2.826128 TCTGCGACTCCACTACAAATCT 59.174 45.455 0.00 0.00 0.00 2.40
2768 3676 2.926200 CTGCGACTCCACTACAAATCTG 59.074 50.000 0.00 0.00 0.00 2.90
2769 3677 2.560981 TGCGACTCCACTACAAATCTGA 59.439 45.455 0.00 0.00 0.00 3.27
2770 3678 2.924290 GCGACTCCACTACAAATCTGAC 59.076 50.000 0.00 0.00 0.00 3.51
2771 3679 3.172050 CGACTCCACTACAAATCTGACG 58.828 50.000 0.00 0.00 0.00 4.35
2772 3680 3.366070 CGACTCCACTACAAATCTGACGT 60.366 47.826 0.00 0.00 0.00 4.34
2773 3681 4.167268 GACTCCACTACAAATCTGACGTC 58.833 47.826 9.11 9.11 0.00 4.34
2774 3682 3.572682 ACTCCACTACAAATCTGACGTCA 59.427 43.478 18.88 18.88 0.00 4.35
2775 3683 4.038763 ACTCCACTACAAATCTGACGTCAA 59.961 41.667 20.49 11.00 0.00 3.18
2776 3684 4.951254 TCCACTACAAATCTGACGTCAAA 58.049 39.130 20.49 6.93 0.00 2.69
2777 3685 5.547465 TCCACTACAAATCTGACGTCAAAT 58.453 37.500 20.49 9.50 0.00 2.32
2778 3686 5.995282 TCCACTACAAATCTGACGTCAAATT 59.005 36.000 20.49 15.79 0.00 1.82
2779 3687 6.485313 TCCACTACAAATCTGACGTCAAATTT 59.515 34.615 21.30 21.30 0.00 1.82
2780 3688 7.012894 TCCACTACAAATCTGACGTCAAATTTT 59.987 33.333 23.75 17.33 0.00 1.82
2781 3689 7.647715 CCACTACAAATCTGACGTCAAATTTTT 59.352 33.333 23.75 20.39 0.00 1.94
2810 3718 8.934825 ACCATGGAAAATCAAATATTTTTCGTG 58.065 29.630 21.47 13.34 40.89 4.35
2812 3720 7.357951 TGGAAAATCAAATATTTTTCGTGGC 57.642 32.000 0.00 0.00 40.89 5.01
2813 3721 6.931281 TGGAAAATCAAATATTTTTCGTGGCA 59.069 30.769 0.00 0.00 40.89 4.92
2814 3722 7.442364 TGGAAAATCAAATATTTTTCGTGGCAA 59.558 29.630 0.00 0.00 40.89 4.52
2815 3723 8.286097 GGAAAATCAAATATTTTTCGTGGCAAA 58.714 29.630 0.00 0.00 40.89 3.68
2816 3724 9.824534 GAAAATCAAATATTTTTCGTGGCAAAT 57.175 25.926 0.00 0.00 33.59 2.32
2825 3733 9.959749 ATATTTTTCGTGGCAAATTATATTCGT 57.040 25.926 0.00 0.00 0.00 3.85
2826 3734 7.728580 TTTTTCGTGGCAAATTATATTCGTC 57.271 32.000 0.00 0.00 0.00 4.20
2827 3735 4.702247 TCGTGGCAAATTATATTCGTCG 57.298 40.909 0.00 0.00 0.00 5.12
2828 3736 4.114073 TCGTGGCAAATTATATTCGTCGT 58.886 39.130 0.00 0.00 0.00 4.34
2829 3737 4.026393 TCGTGGCAAATTATATTCGTCGTG 60.026 41.667 0.00 0.00 0.00 4.35
2830 3738 4.523813 GTGGCAAATTATATTCGTCGTGG 58.476 43.478 0.00 0.00 0.00 4.94
2831 3739 4.271533 GTGGCAAATTATATTCGTCGTGGA 59.728 41.667 0.00 0.00 0.00 4.02
2832 3740 5.049680 GTGGCAAATTATATTCGTCGTGGAT 60.050 40.000 0.00 0.00 0.00 3.41
2833 3741 5.049749 TGGCAAATTATATTCGTCGTGGATG 60.050 40.000 0.00 0.00 0.00 3.51
2834 3742 5.382303 GCAAATTATATTCGTCGTGGATGG 58.618 41.667 0.00 0.00 0.00 3.51
2835 3743 5.049680 GCAAATTATATTCGTCGTGGATGGT 60.050 40.000 0.00 0.00 0.00 3.55
2836 3744 6.146510 GCAAATTATATTCGTCGTGGATGGTA 59.853 38.462 0.00 0.00 0.00 3.25
2837 3745 7.307514 GCAAATTATATTCGTCGTGGATGGTAA 60.308 37.037 0.00 0.00 0.00 2.85
2838 3746 8.552865 CAAATTATATTCGTCGTGGATGGTAAA 58.447 33.333 0.00 0.00 0.00 2.01
2839 3747 8.842358 AATTATATTCGTCGTGGATGGTAAAT 57.158 30.769 0.00 0.00 0.00 1.40
2840 3748 8.842358 ATTATATTCGTCGTGGATGGTAAATT 57.158 30.769 0.00 0.00 0.00 1.82
2841 3749 8.665643 TTATATTCGTCGTGGATGGTAAATTT 57.334 30.769 0.00 0.00 0.00 1.82
2842 3750 9.761504 TTATATTCGTCGTGGATGGTAAATTTA 57.238 29.630 0.00 0.00 0.00 1.40
2843 3751 6.598753 ATTCGTCGTGGATGGTAAATTTAG 57.401 37.500 0.00 0.00 0.00 1.85
2844 3752 5.075858 TCGTCGTGGATGGTAAATTTAGT 57.924 39.130 0.00 0.00 0.00 2.24
2845 3753 5.481105 TCGTCGTGGATGGTAAATTTAGTT 58.519 37.500 0.00 0.00 0.00 2.24
2846 3754 5.933463 TCGTCGTGGATGGTAAATTTAGTTT 59.067 36.000 0.00 0.00 0.00 2.66
2847 3755 6.019152 CGTCGTGGATGGTAAATTTAGTTTG 58.981 40.000 0.00 0.00 0.00 2.93
2848 3756 5.798434 GTCGTGGATGGTAAATTTAGTTTGC 59.202 40.000 0.00 0.00 0.00 3.68
2849 3757 4.791163 CGTGGATGGTAAATTTAGTTTGCG 59.209 41.667 0.00 0.00 33.73 4.85
2850 3758 5.391097 CGTGGATGGTAAATTTAGTTTGCGA 60.391 40.000 0.00 0.00 33.73 5.10
2851 3759 6.027749 GTGGATGGTAAATTTAGTTTGCGAG 58.972 40.000 0.00 0.00 33.73 5.03
2852 3760 5.941058 TGGATGGTAAATTTAGTTTGCGAGA 59.059 36.000 0.00 0.00 33.73 4.04
2853 3761 6.431543 TGGATGGTAAATTTAGTTTGCGAGAA 59.568 34.615 0.00 0.00 33.73 2.87
2854 3762 7.122055 TGGATGGTAAATTTAGTTTGCGAGAAT 59.878 33.333 0.00 0.00 33.73 2.40
2855 3763 7.432252 GGATGGTAAATTTAGTTTGCGAGAATG 59.568 37.037 0.00 0.00 33.73 2.67
2856 3764 7.209471 TGGTAAATTTAGTTTGCGAGAATGT 57.791 32.000 0.00 0.00 33.73 2.71
2857 3765 7.302524 TGGTAAATTTAGTTTGCGAGAATGTC 58.697 34.615 0.00 0.00 33.73 3.06
2858 3766 7.041030 TGGTAAATTTAGTTTGCGAGAATGTCA 60.041 33.333 0.00 0.00 33.73 3.58
2859 3767 7.806014 GGTAAATTTAGTTTGCGAGAATGTCAA 59.194 33.333 0.00 0.00 33.73 3.18
2860 3768 9.176181 GTAAATTTAGTTTGCGAGAATGTCAAA 57.824 29.630 0.00 0.00 0.00 2.69
2861 3769 8.816640 AAATTTAGTTTGCGAGAATGTCAAAT 57.183 26.923 0.00 0.00 33.08 2.32
2862 3770 8.452989 AATTTAGTTTGCGAGAATGTCAAATC 57.547 30.769 0.00 0.00 33.08 2.17
2863 3771 6.801539 TTAGTTTGCGAGAATGTCAAATCT 57.198 33.333 0.00 0.00 33.08 2.40
2864 3772 5.039480 AGTTTGCGAGAATGTCAAATCTG 57.961 39.130 0.00 0.00 33.08 2.90
2865 3773 3.476295 TTGCGAGAATGTCAAATCTGC 57.524 42.857 0.00 2.78 0.00 4.26
2866 3774 1.739466 TGCGAGAATGTCAAATCTGCC 59.261 47.619 0.00 0.00 0.00 4.85
2867 3775 2.012673 GCGAGAATGTCAAATCTGCCT 58.987 47.619 0.00 0.00 0.00 4.75
2868 3776 2.421424 GCGAGAATGTCAAATCTGCCTT 59.579 45.455 0.00 0.00 0.00 4.35
2869 3777 3.623060 GCGAGAATGTCAAATCTGCCTTA 59.377 43.478 0.00 0.00 0.00 2.69
2870 3778 4.274459 GCGAGAATGTCAAATCTGCCTTAT 59.726 41.667 0.00 0.00 0.00 1.73
2871 3779 5.220931 GCGAGAATGTCAAATCTGCCTTATT 60.221 40.000 0.00 0.00 0.00 1.40
2872 3780 6.678900 GCGAGAATGTCAAATCTGCCTTATTT 60.679 38.462 0.00 0.00 0.00 1.40
2873 3781 7.253422 CGAGAATGTCAAATCTGCCTTATTTT 58.747 34.615 0.00 0.00 0.00 1.82
2874 3782 8.397906 CGAGAATGTCAAATCTGCCTTATTTTA 58.602 33.333 0.00 0.00 0.00 1.52
2916 3824 5.954335 ACTGTGCCTACAATCTAAATTTGC 58.046 37.500 0.00 0.00 36.14 3.68
2917 3825 5.105756 ACTGTGCCTACAATCTAAATTTGCC 60.106 40.000 0.00 0.00 36.14 4.52
2918 3826 4.769488 TGTGCCTACAATCTAAATTTGCCA 59.231 37.500 0.00 0.00 32.88 4.92
2919 3827 5.421693 TGTGCCTACAATCTAAATTTGCCAT 59.578 36.000 0.00 0.00 32.88 4.40
2920 3828 5.979517 GTGCCTACAATCTAAATTTGCCATC 59.020 40.000 0.00 0.00 0.00 3.51
2921 3829 5.655974 TGCCTACAATCTAAATTTGCCATCA 59.344 36.000 0.00 0.00 0.00 3.07
2922 3830 6.324512 TGCCTACAATCTAAATTTGCCATCAT 59.675 34.615 0.00 0.00 0.00 2.45
2923 3831 6.865205 GCCTACAATCTAAATTTGCCATCATC 59.135 38.462 0.00 0.00 0.00 2.92
2924 3832 7.470424 GCCTACAATCTAAATTTGCCATCATCA 60.470 37.037 0.00 0.00 0.00 3.07
2925 3833 8.582437 CCTACAATCTAAATTTGCCATCATCAT 58.418 33.333 0.00 0.00 0.00 2.45
2926 3834 9.406828 CTACAATCTAAATTTGCCATCATCATG 57.593 33.333 0.00 0.00 0.00 3.07
2927 3835 6.704493 ACAATCTAAATTTGCCATCATCATGC 59.296 34.615 0.00 0.00 0.00 4.06
2928 3836 5.204409 TCTAAATTTGCCATCATCATGCC 57.796 39.130 0.00 0.00 0.00 4.40
2929 3837 3.916359 AAATTTGCCATCATCATGCCA 57.084 38.095 0.00 0.00 0.00 4.92
2930 3838 3.916359 AATTTGCCATCATCATGCCAA 57.084 38.095 0.00 0.00 0.00 4.52
2931 3839 4.431416 AATTTGCCATCATCATGCCAAT 57.569 36.364 0.00 0.00 27.87 3.16
2932 3840 5.554437 AATTTGCCATCATCATGCCAATA 57.446 34.783 0.00 0.00 27.87 1.90
2933 3841 5.755409 ATTTGCCATCATCATGCCAATAT 57.245 34.783 0.00 0.00 27.87 1.28
2934 3842 6.860790 ATTTGCCATCATCATGCCAATATA 57.139 33.333 0.00 0.00 27.87 0.86
2935 3843 6.667558 TTTGCCATCATCATGCCAATATAA 57.332 33.333 0.00 0.00 27.87 0.98
2936 3844 6.667558 TTGCCATCATCATGCCAATATAAA 57.332 33.333 0.00 0.00 0.00 1.40
2937 3845 6.860790 TGCCATCATCATGCCAATATAAAT 57.139 33.333 0.00 0.00 0.00 1.40
2938 3846 6.869695 TGCCATCATCATGCCAATATAAATC 58.130 36.000 0.00 0.00 0.00 2.17
2939 3847 5.975344 GCCATCATCATGCCAATATAAATCG 59.025 40.000 0.00 0.00 0.00 3.34
2940 3848 5.975344 CCATCATCATGCCAATATAAATCGC 59.025 40.000 0.00 0.00 0.00 4.58
2941 3849 5.565592 TCATCATGCCAATATAAATCGCC 57.434 39.130 0.00 0.00 0.00 5.54
2942 3850 5.008980 TCATCATGCCAATATAAATCGCCA 58.991 37.500 0.00 0.00 0.00 5.69
2943 3851 5.653330 TCATCATGCCAATATAAATCGCCAT 59.347 36.000 0.00 0.00 0.00 4.40
2944 3852 5.313520 TCATGCCAATATAAATCGCCATG 57.686 39.130 0.00 0.00 0.00 3.66
2945 3853 5.008980 TCATGCCAATATAAATCGCCATGA 58.991 37.500 0.00 0.00 0.00 3.07
2946 3854 5.476254 TCATGCCAATATAAATCGCCATGAA 59.524 36.000 0.00 0.00 0.00 2.57
2947 3855 5.781210 TGCCAATATAAATCGCCATGAAA 57.219 34.783 0.00 0.00 0.00 2.69
2948 3856 6.154203 TGCCAATATAAATCGCCATGAAAA 57.846 33.333 0.00 0.00 0.00 2.29
2949 3857 6.577103 TGCCAATATAAATCGCCATGAAAAA 58.423 32.000 0.00 0.00 0.00 1.94
2950 3858 6.700960 TGCCAATATAAATCGCCATGAAAAAG 59.299 34.615 0.00 0.00 0.00 2.27
2951 3859 6.701400 GCCAATATAAATCGCCATGAAAAAGT 59.299 34.615 0.00 0.00 0.00 2.66
2952 3860 7.224557 GCCAATATAAATCGCCATGAAAAAGTT 59.775 33.333 0.00 0.00 0.00 2.66
2953 3861 9.743057 CCAATATAAATCGCCATGAAAAAGTTA 57.257 29.630 0.00 0.00 0.00 2.24
2957 3865 6.575162 AAATCGCCATGAAAAAGTTAGACT 57.425 33.333 0.00 0.00 0.00 3.24
2958 3866 6.575162 AATCGCCATGAAAAAGTTAGACTT 57.425 33.333 0.00 0.00 40.80 3.01
2959 3867 5.356882 TCGCCATGAAAAAGTTAGACTTG 57.643 39.130 0.00 0.00 38.66 3.16
2960 3868 3.914364 CGCCATGAAAAAGTTAGACTTGC 59.086 43.478 0.00 0.00 38.66 4.01
2961 3869 4.237724 GCCATGAAAAAGTTAGACTTGCC 58.762 43.478 0.00 0.00 38.66 4.52
2962 3870 4.261994 GCCATGAAAAAGTTAGACTTGCCA 60.262 41.667 0.00 0.00 38.66 4.92
2963 3871 5.567423 GCCATGAAAAAGTTAGACTTGCCAT 60.567 40.000 0.00 0.00 38.66 4.40
2964 3872 5.865552 CCATGAAAAAGTTAGACTTGCCATG 59.134 40.000 15.59 15.59 38.66 3.66
2965 3873 6.449698 CATGAAAAAGTTAGACTTGCCATGT 58.550 36.000 14.93 0.00 38.66 3.21
2966 3874 6.072112 TGAAAAAGTTAGACTTGCCATGTC 57.928 37.500 2.65 2.65 38.66 3.06
2967 3875 5.827797 TGAAAAAGTTAGACTTGCCATGTCT 59.172 36.000 16.36 16.36 45.48 3.41
2968 3876 5.695851 AAAAGTTAGACTTGCCATGTCTG 57.304 39.130 20.14 0.00 43.66 3.51
2969 3877 3.340814 AGTTAGACTTGCCATGTCTGG 57.659 47.619 20.14 0.00 43.66 3.86
2970 3878 2.906389 AGTTAGACTTGCCATGTCTGGA 59.094 45.455 20.14 8.49 46.37 3.86
2971 3879 3.327757 AGTTAGACTTGCCATGTCTGGAA 59.672 43.478 20.14 7.48 46.37 3.53
2972 3880 2.957402 AGACTTGCCATGTCTGGAAA 57.043 45.000 12.02 0.00 46.37 3.13
2973 3881 3.446442 AGACTTGCCATGTCTGGAAAT 57.554 42.857 12.02 0.00 46.37 2.17
2974 3882 3.350833 AGACTTGCCATGTCTGGAAATC 58.649 45.455 12.02 0.00 46.37 2.17
2975 3883 3.009916 AGACTTGCCATGTCTGGAAATCT 59.990 43.478 12.02 0.00 46.37 2.40
2976 3884 3.087031 ACTTGCCATGTCTGGAAATCTG 58.913 45.455 0.00 0.00 46.37 2.90
2977 3885 2.133281 TGCCATGTCTGGAAATCTGG 57.867 50.000 0.00 0.00 46.37 3.86
2978 3886 0.743097 GCCATGTCTGGAAATCTGGC 59.257 55.000 0.00 0.00 46.37 4.85
2979 3887 1.019673 CCATGTCTGGAAATCTGGCG 58.980 55.000 0.00 0.00 46.37 5.69
2980 3888 1.679944 CCATGTCTGGAAATCTGGCGT 60.680 52.381 0.00 0.00 46.37 5.68
2981 3889 2.086869 CATGTCTGGAAATCTGGCGTT 58.913 47.619 0.00 0.00 0.00 4.84
2982 3890 3.270027 CATGTCTGGAAATCTGGCGTTA 58.730 45.455 0.00 0.00 0.00 3.18
2983 3891 2.972625 TGTCTGGAAATCTGGCGTTAG 58.027 47.619 0.00 0.00 0.00 2.34
2984 3892 2.565391 TGTCTGGAAATCTGGCGTTAGA 59.435 45.455 0.00 0.00 0.00 2.10
2985 3893 3.197766 TGTCTGGAAATCTGGCGTTAGAT 59.802 43.478 0.00 0.00 39.03 1.98
2986 3894 4.192317 GTCTGGAAATCTGGCGTTAGATT 58.808 43.478 9.54 9.54 46.50 2.40
2995 3903 7.448748 AATCTGGCGTTAGATTTTTAGTGTT 57.551 32.000 9.54 0.00 43.08 3.32
2996 3904 6.870971 TCTGGCGTTAGATTTTTAGTGTTT 57.129 33.333 0.00 0.00 0.00 2.83
2997 3905 7.266922 TCTGGCGTTAGATTTTTAGTGTTTT 57.733 32.000 0.00 0.00 0.00 2.43
2998 3906 7.357303 TCTGGCGTTAGATTTTTAGTGTTTTC 58.643 34.615 0.00 0.00 0.00 2.29
2999 3907 6.137415 TGGCGTTAGATTTTTAGTGTTTTCG 58.863 36.000 0.00 0.00 0.00 3.46
3000 3908 6.138088 GGCGTTAGATTTTTAGTGTTTTCGT 58.862 36.000 0.00 0.00 0.00 3.85
3001 3909 6.634035 GGCGTTAGATTTTTAGTGTTTTCGTT 59.366 34.615 0.00 0.00 0.00 3.85
3002 3910 7.166307 GGCGTTAGATTTTTAGTGTTTTCGTTT 59.834 33.333 0.00 0.00 0.00 3.60
3023 3931 7.443272 TCGTTTATCTGACAAGATATAGACGGA 59.557 37.037 17.25 0.00 43.42 4.69
3025 3933 5.614923 ATCTGACAAGATATAGACGGACG 57.385 43.478 0.00 0.00 41.57 4.79
3053 3970 3.187842 GGTACAACCGGAACAAAGTCATC 59.812 47.826 9.46 0.00 0.00 2.92
3055 3972 3.139077 ACAACCGGAACAAAGTCATCTC 58.861 45.455 9.46 0.00 0.00 2.75
3056 3973 3.181454 ACAACCGGAACAAAGTCATCTCT 60.181 43.478 9.46 0.00 0.00 3.10
3057 3974 3.045601 ACCGGAACAAAGTCATCTCTG 57.954 47.619 9.46 0.00 0.00 3.35
3058 3975 1.734465 CCGGAACAAAGTCATCTCTGC 59.266 52.381 0.00 0.00 0.00 4.26
3060 3977 2.807967 CGGAACAAAGTCATCTCTGCAA 59.192 45.455 0.00 0.00 0.00 4.08
3061 3978 3.120408 CGGAACAAAGTCATCTCTGCAAG 60.120 47.826 0.00 0.00 0.00 4.01
3062 3979 3.817647 GGAACAAAGTCATCTCTGCAAGT 59.182 43.478 0.00 0.00 33.76 3.16
3063 3980 4.083590 GGAACAAAGTCATCTCTGCAAGTC 60.084 45.833 0.00 0.00 33.76 3.01
3064 3981 3.062763 ACAAAGTCATCTCTGCAAGTCG 58.937 45.455 0.00 0.00 33.76 4.18
3065 3982 1.719600 AAGTCATCTCTGCAAGTCGC 58.280 50.000 0.00 0.00 42.89 5.19
3066 3983 0.457509 AGTCATCTCTGCAAGTCGCG 60.458 55.000 0.00 0.00 46.97 5.87
3067 3984 0.456824 GTCATCTCTGCAAGTCGCGA 60.457 55.000 3.71 3.71 46.97 5.87
3068 3985 0.179153 TCATCTCTGCAAGTCGCGAG 60.179 55.000 10.24 0.00 46.97 5.03
3069 3986 1.518133 ATCTCTGCAAGTCGCGAGC 60.518 57.895 10.24 11.02 46.97 5.03
3070 3987 1.943116 ATCTCTGCAAGTCGCGAGCT 61.943 55.000 10.24 7.28 46.97 4.09
3071 3988 1.137614 CTCTGCAAGTCGCGAGCTA 59.862 57.895 10.24 1.61 46.97 3.32
3072 3989 0.865218 CTCTGCAAGTCGCGAGCTAG 60.865 60.000 10.24 10.12 46.97 3.42
3073 3990 1.137614 CTGCAAGTCGCGAGCTAGA 59.862 57.895 10.24 0.00 46.97 2.43
3074 3991 0.248825 CTGCAAGTCGCGAGCTAGAT 60.249 55.000 10.24 0.00 46.97 1.98
3075 3992 0.248661 TGCAAGTCGCGAGCTAGATC 60.249 55.000 10.24 0.00 46.97 2.75
3076 3993 0.030101 GCAAGTCGCGAGCTAGATCT 59.970 55.000 10.24 0.00 0.00 2.75
3077 3994 1.752753 CAAGTCGCGAGCTAGATCTG 58.247 55.000 10.24 1.14 0.00 2.90
3078 3995 1.064803 CAAGTCGCGAGCTAGATCTGT 59.935 52.381 10.24 0.00 0.00 3.41
3079 3996 0.660488 AGTCGCGAGCTAGATCTGTG 59.340 55.000 10.24 6.73 0.00 3.66
3080 3997 0.378962 GTCGCGAGCTAGATCTGTGT 59.621 55.000 10.24 0.00 0.00 3.72
3081 3998 0.378610 TCGCGAGCTAGATCTGTGTG 59.621 55.000 3.71 0.00 0.00 3.82
3082 3999 0.378610 CGCGAGCTAGATCTGTGTGA 59.621 55.000 0.00 0.00 0.00 3.58
3083 4000 1.202188 CGCGAGCTAGATCTGTGTGAA 60.202 52.381 0.00 0.00 0.00 3.18
3084 4001 2.458951 GCGAGCTAGATCTGTGTGAAG 58.541 52.381 5.18 0.00 0.00 3.02
3085 4002 2.098280 GCGAGCTAGATCTGTGTGAAGA 59.902 50.000 5.18 0.00 0.00 2.87
3086 4003 3.243367 GCGAGCTAGATCTGTGTGAAGAT 60.243 47.826 5.18 0.00 39.66 2.40
3087 4004 4.289342 CGAGCTAGATCTGTGTGAAGATG 58.711 47.826 5.18 0.00 37.03 2.90
3088 4005 4.036144 CGAGCTAGATCTGTGTGAAGATGA 59.964 45.833 5.18 0.00 37.03 2.92
3089 4006 5.518848 AGCTAGATCTGTGTGAAGATGAG 57.481 43.478 5.18 0.00 37.03 2.90
3090 4007 4.955450 AGCTAGATCTGTGTGAAGATGAGT 59.045 41.667 5.18 0.00 37.03 3.41
3091 4008 5.042593 GCTAGATCTGTGTGAAGATGAGTG 58.957 45.833 5.18 0.00 37.03 3.51
3092 4009 5.163571 GCTAGATCTGTGTGAAGATGAGTGA 60.164 44.000 5.18 0.00 37.03 3.41
3093 4010 5.070770 AGATCTGTGTGAAGATGAGTGAC 57.929 43.478 0.00 0.00 37.03 3.67
3094 4011 4.771577 AGATCTGTGTGAAGATGAGTGACT 59.228 41.667 0.00 0.00 37.03 3.41
3095 4012 4.944619 TCTGTGTGAAGATGAGTGACTT 57.055 40.909 0.00 0.00 0.00 3.01
3096 4013 5.282055 TCTGTGTGAAGATGAGTGACTTT 57.718 39.130 0.00 0.00 0.00 2.66
3097 4014 5.052481 TCTGTGTGAAGATGAGTGACTTTG 58.948 41.667 0.00 0.00 0.00 2.77
3098 4015 4.769688 TGTGTGAAGATGAGTGACTTTGT 58.230 39.130 0.00 0.00 0.00 2.83
3099 4016 5.185454 TGTGTGAAGATGAGTGACTTTGTT 58.815 37.500 0.00 0.00 0.00 2.83
3100 4017 5.294306 TGTGTGAAGATGAGTGACTTTGTTC 59.706 40.000 0.00 0.00 0.00 3.18
3101 4018 4.816385 TGTGAAGATGAGTGACTTTGTTCC 59.184 41.667 0.00 0.00 0.00 3.62
3102 4019 4.816385 GTGAAGATGAGTGACTTTGTTCCA 59.184 41.667 0.00 0.00 0.00 3.53
3103 4020 5.471456 GTGAAGATGAGTGACTTTGTTCCAT 59.529 40.000 0.00 0.00 0.00 3.41
3104 4021 5.471116 TGAAGATGAGTGACTTTGTTCCATG 59.529 40.000 0.00 0.00 0.00 3.66
3105 4022 5.233083 AGATGAGTGACTTTGTTCCATGA 57.767 39.130 0.00 0.00 0.00 3.07
3106 4023 5.624159 AGATGAGTGACTTTGTTCCATGAA 58.376 37.500 0.00 0.00 0.00 2.57
3107 4024 5.471456 AGATGAGTGACTTTGTTCCATGAAC 59.529 40.000 0.00 0.07 42.26 3.18
3108 4025 3.882888 TGAGTGACTTTGTTCCATGAACC 59.117 43.478 0.00 0.00 41.35 3.62
3109 4026 4.137543 GAGTGACTTTGTTCCATGAACCT 58.862 43.478 0.00 0.00 41.35 3.50
3110 4027 3.885297 AGTGACTTTGTTCCATGAACCTG 59.115 43.478 0.00 0.00 41.35 4.00
3111 4028 3.632145 GTGACTTTGTTCCATGAACCTGT 59.368 43.478 0.00 1.54 41.35 4.00
3112 4029 3.631686 TGACTTTGTTCCATGAACCTGTG 59.368 43.478 0.00 0.00 41.35 3.66
3113 4030 2.362077 ACTTTGTTCCATGAACCTGTGC 59.638 45.455 0.00 0.00 41.35 4.57
3114 4031 2.064434 TTGTTCCATGAACCTGTGCA 57.936 45.000 0.00 0.00 41.35 4.57
3115 4032 2.064434 TGTTCCATGAACCTGTGCAA 57.936 45.000 0.00 0.00 41.35 4.08
3116 4033 2.596346 TGTTCCATGAACCTGTGCAAT 58.404 42.857 0.00 0.00 41.35 3.56
3117 4034 2.964464 TGTTCCATGAACCTGTGCAATT 59.036 40.909 0.00 0.00 41.35 2.32
3118 4035 3.387374 TGTTCCATGAACCTGTGCAATTT 59.613 39.130 0.00 0.00 41.35 1.82
3119 4036 4.586421 TGTTCCATGAACCTGTGCAATTTA 59.414 37.500 0.00 0.00 41.35 1.40
3120 4037 4.782019 TCCATGAACCTGTGCAATTTAC 57.218 40.909 0.00 0.00 0.00 2.01
3121 4038 4.406456 TCCATGAACCTGTGCAATTTACT 58.594 39.130 0.00 0.00 0.00 2.24
3122 4039 5.565509 TCCATGAACCTGTGCAATTTACTA 58.434 37.500 0.00 0.00 0.00 1.82
3123 4040 5.414454 TCCATGAACCTGTGCAATTTACTAC 59.586 40.000 0.00 0.00 0.00 2.73
3124 4041 5.415701 CCATGAACCTGTGCAATTTACTACT 59.584 40.000 0.00 0.00 0.00 2.57
3125 4042 5.940192 TGAACCTGTGCAATTTACTACTG 57.060 39.130 0.00 0.00 0.00 2.74
3126 4043 5.616270 TGAACCTGTGCAATTTACTACTGA 58.384 37.500 0.00 0.00 0.00 3.41
3127 4044 6.237901 TGAACCTGTGCAATTTACTACTGAT 58.762 36.000 0.00 0.00 0.00 2.90
3128 4045 6.371548 TGAACCTGTGCAATTTACTACTGATC 59.628 38.462 0.00 0.00 0.00 2.92
3129 4046 6.054860 ACCTGTGCAATTTACTACTGATCT 57.945 37.500 0.00 0.00 0.00 2.75
3130 4047 5.877012 ACCTGTGCAATTTACTACTGATCTG 59.123 40.000 0.00 0.00 0.00 2.90
3131 4048 5.877012 CCTGTGCAATTTACTACTGATCTGT 59.123 40.000 10.33 10.33 0.00 3.41
3132 4049 6.183360 CCTGTGCAATTTACTACTGATCTGTG 60.183 42.308 14.91 7.80 0.00 3.66
3133 4050 6.230472 TGTGCAATTTACTACTGATCTGTGT 58.770 36.000 14.91 12.48 0.00 3.72
3136 4053 6.934083 TGCAATTTACTACTGATCTGTGTGAA 59.066 34.615 14.91 12.85 0.00 3.18
3152 4069 0.106868 TGAAGATCAGGCTGGCATGG 60.107 55.000 15.73 0.00 0.00 3.66
3164 4081 3.813724 GCATGGGCCAGGGCTACT 61.814 66.667 21.12 0.00 41.60 2.57
3169 4086 2.150051 GGGCCAGGGCTACTGCTAT 61.150 63.158 13.81 0.00 46.14 2.97
3170 4087 0.836400 GGGCCAGGGCTACTGCTATA 60.836 60.000 13.81 0.00 46.14 1.31
3171 4088 0.321996 GGCCAGGGCTACTGCTATAC 59.678 60.000 10.60 0.00 46.14 1.47
3172 4089 1.343069 GCCAGGGCTACTGCTATACT 58.657 55.000 2.30 0.00 46.14 2.12
3175 4092 3.323979 GCCAGGGCTACTGCTATACTTAA 59.676 47.826 2.30 0.00 46.14 1.85
3177 4094 5.513267 GCCAGGGCTACTGCTATACTTAATT 60.513 44.000 2.30 0.00 46.14 1.40
3178 4095 6.166982 CCAGGGCTACTGCTATACTTAATTC 58.833 44.000 3.80 0.00 46.14 2.17
3179 4096 5.864474 CAGGGCTACTGCTATACTTAATTCG 59.136 44.000 0.00 0.00 40.97 3.34
3180 4097 5.539193 AGGGCTACTGCTATACTTAATTCGT 59.461 40.000 0.00 0.00 39.59 3.85
3182 4099 7.232127 AGGGCTACTGCTATACTTAATTCGTAA 59.768 37.037 0.00 0.00 39.59 3.18
3183 4100 7.869429 GGGCTACTGCTATACTTAATTCGTAAA 59.131 37.037 0.00 0.00 39.59 2.01
3184 4101 8.697960 GGCTACTGCTATACTTAATTCGTAAAC 58.302 37.037 0.00 0.00 39.59 2.01
3185 4102 9.460906 GCTACTGCTATACTTAATTCGTAAACT 57.539 33.333 0.00 0.00 36.03 2.66
3202 4149 7.723270 TCGTAAACTAAATTCGTAAACAGAGC 58.277 34.615 0.00 0.00 0.00 4.09
3247 4198 2.431454 CGATCGGATGGGTCCCACA 61.431 63.158 14.57 0.00 41.83 4.17
3251 4202 0.254747 TCGGATGGGTCCCACATTTC 59.745 55.000 14.57 6.73 41.83 2.17
3256 4207 2.785357 TGGGTCCCACATTTCCTTTT 57.215 45.000 6.47 0.00 0.00 2.27
3266 4217 5.294060 CCCACATTTCCTTTTGACAACTTTG 59.706 40.000 0.00 0.00 0.00 2.77
3275 4226 5.010012 CCTTTTGACAACTTTGGCTACTCAT 59.990 40.000 0.00 0.00 37.03 2.90
3276 4227 5.689383 TTTGACAACTTTGGCTACTCATC 57.311 39.130 0.00 0.00 37.03 2.92
3277 4228 4.350368 TGACAACTTTGGCTACTCATCA 57.650 40.909 0.00 0.00 37.03 3.07
3279 4230 4.515191 TGACAACTTTGGCTACTCATCAAC 59.485 41.667 0.00 0.00 37.03 3.18
3282 4233 4.098914 ACTTTGGCTACTCATCAACCAA 57.901 40.909 0.00 0.00 38.58 3.67
3283 4234 4.469657 ACTTTGGCTACTCATCAACCAAA 58.530 39.130 5.49 5.49 45.55 3.28
3284 4235 4.892934 ACTTTGGCTACTCATCAACCAAAA 59.107 37.500 6.92 0.00 46.59 2.44
3285 4236 4.846779 TTGGCTACTCATCAACCAAAAC 57.153 40.909 0.00 0.00 37.45 2.43
3286 4237 2.811431 TGGCTACTCATCAACCAAAACG 59.189 45.455 0.00 0.00 0.00 3.60
3287 4238 2.161609 GGCTACTCATCAACCAAAACGG 59.838 50.000 0.00 0.00 42.50 4.44
3288 4239 2.414161 GCTACTCATCAACCAAAACGGC 60.414 50.000 0.00 0.00 39.03 5.68
3289 4240 1.686355 ACTCATCAACCAAAACGGCA 58.314 45.000 0.00 0.00 39.03 5.69
3290 4241 2.238521 ACTCATCAACCAAAACGGCAT 58.761 42.857 0.00 0.00 39.03 4.40
3291 4242 3.417101 ACTCATCAACCAAAACGGCATA 58.583 40.909 0.00 0.00 39.03 3.14
3292 4243 4.016444 ACTCATCAACCAAAACGGCATAT 58.984 39.130 0.00 0.00 39.03 1.78
3364 4354 6.711194 AGAAGAAATCTATCATGTGGCTCATG 59.289 38.462 20.54 20.54 44.64 3.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.107410 TCGACAAAGGCAGTGGTTGT 60.107 50.000 0.00 0.00 38.17 3.32
2 3 1.981256 ATTCGACAAAGGCAGTGGTT 58.019 45.000 0.00 0.00 0.00 3.67
3 4 2.851263 TATTCGACAAAGGCAGTGGT 57.149 45.000 0.00 0.00 0.00 4.16
4 5 4.497473 TTTTATTCGACAAAGGCAGTGG 57.503 40.909 0.00 0.00 0.00 4.00
34 35 2.471818 CTGAGCTGTATGCAGTAGCTG 58.528 52.381 22.09 8.95 46.95 4.24
54 55 1.262683 GCAATGACGCCTAGATTCAGC 59.737 52.381 0.00 0.00 0.00 4.26
149 156 8.443176 AGATGGATCCATTTCATACAGTTACAT 58.557 33.333 27.93 0.00 36.70 2.29
150 157 7.716560 CAGATGGATCCATTTCATACAGTTACA 59.283 37.037 27.93 0.00 36.70 2.41
151 158 7.933577 TCAGATGGATCCATTTCATACAGTTAC 59.066 37.037 27.93 10.51 36.70 2.50
152 159 7.933577 GTCAGATGGATCCATTTCATACAGTTA 59.066 37.037 27.93 0.00 36.70 2.24
156 163 6.251255 TGTCAGATGGATCCATTTCATACA 57.749 37.500 27.93 21.85 36.70 2.29
238 274 7.381139 GCGTTTTGGTGATAAAAGATCAAAGAA 59.619 33.333 0.00 0.00 30.79 2.52
239 275 6.861055 GCGTTTTGGTGATAAAAGATCAAAGA 59.139 34.615 0.00 0.00 30.79 2.52
254 290 2.707529 AAATGGCCGGCGTTTTGGTG 62.708 55.000 22.54 0.00 0.00 4.17
257 293 0.319469 AAGAAATGGCCGGCGTTTTG 60.319 50.000 24.64 0.00 0.00 2.44
258 294 0.391228 AAAGAAATGGCCGGCGTTTT 59.609 45.000 22.54 21.69 0.00 2.43
286 330 2.350804 CGTCATCAGTTGGAGATGCAAG 59.649 50.000 0.00 0.00 41.98 4.01
292 336 3.440522 CAGTACTCGTCATCAGTTGGAGA 59.559 47.826 0.00 0.00 0.00 3.71
296 340 3.577649 ACCAGTACTCGTCATCAGTTG 57.422 47.619 0.00 0.00 0.00 3.16
298 342 2.352814 GCAACCAGTACTCGTCATCAGT 60.353 50.000 0.00 0.00 0.00 3.41
299 343 2.263077 GCAACCAGTACTCGTCATCAG 58.737 52.381 0.00 0.00 0.00 2.90
314 358 2.615912 GCAGATGGATCTTAGTGCAACC 59.384 50.000 0.00 0.00 33.31 3.77
335 379 3.850122 TCTATCCGAATATCCGCACAG 57.150 47.619 0.00 0.00 0.00 3.66
341 385 6.806751 TGAATTCCGATCTATCCGAATATCC 58.193 40.000 2.27 2.67 34.97 2.59
372 416 0.806868 ACGATTTCGAGCACCGTAGA 59.193 50.000 7.01 0.00 43.02 2.59
380 424 1.079405 TGGTGGGACGATTTCGAGC 60.079 57.895 7.01 0.00 43.02 5.03
404 448 3.381045 CAGCTCTGTTCAGTTACGTGAA 58.619 45.455 0.00 0.00 33.95 3.18
405 449 2.862530 GCAGCTCTGTTCAGTTACGTGA 60.863 50.000 0.00 0.00 0.00 4.35
413 457 2.858868 GCACGCAGCTCTGTTCAG 59.141 61.111 0.00 0.00 41.15 3.02
441 485 5.587388 ATTTCAATGTTCAGTAGCCATGG 57.413 39.130 7.63 7.63 0.00 3.66
443 487 7.446625 GGAGATATTTCAATGTTCAGTAGCCAT 59.553 37.037 0.00 0.00 0.00 4.40
444 488 6.767902 GGAGATATTTCAATGTTCAGTAGCCA 59.232 38.462 0.00 0.00 0.00 4.75
446 490 6.995091 AGGGAGATATTTCAATGTTCAGTAGC 59.005 38.462 0.00 0.00 0.00 3.58
447 491 7.659390 GGAGGGAGATATTTCAATGTTCAGTAG 59.341 40.741 0.00 0.00 0.00 2.57
465 510 5.015178 ACATTTGTTTGATTAGGGAGGGAGA 59.985 40.000 0.00 0.00 0.00 3.71
466 511 5.264395 ACATTTGTTTGATTAGGGAGGGAG 58.736 41.667 0.00 0.00 0.00 4.30
467 512 5.269554 ACATTTGTTTGATTAGGGAGGGA 57.730 39.130 0.00 0.00 0.00 4.20
468 513 7.660030 ATAACATTTGTTTGATTAGGGAGGG 57.340 36.000 0.63 0.00 39.31 4.30
482 527 4.638865 GCTTACCCTCCGAATAACATTTGT 59.361 41.667 0.00 0.00 0.00 2.83
510 555 5.627499 ATTAATCGCTTTTGTGAGAGCAA 57.373 34.783 0.00 0.00 42.73 3.91
523 568 1.202065 CGTGTGCTGCAATTAATCGCT 60.202 47.619 2.77 0.00 0.00 4.93
525 570 1.182673 GCGTGTGCTGCAATTAATCG 58.817 50.000 2.77 4.63 38.39 3.34
543 588 7.814587 AGCCAAAAATAGATTTCTTGTTAGTGC 59.185 33.333 0.00 0.00 0.00 4.40
544 589 9.346725 GAGCCAAAAATAGATTTCTTGTTAGTG 57.653 33.333 0.00 0.00 0.00 2.74
647 692 2.522193 TTGCCGGTTTGGGGGTTC 60.522 61.111 1.90 0.00 38.63 3.62
654 699 2.556622 ACAGTAATTCCTTGCCGGTTTG 59.443 45.455 1.90 0.00 0.00 2.93
678 724 2.104111 TCTGCTAATTATGTCCCGTGGG 59.896 50.000 0.00 0.00 0.00 4.61
695 1364 1.734465 CGTGGACCTTCAATTCTCTGC 59.266 52.381 0.00 0.00 0.00 4.26
745 1416 2.713154 GACGTGTGGTTGGTGCAC 59.287 61.111 8.80 8.80 0.00 4.57
746 1417 2.294132 TACGACGTGTGGTTGGTGCA 62.294 55.000 11.56 0.00 34.03 4.57
774 1446 0.754472 CGCCGGAATTTACTCCCCTA 59.246 55.000 5.05 0.00 31.03 3.53
775 1447 0.979187 TCGCCGGAATTTACTCCCCT 60.979 55.000 5.05 0.00 31.03 4.79
776 1448 0.812811 GTCGCCGGAATTTACTCCCC 60.813 60.000 5.05 0.00 31.03 4.81
777 1449 1.149964 CGTCGCCGGAATTTACTCCC 61.150 60.000 5.05 0.00 31.03 4.30
820 1496 2.620585 TGAGTGAGTGAGTGAGTGAGTG 59.379 50.000 0.00 0.00 0.00 3.51
821 1497 2.621055 GTGAGTGAGTGAGTGAGTGAGT 59.379 50.000 0.00 0.00 0.00 3.41
822 1498 2.884012 AGTGAGTGAGTGAGTGAGTGAG 59.116 50.000 0.00 0.00 0.00 3.51
823 1499 2.937519 AGTGAGTGAGTGAGTGAGTGA 58.062 47.619 0.00 0.00 0.00 3.41
902 1586 0.538057 ACACTTGGTGGATGCACTGG 60.538 55.000 17.44 9.73 37.94 4.00
963 1659 2.101582 ACACTCCACTTCACTCACTCAC 59.898 50.000 0.00 0.00 0.00 3.51
1221 1920 0.236711 TGAGGTCGACGACGTTCTTC 59.763 55.000 22.59 14.01 40.69 2.87
1275 1974 0.670854 GGCGGGTGAAGAGTGAAGTC 60.671 60.000 0.00 0.00 0.00 3.01
1276 1975 1.371558 GGCGGGTGAAGAGTGAAGT 59.628 57.895 0.00 0.00 0.00 3.01
1277 1976 1.738099 CGGCGGGTGAAGAGTGAAG 60.738 63.158 0.00 0.00 0.00 3.02
1278 1977 2.342279 CGGCGGGTGAAGAGTGAA 59.658 61.111 0.00 0.00 0.00 3.18
1279 1978 2.915659 ACGGCGGGTGAAGAGTGA 60.916 61.111 13.24 0.00 0.00 3.41
1280 1979 2.432628 GACGGCGGGTGAAGAGTG 60.433 66.667 13.24 0.00 0.00 3.51
1281 1980 4.052229 CGACGGCGGGTGAAGAGT 62.052 66.667 13.24 0.00 0.00 3.24
1291 2005 1.129998 CTATAGATACCACCGACGGCG 59.870 57.143 15.39 1.94 37.24 6.46
1499 2222 4.133078 GTGGATGGATCAGTGAAAGGATC 58.867 47.826 0.00 0.00 39.31 3.36
1500 2223 3.117738 GGTGGATGGATCAGTGAAAGGAT 60.118 47.826 0.00 0.00 0.00 3.24
1501 2224 2.239654 GGTGGATGGATCAGTGAAAGGA 59.760 50.000 0.00 0.00 0.00 3.36
1502 2225 2.648059 GGTGGATGGATCAGTGAAAGG 58.352 52.381 0.00 0.00 0.00 3.11
1503 2226 2.283298 CGGTGGATGGATCAGTGAAAG 58.717 52.381 0.00 0.00 0.00 2.62
1504 2227 1.628340 ACGGTGGATGGATCAGTGAAA 59.372 47.619 0.00 0.00 0.00 2.69
1510 2234 2.869101 TGAAAACGGTGGATGGATCA 57.131 45.000 0.00 0.00 0.00 2.92
1521 2245 3.077229 TGAAGTGTGCATTGAAAACGG 57.923 42.857 0.00 0.00 0.00 4.44
1579 2303 4.201628 GCACGGAGCATCGATATTCATTAC 60.202 45.833 0.00 0.00 44.79 1.89
1580 2304 3.926527 GCACGGAGCATCGATATTCATTA 59.073 43.478 0.00 0.00 44.79 1.90
1581 2305 2.738846 GCACGGAGCATCGATATTCATT 59.261 45.455 0.00 0.00 44.79 2.57
1582 2306 2.341257 GCACGGAGCATCGATATTCAT 58.659 47.619 0.00 0.00 44.79 2.57
1583 2307 1.783284 GCACGGAGCATCGATATTCA 58.217 50.000 0.00 0.00 44.79 2.57
2089 2819 1.511254 CGATGAAGTCGTCGTGCGA 60.511 57.895 13.54 1.20 46.84 5.10
2292 3022 1.043673 AGATGTAGTCGGTGGAGCCC 61.044 60.000 0.00 0.00 0.00 5.19
2368 3098 2.756207 TCATGGTGGATCAATGTGCTTG 59.244 45.455 0.00 0.00 36.09 4.01
2369 3099 3.090210 TCATGGTGGATCAATGTGCTT 57.910 42.857 0.00 0.00 0.00 3.91
2370 3100 2.812836 TCATGGTGGATCAATGTGCT 57.187 45.000 0.00 0.00 0.00 4.40
2371 3101 2.545113 GCATCATGGTGGATCAATGTGC 60.545 50.000 8.33 2.85 0.00 4.57
2372 3102 2.956333 AGCATCATGGTGGATCAATGTG 59.044 45.455 8.33 0.00 0.00 3.21
2373 3103 3.308035 AGCATCATGGTGGATCAATGT 57.692 42.857 8.33 0.00 0.00 2.71
2374 3104 3.304458 CGAAGCATCATGGTGGATCAATG 60.304 47.826 8.33 0.00 0.00 2.82
2376 3106 2.291365 CGAAGCATCATGGTGGATCAA 58.709 47.619 8.33 0.00 0.00 2.57
2377 3107 1.210234 ACGAAGCATCATGGTGGATCA 59.790 47.619 8.33 0.00 0.00 2.92
2378 3108 1.959042 ACGAAGCATCATGGTGGATC 58.041 50.000 8.33 0.00 0.00 3.36
2379 3109 2.292267 GAACGAAGCATCATGGTGGAT 58.708 47.619 8.33 0.00 0.00 3.41
2380 3110 1.003003 TGAACGAAGCATCATGGTGGA 59.997 47.619 8.33 0.00 0.00 4.02
2381 3111 1.399440 CTGAACGAAGCATCATGGTGG 59.601 52.381 8.33 0.00 0.00 4.61
2391 3126 2.095252 GGTCGAGGCTGAACGAAGC 61.095 63.158 0.00 0.00 42.75 3.86
2393 3128 0.320374 AATGGTCGAGGCTGAACGAA 59.680 50.000 0.00 0.00 40.12 3.85
2408 3154 6.521151 AGAAAGAAATAGGACTGCAAATGG 57.479 37.500 0.00 0.00 0.00 3.16
2419 3165 9.649167 ATGAAAAGCATCAAAGAAAGAAATAGG 57.351 29.630 0.00 0.00 28.85 2.57
2434 3180 4.035675 GGCCGGCTATATATGAAAAGCATC 59.964 45.833 28.56 0.00 38.44 3.91
2435 3181 3.947834 GGCCGGCTATATATGAAAAGCAT 59.052 43.478 28.56 0.00 41.08 3.79
2436 3182 3.343617 GGCCGGCTATATATGAAAAGCA 58.656 45.455 28.56 0.00 36.68 3.91
2437 3183 2.683362 GGGCCGGCTATATATGAAAAGC 59.317 50.000 28.56 3.40 0.00 3.51
2438 3184 4.080863 AGAGGGCCGGCTATATATGAAAAG 60.081 45.833 28.56 0.00 0.00 2.27
2444 3190 3.116096 TCAAGAGGGCCGGCTATATAT 57.884 47.619 28.56 5.84 0.00 0.86
2445 3191 2.615986 TCAAGAGGGCCGGCTATATA 57.384 50.000 28.56 3.20 0.00 0.86
2446 3192 1.958288 ATCAAGAGGGCCGGCTATAT 58.042 50.000 28.56 9.80 0.00 0.86
2447 3193 1.729586 AATCAAGAGGGCCGGCTATA 58.270 50.000 28.56 5.49 0.00 1.31
2451 3197 1.512694 CAAAATCAAGAGGGCCGGC 59.487 57.895 21.18 21.18 0.00 6.13
2453 3199 1.512694 GGCAAAATCAAGAGGGCCG 59.487 57.895 0.00 0.00 0.00 6.13
2458 3213 6.051074 ACTTTTTCTTGGGCAAAATCAAGAG 58.949 36.000 0.00 0.00 46.50 2.85
2504 3263 6.970613 CACACTAGCTGAAATACACGTACATA 59.029 38.462 0.00 0.00 0.00 2.29
2505 3264 5.805486 CACACTAGCTGAAATACACGTACAT 59.195 40.000 0.00 0.00 0.00 2.29
2513 3272 3.619038 GCCTGACACACTAGCTGAAATAC 59.381 47.826 0.00 0.00 0.00 1.89
2538 3304 5.758784 ACAAACTAGCTAGAACAACCTCAAC 59.241 40.000 27.45 0.00 0.00 3.18
2539 3305 5.925509 ACAAACTAGCTAGAACAACCTCAA 58.074 37.500 27.45 0.00 0.00 3.02
2540 3306 5.546621 ACAAACTAGCTAGAACAACCTCA 57.453 39.130 27.45 0.00 0.00 3.86
2541 3307 7.413109 GCATTACAAACTAGCTAGAACAACCTC 60.413 40.741 27.45 5.54 0.00 3.85
2542 3308 6.371825 GCATTACAAACTAGCTAGAACAACCT 59.628 38.462 27.45 0.00 0.00 3.50
2543 3309 6.543736 GCATTACAAACTAGCTAGAACAACC 58.456 40.000 27.45 3.48 0.00 3.77
2544 3310 6.128634 ACGCATTACAAACTAGCTAGAACAAC 60.129 38.462 27.45 6.32 0.00 3.32
2545 3311 5.929992 ACGCATTACAAACTAGCTAGAACAA 59.070 36.000 27.45 12.75 0.00 2.83
2546 3312 5.347635 CACGCATTACAAACTAGCTAGAACA 59.652 40.000 27.45 5.18 0.00 3.18
2627 3402 2.431782 TGATCGATCAGAAGTGGCATGA 59.568 45.455 23.99 0.00 32.11 3.07
2629 3404 3.548745 TTGATCGATCAGAAGTGGCAT 57.451 42.857 25.95 0.00 38.19 4.40
2631 3406 3.201290 ACATTGATCGATCAGAAGTGGC 58.799 45.455 25.95 0.00 38.19 5.01
2633 3408 6.036844 ACATCAACATTGATCGATCAGAAGTG 59.963 38.462 25.95 22.83 45.62 3.16
2634 3409 6.111382 ACATCAACATTGATCGATCAGAAGT 58.889 36.000 25.95 21.46 45.62 3.01
2635 3410 6.600246 ACATCAACATTGATCGATCAGAAG 57.400 37.500 25.95 20.90 45.62 2.85
2636 3411 6.594937 TGAACATCAACATTGATCGATCAGAA 59.405 34.615 25.95 14.63 45.62 3.02
2637 3412 6.108015 TGAACATCAACATTGATCGATCAGA 58.892 36.000 25.95 19.76 45.62 3.27
2638 3413 6.354039 TGAACATCAACATTGATCGATCAG 57.646 37.500 25.95 18.58 45.62 2.90
2640 3415 6.722301 ACATGAACATCAACATTGATCGATC 58.278 36.000 18.72 18.72 45.62 3.69
2643 3418 8.124199 TCAATACATGAACATCAACATTGATCG 58.876 33.333 0.00 3.93 39.41 3.69
2721 3629 8.668510 ATTAATTACTGTGTCATGAAGCTAGG 57.331 34.615 0.00 0.00 0.00 3.02
2735 3643 5.105310 AGTGGAGTCGCAGATTAATTACTGT 60.105 40.000 6.15 0.00 40.67 3.55
2745 3653 3.449018 AGATTTGTAGTGGAGTCGCAGAT 59.551 43.478 0.00 0.00 40.67 2.90
2746 3654 2.826128 AGATTTGTAGTGGAGTCGCAGA 59.174 45.455 0.00 0.00 0.00 4.26
2747 3655 2.926200 CAGATTTGTAGTGGAGTCGCAG 59.074 50.000 0.00 0.00 0.00 5.18
2748 3656 2.560981 TCAGATTTGTAGTGGAGTCGCA 59.439 45.455 0.00 0.00 0.00 5.10
2749 3657 2.924290 GTCAGATTTGTAGTGGAGTCGC 59.076 50.000 0.00 0.00 0.00 5.19
2750 3658 3.172050 CGTCAGATTTGTAGTGGAGTCG 58.828 50.000 0.00 0.00 0.00 4.18
2751 3659 4.167268 GACGTCAGATTTGTAGTGGAGTC 58.833 47.826 11.55 0.00 0.00 3.36
2752 3660 3.572682 TGACGTCAGATTTGTAGTGGAGT 59.427 43.478 15.76 0.00 0.00 3.85
2753 3661 4.174411 TGACGTCAGATTTGTAGTGGAG 57.826 45.455 15.76 0.00 0.00 3.86
2754 3662 4.594123 TTGACGTCAGATTTGTAGTGGA 57.406 40.909 19.11 0.00 0.00 4.02
2755 3663 5.862924 ATTTGACGTCAGATTTGTAGTGG 57.137 39.130 19.11 0.00 0.00 4.00
2756 3664 8.560576 AAAAATTTGACGTCAGATTTGTAGTG 57.439 30.769 34.41 0.00 39.00 2.74
2784 3692 8.934825 CACGAAAAATATTTGATTTTCCATGGT 58.065 29.630 12.58 0.00 40.66 3.55
2785 3693 8.389603 CCACGAAAAATATTTGATTTTCCATGG 58.610 33.333 4.97 4.97 40.66 3.66
2786 3694 7.904461 GCCACGAAAAATATTTGATTTTCCATG 59.096 33.333 0.39 2.83 40.66 3.66
2787 3695 7.605691 TGCCACGAAAAATATTTGATTTTCCAT 59.394 29.630 0.39 0.00 40.66 3.41
2788 3696 6.931281 TGCCACGAAAAATATTTGATTTTCCA 59.069 30.769 0.39 0.00 40.66 3.53
2789 3697 7.357951 TGCCACGAAAAATATTTGATTTTCC 57.642 32.000 0.39 0.00 40.66 3.13
2790 3698 9.824534 ATTTGCCACGAAAAATATTTGATTTTC 57.175 25.926 0.39 1.21 40.46 2.29
2799 3707 9.959749 ACGAATATAATTTGCCACGAAAAATAT 57.040 25.926 0.00 0.00 0.00 1.28
2800 3708 9.440784 GACGAATATAATTTGCCACGAAAAATA 57.559 29.630 0.00 0.00 0.00 1.40
2801 3709 7.165154 CGACGAATATAATTTGCCACGAAAAAT 59.835 33.333 0.00 0.00 0.00 1.82
2802 3710 6.466413 CGACGAATATAATTTGCCACGAAAAA 59.534 34.615 0.00 0.00 0.00 1.94
2803 3711 5.960683 CGACGAATATAATTTGCCACGAAAA 59.039 36.000 0.00 0.00 0.00 2.29
2804 3712 5.063691 ACGACGAATATAATTTGCCACGAAA 59.936 36.000 0.00 0.00 0.00 3.46
2805 3713 4.567558 ACGACGAATATAATTTGCCACGAA 59.432 37.500 0.00 0.00 0.00 3.85
2806 3714 4.026393 CACGACGAATATAATTTGCCACGA 60.026 41.667 0.00 0.00 0.00 4.35
2807 3715 4.200827 CACGACGAATATAATTTGCCACG 58.799 43.478 0.00 0.00 0.00 4.94
2808 3716 4.271533 TCCACGACGAATATAATTTGCCAC 59.728 41.667 0.00 0.00 0.00 5.01
2809 3717 4.443621 TCCACGACGAATATAATTTGCCA 58.556 39.130 0.00 0.00 0.00 4.92
2810 3718 5.382303 CATCCACGACGAATATAATTTGCC 58.618 41.667 0.00 0.00 0.00 4.52
2811 3719 5.049680 ACCATCCACGACGAATATAATTTGC 60.050 40.000 0.00 0.00 0.00 3.68
2812 3720 6.539649 ACCATCCACGACGAATATAATTTG 57.460 37.500 0.00 0.00 0.00 2.32
2813 3721 8.665643 TTTACCATCCACGACGAATATAATTT 57.334 30.769 0.00 0.00 0.00 1.82
2814 3722 8.842358 ATTTACCATCCACGACGAATATAATT 57.158 30.769 0.00 0.00 0.00 1.40
2815 3723 8.842358 AATTTACCATCCACGACGAATATAAT 57.158 30.769 0.00 0.00 0.00 1.28
2816 3724 8.665643 AAATTTACCATCCACGACGAATATAA 57.334 30.769 0.00 0.00 0.00 0.98
2817 3725 9.414295 CTAAATTTACCATCCACGACGAATATA 57.586 33.333 0.00 0.00 0.00 0.86
2818 3726 7.929785 ACTAAATTTACCATCCACGACGAATAT 59.070 33.333 0.00 0.00 0.00 1.28
2819 3727 7.267128 ACTAAATTTACCATCCACGACGAATA 58.733 34.615 0.00 0.00 0.00 1.75
2820 3728 6.110707 ACTAAATTTACCATCCACGACGAAT 58.889 36.000 0.00 0.00 0.00 3.34
2821 3729 5.481105 ACTAAATTTACCATCCACGACGAA 58.519 37.500 0.00 0.00 0.00 3.85
2822 3730 5.075858 ACTAAATTTACCATCCACGACGA 57.924 39.130 0.00 0.00 0.00 4.20
2823 3731 5.789710 AACTAAATTTACCATCCACGACG 57.210 39.130 0.00 0.00 0.00 5.12
2824 3732 5.798434 GCAAACTAAATTTACCATCCACGAC 59.202 40.000 0.00 0.00 0.00 4.34
2825 3733 5.391097 CGCAAACTAAATTTACCATCCACGA 60.391 40.000 0.00 0.00 0.00 4.35
2826 3734 4.791163 CGCAAACTAAATTTACCATCCACG 59.209 41.667 0.00 0.00 0.00 4.94
2827 3735 5.945155 TCGCAAACTAAATTTACCATCCAC 58.055 37.500 0.00 0.00 0.00 4.02
2828 3736 5.941058 TCTCGCAAACTAAATTTACCATCCA 59.059 36.000 0.00 0.00 0.00 3.41
2829 3737 6.431198 TCTCGCAAACTAAATTTACCATCC 57.569 37.500 0.00 0.00 0.00 3.51
2830 3738 7.968405 ACATTCTCGCAAACTAAATTTACCATC 59.032 33.333 0.00 0.00 0.00 3.51
2831 3739 7.826690 ACATTCTCGCAAACTAAATTTACCAT 58.173 30.769 0.00 0.00 0.00 3.55
2832 3740 7.041030 TGACATTCTCGCAAACTAAATTTACCA 60.041 33.333 0.00 0.00 0.00 3.25
2833 3741 7.302524 TGACATTCTCGCAAACTAAATTTACC 58.697 34.615 0.00 0.00 0.00 2.85
2834 3742 8.722342 TTGACATTCTCGCAAACTAAATTTAC 57.278 30.769 0.00 0.00 0.00 2.01
2835 3743 9.906660 ATTTGACATTCTCGCAAACTAAATTTA 57.093 25.926 0.00 0.00 34.72 1.40
2836 3744 8.816640 ATTTGACATTCTCGCAAACTAAATTT 57.183 26.923 0.00 0.00 34.72 1.82
2837 3745 8.299570 AGATTTGACATTCTCGCAAACTAAATT 58.700 29.630 0.00 0.00 34.72 1.82
2838 3746 7.752239 CAGATTTGACATTCTCGCAAACTAAAT 59.248 33.333 0.00 0.00 34.72 1.40
2839 3747 7.077605 CAGATTTGACATTCTCGCAAACTAAA 58.922 34.615 0.00 0.00 34.72 1.85
2840 3748 6.602179 CAGATTTGACATTCTCGCAAACTAA 58.398 36.000 0.00 0.00 34.72 2.24
2841 3749 5.390885 GCAGATTTGACATTCTCGCAAACTA 60.391 40.000 0.00 0.00 34.72 2.24
2842 3750 4.614535 GCAGATTTGACATTCTCGCAAACT 60.615 41.667 0.00 0.00 34.72 2.66
2843 3751 3.605486 GCAGATTTGACATTCTCGCAAAC 59.395 43.478 0.00 0.00 34.72 2.93
2844 3752 3.366273 GGCAGATTTGACATTCTCGCAAA 60.366 43.478 0.00 0.00 36.15 3.68
2845 3753 2.162208 GGCAGATTTGACATTCTCGCAA 59.838 45.455 0.00 0.00 30.39 4.85
2846 3754 1.739466 GGCAGATTTGACATTCTCGCA 59.261 47.619 0.00 0.00 30.39 5.10
2847 3755 2.012673 AGGCAGATTTGACATTCTCGC 58.987 47.619 0.00 0.00 33.45 5.03
2848 3756 5.998454 ATAAGGCAGATTTGACATTCTCG 57.002 39.130 0.00 0.00 33.45 4.04
2890 3798 8.836413 GCAAATTTAGATTGTAGGCACAGTATA 58.164 33.333 0.00 0.00 35.67 1.47
2891 3799 7.201821 GGCAAATTTAGATTGTAGGCACAGTAT 60.202 37.037 0.00 0.00 35.67 2.12
2892 3800 6.094881 GGCAAATTTAGATTGTAGGCACAGTA 59.905 38.462 0.00 0.00 35.67 2.74
2893 3801 5.105756 GGCAAATTTAGATTGTAGGCACAGT 60.106 40.000 0.00 0.00 35.67 3.55
2894 3802 5.105797 TGGCAAATTTAGATTGTAGGCACAG 60.106 40.000 0.00 0.00 35.67 3.66
2895 3803 4.769488 TGGCAAATTTAGATTGTAGGCACA 59.231 37.500 0.00 0.00 0.00 4.57
2896 3804 5.323371 TGGCAAATTTAGATTGTAGGCAC 57.677 39.130 0.00 0.00 0.00 5.01
2897 3805 5.655974 TGATGGCAAATTTAGATTGTAGGCA 59.344 36.000 0.00 0.00 34.69 4.75
2898 3806 6.147864 TGATGGCAAATTTAGATTGTAGGC 57.852 37.500 0.00 0.00 0.00 3.93
2899 3807 7.944061 TGATGATGGCAAATTTAGATTGTAGG 58.056 34.615 0.00 0.00 0.00 3.18
2900 3808 9.406828 CATGATGATGGCAAATTTAGATTGTAG 57.593 33.333 0.00 0.00 0.00 2.74
2901 3809 7.868922 GCATGATGATGGCAAATTTAGATTGTA 59.131 33.333 0.00 0.00 0.00 2.41
2902 3810 6.704493 GCATGATGATGGCAAATTTAGATTGT 59.296 34.615 0.00 0.00 0.00 2.71
2903 3811 7.117241 GCATGATGATGGCAAATTTAGATTG 57.883 36.000 0.00 0.00 0.00 2.67
2916 3824 5.975344 GCGATTTATATTGGCATGATGATGG 59.025 40.000 0.00 0.00 0.00 3.51
2917 3825 5.975344 GGCGATTTATATTGGCATGATGATG 59.025 40.000 0.00 0.00 39.82 3.07
2918 3826 5.653330 TGGCGATTTATATTGGCATGATGAT 59.347 36.000 5.67 0.00 43.64 2.45
2919 3827 5.008980 TGGCGATTTATATTGGCATGATGA 58.991 37.500 5.67 0.00 43.64 2.92
2920 3828 5.313520 TGGCGATTTATATTGGCATGATG 57.686 39.130 5.67 0.00 43.64 3.07
2926 3834 6.701400 ACTTTTTCATGGCGATTTATATTGGC 59.299 34.615 0.00 0.61 40.33 4.52
2927 3835 8.647143 AACTTTTTCATGGCGATTTATATTGG 57.353 30.769 0.00 0.00 0.00 3.16
2931 3839 9.391006 AGTCTAACTTTTTCATGGCGATTTATA 57.609 29.630 0.00 0.00 0.00 0.98
2932 3840 8.281212 AGTCTAACTTTTTCATGGCGATTTAT 57.719 30.769 0.00 0.00 0.00 1.40
2933 3841 7.681939 AGTCTAACTTTTTCATGGCGATTTA 57.318 32.000 0.00 0.00 0.00 1.40
2934 3842 6.575162 AGTCTAACTTTTTCATGGCGATTT 57.425 33.333 0.00 0.00 0.00 2.17
2935 3843 6.381801 CAAGTCTAACTTTTTCATGGCGATT 58.618 36.000 0.00 0.00 36.03 3.34
2936 3844 5.619981 GCAAGTCTAACTTTTTCATGGCGAT 60.620 40.000 0.00 0.00 36.03 4.58
2937 3845 4.320202 GCAAGTCTAACTTTTTCATGGCGA 60.320 41.667 0.00 0.00 36.03 5.54
2938 3846 3.914364 GCAAGTCTAACTTTTTCATGGCG 59.086 43.478 0.00 0.00 36.03 5.69
2939 3847 4.237724 GGCAAGTCTAACTTTTTCATGGC 58.762 43.478 0.00 0.00 36.03 4.40
2940 3848 5.452078 TGGCAAGTCTAACTTTTTCATGG 57.548 39.130 0.00 0.00 36.03 3.66
2941 3849 6.449698 ACATGGCAAGTCTAACTTTTTCATG 58.550 36.000 16.64 16.64 39.90 3.07
2942 3850 6.491403 AGACATGGCAAGTCTAACTTTTTCAT 59.509 34.615 22.63 0.00 44.10 2.57
2943 3851 5.827797 AGACATGGCAAGTCTAACTTTTTCA 59.172 36.000 22.63 0.00 44.10 2.69
2944 3852 6.145535 CAGACATGGCAAGTCTAACTTTTTC 58.854 40.000 23.33 0.00 44.11 2.29
2945 3853 5.010012 CCAGACATGGCAAGTCTAACTTTTT 59.990 40.000 23.33 0.00 44.11 1.94
2946 3854 4.520492 CCAGACATGGCAAGTCTAACTTTT 59.480 41.667 23.33 0.00 44.11 2.27
2947 3855 4.074970 CCAGACATGGCAAGTCTAACTTT 58.925 43.478 23.33 0.00 44.11 2.66
2948 3856 3.679389 CCAGACATGGCAAGTCTAACTT 58.321 45.455 23.33 0.43 44.11 2.66
2949 3857 3.340814 CCAGACATGGCAAGTCTAACT 57.659 47.619 23.33 0.81 44.11 2.24
2961 3869 1.742761 ACGCCAGATTTCCAGACATG 58.257 50.000 0.00 0.00 0.00 3.21
2962 3870 2.496899 AACGCCAGATTTCCAGACAT 57.503 45.000 0.00 0.00 0.00 3.06
2963 3871 2.565391 TCTAACGCCAGATTTCCAGACA 59.435 45.455 0.00 0.00 0.00 3.41
2964 3872 3.247006 TCTAACGCCAGATTTCCAGAC 57.753 47.619 0.00 0.00 0.00 3.51
2965 3873 4.487714 AATCTAACGCCAGATTTCCAGA 57.512 40.909 6.33 0.00 41.46 3.86
2971 3879 7.448748 AACACTAAAAATCTAACGCCAGATT 57.551 32.000 6.33 6.33 45.17 2.40
2972 3880 7.448748 AAACACTAAAAATCTAACGCCAGAT 57.551 32.000 0.00 0.00 36.83 2.90
2973 3881 6.870971 AAACACTAAAAATCTAACGCCAGA 57.129 33.333 0.00 0.00 0.00 3.86
2974 3882 6.302313 CGAAAACACTAAAAATCTAACGCCAG 59.698 38.462 0.00 0.00 0.00 4.85
2975 3883 6.137415 CGAAAACACTAAAAATCTAACGCCA 58.863 36.000 0.00 0.00 0.00 5.69
2976 3884 6.138088 ACGAAAACACTAAAAATCTAACGCC 58.862 36.000 0.00 0.00 0.00 5.68
2977 3885 7.599054 AACGAAAACACTAAAAATCTAACGC 57.401 32.000 0.00 0.00 0.00 4.84
2986 3894 9.710979 CTTGTCAGATAAACGAAAACACTAAAA 57.289 29.630 0.00 0.00 0.00 1.52
2987 3895 9.100554 TCTTGTCAGATAAACGAAAACACTAAA 57.899 29.630 0.00 0.00 0.00 1.85
2988 3896 8.651391 TCTTGTCAGATAAACGAAAACACTAA 57.349 30.769 0.00 0.00 0.00 2.24
2989 3897 8.827177 ATCTTGTCAGATAAACGAAAACACTA 57.173 30.769 0.00 0.00 38.06 2.74
2990 3898 7.730364 ATCTTGTCAGATAAACGAAAACACT 57.270 32.000 0.00 0.00 38.06 3.55
2995 3903 9.447040 CGTCTATATCTTGTCAGATAAACGAAA 57.553 33.333 14.06 0.00 43.86 3.46
2996 3904 8.074370 CCGTCTATATCTTGTCAGATAAACGAA 58.926 37.037 17.71 0.00 43.86 3.85
2997 3905 7.443272 TCCGTCTATATCTTGTCAGATAAACGA 59.557 37.037 17.71 5.97 43.86 3.85
2998 3906 7.534578 GTCCGTCTATATCTTGTCAGATAAACG 59.465 40.741 13.12 13.12 43.86 3.60
2999 3907 7.534578 CGTCCGTCTATATCTTGTCAGATAAAC 59.465 40.741 0.00 0.00 43.86 2.01
3000 3908 7.308408 CCGTCCGTCTATATCTTGTCAGATAAA 60.308 40.741 0.00 0.00 43.86 1.40
3001 3909 6.148976 CCGTCCGTCTATATCTTGTCAGATAA 59.851 42.308 0.00 0.00 43.86 1.75
3002 3910 5.642491 CCGTCCGTCTATATCTTGTCAGATA 59.358 44.000 0.00 0.00 44.61 1.98
3010 3918 3.568853 CCACTTCCGTCCGTCTATATCTT 59.431 47.826 0.00 0.00 0.00 2.40
3023 3931 1.114722 TCCGGTTGTACCACTTCCGT 61.115 55.000 0.00 0.00 38.47 4.69
3025 3933 1.202675 TGTTCCGGTTGTACCACTTCC 60.203 52.381 0.00 0.00 38.47 3.46
3032 3940 4.062991 AGATGACTTTGTTCCGGTTGTAC 58.937 43.478 0.00 0.00 0.00 2.90
3036 3944 3.403038 CAGAGATGACTTTGTTCCGGTT 58.597 45.455 0.00 0.00 0.00 4.44
3053 3970 0.865218 CTAGCTCGCGACTTGCAGAG 60.865 60.000 19.29 12.38 46.97 3.35
3055 3972 0.248825 ATCTAGCTCGCGACTTGCAG 60.249 55.000 19.29 14.07 46.97 4.41
3056 3973 0.248661 GATCTAGCTCGCGACTTGCA 60.249 55.000 19.29 6.28 46.97 4.08
3057 3974 0.030101 AGATCTAGCTCGCGACTTGC 59.970 55.000 3.71 7.91 41.47 4.01
3058 3975 1.064803 ACAGATCTAGCTCGCGACTTG 59.935 52.381 3.71 9.13 0.00 3.16
3060 3977 0.660488 CACAGATCTAGCTCGCGACT 59.340 55.000 3.71 10.64 0.00 4.18
3061 3978 0.378962 ACACAGATCTAGCTCGCGAC 59.621 55.000 3.71 2.10 0.00 5.19
3062 3979 0.378610 CACACAGATCTAGCTCGCGA 59.621 55.000 9.26 9.26 0.00 5.87
3063 3980 0.378610 TCACACAGATCTAGCTCGCG 59.621 55.000 0.00 0.00 0.00 5.87
3064 3981 2.098280 TCTTCACACAGATCTAGCTCGC 59.902 50.000 0.00 0.00 0.00 5.03
3065 3982 4.036144 TCATCTTCACACAGATCTAGCTCG 59.964 45.833 0.00 0.00 30.50 5.03
3066 3983 5.067674 ACTCATCTTCACACAGATCTAGCTC 59.932 44.000 0.00 0.00 30.50 4.09
3067 3984 4.955450 ACTCATCTTCACACAGATCTAGCT 59.045 41.667 0.00 0.00 30.50 3.32
3068 3985 5.042593 CACTCATCTTCACACAGATCTAGC 58.957 45.833 0.00 0.00 30.50 3.42
3069 3986 6.095300 AGTCACTCATCTTCACACAGATCTAG 59.905 42.308 0.00 0.00 30.50 2.43
3070 3987 5.948758 AGTCACTCATCTTCACACAGATCTA 59.051 40.000 0.00 0.00 30.50 1.98
3071 3988 4.771577 AGTCACTCATCTTCACACAGATCT 59.228 41.667 0.00 0.00 30.50 2.75
3072 3989 5.070770 AGTCACTCATCTTCACACAGATC 57.929 43.478 0.00 0.00 30.50 2.75
3073 3990 5.480642 AAGTCACTCATCTTCACACAGAT 57.519 39.130 0.00 0.00 33.44 2.90
3074 3991 4.944619 AAGTCACTCATCTTCACACAGA 57.055 40.909 0.00 0.00 0.00 3.41
3075 3992 4.813161 ACAAAGTCACTCATCTTCACACAG 59.187 41.667 0.00 0.00 0.00 3.66
3076 3993 4.769688 ACAAAGTCACTCATCTTCACACA 58.230 39.130 0.00 0.00 0.00 3.72
3077 3994 5.277538 GGAACAAAGTCACTCATCTTCACAC 60.278 44.000 0.00 0.00 0.00 3.82
3078 3995 4.816385 GGAACAAAGTCACTCATCTTCACA 59.184 41.667 0.00 0.00 0.00 3.58
3079 3996 4.816385 TGGAACAAAGTCACTCATCTTCAC 59.184 41.667 0.00 0.00 31.92 3.18
3080 3997 5.034852 TGGAACAAAGTCACTCATCTTCA 57.965 39.130 0.00 0.00 31.92 3.02
3096 4013 2.064434 TTGCACAGGTTCATGGAACA 57.936 45.000 10.86 0.00 43.54 3.18
3097 4014 3.665745 AATTGCACAGGTTCATGGAAC 57.334 42.857 0.54 0.54 41.32 3.62
3098 4015 4.832266 AGTAAATTGCACAGGTTCATGGAA 59.168 37.500 0.00 0.00 0.00 3.53
3099 4016 4.406456 AGTAAATTGCACAGGTTCATGGA 58.594 39.130 0.00 0.00 0.00 3.41
3100 4017 4.789012 AGTAAATTGCACAGGTTCATGG 57.211 40.909 0.00 0.00 0.00 3.66
3101 4018 6.149308 TCAGTAGTAAATTGCACAGGTTCATG 59.851 38.462 0.00 0.00 0.00 3.07
3102 4019 6.237901 TCAGTAGTAAATTGCACAGGTTCAT 58.762 36.000 0.00 0.00 0.00 2.57
3103 4020 5.616270 TCAGTAGTAAATTGCACAGGTTCA 58.384 37.500 0.00 0.00 0.00 3.18
3104 4021 6.595716 AGATCAGTAGTAAATTGCACAGGTTC 59.404 38.462 0.00 0.00 0.00 3.62
3105 4022 6.372659 CAGATCAGTAGTAAATTGCACAGGTT 59.627 38.462 0.00 0.00 0.00 3.50
3106 4023 5.877012 CAGATCAGTAGTAAATTGCACAGGT 59.123 40.000 0.00 0.00 0.00 4.00
3107 4024 5.877012 ACAGATCAGTAGTAAATTGCACAGG 59.123 40.000 0.00 0.00 0.00 4.00
3108 4025 6.369890 ACACAGATCAGTAGTAAATTGCACAG 59.630 38.462 0.00 0.00 0.00 3.66
3109 4026 6.147656 CACACAGATCAGTAGTAAATTGCACA 59.852 38.462 0.00 0.00 0.00 4.57
3110 4027 6.368791 TCACACAGATCAGTAGTAAATTGCAC 59.631 38.462 0.00 0.00 0.00 4.57
3111 4028 6.463360 TCACACAGATCAGTAGTAAATTGCA 58.537 36.000 0.00 0.00 0.00 4.08
3112 4029 6.968131 TCACACAGATCAGTAGTAAATTGC 57.032 37.500 0.00 0.00 0.00 3.56
3113 4030 8.763049 TCTTCACACAGATCAGTAGTAAATTG 57.237 34.615 0.00 0.00 0.00 2.32
3114 4031 9.593134 GATCTTCACACAGATCAGTAGTAAATT 57.407 33.333 5.92 0.00 46.04 1.82
3125 4042 3.196463 CAGCCTGATCTTCACACAGATC 58.804 50.000 4.07 4.07 46.68 2.75
3126 4043 2.093075 CCAGCCTGATCTTCACACAGAT 60.093 50.000 0.00 0.00 36.12 2.90
3127 4044 1.277273 CCAGCCTGATCTTCACACAGA 59.723 52.381 0.00 0.00 34.07 3.41
3128 4045 1.735386 CCAGCCTGATCTTCACACAG 58.265 55.000 0.00 0.00 0.00 3.66
3129 4046 0.321919 GCCAGCCTGATCTTCACACA 60.322 55.000 0.00 0.00 0.00 3.72
3130 4047 0.321919 TGCCAGCCTGATCTTCACAC 60.322 55.000 0.00 0.00 0.00 3.82
3131 4048 0.622136 ATGCCAGCCTGATCTTCACA 59.378 50.000 0.00 0.00 0.00 3.58
3132 4049 1.022735 CATGCCAGCCTGATCTTCAC 58.977 55.000 0.00 0.00 0.00 3.18
3133 4050 0.106868 CCATGCCAGCCTGATCTTCA 60.107 55.000 0.00 0.00 0.00 3.02
3136 4053 2.924640 CCCATGCCAGCCTGATCT 59.075 61.111 0.00 0.00 0.00 2.75
3152 4069 0.321996 GTATAGCAGTAGCCCTGGCC 59.678 60.000 4.13 0.00 43.56 5.36
3155 4072 5.864474 CGAATTAAGTATAGCAGTAGCCCTG 59.136 44.000 0.00 0.00 43.56 4.45
3158 4075 8.697960 GTTTACGAATTAAGTATAGCAGTAGCC 58.302 37.037 0.00 0.00 43.56 3.93
3177 4094 7.148755 GGCTCTGTTTACGAATTTAGTTTACGA 60.149 37.037 0.00 0.00 0.00 3.43
3178 4095 6.952083 GGCTCTGTTTACGAATTTAGTTTACG 59.048 38.462 0.00 0.00 0.00 3.18
3179 4096 7.743400 GTGGCTCTGTTTACGAATTTAGTTTAC 59.257 37.037 0.00 0.00 0.00 2.01
3180 4097 7.095102 GGTGGCTCTGTTTACGAATTTAGTTTA 60.095 37.037 0.00 0.00 0.00 2.01
3182 4099 5.180680 GGTGGCTCTGTTTACGAATTTAGTT 59.819 40.000 0.00 0.00 0.00 2.24
3183 4100 4.694037 GGTGGCTCTGTTTACGAATTTAGT 59.306 41.667 0.00 0.00 0.00 2.24
3184 4101 4.935808 AGGTGGCTCTGTTTACGAATTTAG 59.064 41.667 0.00 0.00 0.00 1.85
3185 4102 4.901868 AGGTGGCTCTGTTTACGAATTTA 58.098 39.130 0.00 0.00 0.00 1.40
3186 4103 3.751518 AGGTGGCTCTGTTTACGAATTT 58.248 40.909 0.00 0.00 0.00 1.82
3247 4198 5.357742 AGCCAAAGTTGTCAAAAGGAAAT 57.642 34.783 0.00 0.00 0.00 2.17
3251 4202 4.338118 TGAGTAGCCAAAGTTGTCAAAAGG 59.662 41.667 0.00 0.00 0.00 3.11
3256 4207 4.350368 TGATGAGTAGCCAAAGTTGTCA 57.650 40.909 0.00 0.00 0.00 3.58
3266 4217 2.161609 CCGTTTTGGTTGATGAGTAGCC 59.838 50.000 0.00 0.00 0.00 3.93
3275 4226 2.953020 GCAATATGCCGTTTTGGTTGA 58.047 42.857 0.00 0.00 41.21 3.18
3287 4238 7.011576 TCACATTCATTTTTCATGGCAATATGC 59.988 33.333 0.00 0.00 44.08 3.14
3288 4239 8.332464 GTCACATTCATTTTTCATGGCAATATG 58.668 33.333 0.00 0.00 0.00 1.78
3289 4240 8.041919 TGTCACATTCATTTTTCATGGCAATAT 58.958 29.630 0.00 0.00 0.00 1.28
3290 4241 7.331440 GTGTCACATTCATTTTTCATGGCAATA 59.669 33.333 0.00 0.00 0.00 1.90
3291 4242 6.148150 GTGTCACATTCATTTTTCATGGCAAT 59.852 34.615 0.00 0.00 0.00 3.56
3292 4243 5.466058 GTGTCACATTCATTTTTCATGGCAA 59.534 36.000 0.00 0.00 0.00 4.52
3306 4292 3.248602 AGAAACTTGCTCGTGTCACATTC 59.751 43.478 3.42 0.00 0.00 2.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.