Multiple sequence alignment - TraesCS6B01G422800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G422800 chr6B 100.000 2754 0 0 1 2754 693021885 693024638 0.000000e+00 5086
1 TraesCS6B01G422800 chr6B 97.541 732 18 0 2023 2754 171460241 171459510 0.000000e+00 1253
2 TraesCS6B01G422800 chr6B 86.076 158 21 1 645 801 9021628 9021785 4.720000e-38 169
3 TraesCS6B01G422800 chr2B 98.214 728 12 1 2027 2754 548619285 548618559 0.000000e+00 1271
4 TraesCS6B01G422800 chr2B 97.802 728 16 0 2027 2754 411544730 411544003 0.000000e+00 1256
5 TraesCS6B01G422800 chr2B 97.802 728 16 0 2027 2754 656969882 656969155 0.000000e+00 1256
6 TraesCS6B01G422800 chr7B 98.077 728 14 0 2027 2754 153569719 153568992 0.000000e+00 1267
7 TraesCS6B01G422800 chr4B 97.805 729 16 0 2024 2752 647650706 647651434 0.000000e+00 1258
8 TraesCS6B01G422800 chr5B 97.802 728 16 0 2027 2754 699403177 699402450 0.000000e+00 1256
9 TraesCS6B01G422800 chr5B 97.394 729 19 0 2026 2754 326898185 326898913 0.000000e+00 1242
10 TraesCS6B01G422800 chr3B 97.662 727 17 0 2028 2754 49371959 49372685 0.000000e+00 1249
11 TraesCS6B01G422800 chr3B 89.088 559 51 9 1 553 292019552 292020106 0.000000e+00 686
12 TraesCS6B01G422800 chr6D 89.555 584 44 10 1179 1750 455728165 455728743 0.000000e+00 725
13 TraesCS6B01G422800 chr6D 82.109 313 29 14 943 1239 455727978 455728279 2.740000e-60 243
14 TraesCS6B01G422800 chr6D 80.808 297 34 11 531 813 413984264 413984551 7.730000e-51 211
15 TraesCS6B01G422800 chr3D 87.905 587 53 12 1 574 105464570 105465151 0.000000e+00 675
16 TraesCS6B01G422800 chr5D 88.710 558 52 9 1 548 9590601 9591157 0.000000e+00 671
17 TraesCS6B01G422800 chr5D 88.587 552 48 12 8 548 465704745 465705292 0.000000e+00 656
18 TraesCS6B01G422800 chr5D 80.511 313 46 10 442 744 514156930 514156623 2.760000e-55 226
19 TraesCS6B01G422800 chr2D 89.031 547 48 8 8 548 644985686 644986226 0.000000e+00 667
20 TraesCS6B01G422800 chr7D 88.330 557 53 9 1 548 125840331 125840884 0.000000e+00 658
21 TraesCS6B01G422800 chr4D 88.225 552 57 6 1 548 8881889 8881342 0.000000e+00 652
22 TraesCS6B01G422800 chr4D 81.337 643 74 30 201 805 483986561 483987195 5.330000e-132 481
23 TraesCS6B01G422800 chr4D 82.533 229 30 7 578 803 434096643 434096864 2.800000e-45 193
24 TraesCS6B01G422800 chr4D 82.791 215 33 4 589 802 82495130 82494919 3.620000e-44 189
25 TraesCS6B01G422800 chr3A 88.151 557 52 12 1 548 516889475 516888924 0.000000e+00 651
26 TraesCS6B01G422800 chr2A 87.943 564 49 14 1 553 84004282 84004837 0.000000e+00 647
27 TraesCS6B01G422800 chr4A 80.911 461 64 14 360 803 464113687 464114140 2.630000e-90 342
28 TraesCS6B01G422800 chr6A 84.470 264 23 9 1772 2021 602520318 602520577 7.620000e-61 244
29 TraesCS6B01G422800 chr6A 80.786 229 34 9 579 803 182500070 182499848 1.310000e-38 171
30 TraesCS6B01G422800 chr1B 84.793 217 22 6 601 806 323959423 323959639 1.000000e-49 207
31 TraesCS6B01G422800 chr1A 80.303 198 36 3 607 804 548291764 548291570 2.210000e-31 147


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G422800 chr6B 693021885 693024638 2753 False 5086 5086 100.000 1 2754 1 chr6B.!!$F2 2753
1 TraesCS6B01G422800 chr6B 171459510 171460241 731 True 1253 1253 97.541 2023 2754 1 chr6B.!!$R1 731
2 TraesCS6B01G422800 chr2B 548618559 548619285 726 True 1271 1271 98.214 2027 2754 1 chr2B.!!$R2 727
3 TraesCS6B01G422800 chr2B 411544003 411544730 727 True 1256 1256 97.802 2027 2754 1 chr2B.!!$R1 727
4 TraesCS6B01G422800 chr2B 656969155 656969882 727 True 1256 1256 97.802 2027 2754 1 chr2B.!!$R3 727
5 TraesCS6B01G422800 chr7B 153568992 153569719 727 True 1267 1267 98.077 2027 2754 1 chr7B.!!$R1 727
6 TraesCS6B01G422800 chr4B 647650706 647651434 728 False 1258 1258 97.805 2024 2752 1 chr4B.!!$F1 728
7 TraesCS6B01G422800 chr5B 699402450 699403177 727 True 1256 1256 97.802 2027 2754 1 chr5B.!!$R1 727
8 TraesCS6B01G422800 chr5B 326898185 326898913 728 False 1242 1242 97.394 2026 2754 1 chr5B.!!$F1 728
9 TraesCS6B01G422800 chr3B 49371959 49372685 726 False 1249 1249 97.662 2028 2754 1 chr3B.!!$F1 726
10 TraesCS6B01G422800 chr3B 292019552 292020106 554 False 686 686 89.088 1 553 1 chr3B.!!$F2 552
11 TraesCS6B01G422800 chr6D 455727978 455728743 765 False 484 725 85.832 943 1750 2 chr6D.!!$F2 807
12 TraesCS6B01G422800 chr3D 105464570 105465151 581 False 675 675 87.905 1 574 1 chr3D.!!$F1 573
13 TraesCS6B01G422800 chr5D 9590601 9591157 556 False 671 671 88.710 1 548 1 chr5D.!!$F1 547
14 TraesCS6B01G422800 chr5D 465704745 465705292 547 False 656 656 88.587 8 548 1 chr5D.!!$F2 540
15 TraesCS6B01G422800 chr2D 644985686 644986226 540 False 667 667 89.031 8 548 1 chr2D.!!$F1 540
16 TraesCS6B01G422800 chr7D 125840331 125840884 553 False 658 658 88.330 1 548 1 chr7D.!!$F1 547
17 TraesCS6B01G422800 chr4D 8881342 8881889 547 True 652 652 88.225 1 548 1 chr4D.!!$R1 547
18 TraesCS6B01G422800 chr4D 483986561 483987195 634 False 481 481 81.337 201 805 1 chr4D.!!$F2 604
19 TraesCS6B01G422800 chr3A 516888924 516889475 551 True 651 651 88.151 1 548 1 chr3A.!!$R1 547
20 TraesCS6B01G422800 chr2A 84004282 84004837 555 False 647 647 87.943 1 553 1 chr2A.!!$F1 552

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
856 927 0.17576 GAGGTGAGACTAATGCGGCA 59.824 55.0 4.58 4.58 0.0 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1931 2021 0.03392 GACCGGTTCCCGTGTAAAGT 59.966 55.0 9.42 0.0 46.8 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 22 2.860009 ACCCGGGAGTTTTCTCTTTTC 58.140 47.619 32.02 0.00 45.52 2.29
38 40 7.701078 TCTCTTTTCTCGTAGATCCGTTTATTG 59.299 37.037 0.00 0.00 33.89 1.90
43 45 8.712285 TTCTCGTAGATCCGTTTATTGAAAAT 57.288 30.769 0.00 0.00 33.89 1.82
99 101 2.416547 ACTGCTTTCGTCATTGGATTCG 59.583 45.455 0.00 0.00 0.00 3.34
232 238 1.291272 GAAAGAGGTACGCCCGTGT 59.709 57.895 3.22 0.00 38.74 4.49
254 260 3.253921 TCTCTGACGAAATCACAACCGTA 59.746 43.478 0.00 0.00 35.22 4.02
374 424 2.800544 CAAAACCGTGACTCTCGTGAAT 59.199 45.455 0.24 0.00 0.00 2.57
447 503 0.584396 CTCGCAAAAGCACAACCGTA 59.416 50.000 0.00 0.00 0.00 4.02
612 681 7.960195 TCAAAATTTTCTTTTTGGTCGAAAAGC 59.040 29.630 15.18 0.00 43.54 3.51
615 684 7.930513 ATTTTCTTTTTGGTCGAAAAGCTAG 57.069 32.000 15.18 0.00 43.17 3.42
625 694 1.203994 CGAAAAGCTAGGGAAGACCGA 59.796 52.381 0.00 0.00 46.96 4.69
633 702 3.623510 GCTAGGGAAGACCGATGAAAAAG 59.376 47.826 0.00 0.00 46.96 2.27
639 708 4.681483 GGAAGACCGATGAAAAAGCAAAAG 59.319 41.667 0.00 0.00 0.00 2.27
642 711 4.099419 AGACCGATGAAAAAGCAAAAGGTT 59.901 37.500 0.00 0.00 0.00 3.50
681 752 2.197577 CCAAAAACACGTGCGGAAAAT 58.802 42.857 17.22 0.00 0.00 1.82
685 756 5.419530 CAAAAACACGTGCGGAAAATTAAG 58.580 37.500 17.22 0.00 0.00 1.85
690 761 5.525199 ACACGTGCGGAAAATTAAGAAAAT 58.475 33.333 17.22 0.00 0.00 1.82
715 786 2.047274 CGAAGGAAGCGCCCAGAA 60.047 61.111 2.29 0.00 37.37 3.02
739 810 2.031919 ACGTGGCGAATGGCTGAA 59.968 55.556 0.00 0.00 42.94 3.02
756 827 2.134098 GAAAGCGTGCAAAACAGCGC 62.134 55.000 8.89 8.89 44.09 5.92
773 844 2.743195 GCTGATCGTTGCGAGACTT 58.257 52.632 0.00 0.00 39.91 3.01
775 846 1.734047 GCTGATCGTTGCGAGACTTCT 60.734 52.381 0.00 0.00 39.91 2.85
782 853 2.755650 GTTGCGAGACTTCTGAAGGAA 58.244 47.619 20.61 0.00 0.00 3.36
787 858 2.608261 CGAGACTTCTGAAGGAACGCTT 60.608 50.000 20.61 0.00 0.00 4.68
793 864 5.063880 ACTTCTGAAGGAACGCTTGTTAAT 58.936 37.500 20.61 0.00 35.50 1.40
805 876 4.091509 ACGCTTGTTAATTAGTTGCTCTCG 59.908 41.667 0.00 0.00 0.00 4.04
806 877 4.091509 CGCTTGTTAATTAGTTGCTCTCGT 59.908 41.667 0.00 0.00 0.00 4.18
807 878 5.389516 CGCTTGTTAATTAGTTGCTCTCGTT 60.390 40.000 0.00 0.00 0.00 3.85
808 879 6.016111 GCTTGTTAATTAGTTGCTCTCGTTC 58.984 40.000 0.00 0.00 0.00 3.95
809 880 6.347402 GCTTGTTAATTAGTTGCTCTCGTTCA 60.347 38.462 0.00 0.00 0.00 3.18
810 881 7.485418 TTGTTAATTAGTTGCTCTCGTTCAA 57.515 32.000 0.00 0.00 0.00 2.69
811 882 7.485418 TGTTAATTAGTTGCTCTCGTTCAAA 57.515 32.000 0.00 0.00 0.00 2.69
812 883 7.349711 TGTTAATTAGTTGCTCTCGTTCAAAC 58.650 34.615 0.00 0.00 0.00 2.93
813 884 7.225931 TGTTAATTAGTTGCTCTCGTTCAAACT 59.774 33.333 0.00 0.00 0.00 2.66
814 885 5.597813 ATTAGTTGCTCTCGTTCAAACTG 57.402 39.130 0.00 0.00 0.00 3.16
815 886 2.213499 AGTTGCTCTCGTTCAAACTGG 58.787 47.619 0.00 0.00 0.00 4.00
816 887 1.940613 GTTGCTCTCGTTCAAACTGGT 59.059 47.619 0.00 0.00 0.00 4.00
817 888 1.865865 TGCTCTCGTTCAAACTGGTC 58.134 50.000 0.00 0.00 0.00 4.02
818 889 0.784778 GCTCTCGTTCAAACTGGTCG 59.215 55.000 0.00 0.00 0.00 4.79
819 890 0.784778 CTCTCGTTCAAACTGGTCGC 59.215 55.000 0.00 0.00 0.00 5.19
820 891 0.937699 TCTCGTTCAAACTGGTCGCG 60.938 55.000 0.00 0.00 0.00 5.87
821 892 1.213094 CTCGTTCAAACTGGTCGCGT 61.213 55.000 5.77 0.00 0.00 6.01
822 893 0.806884 TCGTTCAAACTGGTCGCGTT 60.807 50.000 5.77 0.00 0.00 4.84
823 894 0.653323 CGTTCAAACTGGTCGCGTTG 60.653 55.000 5.77 1.71 0.00 4.10
824 895 0.928451 GTTCAAACTGGTCGCGTTGC 60.928 55.000 5.77 0.00 0.00 4.17
825 896 2.051345 CAAACTGGTCGCGTTGCC 60.051 61.111 5.77 8.11 0.00 4.52
826 897 3.284449 AAACTGGTCGCGTTGCCC 61.284 61.111 5.77 2.81 0.00 5.36
829 900 4.077184 CTGGTCGCGTTGCCCCTA 62.077 66.667 5.77 0.00 0.00 3.53
830 901 4.077184 TGGTCGCGTTGCCCCTAG 62.077 66.667 5.77 0.00 0.00 3.02
831 902 4.078516 GGTCGCGTTGCCCCTAGT 62.079 66.667 5.77 0.00 0.00 2.57
832 903 2.047560 GTCGCGTTGCCCCTAGTT 60.048 61.111 5.77 0.00 0.00 2.24
833 904 2.098831 GTCGCGTTGCCCCTAGTTC 61.099 63.158 5.77 0.00 0.00 3.01
834 905 2.818274 CGCGTTGCCCCTAGTTCC 60.818 66.667 0.00 0.00 0.00 3.62
835 906 2.818274 GCGTTGCCCCTAGTTCCG 60.818 66.667 0.00 0.00 0.00 4.30
836 907 2.818274 CGTTGCCCCTAGTTCCGC 60.818 66.667 0.00 0.00 0.00 5.54
837 908 2.818274 GTTGCCCCTAGTTCCGCG 60.818 66.667 0.00 0.00 0.00 6.46
838 909 2.998480 TTGCCCCTAGTTCCGCGA 60.998 61.111 8.23 0.00 0.00 5.87
839 910 3.014085 TTGCCCCTAGTTCCGCGAG 62.014 63.158 8.23 0.00 0.00 5.03
852 923 2.582959 CGCGAGGTGAGACTAATGC 58.417 57.895 0.00 0.00 0.00 3.56
853 924 1.202973 CGCGAGGTGAGACTAATGCG 61.203 60.000 0.00 0.00 38.28 4.73
854 925 0.872021 GCGAGGTGAGACTAATGCGG 60.872 60.000 0.00 0.00 0.00 5.69
855 926 0.872021 CGAGGTGAGACTAATGCGGC 60.872 60.000 0.00 0.00 0.00 6.53
856 927 0.175760 GAGGTGAGACTAATGCGGCA 59.824 55.000 4.58 4.58 0.00 5.69
857 928 0.833287 AGGTGAGACTAATGCGGCAT 59.167 50.000 10.23 10.23 0.00 4.40
858 929 0.940126 GGTGAGACTAATGCGGCATG 59.060 55.000 17.43 7.51 0.00 4.06
859 930 0.940126 GTGAGACTAATGCGGCATGG 59.060 55.000 17.43 14.49 0.00 3.66
860 931 0.179048 TGAGACTAATGCGGCATGGG 60.179 55.000 17.43 14.14 0.00 4.00
861 932 1.510480 GAGACTAATGCGGCATGGGC 61.510 60.000 17.43 14.43 40.13 5.36
878 949 4.388499 CCTAGCCCAACGGTGCGT 62.388 66.667 0.00 0.00 43.97 5.24
879 950 3.118454 CTAGCCCAACGGTGCGTG 61.118 66.667 0.00 0.00 39.99 5.34
880 951 4.690719 TAGCCCAACGGTGCGTGG 62.691 66.667 0.00 0.00 39.99 4.94
893 964 2.860293 CGTGGCGCTCGTTCATTT 59.140 55.556 7.64 0.00 0.00 2.32
894 965 1.206578 CGTGGCGCTCGTTCATTTT 59.793 52.632 7.64 0.00 0.00 1.82
895 966 0.440758 CGTGGCGCTCGTTCATTTTA 59.559 50.000 7.64 0.00 0.00 1.52
896 967 1.062002 CGTGGCGCTCGTTCATTTTAT 59.938 47.619 7.64 0.00 0.00 1.40
897 968 2.475519 CGTGGCGCTCGTTCATTTTATT 60.476 45.455 7.64 0.00 0.00 1.40
898 969 3.098636 GTGGCGCTCGTTCATTTTATTC 58.901 45.455 7.64 0.00 0.00 1.75
899 970 2.096819 TGGCGCTCGTTCATTTTATTCC 59.903 45.455 7.64 0.00 0.00 3.01
900 971 2.354821 GGCGCTCGTTCATTTTATTCCT 59.645 45.455 7.64 0.00 0.00 3.36
901 972 3.181500 GGCGCTCGTTCATTTTATTCCTT 60.181 43.478 7.64 0.00 0.00 3.36
902 973 3.786048 GCGCTCGTTCATTTTATTCCTTG 59.214 43.478 0.00 0.00 0.00 3.61
903 974 4.671766 GCGCTCGTTCATTTTATTCCTTGT 60.672 41.667 0.00 0.00 0.00 3.16
904 975 5.390613 CGCTCGTTCATTTTATTCCTTGTT 58.609 37.500 0.00 0.00 0.00 2.83
905 976 5.856455 CGCTCGTTCATTTTATTCCTTGTTT 59.144 36.000 0.00 0.00 0.00 2.83
906 977 6.362283 CGCTCGTTCATTTTATTCCTTGTTTT 59.638 34.615 0.00 0.00 0.00 2.43
907 978 7.096230 CGCTCGTTCATTTTATTCCTTGTTTTT 60.096 33.333 0.00 0.00 0.00 1.94
925 996 3.320673 TTTTCCGCTTTGTGTTTTGGT 57.679 38.095 0.00 0.00 0.00 3.67
926 997 3.320673 TTTCCGCTTTGTGTTTTGGTT 57.679 38.095 0.00 0.00 0.00 3.67
927 998 3.320673 TTCCGCTTTGTGTTTTGGTTT 57.679 38.095 0.00 0.00 0.00 3.27
928 999 3.320673 TCCGCTTTGTGTTTTGGTTTT 57.679 38.095 0.00 0.00 0.00 2.43
929 1000 3.665190 TCCGCTTTGTGTTTTGGTTTTT 58.335 36.364 0.00 0.00 0.00 1.94
930 1001 3.433615 TCCGCTTTGTGTTTTGGTTTTTG 59.566 39.130 0.00 0.00 0.00 2.44
931 1002 3.159785 CGCTTTGTGTTTTGGTTTTTGC 58.840 40.909 0.00 0.00 0.00 3.68
932 1003 3.159785 GCTTTGTGTTTTGGTTTTTGCG 58.840 40.909 0.00 0.00 0.00 4.85
933 1004 3.364465 GCTTTGTGTTTTGGTTTTTGCGT 60.364 39.130 0.00 0.00 0.00 5.24
934 1005 4.390501 CTTTGTGTTTTGGTTTTTGCGTC 58.609 39.130 0.00 0.00 0.00 5.19
935 1006 3.026630 TGTGTTTTGGTTTTTGCGTCA 57.973 38.095 0.00 0.00 0.00 4.35
936 1007 2.989840 TGTGTTTTGGTTTTTGCGTCAG 59.010 40.909 0.00 0.00 0.00 3.51
937 1008 2.990514 GTGTTTTGGTTTTTGCGTCAGT 59.009 40.909 0.00 0.00 0.00 3.41
938 1009 3.430556 GTGTTTTGGTTTTTGCGTCAGTT 59.569 39.130 0.00 0.00 0.00 3.16
939 1010 4.058817 TGTTTTGGTTTTTGCGTCAGTTT 58.941 34.783 0.00 0.00 0.00 2.66
940 1011 4.084328 TGTTTTGGTTTTTGCGTCAGTTTG 60.084 37.500 0.00 0.00 0.00 2.93
941 1012 2.285827 TGGTTTTTGCGTCAGTTTGG 57.714 45.000 0.00 0.00 0.00 3.28
947 1018 1.999071 TTGCGTCAGTTTGGTGTGGC 61.999 55.000 0.00 0.00 0.00 5.01
993 1064 0.315568 ATTATCTGCGGCTCTCGTCC 59.684 55.000 0.00 0.00 41.72 4.79
998 1069 0.596083 CTGCGGCTCTCGTCCATTAG 60.596 60.000 0.00 0.00 41.72 1.73
1008 1082 1.913419 TCGTCCATTAGCCCCTTCTTT 59.087 47.619 0.00 0.00 0.00 2.52
1010 1084 2.092914 CGTCCATTAGCCCCTTCTTTCT 60.093 50.000 0.00 0.00 0.00 2.52
1012 1086 3.696548 GTCCATTAGCCCCTTCTTTCTTG 59.303 47.826 0.00 0.00 0.00 3.02
1018 1092 1.807142 GCCCCTTCTTTCTTGTCGAAG 59.193 52.381 0.00 0.00 35.19 3.79
1019 1093 1.807142 CCCCTTCTTTCTTGTCGAAGC 59.193 52.381 0.00 0.00 34.33 3.86
1023 1097 2.631160 TCTTTCTTGTCGAAGCCCAA 57.369 45.000 0.00 0.00 32.21 4.12
1024 1098 2.218603 TCTTTCTTGTCGAAGCCCAAC 58.781 47.619 0.00 0.00 32.21 3.77
1025 1099 1.946768 CTTTCTTGTCGAAGCCCAACA 59.053 47.619 0.00 0.00 32.21 3.33
1026 1100 1.593196 TTCTTGTCGAAGCCCAACAG 58.407 50.000 0.00 0.00 0.00 3.16
1027 1101 0.884704 TCTTGTCGAAGCCCAACAGC 60.885 55.000 0.00 0.00 0.00 4.40
1028 1102 1.856265 CTTGTCGAAGCCCAACAGCC 61.856 60.000 0.00 0.00 0.00 4.85
1029 1103 3.423154 GTCGAAGCCCAACAGCCG 61.423 66.667 0.00 0.00 0.00 5.52
1038 1112 2.186903 CAACAGCCGCGGTATCCT 59.813 61.111 28.70 12.59 0.00 3.24
1054 1128 4.201930 GGTATCCTCGCAATACGGATCTAG 60.202 50.000 0.00 0.00 43.89 2.43
1056 1130 3.075148 TCCTCGCAATACGGATCTAGAG 58.925 50.000 0.00 0.00 43.89 2.43
1057 1131 3.075148 CCTCGCAATACGGATCTAGAGA 58.925 50.000 0.00 0.00 43.89 3.10
1074 1151 6.647569 TCTAGAGATCGTTTATTTCGAGACG 58.352 40.000 0.00 0.00 40.57 4.18
1078 1155 4.334759 AGATCGTTTATTTCGAGACGGAGA 59.665 41.667 0.00 0.00 40.57 3.71
1082 1159 1.688772 TATTTCGAGACGGAGAGGGG 58.311 55.000 0.00 0.00 0.00 4.79
1096 1173 2.768769 GGGGGAGGTCAGGGCTAC 60.769 72.222 0.00 0.00 0.00 3.58
1105 1186 2.768344 CAGGGCTACATCGGGGGT 60.768 66.667 0.00 0.00 0.00 4.95
1145 1226 3.120385 CGCAAGACGATGCAGGCA 61.120 61.111 11.75 0.00 46.76 4.75
1172 1253 4.626081 GTGGCTGCCGGTGACTGT 62.626 66.667 14.98 0.00 0.00 3.55
1173 1254 3.872603 TGGCTGCCGGTGACTGTT 61.873 61.111 14.98 0.00 0.00 3.16
1174 1255 3.050275 GGCTGCCGGTGACTGTTC 61.050 66.667 1.35 0.00 0.00 3.18
1175 1256 2.280797 GCTGCCGGTGACTGTTCA 60.281 61.111 1.90 0.00 0.00 3.18
1187 1268 4.327982 TGACTGTTCACTCAAGAGGAAG 57.672 45.455 1.73 0.00 29.12 3.46
1188 1269 3.960755 TGACTGTTCACTCAAGAGGAAGA 59.039 43.478 1.73 1.13 29.12 2.87
1189 1270 4.405680 TGACTGTTCACTCAAGAGGAAGAA 59.594 41.667 1.73 0.71 29.12 2.52
1190 1271 4.954875 ACTGTTCACTCAAGAGGAAGAAG 58.045 43.478 1.73 5.97 29.12 2.85
1191 1272 4.202305 ACTGTTCACTCAAGAGGAAGAAGG 60.202 45.833 1.73 2.74 29.12 3.46
1192 1273 3.070748 GTTCACTCAAGAGGAAGAAGGC 58.929 50.000 1.73 0.00 0.00 4.35
1193 1274 1.273606 TCACTCAAGAGGAAGAAGGCG 59.726 52.381 1.73 0.00 0.00 5.52
1194 1275 1.273606 CACTCAAGAGGAAGAAGGCGA 59.726 52.381 1.73 0.00 0.00 5.54
1195 1276 1.548269 ACTCAAGAGGAAGAAGGCGAG 59.452 52.381 1.73 0.00 0.00 5.03
1196 1277 0.247736 TCAAGAGGAAGAAGGCGAGC 59.752 55.000 0.00 0.00 0.00 5.03
1197 1278 0.248843 CAAGAGGAAGAAGGCGAGCT 59.751 55.000 0.00 0.00 0.00 4.09
1198 1279 0.534873 AAGAGGAAGAAGGCGAGCTC 59.465 55.000 2.73 2.73 0.00 4.09
1199 1280 1.226831 GAGGAAGAAGGCGAGCTCG 60.227 63.158 31.37 31.37 43.27 5.03
1200 1281 1.939769 GAGGAAGAAGGCGAGCTCGT 61.940 60.000 34.46 17.65 42.22 4.18
1201 1282 1.517475 GGAAGAAGGCGAGCTCGTC 60.517 63.158 32.52 32.52 45.56 4.20
1290 1371 0.243907 CGTCAAGAGGAAGAAGCCGA 59.756 55.000 0.00 0.00 0.00 5.54
1322 1403 2.740121 GGGAGAGATCCCGGAGAAG 58.260 63.158 0.73 0.00 40.59 2.85
1323 1404 0.186386 GGGAGAGATCCCGGAGAAGA 59.814 60.000 0.73 0.00 40.59 2.87
1344 1425 1.523758 GAAGAAGGTGTTCATGCCGT 58.476 50.000 0.00 0.00 34.82 5.68
1346 1427 1.238439 AGAAGGTGTTCATGCCGTTG 58.762 50.000 0.00 0.00 34.82 4.10
1485 1567 1.037579 GGCAAACCCCTACCAGATGC 61.038 60.000 0.00 0.00 0.00 3.91
1537 1619 1.251251 ACCAACTACTACCGCGAGTT 58.749 50.000 8.23 5.90 33.71 3.01
1538 1620 1.200948 ACCAACTACTACCGCGAGTTC 59.799 52.381 8.23 0.00 31.04 3.01
1603 1685 0.752658 CAGGGCATCATCGACCAGTA 59.247 55.000 0.00 0.00 0.00 2.74
1634 1716 1.170919 GCTACGCGGAGGAGGATACA 61.171 60.000 22.20 0.00 41.41 2.29
1637 1719 0.395311 ACGCGGAGGAGGATACAGAA 60.395 55.000 12.47 0.00 41.41 3.02
1643 1725 2.359531 GGAGGAGGATACAGAAGTCACG 59.640 54.545 0.00 0.00 41.41 4.35
1649 1731 2.223294 GGATACAGAAGTCACGGACGAG 60.223 54.545 0.00 0.00 37.67 4.18
1652 1734 0.169230 CAGAAGTCACGGACGAGGAG 59.831 60.000 0.00 0.00 37.67 3.69
1655 1737 0.961358 AAGTCACGGACGAGGAGGAG 60.961 60.000 0.00 0.00 37.67 3.69
1658 1740 2.115911 CACGGACGAGGAGGAGGAG 61.116 68.421 0.00 0.00 0.00 3.69
1668 1750 2.436292 AGGAGGAGGACGACGACG 60.436 66.667 5.58 5.58 45.75 5.12
1670 1752 2.462782 GGAGGAGGACGACGACGAG 61.463 68.421 15.32 0.00 42.66 4.18
1671 1753 2.436292 AGGAGGACGACGACGAGG 60.436 66.667 15.32 0.00 42.66 4.63
1674 1756 2.436292 AGGACGACGACGAGGAGG 60.436 66.667 15.32 0.00 42.66 4.30
1675 1757 2.435586 GGACGACGACGAGGAGGA 60.436 66.667 15.32 0.00 42.66 3.71
1677 1759 1.741032 GACGACGACGAGGAGGACT 60.741 63.158 15.32 0.00 42.66 3.85
1678 1760 0.459237 GACGACGACGAGGAGGACTA 60.459 60.000 15.32 0.00 42.66 2.59
1686 1768 0.671251 CGAGGAGGACTAGATGGTGC 59.329 60.000 0.00 0.00 0.00 5.01
1691 1773 2.159028 GGAGGACTAGATGGTGCAGAAC 60.159 54.545 0.00 0.00 0.00 3.01
1695 1777 2.234908 GACTAGATGGTGCAGAACTGGT 59.765 50.000 0.00 0.00 0.00 4.00
1706 1788 1.610038 CAGAACTGGTGCAGCAATCAA 59.390 47.619 24.73 3.84 34.37 2.57
1711 1793 0.469705 TGGTGCAGCAATCAAAGGGT 60.470 50.000 17.80 0.00 0.00 4.34
1712 1794 0.037975 GGTGCAGCAATCAAAGGGTG 60.038 55.000 11.86 0.00 35.70 4.61
1714 1796 0.961019 TGCAGCAATCAAAGGGTGTC 59.039 50.000 0.00 0.00 35.09 3.67
1746 1836 0.237761 GTGCAAGACTCAGCTGCTTG 59.762 55.000 21.50 21.50 41.36 4.01
1750 1840 2.746362 GCAAGACTCAGCTGCTTGTAAT 59.254 45.455 24.44 8.97 40.73 1.89
1751 1841 3.935203 GCAAGACTCAGCTGCTTGTAATA 59.065 43.478 24.44 1.68 40.73 0.98
1752 1842 4.393062 GCAAGACTCAGCTGCTTGTAATAA 59.607 41.667 24.44 1.04 40.73 1.40
1753 1843 5.447010 GCAAGACTCAGCTGCTTGTAATAAG 60.447 44.000 24.44 11.56 40.73 1.73
1754 1844 5.667539 AGACTCAGCTGCTTGTAATAAGA 57.332 39.130 9.47 0.00 0.00 2.10
1755 1845 6.232581 AGACTCAGCTGCTTGTAATAAGAT 57.767 37.500 9.47 0.00 0.00 2.40
1756 1846 6.648192 AGACTCAGCTGCTTGTAATAAGATT 58.352 36.000 9.47 0.00 0.00 2.40
1757 1847 6.538021 AGACTCAGCTGCTTGTAATAAGATTG 59.462 38.462 9.47 0.00 0.00 2.67
1758 1848 5.065731 ACTCAGCTGCTTGTAATAAGATTGC 59.934 40.000 9.47 0.00 0.00 3.56
1759 1849 4.943093 TCAGCTGCTTGTAATAAGATTGCA 59.057 37.500 9.47 0.00 0.00 4.08
1760 1850 5.065602 TCAGCTGCTTGTAATAAGATTGCAG 59.934 40.000 9.47 0.00 46.11 4.41
1761 1851 4.946157 AGCTGCTTGTAATAAGATTGCAGT 59.054 37.500 12.54 0.00 45.42 4.40
1762 1852 5.065731 AGCTGCTTGTAATAAGATTGCAGTC 59.934 40.000 12.54 0.00 45.42 3.51
1763 1853 5.731686 GCTGCTTGTAATAAGATTGCAGTCC 60.732 44.000 5.47 0.00 45.42 3.85
1764 1854 4.332543 TGCTTGTAATAAGATTGCAGTCCG 59.667 41.667 5.47 0.00 0.00 4.79
1765 1855 4.332819 GCTTGTAATAAGATTGCAGTCCGT 59.667 41.667 5.47 0.00 0.00 4.69
1766 1856 5.502544 GCTTGTAATAAGATTGCAGTCCGTC 60.503 44.000 5.47 0.00 0.00 4.79
1767 1857 5.339008 TGTAATAAGATTGCAGTCCGTCT 57.661 39.130 5.47 0.00 0.00 4.18
1768 1858 6.459670 TGTAATAAGATTGCAGTCCGTCTA 57.540 37.500 5.47 0.00 0.00 2.59
1769 1859 6.270815 TGTAATAAGATTGCAGTCCGTCTAC 58.729 40.000 5.47 4.30 0.00 2.59
1770 1860 2.674796 AAGATTGCAGTCCGTCTACC 57.325 50.000 5.47 0.00 0.00 3.18
1771 1861 1.853963 AGATTGCAGTCCGTCTACCT 58.146 50.000 5.47 0.00 0.00 3.08
1772 1862 2.180276 AGATTGCAGTCCGTCTACCTT 58.820 47.619 5.47 0.00 0.00 3.50
1773 1863 2.166664 AGATTGCAGTCCGTCTACCTTC 59.833 50.000 5.47 0.00 0.00 3.46
1774 1864 1.629043 TTGCAGTCCGTCTACCTTCT 58.371 50.000 0.00 0.00 0.00 2.85
1775 1865 0.888619 TGCAGTCCGTCTACCTTCTG 59.111 55.000 0.00 0.00 0.00 3.02
1776 1866 0.458716 GCAGTCCGTCTACCTTCTGC 60.459 60.000 0.00 0.00 40.66 4.26
1777 1867 0.173708 CAGTCCGTCTACCTTCTGCC 59.826 60.000 0.00 0.00 0.00 4.85
1778 1868 0.251653 AGTCCGTCTACCTTCTGCCA 60.252 55.000 0.00 0.00 0.00 4.92
1779 1869 0.824759 GTCCGTCTACCTTCTGCCAT 59.175 55.000 0.00 0.00 0.00 4.40
1780 1870 1.207329 GTCCGTCTACCTTCTGCCATT 59.793 52.381 0.00 0.00 0.00 3.16
1781 1871 1.207089 TCCGTCTACCTTCTGCCATTG 59.793 52.381 0.00 0.00 0.00 2.82
1782 1872 1.009829 CGTCTACCTTCTGCCATTGC 58.990 55.000 0.00 0.00 38.26 3.56
1783 1873 1.406069 CGTCTACCTTCTGCCATTGCT 60.406 52.381 0.00 0.00 38.71 3.91
1784 1874 2.159099 CGTCTACCTTCTGCCATTGCTA 60.159 50.000 0.00 0.00 38.71 3.49
1785 1875 3.493350 CGTCTACCTTCTGCCATTGCTAT 60.493 47.826 0.00 0.00 38.71 2.97
1786 1876 3.812053 GTCTACCTTCTGCCATTGCTATG 59.188 47.826 0.68 0.68 38.71 2.23
1804 1894 9.856162 ATTGCTATGGTATATAATCATCATGCA 57.144 29.630 0.00 0.00 0.00 3.96
1805 1895 9.856162 TTGCTATGGTATATAATCATCATGCAT 57.144 29.630 0.00 0.00 0.00 3.96
1806 1896 9.498176 TGCTATGGTATATAATCATCATGCATC 57.502 33.333 0.00 0.00 0.00 3.91
1807 1897 9.722184 GCTATGGTATATAATCATCATGCATCT 57.278 33.333 0.00 0.00 0.00 2.90
1810 1900 8.652810 TGGTATATAATCATCATGCATCTTCG 57.347 34.615 0.00 0.00 0.00 3.79
1811 1901 8.260114 TGGTATATAATCATCATGCATCTTCGT 58.740 33.333 0.00 0.00 0.00 3.85
1812 1902 8.759641 GGTATATAATCATCATGCATCTTCGTC 58.240 37.037 0.00 0.00 0.00 4.20
1813 1903 9.526713 GTATATAATCATCATGCATCTTCGTCT 57.473 33.333 0.00 0.00 0.00 4.18
1819 1909 8.645730 ATCATCATGCATCTTCGTCTTATATC 57.354 34.615 0.00 0.00 0.00 1.63
1820 1910 6.749118 TCATCATGCATCTTCGTCTTATATCG 59.251 38.462 0.00 0.00 0.00 2.92
1821 1911 6.013842 TCATGCATCTTCGTCTTATATCGT 57.986 37.500 0.00 0.00 0.00 3.73
1822 1912 6.447162 TCATGCATCTTCGTCTTATATCGTT 58.553 36.000 0.00 0.00 0.00 3.85
1823 1913 6.582672 TCATGCATCTTCGTCTTATATCGTTC 59.417 38.462 0.00 0.00 0.00 3.95
1824 1914 6.073327 TGCATCTTCGTCTTATATCGTTCT 57.927 37.500 0.00 0.00 0.00 3.01
1825 1915 5.915196 TGCATCTTCGTCTTATATCGTTCTG 59.085 40.000 0.00 0.00 0.00 3.02
1826 1916 6.143496 GCATCTTCGTCTTATATCGTTCTGA 58.857 40.000 0.00 0.00 0.00 3.27
1827 1917 6.637254 GCATCTTCGTCTTATATCGTTCTGAA 59.363 38.462 0.00 0.00 0.00 3.02
1828 1918 7.357695 GCATCTTCGTCTTATATCGTTCTGAAC 60.358 40.741 10.48 10.48 0.00 3.18
1829 1919 6.493116 TCTTCGTCTTATATCGTTCTGAACC 58.507 40.000 14.48 0.00 0.00 3.62
1830 1920 6.318144 TCTTCGTCTTATATCGTTCTGAACCT 59.682 38.462 14.48 5.39 0.00 3.50
1831 1921 6.446781 TCGTCTTATATCGTTCTGAACCTT 57.553 37.500 14.48 5.22 0.00 3.50
1832 1922 6.263344 TCGTCTTATATCGTTCTGAACCTTG 58.737 40.000 14.48 1.62 0.00 3.61
1833 1923 6.034591 CGTCTTATATCGTTCTGAACCTTGT 58.965 40.000 14.48 3.90 0.00 3.16
1834 1924 6.530534 CGTCTTATATCGTTCTGAACCTTGTT 59.469 38.462 14.48 0.00 0.00 2.83
1835 1925 7.063074 CGTCTTATATCGTTCTGAACCTTGTTT 59.937 37.037 14.48 0.00 0.00 2.83
1836 1926 8.169268 GTCTTATATCGTTCTGAACCTTGTTTG 58.831 37.037 14.48 0.00 0.00 2.93
1837 1927 3.626028 ATCGTTCTGAACCTTGTTTGC 57.374 42.857 14.48 0.00 0.00 3.68
1838 1928 2.360844 TCGTTCTGAACCTTGTTTGCA 58.639 42.857 14.48 0.00 0.00 4.08
1839 1929 2.750166 TCGTTCTGAACCTTGTTTGCAA 59.250 40.909 14.48 0.00 0.00 4.08
1840 1930 2.851824 CGTTCTGAACCTTGTTTGCAAC 59.148 45.455 14.48 0.00 0.00 4.17
1841 1931 3.427503 CGTTCTGAACCTTGTTTGCAACT 60.428 43.478 14.48 0.00 0.00 3.16
1842 1932 4.201871 CGTTCTGAACCTTGTTTGCAACTA 60.202 41.667 14.48 0.00 0.00 2.24
1843 1933 5.273944 GTTCTGAACCTTGTTTGCAACTAG 58.726 41.667 9.38 1.22 34.63 2.57
1844 1934 4.523083 TCTGAACCTTGTTTGCAACTAGT 58.477 39.130 0.00 0.00 33.28 2.57
1845 1935 5.676552 TCTGAACCTTGTTTGCAACTAGTA 58.323 37.500 0.00 0.00 33.28 1.82
1846 1936 5.526111 TCTGAACCTTGTTTGCAACTAGTAC 59.474 40.000 0.00 0.00 33.28 2.73
1847 1937 5.433526 TGAACCTTGTTTGCAACTAGTACT 58.566 37.500 0.00 0.00 33.28 2.73
1848 1938 5.295787 TGAACCTTGTTTGCAACTAGTACTG 59.704 40.000 5.39 0.00 33.28 2.74
1849 1939 5.031066 ACCTTGTTTGCAACTAGTACTGA 57.969 39.130 5.39 0.00 33.28 3.41
1850 1940 5.621193 ACCTTGTTTGCAACTAGTACTGAT 58.379 37.500 5.39 0.00 33.28 2.90
1851 1941 5.470098 ACCTTGTTTGCAACTAGTACTGATG 59.530 40.000 5.39 2.89 33.28 3.07
1852 1942 5.700832 CCTTGTTTGCAACTAGTACTGATGA 59.299 40.000 5.39 0.00 33.28 2.92
1853 1943 6.372659 CCTTGTTTGCAACTAGTACTGATGAT 59.627 38.462 5.39 0.00 33.28 2.45
1854 1944 7.094634 CCTTGTTTGCAACTAGTACTGATGATT 60.095 37.037 5.39 0.00 33.28 2.57
1855 1945 7.364522 TGTTTGCAACTAGTACTGATGATTC 57.635 36.000 5.39 0.00 0.00 2.52
1856 1946 6.371548 TGTTTGCAACTAGTACTGATGATTCC 59.628 38.462 5.39 0.00 0.00 3.01
1857 1947 5.939764 TGCAACTAGTACTGATGATTCCT 57.060 39.130 5.39 0.00 0.00 3.36
1858 1948 5.664457 TGCAACTAGTACTGATGATTCCTG 58.336 41.667 5.39 0.00 0.00 3.86
1859 1949 5.053145 GCAACTAGTACTGATGATTCCTGG 58.947 45.833 5.39 0.00 0.00 4.45
1860 1950 5.395768 GCAACTAGTACTGATGATTCCTGGT 60.396 44.000 5.39 0.00 0.00 4.00
1861 1951 5.860941 ACTAGTACTGATGATTCCTGGTG 57.139 43.478 5.39 0.00 0.00 4.17
1862 1952 5.273208 ACTAGTACTGATGATTCCTGGTGT 58.727 41.667 5.39 0.00 0.00 4.16
1863 1953 4.478206 AGTACTGATGATTCCTGGTGTG 57.522 45.455 0.00 0.00 0.00 3.82
1864 1954 3.840666 AGTACTGATGATTCCTGGTGTGT 59.159 43.478 0.00 0.00 0.00 3.72
1865 1955 3.795688 ACTGATGATTCCTGGTGTGTT 57.204 42.857 0.00 0.00 0.00 3.32
1866 1956 4.104383 ACTGATGATTCCTGGTGTGTTT 57.896 40.909 0.00 0.00 0.00 2.83
1867 1957 4.473444 ACTGATGATTCCTGGTGTGTTTT 58.527 39.130 0.00 0.00 0.00 2.43
1868 1958 4.895297 ACTGATGATTCCTGGTGTGTTTTT 59.105 37.500 0.00 0.00 0.00 1.94
1923 2013 3.766151 GTGAAGTACGATTGGATGTCGA 58.234 45.455 2.28 0.00 41.40 4.20
1924 2014 3.791887 GTGAAGTACGATTGGATGTCGAG 59.208 47.826 2.28 0.00 41.40 4.04
1925 2015 3.442625 TGAAGTACGATTGGATGTCGAGT 59.557 43.478 2.28 0.00 41.40 4.18
1926 2016 4.082408 TGAAGTACGATTGGATGTCGAGTT 60.082 41.667 2.28 0.00 41.40 3.01
1927 2017 3.770666 AGTACGATTGGATGTCGAGTTG 58.229 45.455 2.28 0.00 41.40 3.16
1928 2018 3.442625 AGTACGATTGGATGTCGAGTTGA 59.557 43.478 2.28 0.00 41.40 3.18
1929 2019 3.313012 ACGATTGGATGTCGAGTTGAA 57.687 42.857 2.28 0.00 41.40 2.69
1930 2020 2.993899 ACGATTGGATGTCGAGTTGAAC 59.006 45.455 2.28 0.00 41.40 3.18
1931 2021 2.993220 CGATTGGATGTCGAGTTGAACA 59.007 45.455 0.00 0.00 41.40 3.18
1932 2022 3.181530 CGATTGGATGTCGAGTTGAACAC 60.182 47.826 0.00 0.00 41.40 3.32
1933 2023 3.469008 TTGGATGTCGAGTTGAACACT 57.531 42.857 0.00 0.00 39.07 3.55
1934 2024 3.469008 TGGATGTCGAGTTGAACACTT 57.531 42.857 0.00 0.00 35.01 3.16
1935 2025 3.804036 TGGATGTCGAGTTGAACACTTT 58.196 40.909 0.00 0.00 35.01 2.66
1936 2026 4.951254 TGGATGTCGAGTTGAACACTTTA 58.049 39.130 0.00 0.00 35.01 1.85
1937 2027 4.748102 TGGATGTCGAGTTGAACACTTTAC 59.252 41.667 0.00 0.00 35.01 2.01
1938 2028 4.748102 GGATGTCGAGTTGAACACTTTACA 59.252 41.667 0.00 0.00 35.01 2.41
1939 2029 5.333111 GGATGTCGAGTTGAACACTTTACAC 60.333 44.000 0.00 0.00 35.01 2.90
1940 2030 3.548668 TGTCGAGTTGAACACTTTACACG 59.451 43.478 0.00 0.00 35.01 4.49
1941 2031 3.060740 GTCGAGTTGAACACTTTACACGG 60.061 47.826 0.00 0.00 35.01 4.94
1942 2032 2.220133 CGAGTTGAACACTTTACACGGG 59.780 50.000 0.00 0.00 35.01 5.28
1943 2033 3.460103 GAGTTGAACACTTTACACGGGA 58.540 45.455 0.00 0.00 35.01 5.14
1944 2034 3.872771 GAGTTGAACACTTTACACGGGAA 59.127 43.478 0.00 0.00 35.01 3.97
1945 2035 3.624410 AGTTGAACACTTTACACGGGAAC 59.376 43.478 0.00 0.00 27.32 3.62
1946 2036 5.455937 AGTTGAACACTTTACACGGGAACC 61.456 45.833 0.00 0.00 37.63 3.62
1971 2061 3.073735 CCAGGACTCGGCAGCTCT 61.074 66.667 0.00 0.00 0.00 4.09
1972 2062 2.493973 CAGGACTCGGCAGCTCTC 59.506 66.667 0.00 0.00 0.00 3.20
1973 2063 2.036414 AGGACTCGGCAGCTCTCA 59.964 61.111 0.00 0.00 0.00 3.27
1974 2064 2.183046 GGACTCGGCAGCTCTCAC 59.817 66.667 0.00 0.00 0.00 3.51
1975 2065 2.202544 GACTCGGCAGCTCTCACG 60.203 66.667 0.00 0.00 0.00 4.35
1976 2066 3.691744 GACTCGGCAGCTCTCACGG 62.692 68.421 0.00 0.00 0.00 4.94
1977 2067 4.504916 CTCGGCAGCTCTCACGGG 62.505 72.222 0.00 0.00 0.00 5.28
1979 2069 3.842923 CGGCAGCTCTCACGGGAT 61.843 66.667 0.00 0.00 0.00 3.85
1980 2070 2.107953 GGCAGCTCTCACGGGATC 59.892 66.667 0.00 0.00 0.00 3.36
1981 2071 2.279120 GCAGCTCTCACGGGATCG 60.279 66.667 0.00 0.00 43.02 3.69
1982 2072 2.775856 GCAGCTCTCACGGGATCGA 61.776 63.158 0.00 0.00 40.11 3.59
1983 2073 2.037053 CAGCTCTCACGGGATCGAT 58.963 57.895 0.00 0.00 40.11 3.59
1984 2074 0.318529 CAGCTCTCACGGGATCGATG 60.319 60.000 0.54 0.00 40.11 3.84
1985 2075 1.663074 GCTCTCACGGGATCGATGC 60.663 63.158 8.63 8.63 40.11 3.91
1986 2076 1.735973 CTCTCACGGGATCGATGCA 59.264 57.895 19.14 0.00 40.11 3.96
1987 2077 0.596083 CTCTCACGGGATCGATGCAC 60.596 60.000 19.14 7.23 40.11 4.57
1988 2078 1.141665 CTCACGGGATCGATGCACA 59.858 57.895 19.14 0.00 40.11 4.57
1989 2079 0.460109 CTCACGGGATCGATGCACAA 60.460 55.000 19.14 0.18 40.11 3.33
1990 2080 0.177836 TCACGGGATCGATGCACAAT 59.822 50.000 19.14 0.00 40.11 2.71
1991 2081 1.016627 CACGGGATCGATGCACAATT 58.983 50.000 19.14 0.00 40.11 2.32
1992 2082 1.003545 CACGGGATCGATGCACAATTC 60.004 52.381 19.14 0.00 40.11 2.17
1993 2083 0.233074 CGGGATCGATGCACAATTCG 59.767 55.000 19.14 7.85 39.00 3.34
1995 2085 1.261619 GGGATCGATGCACAATTCGAC 59.738 52.381 19.14 6.82 46.03 4.20
1996 2086 1.261619 GGATCGATGCACAATTCGACC 59.738 52.381 12.54 11.34 46.03 4.79
1997 2087 2.205074 GATCGATGCACAATTCGACCT 58.795 47.619 11.99 0.00 46.03 3.85
1998 2088 2.951457 TCGATGCACAATTCGACCTA 57.049 45.000 6.05 0.00 39.29 3.08
1999 2089 2.809446 TCGATGCACAATTCGACCTAG 58.191 47.619 6.05 0.00 39.29 3.02
2000 2090 2.425668 TCGATGCACAATTCGACCTAGA 59.574 45.455 6.05 0.00 39.29 2.43
2001 2091 2.535984 CGATGCACAATTCGACCTAGAC 59.464 50.000 1.16 0.00 37.55 2.59
2002 2092 3.735208 CGATGCACAATTCGACCTAGACT 60.735 47.826 1.16 0.00 37.55 3.24
2003 2093 3.232213 TGCACAATTCGACCTAGACTC 57.768 47.619 0.00 0.00 0.00 3.36
2004 2094 2.186076 GCACAATTCGACCTAGACTCG 58.814 52.381 0.00 0.00 0.00 4.18
2005 2095 2.159421 GCACAATTCGACCTAGACTCGA 60.159 50.000 8.04 8.04 38.38 4.04
2011 2101 3.170791 TCGACCTAGACTCGAATACGT 57.829 47.619 9.33 0.00 37.22 3.57
2012 2102 4.307443 TCGACCTAGACTCGAATACGTA 57.693 45.455 9.33 0.00 37.22 3.57
2013 2103 4.045104 TCGACCTAGACTCGAATACGTAC 58.955 47.826 0.00 0.00 37.22 3.67
2014 2104 3.121529 CGACCTAGACTCGAATACGTACG 60.122 52.174 15.01 15.01 40.69 3.67
2015 2105 3.126831 ACCTAGACTCGAATACGTACGG 58.873 50.000 21.06 0.68 40.69 4.02
2016 2106 3.181475 ACCTAGACTCGAATACGTACGGA 60.181 47.826 21.06 12.56 40.69 4.69
2017 2107 3.183373 CCTAGACTCGAATACGTACGGAC 59.817 52.174 21.06 6.69 40.69 4.79
2126 2216 1.497286 ACACCACCCAAGTACCACAAT 59.503 47.619 0.00 0.00 0.00 2.71
2225 2315 1.075970 ATCTAGTCAGGCTCCGGCA 60.076 57.895 0.00 0.00 40.87 5.69
2230 2320 4.704103 TCAGGCTCCGGCAGAGGT 62.704 66.667 0.00 0.00 43.46 3.85
2281 2371 2.336809 GAGCGGAGATCGGCGATT 59.663 61.111 24.81 13.61 45.36 3.34
2422 2512 2.172851 TATTGCGAACGGTCCAAAGT 57.827 45.000 8.18 0.00 0.00 2.66
2544 2634 2.511600 CCCACCGACAATCTCGCC 60.512 66.667 0.00 0.00 41.46 5.54
2696 2786 2.982130 GTCCACGGATCCACTGCT 59.018 61.111 13.41 0.00 0.00 4.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 16 7.541162 TCAATAAACGGATCTACGAGAAAAGA 58.459 34.615 0.00 0.00 37.61 2.52
20 22 7.906160 ACATTTTCAATAAACGGATCTACGAG 58.094 34.615 0.00 0.00 37.61 4.18
43 45 6.183360 GGACGCACGGTTTAATAGATAAAACA 60.183 38.462 0.00 0.00 40.57 2.83
53 55 3.078837 AGATTTGGACGCACGGTTTAAT 58.921 40.909 0.00 0.00 0.00 1.40
99 101 3.246619 AGTTTTGAAGATCTCGAGCGAC 58.753 45.455 7.81 1.32 0.00 5.19
178 181 0.320073 CGTGCTCCCGGTTCAGTTTA 60.320 55.000 0.00 0.00 0.00 2.01
222 228 2.683859 CGTCAGAGACACGGGCGTA 61.684 63.158 0.00 0.00 37.07 4.42
232 238 2.035449 ACGGTTGTGATTTCGTCAGAGA 59.965 45.455 0.00 0.00 37.56 3.10
254 260 1.070786 TTTTGCTTCCGCGAGAGGT 59.929 52.632 8.23 0.00 39.65 3.85
447 503 1.070786 TTTTGCTTCCGCGAGAGGT 59.929 52.632 8.23 0.00 39.65 3.85
591 660 6.923508 CCTAGCTTTTCGACCAAAAAGAAAAT 59.076 34.615 10.73 0.00 45.12 1.82
596 665 3.818773 TCCCTAGCTTTTCGACCAAAAAG 59.181 43.478 0.00 3.44 45.10 2.27
597 666 3.822940 TCCCTAGCTTTTCGACCAAAAA 58.177 40.909 0.00 0.00 33.40 1.94
598 667 3.495434 TCCCTAGCTTTTCGACCAAAA 57.505 42.857 0.00 0.00 32.77 2.44
603 672 2.619147 GGTCTTCCCTAGCTTTTCGAC 58.381 52.381 0.00 0.00 0.00 4.20
605 674 1.203994 TCGGTCTTCCCTAGCTTTTCG 59.796 52.381 0.00 0.00 0.00 3.46
612 681 3.623510 GCTTTTTCATCGGTCTTCCCTAG 59.376 47.826 0.00 0.00 0.00 3.02
615 684 2.159382 TGCTTTTTCATCGGTCTTCCC 58.841 47.619 0.00 0.00 0.00 3.97
660 731 0.526662 TTTCCGCACGTGTTTTTGGT 59.473 45.000 18.38 0.00 0.00 3.67
669 740 8.576936 TTTAATTTTCTTAATTTTCCGCACGT 57.423 26.923 0.00 0.00 0.00 4.49
681 752 9.634163 GCTTCCTTCGGATTTTAATTTTCTTAA 57.366 29.630 0.00 0.00 0.00 1.85
685 756 5.004440 GCGCTTCCTTCGGATTTTAATTTTC 59.996 40.000 0.00 0.00 0.00 2.29
690 761 1.741145 GGCGCTTCCTTCGGATTTTAA 59.259 47.619 7.64 0.00 0.00 1.52
700 771 2.358737 CGTTCTGGGCGCTTCCTT 60.359 61.111 7.64 0.00 34.39 3.36
739 810 2.655044 GCGCTGTTTTGCACGCTT 60.655 55.556 9.58 0.00 41.15 4.68
744 815 1.207339 CGATCAGCGCTGTTTTGCA 59.793 52.632 34.70 16.84 0.00 4.08
747 818 0.385974 GCAACGATCAGCGCTGTTTT 60.386 50.000 34.70 21.47 46.04 2.43
756 827 1.916651 CAGAAGTCTCGCAACGATCAG 59.083 52.381 0.00 0.00 34.61 2.90
770 841 2.622064 ACAAGCGTTCCTTCAGAAGT 57.378 45.000 9.41 0.00 34.29 3.01
773 844 6.228258 ACTAATTAACAAGCGTTCCTTCAGA 58.772 36.000 0.00 0.00 36.52 3.27
775 846 6.664515 CAACTAATTAACAAGCGTTCCTTCA 58.335 36.000 0.00 0.00 36.52 3.02
782 853 4.091509 CGAGAGCAACTAATTAACAAGCGT 59.908 41.667 0.00 0.00 0.00 5.07
787 858 7.225931 AGTTTGAACGAGAGCAACTAATTAACA 59.774 33.333 0.00 0.00 0.00 2.41
793 864 3.807622 CCAGTTTGAACGAGAGCAACTAA 59.192 43.478 0.00 0.00 0.00 2.24
805 876 0.928451 GCAACGCGACCAGTTTGAAC 60.928 55.000 15.93 0.00 0.00 3.18
806 877 1.353804 GCAACGCGACCAGTTTGAA 59.646 52.632 15.93 0.00 0.00 2.69
807 878 2.539338 GGCAACGCGACCAGTTTGA 61.539 57.895 15.93 0.00 0.00 2.69
808 879 2.051345 GGCAACGCGACCAGTTTG 60.051 61.111 15.93 6.84 0.00 2.93
809 880 3.284449 GGGCAACGCGACCAGTTT 61.284 61.111 15.93 0.00 37.60 2.66
819 890 2.818274 GCGGAACTAGGGGCAACG 60.818 66.667 0.00 0.00 37.60 4.10
820 891 2.818274 CGCGGAACTAGGGGCAAC 60.818 66.667 0.00 0.00 0.00 4.17
821 892 2.998480 TCGCGGAACTAGGGGCAA 60.998 61.111 6.13 0.00 0.00 4.52
822 893 3.458163 CTCGCGGAACTAGGGGCA 61.458 66.667 6.13 0.00 0.00 5.36
823 894 4.222847 CCTCGCGGAACTAGGGGC 62.223 72.222 6.13 0.00 0.00 5.80
824 895 2.758737 ACCTCGCGGAACTAGGGG 60.759 66.667 14.52 3.90 34.52 4.79
825 896 2.005960 CTCACCTCGCGGAACTAGGG 62.006 65.000 14.52 4.75 34.52 3.53
826 897 1.030488 TCTCACCTCGCGGAACTAGG 61.030 60.000 6.13 7.91 36.42 3.02
827 898 0.099082 GTCTCACCTCGCGGAACTAG 59.901 60.000 6.13 0.00 0.00 2.57
828 899 0.322277 AGTCTCACCTCGCGGAACTA 60.322 55.000 6.13 0.00 0.00 2.24
829 900 0.322277 TAGTCTCACCTCGCGGAACT 60.322 55.000 6.13 4.97 0.00 3.01
830 901 0.524862 TTAGTCTCACCTCGCGGAAC 59.475 55.000 6.13 0.00 0.00 3.62
831 902 1.134367 CATTAGTCTCACCTCGCGGAA 59.866 52.381 6.13 0.00 0.00 4.30
832 903 0.738975 CATTAGTCTCACCTCGCGGA 59.261 55.000 6.13 0.00 0.00 5.54
833 904 0.872021 GCATTAGTCTCACCTCGCGG 60.872 60.000 6.13 0.00 0.00 6.46
834 905 1.202973 CGCATTAGTCTCACCTCGCG 61.203 60.000 0.00 0.00 35.14 5.87
835 906 0.872021 CCGCATTAGTCTCACCTCGC 60.872 60.000 0.00 0.00 0.00 5.03
836 907 0.872021 GCCGCATTAGTCTCACCTCG 60.872 60.000 0.00 0.00 0.00 4.63
837 908 0.175760 TGCCGCATTAGTCTCACCTC 59.824 55.000 0.00 0.00 0.00 3.85
838 909 0.833287 ATGCCGCATTAGTCTCACCT 59.167 50.000 0.00 0.00 0.00 4.00
839 910 0.940126 CATGCCGCATTAGTCTCACC 59.060 55.000 2.16 0.00 0.00 4.02
840 911 0.940126 CCATGCCGCATTAGTCTCAC 59.060 55.000 2.16 0.00 0.00 3.51
841 912 0.179048 CCCATGCCGCATTAGTCTCA 60.179 55.000 2.16 0.00 0.00 3.27
842 913 1.510480 GCCCATGCCGCATTAGTCTC 61.510 60.000 2.16 0.00 0.00 3.36
843 914 1.526917 GCCCATGCCGCATTAGTCT 60.527 57.895 2.16 0.00 0.00 3.24
844 915 3.034030 GCCCATGCCGCATTAGTC 58.966 61.111 2.16 0.00 0.00 2.59
861 932 4.388499 ACGCACCGTTGGGCTAGG 62.388 66.667 0.00 0.00 36.35 3.02
862 933 3.118454 CACGCACCGTTGGGCTAG 61.118 66.667 0.00 0.00 38.32 3.42
863 934 4.690719 CCACGCACCGTTGGGCTA 62.691 66.667 0.00 0.00 38.32 3.93
876 947 0.440758 TAAAATGAACGAGCGCCACG 59.559 50.000 19.96 19.96 0.00 4.94
877 948 2.825086 ATAAAATGAACGAGCGCCAC 57.175 45.000 2.29 0.00 0.00 5.01
878 949 2.096819 GGAATAAAATGAACGAGCGCCA 59.903 45.455 2.29 0.00 0.00 5.69
879 950 2.354821 AGGAATAAAATGAACGAGCGCC 59.645 45.455 2.29 0.00 0.00 6.53
880 951 3.675467 AGGAATAAAATGAACGAGCGC 57.325 42.857 0.00 0.00 0.00 5.92
881 952 4.969816 ACAAGGAATAAAATGAACGAGCG 58.030 39.130 0.00 0.00 0.00 5.03
882 953 7.637709 AAAACAAGGAATAAAATGAACGAGC 57.362 32.000 0.00 0.00 0.00 5.03
904 975 3.665190 ACCAAAACACAAAGCGGAAAAA 58.335 36.364 0.00 0.00 0.00 1.94
905 976 3.320673 ACCAAAACACAAAGCGGAAAA 57.679 38.095 0.00 0.00 0.00 2.29
906 977 3.320673 AACCAAAACACAAAGCGGAAA 57.679 38.095 0.00 0.00 0.00 3.13
907 978 3.320673 AAACCAAAACACAAAGCGGAA 57.679 38.095 0.00 0.00 0.00 4.30
908 979 3.320673 AAAACCAAAACACAAAGCGGA 57.679 38.095 0.00 0.00 0.00 5.54
909 980 3.741687 CAAAAACCAAAACACAAAGCGG 58.258 40.909 0.00 0.00 0.00 5.52
910 981 3.159785 GCAAAAACCAAAACACAAAGCG 58.840 40.909 0.00 0.00 0.00 4.68
911 982 3.159785 CGCAAAAACCAAAACACAAAGC 58.840 40.909 0.00 0.00 0.00 3.51
912 983 4.084328 TGACGCAAAAACCAAAACACAAAG 60.084 37.500 0.00 0.00 0.00 2.77
913 984 3.807622 TGACGCAAAAACCAAAACACAAA 59.192 34.783 0.00 0.00 0.00 2.83
914 985 3.390135 TGACGCAAAAACCAAAACACAA 58.610 36.364 0.00 0.00 0.00 3.33
915 986 2.989840 CTGACGCAAAAACCAAAACACA 59.010 40.909 0.00 0.00 0.00 3.72
916 987 2.990514 ACTGACGCAAAAACCAAAACAC 59.009 40.909 0.00 0.00 0.00 3.32
917 988 3.305398 ACTGACGCAAAAACCAAAACA 57.695 38.095 0.00 0.00 0.00 2.83
918 989 4.390501 CAAACTGACGCAAAAACCAAAAC 58.609 39.130 0.00 0.00 0.00 2.43
919 990 3.433615 CCAAACTGACGCAAAAACCAAAA 59.566 39.130 0.00 0.00 0.00 2.44
920 991 2.996621 CCAAACTGACGCAAAAACCAAA 59.003 40.909 0.00 0.00 0.00 3.28
921 992 2.028930 ACCAAACTGACGCAAAAACCAA 60.029 40.909 0.00 0.00 0.00 3.67
922 993 1.546476 ACCAAACTGACGCAAAAACCA 59.454 42.857 0.00 0.00 0.00 3.67
923 994 1.923864 CACCAAACTGACGCAAAAACC 59.076 47.619 0.00 0.00 0.00 3.27
924 995 2.344142 CACACCAAACTGACGCAAAAAC 59.656 45.455 0.00 0.00 0.00 2.43
925 996 2.600731 CACACCAAACTGACGCAAAAA 58.399 42.857 0.00 0.00 0.00 1.94
926 997 1.135257 CCACACCAAACTGACGCAAAA 60.135 47.619 0.00 0.00 0.00 2.44
927 998 0.453793 CCACACCAAACTGACGCAAA 59.546 50.000 0.00 0.00 0.00 3.68
928 999 1.999071 GCCACACCAAACTGACGCAA 61.999 55.000 0.00 0.00 0.00 4.85
929 1000 2.477176 GCCACACCAAACTGACGCA 61.477 57.895 0.00 0.00 0.00 5.24
930 1001 1.724582 AAGCCACACCAAACTGACGC 61.725 55.000 0.00 0.00 0.00 5.19
931 1002 0.738389 AAAGCCACACCAAACTGACG 59.262 50.000 0.00 0.00 0.00 4.35
932 1003 2.959507 AAAAGCCACACCAAACTGAC 57.040 45.000 0.00 0.00 0.00 3.51
961 1032 7.161404 AGCCGCAGATAATATACTCATTTCAA 58.839 34.615 0.00 0.00 0.00 2.69
962 1033 6.701340 AGCCGCAGATAATATACTCATTTCA 58.299 36.000 0.00 0.00 0.00 2.69
963 1034 7.038659 AGAGCCGCAGATAATATACTCATTTC 58.961 38.462 0.00 0.00 0.00 2.17
964 1035 6.940739 AGAGCCGCAGATAATATACTCATTT 58.059 36.000 0.00 0.00 0.00 2.32
965 1036 6.537453 AGAGCCGCAGATAATATACTCATT 57.463 37.500 0.00 0.00 0.00 2.57
966 1037 5.220951 CGAGAGCCGCAGATAATATACTCAT 60.221 44.000 0.00 0.00 0.00 2.90
967 1038 4.095036 CGAGAGCCGCAGATAATATACTCA 59.905 45.833 0.00 0.00 0.00 3.41
968 1039 4.095185 ACGAGAGCCGCAGATAATATACTC 59.905 45.833 0.00 0.00 43.32 2.59
969 1040 4.011023 ACGAGAGCCGCAGATAATATACT 58.989 43.478 0.00 0.00 43.32 2.12
993 1064 3.375299 CGACAAGAAAGAAGGGGCTAATG 59.625 47.826 0.00 0.00 0.00 1.90
998 1069 1.807142 CTTCGACAAGAAAGAAGGGGC 59.193 52.381 0.00 0.00 38.57 5.80
1008 1082 0.884704 GCTGTTGGGCTTCGACAAGA 60.885 55.000 0.00 0.00 39.15 3.02
1010 1084 1.896660 GGCTGTTGGGCTTCGACAA 60.897 57.895 0.00 0.00 39.15 3.18
1012 1086 3.423154 CGGCTGTTGGGCTTCGAC 61.423 66.667 0.00 0.00 38.46 4.20
1019 1093 2.895372 GATACCGCGGCTGTTGGG 60.895 66.667 28.58 0.00 0.00 4.12
1023 1097 3.900892 CGAGGATACCGCGGCTGT 61.901 66.667 28.58 11.79 42.79 4.40
1030 1104 0.594602 TCCGTATTGCGAGGATACCG 59.405 55.000 0.00 0.00 44.77 4.02
1031 1105 2.492484 AGATCCGTATTGCGAGGATACC 59.508 50.000 0.00 0.00 44.13 2.73
1032 1106 3.851976 AGATCCGTATTGCGAGGATAC 57.148 47.619 0.00 0.00 44.13 2.24
1033 1107 4.840271 TCTAGATCCGTATTGCGAGGATA 58.160 43.478 0.00 0.00 44.13 2.59
1038 1112 3.371285 CGATCTCTAGATCCGTATTGCGA 59.629 47.826 13.12 0.00 46.16 5.10
1045 1119 6.204301 TCGAAATAAACGATCTCTAGATCCGT 59.796 38.462 13.12 11.34 46.16 4.69
1054 1128 4.595116 TCCGTCTCGAAATAAACGATCTC 58.405 43.478 0.00 0.00 39.02 2.75
1056 1130 4.595116 TCTCCGTCTCGAAATAAACGATC 58.405 43.478 0.00 0.00 39.02 3.69
1057 1131 4.497674 CCTCTCCGTCTCGAAATAAACGAT 60.498 45.833 0.00 0.00 39.02 3.73
1064 1138 1.043673 CCCCCTCTCCGTCTCGAAAT 61.044 60.000 0.00 0.00 0.00 2.17
1070 1147 2.947785 ACCTCCCCCTCTCCGTCT 60.948 66.667 0.00 0.00 0.00 4.18
1074 1151 2.041405 CCTGACCTCCCCCTCTCC 60.041 72.222 0.00 0.00 0.00 3.71
1078 1155 2.958739 TAGCCCTGACCTCCCCCT 60.959 66.667 0.00 0.00 0.00 4.79
1082 1159 1.742768 CGATGTAGCCCTGACCTCC 59.257 63.158 0.00 0.00 0.00 4.30
1096 1173 4.935495 CCGCCATCACCCCCGATG 62.935 72.222 0.00 0.00 42.09 3.84
1121 1202 1.995991 CATCGTCTTGCGGTTACGG 59.004 57.895 0.00 0.00 41.72 4.02
1166 1247 3.960755 TCTTCCTCTTGAGTGAACAGTCA 59.039 43.478 8.07 8.07 38.87 3.41
1167 1248 4.592485 TCTTCCTCTTGAGTGAACAGTC 57.408 45.455 3.04 3.04 0.00 3.51
1168 1249 4.202305 CCTTCTTCCTCTTGAGTGAACAGT 60.202 45.833 0.00 0.00 0.00 3.55
1169 1250 4.314121 CCTTCTTCCTCTTGAGTGAACAG 58.686 47.826 0.00 0.00 0.00 3.16
1170 1251 3.495100 GCCTTCTTCCTCTTGAGTGAACA 60.495 47.826 0.00 0.00 0.00 3.18
1171 1252 3.070748 GCCTTCTTCCTCTTGAGTGAAC 58.929 50.000 0.00 0.00 0.00 3.18
1172 1253 2.289072 CGCCTTCTTCCTCTTGAGTGAA 60.289 50.000 0.00 0.48 0.00 3.18
1173 1254 1.273606 CGCCTTCTTCCTCTTGAGTGA 59.726 52.381 0.00 0.00 0.00 3.41
1174 1255 1.273606 TCGCCTTCTTCCTCTTGAGTG 59.726 52.381 0.00 0.00 0.00 3.51
1175 1256 1.548269 CTCGCCTTCTTCCTCTTGAGT 59.452 52.381 0.00 0.00 0.00 3.41
1176 1257 1.738700 GCTCGCCTTCTTCCTCTTGAG 60.739 57.143 0.00 0.00 0.00 3.02
1177 1258 0.247736 GCTCGCCTTCTTCCTCTTGA 59.752 55.000 0.00 0.00 0.00 3.02
1178 1259 0.248843 AGCTCGCCTTCTTCCTCTTG 59.751 55.000 0.00 0.00 0.00 3.02
1179 1260 0.534873 GAGCTCGCCTTCTTCCTCTT 59.465 55.000 0.00 0.00 0.00 2.85
1180 1261 1.662438 CGAGCTCGCCTTCTTCCTCT 61.662 60.000 25.07 0.00 0.00 3.69
1181 1262 1.226831 CGAGCTCGCCTTCTTCCTC 60.227 63.158 25.07 0.00 0.00 3.71
1182 1263 1.939769 GACGAGCTCGCCTTCTTCCT 61.940 60.000 34.83 13.06 44.43 3.36
1183 1264 1.517475 GACGAGCTCGCCTTCTTCC 60.517 63.158 34.83 10.68 44.43 3.46
1184 1265 1.870016 CGACGAGCTCGCCTTCTTC 60.870 63.158 34.83 21.94 44.43 2.87
1185 1266 2.179517 CGACGAGCTCGCCTTCTT 59.820 61.111 34.83 15.48 44.43 2.52
1186 1267 3.816524 CCGACGAGCTCGCCTTCT 61.817 66.667 34.83 16.29 44.43 2.85
1187 1268 3.743091 CTCCGACGAGCTCGCCTTC 62.743 68.421 34.83 23.36 44.43 3.46
1188 1269 3.816524 CTCCGACGAGCTCGCCTT 61.817 66.667 34.83 17.12 44.43 4.35
1202 1283 2.047179 GAACAGTCACCGGCCTCC 60.047 66.667 0.00 0.00 0.00 4.30
1203 1284 2.741092 TGAACAGTCACCGGCCTC 59.259 61.111 0.00 0.00 0.00 4.70
1260 1341 2.293677 TCCTCTTGACGAGTGAACAGTC 59.706 50.000 0.00 0.00 38.11 3.51
1272 1353 2.003196 CTCGGCTTCTTCCTCTTGAC 57.997 55.000 0.00 0.00 0.00 3.18
1311 1392 2.393646 CTTCTTCCTCTTCTCCGGGAT 58.606 52.381 0.00 0.00 0.00 3.85
1321 1402 2.290577 GGCATGAACACCTTCTTCCTCT 60.291 50.000 0.00 0.00 0.00 3.69
1322 1403 2.087646 GGCATGAACACCTTCTTCCTC 58.912 52.381 0.00 0.00 0.00 3.71
1323 1404 1.611673 CGGCATGAACACCTTCTTCCT 60.612 52.381 0.00 0.00 0.00 3.36
1344 1425 4.268939 AACGTCCGTCGGCGACAA 62.269 61.111 35.62 22.30 44.69 3.18
1346 1427 4.395583 AGAACGTCCGTCGGCGAC 62.396 66.667 29.06 29.06 44.69 5.19
1358 1439 1.856265 GCCTCTTGCCCAACAGAACG 61.856 60.000 0.00 0.00 0.00 3.95
1460 1541 1.029947 GGTAGGGGTTTGCCACGATG 61.030 60.000 0.00 0.00 44.83 3.84
1504 1586 3.080158 TTGGTTTCCCTGGCCAGCA 62.080 57.895 28.39 15.69 33.41 4.41
1537 1619 3.981308 GCCTGCTTTTGGCGTAGA 58.019 55.556 0.00 0.00 45.43 2.59
1555 1637 2.490217 CGATCTTGTCGGCCGTCT 59.510 61.111 27.15 2.79 46.47 4.18
1567 1649 3.917760 GCTGGTAGGCGGCGATCT 61.918 66.667 12.98 9.96 0.00 2.75
1634 1716 0.961358 CCTCCTCGTCCGTGACTTCT 60.961 60.000 3.15 0.00 0.00 2.85
1637 1719 1.377463 CTCCTCCTCGTCCGTGACT 60.377 63.158 3.15 0.00 0.00 3.41
1643 1725 1.454295 GTCCTCCTCCTCCTCGTCC 60.454 68.421 0.00 0.00 0.00 4.79
1649 1731 2.114051 GTCGTCGTCCTCCTCCTCC 61.114 68.421 0.00 0.00 0.00 4.30
1652 1734 2.435586 TCGTCGTCGTCCTCCTCC 60.436 66.667 1.33 0.00 38.33 4.30
1655 1737 2.435586 TCCTCGTCGTCGTCCTCC 60.436 66.667 1.33 0.00 38.33 4.30
1658 1740 2.435586 TCCTCCTCGTCGTCGTCC 60.436 66.667 1.33 0.00 38.33 4.79
1668 1750 1.686052 CTGCACCATCTAGTCCTCCTC 59.314 57.143 0.00 0.00 0.00 3.71
1670 1752 1.781786 TCTGCACCATCTAGTCCTCC 58.218 55.000 0.00 0.00 0.00 4.30
1671 1753 2.763448 AGTTCTGCACCATCTAGTCCTC 59.237 50.000 0.00 0.00 0.00 3.71
1674 1756 2.234908 ACCAGTTCTGCACCATCTAGTC 59.765 50.000 0.00 0.00 0.00 2.59
1675 1757 2.027745 CACCAGTTCTGCACCATCTAGT 60.028 50.000 0.00 0.00 0.00 2.57
1677 1759 1.339055 GCACCAGTTCTGCACCATCTA 60.339 52.381 0.00 0.00 34.56 1.98
1678 1760 0.607489 GCACCAGTTCTGCACCATCT 60.607 55.000 0.00 0.00 34.56 2.90
1686 1768 1.241165 TGATTGCTGCACCAGTTCTG 58.759 50.000 0.00 0.00 33.43 3.02
1691 1773 0.245539 CCCTTTGATTGCTGCACCAG 59.754 55.000 0.00 0.00 34.12 4.00
1695 1777 0.961019 GACACCCTTTGATTGCTGCA 59.039 50.000 0.00 0.00 0.00 4.41
1706 1788 2.596851 ATGCAGGCTCGACACCCTT 61.597 57.895 0.00 0.00 0.00 3.95
1711 1793 1.668793 CACACATGCAGGCTCGACA 60.669 57.895 0.00 0.00 0.00 4.35
1712 1794 3.171987 CACACATGCAGGCTCGAC 58.828 61.111 0.00 0.00 0.00 4.20
1746 1836 5.690857 GGTAGACGGACTGCAATCTTATTAC 59.309 44.000 0.00 0.00 32.90 1.89
1750 1840 3.362706 AGGTAGACGGACTGCAATCTTA 58.637 45.455 0.00 0.00 32.90 2.10
1751 1841 2.180276 AGGTAGACGGACTGCAATCTT 58.820 47.619 0.00 0.00 32.90 2.40
1752 1842 1.853963 AGGTAGACGGACTGCAATCT 58.146 50.000 0.00 0.00 32.90 2.40
1753 1843 2.166664 AGAAGGTAGACGGACTGCAATC 59.833 50.000 0.00 0.00 32.90 2.67
1754 1844 2.093973 CAGAAGGTAGACGGACTGCAAT 60.094 50.000 0.00 0.00 32.90 3.56
1755 1845 1.272490 CAGAAGGTAGACGGACTGCAA 59.728 52.381 0.00 0.00 32.90 4.08
1756 1846 0.888619 CAGAAGGTAGACGGACTGCA 59.111 55.000 0.00 0.00 32.90 4.41
1757 1847 0.458716 GCAGAAGGTAGACGGACTGC 60.459 60.000 0.00 0.00 42.44 4.40
1758 1848 0.173708 GGCAGAAGGTAGACGGACTG 59.826 60.000 0.00 0.00 0.00 3.51
1759 1849 0.251653 TGGCAGAAGGTAGACGGACT 60.252 55.000 0.00 0.00 0.00 3.85
1760 1850 0.824759 ATGGCAGAAGGTAGACGGAC 59.175 55.000 0.00 0.00 0.00 4.79
1761 1851 1.207089 CAATGGCAGAAGGTAGACGGA 59.793 52.381 0.00 0.00 0.00 4.69
1762 1852 1.656652 CAATGGCAGAAGGTAGACGG 58.343 55.000 0.00 0.00 0.00 4.79
1763 1853 1.009829 GCAATGGCAGAAGGTAGACG 58.990 55.000 0.00 0.00 40.72 4.18
1764 1854 2.409948 AGCAATGGCAGAAGGTAGAC 57.590 50.000 0.00 0.00 44.61 2.59
1765 1855 3.181451 CCATAGCAATGGCAGAAGGTAGA 60.181 47.826 0.00 0.00 46.17 2.59
1766 1856 3.144506 CCATAGCAATGGCAGAAGGTAG 58.855 50.000 0.00 0.00 46.17 3.18
1767 1857 3.213206 CCATAGCAATGGCAGAAGGTA 57.787 47.619 0.00 0.00 46.17 3.08
1768 1858 2.062971 CCATAGCAATGGCAGAAGGT 57.937 50.000 0.00 0.00 46.17 3.50
1778 1868 9.856162 TGCATGATGATTATATACCATAGCAAT 57.144 29.630 0.00 0.00 0.00 3.56
1779 1869 9.856162 ATGCATGATGATTATATACCATAGCAA 57.144 29.630 0.00 6.58 31.47 3.91
1780 1870 9.498176 GATGCATGATGATTATATACCATAGCA 57.502 33.333 2.46 14.15 31.90 3.49
1781 1871 9.722184 AGATGCATGATGATTATATACCATAGC 57.278 33.333 2.46 0.00 0.00 2.97
1784 1874 9.269453 CGAAGATGCATGATGATTATATACCAT 57.731 33.333 2.46 0.00 0.00 3.55
1785 1875 8.260114 ACGAAGATGCATGATGATTATATACCA 58.740 33.333 2.46 0.00 0.00 3.25
1786 1876 8.654230 ACGAAGATGCATGATGATTATATACC 57.346 34.615 2.46 0.00 0.00 2.73
1787 1877 9.526713 AGACGAAGATGCATGATGATTATATAC 57.473 33.333 2.46 0.00 0.00 1.47
1793 1883 9.096160 GATATAAGACGAAGATGCATGATGATT 57.904 33.333 2.46 0.00 0.00 2.57
1794 1884 7.434602 CGATATAAGACGAAGATGCATGATGAT 59.565 37.037 2.46 0.00 0.00 2.45
1795 1885 6.749118 CGATATAAGACGAAGATGCATGATGA 59.251 38.462 2.46 0.00 0.00 2.92
1796 1886 6.529477 ACGATATAAGACGAAGATGCATGATG 59.471 38.462 2.46 0.00 0.00 3.07
1797 1887 6.625362 ACGATATAAGACGAAGATGCATGAT 58.375 36.000 2.46 0.00 0.00 2.45
1798 1888 6.013842 ACGATATAAGACGAAGATGCATGA 57.986 37.500 2.46 0.00 0.00 3.07
1799 1889 6.584184 AGAACGATATAAGACGAAGATGCATG 59.416 38.462 2.46 0.00 0.00 4.06
1800 1890 6.584184 CAGAACGATATAAGACGAAGATGCAT 59.416 38.462 0.00 0.00 0.00 3.96
1801 1891 5.915196 CAGAACGATATAAGACGAAGATGCA 59.085 40.000 0.00 0.00 0.00 3.96
1802 1892 6.143496 TCAGAACGATATAAGACGAAGATGC 58.857 40.000 0.00 0.00 0.00 3.91
1803 1893 7.113684 GGTTCAGAACGATATAAGACGAAGATG 59.886 40.741 7.22 0.00 0.00 2.90
1804 1894 7.013464 AGGTTCAGAACGATATAAGACGAAGAT 59.987 37.037 7.22 0.00 0.00 2.40
1805 1895 6.318144 AGGTTCAGAACGATATAAGACGAAGA 59.682 38.462 7.22 0.00 0.00 2.87
1806 1896 6.496571 AGGTTCAGAACGATATAAGACGAAG 58.503 40.000 7.22 0.00 0.00 3.79
1807 1897 6.446781 AGGTTCAGAACGATATAAGACGAA 57.553 37.500 7.22 0.00 0.00 3.85
1808 1898 6.127814 ACAAGGTTCAGAACGATATAAGACGA 60.128 38.462 7.22 0.00 0.00 4.20
1809 1899 6.034591 ACAAGGTTCAGAACGATATAAGACG 58.965 40.000 7.22 0.00 0.00 4.18
1810 1900 7.829378 AACAAGGTTCAGAACGATATAAGAC 57.171 36.000 7.22 0.00 0.00 3.01
1811 1901 7.148474 GCAAACAAGGTTCAGAACGATATAAGA 60.148 37.037 7.22 0.00 0.00 2.10
1812 1902 6.961554 GCAAACAAGGTTCAGAACGATATAAG 59.038 38.462 7.22 0.00 0.00 1.73
1813 1903 6.428465 TGCAAACAAGGTTCAGAACGATATAA 59.572 34.615 7.22 0.00 0.00 0.98
1814 1904 5.935206 TGCAAACAAGGTTCAGAACGATATA 59.065 36.000 7.22 0.00 0.00 0.86
1815 1905 4.759693 TGCAAACAAGGTTCAGAACGATAT 59.240 37.500 7.22 0.00 0.00 1.63
1816 1906 4.130857 TGCAAACAAGGTTCAGAACGATA 58.869 39.130 7.22 0.00 0.00 2.92
1817 1907 2.948979 TGCAAACAAGGTTCAGAACGAT 59.051 40.909 7.22 0.00 0.00 3.73
1818 1908 2.360844 TGCAAACAAGGTTCAGAACGA 58.639 42.857 7.22 0.00 0.00 3.85
1819 1909 2.842208 TGCAAACAAGGTTCAGAACG 57.158 45.000 7.22 0.00 0.00 3.95
1833 1923 6.595326 CAGGAATCATCAGTACTAGTTGCAAA 59.405 38.462 0.00 0.00 0.00 3.68
1834 1924 6.108687 CAGGAATCATCAGTACTAGTTGCAA 58.891 40.000 0.00 0.00 0.00 4.08
1835 1925 5.395657 CCAGGAATCATCAGTACTAGTTGCA 60.396 44.000 0.00 0.00 0.00 4.08
1836 1926 5.053145 CCAGGAATCATCAGTACTAGTTGC 58.947 45.833 0.00 0.00 0.00 4.17
1837 1927 6.045318 CACCAGGAATCATCAGTACTAGTTG 58.955 44.000 0.00 0.00 0.00 3.16
1838 1928 5.721960 ACACCAGGAATCATCAGTACTAGTT 59.278 40.000 0.00 0.00 0.00 2.24
1839 1929 5.127845 CACACCAGGAATCATCAGTACTAGT 59.872 44.000 0.00 0.00 0.00 2.57
1840 1930 5.127845 ACACACCAGGAATCATCAGTACTAG 59.872 44.000 0.00 0.00 0.00 2.57
1841 1931 5.023452 ACACACCAGGAATCATCAGTACTA 58.977 41.667 0.00 0.00 0.00 1.82
1842 1932 3.840666 ACACACCAGGAATCATCAGTACT 59.159 43.478 0.00 0.00 0.00 2.73
1843 1933 4.207891 ACACACCAGGAATCATCAGTAC 57.792 45.455 0.00 0.00 0.00 2.73
1844 1934 4.908601 AACACACCAGGAATCATCAGTA 57.091 40.909 0.00 0.00 0.00 2.74
1845 1935 3.795688 AACACACCAGGAATCATCAGT 57.204 42.857 0.00 0.00 0.00 3.41
1846 1936 5.458041 AAAAACACACCAGGAATCATCAG 57.542 39.130 0.00 0.00 0.00 2.90
1902 1992 3.766151 TCGACATCCAATCGTACTTCAC 58.234 45.455 0.00 0.00 40.50 3.18
1903 1993 3.442625 ACTCGACATCCAATCGTACTTCA 59.557 43.478 0.00 0.00 40.50 3.02
1904 1994 4.030134 ACTCGACATCCAATCGTACTTC 57.970 45.455 0.00 0.00 40.50 3.01
1905 1995 4.082408 TCAACTCGACATCCAATCGTACTT 60.082 41.667 0.00 0.00 40.50 2.24
1906 1996 3.442625 TCAACTCGACATCCAATCGTACT 59.557 43.478 0.00 0.00 40.50 2.73
1907 1997 3.766151 TCAACTCGACATCCAATCGTAC 58.234 45.455 0.00 0.00 40.50 3.67
1908 1998 4.171005 GTTCAACTCGACATCCAATCGTA 58.829 43.478 0.00 0.00 40.50 3.43
1909 1999 2.993899 GTTCAACTCGACATCCAATCGT 59.006 45.455 0.00 0.00 40.50 3.73
1910 2000 2.993220 TGTTCAACTCGACATCCAATCG 59.007 45.455 0.00 0.00 41.00 3.34
1911 2001 3.997021 AGTGTTCAACTCGACATCCAATC 59.003 43.478 0.00 0.00 31.64 2.67
1912 2002 4.008074 AGTGTTCAACTCGACATCCAAT 57.992 40.909 0.00 0.00 31.64 3.16
1913 2003 3.469008 AGTGTTCAACTCGACATCCAA 57.531 42.857 0.00 0.00 31.64 3.53
1914 2004 3.469008 AAGTGTTCAACTCGACATCCA 57.531 42.857 0.00 0.00 38.56 3.41
1915 2005 4.748102 TGTAAAGTGTTCAACTCGACATCC 59.252 41.667 0.00 0.00 38.56 3.51
1916 2006 5.609696 CGTGTAAAGTGTTCAACTCGACATC 60.610 44.000 0.00 0.00 38.56 3.06
1917 2007 4.208460 CGTGTAAAGTGTTCAACTCGACAT 59.792 41.667 0.00 0.00 38.56 3.06
1918 2008 3.548668 CGTGTAAAGTGTTCAACTCGACA 59.451 43.478 0.00 0.00 38.56 4.35
1919 2009 3.060740 CCGTGTAAAGTGTTCAACTCGAC 60.061 47.826 0.00 0.00 38.56 4.20
1920 2010 3.117794 CCGTGTAAAGTGTTCAACTCGA 58.882 45.455 0.00 0.00 38.56 4.04
1921 2011 2.220133 CCCGTGTAAAGTGTTCAACTCG 59.780 50.000 0.00 0.00 38.56 4.18
1922 2012 3.460103 TCCCGTGTAAAGTGTTCAACTC 58.540 45.455 0.00 0.00 38.56 3.01
1923 2013 3.547054 TCCCGTGTAAAGTGTTCAACT 57.453 42.857 0.00 0.00 42.60 3.16
1924 2014 3.242837 GGTTCCCGTGTAAAGTGTTCAAC 60.243 47.826 0.00 0.00 0.00 3.18
1925 2015 2.944349 GGTTCCCGTGTAAAGTGTTCAA 59.056 45.455 0.00 0.00 0.00 2.69
1926 2016 2.563702 GGTTCCCGTGTAAAGTGTTCA 58.436 47.619 0.00 0.00 0.00 3.18
1927 2017 1.528161 CGGTTCCCGTGTAAAGTGTTC 59.472 52.381 0.00 0.00 42.73 3.18
1928 2018 1.585297 CGGTTCCCGTGTAAAGTGTT 58.415 50.000 0.00 0.00 42.73 3.32
1929 2019 0.249996 CCGGTTCCCGTGTAAAGTGT 60.250 55.000 0.00 0.00 46.80 3.55
1930 2020 0.249996 ACCGGTTCCCGTGTAAAGTG 60.250 55.000 0.00 0.00 46.80 3.16
1931 2021 0.033920 GACCGGTTCCCGTGTAAAGT 59.966 55.000 9.42 0.00 46.80 2.66
1932 2022 0.671472 GGACCGGTTCCCGTGTAAAG 60.671 60.000 9.42 0.00 46.80 1.85
1933 2023 1.370810 GGACCGGTTCCCGTGTAAA 59.629 57.895 9.42 0.00 46.80 2.01
1934 2024 2.929903 CGGACCGGTTCCCGTGTAA 61.930 63.158 23.06 0.00 46.80 2.41
1935 2025 3.372730 CGGACCGGTTCCCGTGTA 61.373 66.667 23.06 0.00 46.80 2.90
1954 2044 3.073735 AGAGCTGCCGAGTCCTGG 61.074 66.667 0.00 0.00 0.00 4.45
1955 2045 2.346541 TGAGAGCTGCCGAGTCCTG 61.347 63.158 0.00 0.00 0.00 3.86
1956 2046 2.036414 TGAGAGCTGCCGAGTCCT 59.964 61.111 0.00 0.00 0.00 3.85
1957 2047 2.183046 GTGAGAGCTGCCGAGTCC 59.817 66.667 0.00 0.00 0.00 3.85
1958 2048 2.202544 CGTGAGAGCTGCCGAGTC 60.203 66.667 0.00 0.00 0.00 3.36
1959 2049 3.753434 CCGTGAGAGCTGCCGAGT 61.753 66.667 0.00 0.00 0.00 4.18
1960 2050 4.504916 CCCGTGAGAGCTGCCGAG 62.505 72.222 0.00 0.00 0.00 4.63
1962 2052 3.781770 GATCCCGTGAGAGCTGCCG 62.782 68.421 0.00 0.00 0.00 5.69
1963 2053 2.107953 GATCCCGTGAGAGCTGCC 59.892 66.667 0.00 0.00 0.00 4.85
1964 2054 2.081425 ATCGATCCCGTGAGAGCTGC 62.081 60.000 0.00 0.00 37.05 5.25
1965 2055 0.318529 CATCGATCCCGTGAGAGCTG 60.319 60.000 0.00 0.00 37.05 4.24
1966 2056 2.037053 CATCGATCCCGTGAGAGCT 58.963 57.895 0.00 0.00 37.05 4.09
1967 2057 1.663074 GCATCGATCCCGTGAGAGC 60.663 63.158 0.00 0.00 37.05 4.09
1968 2058 0.596083 GTGCATCGATCCCGTGAGAG 60.596 60.000 0.00 0.00 37.05 3.20
1969 2059 1.319614 TGTGCATCGATCCCGTGAGA 61.320 55.000 0.00 0.00 37.05 3.27
1970 2060 0.460109 TTGTGCATCGATCCCGTGAG 60.460 55.000 0.00 0.00 37.05 3.51
1971 2061 0.177836 ATTGTGCATCGATCCCGTGA 59.822 50.000 0.00 0.00 37.05 4.35
1972 2062 1.003545 GAATTGTGCATCGATCCCGTG 60.004 52.381 0.00 0.00 37.05 4.94
1973 2063 1.299541 GAATTGTGCATCGATCCCGT 58.700 50.000 0.00 0.00 37.05 5.28
1974 2064 0.233074 CGAATTGTGCATCGATCCCG 59.767 55.000 1.16 0.82 41.43 5.14
1975 2065 1.581934 TCGAATTGTGCATCGATCCC 58.418 50.000 6.05 0.00 42.61 3.85
1979 2069 2.425668 TCTAGGTCGAATTGTGCATCGA 59.574 45.455 6.05 6.05 45.01 3.59
1980 2070 2.535984 GTCTAGGTCGAATTGTGCATCG 59.464 50.000 0.98 0.98 40.31 3.84
1981 2071 3.786635 AGTCTAGGTCGAATTGTGCATC 58.213 45.455 0.00 0.00 0.00 3.91
1982 2072 3.735208 CGAGTCTAGGTCGAATTGTGCAT 60.735 47.826 9.14 0.00 39.92 3.96
1983 2073 2.415491 CGAGTCTAGGTCGAATTGTGCA 60.415 50.000 9.14 0.00 39.92 4.57
1984 2074 2.159421 TCGAGTCTAGGTCGAATTGTGC 60.159 50.000 13.66 0.00 43.26 4.57
1985 2075 3.759527 TCGAGTCTAGGTCGAATTGTG 57.240 47.619 13.66 0.00 43.26 3.33
1991 2081 3.170791 ACGTATTCGAGTCTAGGTCGA 57.829 47.619 12.43 12.43 44.48 4.20
1992 2082 3.121529 CGTACGTATTCGAGTCTAGGTCG 60.122 52.174 7.22 8.62 40.62 4.79
1993 2083 3.183373 CCGTACGTATTCGAGTCTAGGTC 59.817 52.174 15.21 0.00 40.62 3.85
1994 2084 3.126831 CCGTACGTATTCGAGTCTAGGT 58.873 50.000 15.21 0.00 40.62 3.08
1995 2085 3.183373 GTCCGTACGTATTCGAGTCTAGG 59.817 52.174 15.21 0.00 40.62 3.02
1996 2086 3.121529 CGTCCGTACGTATTCGAGTCTAG 60.122 52.174 15.21 0.00 44.21 2.43
1997 2087 2.789339 CGTCCGTACGTATTCGAGTCTA 59.211 50.000 15.21 0.00 44.21 2.59
1998 2088 1.590238 CGTCCGTACGTATTCGAGTCT 59.410 52.381 15.21 0.00 44.21 3.24
1999 2089 1.997151 CGTCCGTACGTATTCGAGTC 58.003 55.000 15.21 0.00 44.21 3.36
2010 2100 2.612212 TCGGTATTTAGTCCGTCCGTAC 59.388 50.000 3.64 0.00 45.88 3.67
2011 2101 2.912771 TCGGTATTTAGTCCGTCCGTA 58.087 47.619 3.64 0.00 45.88 4.02
2012 2102 1.750193 TCGGTATTTAGTCCGTCCGT 58.250 50.000 3.64 0.00 45.88 4.69
2013 2103 2.849880 TTCGGTATTTAGTCCGTCCG 57.150 50.000 3.64 0.00 45.88 4.79
2014 2104 4.330894 CCTTTTTCGGTATTTAGTCCGTCC 59.669 45.833 3.64 0.00 45.88 4.79
2015 2105 4.931601 ACCTTTTTCGGTATTTAGTCCGTC 59.068 41.667 3.64 0.00 45.88 4.79
2016 2106 4.898320 ACCTTTTTCGGTATTTAGTCCGT 58.102 39.130 3.64 0.00 45.88 4.69
2017 2107 5.868043 AACCTTTTTCGGTATTTAGTCCG 57.132 39.130 0.00 0.00 46.93 4.79
2018 2108 6.798476 CGAAAACCTTTTTCGGTATTTAGTCC 59.202 38.462 20.78 0.00 45.17 3.85
2019 2109 7.771219 CGAAAACCTTTTTCGGTATTTAGTC 57.229 36.000 20.78 0.00 45.17 2.59
2038 2128 5.831702 TTATTTATAAAGCGGGGCGAAAA 57.168 34.783 3.94 0.00 0.00 2.29
2126 2216 6.650120 CCCTCAGCAGAACCTTAATACTTTA 58.350 40.000 0.00 0.00 0.00 1.85
2196 2286 0.741326 TGACTAGATCGCCTGCACTC 59.259 55.000 0.00 0.00 0.00 3.51
2281 2371 1.686325 GGGACGCCATCTCTGCCTTA 61.686 60.000 0.00 0.00 0.00 2.69
2544 2634 1.163554 GTTCCTCTGGAGCTGCTTTG 58.836 55.000 6.82 0.00 31.21 2.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.