Multiple sequence alignment - TraesCS6B01G419300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G419300 chr6B 100.000 2356 0 0 1 2356 691024193 691026548 0.000000e+00 4351.0
1 TraesCS6B01G419300 chr6B 76.923 689 115 26 791 1458 690969220 690969885 3.730000e-93 351.0
2 TraesCS6B01G419300 chr6B 86.425 221 25 3 314 530 153363576 153363357 1.090000e-58 237.0
3 TraesCS6B01G419300 chr6B 84.536 97 15 0 1504 1600 690995164 690995260 1.930000e-16 97.1
4 TraesCS6B01G419300 chr6A 91.944 931 39 13 434 1355 600744528 600745431 0.000000e+00 1271.0
5 TraesCS6B01G419300 chr6A 90.411 438 28 6 3 438 600727815 600728240 4.400000e-157 564.0
6 TraesCS6B01G419300 chr6A 87.273 275 15 9 1488 1749 600745663 600745930 1.770000e-76 296.0
7 TraesCS6B01G419300 chr6A 84.083 289 37 8 6 292 575470520 575470239 1.070000e-68 270.0
8 TraesCS6B01G419300 chr6A 92.857 98 3 1 1370 1467 600745582 600745675 3.160000e-29 139.0
9 TraesCS6B01G419300 chr7B 98.540 548 8 0 1809 2356 585469202 585468655 0.000000e+00 968.0
10 TraesCS6B01G419300 chr7B 96.552 551 19 0 1806 2356 672406444 672405894 0.000000e+00 913.0
11 TraesCS6B01G419300 chr7B 86.594 552 70 4 1806 2356 590443709 590443161 7.200000e-170 606.0
12 TraesCS6B01G419300 chr7B 85.053 281 28 9 3 280 88242054 88241785 8.300000e-70 274.0
13 TraesCS6B01G419300 chr5B 97.989 547 11 0 1810 2356 109215368 109215914 0.000000e+00 950.0
14 TraesCS6B01G419300 chr5B 85.034 294 31 7 3 292 662395100 662394816 1.070000e-73 287.0
15 TraesCS6B01G419300 chr4A 97.473 554 14 0 1803 2356 720805401 720805954 0.000000e+00 946.0
16 TraesCS6B01G419300 chr1A 96.029 554 22 0 1803 2356 438301695 438302248 0.000000e+00 902.0
17 TraesCS6B01G419300 chr1B 93.863 554 33 1 1803 2356 595695342 595695894 0.000000e+00 833.0
18 TraesCS6B01G419300 chr2A 87.681 552 67 1 1802 2353 40478477 40479027 1.970000e-180 641.0
19 TraesCS6B01G419300 chr2A 78.049 246 46 6 292 531 5592595 5592352 5.250000e-32 148.0
20 TraesCS6B01G419300 chr2D 85.612 556 76 4 1803 2356 341704297 341704850 4.360000e-162 580.0
21 TraesCS6B01G419300 chr2D 86.404 228 21 5 311 529 519904840 519904614 8.410000e-60 241.0
22 TraesCS6B01G419300 chr7A 86.007 293 30 7 3 292 37972805 37972521 1.060000e-78 303.0
23 TraesCS6B01G419300 chr1D 85.274 292 30 8 4 291 383717622 383717340 2.960000e-74 289.0
24 TraesCS6B01G419300 chr4B 84.983 293 30 9 3 291 386978029 386977747 3.830000e-73 285.0
25 TraesCS6B01G419300 chr4B 83.502 297 37 7 3 296 34443957 34444244 1.390000e-67 267.0
26 TraesCS6B01G419300 chr3D 84.642 293 34 7 3 292 181588099 181588383 4.960000e-72 281.0
27 TraesCS6B01G419300 chr3D 84.783 230 30 3 304 529 437947829 437947601 2.360000e-55 226.0
28 TraesCS6B01G419300 chr3D 97.143 35 1 0 1369 1403 109306659 109306693 2.530000e-05 60.2
29 TraesCS6B01G419300 chr2B 84.068 295 35 8 5 296 417657655 417657940 8.300000e-70 274.0
30 TraesCS6B01G419300 chr2B 85.306 245 24 9 295 530 449130878 449131119 2.340000e-60 243.0
31 TraesCS6B01G419300 chr2B 84.649 228 25 5 311 529 611756917 611756691 3.940000e-53 219.0
32 TraesCS6B01G419300 chr7D 86.842 228 21 7 308 529 4146522 4146298 1.810000e-61 246.0
33 TraesCS6B01G419300 chr3B 85.778 225 27 3 304 524 573301974 573301751 1.410000e-57 233.0
34 TraesCS6B01G419300 chr3B 84.348 230 29 5 305 530 101782976 101783202 3.940000e-53 219.0
35 TraesCS6B01G419300 chr6D 86.957 92 8 1 1370 1461 454509471 454509558 1.490000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G419300 chr6B 691024193 691026548 2355 False 4351.000000 4351 100.000000 1 2356 1 chr6B.!!$F3 2355
1 TraesCS6B01G419300 chr6B 690969220 690969885 665 False 351.000000 351 76.923000 791 1458 1 chr6B.!!$F1 667
2 TraesCS6B01G419300 chr6A 600744528 600745930 1402 False 568.666667 1271 90.691333 434 1749 3 chr6A.!!$F2 1315
3 TraesCS6B01G419300 chr7B 585468655 585469202 547 True 968.000000 968 98.540000 1809 2356 1 chr7B.!!$R2 547
4 TraesCS6B01G419300 chr7B 672405894 672406444 550 True 913.000000 913 96.552000 1806 2356 1 chr7B.!!$R4 550
5 TraesCS6B01G419300 chr7B 590443161 590443709 548 True 606.000000 606 86.594000 1806 2356 1 chr7B.!!$R3 550
6 TraesCS6B01G419300 chr5B 109215368 109215914 546 False 950.000000 950 97.989000 1810 2356 1 chr5B.!!$F1 546
7 TraesCS6B01G419300 chr4A 720805401 720805954 553 False 946.000000 946 97.473000 1803 2356 1 chr4A.!!$F1 553
8 TraesCS6B01G419300 chr1A 438301695 438302248 553 False 902.000000 902 96.029000 1803 2356 1 chr1A.!!$F1 553
9 TraesCS6B01G419300 chr1B 595695342 595695894 552 False 833.000000 833 93.863000 1803 2356 1 chr1B.!!$F1 553
10 TraesCS6B01G419300 chr2A 40478477 40479027 550 False 641.000000 641 87.681000 1802 2353 1 chr2A.!!$F1 551
11 TraesCS6B01G419300 chr2D 341704297 341704850 553 False 580.000000 580 85.612000 1803 2356 1 chr2D.!!$F1 553

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
357 358 0.029035 CGCGCGTATACAACTCCTCT 59.971 55.0 24.19 0.0 0.0 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1765 1939 0.550914 TCTTGGACAACCTGCCACTT 59.449 50.0 0.0 0.0 37.04 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.536316 GAGTCGAGACGCTCCCTA 57.464 61.111 0.00 0.00 36.20 3.53
18 19 2.777969 GAGTCGAGACGCTCCCTAA 58.222 57.895 0.00 0.00 36.20 2.69
19 20 1.093159 GAGTCGAGACGCTCCCTAAA 58.907 55.000 0.00 0.00 36.20 1.85
20 21 1.471684 GAGTCGAGACGCTCCCTAAAA 59.528 52.381 0.00 0.00 36.20 1.52
21 22 1.891150 AGTCGAGACGCTCCCTAAAAA 59.109 47.619 0.00 0.00 36.20 1.94
22 23 1.991264 GTCGAGACGCTCCCTAAAAAC 59.009 52.381 0.00 0.00 0.00 2.43
23 24 1.067354 TCGAGACGCTCCCTAAAAACC 60.067 52.381 2.00 0.00 0.00 3.27
24 25 1.067071 CGAGACGCTCCCTAAAAACCT 60.067 52.381 2.00 0.00 0.00 3.50
25 26 2.612221 CGAGACGCTCCCTAAAAACCTT 60.612 50.000 2.00 0.00 0.00 3.50
26 27 3.367703 CGAGACGCTCCCTAAAAACCTTA 60.368 47.826 2.00 0.00 0.00 2.69
27 28 4.679905 CGAGACGCTCCCTAAAAACCTTAT 60.680 45.833 2.00 0.00 0.00 1.73
28 29 5.175388 AGACGCTCCCTAAAAACCTTATT 57.825 39.130 0.00 0.00 0.00 1.40
29 30 4.941873 AGACGCTCCCTAAAAACCTTATTG 59.058 41.667 0.00 0.00 0.00 1.90
30 31 4.659115 ACGCTCCCTAAAAACCTTATTGT 58.341 39.130 0.00 0.00 0.00 2.71
31 32 4.698780 ACGCTCCCTAAAAACCTTATTGTC 59.301 41.667 0.00 0.00 0.00 3.18
32 33 4.201783 CGCTCCCTAAAAACCTTATTGTCG 60.202 45.833 0.00 0.00 0.00 4.35
33 34 4.698780 GCTCCCTAAAAACCTTATTGTCGT 59.301 41.667 0.00 0.00 0.00 4.34
34 35 5.182570 GCTCCCTAAAAACCTTATTGTCGTT 59.817 40.000 0.00 0.00 0.00 3.85
35 36 6.622245 GCTCCCTAAAAACCTTATTGTCGTTC 60.622 42.308 0.00 0.00 0.00 3.95
36 37 6.536447 TCCCTAAAAACCTTATTGTCGTTCT 58.464 36.000 0.00 0.00 0.00 3.01
37 38 6.652062 TCCCTAAAAACCTTATTGTCGTTCTC 59.348 38.462 0.00 0.00 0.00 2.87
38 39 6.128090 CCCTAAAAACCTTATTGTCGTTCTCC 60.128 42.308 0.00 0.00 0.00 3.71
39 40 5.700722 AAAAACCTTATTGTCGTTCTCCC 57.299 39.130 0.00 0.00 0.00 4.30
40 41 2.667473 ACCTTATTGTCGTTCTCCCG 57.333 50.000 0.00 0.00 0.00 5.14
41 42 1.206371 ACCTTATTGTCGTTCTCCCGG 59.794 52.381 0.00 0.00 0.00 5.73
42 43 1.472728 CCTTATTGTCGTTCTCCCGGG 60.473 57.143 16.85 16.85 0.00 5.73
43 44 0.108041 TTATTGTCGTTCTCCCGGGC 60.108 55.000 18.49 0.00 0.00 6.13
44 45 1.259142 TATTGTCGTTCTCCCGGGCA 61.259 55.000 18.49 2.37 0.00 5.36
45 46 2.521958 ATTGTCGTTCTCCCGGGCAG 62.522 60.000 18.49 14.69 0.00 4.85
46 47 4.452733 GTCGTTCTCCCGGGCAGG 62.453 72.222 18.49 8.73 40.63 4.85
47 48 4.689549 TCGTTCTCCCGGGCAGGA 62.690 66.667 18.49 11.24 45.00 3.86
48 49 3.470888 CGTTCTCCCGGGCAGGAT 61.471 66.667 18.49 0.00 45.00 3.24
49 50 2.506472 GTTCTCCCGGGCAGGATC 59.494 66.667 18.49 9.23 45.00 3.36
50 51 2.066999 GTTCTCCCGGGCAGGATCT 61.067 63.158 18.49 0.00 45.00 2.75
51 52 1.762460 TTCTCCCGGGCAGGATCTC 60.762 63.158 18.49 0.00 45.00 2.75
52 53 3.610669 CTCCCGGGCAGGATCTCG 61.611 72.222 18.49 0.00 45.00 4.04
53 54 4.137615 TCCCGGGCAGGATCTCGA 62.138 66.667 18.49 0.00 45.00 4.04
54 55 3.154473 CCCGGGCAGGATCTCGAA 61.154 66.667 8.08 0.00 45.00 3.71
55 56 2.511452 CCCGGGCAGGATCTCGAAT 61.511 63.158 8.08 0.00 45.00 3.34
56 57 1.301244 CCGGGCAGGATCTCGAATG 60.301 63.158 0.00 0.00 45.00 2.67
57 58 1.742146 CGGGCAGGATCTCGAATGA 59.258 57.895 0.00 0.00 0.00 2.57
58 59 0.598680 CGGGCAGGATCTCGAATGAC 60.599 60.000 0.00 0.00 0.00 3.06
59 60 0.465705 GGGCAGGATCTCGAATGACA 59.534 55.000 0.00 0.00 0.00 3.58
60 61 1.539929 GGGCAGGATCTCGAATGACAG 60.540 57.143 0.00 0.00 0.00 3.51
61 62 1.539929 GGCAGGATCTCGAATGACAGG 60.540 57.143 0.00 0.00 0.00 4.00
62 63 1.539929 GCAGGATCTCGAATGACAGGG 60.540 57.143 0.00 0.00 0.00 4.45
63 64 1.759445 CAGGATCTCGAATGACAGGGT 59.241 52.381 0.00 0.00 0.00 4.34
64 65 2.169352 CAGGATCTCGAATGACAGGGTT 59.831 50.000 0.00 0.00 0.00 4.11
65 66 2.432510 AGGATCTCGAATGACAGGGTTC 59.567 50.000 0.00 0.00 0.00 3.62
66 67 2.483889 GGATCTCGAATGACAGGGTTCC 60.484 54.545 0.00 0.00 0.00 3.62
67 68 0.530744 TCTCGAATGACAGGGTTCCG 59.469 55.000 0.00 0.00 0.00 4.30
68 69 0.460284 CTCGAATGACAGGGTTCCGG 60.460 60.000 0.00 0.00 0.00 5.14
69 70 0.901114 TCGAATGACAGGGTTCCGGA 60.901 55.000 0.00 0.00 0.00 5.14
70 71 0.460284 CGAATGACAGGGTTCCGGAG 60.460 60.000 3.34 0.00 0.00 4.63
82 83 3.787001 CCGGAGGCACCTTCTCCC 61.787 72.222 0.00 0.00 46.14 4.30
83 84 3.003173 CGGAGGCACCTTCTCCCA 61.003 66.667 0.00 0.00 46.01 4.37
84 85 2.671682 GGAGGCACCTTCTCCCAC 59.328 66.667 0.00 0.00 43.71 4.61
85 86 2.266055 GAGGCACCTTCTCCCACG 59.734 66.667 0.00 0.00 0.00 4.94
86 87 2.203788 AGGCACCTTCTCCCACGA 60.204 61.111 0.00 0.00 0.00 4.35
87 88 2.047179 GGCACCTTCTCCCACGAC 60.047 66.667 0.00 0.00 0.00 4.34
88 89 2.047179 GCACCTTCTCCCACGACC 60.047 66.667 0.00 0.00 0.00 4.79
89 90 2.879233 GCACCTTCTCCCACGACCA 61.879 63.158 0.00 0.00 0.00 4.02
90 91 1.752198 CACCTTCTCCCACGACCAA 59.248 57.895 0.00 0.00 0.00 3.67
91 92 0.602905 CACCTTCTCCCACGACCAAC 60.603 60.000 0.00 0.00 0.00 3.77
92 93 1.003718 CCTTCTCCCACGACCAACC 60.004 63.158 0.00 0.00 0.00 3.77
93 94 1.752198 CTTCTCCCACGACCAACCA 59.248 57.895 0.00 0.00 0.00 3.67
94 95 0.324943 CTTCTCCCACGACCAACCAT 59.675 55.000 0.00 0.00 0.00 3.55
95 96 0.036164 TTCTCCCACGACCAACCATG 59.964 55.000 0.00 0.00 0.00 3.66
96 97 2.033448 TCCCACGACCAACCATGC 59.967 61.111 0.00 0.00 0.00 4.06
97 98 2.282110 CCCACGACCAACCATGCA 60.282 61.111 0.00 0.00 0.00 3.96
98 99 2.625823 CCCACGACCAACCATGCAC 61.626 63.158 0.00 0.00 0.00 4.57
99 100 2.555782 CACGACCAACCATGCACG 59.444 61.111 0.00 0.00 0.00 5.34
100 101 3.353836 ACGACCAACCATGCACGC 61.354 61.111 0.00 0.00 0.00 5.34
101 102 4.444024 CGACCAACCATGCACGCG 62.444 66.667 3.53 3.53 0.00 6.01
102 103 4.101790 GACCAACCATGCACGCGG 62.102 66.667 12.47 0.00 0.00 6.46
103 104 4.947147 ACCAACCATGCACGCGGT 62.947 61.111 12.47 0.00 36.98 5.68
104 105 4.101790 CCAACCATGCACGCGGTC 62.102 66.667 12.47 1.21 33.17 4.79
105 106 4.444024 CAACCATGCACGCGGTCG 62.444 66.667 12.47 0.00 42.43 4.79
117 118 4.266070 CGGTCGTCGGGATGCGAT 62.266 66.667 0.00 0.00 39.38 4.58
118 119 2.106332 GGTCGTCGGGATGCGATT 59.894 61.111 0.00 0.00 39.38 3.34
119 120 2.237751 GGTCGTCGGGATGCGATTG 61.238 63.158 0.00 0.00 39.38 2.67
120 121 2.584970 TCGTCGGGATGCGATTGC 60.585 61.111 0.00 0.00 43.20 3.56
121 122 3.640000 CGTCGGGATGCGATTGCC 61.640 66.667 1.50 0.00 41.78 4.52
125 126 3.025619 GGGATGCGATTGCCGAAG 58.974 61.111 1.50 0.00 41.78 3.79
126 127 2.329339 GGATGCGATTGCCGAAGC 59.671 61.111 1.50 0.00 41.78 3.86
136 137 3.999821 TGCCGAAGCAGTTCACTAA 57.000 47.368 0.00 0.00 46.52 2.24
137 138 1.795768 TGCCGAAGCAGTTCACTAAG 58.204 50.000 0.00 0.00 46.52 2.18
138 139 1.343142 TGCCGAAGCAGTTCACTAAGA 59.657 47.619 0.00 0.00 46.52 2.10
139 140 1.996191 GCCGAAGCAGTTCACTAAGAG 59.004 52.381 0.00 0.00 39.53 2.85
140 141 2.611518 CCGAAGCAGTTCACTAAGAGG 58.388 52.381 0.00 0.00 32.36 3.69
141 142 2.231478 CCGAAGCAGTTCACTAAGAGGA 59.769 50.000 0.00 0.00 32.36 3.71
142 143 3.306088 CCGAAGCAGTTCACTAAGAGGAA 60.306 47.826 0.00 0.00 32.36 3.36
143 144 3.675698 CGAAGCAGTTCACTAAGAGGAAC 59.324 47.826 0.00 0.00 42.82 3.62
144 145 4.632153 GAAGCAGTTCACTAAGAGGAACA 58.368 43.478 7.20 0.00 44.46 3.18
145 146 4.264460 AGCAGTTCACTAAGAGGAACAG 57.736 45.455 7.20 0.70 44.46 3.16
146 147 3.643792 AGCAGTTCACTAAGAGGAACAGT 59.356 43.478 7.20 0.00 44.46 3.55
147 148 4.833380 AGCAGTTCACTAAGAGGAACAGTA 59.167 41.667 7.20 0.00 44.46 2.74
148 149 5.047660 AGCAGTTCACTAAGAGGAACAGTAG 60.048 44.000 7.20 0.00 44.46 2.57
149 150 5.047943 GCAGTTCACTAAGAGGAACAGTAGA 60.048 44.000 7.20 0.00 44.46 2.59
150 151 6.350612 GCAGTTCACTAAGAGGAACAGTAGAT 60.351 42.308 7.20 0.00 44.46 1.98
151 152 7.032580 CAGTTCACTAAGAGGAACAGTAGATG 58.967 42.308 7.20 0.00 44.46 2.90
152 153 6.948886 AGTTCACTAAGAGGAACAGTAGATGA 59.051 38.462 7.20 0.00 44.46 2.92
153 154 6.761099 TCACTAAGAGGAACAGTAGATGAC 57.239 41.667 0.00 0.00 0.00 3.06
154 155 6.246163 TCACTAAGAGGAACAGTAGATGACA 58.754 40.000 0.00 0.00 0.00 3.58
155 156 6.375736 TCACTAAGAGGAACAGTAGATGACAG 59.624 42.308 0.00 0.00 0.00 3.51
156 157 4.464069 AAGAGGAACAGTAGATGACAGC 57.536 45.455 0.00 0.00 0.00 4.40
157 158 3.707316 AGAGGAACAGTAGATGACAGCT 58.293 45.455 0.00 0.00 0.00 4.24
158 159 4.861196 AGAGGAACAGTAGATGACAGCTA 58.139 43.478 0.00 0.00 0.00 3.32
159 160 4.887071 AGAGGAACAGTAGATGACAGCTAG 59.113 45.833 0.00 0.00 0.00 3.42
160 161 3.957497 AGGAACAGTAGATGACAGCTAGG 59.043 47.826 0.00 0.00 0.00 3.02
161 162 3.068873 GGAACAGTAGATGACAGCTAGGG 59.931 52.174 0.00 0.00 0.00 3.53
162 163 3.390175 ACAGTAGATGACAGCTAGGGT 57.610 47.619 0.00 0.00 0.00 4.34
163 164 3.714144 ACAGTAGATGACAGCTAGGGTT 58.286 45.455 0.00 0.00 0.00 4.11
164 165 4.868268 ACAGTAGATGACAGCTAGGGTTA 58.132 43.478 0.00 0.00 0.00 2.85
165 166 4.890581 ACAGTAGATGACAGCTAGGGTTAG 59.109 45.833 0.00 0.00 0.00 2.34
166 167 4.279671 CAGTAGATGACAGCTAGGGTTAGG 59.720 50.000 0.00 0.00 0.00 2.69
167 168 2.683768 AGATGACAGCTAGGGTTAGGG 58.316 52.381 0.00 0.00 0.00 3.53
168 169 2.022918 AGATGACAGCTAGGGTTAGGGT 60.023 50.000 0.00 0.00 0.00 4.34
169 170 2.337359 TGACAGCTAGGGTTAGGGTT 57.663 50.000 0.00 0.00 0.00 4.11
170 171 1.906574 TGACAGCTAGGGTTAGGGTTG 59.093 52.381 0.00 0.00 0.00 3.77
171 172 1.907255 GACAGCTAGGGTTAGGGTTGT 59.093 52.381 0.00 0.00 0.00 3.32
172 173 1.628846 ACAGCTAGGGTTAGGGTTGTG 59.371 52.381 0.00 0.00 0.00 3.33
173 174 0.618981 AGCTAGGGTTAGGGTTGTGC 59.381 55.000 0.00 0.00 0.00 4.57
174 175 0.326927 GCTAGGGTTAGGGTTGTGCA 59.673 55.000 0.00 0.00 0.00 4.57
175 176 1.679032 GCTAGGGTTAGGGTTGTGCAG 60.679 57.143 0.00 0.00 0.00 4.41
176 177 1.906574 CTAGGGTTAGGGTTGTGCAGA 59.093 52.381 0.00 0.00 0.00 4.26
177 178 0.693049 AGGGTTAGGGTTGTGCAGAG 59.307 55.000 0.00 0.00 0.00 3.35
178 179 0.322546 GGGTTAGGGTTGTGCAGAGG 60.323 60.000 0.00 0.00 0.00 3.69
179 180 0.322546 GGTTAGGGTTGTGCAGAGGG 60.323 60.000 0.00 0.00 0.00 4.30
180 181 0.690762 GTTAGGGTTGTGCAGAGGGA 59.309 55.000 0.00 0.00 0.00 4.20
181 182 0.984230 TTAGGGTTGTGCAGAGGGAG 59.016 55.000 0.00 0.00 0.00 4.30
182 183 0.178903 TAGGGTTGTGCAGAGGGAGT 60.179 55.000 0.00 0.00 0.00 3.85
183 184 1.302832 GGGTTGTGCAGAGGGAGTG 60.303 63.158 0.00 0.00 0.00 3.51
184 185 1.754745 GGTTGTGCAGAGGGAGTGA 59.245 57.895 0.00 0.00 0.00 3.41
185 186 0.321122 GGTTGTGCAGAGGGAGTGAG 60.321 60.000 0.00 0.00 0.00 3.51
186 187 0.394565 GTTGTGCAGAGGGAGTGAGT 59.605 55.000 0.00 0.00 0.00 3.41
187 188 0.394192 TTGTGCAGAGGGAGTGAGTG 59.606 55.000 0.00 0.00 0.00 3.51
188 189 0.469892 TGTGCAGAGGGAGTGAGTGA 60.470 55.000 0.00 0.00 0.00 3.41
189 190 0.681733 GTGCAGAGGGAGTGAGTGAA 59.318 55.000 0.00 0.00 0.00 3.18
190 191 0.681733 TGCAGAGGGAGTGAGTGAAC 59.318 55.000 0.00 0.00 0.00 3.18
191 192 0.972883 GCAGAGGGAGTGAGTGAACT 59.027 55.000 0.00 0.00 0.00 3.01
192 193 1.337635 GCAGAGGGAGTGAGTGAACTG 60.338 57.143 0.00 0.00 0.00 3.16
193 194 2.242926 CAGAGGGAGTGAGTGAACTGA 58.757 52.381 0.00 0.00 0.00 3.41
194 195 2.230992 CAGAGGGAGTGAGTGAACTGAG 59.769 54.545 0.00 0.00 0.00 3.35
195 196 2.158385 AGAGGGAGTGAGTGAACTGAGT 60.158 50.000 0.00 0.00 0.00 3.41
196 197 2.630580 GAGGGAGTGAGTGAACTGAGTT 59.369 50.000 0.00 0.00 0.00 3.01
197 198 3.827302 GAGGGAGTGAGTGAACTGAGTTA 59.173 47.826 0.00 0.00 0.00 2.24
198 199 3.829601 AGGGAGTGAGTGAACTGAGTTAG 59.170 47.826 0.00 0.00 0.00 2.34
199 200 3.056465 GGGAGTGAGTGAACTGAGTTAGG 60.056 52.174 0.00 0.00 0.00 2.69
200 201 3.574826 GGAGTGAGTGAACTGAGTTAGGT 59.425 47.826 0.00 0.00 0.00 3.08
201 202 4.321378 GGAGTGAGTGAACTGAGTTAGGTC 60.321 50.000 0.00 0.00 43.76 3.85
207 208 3.572642 TGAACTGAGTTAGGTCACTCCA 58.427 45.455 0.00 0.00 45.89 3.86
208 209 3.321111 TGAACTGAGTTAGGTCACTCCAC 59.679 47.826 0.00 0.00 45.89 4.02
209 210 3.246416 ACTGAGTTAGGTCACTCCACT 57.754 47.619 0.00 0.00 42.39 4.00
210 211 3.158676 ACTGAGTTAGGTCACTCCACTC 58.841 50.000 0.00 0.00 42.39 3.51
211 212 2.160205 TGAGTTAGGTCACTCCACTCG 58.840 52.381 0.00 0.00 42.39 4.18
212 213 0.889306 AGTTAGGTCACTCCACTCGC 59.111 55.000 0.00 0.00 39.02 5.03
213 214 0.108756 GTTAGGTCACTCCACTCGCC 60.109 60.000 0.00 0.00 39.02 5.54
214 215 0.541063 TTAGGTCACTCCACTCGCCA 60.541 55.000 0.00 0.00 39.02 5.69
215 216 0.965866 TAGGTCACTCCACTCGCCAG 60.966 60.000 0.00 0.00 39.02 4.85
216 217 2.276116 GGTCACTCCACTCGCCAGA 61.276 63.158 0.00 0.00 35.97 3.86
233 234 5.079689 GCCAGAGGCTTCTTATATAGGTC 57.920 47.826 0.00 0.00 46.69 3.85
234 235 4.381079 GCCAGAGGCTTCTTATATAGGTCG 60.381 50.000 0.00 0.00 46.69 4.79
235 236 4.767928 CCAGAGGCTTCTTATATAGGTCGT 59.232 45.833 0.00 0.00 0.00 4.34
236 237 5.106078 CCAGAGGCTTCTTATATAGGTCGTC 60.106 48.000 0.00 0.00 0.00 4.20
237 238 4.696402 AGAGGCTTCTTATATAGGTCGTCG 59.304 45.833 0.00 0.00 0.00 5.12
238 239 3.757493 AGGCTTCTTATATAGGTCGTCGG 59.243 47.826 0.00 0.00 0.00 4.79
239 240 3.119566 GGCTTCTTATATAGGTCGTCGGG 60.120 52.174 0.00 0.00 0.00 5.14
240 241 3.505293 GCTTCTTATATAGGTCGTCGGGT 59.495 47.826 0.00 0.00 0.00 5.28
241 242 4.697352 GCTTCTTATATAGGTCGTCGGGTA 59.303 45.833 0.00 0.00 0.00 3.69
242 243 5.182001 GCTTCTTATATAGGTCGTCGGGTAA 59.818 44.000 0.00 0.00 0.00 2.85
243 244 6.622462 GCTTCTTATATAGGTCGTCGGGTAAG 60.622 46.154 0.00 0.00 0.00 2.34
244 245 5.248640 TCTTATATAGGTCGTCGGGTAAGG 58.751 45.833 0.00 0.00 0.00 2.69
245 246 3.795688 ATATAGGTCGTCGGGTAAGGA 57.204 47.619 0.00 0.00 0.00 3.36
246 247 1.978454 ATAGGTCGTCGGGTAAGGAG 58.022 55.000 0.00 0.00 0.00 3.69
247 248 0.620556 TAGGTCGTCGGGTAAGGAGT 59.379 55.000 0.00 0.00 0.00 3.85
248 249 0.679321 AGGTCGTCGGGTAAGGAGTC 60.679 60.000 0.00 0.00 0.00 3.36
249 250 1.427020 GTCGTCGGGTAAGGAGTCG 59.573 63.158 0.00 0.00 0.00 4.18
250 251 1.003355 TCGTCGGGTAAGGAGTCGT 60.003 57.895 0.00 0.00 0.00 4.34
251 252 1.136147 CGTCGGGTAAGGAGTCGTG 59.864 63.158 0.00 0.00 0.00 4.35
252 253 1.509923 GTCGGGTAAGGAGTCGTGG 59.490 63.158 0.00 0.00 0.00 4.94
253 254 1.679977 TCGGGTAAGGAGTCGTGGG 60.680 63.158 0.00 0.00 0.00 4.61
254 255 2.582978 GGGTAAGGAGTCGTGGGC 59.417 66.667 0.00 0.00 0.00 5.36
255 256 2.582978 GGTAAGGAGTCGTGGGCC 59.417 66.667 0.00 0.00 0.00 5.80
256 257 1.988406 GGTAAGGAGTCGTGGGCCT 60.988 63.158 4.53 0.00 0.00 5.19
257 258 1.218316 GTAAGGAGTCGTGGGCCTG 59.782 63.158 4.53 0.00 31.06 4.85
258 259 1.987855 TAAGGAGTCGTGGGCCTGG 60.988 63.158 4.53 0.00 31.06 4.45
263 264 3.712907 GTCGTGGGCCTGGGCTTA 61.713 66.667 20.47 6.93 41.60 3.09
264 265 3.399181 TCGTGGGCCTGGGCTTAG 61.399 66.667 20.47 11.07 41.60 2.18
265 266 4.489771 CGTGGGCCTGGGCTTAGG 62.490 72.222 20.47 11.10 41.60 2.69
276 277 3.727387 GCTTAGGCCCAGGTCTGA 58.273 61.111 0.00 0.00 0.00 3.27
277 278 1.524482 GCTTAGGCCCAGGTCTGAG 59.476 63.158 5.75 5.75 36.67 3.35
278 279 1.268283 GCTTAGGCCCAGGTCTGAGT 61.268 60.000 11.30 0.00 36.10 3.41
279 280 0.827368 CTTAGGCCCAGGTCTGAGTC 59.173 60.000 0.00 0.00 30.21 3.36
280 281 0.970937 TTAGGCCCAGGTCTGAGTCG 60.971 60.000 0.00 0.00 0.00 4.18
281 282 1.859841 TAGGCCCAGGTCTGAGTCGA 61.860 60.000 0.00 0.00 0.00 4.20
282 283 2.574399 GCCCAGGTCTGAGTCGAC 59.426 66.667 7.70 7.70 0.00 4.20
283 284 2.878429 CCCAGGTCTGAGTCGACG 59.122 66.667 10.46 0.00 34.75 5.12
284 285 2.179517 CCAGGTCTGAGTCGACGC 59.820 66.667 12.80 12.80 34.75 5.19
285 286 2.626780 CCAGGTCTGAGTCGACGCA 61.627 63.158 20.95 20.95 34.75 5.24
286 287 1.442857 CAGGTCTGAGTCGACGCAC 60.443 63.158 18.48 9.51 34.75 5.34
287 288 1.601197 AGGTCTGAGTCGACGCACT 60.601 57.895 18.48 11.22 34.75 4.40
288 289 1.154188 GGTCTGAGTCGACGCACTC 60.154 63.158 18.48 13.06 42.90 3.51
289 290 1.154188 GTCTGAGTCGACGCACTCC 60.154 63.158 18.48 5.22 42.04 3.85
290 291 2.179517 CTGAGTCGACGCACTCCC 59.820 66.667 18.48 0.00 42.04 4.30
291 292 3.669036 CTGAGTCGACGCACTCCCG 62.669 68.421 18.48 4.49 42.04 5.14
317 318 4.014065 GTTATGACGAGGCGAGGC 57.986 61.111 0.00 0.00 0.00 4.70
318 319 1.141019 GTTATGACGAGGCGAGGCA 59.859 57.895 0.00 0.00 0.00 4.75
319 320 0.459585 GTTATGACGAGGCGAGGCAA 60.460 55.000 0.00 0.00 0.00 4.52
320 321 0.179111 TTATGACGAGGCGAGGCAAG 60.179 55.000 0.00 0.00 0.00 4.01
321 322 2.629050 TATGACGAGGCGAGGCAAGC 62.629 60.000 0.00 0.00 0.00 4.01
330 331 4.760047 GAGGCAAGCGGCGAAGGA 62.760 66.667 12.98 0.00 46.16 3.36
331 332 4.767255 AGGCAAGCGGCGAAGGAG 62.767 66.667 12.98 0.00 46.16 3.69
332 333 4.760047 GGCAAGCGGCGAAGGAGA 62.760 66.667 12.98 0.00 46.16 3.71
333 334 2.742372 GCAAGCGGCGAAGGAGAA 60.742 61.111 12.98 0.00 0.00 2.87
334 335 2.744768 GCAAGCGGCGAAGGAGAAG 61.745 63.158 12.98 0.00 0.00 2.85
335 336 2.103042 CAAGCGGCGAAGGAGAAGG 61.103 63.158 12.98 0.00 0.00 3.46
336 337 2.283529 AAGCGGCGAAGGAGAAGGA 61.284 57.895 12.98 0.00 0.00 3.36
337 338 2.202810 GCGGCGAAGGAGAAGGAG 60.203 66.667 12.98 0.00 0.00 3.69
338 339 2.202810 CGGCGAAGGAGAAGGAGC 60.203 66.667 0.00 0.00 0.00 4.70
339 340 2.202810 GGCGAAGGAGAAGGAGCG 60.203 66.667 0.00 0.00 0.00 5.03
340 341 2.888051 GCGAAGGAGAAGGAGCGC 60.888 66.667 0.00 0.00 37.60 5.92
341 342 2.580867 CGAAGGAGAAGGAGCGCG 60.581 66.667 0.00 0.00 0.00 6.86
342 343 2.888051 GAAGGAGAAGGAGCGCGC 60.888 66.667 26.66 26.66 0.00 6.86
343 344 4.803426 AAGGAGAAGGAGCGCGCG 62.803 66.667 28.44 28.44 0.00 6.86
345 346 4.189188 GGAGAAGGAGCGCGCGTA 62.189 66.667 32.35 0.00 0.00 4.42
346 347 2.026301 GAGAAGGAGCGCGCGTAT 59.974 61.111 32.35 20.80 0.00 3.06
347 348 1.281960 GAGAAGGAGCGCGCGTATA 59.718 57.895 32.35 0.00 0.00 1.47
348 349 0.997726 GAGAAGGAGCGCGCGTATAC 60.998 60.000 32.35 21.02 0.00 1.47
349 350 1.298863 GAAGGAGCGCGCGTATACA 60.299 57.895 32.35 0.00 0.00 2.29
350 351 0.868602 GAAGGAGCGCGCGTATACAA 60.869 55.000 32.35 0.00 0.00 2.41
351 352 1.143969 AAGGAGCGCGCGTATACAAC 61.144 55.000 32.35 12.72 0.00 3.32
352 353 1.588139 GGAGCGCGCGTATACAACT 60.588 57.895 32.35 17.82 0.00 3.16
353 354 1.538117 GGAGCGCGCGTATACAACTC 61.538 60.000 32.35 24.59 0.00 3.01
354 355 1.538117 GAGCGCGCGTATACAACTCC 61.538 60.000 32.35 10.28 0.00 3.85
355 356 1.588139 GCGCGCGTATACAACTCCT 60.588 57.895 32.35 0.00 0.00 3.69
356 357 1.538117 GCGCGCGTATACAACTCCTC 61.538 60.000 32.35 5.47 0.00 3.71
357 358 0.029035 CGCGCGTATACAACTCCTCT 59.971 55.000 24.19 0.00 0.00 3.69
358 359 1.756367 GCGCGTATACAACTCCTCTC 58.244 55.000 8.43 0.00 0.00 3.20
359 360 1.334243 GCGCGTATACAACTCCTCTCT 59.666 52.381 8.43 0.00 0.00 3.10
360 361 2.602694 GCGCGTATACAACTCCTCTCTC 60.603 54.545 8.43 0.00 0.00 3.20
361 362 2.612672 CGCGTATACAACTCCTCTCTCA 59.387 50.000 0.00 0.00 0.00 3.27
362 363 3.064958 CGCGTATACAACTCCTCTCTCAA 59.935 47.826 0.00 0.00 0.00 3.02
363 364 4.602995 GCGTATACAACTCCTCTCTCAAG 58.397 47.826 3.32 0.00 0.00 3.02
364 365 4.498345 GCGTATACAACTCCTCTCTCAAGG 60.498 50.000 3.32 0.00 37.81 3.61
365 366 4.641094 CGTATACAACTCCTCTCTCAAGGT 59.359 45.833 3.32 0.00 37.69 3.50
366 367 5.220892 CGTATACAACTCCTCTCTCAAGGTC 60.221 48.000 3.32 0.00 37.69 3.85
367 368 2.252714 ACAACTCCTCTCTCAAGGTCC 58.747 52.381 0.00 0.00 37.69 4.46
368 369 1.552792 CAACTCCTCTCTCAAGGTCCC 59.447 57.143 0.00 0.00 37.69 4.46
369 370 0.787084 ACTCCTCTCTCAAGGTCCCA 59.213 55.000 0.00 0.00 37.69 4.37
370 371 1.150135 ACTCCTCTCTCAAGGTCCCAA 59.850 52.381 0.00 0.00 37.69 4.12
371 372 2.225753 ACTCCTCTCTCAAGGTCCCAAT 60.226 50.000 0.00 0.00 37.69 3.16
372 373 2.170187 CTCCTCTCTCAAGGTCCCAATG 59.830 54.545 0.00 0.00 37.69 2.82
373 374 1.211457 CCTCTCTCAAGGTCCCAATGG 59.789 57.143 0.00 0.00 0.00 3.16
374 375 0.620556 TCTCTCAAGGTCCCAATGGC 59.379 55.000 0.00 0.00 0.00 4.40
375 376 0.329261 CTCTCAAGGTCCCAATGGCA 59.671 55.000 0.00 0.00 0.00 4.92
376 377 0.776810 TCTCAAGGTCCCAATGGCAA 59.223 50.000 0.00 0.00 0.00 4.52
377 378 1.358787 TCTCAAGGTCCCAATGGCAAT 59.641 47.619 0.00 0.00 0.00 3.56
378 379 1.479323 CTCAAGGTCCCAATGGCAATG 59.521 52.381 0.00 0.00 0.00 2.82
379 380 1.203162 TCAAGGTCCCAATGGCAATGT 60.203 47.619 1.30 0.00 0.00 2.71
380 381 1.066716 CAAGGTCCCAATGGCAATGTG 60.067 52.381 1.30 0.00 0.00 3.21
381 382 0.615544 AGGTCCCAATGGCAATGTGG 60.616 55.000 1.30 5.11 0.00 4.17
382 383 0.904394 GGTCCCAATGGCAATGTGGT 60.904 55.000 12.54 0.00 0.00 4.16
383 384 1.618345 GGTCCCAATGGCAATGTGGTA 60.618 52.381 12.54 0.00 0.00 3.25
384 385 1.750778 GTCCCAATGGCAATGTGGTAG 59.249 52.381 12.54 1.40 0.00 3.18
385 386 1.638070 TCCCAATGGCAATGTGGTAGA 59.362 47.619 12.54 3.35 0.00 2.59
386 387 2.026641 CCCAATGGCAATGTGGTAGAG 58.973 52.381 12.54 0.00 0.00 2.43
387 388 1.406539 CCAATGGCAATGTGGTAGAGC 59.593 52.381 1.30 0.00 0.00 4.09
388 389 2.093890 CAATGGCAATGTGGTAGAGCA 58.906 47.619 0.00 0.00 0.00 4.26
389 390 2.048444 ATGGCAATGTGGTAGAGCAG 57.952 50.000 0.00 0.00 0.00 4.24
390 391 0.677731 TGGCAATGTGGTAGAGCAGC 60.678 55.000 0.00 0.00 0.00 5.25
391 392 1.379642 GGCAATGTGGTAGAGCAGCC 61.380 60.000 0.00 0.00 0.00 4.85
392 393 1.379642 GCAATGTGGTAGAGCAGCCC 61.380 60.000 0.00 0.00 0.00 5.19
393 394 0.254178 CAATGTGGTAGAGCAGCCCT 59.746 55.000 0.00 0.00 0.00 5.19
394 395 0.995024 AATGTGGTAGAGCAGCCCTT 59.005 50.000 0.00 0.00 0.00 3.95
395 396 1.879575 ATGTGGTAGAGCAGCCCTTA 58.120 50.000 0.00 0.00 0.00 2.69
396 397 1.879575 TGTGGTAGAGCAGCCCTTAT 58.120 50.000 0.00 0.00 0.00 1.73
397 398 3.040655 TGTGGTAGAGCAGCCCTTATA 57.959 47.619 0.00 0.00 0.00 0.98
398 399 3.380393 TGTGGTAGAGCAGCCCTTATAA 58.620 45.455 0.00 0.00 0.00 0.98
399 400 3.778075 TGTGGTAGAGCAGCCCTTATAAA 59.222 43.478 0.00 0.00 0.00 1.40
400 401 4.226394 TGTGGTAGAGCAGCCCTTATAAAA 59.774 41.667 0.00 0.00 0.00 1.52
401 402 4.816925 GTGGTAGAGCAGCCCTTATAAAAG 59.183 45.833 0.00 0.00 0.00 2.27
415 416 7.489574 CCTTATAAAAGGCTCTCATTCTCAC 57.510 40.000 0.00 0.00 45.78 3.51
416 417 7.278875 CCTTATAAAAGGCTCTCATTCTCACT 58.721 38.462 0.00 0.00 45.78 3.41
417 418 7.440856 CCTTATAAAAGGCTCTCATTCTCACTC 59.559 40.741 0.00 0.00 45.78 3.51
418 419 3.625649 AAAGGCTCTCATTCTCACTCC 57.374 47.619 0.00 0.00 0.00 3.85
419 420 2.244486 AGGCTCTCATTCTCACTCCA 57.756 50.000 0.00 0.00 0.00 3.86
420 421 1.830477 AGGCTCTCATTCTCACTCCAC 59.170 52.381 0.00 0.00 0.00 4.02
421 422 1.830477 GGCTCTCATTCTCACTCCACT 59.170 52.381 0.00 0.00 0.00 4.00
422 423 3.027412 GGCTCTCATTCTCACTCCACTA 58.973 50.000 0.00 0.00 0.00 2.74
423 424 3.068024 GGCTCTCATTCTCACTCCACTAG 59.932 52.174 0.00 0.00 0.00 2.57
424 425 3.490761 GCTCTCATTCTCACTCCACTAGC 60.491 52.174 0.00 0.00 0.00 3.42
425 426 3.698539 CTCTCATTCTCACTCCACTAGCA 59.301 47.826 0.00 0.00 0.00 3.49
426 427 3.698539 TCTCATTCTCACTCCACTAGCAG 59.301 47.826 0.00 0.00 0.00 4.24
427 428 3.435275 TCATTCTCACTCCACTAGCAGT 58.565 45.455 0.00 0.00 0.00 4.40
428 429 4.600062 TCATTCTCACTCCACTAGCAGTA 58.400 43.478 0.00 0.00 0.00 2.74
429 430 5.204292 TCATTCTCACTCCACTAGCAGTAT 58.796 41.667 0.00 0.00 0.00 2.12
430 431 4.991153 TTCTCACTCCACTAGCAGTATG 57.009 45.455 0.00 0.00 40.87 2.39
431 432 3.291584 TCTCACTCCACTAGCAGTATGG 58.708 50.000 0.00 0.00 35.86 2.74
467 468 0.040942 TGCCATGCACCTAAATGGGT 59.959 50.000 4.03 0.00 43.10 4.51
535 536 8.042515 GCCCATTTATAATCCAACAATATGCAT 58.957 33.333 3.79 3.79 0.00 3.96
620 621 2.862536 GTCGATGATCACACACATGAGG 59.137 50.000 0.00 0.00 30.46 3.86
626 627 0.953727 TCACACACATGAGGCAAAGC 59.046 50.000 0.00 0.00 0.00 3.51
632 633 1.133253 CATGAGGCAAAGCGTGTCG 59.867 57.895 0.00 0.00 36.74 4.35
677 678 2.498726 TGCTCACACACGCACTCA 59.501 55.556 0.00 0.00 0.00 3.41
678 679 1.882625 TGCTCACACACGCACTCAC 60.883 57.895 0.00 0.00 0.00 3.51
679 680 1.592669 GCTCACACACGCACTCACT 60.593 57.895 0.00 0.00 0.00 3.41
680 681 1.552348 GCTCACACACGCACTCACTC 61.552 60.000 0.00 0.00 0.00 3.51
681 682 0.249031 CTCACACACGCACTCACTCA 60.249 55.000 0.00 0.00 0.00 3.41
682 683 0.527600 TCACACACGCACTCACTCAC 60.528 55.000 0.00 0.00 0.00 3.51
683 684 0.528466 CACACACGCACTCACTCACT 60.528 55.000 0.00 0.00 0.00 3.41
684 685 0.249073 ACACACGCACTCACTCACTC 60.249 55.000 0.00 0.00 0.00 3.51
685 686 0.249031 CACACGCACTCACTCACTCA 60.249 55.000 0.00 0.00 0.00 3.41
686 687 0.249073 ACACGCACTCACTCACTCAC 60.249 55.000 0.00 0.00 0.00 3.51
687 688 0.031314 CACGCACTCACTCACTCACT 59.969 55.000 0.00 0.00 0.00 3.41
745 746 8.158169 TGGTGAGATGCATCAAATTAATAGTC 57.842 34.615 27.81 12.92 33.85 2.59
938 946 4.204012 TGTCCATTTCGTTTGTTCTCCTT 58.796 39.130 0.00 0.00 0.00 3.36
1013 1024 5.131784 ACTAGTTAAGATGAGGACTACCCG 58.868 45.833 0.00 0.00 40.87 5.28
1020 1031 0.472352 TGAGGACTACCCGGGTGTTT 60.472 55.000 36.97 19.77 40.87 2.83
1028 1039 2.526046 CCCGGGTGTTTCTCCTGGT 61.526 63.158 14.18 0.00 46.93 4.00
1074 1085 4.219944 TCAGGTACTCGCTTGTTCTTGTAT 59.780 41.667 0.00 0.00 34.60 2.29
1090 1109 6.441093 TCTTGTATTTCACAATCTCATGCC 57.559 37.500 0.00 0.00 45.96 4.40
1097 1122 6.587206 TTTCACAATCTCATGCCACAAATA 57.413 33.333 0.00 0.00 0.00 1.40
1101 1126 5.751509 CACAATCTCATGCCACAAATAATGG 59.248 40.000 0.00 0.00 40.50 3.16
1110 1135 4.205065 CCACAAATAATGGCCATGTTGT 57.795 40.909 25.89 25.89 0.00 3.32
1111 1136 3.933955 CCACAAATAATGGCCATGTTGTG 59.066 43.478 35.89 35.89 0.00 3.33
1112 1137 4.322574 CCACAAATAATGGCCATGTTGTGA 60.323 41.667 39.75 20.21 0.00 3.58
1113 1138 5.421277 CACAAATAATGGCCATGTTGTGAT 58.579 37.500 37.66 20.99 0.00 3.06
1114 1139 5.521010 CACAAATAATGGCCATGTTGTGATC 59.479 40.000 37.66 3.41 0.00 2.92
1238 1263 1.167851 CACCAAAGCCATGTGACGAT 58.832 50.000 0.00 0.00 31.66 3.73
1240 1265 0.179156 CCAAAGCCATGTGACGATGC 60.179 55.000 0.00 0.00 0.00 3.91
1242 1267 1.647545 AAAGCCATGTGACGATGCCG 61.648 55.000 0.00 0.00 42.50 5.69
1271 1296 2.081462 GTGGCGTGCTACAACCTTATT 58.919 47.619 3.27 0.00 0.00 1.40
1272 1297 2.095372 GTGGCGTGCTACAACCTTATTC 59.905 50.000 3.27 0.00 0.00 1.75
1355 1380 5.221342 CCAGCCTCCAATGAGTAGTAACTAG 60.221 48.000 0.00 0.00 35.56 2.57
1356 1381 4.342665 AGCCTCCAATGAGTAGTAACTAGC 59.657 45.833 0.00 0.00 35.56 3.42
1357 1382 4.342665 GCCTCCAATGAGTAGTAACTAGCT 59.657 45.833 0.00 0.00 35.56 3.32
1358 1383 5.535406 GCCTCCAATGAGTAGTAACTAGCTA 59.465 44.000 0.00 0.00 35.56 3.32
1359 1384 6.040616 GCCTCCAATGAGTAGTAACTAGCTAA 59.959 42.308 0.00 0.00 35.56 3.09
1361 1386 8.085296 CCTCCAATGAGTAGTAACTAGCTAATG 58.915 40.741 0.00 0.00 35.56 1.90
1363 1388 9.368416 TCCAATGAGTAGTAACTAGCTAATGAT 57.632 33.333 0.00 0.00 35.56 2.45
1368 1393 9.297037 TGAGTAGTAACTAGCTAATGATATGCA 57.703 33.333 0.00 0.00 35.56 3.96
1407 1568 1.066002 CAGCAAGGTTGTTCACTGGTG 59.934 52.381 0.00 0.00 0.00 4.17
1417 1578 0.324614 TTCACTGGTGATCGGCATGT 59.675 50.000 4.19 0.00 39.64 3.21
1418 1579 0.324614 TCACTGGTGATCGGCATGTT 59.675 50.000 0.00 0.00 34.14 2.71
1419 1580 1.552792 TCACTGGTGATCGGCATGTTA 59.447 47.619 0.00 0.00 34.14 2.41
1442 1603 9.869844 GTTAATTATGAAGAGTGATGAATTCGG 57.130 33.333 0.04 0.00 0.00 4.30
1464 1625 5.122396 CGGCCTGGCTTCTTGAATTATATAC 59.878 44.000 19.68 0.00 0.00 1.47
1465 1626 6.241645 GGCCTGGCTTCTTGAATTATATACT 58.758 40.000 19.68 0.00 0.00 2.12
1466 1627 7.394816 GGCCTGGCTTCTTGAATTATATACTA 58.605 38.462 19.68 0.00 0.00 1.82
1467 1628 7.334671 GGCCTGGCTTCTTGAATTATATACTAC 59.665 40.741 19.68 0.00 0.00 2.73
1468 1629 7.334671 GCCTGGCTTCTTGAATTATATACTACC 59.665 40.741 12.43 0.00 0.00 3.18
1469 1630 7.545965 CCTGGCTTCTTGAATTATATACTACCG 59.454 40.741 0.00 0.00 0.00 4.02
1470 1631 7.959175 TGGCTTCTTGAATTATATACTACCGT 58.041 34.615 0.00 0.00 0.00 4.83
1471 1632 8.426489 TGGCTTCTTGAATTATATACTACCGTT 58.574 33.333 0.00 0.00 0.00 4.44
1472 1633 9.269453 GGCTTCTTGAATTATATACTACCGTTT 57.731 33.333 0.00 0.00 0.00 3.60
1475 1636 9.768662 TTCTTGAATTATATACTACCGTTTCCC 57.231 33.333 0.00 0.00 0.00 3.97
1476 1637 8.084073 TCTTGAATTATATACTACCGTTTCCCG 58.916 37.037 0.00 0.00 0.00 5.14
1477 1638 6.158598 TGAATTATATACTACCGTTTCCCGC 58.841 40.000 0.00 0.00 34.38 6.13
1478 1639 5.726980 ATTATATACTACCGTTTCCCGCA 57.273 39.130 0.00 0.00 34.38 5.69
1479 1640 5.528043 TTATATACTACCGTTTCCCGCAA 57.472 39.130 0.00 0.00 34.38 4.85
1480 1641 2.766345 ATACTACCGTTTCCCGCAAA 57.234 45.000 0.00 0.00 34.38 3.68
1481 1642 2.540265 TACTACCGTTTCCCGCAAAA 57.460 45.000 0.00 0.00 34.38 2.44
1482 1643 1.677942 ACTACCGTTTCCCGCAAAAA 58.322 45.000 0.00 0.00 34.38 1.94
1563 1730 6.258727 GTGTACTTTATGTCATGATCCCAGTG 59.741 42.308 0.00 0.00 0.00 3.66
1583 1752 3.769844 GTGGTTAGAGATCAAGAGGGACA 59.230 47.826 0.00 0.00 0.00 4.02
1591 1760 3.960102 AGATCAAGAGGGACATCTCTCAC 59.040 47.826 11.34 0.00 42.75 3.51
1599 1768 2.303022 GGGACATCTCTCACAAGTTCCA 59.697 50.000 0.00 0.00 0.00 3.53
1613 1782 3.818295 AGTTCCAGTACAGAGAGAGGT 57.182 47.619 0.00 0.00 0.00 3.85
1616 1785 0.820871 CCAGTACAGAGAGAGGTGGC 59.179 60.000 0.00 0.00 0.00 5.01
1618 1787 2.106566 CAGTACAGAGAGAGGTGGCAT 58.893 52.381 0.00 0.00 0.00 4.40
1619 1788 2.499289 CAGTACAGAGAGAGGTGGCATT 59.501 50.000 0.00 0.00 0.00 3.56
1620 1789 2.763448 AGTACAGAGAGAGGTGGCATTC 59.237 50.000 0.00 0.00 0.00 2.67
1646 1815 1.888512 GAAGGCATCTTTTCTGGTGCA 59.111 47.619 2.19 0.00 39.27 4.57
1647 1816 2.226962 AGGCATCTTTTCTGGTGCAT 57.773 45.000 2.19 0.00 39.27 3.96
1648 1817 1.822990 AGGCATCTTTTCTGGTGCATG 59.177 47.619 2.19 0.00 39.27 4.06
1649 1818 1.636988 GCATCTTTTCTGGTGCATGC 58.363 50.000 11.82 11.82 37.52 4.06
1664 1833 1.469251 GCATGCTGTTGATCTGGCTTG 60.469 52.381 11.37 3.38 34.45 4.01
1665 1834 2.089201 CATGCTGTTGATCTGGCTTGA 58.911 47.619 0.00 0.00 33.58 3.02
1678 1847 4.401022 TCTGGCTTGATCTGAAACAACAT 58.599 39.130 0.00 0.00 0.00 2.71
1679 1848 4.828939 TCTGGCTTGATCTGAAACAACATT 59.171 37.500 0.00 0.00 0.00 2.71
1685 1854 6.072838 GCTTGATCTGAAACAACATTCTCTCA 60.073 38.462 0.00 0.00 0.00 3.27
1747 1921 4.796231 CTGGACGACCGCCGGAAG 62.796 72.222 11.71 5.48 43.93 3.46
1753 1927 3.431725 GACCGCCGGAAGCCTTTG 61.432 66.667 11.71 0.00 38.78 2.77
1754 1928 3.894547 GACCGCCGGAAGCCTTTGA 62.895 63.158 11.71 0.00 38.78 2.69
1755 1929 2.671619 CCGCCGGAAGCCTTTGAA 60.672 61.111 5.05 0.00 38.78 2.69
1756 1930 2.561373 CGCCGGAAGCCTTTGAAC 59.439 61.111 5.05 0.00 38.78 3.18
1757 1931 2.561373 GCCGGAAGCCTTTGAACG 59.439 61.111 5.05 0.00 34.35 3.95
1758 1932 2.978018 GCCGGAAGCCTTTGAACGG 61.978 63.158 5.05 0.00 43.81 4.44
1775 1949 4.681978 GCGACCGAAGTGGCAGGT 62.682 66.667 0.00 0.00 46.12 4.00
1776 1950 2.030562 CGACCGAAGTGGCAGGTT 59.969 61.111 0.00 0.00 43.94 3.50
1777 1951 2.317609 CGACCGAAGTGGCAGGTTG 61.318 63.158 0.00 0.00 43.94 3.77
1778 1952 1.227853 GACCGAAGTGGCAGGTTGT 60.228 57.895 0.00 0.00 43.94 3.32
1779 1953 1.227853 ACCGAAGTGGCAGGTTGTC 60.228 57.895 0.00 0.00 43.94 3.18
1780 1954 1.966451 CCGAAGTGGCAGGTTGTCC 60.966 63.158 0.00 0.00 0.00 4.02
1781 1955 1.227823 CGAAGTGGCAGGTTGTCCA 60.228 57.895 0.00 0.00 35.89 4.02
1782 1956 0.817634 CGAAGTGGCAGGTTGTCCAA 60.818 55.000 0.00 0.00 33.57 3.53
1783 1957 0.954452 GAAGTGGCAGGTTGTCCAAG 59.046 55.000 0.00 0.00 33.57 3.61
1784 1958 0.550914 AAGTGGCAGGTTGTCCAAGA 59.449 50.000 0.00 0.00 33.57 3.02
1785 1959 0.550914 AGTGGCAGGTTGTCCAAGAA 59.449 50.000 0.00 0.00 33.57 2.52
1786 1960 0.954452 GTGGCAGGTTGTCCAAGAAG 59.046 55.000 0.00 0.00 33.57 2.85
1787 1961 0.843309 TGGCAGGTTGTCCAAGAAGA 59.157 50.000 0.00 0.00 35.89 2.87
1788 1962 1.202806 TGGCAGGTTGTCCAAGAAGAG 60.203 52.381 0.00 0.00 35.89 2.85
1789 1963 1.072331 GGCAGGTTGTCCAAGAAGAGA 59.928 52.381 0.00 0.00 35.89 3.10
1790 1964 2.147150 GCAGGTTGTCCAAGAAGAGAC 58.853 52.381 0.00 0.00 35.89 3.36
1791 1965 2.224402 GCAGGTTGTCCAAGAAGAGACT 60.224 50.000 0.00 0.00 35.89 3.24
1792 1966 3.658709 CAGGTTGTCCAAGAAGAGACTC 58.341 50.000 0.00 0.00 35.89 3.36
1793 1967 2.635427 AGGTTGTCCAAGAAGAGACTCC 59.365 50.000 0.00 0.00 35.89 3.85
1794 1968 2.368875 GGTTGTCCAAGAAGAGACTCCA 59.631 50.000 0.00 0.00 34.02 3.86
1795 1969 3.181454 GGTTGTCCAAGAAGAGACTCCAA 60.181 47.826 0.00 0.00 34.02 3.53
1796 1970 4.061596 GTTGTCCAAGAAGAGACTCCAAG 58.938 47.826 0.00 0.00 34.02 3.61
1797 1971 3.309296 TGTCCAAGAAGAGACTCCAAGT 58.691 45.455 0.00 0.00 34.02 3.16
1798 1972 4.480115 TGTCCAAGAAGAGACTCCAAGTA 58.520 43.478 0.00 0.00 34.02 2.24
1799 1973 4.524714 TGTCCAAGAAGAGACTCCAAGTAG 59.475 45.833 0.00 0.00 34.02 2.57
1800 1974 4.525100 GTCCAAGAAGAGACTCCAAGTAGT 59.475 45.833 0.00 0.00 0.00 2.73
1804 1978 6.885376 CCAAGAAGAGACTCCAAGTAGTACTA 59.115 42.308 2.50 0.00 0.00 1.82
1915 2089 7.056006 AGATGATTATGGCATGTGTTACTTCA 58.944 34.615 10.98 2.16 0.00 3.02
1941 2115 8.576442 AGTTAATTACAGGATTTGGTTCAACTG 58.424 33.333 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.093159 TTTAGGGAGCGTCTCGACTC 58.907 55.000 6.16 0.00 32.46 3.36
1 2 1.542492 TTTTAGGGAGCGTCTCGACT 58.458 50.000 0.00 4.96 0.00 4.18
2 3 1.991264 GTTTTTAGGGAGCGTCTCGAC 59.009 52.381 0.00 0.00 0.00 4.20
3 4 1.067354 GGTTTTTAGGGAGCGTCTCGA 60.067 52.381 0.00 0.00 0.00 4.04
4 5 1.067071 AGGTTTTTAGGGAGCGTCTCG 60.067 52.381 1.64 0.00 0.00 4.04
5 6 2.764439 AGGTTTTTAGGGAGCGTCTC 57.236 50.000 0.00 0.00 0.00 3.36
6 7 4.838904 ATAAGGTTTTTAGGGAGCGTCT 57.161 40.909 0.00 0.00 0.00 4.18
7 8 4.698780 ACAATAAGGTTTTTAGGGAGCGTC 59.301 41.667 0.00 0.00 0.00 5.19
8 9 4.659115 ACAATAAGGTTTTTAGGGAGCGT 58.341 39.130 0.00 0.00 0.00 5.07
9 10 4.201783 CGACAATAAGGTTTTTAGGGAGCG 60.202 45.833 0.00 0.00 0.00 5.03
10 11 4.698780 ACGACAATAAGGTTTTTAGGGAGC 59.301 41.667 0.00 0.00 0.00 4.70
11 12 6.653740 AGAACGACAATAAGGTTTTTAGGGAG 59.346 38.462 0.00 0.00 0.00 4.30
12 13 6.536447 AGAACGACAATAAGGTTTTTAGGGA 58.464 36.000 0.00 0.00 0.00 4.20
13 14 6.128090 GGAGAACGACAATAAGGTTTTTAGGG 60.128 42.308 0.00 0.00 0.00 3.53
14 15 6.128090 GGGAGAACGACAATAAGGTTTTTAGG 60.128 42.308 0.00 0.00 0.00 2.69
15 16 6.401796 CGGGAGAACGACAATAAGGTTTTTAG 60.402 42.308 0.00 0.00 35.47 1.85
16 17 5.409214 CGGGAGAACGACAATAAGGTTTTTA 59.591 40.000 0.00 0.00 35.47 1.52
17 18 4.214758 CGGGAGAACGACAATAAGGTTTTT 59.785 41.667 0.00 0.00 35.47 1.94
18 19 3.749609 CGGGAGAACGACAATAAGGTTTT 59.250 43.478 0.00 0.00 35.47 2.43
19 20 3.332034 CGGGAGAACGACAATAAGGTTT 58.668 45.455 0.00 0.00 35.47 3.27
20 21 2.354403 CCGGGAGAACGACAATAAGGTT 60.354 50.000 0.00 0.00 35.47 3.50
21 22 1.206371 CCGGGAGAACGACAATAAGGT 59.794 52.381 0.00 0.00 35.47 3.50
22 23 1.472728 CCCGGGAGAACGACAATAAGG 60.473 57.143 18.48 0.00 35.47 2.69
23 24 1.935933 CCCGGGAGAACGACAATAAG 58.064 55.000 18.48 0.00 35.47 1.73
24 25 0.108041 GCCCGGGAGAACGACAATAA 60.108 55.000 29.31 0.00 35.47 1.40
25 26 1.259142 TGCCCGGGAGAACGACAATA 61.259 55.000 29.31 0.00 35.47 1.90
26 27 2.267961 GCCCGGGAGAACGACAAT 59.732 61.111 29.31 0.00 35.47 2.71
27 28 3.234630 CTGCCCGGGAGAACGACAA 62.235 63.158 29.31 0.00 35.47 3.18
28 29 3.691342 CTGCCCGGGAGAACGACA 61.691 66.667 29.31 9.95 35.47 4.35
29 30 4.452733 CCTGCCCGGGAGAACGAC 62.453 72.222 29.31 4.52 35.47 4.34
30 31 3.976490 ATCCTGCCCGGGAGAACGA 62.976 63.158 29.31 11.84 38.92 3.85
31 32 3.447025 GATCCTGCCCGGGAGAACG 62.447 68.421 29.31 5.84 38.92 3.95
32 33 2.034048 GAGATCCTGCCCGGGAGAAC 62.034 65.000 29.31 15.95 38.92 3.01
33 34 1.762460 GAGATCCTGCCCGGGAGAA 60.762 63.158 29.31 7.89 38.92 2.87
34 35 2.123251 GAGATCCTGCCCGGGAGA 60.123 66.667 29.31 18.28 38.92 3.71
35 36 3.610669 CGAGATCCTGCCCGGGAG 61.611 72.222 29.31 18.62 38.92 4.30
36 37 2.946988 ATTCGAGATCCTGCCCGGGA 62.947 60.000 29.31 8.79 39.95 5.14
37 38 2.511452 ATTCGAGATCCTGCCCGGG 61.511 63.158 19.09 19.09 0.00 5.73
38 39 1.301244 CATTCGAGATCCTGCCCGG 60.301 63.158 0.00 0.00 0.00 5.73
39 40 0.598680 GTCATTCGAGATCCTGCCCG 60.599 60.000 0.00 0.00 0.00 6.13
40 41 0.465705 TGTCATTCGAGATCCTGCCC 59.534 55.000 0.00 0.00 0.00 5.36
41 42 1.539929 CCTGTCATTCGAGATCCTGCC 60.540 57.143 0.00 0.00 0.00 4.85
42 43 1.539929 CCCTGTCATTCGAGATCCTGC 60.540 57.143 0.00 0.00 0.00 4.85
43 44 1.759445 ACCCTGTCATTCGAGATCCTG 59.241 52.381 0.00 0.00 0.00 3.86
44 45 2.166907 ACCCTGTCATTCGAGATCCT 57.833 50.000 0.00 0.00 0.00 3.24
45 46 2.483889 GGAACCCTGTCATTCGAGATCC 60.484 54.545 0.00 0.00 0.00 3.36
46 47 2.799917 CGGAACCCTGTCATTCGAGATC 60.800 54.545 0.00 0.00 0.00 2.75
47 48 1.137086 CGGAACCCTGTCATTCGAGAT 59.863 52.381 0.00 0.00 0.00 2.75
48 49 0.530744 CGGAACCCTGTCATTCGAGA 59.469 55.000 0.00 0.00 0.00 4.04
49 50 0.460284 CCGGAACCCTGTCATTCGAG 60.460 60.000 0.00 0.00 0.00 4.04
50 51 0.901114 TCCGGAACCCTGTCATTCGA 60.901 55.000 0.00 0.00 0.00 3.71
51 52 0.460284 CTCCGGAACCCTGTCATTCG 60.460 60.000 5.23 0.00 0.00 3.34
52 53 0.107654 CCTCCGGAACCCTGTCATTC 60.108 60.000 5.23 0.00 0.00 2.67
53 54 1.991230 CCTCCGGAACCCTGTCATT 59.009 57.895 5.23 0.00 0.00 2.57
54 55 2.670148 GCCTCCGGAACCCTGTCAT 61.670 63.158 5.23 0.00 0.00 3.06
55 56 3.319198 GCCTCCGGAACCCTGTCA 61.319 66.667 5.23 0.00 0.00 3.58
56 57 3.319198 TGCCTCCGGAACCCTGTC 61.319 66.667 5.23 0.00 0.00 3.51
57 58 3.637273 GTGCCTCCGGAACCCTGT 61.637 66.667 5.23 0.00 0.00 4.00
58 59 4.410400 GGTGCCTCCGGAACCCTG 62.410 72.222 12.15 0.00 0.00 4.45
59 60 4.658786 AGGTGCCTCCGGAACCCT 62.659 66.667 18.37 11.70 41.99 4.34
60 61 3.623703 GAAGGTGCCTCCGGAACCC 62.624 68.421 18.37 9.72 41.99 4.11
61 62 2.046217 GAAGGTGCCTCCGGAACC 60.046 66.667 14.93 14.93 41.99 3.62
62 63 1.079057 GAGAAGGTGCCTCCGGAAC 60.079 63.158 5.23 0.00 41.99 3.62
63 64 2.291043 GGAGAAGGTGCCTCCGGAA 61.291 63.158 5.23 0.00 40.58 4.30
64 65 2.683933 GGAGAAGGTGCCTCCGGA 60.684 66.667 2.93 2.93 40.58 5.14
68 69 2.266055 CGTGGGAGAAGGTGCCTC 59.734 66.667 0.00 0.00 37.61 4.70
69 70 2.203788 TCGTGGGAGAAGGTGCCT 60.204 61.111 0.00 0.00 37.61 4.75
70 71 2.047179 GTCGTGGGAGAAGGTGCC 60.047 66.667 0.00 0.00 37.11 5.01
71 72 2.047179 GGTCGTGGGAGAAGGTGC 60.047 66.667 0.00 0.00 0.00 5.01
72 73 0.602905 GTTGGTCGTGGGAGAAGGTG 60.603 60.000 0.00 0.00 0.00 4.00
73 74 1.752833 GTTGGTCGTGGGAGAAGGT 59.247 57.895 0.00 0.00 0.00 3.50
74 75 1.003718 GGTTGGTCGTGGGAGAAGG 60.004 63.158 0.00 0.00 0.00 3.46
75 76 0.324943 ATGGTTGGTCGTGGGAGAAG 59.675 55.000 0.00 0.00 0.00 2.85
76 77 0.036164 CATGGTTGGTCGTGGGAGAA 59.964 55.000 0.00 0.00 0.00 2.87
77 78 1.676968 CATGGTTGGTCGTGGGAGA 59.323 57.895 0.00 0.00 0.00 3.71
78 79 2.040544 GCATGGTTGGTCGTGGGAG 61.041 63.158 0.00 0.00 0.00 4.30
79 80 2.033448 GCATGGTTGGTCGTGGGA 59.967 61.111 0.00 0.00 0.00 4.37
80 81 2.282110 TGCATGGTTGGTCGTGGG 60.282 61.111 0.00 0.00 0.00 4.61
81 82 2.953821 GTGCATGGTTGGTCGTGG 59.046 61.111 0.00 0.00 0.00 4.94
82 83 2.555782 CGTGCATGGTTGGTCGTG 59.444 61.111 0.00 0.00 0.00 4.35
83 84 3.353836 GCGTGCATGGTTGGTCGT 61.354 61.111 8.27 0.00 0.00 4.34
84 85 4.444024 CGCGTGCATGGTTGGTCG 62.444 66.667 8.27 0.00 0.00 4.79
85 86 4.101790 CCGCGTGCATGGTTGGTC 62.102 66.667 8.27 0.00 0.00 4.02
86 87 4.947147 ACCGCGTGCATGGTTGGT 62.947 61.111 8.27 4.73 33.81 3.67
87 88 4.101790 GACCGCGTGCATGGTTGG 62.102 66.667 8.27 4.13 38.99 3.77
88 89 4.444024 CGACCGCGTGCATGGTTG 62.444 66.667 8.27 8.20 38.99 3.77
107 108 2.885676 CTTCGGCAATCGCATCCCG 61.886 63.158 0.00 0.00 41.24 5.14
108 109 3.025619 CTTCGGCAATCGCATCCC 58.974 61.111 0.00 0.00 41.24 3.85
109 110 2.329339 GCTTCGGCAATCGCATCC 59.671 61.111 0.00 0.00 41.24 3.51
119 120 1.996191 CTCTTAGTGAACTGCTTCGGC 59.004 52.381 0.00 0.00 42.19 5.54
120 121 2.231478 TCCTCTTAGTGAACTGCTTCGG 59.769 50.000 0.00 0.00 0.00 4.30
121 122 3.577649 TCCTCTTAGTGAACTGCTTCG 57.422 47.619 0.00 0.00 0.00 3.79
122 123 4.632153 TGTTCCTCTTAGTGAACTGCTTC 58.368 43.478 14.56 0.00 41.10 3.86
123 124 4.101741 ACTGTTCCTCTTAGTGAACTGCTT 59.898 41.667 16.79 4.34 41.41 3.91
124 125 3.643792 ACTGTTCCTCTTAGTGAACTGCT 59.356 43.478 16.79 7.88 41.41 4.24
125 126 3.996480 ACTGTTCCTCTTAGTGAACTGC 58.004 45.455 16.79 0.00 41.41 4.40
126 127 6.576662 TCTACTGTTCCTCTTAGTGAACTG 57.423 41.667 15.95 15.95 42.59 3.16
127 128 6.948886 TCATCTACTGTTCCTCTTAGTGAACT 59.051 38.462 14.56 0.00 41.10 3.01
128 129 7.030768 GTCATCTACTGTTCCTCTTAGTGAAC 58.969 42.308 9.30 9.30 40.94 3.18
129 130 6.719829 TGTCATCTACTGTTCCTCTTAGTGAA 59.280 38.462 0.00 0.00 0.00 3.18
130 131 6.246163 TGTCATCTACTGTTCCTCTTAGTGA 58.754 40.000 0.00 0.00 0.00 3.41
131 132 6.516739 TGTCATCTACTGTTCCTCTTAGTG 57.483 41.667 0.00 0.00 0.00 2.74
132 133 5.126384 GCTGTCATCTACTGTTCCTCTTAGT 59.874 44.000 0.00 0.00 0.00 2.24
133 134 5.359576 AGCTGTCATCTACTGTTCCTCTTAG 59.640 44.000 0.00 0.00 0.00 2.18
134 135 5.265191 AGCTGTCATCTACTGTTCCTCTTA 58.735 41.667 0.00 0.00 0.00 2.10
135 136 4.093011 AGCTGTCATCTACTGTTCCTCTT 58.907 43.478 0.00 0.00 0.00 2.85
136 137 3.707316 AGCTGTCATCTACTGTTCCTCT 58.293 45.455 0.00 0.00 0.00 3.69
137 138 4.037446 CCTAGCTGTCATCTACTGTTCCTC 59.963 50.000 0.00 0.00 0.00 3.71
138 139 3.957497 CCTAGCTGTCATCTACTGTTCCT 59.043 47.826 0.00 0.00 0.00 3.36
139 140 3.068873 CCCTAGCTGTCATCTACTGTTCC 59.931 52.174 0.00 0.00 0.00 3.62
140 141 3.702045 ACCCTAGCTGTCATCTACTGTTC 59.298 47.826 0.00 0.00 0.00 3.18
141 142 3.714144 ACCCTAGCTGTCATCTACTGTT 58.286 45.455 0.00 0.00 0.00 3.16
142 143 3.390175 ACCCTAGCTGTCATCTACTGT 57.610 47.619 0.00 0.00 0.00 3.55
143 144 4.279671 CCTAACCCTAGCTGTCATCTACTG 59.720 50.000 0.00 0.00 0.00 2.74
144 145 4.475345 CCTAACCCTAGCTGTCATCTACT 58.525 47.826 0.00 0.00 0.00 2.57
145 146 3.574826 CCCTAACCCTAGCTGTCATCTAC 59.425 52.174 0.00 0.00 0.00 2.59
146 147 3.206866 ACCCTAACCCTAGCTGTCATCTA 59.793 47.826 0.00 0.00 0.00 1.98
147 148 2.022918 ACCCTAACCCTAGCTGTCATCT 60.023 50.000 0.00 0.00 0.00 2.90
148 149 2.399580 ACCCTAACCCTAGCTGTCATC 58.600 52.381 0.00 0.00 0.00 2.92
149 150 2.505819 CAACCCTAACCCTAGCTGTCAT 59.494 50.000 0.00 0.00 0.00 3.06
150 151 1.906574 CAACCCTAACCCTAGCTGTCA 59.093 52.381 0.00 0.00 0.00 3.58
151 152 1.907255 ACAACCCTAACCCTAGCTGTC 59.093 52.381 0.00 0.00 0.00 3.51
152 153 1.628846 CACAACCCTAACCCTAGCTGT 59.371 52.381 0.00 0.00 0.00 4.40
153 154 1.679032 GCACAACCCTAACCCTAGCTG 60.679 57.143 0.00 0.00 0.00 4.24
154 155 0.618981 GCACAACCCTAACCCTAGCT 59.381 55.000 0.00 0.00 0.00 3.32
155 156 0.326927 TGCACAACCCTAACCCTAGC 59.673 55.000 0.00 0.00 0.00 3.42
156 157 1.906574 TCTGCACAACCCTAACCCTAG 59.093 52.381 0.00 0.00 0.00 3.02
157 158 1.906574 CTCTGCACAACCCTAACCCTA 59.093 52.381 0.00 0.00 0.00 3.53
158 159 0.693049 CTCTGCACAACCCTAACCCT 59.307 55.000 0.00 0.00 0.00 4.34
159 160 0.322546 CCTCTGCACAACCCTAACCC 60.323 60.000 0.00 0.00 0.00 4.11
160 161 0.322546 CCCTCTGCACAACCCTAACC 60.323 60.000 0.00 0.00 0.00 2.85
161 162 0.690762 TCCCTCTGCACAACCCTAAC 59.309 55.000 0.00 0.00 0.00 2.34
162 163 0.984230 CTCCCTCTGCACAACCCTAA 59.016 55.000 0.00 0.00 0.00 2.69
163 164 0.178903 ACTCCCTCTGCACAACCCTA 60.179 55.000 0.00 0.00 0.00 3.53
164 165 1.462238 ACTCCCTCTGCACAACCCT 60.462 57.895 0.00 0.00 0.00 4.34
165 166 1.302832 CACTCCCTCTGCACAACCC 60.303 63.158 0.00 0.00 0.00 4.11
166 167 0.321122 CTCACTCCCTCTGCACAACC 60.321 60.000 0.00 0.00 0.00 3.77
167 168 0.394565 ACTCACTCCCTCTGCACAAC 59.605 55.000 0.00 0.00 0.00 3.32
168 169 0.394192 CACTCACTCCCTCTGCACAA 59.606 55.000 0.00 0.00 0.00 3.33
169 170 0.469892 TCACTCACTCCCTCTGCACA 60.470 55.000 0.00 0.00 0.00 4.57
170 171 0.681733 TTCACTCACTCCCTCTGCAC 59.318 55.000 0.00 0.00 0.00 4.57
171 172 0.681733 GTTCACTCACTCCCTCTGCA 59.318 55.000 0.00 0.00 0.00 4.41
172 173 0.972883 AGTTCACTCACTCCCTCTGC 59.027 55.000 0.00 0.00 0.00 4.26
173 174 2.230992 CTCAGTTCACTCACTCCCTCTG 59.769 54.545 0.00 0.00 0.00 3.35
174 175 2.158385 ACTCAGTTCACTCACTCCCTCT 60.158 50.000 0.00 0.00 0.00 3.69
175 176 2.243810 ACTCAGTTCACTCACTCCCTC 58.756 52.381 0.00 0.00 0.00 4.30
176 177 2.390225 ACTCAGTTCACTCACTCCCT 57.610 50.000 0.00 0.00 0.00 4.20
177 178 3.056465 CCTAACTCAGTTCACTCACTCCC 60.056 52.174 0.00 0.00 0.00 4.30
178 179 3.574826 ACCTAACTCAGTTCACTCACTCC 59.425 47.826 0.00 0.00 0.00 3.85
179 180 4.278669 TGACCTAACTCAGTTCACTCACTC 59.721 45.833 0.00 0.00 0.00 3.51
180 181 4.038162 GTGACCTAACTCAGTTCACTCACT 59.962 45.833 11.60 0.00 0.00 3.41
181 182 4.038162 AGTGACCTAACTCAGTTCACTCAC 59.962 45.833 4.30 8.21 32.31 3.51
182 183 4.215908 AGTGACCTAACTCAGTTCACTCA 58.784 43.478 4.30 0.00 32.31 3.41
183 184 4.800784 GAGTGACCTAACTCAGTTCACTC 58.199 47.826 17.64 17.64 44.98 3.51
184 185 4.857509 GAGTGACCTAACTCAGTTCACT 57.142 45.455 9.26 9.26 44.98 3.41
192 193 1.135344 GCGAGTGGAGTGACCTAACTC 60.135 57.143 0.00 0.00 44.91 3.01
193 194 0.889306 GCGAGTGGAGTGACCTAACT 59.111 55.000 0.00 0.00 39.86 2.24
194 195 0.108756 GGCGAGTGGAGTGACCTAAC 60.109 60.000 0.00 0.00 39.86 2.34
195 196 0.541063 TGGCGAGTGGAGTGACCTAA 60.541 55.000 0.00 0.00 39.86 2.69
196 197 0.965866 CTGGCGAGTGGAGTGACCTA 60.966 60.000 0.00 0.00 39.86 3.08
197 198 2.203640 TGGCGAGTGGAGTGACCT 60.204 61.111 0.00 0.00 39.86 3.85
198 199 2.219325 CTCTGGCGAGTGGAGTGACC 62.219 65.000 0.00 0.00 39.54 4.02
199 200 1.214062 CTCTGGCGAGTGGAGTGAC 59.786 63.158 0.00 0.00 32.47 3.67
200 201 1.979155 CCTCTGGCGAGTGGAGTGA 60.979 63.158 11.03 0.00 35.17 3.41
201 202 2.575993 CCTCTGGCGAGTGGAGTG 59.424 66.667 11.03 0.00 35.17 3.51
202 203 3.386237 GCCTCTGGCGAGTGGAGT 61.386 66.667 19.60 0.00 39.62 3.85
212 213 4.767928 ACGACCTATATAAGAAGCCTCTGG 59.232 45.833 0.00 0.00 30.03 3.86
213 214 5.391097 CGACGACCTATATAAGAAGCCTCTG 60.391 48.000 0.00 0.00 30.03 3.35
214 215 4.696402 CGACGACCTATATAAGAAGCCTCT 59.304 45.833 0.00 0.00 0.00 3.69
215 216 4.142643 CCGACGACCTATATAAGAAGCCTC 60.143 50.000 0.00 0.00 0.00 4.70
216 217 3.757493 CCGACGACCTATATAAGAAGCCT 59.243 47.826 0.00 0.00 0.00 4.58
217 218 3.119566 CCCGACGACCTATATAAGAAGCC 60.120 52.174 0.00 0.00 0.00 4.35
218 219 3.505293 ACCCGACGACCTATATAAGAAGC 59.495 47.826 0.00 0.00 0.00 3.86
219 220 6.128063 CCTTACCCGACGACCTATATAAGAAG 60.128 46.154 0.00 0.00 0.00 2.85
220 221 5.707298 CCTTACCCGACGACCTATATAAGAA 59.293 44.000 0.00 0.00 0.00 2.52
221 222 5.013079 TCCTTACCCGACGACCTATATAAGA 59.987 44.000 0.00 0.00 0.00 2.10
222 223 5.248640 TCCTTACCCGACGACCTATATAAG 58.751 45.833 0.00 0.00 0.00 1.73
223 224 5.221925 ACTCCTTACCCGACGACCTATATAA 60.222 44.000 0.00 0.00 0.00 0.98
224 225 4.287067 ACTCCTTACCCGACGACCTATATA 59.713 45.833 0.00 0.00 0.00 0.86
225 226 3.073650 ACTCCTTACCCGACGACCTATAT 59.926 47.826 0.00 0.00 0.00 0.86
226 227 2.439507 ACTCCTTACCCGACGACCTATA 59.560 50.000 0.00 0.00 0.00 1.31
227 228 1.213926 ACTCCTTACCCGACGACCTAT 59.786 52.381 0.00 0.00 0.00 2.57
228 229 0.620556 ACTCCTTACCCGACGACCTA 59.379 55.000 0.00 0.00 0.00 3.08
229 230 0.679321 GACTCCTTACCCGACGACCT 60.679 60.000 0.00 0.00 0.00 3.85
230 231 1.805910 GACTCCTTACCCGACGACC 59.194 63.158 0.00 0.00 0.00 4.79
231 232 1.301677 ACGACTCCTTACCCGACGAC 61.302 60.000 0.00 0.00 0.00 4.34
232 233 1.003355 ACGACTCCTTACCCGACGA 60.003 57.895 0.00 0.00 0.00 4.20
233 234 1.136147 CACGACTCCTTACCCGACG 59.864 63.158 0.00 0.00 0.00 5.12
234 235 1.509923 CCACGACTCCTTACCCGAC 59.490 63.158 0.00 0.00 0.00 4.79
235 236 1.679977 CCCACGACTCCTTACCCGA 60.680 63.158 0.00 0.00 0.00 5.14
236 237 2.890371 CCCACGACTCCTTACCCG 59.110 66.667 0.00 0.00 0.00 5.28
237 238 2.582978 GCCCACGACTCCTTACCC 59.417 66.667 0.00 0.00 0.00 3.69
238 239 1.988406 AGGCCCACGACTCCTTACC 60.988 63.158 0.00 0.00 0.00 2.85
239 240 1.218316 CAGGCCCACGACTCCTTAC 59.782 63.158 0.00 0.00 0.00 2.34
240 241 1.987855 CCAGGCCCACGACTCCTTA 60.988 63.158 0.00 0.00 0.00 2.69
241 242 3.322466 CCAGGCCCACGACTCCTT 61.322 66.667 0.00 0.00 0.00 3.36
246 247 3.682292 CTAAGCCCAGGCCCACGAC 62.682 68.421 4.70 0.00 43.17 4.34
247 248 3.399181 CTAAGCCCAGGCCCACGA 61.399 66.667 4.70 0.00 43.17 4.35
248 249 4.489771 CCTAAGCCCAGGCCCACG 62.490 72.222 4.70 0.00 43.17 4.94
259 260 1.268283 ACTCAGACCTGGGCCTAAGC 61.268 60.000 4.53 0.00 33.38 3.09
260 261 0.827368 GACTCAGACCTGGGCCTAAG 59.173 60.000 4.53 0.00 33.38 2.18
261 262 0.970937 CGACTCAGACCTGGGCCTAA 60.971 60.000 4.53 0.00 33.38 2.69
262 263 1.379977 CGACTCAGACCTGGGCCTA 60.380 63.158 4.53 0.00 33.38 3.93
263 264 2.681778 CGACTCAGACCTGGGCCT 60.682 66.667 4.53 0.00 33.38 5.19
264 265 2.680352 TCGACTCAGACCTGGGCC 60.680 66.667 0.00 0.00 33.38 5.80
265 266 2.574399 GTCGACTCAGACCTGGGC 59.426 66.667 8.70 0.00 33.38 5.36
266 267 2.878429 CGTCGACTCAGACCTGGG 59.122 66.667 14.70 0.00 37.85 4.45
267 268 2.179517 GCGTCGACTCAGACCTGG 59.820 66.667 14.70 0.00 37.85 4.45
268 269 1.442857 GTGCGTCGACTCAGACCTG 60.443 63.158 14.70 0.00 37.85 4.00
269 270 1.579084 GAGTGCGTCGACTCAGACCT 61.579 60.000 14.70 5.41 41.84 3.85
270 271 1.154188 GAGTGCGTCGACTCAGACC 60.154 63.158 14.70 0.00 41.84 3.85
271 272 1.154188 GGAGTGCGTCGACTCAGAC 60.154 63.158 14.70 8.47 43.70 3.51
272 273 2.333417 GGGAGTGCGTCGACTCAGA 61.333 63.158 14.70 0.00 43.70 3.27
273 274 2.179517 GGGAGTGCGTCGACTCAG 59.820 66.667 14.70 0.00 43.70 3.35
274 275 3.733960 CGGGAGTGCGTCGACTCA 61.734 66.667 14.70 9.42 43.70 3.41
300 301 0.459585 TTGCCTCGCCTCGTCATAAC 60.460 55.000 0.00 0.00 0.00 1.89
301 302 0.179111 CTTGCCTCGCCTCGTCATAA 60.179 55.000 0.00 0.00 0.00 1.90
302 303 1.437573 CTTGCCTCGCCTCGTCATA 59.562 57.895 0.00 0.00 0.00 2.15
303 304 2.185350 CTTGCCTCGCCTCGTCAT 59.815 61.111 0.00 0.00 0.00 3.06
304 305 4.742201 GCTTGCCTCGCCTCGTCA 62.742 66.667 0.00 0.00 0.00 4.35
313 314 4.760047 TCCTTCGCCGCTTGCCTC 62.760 66.667 0.00 0.00 36.24 4.70
314 315 4.767255 CTCCTTCGCCGCTTGCCT 62.767 66.667 0.00 0.00 36.24 4.75
315 316 4.760047 TCTCCTTCGCCGCTTGCC 62.760 66.667 0.00 0.00 36.24 4.52
316 317 2.742372 TTCTCCTTCGCCGCTTGC 60.742 61.111 0.00 0.00 0.00 4.01
317 318 2.103042 CCTTCTCCTTCGCCGCTTG 61.103 63.158 0.00 0.00 0.00 4.01
318 319 2.232298 CTCCTTCTCCTTCGCCGCTT 62.232 60.000 0.00 0.00 0.00 4.68
319 320 2.680352 TCCTTCTCCTTCGCCGCT 60.680 61.111 0.00 0.00 0.00 5.52
320 321 2.202810 CTCCTTCTCCTTCGCCGC 60.203 66.667 0.00 0.00 0.00 6.53
321 322 2.202810 GCTCCTTCTCCTTCGCCG 60.203 66.667 0.00 0.00 0.00 6.46
322 323 2.202810 CGCTCCTTCTCCTTCGCC 60.203 66.667 0.00 0.00 0.00 5.54
323 324 2.888051 GCGCTCCTTCTCCTTCGC 60.888 66.667 0.00 0.00 35.82 4.70
324 325 2.580867 CGCGCTCCTTCTCCTTCG 60.581 66.667 5.56 0.00 0.00 3.79
325 326 2.888051 GCGCGCTCCTTCTCCTTC 60.888 66.667 26.67 0.00 0.00 3.46
326 327 4.803426 CGCGCGCTCCTTCTCCTT 62.803 66.667 30.48 0.00 0.00 3.36
328 329 2.126417 TATACGCGCGCTCCTTCTCC 62.126 60.000 32.58 0.00 0.00 3.71
329 330 0.997726 GTATACGCGCGCTCCTTCTC 60.998 60.000 32.58 8.63 0.00 2.87
330 331 1.008767 GTATACGCGCGCTCCTTCT 60.009 57.895 32.58 11.38 0.00 2.85
331 332 0.868602 TTGTATACGCGCGCTCCTTC 60.869 55.000 32.58 15.86 0.00 3.46
332 333 1.140161 TTGTATACGCGCGCTCCTT 59.860 52.632 32.58 13.11 0.00 3.36
333 334 1.588139 GTTGTATACGCGCGCTCCT 60.588 57.895 32.58 13.56 0.00 3.69
334 335 1.538117 GAGTTGTATACGCGCGCTCC 61.538 60.000 32.58 15.98 0.00 4.70
335 336 1.538117 GGAGTTGTATACGCGCGCTC 61.538 60.000 32.58 24.39 0.00 5.03
336 337 1.588139 GGAGTTGTATACGCGCGCT 60.588 57.895 32.58 20.49 0.00 5.92
337 338 1.538117 GAGGAGTTGTATACGCGCGC 61.538 60.000 32.58 23.91 0.00 6.86
338 339 0.029035 AGAGGAGTTGTATACGCGCG 59.971 55.000 30.96 30.96 0.00 6.86
339 340 1.334243 AGAGAGGAGTTGTATACGCGC 59.666 52.381 5.73 0.00 0.00 6.86
340 341 2.612672 TGAGAGAGGAGTTGTATACGCG 59.387 50.000 3.53 3.53 0.00 6.01
341 342 4.498345 CCTTGAGAGAGGAGTTGTATACGC 60.498 50.000 0.00 0.00 39.25 4.42
342 343 4.641094 ACCTTGAGAGAGGAGTTGTATACG 59.359 45.833 0.00 0.00 39.25 3.06
343 344 5.068067 GGACCTTGAGAGAGGAGTTGTATAC 59.932 48.000 0.00 0.00 39.25 1.47
344 345 5.202004 GGACCTTGAGAGAGGAGTTGTATA 58.798 45.833 0.00 0.00 39.25 1.47
345 346 4.027437 GGACCTTGAGAGAGGAGTTGTAT 58.973 47.826 0.00 0.00 39.25 2.29
346 347 3.432378 GGACCTTGAGAGAGGAGTTGTA 58.568 50.000 0.00 0.00 39.25 2.41
347 348 2.252714 GGACCTTGAGAGAGGAGTTGT 58.747 52.381 0.00 0.00 39.25 3.32
348 349 1.552792 GGGACCTTGAGAGAGGAGTTG 59.447 57.143 0.00 0.00 39.25 3.16
349 350 1.150135 TGGGACCTTGAGAGAGGAGTT 59.850 52.381 0.00 0.00 39.25 3.01
350 351 0.787084 TGGGACCTTGAGAGAGGAGT 59.213 55.000 0.00 0.00 39.25 3.85
351 352 1.944177 TTGGGACCTTGAGAGAGGAG 58.056 55.000 0.00 0.00 39.25 3.69
352 353 2.191400 CATTGGGACCTTGAGAGAGGA 58.809 52.381 0.00 0.00 39.25 3.71
353 354 1.211457 CCATTGGGACCTTGAGAGAGG 59.789 57.143 0.00 0.00 42.75 3.69
354 355 1.407989 GCCATTGGGACCTTGAGAGAG 60.408 57.143 4.53 0.00 35.59 3.20
355 356 0.620556 GCCATTGGGACCTTGAGAGA 59.379 55.000 4.53 0.00 35.59 3.10
356 357 0.329261 TGCCATTGGGACCTTGAGAG 59.671 55.000 4.53 0.00 35.59 3.20
357 358 0.776810 TTGCCATTGGGACCTTGAGA 59.223 50.000 4.53 0.00 35.59 3.27
358 359 1.479323 CATTGCCATTGGGACCTTGAG 59.521 52.381 4.53 0.00 35.59 3.02
359 360 1.203162 ACATTGCCATTGGGACCTTGA 60.203 47.619 4.53 0.00 35.59 3.02
360 361 1.066716 CACATTGCCATTGGGACCTTG 60.067 52.381 4.53 2.43 35.59 3.61
361 362 1.269012 CACATTGCCATTGGGACCTT 58.731 50.000 4.53 0.00 35.59 3.50
362 363 0.615544 CCACATTGCCATTGGGACCT 60.616 55.000 4.53 0.00 35.59 3.85
363 364 0.904394 ACCACATTGCCATTGGGACC 60.904 55.000 4.53 0.00 34.41 4.46
364 365 1.750778 CTACCACATTGCCATTGGGAC 59.249 52.381 4.53 0.00 34.41 4.46
365 366 1.638070 TCTACCACATTGCCATTGGGA 59.362 47.619 4.53 0.00 34.41 4.37
366 367 2.026641 CTCTACCACATTGCCATTGGG 58.973 52.381 4.53 0.00 34.41 4.12
367 368 1.406539 GCTCTACCACATTGCCATTGG 59.593 52.381 0.00 0.00 36.39 3.16
368 369 2.093890 TGCTCTACCACATTGCCATTG 58.906 47.619 0.00 0.00 0.00 2.82
369 370 2.372264 CTGCTCTACCACATTGCCATT 58.628 47.619 0.00 0.00 0.00 3.16
370 371 2.020694 GCTGCTCTACCACATTGCCAT 61.021 52.381 0.00 0.00 0.00 4.40
371 372 0.677731 GCTGCTCTACCACATTGCCA 60.678 55.000 0.00 0.00 0.00 4.92
372 373 1.379642 GGCTGCTCTACCACATTGCC 61.380 60.000 0.00 0.00 0.00 4.52
373 374 1.379642 GGGCTGCTCTACCACATTGC 61.380 60.000 0.00 0.00 0.00 3.56
374 375 0.254178 AGGGCTGCTCTACCACATTG 59.746 55.000 0.00 0.00 0.00 2.82
375 376 0.995024 AAGGGCTGCTCTACCACATT 59.005 50.000 0.60 0.00 0.00 2.71
376 377 1.879575 TAAGGGCTGCTCTACCACAT 58.120 50.000 0.60 0.00 0.00 3.21
377 378 1.879575 ATAAGGGCTGCTCTACCACA 58.120 50.000 0.60 0.00 0.00 4.17
378 379 4.417426 TTTATAAGGGCTGCTCTACCAC 57.583 45.455 0.60 0.00 0.00 4.16
379 380 4.141482 CCTTTTATAAGGGCTGCTCTACCA 60.141 45.833 0.60 0.00 46.10 3.25
380 381 4.390264 CCTTTTATAAGGGCTGCTCTACC 58.610 47.826 0.60 0.00 46.10 3.18
392 393 7.440856 GGAGTGAGAATGAGAGCCTTTTATAAG 59.559 40.741 0.00 0.00 0.00 1.73
393 394 7.092891 TGGAGTGAGAATGAGAGCCTTTTATAA 60.093 37.037 0.00 0.00 0.00 0.98
394 395 6.384015 TGGAGTGAGAATGAGAGCCTTTTATA 59.616 38.462 0.00 0.00 0.00 0.98
395 396 5.190528 TGGAGTGAGAATGAGAGCCTTTTAT 59.809 40.000 0.00 0.00 0.00 1.40
396 397 4.532126 TGGAGTGAGAATGAGAGCCTTTTA 59.468 41.667 0.00 0.00 0.00 1.52
397 398 3.328931 TGGAGTGAGAATGAGAGCCTTTT 59.671 43.478 0.00 0.00 0.00 2.27
398 399 2.909006 TGGAGTGAGAATGAGAGCCTTT 59.091 45.455 0.00 0.00 0.00 3.11
399 400 2.235898 GTGGAGTGAGAATGAGAGCCTT 59.764 50.000 0.00 0.00 0.00 4.35
400 401 1.830477 GTGGAGTGAGAATGAGAGCCT 59.170 52.381 0.00 0.00 0.00 4.58
401 402 1.830477 AGTGGAGTGAGAATGAGAGCC 59.170 52.381 0.00 0.00 0.00 4.70
402 403 3.490761 GCTAGTGGAGTGAGAATGAGAGC 60.491 52.174 0.00 0.00 0.00 4.09
403 404 3.698539 TGCTAGTGGAGTGAGAATGAGAG 59.301 47.826 0.00 0.00 0.00 3.20
404 405 3.698539 CTGCTAGTGGAGTGAGAATGAGA 59.301 47.826 0.00 0.00 0.00 3.27
405 406 3.446873 ACTGCTAGTGGAGTGAGAATGAG 59.553 47.826 0.00 0.00 43.30 2.90
406 407 3.435275 ACTGCTAGTGGAGTGAGAATGA 58.565 45.455 0.00 0.00 43.30 2.57
407 408 3.883830 ACTGCTAGTGGAGTGAGAATG 57.116 47.619 0.00 0.00 43.30 2.67
408 409 4.343526 CCATACTGCTAGTGGAGTGAGAAT 59.656 45.833 0.57 0.00 44.61 2.40
409 410 3.701542 CCATACTGCTAGTGGAGTGAGAA 59.298 47.826 0.57 0.00 44.61 2.87
410 411 3.291584 CCATACTGCTAGTGGAGTGAGA 58.708 50.000 0.57 0.00 44.61 3.27
411 412 3.027412 ACCATACTGCTAGTGGAGTGAG 58.973 50.000 3.46 0.00 44.61 3.51
412 413 3.101643 ACCATACTGCTAGTGGAGTGA 57.898 47.619 3.46 0.00 44.61 3.41
413 414 3.954904 AGTACCATACTGCTAGTGGAGTG 59.045 47.826 3.46 0.00 44.61 3.51
414 415 4.252570 AGTACCATACTGCTAGTGGAGT 57.747 45.455 3.46 0.67 46.57 3.85
415 416 6.096423 TGTTTAGTACCATACTGCTAGTGGAG 59.904 42.308 3.46 0.00 39.81 3.86
416 417 5.953548 TGTTTAGTACCATACTGCTAGTGGA 59.046 40.000 3.46 0.00 39.81 4.02
417 418 6.216801 TGTTTAGTACCATACTGCTAGTGG 57.783 41.667 0.00 0.00 39.81 4.00
418 419 7.064253 GGTTTGTTTAGTACCATACTGCTAGTG 59.936 40.741 0.00 0.00 39.81 2.74
419 420 7.101700 GGTTTGTTTAGTACCATACTGCTAGT 58.898 38.462 0.00 0.00 39.81 2.57
420 421 7.064253 GTGGTTTGTTTAGTACCATACTGCTAG 59.936 40.741 0.00 0.00 43.33 3.42
421 422 6.875195 GTGGTTTGTTTAGTACCATACTGCTA 59.125 38.462 0.00 0.00 43.33 3.49
422 423 5.704053 GTGGTTTGTTTAGTACCATACTGCT 59.296 40.000 0.00 0.00 43.33 4.24
423 424 5.704053 AGTGGTTTGTTTAGTACCATACTGC 59.296 40.000 0.00 0.00 43.33 4.40
424 425 7.581476 CAAGTGGTTTGTTTAGTACCATACTG 58.419 38.462 0.00 0.00 43.33 2.74
425 426 6.206048 GCAAGTGGTTTGTTTAGTACCATACT 59.794 38.462 0.00 0.00 43.33 2.12
426 427 6.376177 GCAAGTGGTTTGTTTAGTACCATAC 58.624 40.000 0.00 0.00 43.33 2.39
427 428 5.474189 GGCAAGTGGTTTGTTTAGTACCATA 59.526 40.000 0.00 0.00 43.33 2.74
428 429 4.279922 GGCAAGTGGTTTGTTTAGTACCAT 59.720 41.667 0.00 0.00 43.33 3.55
429 430 3.633065 GGCAAGTGGTTTGTTTAGTACCA 59.367 43.478 0.00 0.00 39.53 3.25
430 431 3.633065 TGGCAAGTGGTTTGTTTAGTACC 59.367 43.478 0.00 0.00 39.08 3.34
431 432 4.904253 TGGCAAGTGGTTTGTTTAGTAC 57.096 40.909 0.00 0.00 39.08 2.73
432 433 4.261825 GCATGGCAAGTGGTTTGTTTAGTA 60.262 41.667 0.00 0.00 39.08 1.82
566 567 8.129211 GGTTCTGTATATCACCTGCAAAATAAC 58.871 37.037 0.00 0.00 0.00 1.89
575 576 6.655003 ACAAACTTGGTTCTGTATATCACCTG 59.345 38.462 0.00 0.00 0.00 4.00
620 621 0.161870 GAGAGAACGACACGCTTTGC 59.838 55.000 0.00 0.00 0.00 3.68
626 627 3.826236 TTCCTTAGAGAGAACGACACG 57.174 47.619 0.00 0.00 0.00 4.49
670 671 0.312102 TGAGTGAGTGAGTGAGTGCG 59.688 55.000 0.00 0.00 0.00 5.34
672 673 2.620585 TGAGTGAGTGAGTGAGTGAGTG 59.379 50.000 0.00 0.00 0.00 3.51
673 674 2.621055 GTGAGTGAGTGAGTGAGTGAGT 59.379 50.000 0.00 0.00 0.00 3.41
674 675 2.884012 AGTGAGTGAGTGAGTGAGTGAG 59.116 50.000 0.00 0.00 0.00 3.51
675 676 2.881513 GAGTGAGTGAGTGAGTGAGTGA 59.118 50.000 0.00 0.00 0.00 3.41
676 677 2.620585 TGAGTGAGTGAGTGAGTGAGTG 59.379 50.000 0.00 0.00 0.00 3.51
677 678 2.937519 TGAGTGAGTGAGTGAGTGAGT 58.062 47.619 0.00 0.00 0.00 3.41
678 679 3.998099 TTGAGTGAGTGAGTGAGTGAG 57.002 47.619 0.00 0.00 0.00 3.51
679 680 3.891366 TGATTGAGTGAGTGAGTGAGTGA 59.109 43.478 0.00 0.00 0.00 3.41
680 681 4.248691 TGATTGAGTGAGTGAGTGAGTG 57.751 45.455 0.00 0.00 0.00 3.51
681 682 4.818642 CATGATTGAGTGAGTGAGTGAGT 58.181 43.478 0.00 0.00 0.00 3.41
682 683 3.617706 GCATGATTGAGTGAGTGAGTGAG 59.382 47.826 0.00 0.00 0.00 3.51
683 684 3.260128 AGCATGATTGAGTGAGTGAGTGA 59.740 43.478 0.00 0.00 0.00 3.41
684 685 3.597255 AGCATGATTGAGTGAGTGAGTG 58.403 45.455 0.00 0.00 0.00 3.51
685 686 3.514706 AGAGCATGATTGAGTGAGTGAGT 59.485 43.478 0.00 0.00 0.00 3.41
686 687 4.126208 AGAGCATGATTGAGTGAGTGAG 57.874 45.455 0.00 0.00 0.00 3.51
687 688 5.866159 ATAGAGCATGATTGAGTGAGTGA 57.134 39.130 0.00 0.00 0.00 3.41
824 825 7.879160 ACCAACAACCGAATTAATGTACTCTTA 59.121 33.333 0.00 0.00 0.00 2.10
872 880 6.267496 AGCGCATTAAAGTACCAAGATTTT 57.733 33.333 11.47 0.00 0.00 1.82
880 888 5.205565 GCTGATTTAGCGCATTAAAGTACC 58.794 41.667 11.47 0.00 43.63 3.34
938 946 3.866883 TGTGTGATATGCGAGTTCTGA 57.133 42.857 0.00 0.00 0.00 3.27
1013 1024 0.325272 GAGGACCAGGAGAAACACCC 59.675 60.000 0.00 0.00 0.00 4.61
1020 1031 1.984570 CAAGGCGAGGACCAGGAGA 60.985 63.158 0.00 0.00 0.00 3.71
1028 1039 1.329913 TAGCATGAGCAAGGCGAGGA 61.330 55.000 0.00 0.00 45.49 3.71
1074 1085 4.933505 TTTGTGGCATGAGATTGTGAAA 57.066 36.364 0.00 0.00 0.00 2.69
1090 1109 4.818642 TCACAACATGGCCATTATTTGTG 58.181 39.130 34.44 34.44 43.29 3.33
1097 1122 1.745087 GTCGATCACAACATGGCCATT 59.255 47.619 17.92 0.00 0.00 3.16
1101 1126 1.331756 GATGGTCGATCACAACATGGC 59.668 52.381 0.00 0.00 0.00 4.40
1102 1127 1.942657 GGATGGTCGATCACAACATGG 59.057 52.381 0.00 0.00 31.91 3.66
1103 1128 1.942657 GGGATGGTCGATCACAACATG 59.057 52.381 0.00 0.00 34.18 3.21
1104 1129 1.134098 GGGGATGGTCGATCACAACAT 60.134 52.381 0.00 0.00 35.99 2.71
1105 1130 0.251916 GGGGATGGTCGATCACAACA 59.748 55.000 0.00 0.00 35.99 3.33
1106 1131 0.541863 AGGGGATGGTCGATCACAAC 59.458 55.000 0.00 0.00 35.99 3.32
1107 1132 1.285280 AAGGGGATGGTCGATCACAA 58.715 50.000 0.00 0.00 35.99 3.33
1108 1133 1.209504 GAAAGGGGATGGTCGATCACA 59.790 52.381 0.00 0.00 35.99 3.58
1109 1134 1.486726 AGAAAGGGGATGGTCGATCAC 59.513 52.381 0.00 0.00 33.07 3.06
1110 1135 1.879575 AGAAAGGGGATGGTCGATCA 58.120 50.000 0.00 0.00 31.91 2.92
1111 1136 2.170607 TGAAGAAAGGGGATGGTCGATC 59.829 50.000 0.00 0.00 0.00 3.69
1112 1137 2.196595 TGAAGAAAGGGGATGGTCGAT 58.803 47.619 0.00 0.00 0.00 3.59
1113 1138 1.651737 TGAAGAAAGGGGATGGTCGA 58.348 50.000 0.00 0.00 0.00 4.20
1114 1139 2.292267 CATGAAGAAAGGGGATGGTCG 58.708 52.381 0.00 0.00 0.00 4.79
1238 1263 2.685829 CGCCACATTACAAGCGGCA 61.686 57.895 1.45 0.00 44.64 5.69
1242 1267 1.083489 TAGCACGCCACATTACAAGC 58.917 50.000 0.00 0.00 0.00 4.01
1313 1338 2.995939 CTGGCGTTCGTATATCATGCAT 59.004 45.455 0.00 0.00 0.00 3.96
1324 1349 3.254024 ATTGGAGGCTGGCGTTCGT 62.254 57.895 0.00 0.00 0.00 3.85
1355 1380 6.752335 TTTGCGATTTTGCATATCATTAGC 57.248 33.333 9.27 5.52 45.78 3.09
1356 1381 7.383029 ACCATTTGCGATTTTGCATATCATTAG 59.617 33.333 9.27 0.00 45.78 1.73
1357 1382 7.169476 CACCATTTGCGATTTTGCATATCATTA 59.831 33.333 9.27 0.00 45.78 1.90
1358 1383 6.018588 CACCATTTGCGATTTTGCATATCATT 60.019 34.615 9.27 0.00 45.78 2.57
1359 1384 5.464057 CACCATTTGCGATTTTGCATATCAT 59.536 36.000 9.27 0.00 45.78 2.45
1361 1386 4.805192 ACACCATTTGCGATTTTGCATATC 59.195 37.500 0.00 0.00 45.78 1.63
1363 1388 4.185467 ACACCATTTGCGATTTTGCATA 57.815 36.364 0.00 0.00 45.78 3.14
1364 1389 3.042871 ACACCATTTGCGATTTTGCAT 57.957 38.095 0.00 0.00 45.78 3.96
1366 1391 2.345341 GCTACACCATTTGCGATTTTGC 59.655 45.455 0.00 0.00 0.00 3.68
1367 1392 3.573598 TGCTACACCATTTGCGATTTTG 58.426 40.909 0.00 0.00 0.00 2.44
1368 1393 3.836949 CTGCTACACCATTTGCGATTTT 58.163 40.909 0.00 0.00 0.00 1.82
1407 1568 7.171508 TCACTCTTCATAATTAACATGCCGATC 59.828 37.037 0.00 0.00 0.00 3.69
1417 1578 8.559536 GCCGAATTCATCACTCTTCATAATTAA 58.440 33.333 6.22 0.00 0.00 1.40
1418 1579 7.173218 GGCCGAATTCATCACTCTTCATAATTA 59.827 37.037 6.22 0.00 0.00 1.40
1419 1580 6.016777 GGCCGAATTCATCACTCTTCATAATT 60.017 38.462 6.22 0.00 0.00 1.40
1440 1601 1.750193 TAATTCAAGAAGCCAGGCCG 58.250 50.000 8.22 0.00 0.00 6.13
1442 1603 7.334671 GGTAGTATATAATTCAAGAAGCCAGGC 59.665 40.741 1.84 1.84 0.00 4.85
1494 1655 9.184523 TGGCTTTGCAATTTTATACACTAGTAT 57.815 29.630 0.00 0.00 43.23 2.12
1495 1656 8.568676 TGGCTTTGCAATTTTATACACTAGTA 57.431 30.769 0.00 0.00 34.10 1.82
1496 1657 7.461182 TGGCTTTGCAATTTTATACACTAGT 57.539 32.000 0.00 0.00 0.00 2.57
1514 1675 5.008613 CGCTAACATTATGTACCATGGCTTT 59.991 40.000 13.04 0.00 0.00 3.51
1519 1680 5.984233 ACACGCTAACATTATGTACCATG 57.016 39.130 0.00 0.00 0.00 3.66
1563 1730 4.898861 AGATGTCCCTCTTGATCTCTAACC 59.101 45.833 0.00 0.00 0.00 2.85
1583 1752 5.080337 TCTGTACTGGAACTTGTGAGAGAT 58.920 41.667 0.00 0.00 0.00 2.75
1591 1760 3.829601 ACCTCTCTCTGTACTGGAACTTG 59.170 47.826 0.00 0.00 0.00 3.16
1599 1768 2.541233 ATGCCACCTCTCTCTGTACT 57.459 50.000 0.00 0.00 0.00 2.73
1613 1782 1.221840 GCCTTCCTCTCGAATGCCA 59.778 57.895 0.00 0.00 36.43 4.92
1616 1785 2.906691 AGATGCCTTCCTCTCGAATG 57.093 50.000 0.00 0.00 0.00 2.67
1618 1787 3.261897 AGAAAAGATGCCTTCCTCTCGAA 59.738 43.478 0.00 0.00 0.00 3.71
1619 1788 2.834549 AGAAAAGATGCCTTCCTCTCGA 59.165 45.455 0.00 0.00 0.00 4.04
1620 1789 2.935201 CAGAAAAGATGCCTTCCTCTCG 59.065 50.000 0.00 0.00 0.00 4.04
1646 1815 2.502142 TCAAGCCAGATCAACAGCAT 57.498 45.000 0.00 0.00 0.00 3.79
1647 1816 2.026542 AGATCAAGCCAGATCAACAGCA 60.027 45.455 15.82 0.00 45.39 4.41
1648 1817 2.355132 CAGATCAAGCCAGATCAACAGC 59.645 50.000 15.82 0.00 45.39 4.40
1649 1818 3.870274 TCAGATCAAGCCAGATCAACAG 58.130 45.455 15.82 5.53 45.39 3.16
1664 1833 7.011295 GGAGATGAGAGAATGTTGTTTCAGATC 59.989 40.741 0.00 0.00 0.00 2.75
1665 1834 6.822676 GGAGATGAGAGAATGTTGTTTCAGAT 59.177 38.462 0.00 0.00 0.00 2.90
1678 1847 2.665165 GAGGCTGAGGAGATGAGAGAA 58.335 52.381 0.00 0.00 0.00 2.87
1679 1848 1.133513 GGAGGCTGAGGAGATGAGAGA 60.134 57.143 0.00 0.00 0.00 3.10
1685 1854 1.074623 CCAGGGAGGCTGAGGAGAT 60.075 63.158 0.00 0.00 0.00 2.75
1739 1913 2.561373 GTTCAAAGGCTTCCGGCG 59.439 61.111 0.00 0.00 42.94 6.46
1740 1914 2.561373 CGTTCAAAGGCTTCCGGC 59.439 61.111 0.00 0.00 40.90 6.13
1741 1915 3.263941 CCGTTCAAAGGCTTCCGG 58.736 61.111 0.00 6.71 0.00 5.14
1758 1932 4.681978 ACCTGCCACTTCGGTCGC 62.682 66.667 0.00 0.00 36.97 5.19
1759 1933 2.030562 AACCTGCCACTTCGGTCG 59.969 61.111 0.00 0.00 36.97 4.79
1760 1934 1.227853 ACAACCTGCCACTTCGGTC 60.228 57.895 0.00 0.00 36.97 4.79
1761 1935 1.227853 GACAACCTGCCACTTCGGT 60.228 57.895 0.00 0.00 36.97 4.69
1762 1936 1.966451 GGACAACCTGCCACTTCGG 60.966 63.158 0.00 0.00 38.11 4.30
1763 1937 0.817634 TTGGACAACCTGCCACTTCG 60.818 55.000 0.00 0.00 37.04 3.79
1764 1938 0.954452 CTTGGACAACCTGCCACTTC 59.046 55.000 0.00 0.00 37.04 3.01
1765 1939 0.550914 TCTTGGACAACCTGCCACTT 59.449 50.000 0.00 0.00 37.04 3.16
1766 1940 0.550914 TTCTTGGACAACCTGCCACT 59.449 50.000 0.00 0.00 37.04 4.00
1767 1941 0.954452 CTTCTTGGACAACCTGCCAC 59.046 55.000 0.00 0.00 37.04 5.01
1768 1942 0.843309 TCTTCTTGGACAACCTGCCA 59.157 50.000 0.00 0.00 37.04 4.92
1769 1943 1.072331 TCTCTTCTTGGACAACCTGCC 59.928 52.381 0.00 0.00 37.04 4.85
1770 1944 2.147150 GTCTCTTCTTGGACAACCTGC 58.853 52.381 0.00 0.00 37.04 4.85
1771 1945 3.556004 GGAGTCTCTTCTTGGACAACCTG 60.556 52.174 0.00 0.00 37.04 4.00
1772 1946 2.635427 GGAGTCTCTTCTTGGACAACCT 59.365 50.000 0.00 0.00 37.04 3.50
1773 1947 2.368875 TGGAGTCTCTTCTTGGACAACC 59.631 50.000 0.00 0.00 35.18 3.77
1774 1948 3.753294 TGGAGTCTCTTCTTGGACAAC 57.247 47.619 0.00 0.00 35.18 3.32
1775 1949 3.711704 ACTTGGAGTCTCTTCTTGGACAA 59.288 43.478 0.00 0.00 35.18 3.18
1776 1950 3.309296 ACTTGGAGTCTCTTCTTGGACA 58.691 45.455 0.00 0.00 35.18 4.02
1777 1951 4.525100 ACTACTTGGAGTCTCTTCTTGGAC 59.475 45.833 0.00 0.00 0.00 4.02
1778 1952 4.742012 ACTACTTGGAGTCTCTTCTTGGA 58.258 43.478 0.00 0.00 0.00 3.53
1779 1953 5.712917 AGTACTACTTGGAGTCTCTTCTTGG 59.287 44.000 0.00 0.00 0.00 3.61
1780 1954 6.827586 AGTACTACTTGGAGTCTCTTCTTG 57.172 41.667 0.00 0.00 0.00 3.02
1781 1955 7.825761 GTCTAGTACTACTTGGAGTCTCTTCTT 59.174 40.741 0.00 0.00 0.00 2.52
1782 1956 7.038160 TGTCTAGTACTACTTGGAGTCTCTTCT 60.038 40.741 0.00 0.00 0.00 2.85
1783 1957 7.104939 TGTCTAGTACTACTTGGAGTCTCTTC 58.895 42.308 0.00 0.00 0.00 2.87
1784 1958 7.018487 TGTCTAGTACTACTTGGAGTCTCTT 57.982 40.000 0.00 0.00 0.00 2.85
1785 1959 6.623979 TGTCTAGTACTACTTGGAGTCTCT 57.376 41.667 0.00 0.00 0.00 3.10
1786 1960 6.238538 GCATGTCTAGTACTACTTGGAGTCTC 60.239 46.154 0.00 0.00 0.00 3.36
1787 1961 5.591067 GCATGTCTAGTACTACTTGGAGTCT 59.409 44.000 0.00 0.00 0.00 3.24
1788 1962 5.357314 TGCATGTCTAGTACTACTTGGAGTC 59.643 44.000 0.00 0.00 0.00 3.36
1789 1963 5.125739 GTGCATGTCTAGTACTACTTGGAGT 59.874 44.000 0.00 0.00 0.00 3.85
1790 1964 5.125578 TGTGCATGTCTAGTACTACTTGGAG 59.874 44.000 0.00 0.00 0.00 3.86
1791 1965 5.014202 TGTGCATGTCTAGTACTACTTGGA 58.986 41.667 0.00 0.36 0.00 3.53
1792 1966 5.324784 TGTGCATGTCTAGTACTACTTGG 57.675 43.478 0.00 0.00 0.00 3.61
1793 1967 6.183360 GCTTTGTGCATGTCTAGTACTACTTG 60.183 42.308 0.00 3.14 42.31 3.16
1794 1968 5.869888 GCTTTGTGCATGTCTAGTACTACTT 59.130 40.000 0.00 0.00 42.31 2.24
1795 1969 5.411781 GCTTTGTGCATGTCTAGTACTACT 58.588 41.667 0.00 0.00 42.31 2.57
1796 1970 4.567159 GGCTTTGTGCATGTCTAGTACTAC 59.433 45.833 0.00 0.00 45.15 2.73
1797 1971 4.466370 AGGCTTTGTGCATGTCTAGTACTA 59.534 41.667 1.89 1.89 45.15 1.82
1798 1972 3.261897 AGGCTTTGTGCATGTCTAGTACT 59.738 43.478 0.00 0.00 45.15 2.73
1799 1973 3.600388 AGGCTTTGTGCATGTCTAGTAC 58.400 45.455 0.00 0.00 45.15 2.73
1800 1974 3.981071 AGGCTTTGTGCATGTCTAGTA 57.019 42.857 0.00 0.00 45.15 1.82
1804 1978 3.354948 TCATAGGCTTTGTGCATGTCT 57.645 42.857 4.86 0.00 45.15 3.41
1915 2089 8.576442 CAGTTGAACCAAATCCTGTAATTAACT 58.424 33.333 0.00 0.00 0.00 2.24
1941 2115 1.534729 AAACGCCTCTGTTTCATCCC 58.465 50.000 0.00 0.00 37.50 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.