Multiple sequence alignment - TraesCS6B01G425800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G425800 chr6B 100.000 4186 0 0 1 4186 694409515 694405330 0.000000e+00 7731.0
1 TraesCS6B01G425800 chr6D 94.806 2503 93 16 806 3297 456562093 456559617 0.000000e+00 3868.0
2 TraesCS6B01G425800 chr6D 88.538 506 44 6 312 805 456562624 456562121 5.990000e-168 601.0
3 TraesCS6B01G425800 chr6D 88.112 286 9 7 3916 4186 456558876 456558601 2.430000e-82 316.0
4 TraesCS6B01G425800 chr6D 91.163 215 14 5 3292 3501 456559578 456559364 1.900000e-73 287.0
5 TraesCS6B01G425800 chr6A 94.202 2501 110 10 806 3297 603300089 603297615 0.000000e+00 3783.0
6 TraesCS6B01G425800 chr6A 83.465 508 46 13 312 807 603300598 603300117 4.970000e-119 438.0
7 TraesCS6B01G425800 chr6A 86.435 317 36 7 1 310 603301054 603300738 1.440000e-89 340.0
8 TraesCS6B01G425800 chr6A 85.830 247 7 4 3957 4186 603282958 603282723 1.950000e-58 237.0
9 TraesCS6B01G425800 chr6A 91.613 155 12 1 3292 3445 603297575 603297421 3.280000e-51 213.0
10 TraesCS6B01G425800 chr5D 75.000 316 64 12 4 310 375582264 375582573 9.440000e-27 132.0
11 TraesCS6B01G425800 chr4A 75.000 320 61 14 1 310 183607786 183607476 3.400000e-26 130.0
12 TraesCS6B01G425800 chr7D 80.451 133 24 2 3 134 203411003 203411134 2.660000e-17 100.0
13 TraesCS6B01G425800 chr2D 83.158 95 14 2 392 485 351996183 351996276 7.460000e-13 86.1
14 TraesCS6B01G425800 chr7B 100.000 34 0 0 452 485 528254821 528254854 3.490000e-06 63.9
15 TraesCS6B01G425800 chr5A 100.000 33 0 0 733 765 454687027 454687059 1.260000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G425800 chr6B 694405330 694409515 4185 True 7731.0 7731 100.00000 1 4186 1 chr6B.!!$R1 4185
1 TraesCS6B01G425800 chr6D 456558601 456562624 4023 True 1268.0 3868 90.65475 312 4186 4 chr6D.!!$R1 3874
2 TraesCS6B01G425800 chr6A 603297421 603301054 3633 True 1193.5 3783 88.92875 1 3445 4 chr6A.!!$R2 3444

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
168 170 0.038526 ACGTTGTCGAGTTAGGCAGG 60.039 55.0 0.0 0.0 40.62 4.85 F
677 835 0.108138 CCTTCAACCCGCTCCAGTAG 60.108 60.0 0.0 0.0 0.00 2.57 F
826 1013 0.515564 CAACGAGTTAAACTGGGCCG 59.484 55.0 0.0 0.0 0.00 6.13 F
2172 2364 0.699577 TTCCTGGGTGGTGGGAGAAA 60.700 55.0 0.0 0.0 37.07 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1785 1977 1.479730 AGAAAGGGATCGAACCGGTAC 59.520 52.381 8.0 0.0 0.0 3.34 R
2172 2364 0.394352 CGCCATTTTGCCTACTCCCT 60.394 55.000 0.0 0.0 0.0 4.20 R
2255 2447 0.548031 ATCTCCACCGCAATCACCAT 59.452 50.000 0.0 0.0 0.0 3.55 R
3537 3788 0.035317 TCTGACGCTGGCAAGTTCAT 59.965 50.000 0.0 0.0 0.0 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 5.299279 ACAACACGGAAGAAGATGTCAAAAT 59.701 36.000 0.00 0.00 0.00 1.82
32 33 3.485877 CGGAAGAAGATGTCAAAATCGCC 60.486 47.826 0.00 0.00 0.00 5.54
65 66 3.944015 CCAGCCATAACTCTCCTTGAAAG 59.056 47.826 0.00 0.00 0.00 2.62
71 72 5.409826 CCATAACTCTCCTTGAAAGACACAC 59.590 44.000 0.00 0.00 0.00 3.82
79 81 1.388547 TGAAAGACACACCAACTGCC 58.611 50.000 0.00 0.00 0.00 4.85
89 91 3.758023 CACACCAACTGCCAATATCTGAA 59.242 43.478 0.00 0.00 0.00 3.02
112 114 2.030274 GGAACCAACAAATCCAAGGACG 60.030 50.000 0.00 0.00 33.30 4.79
123 125 1.347707 TCCAAGGACGCAAACTCTCAT 59.652 47.619 0.00 0.00 0.00 2.90
126 128 2.932614 CAAGGACGCAAACTCTCATAGG 59.067 50.000 0.00 0.00 0.00 2.57
131 133 1.407437 CGCAAACTCTCATAGGCCCTT 60.407 52.381 0.00 0.00 0.00 3.95
135 137 2.750141 ACTCTCATAGGCCCTTCGTA 57.250 50.000 0.00 0.00 0.00 3.43
150 152 0.952280 TCGTAGATGCCGGATCAGAC 59.048 55.000 5.05 7.18 32.86 3.51
152 154 0.669077 GTAGATGCCGGATCAGACGT 59.331 55.000 5.05 0.00 32.86 4.34
153 155 1.067212 GTAGATGCCGGATCAGACGTT 59.933 52.381 5.05 0.00 32.86 3.99
165 167 1.068748 TCAGACGTTGTCGAGTTAGGC 60.069 52.381 0.00 0.00 37.67 3.93
168 170 0.038526 ACGTTGTCGAGTTAGGCAGG 60.039 55.000 0.00 0.00 40.62 4.85
169 171 1.352156 CGTTGTCGAGTTAGGCAGGC 61.352 60.000 0.00 0.00 39.71 4.85
174 178 1.079405 CGAGTTAGGCAGGCCGAAA 60.079 57.895 7.44 2.44 41.95 3.46
205 209 1.067425 CCAACATGACATGCCACCAAG 60.067 52.381 15.49 0.00 0.00 3.61
220 224 2.155732 CACCAAGAACTCGTCGATGTTG 59.844 50.000 12.69 6.74 0.00 3.33
227 231 0.738975 CTCGTCGATGTTGCTAGGGA 59.261 55.000 4.21 0.00 0.00 4.20
230 234 2.028839 TCGTCGATGTTGCTAGGGAAAA 60.029 45.455 4.21 0.00 0.00 2.29
278 286 3.322466 CCCCACTCCTCTTGCCGT 61.322 66.667 0.00 0.00 0.00 5.68
279 287 2.750350 CCCACTCCTCTTGCCGTT 59.250 61.111 0.00 0.00 0.00 4.44
280 288 1.672356 CCCACTCCTCTTGCCGTTG 60.672 63.158 0.00 0.00 0.00 4.10
282 290 0.951040 CCACTCCTCTTGCCGTTGAC 60.951 60.000 0.00 0.00 0.00 3.18
298 306 4.309950 ACGAGGGCACGGGACAAC 62.310 66.667 0.00 0.00 37.61 3.32
310 318 0.673956 GGGACAACGAAGAGAAGGGC 60.674 60.000 0.00 0.00 0.00 5.19
322 468 1.000955 GAGAAGGGCTCAACGTCTTGA 59.999 52.381 0.00 0.00 43.38 3.02
335 481 2.631062 ACGTCTTGATGGAGGTTGTGTA 59.369 45.455 0.00 0.00 31.45 2.90
337 483 3.306088 CGTCTTGATGGAGGTTGTGTAGT 60.306 47.826 0.00 0.00 0.00 2.73
375 521 3.724478 AGTAGGAATGATGTCTCCCACA 58.276 45.455 0.00 0.00 40.18 4.17
449 595 2.609737 GGTGTGTCTTCGTCCGATTTCT 60.610 50.000 0.00 0.00 0.00 2.52
538 696 6.994496 TCTTTTCAATCTGTGACTCACTTCAT 59.006 34.615 10.54 0.00 35.39 2.57
545 703 2.243407 GTGACTCACTTCATCGACGAC 58.757 52.381 0.00 0.00 0.00 4.34
548 706 1.134530 CTCACTTCATCGACGACGGC 61.135 60.000 7.55 0.00 40.21 5.68
553 711 3.250323 CATCGACGACGGCTGCTG 61.250 66.667 6.98 6.98 40.21 4.41
605 763 4.090642 GCACGATGACTTTCAACTGTCTAG 59.909 45.833 0.00 0.00 34.57 2.43
608 766 7.030165 CACGATGACTTTCAACTGTCTAGTAT 58.970 38.462 0.00 0.00 35.69 2.12
622 780 6.653740 ACTGTCTAGTATAACAAAGTTTGCCC 59.346 38.462 15.59 0.00 34.74 5.36
631 789 1.466851 AAAGTTTGCCCAGCTCCAGC 61.467 55.000 0.00 0.00 42.49 4.85
677 835 0.108138 CCTTCAACCCGCTCCAGTAG 60.108 60.000 0.00 0.00 0.00 2.57
685 843 2.636403 ACCCGCTCCAGTAGTTTTAGTT 59.364 45.455 0.00 0.00 0.00 2.24
698 856 6.822170 AGTAGTTTTAGTTATTGCTAGGTGGC 59.178 38.462 0.00 0.00 0.00 5.01
719 877 3.235200 CCCATGGACCTGGTTGTAAAAA 58.765 45.455 15.22 0.00 34.23 1.94
808 995 6.658188 AACAAAAATAGAATTTCCCCGACA 57.342 33.333 0.00 0.00 0.00 4.35
826 1013 0.515564 CAACGAGTTAAACTGGGCCG 59.484 55.000 0.00 0.00 0.00 6.13
874 1061 1.417145 AGCAGGGCTTTGCATTTTTCA 59.583 42.857 14.95 0.00 46.47 2.69
878 1065 2.699846 AGGGCTTTGCATTTTTCACAGA 59.300 40.909 0.00 0.00 0.00 3.41
936 1126 1.225963 GCTCCGTGTCGTCTCGTAC 60.226 63.158 3.69 0.00 0.00 3.67
1581 1773 4.166011 GTGCAGTTCATCGCCGCC 62.166 66.667 0.00 0.00 0.00 6.13
1680 1872 2.501610 GAGATCCTCGGGTGCACC 59.498 66.667 28.57 28.57 0.00 5.01
1983 2175 2.372172 TCTGGAGGAGAAAGGTTTGGAC 59.628 50.000 0.00 0.00 0.00 4.02
2077 2269 2.020131 CAGATTGCATGTCCTCGGC 58.980 57.895 0.00 0.00 0.00 5.54
2172 2364 0.699577 TTCCTGGGTGGTGGGAGAAA 60.700 55.000 0.00 0.00 37.07 2.52
2255 2447 7.001674 ACTTGTGGAAATGGTGATTGTAGTAA 58.998 34.615 0.00 0.00 0.00 2.24
2265 2457 5.356751 TGGTGATTGTAGTAATGGTGATTGC 59.643 40.000 0.00 0.00 0.00 3.56
2310 2502 6.942976 GGAATACCCGATGGATTACTATTCA 58.057 40.000 0.00 0.00 31.17 2.57
2398 2590 4.794762 CACGAGTTCGAATCGGTAATTACA 59.205 41.667 23.88 0.00 44.36 2.41
2399 2591 5.286797 CACGAGTTCGAATCGGTAATTACAA 59.713 40.000 23.88 5.28 44.36 2.41
2461 2653 4.458989 TCTTTCCTTGCACATTATGACACC 59.541 41.667 0.00 0.00 0.00 4.16
2499 2691 2.494059 ACACACGTCTTGCATTTAGCT 58.506 42.857 0.00 0.00 45.94 3.32
2607 2799 5.971763 AGCGGATTTTTGCATGGTAATTTA 58.028 33.333 0.00 0.00 0.00 1.40
2632 2824 7.042797 AGTGAATTGTAGTGTTCTTTTGCAT 57.957 32.000 0.00 0.00 0.00 3.96
2652 2846 5.163764 TGCATAAAGGCGTAAGTGAAATGAG 60.164 40.000 0.00 0.00 41.68 2.90
2693 2887 4.479786 ACCTAGGCTTCTCTGAATTGTC 57.520 45.455 9.30 0.00 0.00 3.18
2784 2983 8.577296 TCGGTATAGAGAGAAATAGGAATGTTG 58.423 37.037 0.00 0.00 0.00 3.33
2794 2993 9.232473 GAGAAATAGGAATGTTGGTTAGTTTCT 57.768 33.333 0.00 0.00 35.58 2.52
2876 3075 0.951558 CTCACCAAACCGAACAAGGG 59.048 55.000 0.00 0.00 35.02 3.95
2886 3085 1.503542 GAACAAGGGCTCATGTGCG 59.496 57.895 13.22 2.63 0.00 5.34
2915 3114 7.060383 TGTGTGGTTTGTTTATGAATCCATT 57.940 32.000 0.00 0.00 34.31 3.16
2916 3115 7.504403 TGTGTGGTTTGTTTATGAATCCATTT 58.496 30.769 0.00 0.00 34.31 2.32
3026 3226 2.807392 CAATTGGTCTGGCGCAATTTTT 59.193 40.909 10.83 0.00 30.79 1.94
3048 3248 9.974980 TTTTTCTCACTGGTTTATTCATTAACC 57.025 29.630 1.43 1.43 43.28 2.85
3072 3272 2.989909 TCCTGCATGATCATTCGTGTT 58.010 42.857 5.16 0.00 40.41 3.32
3089 3289 5.812652 TCGTGTTGACACAAAATTTCTACC 58.187 37.500 14.03 0.00 46.75 3.18
3113 3313 6.152661 CCATGTGTTATATTGGTCTTGTGGTT 59.847 38.462 0.00 0.00 0.00 3.67
3118 3318 9.567848 GTGTTATATTGGTCTTGTGGTTATTTG 57.432 33.333 0.00 0.00 0.00 2.32
3124 3324 7.825331 TTGGTCTTGTGGTTATTTGTATTCA 57.175 32.000 0.00 0.00 0.00 2.57
3125 3325 8.415950 TTGGTCTTGTGGTTATTTGTATTCAT 57.584 30.769 0.00 0.00 0.00 2.57
3126 3326 8.050778 TGGTCTTGTGGTTATTTGTATTCATC 57.949 34.615 0.00 0.00 0.00 2.92
3161 3361 1.543429 GCAGGCAGTAGTGTCCAAGTT 60.543 52.381 11.91 0.00 0.00 2.66
3202 3402 2.768253 TGAAACATCGCTGAGGTCAT 57.232 45.000 0.00 0.00 0.00 3.06
3211 3411 1.153289 CTGAGGTCATGGAAGCCGG 60.153 63.158 0.00 0.00 0.00 6.13
3259 3459 3.888930 TCCAGAATTTTTGACACCAGACC 59.111 43.478 0.00 0.00 0.00 3.85
3290 3490 2.223112 GCATCGTCATTCTTCACGCAAT 60.223 45.455 0.00 0.00 35.93 3.56
3294 3539 2.665245 CGTCATTCTTCACGCAATGCAA 60.665 45.455 5.91 0.00 31.15 4.08
3312 3557 4.388485 TGCAACAAAATACTCTGAGCTCA 58.612 39.130 17.19 17.19 0.00 4.26
3326 3575 6.541641 ACTCTGAGCTCATTTATCATCAAACC 59.458 38.462 18.63 0.00 0.00 3.27
3341 3590 3.417101 TCAAACCAGCCAATGTACGATT 58.583 40.909 0.00 0.00 0.00 3.34
3350 3599 3.168193 CCAATGTACGATTTTGTTCGCC 58.832 45.455 0.00 0.00 42.82 5.54
3420 3670 6.553953 TCCCTGCATCATACTGTAAACTTA 57.446 37.500 0.00 0.00 0.00 2.24
3436 3686 8.188531 TGTAAACTTATGTATCGTTTACTGCC 57.811 34.615 18.95 1.35 46.43 4.85
3454 3704 1.471501 GCCGAATCTTTCCCCAAATGC 60.472 52.381 0.00 0.00 0.00 3.56
3458 3708 3.731867 CGAATCTTTCCCCAAATGCGAAG 60.732 47.826 0.00 0.00 0.00 3.79
3477 3727 2.709213 AGTCTGCTTTGGCTCAGATTC 58.291 47.619 0.00 0.00 40.89 2.52
3520 3771 8.337532 TGATACTACAAAATCTTTGCATCATCG 58.662 33.333 0.00 0.00 0.00 3.84
3521 3772 6.500684 ACTACAAAATCTTTGCATCATCGT 57.499 33.333 0.00 0.00 0.00 3.73
3522 3773 6.913170 ACTACAAAATCTTTGCATCATCGTT 58.087 32.000 0.00 0.00 0.00 3.85
3523 3774 7.023575 ACTACAAAATCTTTGCATCATCGTTC 58.976 34.615 0.00 0.00 0.00 3.95
3524 3775 6.017400 ACAAAATCTTTGCATCATCGTTCT 57.983 33.333 0.00 0.00 0.00 3.01
3525 3776 6.449698 ACAAAATCTTTGCATCATCGTTCTT 58.550 32.000 0.00 0.00 0.00 2.52
3526 3777 6.583806 ACAAAATCTTTGCATCATCGTTCTTC 59.416 34.615 0.00 0.00 0.00 2.87
3527 3778 5.885230 AATCTTTGCATCATCGTTCTTCA 57.115 34.783 0.00 0.00 0.00 3.02
3528 3779 4.668576 TCTTTGCATCATCGTTCTTCAC 57.331 40.909 0.00 0.00 0.00 3.18
3547 3798 2.657336 GCAATGCGATGAACTTGCC 58.343 52.632 0.00 0.00 38.39 4.52
3548 3799 0.109179 GCAATGCGATGAACTTGCCA 60.109 50.000 0.00 0.00 38.39 4.92
3549 3800 1.904144 CAATGCGATGAACTTGCCAG 58.096 50.000 0.00 0.00 32.74 4.85
3550 3801 0.171903 AATGCGATGAACTTGCCAGC 59.828 50.000 0.00 0.00 32.74 4.85
3551 3802 1.985447 ATGCGATGAACTTGCCAGCG 61.985 55.000 0.00 0.00 44.98 5.18
3552 3803 2.680913 GCGATGAACTTGCCAGCGT 61.681 57.895 0.00 0.00 44.18 5.07
3553 3804 1.421485 CGATGAACTTGCCAGCGTC 59.579 57.895 0.00 0.00 38.44 5.19
3554 3805 1.291184 CGATGAACTTGCCAGCGTCA 61.291 55.000 0.00 0.00 38.44 4.35
3555 3806 0.445436 GATGAACTTGCCAGCGTCAG 59.555 55.000 0.00 0.00 0.00 3.51
3556 3807 0.035317 ATGAACTTGCCAGCGTCAGA 59.965 50.000 0.00 0.00 0.00 3.27
3557 3808 0.179059 TGAACTTGCCAGCGTCAGAA 60.179 50.000 0.00 0.00 0.00 3.02
3558 3809 1.160137 GAACTTGCCAGCGTCAGAAT 58.840 50.000 0.00 0.00 0.00 2.40
3559 3810 2.289382 TGAACTTGCCAGCGTCAGAATA 60.289 45.455 0.00 0.00 0.00 1.75
3560 3811 1.726853 ACTTGCCAGCGTCAGAATAC 58.273 50.000 0.00 0.00 0.00 1.89
3561 3812 1.276421 ACTTGCCAGCGTCAGAATACT 59.724 47.619 0.00 0.00 0.00 2.12
3562 3813 2.496070 ACTTGCCAGCGTCAGAATACTA 59.504 45.455 0.00 0.00 0.00 1.82
3563 3814 3.133003 ACTTGCCAGCGTCAGAATACTAT 59.867 43.478 0.00 0.00 0.00 2.12
3564 3815 4.341235 ACTTGCCAGCGTCAGAATACTATA 59.659 41.667 0.00 0.00 0.00 1.31
3565 3816 5.011125 ACTTGCCAGCGTCAGAATACTATAT 59.989 40.000 0.00 0.00 0.00 0.86
3566 3817 4.809673 TGCCAGCGTCAGAATACTATATG 58.190 43.478 0.00 0.00 0.00 1.78
3567 3818 3.614616 GCCAGCGTCAGAATACTATATGC 59.385 47.826 0.00 0.00 0.00 3.14
3568 3819 4.619394 GCCAGCGTCAGAATACTATATGCT 60.619 45.833 0.00 0.00 35.40 3.79
3569 3820 5.473931 CCAGCGTCAGAATACTATATGCTT 58.526 41.667 0.00 0.00 33.90 3.91
3570 3821 5.574830 CCAGCGTCAGAATACTATATGCTTC 59.425 44.000 0.00 0.00 33.90 3.86
3571 3822 6.385843 CAGCGTCAGAATACTATATGCTTCT 58.614 40.000 0.00 0.00 33.90 2.85
3572 3823 6.865726 CAGCGTCAGAATACTATATGCTTCTT 59.134 38.462 0.00 0.00 33.90 2.52
3573 3824 7.383572 CAGCGTCAGAATACTATATGCTTCTTT 59.616 37.037 0.00 0.00 33.90 2.52
3574 3825 7.928706 AGCGTCAGAATACTATATGCTTCTTTT 59.071 33.333 0.00 0.00 32.98 2.27
3575 3826 9.193133 GCGTCAGAATACTATATGCTTCTTTTA 57.807 33.333 0.00 0.00 0.00 1.52
3586 3837 9.455847 CTATATGCTTCTTTTATCAAACAAGCC 57.544 33.333 9.10 0.00 36.43 4.35
3587 3838 5.528043 TGCTTCTTTTATCAAACAAGCCA 57.472 34.783 9.10 0.00 36.43 4.75
3588 3839 5.531634 TGCTTCTTTTATCAAACAAGCCAG 58.468 37.500 9.10 0.00 36.43 4.85
3589 3840 5.068987 TGCTTCTTTTATCAAACAAGCCAGT 59.931 36.000 9.10 0.00 36.43 4.00
3590 3841 5.403466 GCTTCTTTTATCAAACAAGCCAGTG 59.597 40.000 2.03 0.00 33.44 3.66
3591 3842 6.463995 TTCTTTTATCAAACAAGCCAGTGT 57.536 33.333 0.00 0.00 0.00 3.55
3592 3843 7.575414 TTCTTTTATCAAACAAGCCAGTGTA 57.425 32.000 0.00 0.00 0.00 2.90
3593 3844 6.966021 TCTTTTATCAAACAAGCCAGTGTAC 58.034 36.000 0.00 0.00 0.00 2.90
3594 3845 5.351233 TTTATCAAACAAGCCAGTGTACG 57.649 39.130 0.00 0.00 0.00 3.67
3595 3846 2.605837 TCAAACAAGCCAGTGTACGA 57.394 45.000 0.00 0.00 0.00 3.43
3596 3847 3.120321 TCAAACAAGCCAGTGTACGAT 57.880 42.857 0.00 0.00 0.00 3.73
3597 3848 3.472652 TCAAACAAGCCAGTGTACGATT 58.527 40.909 0.00 0.00 0.00 3.34
3598 3849 3.880490 TCAAACAAGCCAGTGTACGATTT 59.120 39.130 0.00 0.00 0.00 2.17
3599 3850 3.896648 AACAAGCCAGTGTACGATTTG 57.103 42.857 0.00 0.00 0.00 2.32
3600 3851 2.846193 ACAAGCCAGTGTACGATTTGT 58.154 42.857 0.00 0.00 0.00 2.83
3601 3852 3.211045 ACAAGCCAGTGTACGATTTGTT 58.789 40.909 0.00 0.00 0.00 2.83
3602 3853 3.250040 ACAAGCCAGTGTACGATTTGTTC 59.750 43.478 0.00 0.00 0.00 3.18
3603 3854 3.120321 AGCCAGTGTACGATTTGTTCA 57.880 42.857 0.00 0.00 0.00 3.18
3604 3855 3.674997 AGCCAGTGTACGATTTGTTCAT 58.325 40.909 0.00 0.00 30.12 2.57
3605 3856 4.072131 AGCCAGTGTACGATTTGTTCATT 58.928 39.130 0.00 0.00 30.12 2.57
3606 3857 4.083324 AGCCAGTGTACGATTTGTTCATTG 60.083 41.667 0.00 0.80 36.01 2.82
3607 3858 4.158384 CCAGTGTACGATTTGTTCATTGC 58.842 43.478 0.00 0.00 35.27 3.56
3608 3859 4.083324 CCAGTGTACGATTTGTTCATTGCT 60.083 41.667 0.00 0.00 35.27 3.91
3609 3860 4.847757 CAGTGTACGATTTGTTCATTGCTG 59.152 41.667 0.00 0.00 31.01 4.41
3610 3861 4.083324 AGTGTACGATTTGTTCATTGCTGG 60.083 41.667 0.00 0.00 30.12 4.85
3611 3862 4.068599 TGTACGATTTGTTCATTGCTGGA 58.931 39.130 0.00 0.00 0.00 3.86
3612 3863 4.699735 TGTACGATTTGTTCATTGCTGGAT 59.300 37.500 0.00 0.00 0.00 3.41
3613 3864 4.100707 ACGATTTGTTCATTGCTGGATG 57.899 40.909 0.00 0.00 0.00 3.51
3614 3865 3.507233 ACGATTTGTTCATTGCTGGATGT 59.493 39.130 0.00 0.00 0.00 3.06
3615 3866 4.699735 ACGATTTGTTCATTGCTGGATGTA 59.300 37.500 0.00 0.00 0.00 2.29
3616 3867 5.357878 ACGATTTGTTCATTGCTGGATGTAT 59.642 36.000 0.00 0.00 0.00 2.29
3617 3868 6.542005 ACGATTTGTTCATTGCTGGATGTATA 59.458 34.615 0.00 0.00 0.00 1.47
3618 3869 6.852853 CGATTTGTTCATTGCTGGATGTATAC 59.147 38.462 0.00 0.00 0.00 1.47
3619 3870 7.254898 CGATTTGTTCATTGCTGGATGTATACT 60.255 37.037 4.17 0.00 0.00 2.12
3620 3871 6.682423 TTGTTCATTGCTGGATGTATACTG 57.318 37.500 4.17 0.00 0.00 2.74
3621 3872 5.125356 TGTTCATTGCTGGATGTATACTGG 58.875 41.667 4.17 0.00 0.00 4.00
3622 3873 5.126067 GTTCATTGCTGGATGTATACTGGT 58.874 41.667 4.17 0.00 0.00 4.00
3623 3874 5.372343 TCATTGCTGGATGTATACTGGTT 57.628 39.130 4.17 0.00 0.00 3.67
3624 3875 6.493189 TCATTGCTGGATGTATACTGGTTA 57.507 37.500 4.17 0.00 0.00 2.85
3625 3876 6.288294 TCATTGCTGGATGTATACTGGTTAC 58.712 40.000 4.17 0.00 0.00 2.50
3626 3877 5.950544 TTGCTGGATGTATACTGGTTACT 57.049 39.130 4.17 0.00 0.00 2.24
3627 3878 7.289084 TCATTGCTGGATGTATACTGGTTACTA 59.711 37.037 4.17 0.00 0.00 1.82
3628 3879 7.426606 TTGCTGGATGTATACTGGTTACTAA 57.573 36.000 4.17 0.00 0.00 2.24
3629 3880 7.050970 TGCTGGATGTATACTGGTTACTAAG 57.949 40.000 4.17 0.00 0.00 2.18
3630 3881 6.837048 TGCTGGATGTATACTGGTTACTAAGA 59.163 38.462 4.17 0.00 0.00 2.10
3631 3882 7.509318 TGCTGGATGTATACTGGTTACTAAGAT 59.491 37.037 4.17 0.00 0.00 2.40
3632 3883 7.815068 GCTGGATGTATACTGGTTACTAAGATG 59.185 40.741 4.17 0.00 0.00 2.90
3633 3884 8.777578 TGGATGTATACTGGTTACTAAGATGT 57.222 34.615 4.17 0.00 0.00 3.06
3634 3885 9.871175 TGGATGTATACTGGTTACTAAGATGTA 57.129 33.333 4.17 0.00 0.00 2.29
3640 3891 6.690194 ACTGGTTACTAAGATGTACTACCG 57.310 41.667 0.00 0.00 30.08 4.02
3641 3892 5.067023 ACTGGTTACTAAGATGTACTACCGC 59.933 44.000 0.00 0.00 30.08 5.68
3642 3893 5.195940 TGGTTACTAAGATGTACTACCGCT 58.804 41.667 0.00 0.00 30.08 5.52
3643 3894 5.066893 TGGTTACTAAGATGTACTACCGCTG 59.933 44.000 0.00 0.00 30.08 5.18
3644 3895 5.067023 GGTTACTAAGATGTACTACCGCTGT 59.933 44.000 0.00 0.00 0.00 4.40
3645 3896 6.260936 GGTTACTAAGATGTACTACCGCTGTA 59.739 42.308 0.00 0.00 0.00 2.74
3646 3897 7.201732 GGTTACTAAGATGTACTACCGCTGTAA 60.202 40.741 0.00 0.00 0.00 2.41
3647 3898 6.764308 ACTAAGATGTACTACCGCTGTAAA 57.236 37.500 0.00 0.00 0.00 2.01
3648 3899 6.558909 ACTAAGATGTACTACCGCTGTAAAC 58.441 40.000 0.00 0.00 0.00 2.01
3649 3900 5.656213 AAGATGTACTACCGCTGTAAACT 57.344 39.130 0.00 0.00 0.00 2.66
3650 3901 6.764308 AAGATGTACTACCGCTGTAAACTA 57.236 37.500 0.00 0.00 0.00 2.24
3651 3902 6.764308 AGATGTACTACCGCTGTAAACTAA 57.236 37.500 0.00 0.00 0.00 2.24
3652 3903 7.344095 AGATGTACTACCGCTGTAAACTAAT 57.656 36.000 0.00 0.00 0.00 1.73
3653 3904 8.455903 AGATGTACTACCGCTGTAAACTAATA 57.544 34.615 0.00 0.00 0.00 0.98
3654 3905 8.348507 AGATGTACTACCGCTGTAAACTAATAC 58.651 37.037 0.00 0.00 0.00 1.89
3655 3906 7.389803 TGTACTACCGCTGTAAACTAATACA 57.610 36.000 0.00 0.00 34.72 2.29
3656 3907 7.825681 TGTACTACCGCTGTAAACTAATACAA 58.174 34.615 0.00 0.00 35.48 2.41
3657 3908 7.970061 TGTACTACCGCTGTAAACTAATACAAG 59.030 37.037 0.00 0.00 35.48 3.16
3658 3909 7.161773 ACTACCGCTGTAAACTAATACAAGA 57.838 36.000 0.00 0.00 35.48 3.02
3659 3910 7.605449 ACTACCGCTGTAAACTAATACAAGAA 58.395 34.615 0.00 0.00 35.48 2.52
3660 3911 6.716898 ACCGCTGTAAACTAATACAAGAAC 57.283 37.500 0.00 0.00 35.48 3.01
3661 3912 6.225318 ACCGCTGTAAACTAATACAAGAACA 58.775 36.000 0.00 0.00 35.48 3.18
3662 3913 6.146673 ACCGCTGTAAACTAATACAAGAACAC 59.853 38.462 0.00 0.00 35.48 3.32
3663 3914 6.146510 CCGCTGTAAACTAATACAAGAACACA 59.853 38.462 0.00 0.00 35.48 3.72
3664 3915 7.227461 CGCTGTAAACTAATACAAGAACACAG 58.773 38.462 0.00 0.00 35.48 3.66
3665 3916 7.519002 GCTGTAAACTAATACAAGAACACAGG 58.481 38.462 0.00 0.00 35.48 4.00
3666 3917 7.172703 GCTGTAAACTAATACAAGAACACAGGT 59.827 37.037 0.00 0.00 35.48 4.00
3667 3918 8.373048 TGTAAACTAATACAAGAACACAGGTG 57.627 34.615 0.00 0.00 33.02 4.00
3668 3919 7.988599 TGTAAACTAATACAAGAACACAGGTGT 59.011 33.333 0.00 0.00 37.87 4.16
3669 3920 9.480053 GTAAACTAATACAAGAACACAGGTGTA 57.520 33.333 5.36 0.00 44.13 2.90
3670 3921 7.958053 AACTAATACAAGAACACAGGTGTAC 57.042 36.000 5.36 0.00 44.13 2.90
3671 3922 7.299246 ACTAATACAAGAACACAGGTGTACT 57.701 36.000 5.36 0.00 44.13 2.73
3672 3923 7.732996 ACTAATACAAGAACACAGGTGTACTT 58.267 34.615 5.36 0.00 44.13 2.24
3673 3924 8.208903 ACTAATACAAGAACACAGGTGTACTTT 58.791 33.333 5.36 0.00 44.13 2.66
3674 3925 7.875327 AATACAAGAACACAGGTGTACTTTT 57.125 32.000 5.36 0.00 44.13 2.27
3675 3926 5.560966 ACAAGAACACAGGTGTACTTTTG 57.439 39.130 5.36 10.07 44.13 2.44
3676 3927 5.007682 ACAAGAACACAGGTGTACTTTTGT 58.992 37.500 5.36 10.60 44.13 2.83
3677 3928 5.106317 ACAAGAACACAGGTGTACTTTTGTG 60.106 40.000 17.00 17.00 44.13 3.33
3678 3929 4.839121 AGAACACAGGTGTACTTTTGTGA 58.161 39.130 22.20 0.00 44.13 3.58
3679 3930 5.437060 AGAACACAGGTGTACTTTTGTGAT 58.563 37.500 22.20 14.81 44.13 3.06
3680 3931 5.527582 AGAACACAGGTGTACTTTTGTGATC 59.472 40.000 22.20 19.92 44.13 2.92
3681 3932 5.036117 ACACAGGTGTACTTTTGTGATCT 57.964 39.130 22.20 5.92 42.90 2.75
3682 3933 6.169557 ACACAGGTGTACTTTTGTGATCTA 57.830 37.500 22.20 0.00 42.90 1.98
3683 3934 6.588204 ACACAGGTGTACTTTTGTGATCTAA 58.412 36.000 22.20 0.00 42.90 2.10
3684 3935 7.051623 ACACAGGTGTACTTTTGTGATCTAAA 58.948 34.615 22.20 0.00 42.90 1.85
3685 3936 7.012044 ACACAGGTGTACTTTTGTGATCTAAAC 59.988 37.037 22.20 0.00 42.90 2.01
3686 3937 6.202188 ACAGGTGTACTTTTGTGATCTAAACG 59.798 38.462 0.00 0.00 0.00 3.60
3687 3938 5.699458 AGGTGTACTTTTGTGATCTAAACGG 59.301 40.000 0.00 0.00 0.00 4.44
3688 3939 5.467735 GGTGTACTTTTGTGATCTAAACGGT 59.532 40.000 0.00 1.38 0.00 4.83
3689 3940 6.347160 GGTGTACTTTTGTGATCTAAACGGTC 60.347 42.308 0.00 0.00 0.00 4.79
3690 3941 6.423001 GTGTACTTTTGTGATCTAAACGGTCT 59.577 38.462 0.00 0.00 0.00 3.85
3691 3942 6.987992 TGTACTTTTGTGATCTAAACGGTCTT 59.012 34.615 0.00 0.00 0.00 3.01
3692 3943 6.300354 ACTTTTGTGATCTAAACGGTCTTG 57.700 37.500 0.00 0.00 0.00 3.02
3693 3944 5.820947 ACTTTTGTGATCTAAACGGTCTTGT 59.179 36.000 0.00 0.00 0.00 3.16
3694 3945 6.317893 ACTTTTGTGATCTAAACGGTCTTGTT 59.682 34.615 0.00 0.00 0.00 2.83
3695 3946 6.687081 TTTGTGATCTAAACGGTCTTGTTT 57.313 33.333 0.00 0.00 43.95 2.83
3696 3947 6.687081 TTGTGATCTAAACGGTCTTGTTTT 57.313 33.333 0.00 0.00 41.92 2.43
3697 3948 6.295039 TGTGATCTAAACGGTCTTGTTTTC 57.705 37.500 0.00 0.00 41.92 2.29
3698 3949 6.053005 TGTGATCTAAACGGTCTTGTTTTCT 58.947 36.000 0.00 0.00 41.92 2.52
3699 3950 6.540914 TGTGATCTAAACGGTCTTGTTTTCTT 59.459 34.615 0.00 0.00 41.92 2.52
3700 3951 7.066525 TGTGATCTAAACGGTCTTGTTTTCTTT 59.933 33.333 0.00 0.00 41.92 2.52
3701 3952 8.553696 GTGATCTAAACGGTCTTGTTTTCTTTA 58.446 33.333 0.00 0.00 41.92 1.85
3702 3953 8.553696 TGATCTAAACGGTCTTGTTTTCTTTAC 58.446 33.333 0.00 0.00 41.92 2.01
3703 3954 7.846644 TCTAAACGGTCTTGTTTTCTTTACA 57.153 32.000 0.00 0.00 41.92 2.41
3704 3955 7.912383 TCTAAACGGTCTTGTTTTCTTTACAG 58.088 34.615 0.00 0.00 41.92 2.74
3705 3956 6.746745 AAACGGTCTTGTTTTCTTTACAGA 57.253 33.333 0.00 0.00 38.89 3.41
3706 3957 6.746745 AACGGTCTTGTTTTCTTTACAGAA 57.253 33.333 0.00 0.00 37.24 3.02
3707 3958 6.937436 ACGGTCTTGTTTTCTTTACAGAAT 57.063 33.333 0.00 0.00 38.89 2.40
3708 3959 7.329588 ACGGTCTTGTTTTCTTTACAGAATT 57.670 32.000 0.00 0.00 38.89 2.17
3709 3960 7.193595 ACGGTCTTGTTTTCTTTACAGAATTG 58.806 34.615 0.00 0.00 38.89 2.32
3710 3961 7.066525 ACGGTCTTGTTTTCTTTACAGAATTGA 59.933 33.333 0.00 0.00 38.89 2.57
3711 3962 7.913297 CGGTCTTGTTTTCTTTACAGAATTGAA 59.087 33.333 0.00 0.00 38.89 2.69
3712 3963 9.020813 GGTCTTGTTTTCTTTACAGAATTGAAC 57.979 33.333 0.00 0.00 38.89 3.18
3713 3964 9.788960 GTCTTGTTTTCTTTACAGAATTGAACT 57.211 29.630 6.35 0.00 38.89 3.01
3714 3965 9.787532 TCTTGTTTTCTTTACAGAATTGAACTG 57.212 29.630 6.35 0.00 38.89 3.16
3715 3966 7.985634 TGTTTTCTTTACAGAATTGAACTGC 57.014 32.000 6.35 0.00 38.89 4.40
3716 3967 7.542890 TGTTTTCTTTACAGAATTGAACTGCA 58.457 30.769 6.35 0.00 38.89 4.41
3717 3968 8.031864 TGTTTTCTTTACAGAATTGAACTGCAA 58.968 29.630 6.35 0.00 38.89 4.08
3718 3969 7.985634 TTTCTTTACAGAATTGAACTGCAAC 57.014 32.000 0.00 0.00 38.89 4.17
3719 3970 6.942532 TCTTTACAGAATTGAACTGCAACT 57.057 33.333 0.00 0.00 39.78 3.16
3720 3971 7.333528 TCTTTACAGAATTGAACTGCAACTT 57.666 32.000 0.00 0.00 39.78 2.66
3721 3972 7.771183 TCTTTACAGAATTGAACTGCAACTTT 58.229 30.769 0.00 0.00 39.78 2.66
3722 3973 8.250332 TCTTTACAGAATTGAACTGCAACTTTT 58.750 29.630 0.00 0.00 39.78 2.27
3723 3974 7.985634 TTACAGAATTGAACTGCAACTTTTC 57.014 32.000 0.00 0.00 39.78 2.29
3724 3975 5.351458 ACAGAATTGAACTGCAACTTTTCC 58.649 37.500 0.00 0.00 39.78 3.13
3725 3976 4.746611 CAGAATTGAACTGCAACTTTTCCC 59.253 41.667 0.00 0.00 39.78 3.97
3726 3977 4.405358 AGAATTGAACTGCAACTTTTCCCA 59.595 37.500 0.00 0.00 39.78 4.37
3727 3978 4.751767 ATTGAACTGCAACTTTTCCCAA 57.248 36.364 0.00 0.00 39.78 4.12
3728 3979 4.543590 TTGAACTGCAACTTTTCCCAAA 57.456 36.364 0.00 0.00 0.00 3.28
3729 3980 4.543590 TGAACTGCAACTTTTCCCAAAA 57.456 36.364 0.00 0.00 0.00 2.44
3730 3981 5.096443 TGAACTGCAACTTTTCCCAAAAT 57.904 34.783 0.00 0.00 0.00 1.82
3731 3982 4.874966 TGAACTGCAACTTTTCCCAAAATG 59.125 37.500 0.00 0.00 0.00 2.32
3732 3983 4.486125 ACTGCAACTTTTCCCAAAATGT 57.514 36.364 0.00 0.00 35.05 2.71
3733 3984 4.190772 ACTGCAACTTTTCCCAAAATGTG 58.809 39.130 0.00 0.00 34.15 3.21
3734 3985 4.081198 ACTGCAACTTTTCCCAAAATGTGA 60.081 37.500 0.00 0.00 34.15 3.58
3735 3986 4.836825 TGCAACTTTTCCCAAAATGTGAA 58.163 34.783 0.00 0.00 34.15 3.18
3736 3987 5.248640 TGCAACTTTTCCCAAAATGTGAAA 58.751 33.333 0.00 0.00 34.15 2.69
3737 3988 5.884792 TGCAACTTTTCCCAAAATGTGAAAT 59.115 32.000 0.00 0.00 34.15 2.17
3738 3989 6.038050 TGCAACTTTTCCCAAAATGTGAAATC 59.962 34.615 0.00 0.00 34.15 2.17
3739 3990 6.260714 GCAACTTTTCCCAAAATGTGAAATCT 59.739 34.615 0.00 0.00 34.15 2.40
3740 3991 7.632721 CAACTTTTCCCAAAATGTGAAATCTG 58.367 34.615 0.00 0.00 34.15 2.90
3741 3992 6.888105 ACTTTTCCCAAAATGTGAAATCTGT 58.112 32.000 0.00 0.00 33.04 3.41
3742 3993 7.337938 ACTTTTCCCAAAATGTGAAATCTGTT 58.662 30.769 0.00 0.00 33.04 3.16
3743 3994 7.828717 ACTTTTCCCAAAATGTGAAATCTGTTT 59.171 29.630 0.00 0.00 33.04 2.83
3744 3995 8.572855 TTTTCCCAAAATGTGAAATCTGTTTT 57.427 26.923 0.00 0.00 0.00 2.43
3745 3996 7.551035 TTCCCAAAATGTGAAATCTGTTTTG 57.449 32.000 0.00 0.00 38.70 2.44
3747 3998 5.750650 CCAAAATGTGAAATCTGTTTTGGC 58.249 37.500 13.06 0.00 46.55 4.52
3748 3999 5.528320 CCAAAATGTGAAATCTGTTTTGGCT 59.472 36.000 13.06 0.00 46.55 4.75
3749 4000 6.293027 CCAAAATGTGAAATCTGTTTTGGCTC 60.293 38.462 13.06 0.00 46.55 4.70
3750 4001 5.534207 AATGTGAAATCTGTTTTGGCTCA 57.466 34.783 0.00 0.00 0.00 4.26
3751 4002 4.998671 TGTGAAATCTGTTTTGGCTCAA 57.001 36.364 0.00 0.00 0.00 3.02
3752 4003 5.336150 TGTGAAATCTGTTTTGGCTCAAA 57.664 34.783 0.00 0.00 0.00 2.69
3753 4004 5.916318 TGTGAAATCTGTTTTGGCTCAAAT 58.084 33.333 1.89 0.00 33.19 2.32
3754 4005 6.347696 TGTGAAATCTGTTTTGGCTCAAATT 58.652 32.000 1.89 0.00 33.19 1.82
3755 4006 7.495901 TGTGAAATCTGTTTTGGCTCAAATTA 58.504 30.769 1.89 0.00 33.19 1.40
3756 4007 8.149647 TGTGAAATCTGTTTTGGCTCAAATTAT 58.850 29.630 1.89 0.00 33.19 1.28
3757 4008 8.992073 GTGAAATCTGTTTTGGCTCAAATTATT 58.008 29.630 1.89 0.00 33.19 1.40
3758 4009 9.558396 TGAAATCTGTTTTGGCTCAAATTATTT 57.442 25.926 1.89 5.86 33.19 1.40
3763 4014 9.474920 TCTGTTTTGGCTCAAATTATTTAGTTG 57.525 29.630 1.89 0.00 33.19 3.16
3764 4015 8.600449 TGTTTTGGCTCAAATTATTTAGTTGG 57.400 30.769 1.89 0.00 33.19 3.77
3765 4016 7.172361 TGTTTTGGCTCAAATTATTTAGTTGGC 59.828 33.333 1.89 0.00 33.19 4.52
3766 4017 6.603940 TTGGCTCAAATTATTTAGTTGGCT 57.396 33.333 0.00 0.00 0.00 4.75
3767 4018 7.710676 TTGGCTCAAATTATTTAGTTGGCTA 57.289 32.000 0.00 0.00 0.00 3.93
3768 4019 7.896383 TGGCTCAAATTATTTAGTTGGCTAT 57.104 32.000 0.00 0.00 0.00 2.97
3769 4020 7.940850 TGGCTCAAATTATTTAGTTGGCTATC 58.059 34.615 0.00 0.00 0.00 2.08
3770 4021 7.559533 TGGCTCAAATTATTTAGTTGGCTATCA 59.440 33.333 0.00 0.00 0.00 2.15
3771 4022 7.862873 GGCTCAAATTATTTAGTTGGCTATCAC 59.137 37.037 0.00 0.00 0.00 3.06
3772 4023 8.405531 GCTCAAATTATTTAGTTGGCTATCACA 58.594 33.333 0.00 0.00 0.00 3.58
3781 4032 9.995003 ATTTAGTTGGCTATCACAAATTTTCAA 57.005 25.926 0.00 0.00 0.00 2.69
3782 4033 9.474920 TTTAGTTGGCTATCACAAATTTTCAAG 57.525 29.630 0.00 0.00 0.00 3.02
3783 4034 7.054491 AGTTGGCTATCACAAATTTTCAAGT 57.946 32.000 0.00 0.00 0.00 3.16
3784 4035 7.147976 AGTTGGCTATCACAAATTTTCAAGTC 58.852 34.615 0.00 0.00 0.00 3.01
3785 4036 6.024552 TGGCTATCACAAATTTTCAAGTCC 57.975 37.500 0.00 0.00 0.00 3.85
3786 4037 5.538053 TGGCTATCACAAATTTTCAAGTCCA 59.462 36.000 0.00 0.00 0.00 4.02
3787 4038 6.211184 TGGCTATCACAAATTTTCAAGTCCAT 59.789 34.615 0.00 0.00 0.00 3.41
3788 4039 7.395772 TGGCTATCACAAATTTTCAAGTCCATA 59.604 33.333 0.00 0.00 0.00 2.74
3789 4040 8.416329 GGCTATCACAAATTTTCAAGTCCATAT 58.584 33.333 0.00 0.00 0.00 1.78
3790 4041 9.807649 GCTATCACAAATTTTCAAGTCCATATT 57.192 29.630 0.00 0.00 0.00 1.28
3793 4044 8.830201 TCACAAATTTTCAAGTCCATATTTGG 57.170 30.769 0.00 0.00 45.15 3.28
3808 4059 7.822161 CCATATTTGGATTATGACCTCAACA 57.178 36.000 0.00 0.00 46.92 3.33
3809 4060 7.879070 CCATATTTGGATTATGACCTCAACAG 58.121 38.462 0.00 0.00 46.92 3.16
3810 4061 7.720957 CCATATTTGGATTATGACCTCAACAGA 59.279 37.037 0.00 0.00 46.92 3.41
3811 4062 9.123902 CATATTTGGATTATGACCTCAACAGAA 57.876 33.333 0.00 0.00 0.00 3.02
3812 4063 9.699410 ATATTTGGATTATGACCTCAACAGAAA 57.301 29.630 0.00 0.00 0.00 2.52
3813 4064 6.817765 TTGGATTATGACCTCAACAGAAAC 57.182 37.500 0.00 0.00 0.00 2.78
3814 4065 5.875224 TGGATTATGACCTCAACAGAAACA 58.125 37.500 0.00 0.00 0.00 2.83
3815 4066 6.484288 TGGATTATGACCTCAACAGAAACAT 58.516 36.000 0.00 0.00 0.00 2.71
3816 4067 7.629157 TGGATTATGACCTCAACAGAAACATA 58.371 34.615 0.00 0.00 0.00 2.29
3817 4068 7.770433 TGGATTATGACCTCAACAGAAACATAG 59.230 37.037 0.00 0.00 0.00 2.23
3818 4069 7.987458 GGATTATGACCTCAACAGAAACATAGA 59.013 37.037 0.00 0.00 0.00 1.98
3819 4070 9.553064 GATTATGACCTCAACAGAAACATAGAT 57.447 33.333 0.00 0.00 0.00 1.98
3820 4071 9.911788 ATTATGACCTCAACAGAAACATAGATT 57.088 29.630 0.00 0.00 0.00 2.40
3855 4106 7.621796 AGAATTTCCATAGAACTTCTACCGTT 58.378 34.615 4.98 0.00 45.23 4.44
3860 4111 7.093322 TCCATAGAACTTCTACCGTTAGTTC 57.907 40.000 0.33 0.00 45.04 3.01
3865 4116 3.679389 ACTTCTACCGTTAGTTCTCCGA 58.321 45.455 0.00 0.00 0.00 4.55
3869 4120 4.012374 TCTACCGTTAGTTCTCCGACATT 58.988 43.478 0.00 0.00 0.00 2.71
3870 4121 5.185454 TCTACCGTTAGTTCTCCGACATTA 58.815 41.667 0.00 0.00 0.00 1.90
3871 4122 4.996788 ACCGTTAGTTCTCCGACATTAT 57.003 40.909 0.00 0.00 0.00 1.28
3872 4123 5.334724 ACCGTTAGTTCTCCGACATTATT 57.665 39.130 0.00 0.00 0.00 1.40
3873 4124 5.107133 ACCGTTAGTTCTCCGACATTATTG 58.893 41.667 0.00 0.00 0.00 1.90
3874 4125 4.025979 CCGTTAGTTCTCCGACATTATTGC 60.026 45.833 0.00 0.00 0.00 3.56
3875 4126 4.804139 CGTTAGTTCTCCGACATTATTGCT 59.196 41.667 0.00 0.00 0.00 3.91
3876 4127 5.276395 CGTTAGTTCTCCGACATTATTGCTG 60.276 44.000 0.00 0.00 0.00 4.41
3877 4128 4.207891 AGTTCTCCGACATTATTGCTGT 57.792 40.909 0.00 0.00 0.00 4.40
3902 4279 6.660521 TGGTGATTTCAAGCTGATATTTGACT 59.339 34.615 0.00 0.00 33.36 3.41
3904 4281 8.341173 GGTGATTTCAAGCTGATATTTGACTAG 58.659 37.037 0.00 0.00 33.36 2.57
3907 4284 5.357742 TCAAGCTGATATTTGACTAGGCA 57.642 39.130 0.00 0.00 0.00 4.75
3944 4585 3.632643 TGCAGGACATATTTGCAGAGA 57.367 42.857 0.00 0.00 42.41 3.10
3959 4600 3.386078 TGCAGAGACAATAGAGATGGGAC 59.614 47.826 0.00 0.00 0.00 4.46
3978 4619 6.597562 TGGGACTCAACAAGTAAAACATACT 58.402 36.000 0.00 0.00 38.74 2.12
3979 4620 7.737869 TGGGACTCAACAAGTAAAACATACTA 58.262 34.615 0.00 0.00 38.74 1.82
3980 4621 7.876068 TGGGACTCAACAAGTAAAACATACTAG 59.124 37.037 0.00 0.00 38.74 2.57
3981 4622 7.148457 GGGACTCAACAAGTAAAACATACTAGC 60.148 40.741 0.00 0.00 38.74 3.42
3982 4623 7.386848 GGACTCAACAAGTAAAACATACTAGCA 59.613 37.037 0.00 0.00 38.74 3.49
3983 4624 8.311650 ACTCAACAAGTAAAACATACTAGCAG 57.688 34.615 0.00 0.00 36.07 4.24
3984 4625 7.931948 ACTCAACAAGTAAAACATACTAGCAGT 59.068 33.333 0.00 0.00 36.07 4.40
3985 4626 9.419297 CTCAACAAGTAAAACATACTAGCAGTA 57.581 33.333 0.00 0.00 34.82 2.74
3986 4627 9.767228 TCAACAAGTAAAACATACTAGCAGTAA 57.233 29.630 0.00 0.00 33.89 2.24
3987 4628 9.807386 CAACAAGTAAAACATACTAGCAGTAAC 57.193 33.333 0.00 0.00 33.89 2.50
3988 4629 8.236084 ACAAGTAAAACATACTAGCAGTAACG 57.764 34.615 0.00 0.00 33.89 3.18
3991 4632 7.031975 AGTAAAACATACTAGCAGTAACGGAC 58.968 38.462 0.00 0.00 33.89 4.79
4005 4646 2.445155 GGACCCCAACCAGGCAAT 59.555 61.111 0.00 0.00 35.39 3.56
4067 4708 1.003233 AGAGTTTCTAGGCCAAACGGG 59.997 52.381 5.01 0.00 38.54 5.28
4148 4803 0.877071 CAAACTGCTCGGCTTCACAT 59.123 50.000 0.00 0.00 0.00 3.21
4171 4826 1.129917 AGGATCCTCAGTGCTCCATG 58.870 55.000 9.02 0.00 0.00 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 3.485877 GGCGATTTTGACATCTTCTTCCG 60.486 47.826 0.00 0.00 0.00 4.30
14 15 1.398390 GCGGCGATTTTGACATCTTCT 59.602 47.619 12.98 0.00 0.00 2.85
28 29 4.089239 TGGCTATTGGTGCGGCGA 62.089 61.111 12.98 0.00 0.00 5.54
32 33 0.534877 TATGGCTGGCTATTGGTGCG 60.535 55.000 2.00 0.00 0.00 5.34
65 66 3.127548 CAGATATTGGCAGTTGGTGTGTC 59.872 47.826 0.00 0.00 0.00 3.67
71 72 2.954318 CCCTTCAGATATTGGCAGTTGG 59.046 50.000 0.00 0.00 0.00 3.77
79 81 6.588719 TTTGTTGGTTCCCTTCAGATATTG 57.411 37.500 0.00 0.00 0.00 1.90
89 91 2.178984 TCCTTGGATTTGTTGGTTCCCT 59.821 45.455 0.00 0.00 0.00 4.20
101 103 2.224523 TGAGAGTTTGCGTCCTTGGATT 60.225 45.455 0.00 0.00 0.00 3.01
106 108 2.678190 GCCTATGAGAGTTTGCGTCCTT 60.678 50.000 0.00 0.00 0.00 3.36
112 114 2.293170 GAAGGGCCTATGAGAGTTTGC 58.707 52.381 6.41 0.00 0.00 3.68
123 125 1.461091 CGGCATCTACGAAGGGCCTA 61.461 60.000 6.41 0.00 39.82 3.93
126 128 2.100879 ATCCGGCATCTACGAAGGGC 62.101 60.000 0.00 0.00 0.00 5.19
131 133 0.952280 GTCTGATCCGGCATCTACGA 59.048 55.000 0.00 0.00 31.92 3.43
135 137 0.179100 CAACGTCTGATCCGGCATCT 60.179 55.000 0.00 0.00 31.92 2.90
150 152 1.352156 GCCTGCCTAACTCGACAACG 61.352 60.000 0.00 0.00 41.26 4.10
152 154 1.295423 GGCCTGCCTAACTCGACAA 59.705 57.895 0.00 0.00 0.00 3.18
153 155 2.978824 GGCCTGCCTAACTCGACA 59.021 61.111 0.00 0.00 0.00 4.35
174 178 6.650390 GGCATGTCATGTTGGAATAAAGTTTT 59.350 34.615 14.26 0.00 0.00 2.43
179 183 4.081752 GGTGGCATGTCATGTTGGAATAAA 60.082 41.667 14.26 0.00 0.00 1.40
193 197 0.108585 ACGAGTTCTTGGTGGCATGT 59.891 50.000 0.00 0.00 0.00 3.21
194 198 0.798776 GACGAGTTCTTGGTGGCATG 59.201 55.000 0.00 0.00 0.00 4.06
205 209 2.186076 CCTAGCAACATCGACGAGTTC 58.814 52.381 3.01 3.50 0.00 3.01
230 234 5.188751 TGTCCCATTTTCTTGTCCTTTGTTT 59.811 36.000 0.00 0.00 0.00 2.83
233 237 4.935352 TGTCCCATTTTCTTGTCCTTTG 57.065 40.909 0.00 0.00 0.00 2.77
262 270 1.672356 CAACGGCAAGAGGAGTGGG 60.672 63.158 0.00 0.00 0.00 4.61
278 286 3.998672 GTCCCGTGCCCTCGTCAA 61.999 66.667 0.00 0.00 0.00 3.18
280 288 3.998672 TTGTCCCGTGCCCTCGTC 61.999 66.667 0.00 0.00 0.00 4.20
291 299 0.673956 GCCCTTCTCTTCGTTGTCCC 60.674 60.000 0.00 0.00 0.00 4.46
292 300 0.321996 AGCCCTTCTCTTCGTTGTCC 59.678 55.000 0.00 0.00 0.00 4.02
298 306 0.038159 ACGTTGAGCCCTTCTCTTCG 60.038 55.000 0.00 0.00 42.38 3.79
310 318 2.738846 CAACCTCCATCAAGACGTTGAG 59.261 50.000 0.00 0.00 45.96 3.02
322 468 1.003580 CTGCCACTACACAACCTCCAT 59.996 52.381 0.00 0.00 0.00 3.41
335 481 1.139058 CTAAAGGGTATCGCTGCCACT 59.861 52.381 0.00 0.00 0.00 4.00
337 483 1.200519 ACTAAAGGGTATCGCTGCCA 58.799 50.000 0.00 0.00 0.00 4.92
375 521 2.379907 ACCACCAGAACAGGGATCAAAT 59.620 45.455 0.00 0.00 0.00 2.32
409 555 0.535102 CTCCACACACACCCTCCAAC 60.535 60.000 0.00 0.00 0.00 3.77
449 595 2.277591 AACACCGACCGAATCCCGA 61.278 57.895 0.00 0.00 41.76 5.14
526 684 1.136057 CGTCGTCGATGAAGTGAGTCA 60.136 52.381 9.35 0.00 39.71 3.41
545 703 1.875813 CGAACTAGAGCAGCAGCCG 60.876 63.158 0.00 0.00 43.56 5.52
548 706 0.805322 CCAGCGAACTAGAGCAGCAG 60.805 60.000 0.00 0.00 35.48 4.24
553 711 0.533032 AAGGACCAGCGAACTAGAGC 59.467 55.000 0.00 0.00 0.00 4.09
605 763 4.380550 GGAGCTGGGCAAACTTTGTTATAC 60.381 45.833 0.00 0.00 0.00 1.47
608 766 1.960689 GGAGCTGGGCAAACTTTGTTA 59.039 47.619 0.00 0.00 0.00 2.41
622 780 2.186384 CTTCCCTCGCTGGAGCTG 59.814 66.667 0.00 0.00 39.06 4.24
631 789 0.319383 CCATCATCGCTCTTCCCTCG 60.319 60.000 0.00 0.00 0.00 4.63
677 835 4.097437 GGGCCACCTAGCAATAACTAAAAC 59.903 45.833 4.39 0.00 0.00 2.43
685 843 0.478072 CCATGGGCCACCTAGCAATA 59.522 55.000 9.28 0.00 37.76 1.90
698 856 2.595750 TTTACAACCAGGTCCATGGG 57.404 50.000 13.02 0.00 45.25 4.00
741 899 9.725019 TCCATTCATAATCAATCATGGTAGTAC 57.275 33.333 0.00 0.00 34.05 2.73
747 905 9.990360 TTTCAATCCATTCATAATCAATCATGG 57.010 29.630 0.00 0.00 33.71 3.66
784 942 7.762588 TGTCGGGGAAATTCTATTTTTGTTA 57.237 32.000 0.00 0.00 0.00 2.41
792 950 3.197116 ACTCGTTGTCGGGGAAATTCTAT 59.803 43.478 0.00 0.00 42.51 1.98
808 995 0.393820 TCGGCCCAGTTTAACTCGTT 59.606 50.000 0.00 0.00 0.00 3.85
826 1013 4.806640 TGGGCCAAAATGATCTTCTTTC 57.193 40.909 2.13 0.00 0.00 2.62
874 1061 0.548682 AGAAGGCCCATCCACTCTGT 60.549 55.000 0.00 0.00 37.29 3.41
878 1065 0.622665 CAAGAGAAGGCCCATCCACT 59.377 55.000 0.00 0.00 37.29 4.00
936 1126 2.087646 GAAGAGGGGTTTGCTTAGCAG 58.912 52.381 7.08 0.00 40.61 4.24
1785 1977 1.479730 AGAAAGGGATCGAACCGGTAC 59.520 52.381 8.00 0.00 0.00 3.34
2077 2269 4.758692 CCCCCAATCGATCGACAG 57.241 61.111 22.06 15.42 0.00 3.51
2172 2364 0.394352 CGCCATTTTGCCTACTCCCT 60.394 55.000 0.00 0.00 0.00 4.20
2255 2447 0.548031 ATCTCCACCGCAATCACCAT 59.452 50.000 0.00 0.00 0.00 3.55
2265 2457 2.292267 CCTCCAAAATCATCTCCACCG 58.708 52.381 0.00 0.00 0.00 4.94
2310 2502 2.602676 CCAATCACCCCCGTCCTGT 61.603 63.158 0.00 0.00 0.00 4.00
2376 2568 4.985413 TGTAATTACCGATTCGAACTCGT 58.015 39.130 20.59 11.63 40.80 4.18
2461 2653 7.902032 ACGTGTGTTAATAATACAAGGAATCG 58.098 34.615 16.68 11.62 36.59 3.34
2607 2799 6.862209 TGCAAAAGAACACTACAATTCACTT 58.138 32.000 0.00 0.00 0.00 3.16
2632 2824 6.932400 TCTTTCTCATTTCACTTACGCCTTTA 59.068 34.615 0.00 0.00 0.00 1.85
2784 2983 5.805728 TCCAATCCTCTTCAGAAACTAACC 58.194 41.667 0.00 0.00 0.00 2.85
2794 2993 2.359376 TTCCCCTCCAATCCTCTTCA 57.641 50.000 0.00 0.00 0.00 3.02
2845 3044 1.264749 TTGGTGAGGATCGAGGGGTG 61.265 60.000 0.00 0.00 38.61 4.61
2876 3075 1.136252 CACACAGTTACGCACATGAGC 60.136 52.381 4.89 4.89 0.00 4.26
2886 3085 7.593644 GGATTCATAAACAAACCACACAGTTAC 59.406 37.037 0.00 0.00 0.00 2.50
3005 3205 2.083167 AAATTGCGCCAGACCAATTG 57.917 45.000 4.18 0.00 39.88 2.32
3048 3248 4.201980 ACACGAATGATCATGCAGGATTTG 60.202 41.667 16.04 7.07 0.00 2.32
3072 3272 6.707440 ACACATGGTAGAAATTTTGTGTCA 57.293 33.333 15.13 2.62 42.81 3.58
3089 3289 6.757897 ACCACAAGACCAATATAACACATG 57.242 37.500 0.00 0.00 0.00 3.21
3124 3324 7.002879 ACTGCCTGCTAATTAGAATTGATGAT 58.997 34.615 16.85 0.00 0.00 2.45
3125 3325 6.359804 ACTGCCTGCTAATTAGAATTGATGA 58.640 36.000 16.85 0.00 0.00 2.92
3126 3326 6.630444 ACTGCCTGCTAATTAGAATTGATG 57.370 37.500 16.85 3.04 0.00 3.07
3161 3361 2.275134 TCATTGCTTGCTTGTCCTCA 57.725 45.000 0.00 0.00 0.00 3.86
3167 3367 5.660629 TGTTTCATTTCATTGCTTGCTTG 57.339 34.783 0.00 0.00 0.00 4.01
3168 3368 5.119588 CGATGTTTCATTTCATTGCTTGCTT 59.880 36.000 0.00 0.00 0.00 3.91
3169 3369 4.624024 CGATGTTTCATTTCATTGCTTGCT 59.376 37.500 0.00 0.00 0.00 3.91
3170 3370 4.722908 GCGATGTTTCATTTCATTGCTTGC 60.723 41.667 9.31 0.00 43.85 4.01
3171 3371 4.877942 GCGATGTTTCATTTCATTGCTTG 58.122 39.130 9.31 0.00 43.85 4.01
3202 3402 1.816863 GATATCTCGGCCGGCTTCCA 61.817 60.000 28.56 8.89 0.00 3.53
3211 3411 3.531538 TGAAGGTTGTTGATATCTCGGC 58.468 45.455 3.98 0.00 0.00 5.54
3259 3459 3.875727 AGAATGACGATGCCAAGATTGAG 59.124 43.478 0.00 0.00 0.00 3.02
3290 3490 4.388485 TGAGCTCAGAGTATTTTGTTGCA 58.612 39.130 13.74 0.00 0.00 4.08
3294 3539 9.624373 ATGATAAATGAGCTCAGAGTATTTTGT 57.376 29.630 22.96 13.95 0.00 2.83
3312 3557 6.549433 ACATTGGCTGGTTTGATGATAAAT 57.451 33.333 0.00 0.00 0.00 1.40
3326 3575 3.845775 CGAACAAAATCGTACATTGGCTG 59.154 43.478 0.00 0.00 38.01 4.85
3341 3590 2.515057 ACCACAGCGGCGAACAAA 60.515 55.556 12.98 0.00 39.03 2.83
3350 3599 4.742201 AGCTACGGCACCACAGCG 62.742 66.667 0.00 0.00 41.70 5.18
3359 3608 1.325355 TCCCAGTATACAGCTACGGC 58.675 55.000 5.50 0.00 39.06 5.68
3364 3613 7.798710 ATACATTACATCCCAGTATACAGCT 57.201 36.000 5.50 0.00 0.00 4.24
3420 3670 4.945246 AGATTCGGCAGTAAACGATACAT 58.055 39.130 0.00 0.00 39.06 2.29
3436 3686 1.742831 TCGCATTTGGGGAAAGATTCG 59.257 47.619 0.00 0.00 35.23 3.34
3454 3704 0.795085 CTGAGCCAAAGCAGACTTCG 59.205 55.000 0.00 0.00 43.56 3.79
3458 3708 2.677337 GAGAATCTGAGCCAAAGCAGAC 59.323 50.000 0.00 0.00 43.26 3.51
3501 3752 6.017400 AGAACGATGATGCAAAGATTTTGT 57.983 33.333 0.00 0.00 0.00 2.83
3503 3754 6.583806 GTGAAGAACGATGATGCAAAGATTTT 59.416 34.615 0.00 0.00 0.00 1.82
3505 3756 5.634896 GTGAAGAACGATGATGCAAAGATT 58.365 37.500 0.00 0.00 0.00 2.40
3506 3757 5.227238 GTGAAGAACGATGATGCAAAGAT 57.773 39.130 0.00 0.00 0.00 2.40
3507 3758 4.668576 GTGAAGAACGATGATGCAAAGA 57.331 40.909 0.00 0.00 0.00 2.52
3529 3780 0.109179 TGGCAAGTTCATCGCATTGC 60.109 50.000 0.00 0.00 45.64 3.56
3530 3781 1.904144 CTGGCAAGTTCATCGCATTG 58.096 50.000 0.00 0.00 0.00 2.82
3531 3782 0.171903 GCTGGCAAGTTCATCGCATT 59.828 50.000 0.00 0.00 0.00 3.56
3532 3783 1.805254 GCTGGCAAGTTCATCGCAT 59.195 52.632 0.00 0.00 0.00 4.73
3533 3784 2.679934 CGCTGGCAAGTTCATCGCA 61.680 57.895 0.00 0.00 0.00 5.10
3534 3785 2.099062 CGCTGGCAAGTTCATCGC 59.901 61.111 0.00 0.00 0.00 4.58
3535 3786 1.291184 TGACGCTGGCAAGTTCATCG 61.291 55.000 0.00 0.00 0.00 3.84
3536 3787 0.445436 CTGACGCTGGCAAGTTCATC 59.555 55.000 0.00 0.00 0.00 2.92
3537 3788 0.035317 TCTGACGCTGGCAAGTTCAT 59.965 50.000 0.00 0.00 0.00 2.57
3538 3789 0.179059 TTCTGACGCTGGCAAGTTCA 60.179 50.000 0.00 0.00 0.00 3.18
3539 3790 1.160137 ATTCTGACGCTGGCAAGTTC 58.840 50.000 0.00 0.00 0.00 3.01
3540 3791 2.076863 GTATTCTGACGCTGGCAAGTT 58.923 47.619 0.00 0.00 0.00 2.66
3541 3792 1.276421 AGTATTCTGACGCTGGCAAGT 59.724 47.619 0.00 0.00 0.00 3.16
3542 3793 2.015736 AGTATTCTGACGCTGGCAAG 57.984 50.000 0.00 0.00 0.00 4.01
3543 3794 3.819564 ATAGTATTCTGACGCTGGCAA 57.180 42.857 0.00 0.00 0.00 4.52
3544 3795 4.809673 CATATAGTATTCTGACGCTGGCA 58.190 43.478 0.00 0.00 0.00 4.92
3545 3796 3.614616 GCATATAGTATTCTGACGCTGGC 59.385 47.826 0.00 0.00 0.00 4.85
3546 3797 5.065704 AGCATATAGTATTCTGACGCTGG 57.934 43.478 0.00 0.00 0.00 4.85
3547 3798 6.385843 AGAAGCATATAGTATTCTGACGCTG 58.614 40.000 0.00 0.00 31.00 5.18
3548 3799 6.582677 AGAAGCATATAGTATTCTGACGCT 57.417 37.500 0.00 0.00 31.00 5.07
3549 3800 7.644986 AAAGAAGCATATAGTATTCTGACGC 57.355 36.000 0.00 0.00 32.50 5.19
3567 3818 6.507023 ACACTGGCTTGTTTGATAAAAGAAG 58.493 36.000 7.89 7.89 36.47 2.85
3568 3819 6.463995 ACACTGGCTTGTTTGATAAAAGAA 57.536 33.333 0.00 0.00 0.00 2.52
3569 3820 6.293190 CGTACACTGGCTTGTTTGATAAAAGA 60.293 38.462 0.00 0.00 0.00 2.52
3570 3821 5.851177 CGTACACTGGCTTGTTTGATAAAAG 59.149 40.000 0.00 0.00 0.00 2.27
3571 3822 5.527951 TCGTACACTGGCTTGTTTGATAAAA 59.472 36.000 0.00 0.00 0.00 1.52
3572 3823 5.057819 TCGTACACTGGCTTGTTTGATAAA 58.942 37.500 0.00 0.00 0.00 1.40
3573 3824 4.633175 TCGTACACTGGCTTGTTTGATAA 58.367 39.130 0.00 0.00 0.00 1.75
3574 3825 4.260139 TCGTACACTGGCTTGTTTGATA 57.740 40.909 0.00 0.00 0.00 2.15
3575 3826 3.120321 TCGTACACTGGCTTGTTTGAT 57.880 42.857 0.00 0.00 0.00 2.57
3576 3827 2.605837 TCGTACACTGGCTTGTTTGA 57.394 45.000 0.00 0.00 0.00 2.69
3577 3828 3.896648 AATCGTACACTGGCTTGTTTG 57.103 42.857 0.00 0.00 0.00 2.93
3578 3829 3.630312 ACAAATCGTACACTGGCTTGTTT 59.370 39.130 0.00 0.00 0.00 2.83
3579 3830 3.211045 ACAAATCGTACACTGGCTTGTT 58.789 40.909 0.00 0.00 0.00 2.83
3580 3831 2.846193 ACAAATCGTACACTGGCTTGT 58.154 42.857 0.00 0.00 0.00 3.16
3581 3832 3.249799 TGAACAAATCGTACACTGGCTTG 59.750 43.478 0.00 0.00 0.00 4.01
3582 3833 3.472652 TGAACAAATCGTACACTGGCTT 58.527 40.909 0.00 0.00 0.00 4.35
3583 3834 3.120321 TGAACAAATCGTACACTGGCT 57.880 42.857 0.00 0.00 0.00 4.75
3584 3835 4.158384 CAATGAACAAATCGTACACTGGC 58.842 43.478 0.00 0.00 0.00 4.85
3585 3836 4.083324 AGCAATGAACAAATCGTACACTGG 60.083 41.667 0.00 0.00 0.00 4.00
3586 3837 4.847757 CAGCAATGAACAAATCGTACACTG 59.152 41.667 0.00 0.00 0.00 3.66
3587 3838 4.083324 CCAGCAATGAACAAATCGTACACT 60.083 41.667 0.00 0.00 0.00 3.55
3588 3839 4.083537 TCCAGCAATGAACAAATCGTACAC 60.084 41.667 0.00 0.00 0.00 2.90
3589 3840 4.068599 TCCAGCAATGAACAAATCGTACA 58.931 39.130 0.00 0.00 0.00 2.90
3590 3841 4.678509 TCCAGCAATGAACAAATCGTAC 57.321 40.909 0.00 0.00 0.00 3.67
3591 3842 4.699735 ACATCCAGCAATGAACAAATCGTA 59.300 37.500 1.32 0.00 0.00 3.43
3592 3843 3.507233 ACATCCAGCAATGAACAAATCGT 59.493 39.130 1.32 0.00 0.00 3.73
3593 3844 4.100707 ACATCCAGCAATGAACAAATCG 57.899 40.909 1.32 0.00 0.00 3.34
3594 3845 7.859377 CAGTATACATCCAGCAATGAACAAATC 59.141 37.037 5.50 0.00 0.00 2.17
3595 3846 7.201848 CCAGTATACATCCAGCAATGAACAAAT 60.202 37.037 5.50 0.00 0.00 2.32
3596 3847 6.095300 CCAGTATACATCCAGCAATGAACAAA 59.905 38.462 5.50 0.00 0.00 2.83
3597 3848 5.589855 CCAGTATACATCCAGCAATGAACAA 59.410 40.000 5.50 0.00 0.00 2.83
3598 3849 5.125356 CCAGTATACATCCAGCAATGAACA 58.875 41.667 5.50 0.00 0.00 3.18
3599 3850 5.126067 ACCAGTATACATCCAGCAATGAAC 58.874 41.667 5.50 0.00 0.00 3.18
3600 3851 5.372343 ACCAGTATACATCCAGCAATGAA 57.628 39.130 5.50 0.00 0.00 2.57
3601 3852 5.372343 AACCAGTATACATCCAGCAATGA 57.628 39.130 5.50 0.00 0.00 2.57
3602 3853 6.291377 AGTAACCAGTATACATCCAGCAATG 58.709 40.000 5.50 0.00 0.00 2.82
3603 3854 6.500589 AGTAACCAGTATACATCCAGCAAT 57.499 37.500 5.50 0.00 0.00 3.56
3604 3855 5.950544 AGTAACCAGTATACATCCAGCAA 57.049 39.130 5.50 0.00 0.00 3.91
3605 3856 6.837048 TCTTAGTAACCAGTATACATCCAGCA 59.163 38.462 5.50 0.00 0.00 4.41
3606 3857 7.286215 TCTTAGTAACCAGTATACATCCAGC 57.714 40.000 5.50 0.00 0.00 4.85
3607 3858 8.861086 ACATCTTAGTAACCAGTATACATCCAG 58.139 37.037 5.50 0.00 0.00 3.86
3608 3859 8.777578 ACATCTTAGTAACCAGTATACATCCA 57.222 34.615 5.50 0.00 0.00 3.41
3614 3865 9.494271 CGGTAGTACATCTTAGTAACCAGTATA 57.506 37.037 2.06 0.00 29.33 1.47
3615 3866 7.040823 GCGGTAGTACATCTTAGTAACCAGTAT 60.041 40.741 2.06 0.00 29.33 2.12
3616 3867 6.260936 GCGGTAGTACATCTTAGTAACCAGTA 59.739 42.308 2.06 0.00 29.33 2.74
3617 3868 5.067023 GCGGTAGTACATCTTAGTAACCAGT 59.933 44.000 2.06 0.00 29.33 4.00
3618 3869 5.298777 AGCGGTAGTACATCTTAGTAACCAG 59.701 44.000 2.06 0.00 29.33 4.00
3619 3870 5.066893 CAGCGGTAGTACATCTTAGTAACCA 59.933 44.000 2.06 0.00 29.33 3.67
3620 3871 5.067023 ACAGCGGTAGTACATCTTAGTAACC 59.933 44.000 2.06 0.00 0.00 2.85
3621 3872 6.129053 ACAGCGGTAGTACATCTTAGTAAC 57.871 41.667 2.06 0.00 0.00 2.50
3622 3873 7.864108 TTACAGCGGTAGTACATCTTAGTAA 57.136 36.000 2.06 1.36 0.00 2.24
3623 3874 7.554118 AGTTTACAGCGGTAGTACATCTTAGTA 59.446 37.037 2.06 0.00 0.00 1.82
3624 3875 6.376581 AGTTTACAGCGGTAGTACATCTTAGT 59.623 38.462 2.06 0.00 0.00 2.24
3625 3876 6.793349 AGTTTACAGCGGTAGTACATCTTAG 58.207 40.000 2.06 0.00 0.00 2.18
3626 3877 6.764308 AGTTTACAGCGGTAGTACATCTTA 57.236 37.500 2.06 0.00 0.00 2.10
3627 3878 5.656213 AGTTTACAGCGGTAGTACATCTT 57.344 39.130 2.06 0.00 0.00 2.40
3628 3879 6.764308 TTAGTTTACAGCGGTAGTACATCT 57.236 37.500 2.06 0.00 0.00 2.90
3629 3880 8.131100 TGTATTAGTTTACAGCGGTAGTACATC 58.869 37.037 2.06 0.00 0.00 3.06
3630 3881 7.999679 TGTATTAGTTTACAGCGGTAGTACAT 58.000 34.615 2.06 3.42 0.00 2.29
3631 3882 7.389803 TGTATTAGTTTACAGCGGTAGTACA 57.610 36.000 2.06 2.42 0.00 2.90
3632 3883 8.184192 TCTTGTATTAGTTTACAGCGGTAGTAC 58.816 37.037 0.00 0.60 33.81 2.73
3633 3884 8.279970 TCTTGTATTAGTTTACAGCGGTAGTA 57.720 34.615 0.00 0.00 33.81 1.82
3634 3885 7.161773 TCTTGTATTAGTTTACAGCGGTAGT 57.838 36.000 0.00 0.00 33.81 2.73
3635 3886 7.543172 TGTTCTTGTATTAGTTTACAGCGGTAG 59.457 37.037 0.00 0.00 33.81 3.18
3636 3887 7.329226 GTGTTCTTGTATTAGTTTACAGCGGTA 59.671 37.037 0.00 0.00 33.81 4.02
3637 3888 6.146673 GTGTTCTTGTATTAGTTTACAGCGGT 59.853 38.462 0.00 0.00 33.81 5.68
3638 3889 6.146510 TGTGTTCTTGTATTAGTTTACAGCGG 59.853 38.462 0.00 0.00 33.81 5.52
3639 3890 7.112528 TGTGTTCTTGTATTAGTTTACAGCG 57.887 36.000 0.00 0.00 33.81 5.18
3640 3891 7.172703 ACCTGTGTTCTTGTATTAGTTTACAGC 59.827 37.037 0.00 0.00 33.81 4.40
3641 3892 8.495949 CACCTGTGTTCTTGTATTAGTTTACAG 58.504 37.037 0.00 0.00 33.81 2.74
3642 3893 7.988599 ACACCTGTGTTCTTGTATTAGTTTACA 59.011 33.333 0.00 0.00 41.83 2.41
3643 3894 8.374327 ACACCTGTGTTCTTGTATTAGTTTAC 57.626 34.615 0.00 0.00 41.83 2.01
3644 3895 9.480053 GTACACCTGTGTTCTTGTATTAGTTTA 57.520 33.333 8.41 0.00 41.83 2.01
3645 3896 8.208903 AGTACACCTGTGTTCTTGTATTAGTTT 58.791 33.333 8.41 0.00 41.83 2.66
3646 3897 7.732996 AGTACACCTGTGTTCTTGTATTAGTT 58.267 34.615 8.41 0.00 41.83 2.24
3647 3898 7.299246 AGTACACCTGTGTTCTTGTATTAGT 57.701 36.000 8.41 0.00 41.83 2.24
3648 3899 8.603242 AAAGTACACCTGTGTTCTTGTATTAG 57.397 34.615 18.86 0.00 45.96 1.73
3649 3900 8.832521 CAAAAGTACACCTGTGTTCTTGTATTA 58.167 33.333 18.86 0.00 45.96 0.98
3650 3901 7.338449 ACAAAAGTACACCTGTGTTCTTGTATT 59.662 33.333 18.86 9.90 45.96 1.89
3651 3902 6.826741 ACAAAAGTACACCTGTGTTCTTGTAT 59.173 34.615 18.86 4.45 45.96 2.29
3652 3903 6.092944 CACAAAAGTACACCTGTGTTCTTGTA 59.907 38.462 18.86 0.00 45.96 2.41
3653 3904 5.007682 ACAAAAGTACACCTGTGTTCTTGT 58.992 37.500 18.86 12.95 45.96 3.16
3654 3905 5.123186 TCACAAAAGTACACCTGTGTTCTTG 59.877 40.000 18.86 12.67 45.96 3.02
3656 3907 4.839121 TCACAAAAGTACACCTGTGTTCT 58.161 39.130 8.41 5.99 41.83 3.01
3657 3908 5.527582 AGATCACAAAAGTACACCTGTGTTC 59.472 40.000 8.41 16.44 41.83 3.18
3658 3909 5.437060 AGATCACAAAAGTACACCTGTGTT 58.563 37.500 8.41 10.83 41.83 3.32
3659 3910 5.036117 AGATCACAAAAGTACACCTGTGT 57.964 39.130 16.21 8.17 46.87 3.72
3660 3911 7.352739 GTTTAGATCACAAAAGTACACCTGTG 58.647 38.462 12.53 12.53 40.42 3.66
3661 3912 6.202188 CGTTTAGATCACAAAAGTACACCTGT 59.798 38.462 0.00 0.00 0.00 4.00
3662 3913 6.347402 CCGTTTAGATCACAAAAGTACACCTG 60.347 42.308 0.00 0.00 0.00 4.00
3663 3914 5.699458 CCGTTTAGATCACAAAAGTACACCT 59.301 40.000 0.00 0.00 0.00 4.00
3664 3915 5.467735 ACCGTTTAGATCACAAAAGTACACC 59.532 40.000 0.00 0.00 0.00 4.16
3665 3916 6.423001 AGACCGTTTAGATCACAAAAGTACAC 59.577 38.462 0.00 0.00 0.00 2.90
3666 3917 6.518493 AGACCGTTTAGATCACAAAAGTACA 58.482 36.000 0.00 0.00 0.00 2.90
3667 3918 7.042254 ACAAGACCGTTTAGATCACAAAAGTAC 60.042 37.037 0.00 0.00 0.00 2.73
3668 3919 6.987992 ACAAGACCGTTTAGATCACAAAAGTA 59.012 34.615 0.00 0.00 0.00 2.24
3669 3920 5.820947 ACAAGACCGTTTAGATCACAAAAGT 59.179 36.000 0.00 0.00 0.00 2.66
3670 3921 6.300354 ACAAGACCGTTTAGATCACAAAAG 57.700 37.500 0.00 0.00 0.00 2.27
3671 3922 6.687081 AACAAGACCGTTTAGATCACAAAA 57.313 33.333 0.00 0.00 0.00 2.44
3672 3923 6.687081 AAACAAGACCGTTTAGATCACAAA 57.313 33.333 0.00 0.00 37.33 2.83
3673 3924 6.540914 AGAAAACAAGACCGTTTAGATCACAA 59.459 34.615 0.00 0.00 38.13 3.33
3674 3925 6.053005 AGAAAACAAGACCGTTTAGATCACA 58.947 36.000 0.00 0.00 38.13 3.58
3675 3926 6.541111 AGAAAACAAGACCGTTTAGATCAC 57.459 37.500 0.00 0.00 38.13 3.06
3676 3927 7.562454 AAAGAAAACAAGACCGTTTAGATCA 57.438 32.000 0.00 0.00 38.13 2.92
3677 3928 8.553696 TGTAAAGAAAACAAGACCGTTTAGATC 58.446 33.333 0.00 0.00 38.13 2.75
3678 3929 8.441312 TGTAAAGAAAACAAGACCGTTTAGAT 57.559 30.769 0.00 0.00 38.13 1.98
3679 3930 7.765360 TCTGTAAAGAAAACAAGACCGTTTAGA 59.235 33.333 0.00 0.00 38.13 2.10
3680 3931 7.912383 TCTGTAAAGAAAACAAGACCGTTTAG 58.088 34.615 0.00 0.00 38.13 1.85
3681 3932 7.846644 TCTGTAAAGAAAACAAGACCGTTTA 57.153 32.000 0.00 0.00 38.13 2.01
3682 3933 6.746745 TCTGTAAAGAAAACAAGACCGTTT 57.253 33.333 0.00 0.00 40.79 3.60
3683 3934 6.746745 TTCTGTAAAGAAAACAAGACCGTT 57.253 33.333 0.00 0.00 0.00 4.44
3684 3935 6.937436 ATTCTGTAAAGAAAACAAGACCGT 57.063 33.333 0.00 0.00 0.00 4.83
3685 3936 7.414436 TCAATTCTGTAAAGAAAACAAGACCG 58.586 34.615 0.00 0.00 0.00 4.79
3686 3937 9.020813 GTTCAATTCTGTAAAGAAAACAAGACC 57.979 33.333 0.00 0.00 0.00 3.85
3687 3938 9.788960 AGTTCAATTCTGTAAAGAAAACAAGAC 57.211 29.630 0.00 0.00 0.00 3.01
3688 3939 9.787532 CAGTTCAATTCTGTAAAGAAAACAAGA 57.212 29.630 0.00 0.00 0.00 3.02
3689 3940 8.534778 GCAGTTCAATTCTGTAAAGAAAACAAG 58.465 33.333 0.00 0.00 35.60 3.16
3690 3941 8.031864 TGCAGTTCAATTCTGTAAAGAAAACAA 58.968 29.630 0.00 0.00 35.60 2.83
3691 3942 7.542890 TGCAGTTCAATTCTGTAAAGAAAACA 58.457 30.769 0.00 0.00 35.60 2.83
3692 3943 7.985634 TGCAGTTCAATTCTGTAAAGAAAAC 57.014 32.000 0.00 0.24 35.60 2.43
3693 3944 8.250332 AGTTGCAGTTCAATTCTGTAAAGAAAA 58.750 29.630 0.00 0.00 38.69 2.29
3694 3945 7.771183 AGTTGCAGTTCAATTCTGTAAAGAAA 58.229 30.769 0.00 0.00 38.69 2.52
3695 3946 7.333528 AGTTGCAGTTCAATTCTGTAAAGAA 57.666 32.000 0.00 0.00 38.69 2.52
3696 3947 6.942532 AGTTGCAGTTCAATTCTGTAAAGA 57.057 33.333 0.00 0.00 38.69 2.52
3697 3948 7.992180 AAAGTTGCAGTTCAATTCTGTAAAG 57.008 32.000 0.00 0.00 38.69 1.85
3698 3949 7.491048 GGAAAAGTTGCAGTTCAATTCTGTAAA 59.509 33.333 0.00 0.00 38.69 2.01
3699 3950 6.978080 GGAAAAGTTGCAGTTCAATTCTGTAA 59.022 34.615 0.00 0.00 36.99 2.41
3700 3951 6.460953 GGGAAAAGTTGCAGTTCAATTCTGTA 60.461 38.462 0.00 0.00 36.99 2.74
3701 3952 5.351458 GGAAAAGTTGCAGTTCAATTCTGT 58.649 37.500 0.00 0.00 36.99 3.41
3702 3953 4.746611 GGGAAAAGTTGCAGTTCAATTCTG 59.253 41.667 0.00 0.00 36.99 3.02
3703 3954 4.405358 TGGGAAAAGTTGCAGTTCAATTCT 59.595 37.500 0.00 0.00 36.99 2.40
3704 3955 4.692228 TGGGAAAAGTTGCAGTTCAATTC 58.308 39.130 0.00 0.00 36.99 2.17
3705 3956 4.751767 TGGGAAAAGTTGCAGTTCAATT 57.248 36.364 0.00 0.00 36.99 2.32
3706 3957 4.751767 TTGGGAAAAGTTGCAGTTCAAT 57.248 36.364 0.00 0.00 36.99 2.57
3707 3958 4.543590 TTTGGGAAAAGTTGCAGTTCAA 57.456 36.364 0.00 0.00 0.00 2.69
3708 3959 4.543590 TTTTGGGAAAAGTTGCAGTTCA 57.456 36.364 0.00 0.00 0.00 3.18
3709 3960 4.875536 ACATTTTGGGAAAAGTTGCAGTTC 59.124 37.500 0.00 0.00 33.22 3.01
3710 3961 4.635324 CACATTTTGGGAAAAGTTGCAGTT 59.365 37.500 0.00 0.00 33.22 3.16
3711 3962 4.081198 TCACATTTTGGGAAAAGTTGCAGT 60.081 37.500 0.00 0.00 33.22 4.40
3712 3963 4.440880 TCACATTTTGGGAAAAGTTGCAG 58.559 39.130 0.00 0.00 33.22 4.41
3713 3964 4.478206 TCACATTTTGGGAAAAGTTGCA 57.522 36.364 0.00 0.00 33.22 4.08
3714 3965 5.809719 TTTCACATTTTGGGAAAAGTTGC 57.190 34.783 2.55 0.00 45.76 4.17
3721 3972 7.551035 CAAAACAGATTTCACATTTTGGGAA 57.449 32.000 0.00 0.00 38.14 3.97
3725 3976 6.258287 TGAGCCAAAACAGATTTCACATTTTG 59.742 34.615 0.00 0.00 39.08 2.44
3726 3977 6.347696 TGAGCCAAAACAGATTTCACATTTT 58.652 32.000 0.00 0.00 0.00 1.82
3727 3978 5.916318 TGAGCCAAAACAGATTTCACATTT 58.084 33.333 0.00 0.00 0.00 2.32
3728 3979 5.534207 TGAGCCAAAACAGATTTCACATT 57.466 34.783 0.00 0.00 0.00 2.71
3729 3980 5.534207 TTGAGCCAAAACAGATTTCACAT 57.466 34.783 0.00 0.00 0.00 3.21
3730 3981 4.998671 TTGAGCCAAAACAGATTTCACA 57.001 36.364 0.00 0.00 0.00 3.58
3731 3982 6.849588 AATTTGAGCCAAAACAGATTTCAC 57.150 33.333 4.76 0.00 36.90 3.18
3732 3983 9.558396 AAATAATTTGAGCCAAAACAGATTTCA 57.442 25.926 4.76 0.00 36.90 2.69
3737 3988 9.474920 CAACTAAATAATTTGAGCCAAAACAGA 57.525 29.630 4.76 0.00 36.90 3.41
3738 3989 8.711457 CCAACTAAATAATTTGAGCCAAAACAG 58.289 33.333 4.76 0.89 36.90 3.16
3739 3990 7.172361 GCCAACTAAATAATTTGAGCCAAAACA 59.828 33.333 4.76 0.00 36.90 2.83
3740 3991 7.387673 AGCCAACTAAATAATTTGAGCCAAAAC 59.612 33.333 4.76 0.00 36.90 2.43
3741 3992 7.449247 AGCCAACTAAATAATTTGAGCCAAAA 58.551 30.769 4.76 0.00 36.90 2.44
3742 3993 7.003402 AGCCAACTAAATAATTTGAGCCAAA 57.997 32.000 3.33 3.33 37.75 3.28
3743 3994 6.603940 AGCCAACTAAATAATTTGAGCCAA 57.396 33.333 0.00 0.00 0.00 4.52
3744 3995 7.559533 TGATAGCCAACTAAATAATTTGAGCCA 59.440 33.333 0.00 0.00 30.45 4.75
3745 3996 7.862873 GTGATAGCCAACTAAATAATTTGAGCC 59.137 37.037 0.00 0.00 30.45 4.70
3746 3997 8.405531 TGTGATAGCCAACTAAATAATTTGAGC 58.594 33.333 0.00 0.00 30.45 4.26
3755 4006 9.995003 TTGAAAATTTGTGATAGCCAACTAAAT 57.005 25.926 0.00 0.00 30.45 1.40
3756 4007 9.474920 CTTGAAAATTTGTGATAGCCAACTAAA 57.525 29.630 0.00 0.00 30.45 1.85
3757 4008 8.637986 ACTTGAAAATTTGTGATAGCCAACTAA 58.362 29.630 0.00 0.00 30.45 2.24
3758 4009 8.177119 ACTTGAAAATTTGTGATAGCCAACTA 57.823 30.769 0.00 0.00 0.00 2.24
3759 4010 7.054491 ACTTGAAAATTTGTGATAGCCAACT 57.946 32.000 0.00 0.00 0.00 3.16
3760 4011 6.366061 GGACTTGAAAATTTGTGATAGCCAAC 59.634 38.462 0.00 0.00 0.00 3.77
3761 4012 6.041409 TGGACTTGAAAATTTGTGATAGCCAA 59.959 34.615 0.00 0.00 0.00 4.52
3762 4013 5.538053 TGGACTTGAAAATTTGTGATAGCCA 59.462 36.000 0.00 0.00 0.00 4.75
3763 4014 6.024552 TGGACTTGAAAATTTGTGATAGCC 57.975 37.500 0.00 0.00 0.00 3.93
3764 4015 9.807649 AATATGGACTTGAAAATTTGTGATAGC 57.192 29.630 0.00 0.00 0.00 2.97
3785 4036 8.681486 TCTGTTGAGGTCATAATCCAAATATG 57.319 34.615 0.00 0.00 33.06 1.78
3786 4037 9.699410 TTTCTGTTGAGGTCATAATCCAAATAT 57.301 29.630 0.00 0.00 0.00 1.28
3787 4038 8.956426 GTTTCTGTTGAGGTCATAATCCAAATA 58.044 33.333 0.00 0.00 0.00 1.40
3788 4039 7.451255 TGTTTCTGTTGAGGTCATAATCCAAAT 59.549 33.333 0.00 0.00 0.00 2.32
3789 4040 6.775142 TGTTTCTGTTGAGGTCATAATCCAAA 59.225 34.615 0.00 0.00 0.00 3.28
3790 4041 6.303054 TGTTTCTGTTGAGGTCATAATCCAA 58.697 36.000 0.00 0.00 0.00 3.53
3791 4042 5.875224 TGTTTCTGTTGAGGTCATAATCCA 58.125 37.500 0.00 0.00 0.00 3.41
3792 4043 7.987458 TCTATGTTTCTGTTGAGGTCATAATCC 59.013 37.037 0.00 0.00 0.00 3.01
3793 4044 8.948631 TCTATGTTTCTGTTGAGGTCATAATC 57.051 34.615 0.00 0.00 0.00 1.75
3794 4045 9.911788 AATCTATGTTTCTGTTGAGGTCATAAT 57.088 29.630 0.00 0.00 0.00 1.28
3795 4046 9.739276 AAATCTATGTTTCTGTTGAGGTCATAA 57.261 29.630 0.00 0.00 0.00 1.90
3796 4047 9.166173 CAAATCTATGTTTCTGTTGAGGTCATA 57.834 33.333 0.00 0.00 0.00 2.15
3797 4048 7.667219 ACAAATCTATGTTTCTGTTGAGGTCAT 59.333 33.333 0.00 0.00 0.00 3.06
3798 4049 6.998074 ACAAATCTATGTTTCTGTTGAGGTCA 59.002 34.615 0.00 0.00 0.00 4.02
3799 4050 7.440523 ACAAATCTATGTTTCTGTTGAGGTC 57.559 36.000 0.00 0.00 0.00 3.85
3800 4051 7.823745 AACAAATCTATGTTTCTGTTGAGGT 57.176 32.000 0.00 0.00 40.52 3.85
3803 4054 9.868277 ACAAAAACAAATCTATGTTTCTGTTGA 57.132 25.926 16.48 0.00 46.75 3.18
3833 4084 8.075761 ACTAACGGTAGAAGTTCTATGGAAAT 57.924 34.615 15.99 4.09 30.76 2.17
3852 4103 4.804139 AGCAATAATGTCGGAGAACTAACG 59.196 41.667 0.00 0.00 39.69 3.18
3853 4104 5.581085 ACAGCAATAATGTCGGAGAACTAAC 59.419 40.000 0.00 0.00 39.69 2.34
3855 4106 5.109210 CACAGCAATAATGTCGGAGAACTA 58.891 41.667 0.00 0.00 39.69 2.24
3860 4111 2.352651 CACCACAGCAATAATGTCGGAG 59.647 50.000 0.00 0.00 0.00 4.63
3863 4114 4.621068 AATCACCACAGCAATAATGTCG 57.379 40.909 0.00 0.00 0.00 4.35
3865 4116 5.981088 TGAAATCACCACAGCAATAATGT 57.019 34.783 0.00 0.00 0.00 2.71
3869 4120 4.081406 AGCTTGAAATCACCACAGCAATA 58.919 39.130 7.37 0.00 0.00 1.90
3870 4121 2.895404 AGCTTGAAATCACCACAGCAAT 59.105 40.909 7.37 0.00 0.00 3.56
3871 4122 2.034939 CAGCTTGAAATCACCACAGCAA 59.965 45.455 7.37 0.00 0.00 3.91
3872 4123 1.610038 CAGCTTGAAATCACCACAGCA 59.390 47.619 7.37 0.00 0.00 4.41
3873 4124 1.881973 TCAGCTTGAAATCACCACAGC 59.118 47.619 0.00 0.00 0.00 4.40
3874 4125 6.446781 AATATCAGCTTGAAATCACCACAG 57.553 37.500 0.00 0.00 0.00 3.66
3875 4126 6.433716 TCAAATATCAGCTTGAAATCACCACA 59.566 34.615 0.00 0.00 0.00 4.17
3876 4127 6.749118 GTCAAATATCAGCTTGAAATCACCAC 59.251 38.462 0.00 0.00 33.52 4.16
3877 4128 6.660521 AGTCAAATATCAGCTTGAAATCACCA 59.339 34.615 0.00 0.00 33.52 4.17
3922 4563 3.691118 TCTCTGCAAATATGTCCTGCAAC 59.309 43.478 0.00 0.00 44.94 4.17
3923 4564 3.691118 GTCTCTGCAAATATGTCCTGCAA 59.309 43.478 0.00 0.00 44.94 4.08
3924 4565 3.273434 GTCTCTGCAAATATGTCCTGCA 58.727 45.455 0.00 0.00 43.54 4.41
3925 4566 3.273434 TGTCTCTGCAAATATGTCCTGC 58.727 45.455 0.00 0.00 36.60 4.85
3926 4567 6.988580 TCTATTGTCTCTGCAAATATGTCCTG 59.011 38.462 0.00 0.00 31.63 3.86
3927 4568 7.070447 TCTCTATTGTCTCTGCAAATATGTCCT 59.930 37.037 0.00 0.00 31.63 3.85
3928 4569 7.212976 TCTCTATTGTCTCTGCAAATATGTCC 58.787 38.462 0.00 0.00 31.63 4.02
3929 4570 8.710551 CATCTCTATTGTCTCTGCAAATATGTC 58.289 37.037 0.00 0.00 31.63 3.06
3944 4585 5.249393 ACTTGTTGAGTCCCATCTCTATTGT 59.751 40.000 0.00 0.00 31.20 2.71
3959 4600 8.311650 ACTGCTAGTATGTTTTACTTGTTGAG 57.688 34.615 0.00 0.00 0.00 3.02
3978 4619 0.609662 GTTGGGGTCCGTTACTGCTA 59.390 55.000 0.00 0.00 0.00 3.49
3979 4620 1.373812 GTTGGGGTCCGTTACTGCT 59.626 57.895 0.00 0.00 0.00 4.24
3980 4621 1.673337 GGTTGGGGTCCGTTACTGC 60.673 63.158 0.00 0.00 0.00 4.40
3981 4622 0.321298 CTGGTTGGGGTCCGTTACTG 60.321 60.000 0.00 0.00 0.00 2.74
3982 4623 1.486145 CCTGGTTGGGGTCCGTTACT 61.486 60.000 0.00 0.00 0.00 2.24
3983 4624 1.002990 CCTGGTTGGGGTCCGTTAC 60.003 63.158 0.00 0.00 0.00 2.50
3984 4625 2.897762 GCCTGGTTGGGGTCCGTTA 61.898 63.158 0.00 0.00 36.00 3.18
3985 4626 4.280019 GCCTGGTTGGGGTCCGTT 62.280 66.667 0.00 0.00 36.00 4.44
3987 4628 3.583882 ATTGCCTGGTTGGGGTCCG 62.584 63.158 0.00 0.00 36.00 4.79
3988 4629 1.682344 GATTGCCTGGTTGGGGTCC 60.682 63.158 0.00 0.00 36.00 4.46
3991 4632 1.044790 GGATGATTGCCTGGTTGGGG 61.045 60.000 0.00 0.00 36.00 4.96
4067 4708 3.455327 GGACTATAGAACTCGTTTGGCC 58.545 50.000 6.78 0.00 0.00 5.36
4148 4803 1.407936 GAGCACTGAGGATCCTGCTA 58.592 55.000 22.02 4.28 45.11 3.49


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.