Multiple sequence alignment - TraesCS6B01G419100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G419100 chr6B 100.000 7234 0 0 1 7234 690960628 690967861 0.000000e+00 13359.0
1 TraesCS6B01G419100 chr6B 86.207 87 10 2 344 428 281611962 281611876 7.730000e-15 93.5
2 TraesCS6B01G419100 chr6D 94.536 4923 215 14 2315 7234 454487160 454492031 0.000000e+00 7552.0
3 TraesCS6B01G419100 chr6D 83.993 1087 91 28 492 1508 454485764 454486837 0.000000e+00 966.0
4 TraesCS6B01G419100 chr6D 91.837 343 19 5 1 341 454485368 454485703 3.060000e-128 470.0
5 TraesCS6B01G419100 chr6D 94.702 151 7 1 2007 2156 454487011 454487161 4.360000e-57 233.0
6 TraesCS6B01G419100 chr6D 86.047 86 9 3 349 434 62819548 62819466 1.000000e-13 89.8
7 TraesCS6B01G419100 chr6A 95.828 4602 149 16 2315 6914 600694533 600699093 0.000000e+00 7395.0
8 TraesCS6B01G419100 chr6A 82.635 812 103 32 721 1508 600693107 600693904 0.000000e+00 684.0
9 TraesCS6B01G419100 chr6A 87.320 347 25 9 1 345 600676293 600676622 5.300000e-101 379.0
10 TraesCS6B01G419100 chr6A 92.174 230 15 2 1515 1744 600694253 600694479 9.050000e-84 322.0
11 TraesCS6B01G419100 chr6A 95.833 192 7 1 7043 7234 600701184 600701374 7.050000e-80 309.0
12 TraesCS6B01G419100 chr6A 97.727 132 3 0 6910 7041 600700968 600701099 2.030000e-55 228.0
13 TraesCS6B01G419100 chr6A 96.610 59 2 0 2098 2156 600694476 600694534 1.660000e-16 99.0
14 TraesCS6B01G419100 chr3D 88.508 905 90 7 2984 3884 504056987 504057881 0.000000e+00 1083.0
15 TraesCS6B01G419100 chr3D 83.183 886 104 10 4365 5248 504058308 504059150 0.000000e+00 769.0
16 TraesCS6B01G419100 chr3D 85.601 632 68 9 3879 4503 504057960 504058575 6.120000e-180 641.0
17 TraesCS6B01G419100 chr3D 84.088 685 76 17 2316 2987 504056281 504056945 1.320000e-176 630.0
18 TraesCS6B01G419100 chr3D 85.744 477 57 6 5771 6240 504059483 504059955 1.810000e-135 494.0
19 TraesCS6B01G419100 chr3D 76.048 1073 167 49 962 1970 504054980 504056026 6.570000e-130 475.0
20 TraesCS6B01G419100 chr3D 93.413 167 10 1 2154 2320 537154864 537154699 5.610000e-61 246.0
21 TraesCS6B01G419100 chr3D 89.011 91 8 2 343 431 609944971 609945061 2.130000e-20 111.0
22 TraesCS6B01G419100 chr3D 83.908 87 11 3 344 428 79601501 79601586 6.020000e-11 80.5
23 TraesCS6B01G419100 chr3B 87.845 905 96 7 2984 3884 665466485 665467379 0.000000e+00 1050.0
24 TraesCS6B01G419100 chr3B 82.957 886 109 9 4365 5248 665467806 665468651 0.000000e+00 761.0
25 TraesCS6B01G419100 chr3B 85.918 632 69 8 3879 4503 665467458 665468076 0.000000e+00 656.0
26 TraesCS6B01G419100 chr3B 85.325 477 59 6 5771 6240 665468984 665469456 3.920000e-132 483.0
27 TraesCS6B01G419100 chr3B 78.298 811 121 33 962 1740 665464502 665465289 8.490000e-129 472.0
28 TraesCS6B01G419100 chr3B 94.512 164 9 0 2154 2317 527751979 527752142 3.350000e-63 254.0
29 TraesCS6B01G419100 chr3A 87.293 905 95 9 2984 3884 642367272 642368160 0.000000e+00 1016.0
30 TraesCS6B01G419100 chr3A 84.199 886 104 12 4365 5248 642368581 642369432 0.000000e+00 828.0
31 TraesCS6B01G419100 chr3A 86.529 631 71 7 3880 4503 642368234 642368857 0.000000e+00 682.0
32 TraesCS6B01G419100 chr3A 83.748 683 74 19 2316 2987 642366574 642367230 4.800000e-171 612.0
33 TraesCS6B01G419100 chr3A 84.277 477 64 6 5771 6240 642369766 642370238 8.560000e-124 455.0
34 TraesCS6B01G419100 chr3A 77.467 821 124 39 962 1740 642365138 642365939 1.110000e-117 435.0
35 TraesCS6B01G419100 chr5B 88.372 516 41 8 1000 1511 590471267 590470767 2.890000e-168 603.0
36 TraesCS6B01G419100 chr5B 86.692 263 27 3 1025 1283 103059779 103060037 1.190000e-72 285.0
37 TraesCS6B01G419100 chr7B 94.253 174 7 3 2150 2323 461739488 461739318 5.570000e-66 263.0
38 TraesCS6B01G419100 chr7D 94.479 163 9 0 2155 2317 500775618 500775456 1.200000e-62 252.0
39 TraesCS6B01G419100 chr5D 93.976 166 10 0 2151 2316 230416827 230416992 1.200000e-62 252.0
40 TraesCS6B01G419100 chr2D 93.939 165 10 0 2154 2318 387193857 387193693 4.330000e-62 250.0
41 TraesCS6B01G419100 chr2D 93.902 164 10 0 2155 2318 81004757 81004920 1.560000e-61 248.0
42 TraesCS6B01G419100 chr2D 84.091 88 12 2 343 428 369691746 369691833 4.650000e-12 84.2
43 TraesCS6B01G419100 chr2D 83.516 91 13 1 342 430 575186338 575186248 4.650000e-12 84.2
44 TraesCS6B01G419100 chr4D 92.899 169 12 0 2154 2322 433108818 433108650 5.610000e-61 246.0
45 TraesCS6B01G419100 chr4D 89.773 88 7 2 345 430 252173704 252173791 2.130000e-20 111.0
46 TraesCS6B01G419100 chr1B 92.000 175 13 1 2148 2321 649337128 649336954 2.020000e-60 244.0
47 TraesCS6B01G419100 chr1D 88.764 89 8 2 342 428 406664976 406665064 2.760000e-19 108.0
48 TraesCS6B01G419100 chr4A 84.466 103 12 3 329 428 407215172 407215273 1.660000e-16 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G419100 chr6B 690960628 690967861 7233 False 13359.000000 13359 100.000000 1 7234 1 chr6B.!!$F1 7233
1 TraesCS6B01G419100 chr6D 454485368 454492031 6663 False 2305.250000 7552 91.267000 1 7234 4 chr6D.!!$F1 7233
2 TraesCS6B01G419100 chr6A 600693107 600701374 8267 False 1506.166667 7395 93.467833 721 7234 6 chr6A.!!$F2 6513
3 TraesCS6B01G419100 chr3D 504054980 504059955 4975 False 682.000000 1083 83.862000 962 6240 6 chr3D.!!$F3 5278
4 TraesCS6B01G419100 chr3B 665464502 665469456 4954 False 684.400000 1050 84.068600 962 6240 5 chr3B.!!$F2 5278
5 TraesCS6B01G419100 chr3A 642365138 642370238 5100 False 671.333333 1016 83.918833 962 6240 6 chr3A.!!$F1 5278
6 TraesCS6B01G419100 chr5B 590470767 590471267 500 True 603.000000 603 88.372000 1000 1511 1 chr5B.!!$R1 511

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
689 735 0.609957 ACACCACGGTCGATAGGTCA 60.610 55.000 0.00 0.00 30.44 4.02 F
782 830 1.022735 GGAACTCTATCGCCGAGTCA 58.977 55.000 0.00 0.00 40.65 3.41 F
1688 2189 0.482446 TCTCCCAATGGCCAAAGTGT 59.518 50.000 10.96 0.00 0.00 3.55 F
1689 2190 0.604578 CTCCCAATGGCCAAAGTGTG 59.395 55.000 10.96 2.95 0.00 3.82 F
3114 3909 0.389948 GATCCGCACAAACGAGTCCT 60.390 55.000 0.00 0.00 34.06 3.85 F
3404 4199 1.351080 ATGCAGGCTATGGTGGCTCT 61.351 55.000 0.00 0.00 41.04 4.09 F
3649 4447 1.473258 TCTGCAAACTGCTGGTGTTT 58.527 45.000 5.80 0.00 45.31 2.83 F
4504 5464 3.054508 TGATACAAGTGATGCATGTCCCA 60.055 43.478 2.46 0.00 30.97 4.37 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1587 2080 0.106868 TTGCATCAGGATCTGGGCAG 60.107 55.000 12.24 0.00 40.77 4.85 R
2388 3118 0.393537 CACCACATCCCTGCTCCTTC 60.394 60.000 0.00 0.00 0.00 3.46 R
3083 3878 0.038251 TGCGGATCTGACACTGACAC 60.038 55.000 5.48 0.00 0.00 3.67 R
3534 4332 0.392706 TCTCGCCACTGTCATGTTGT 59.607 50.000 0.00 0.00 0.00 3.32 R
5096 6062 0.748005 ACGCTTGGGTGGATATGCAC 60.748 55.000 18.30 18.30 0.00 4.57 R
5128 6094 3.120321 AGTGTTTATGAAGCACCGTCA 57.880 42.857 2.99 0.00 33.96 4.35 R
5481 6491 4.051922 TGAGTTCTCGAAAGCTCTTGAAC 58.948 43.478 4.18 3.34 34.46 3.18 R
6453 7481 1.073199 CGTTCCTGGCCTTCTTGGT 59.927 57.895 3.32 0.00 38.35 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.373830 AGAGCAGAGCCTATCTTCTGTT 58.626 45.455 3.74 0.00 35.47 3.16
23 24 3.132646 AGAGCAGAGCCTATCTTCTGTTG 59.867 47.826 3.74 0.00 35.47 3.33
24 25 2.836981 AGCAGAGCCTATCTTCTGTTGT 59.163 45.455 3.74 0.00 35.47 3.32
108 109 3.745975 TGTAAGGATTGCTCGAGTTGTTG 59.254 43.478 15.13 0.00 0.00 3.33
110 111 1.160137 GGATTGCTCGAGTTGTTGCT 58.840 50.000 15.13 0.00 0.00 3.91
113 114 0.657312 TTGCTCGAGTTGTTGCTGTG 59.343 50.000 15.13 0.00 0.00 3.66
118 119 1.006086 CGAGTTGTTGCTGTGTGTCA 58.994 50.000 0.00 0.00 0.00 3.58
256 257 3.016736 GGAATTGGTCTGGTGTATGTGG 58.983 50.000 0.00 0.00 0.00 4.17
276 278 4.096984 GTGGGATTTGTCTATTTGCTGGAG 59.903 45.833 0.00 0.00 0.00 3.86
280 282 6.097412 GGGATTTGTCTATTTGCTGGAGATTT 59.903 38.462 0.00 0.00 0.00 2.17
283 285 8.814038 ATTTGTCTATTTGCTGGAGATTTACT 57.186 30.769 0.00 0.00 0.00 2.24
292 294 4.080356 TGCTGGAGATTTACTGGCAGTTAT 60.080 41.667 27.24 18.89 0.00 1.89
293 295 4.274459 GCTGGAGATTTACTGGCAGTTATG 59.726 45.833 27.24 8.53 0.00 1.90
294 296 5.431765 CTGGAGATTTACTGGCAGTTATGT 58.568 41.667 27.24 17.31 0.00 2.29
296 298 6.953101 TGGAGATTTACTGGCAGTTATGTTA 58.047 36.000 27.24 2.96 0.00 2.41
297 299 7.573710 TGGAGATTTACTGGCAGTTATGTTAT 58.426 34.615 27.24 6.87 0.00 1.89
299 301 8.560374 GGAGATTTACTGGCAGTTATGTTATTC 58.440 37.037 27.24 12.71 0.00 1.75
330 333 8.495160 TCAAATTATAGATTTGGGCATGGAAT 57.505 30.769 10.54 0.00 38.97 3.01
331 334 9.599056 TCAAATTATAGATTTGGGCATGGAATA 57.401 29.630 10.54 0.00 38.97 1.75
341 344 4.296912 TGGGCATGGAATAATGGTTGATT 58.703 39.130 0.00 0.00 0.00 2.57
342 345 5.462240 TGGGCATGGAATAATGGTTGATTA 58.538 37.500 0.00 0.00 0.00 1.75
343 346 5.539574 TGGGCATGGAATAATGGTTGATTAG 59.460 40.000 0.00 0.00 29.78 1.73
344 347 5.539955 GGGCATGGAATAATGGTTGATTAGT 59.460 40.000 0.00 0.00 29.78 2.24
345 348 6.719370 GGGCATGGAATAATGGTTGATTAGTA 59.281 38.462 0.00 0.00 29.78 1.82
346 349 7.309194 GGGCATGGAATAATGGTTGATTAGTAC 60.309 40.741 0.00 0.00 29.78 2.73
347 350 7.448469 GGCATGGAATAATGGTTGATTAGTACT 59.552 37.037 0.00 0.00 28.37 2.73
348 351 8.507249 GCATGGAATAATGGTTGATTAGTACTC 58.493 37.037 0.00 0.00 28.37 2.59
349 352 9.003658 CATGGAATAATGGTTGATTAGTACTCC 57.996 37.037 0.00 0.00 28.37 3.85
350 353 7.514721 TGGAATAATGGTTGATTAGTACTCCC 58.485 38.462 0.00 0.00 28.37 4.30
351 354 7.349859 TGGAATAATGGTTGATTAGTACTCCCT 59.650 37.037 0.00 0.00 28.37 4.20
352 355 8.218488 GGAATAATGGTTGATTAGTACTCCCTT 58.782 37.037 0.00 0.00 29.78 3.95
353 356 9.628500 GAATAATGGTTGATTAGTACTCCCTTT 57.372 33.333 0.00 0.00 29.78 3.11
354 357 8.980481 ATAATGGTTGATTAGTACTCCCTTTG 57.020 34.615 0.00 0.00 29.78 2.77
355 358 4.585879 TGGTTGATTAGTACTCCCTTTGC 58.414 43.478 0.00 0.00 0.00 3.68
356 359 4.042311 TGGTTGATTAGTACTCCCTTTGCA 59.958 41.667 0.00 0.00 0.00 4.08
357 360 5.007682 GGTTGATTAGTACTCCCTTTGCAA 58.992 41.667 0.00 0.00 0.00 4.08
358 361 5.475564 GGTTGATTAGTACTCCCTTTGCAAA 59.524 40.000 12.14 12.14 0.00 3.68
359 362 6.349363 GGTTGATTAGTACTCCCTTTGCAAAG 60.349 42.308 28.69 28.69 35.79 2.77
360 363 6.121776 TGATTAGTACTCCCTTTGCAAAGA 57.878 37.500 35.25 18.82 38.28 2.52
361 364 6.539173 TGATTAGTACTCCCTTTGCAAAGAA 58.461 36.000 35.25 22.77 38.28 2.52
362 365 7.001674 TGATTAGTACTCCCTTTGCAAAGAAA 58.998 34.615 35.25 22.46 38.28 2.52
363 366 6.628919 TTAGTACTCCCTTTGCAAAGAAAC 57.371 37.500 35.25 23.72 38.28 2.78
364 367 4.532834 AGTACTCCCTTTGCAAAGAAACA 58.467 39.130 35.25 17.01 38.28 2.83
365 368 5.140454 AGTACTCCCTTTGCAAAGAAACAT 58.860 37.500 35.25 20.07 38.28 2.71
366 369 6.303839 AGTACTCCCTTTGCAAAGAAACATA 58.696 36.000 35.25 19.19 38.28 2.29
367 370 6.775629 AGTACTCCCTTTGCAAAGAAACATAA 59.224 34.615 35.25 14.57 38.28 1.90
368 371 6.478512 ACTCCCTTTGCAAAGAAACATAAA 57.521 33.333 35.25 13.05 38.28 1.40
369 372 6.883744 ACTCCCTTTGCAAAGAAACATAAAA 58.116 32.000 35.25 11.75 38.28 1.52
370 373 6.986231 ACTCCCTTTGCAAAGAAACATAAAAG 59.014 34.615 35.25 20.06 38.28 2.27
371 374 6.883744 TCCCTTTGCAAAGAAACATAAAAGT 58.116 32.000 35.25 0.00 38.28 2.66
372 375 6.760770 TCCCTTTGCAAAGAAACATAAAAGTG 59.239 34.615 35.25 16.21 38.28 3.16
373 376 6.538381 CCCTTTGCAAAGAAACATAAAAGTGT 59.462 34.615 35.25 0.00 38.28 3.55
374 377 7.065683 CCCTTTGCAAAGAAACATAAAAGTGTT 59.934 33.333 35.25 0.00 38.28 3.32
439 442 6.938698 TGGAGGGAGTACAAAGTTAATGTA 57.061 37.500 0.00 0.00 32.27 2.29
443 446 5.191124 AGGGAGTACAAAGTTAATGTAGGGG 59.809 44.000 0.00 0.00 34.14 4.79
444 447 5.190330 GGGAGTACAAAGTTAATGTAGGGGA 59.810 44.000 0.00 0.00 34.14 4.81
446 449 7.344134 GGAGTACAAAGTTAATGTAGGGGATT 58.656 38.462 0.00 0.00 34.14 3.01
447 450 7.498239 GGAGTACAAAGTTAATGTAGGGGATTC 59.502 40.741 0.00 0.00 34.14 2.52
450 453 6.548321 ACAAAGTTAATGTAGGGGATTCACA 58.452 36.000 0.00 0.00 0.00 3.58
451 454 6.433093 ACAAAGTTAATGTAGGGGATTCACAC 59.567 38.462 0.00 0.00 0.00 3.82
452 455 5.772393 AGTTAATGTAGGGGATTCACACA 57.228 39.130 0.00 0.00 0.00 3.72
454 457 6.122277 AGTTAATGTAGGGGATTCACACATG 58.878 40.000 0.00 0.00 30.55 3.21
455 458 4.591321 AATGTAGGGGATTCACACATGT 57.409 40.909 0.00 0.00 30.55 3.21
456 459 4.591321 ATGTAGGGGATTCACACATGTT 57.409 40.909 0.00 0.00 0.00 2.71
457 460 3.684908 TGTAGGGGATTCACACATGTTG 58.315 45.455 0.00 0.00 0.00 3.33
461 464 2.428171 GGGGATTCACACATGTTGATGG 59.572 50.000 0.00 0.00 33.39 3.51
462 465 2.428171 GGGATTCACACATGTTGATGGG 59.572 50.000 0.00 0.00 39.14 4.00
469 472 3.015934 CACATGTTGATGGGTGTGTTG 57.984 47.619 0.00 0.00 37.70 3.33
471 474 3.567585 CACATGTTGATGGGTGTGTTGTA 59.432 43.478 0.00 0.00 37.70 2.41
472 475 4.037327 CACATGTTGATGGGTGTGTTGTAA 59.963 41.667 0.00 0.00 37.70 2.41
474 477 5.048083 ACATGTTGATGGGTGTGTTGTAATC 60.048 40.000 0.00 0.00 33.39 1.75
475 478 3.823873 TGTTGATGGGTGTGTTGTAATCC 59.176 43.478 0.00 0.00 0.00 3.01
476 479 4.079253 GTTGATGGGTGTGTTGTAATCCT 58.921 43.478 0.00 0.00 0.00 3.24
478 481 4.735369 TGATGGGTGTGTTGTAATCCTTT 58.265 39.130 0.00 0.00 0.00 3.11
479 482 5.144100 TGATGGGTGTGTTGTAATCCTTTT 58.856 37.500 0.00 0.00 0.00 2.27
480 483 5.242838 TGATGGGTGTGTTGTAATCCTTTTC 59.757 40.000 0.00 0.00 0.00 2.29
482 485 4.582656 TGGGTGTGTTGTAATCCTTTTCAG 59.417 41.667 0.00 0.00 0.00 3.02
483 486 4.546570 GGTGTGTTGTAATCCTTTTCAGC 58.453 43.478 0.00 0.00 0.00 4.26
484 487 4.278419 GGTGTGTTGTAATCCTTTTCAGCT 59.722 41.667 0.00 0.00 0.00 4.24
485 488 5.215160 GTGTGTTGTAATCCTTTTCAGCTG 58.785 41.667 7.63 7.63 0.00 4.24
486 489 4.229876 GTGTTGTAATCCTTTTCAGCTGC 58.770 43.478 9.47 0.00 0.00 5.25
487 490 3.888323 TGTTGTAATCCTTTTCAGCTGCA 59.112 39.130 9.47 0.00 0.00 4.41
488 491 4.229876 GTTGTAATCCTTTTCAGCTGCAC 58.770 43.478 9.47 0.00 0.00 4.57
489 492 3.754965 TGTAATCCTTTTCAGCTGCACT 58.245 40.909 9.47 0.00 0.00 4.40
490 493 4.144297 TGTAATCCTTTTCAGCTGCACTT 58.856 39.130 9.47 0.00 0.00 3.16
502 505 4.393990 TCAGCTGCACTTAGTCAAATCATG 59.606 41.667 9.47 0.00 0.00 3.07
606 620 4.682563 AGAGAGAAAACATCAGAGGGAGA 58.317 43.478 0.00 0.00 0.00 3.71
607 621 4.711355 AGAGAGAAAACATCAGAGGGAGAG 59.289 45.833 0.00 0.00 0.00 3.20
608 622 4.682563 AGAGAAAACATCAGAGGGAGAGA 58.317 43.478 0.00 0.00 0.00 3.10
609 623 5.090139 AGAGAAAACATCAGAGGGAGAGAA 58.910 41.667 0.00 0.00 0.00 2.87
610 624 5.545723 AGAGAAAACATCAGAGGGAGAGAAA 59.454 40.000 0.00 0.00 0.00 2.52
612 626 6.000840 AGAAAACATCAGAGGGAGAGAAAAC 58.999 40.000 0.00 0.00 0.00 2.43
613 627 4.982241 AACATCAGAGGGAGAGAAAACA 57.018 40.909 0.00 0.00 0.00 2.83
614 628 5.511386 AACATCAGAGGGAGAGAAAACAT 57.489 39.130 0.00 0.00 0.00 2.71
616 630 5.885465 ACATCAGAGGGAGAGAAAACATTT 58.115 37.500 0.00 0.00 0.00 2.32
617 631 7.020827 ACATCAGAGGGAGAGAAAACATTTA 57.979 36.000 0.00 0.00 0.00 1.40
618 632 7.108847 ACATCAGAGGGAGAGAAAACATTTAG 58.891 38.462 0.00 0.00 0.00 1.85
619 633 5.491982 TCAGAGGGAGAGAAAACATTTAGC 58.508 41.667 0.00 0.00 0.00 3.09
620 634 5.013079 TCAGAGGGAGAGAAAACATTTAGCA 59.987 40.000 0.00 0.00 0.00 3.49
621 635 5.707298 CAGAGGGAGAGAAAACATTTAGCAA 59.293 40.000 0.00 0.00 0.00 3.91
622 636 6.207417 CAGAGGGAGAGAAAACATTTAGCAAA 59.793 38.462 0.00 0.00 0.00 3.68
624 638 7.452813 AGAGGGAGAGAAAACATTTAGCAAATT 59.547 33.333 0.00 0.00 0.00 1.82
677 723 2.880963 AAATGGGAAAACACACCACG 57.119 45.000 0.00 0.00 37.05 4.94
680 726 0.748729 TGGGAAAACACACCACGGTC 60.749 55.000 0.00 0.00 0.00 4.79
687 733 0.896940 ACACACCACGGTCGATAGGT 60.897 55.000 0.00 0.00 33.91 3.08
689 735 0.609957 ACACCACGGTCGATAGGTCA 60.610 55.000 0.00 0.00 30.44 4.02
716 764 4.578105 GCCTCTTGCAGATAAAGCATAACT 59.422 41.667 0.00 0.00 42.33 2.24
724 772 5.049129 GCAGATAAAGCATAACTGTGATCCC 60.049 44.000 8.08 0.00 0.00 3.85
740 788 2.359967 CCCAGGGGTCGTCTTCTCC 61.360 68.421 0.00 0.00 0.00 3.71
757 805 1.472480 CTCCGGCGAATCAACCATTTT 59.528 47.619 9.30 0.00 0.00 1.82
761 809 4.158764 TCCGGCGAATCAACCATTTTAATT 59.841 37.500 9.30 0.00 0.00 1.40
762 810 4.267452 CCGGCGAATCAACCATTTTAATTG 59.733 41.667 9.30 0.00 0.00 2.32
782 830 1.022735 GGAACTCTATCGCCGAGTCA 58.977 55.000 0.00 0.00 40.65 3.41
848 897 5.414454 TGTGTACAGCAATTATGAAGGGAAC 59.586 40.000 0.00 0.00 0.00 3.62
906 955 6.019479 TGCAAAACGGTTAATAAAACTTGCAG 60.019 34.615 16.78 0.00 41.04 4.41
922 971 6.254281 ACTTGCAGAAAACCATACACATAC 57.746 37.500 0.00 0.00 0.00 2.39
923 972 6.003950 ACTTGCAGAAAACCATACACATACT 58.996 36.000 0.00 0.00 0.00 2.12
925 974 7.334421 ACTTGCAGAAAACCATACACATACTAG 59.666 37.037 0.00 0.00 0.00 2.57
927 976 7.842982 TGCAGAAAACCATACACATACTAGTA 58.157 34.615 4.77 4.77 0.00 1.82
928 977 7.979537 TGCAGAAAACCATACACATACTAGTAG 59.020 37.037 8.85 3.62 0.00 2.57
929 978 8.195436 GCAGAAAACCATACACATACTAGTAGA 58.805 37.037 8.85 0.00 0.00 2.59
954 1018 5.152623 TCTGATGTACCAGGACAAAGAAG 57.847 43.478 0.00 0.00 34.99 2.85
1010 1101 4.161295 TCTCTCAATGCCGCCCCG 62.161 66.667 0.00 0.00 0.00 5.73
1511 1661 5.010012 GTGGAGTGGTTGAAGTTTCATTCAT 59.990 40.000 0.00 0.00 38.90 2.57
1512 1662 5.241506 TGGAGTGGTTGAAGTTTCATTCATC 59.758 40.000 0.00 0.00 38.90 2.92
1557 2049 3.181484 ACATACCGTCGCTGCATTTACTA 60.181 43.478 0.00 0.00 0.00 1.82
1587 2080 9.846248 AGTGATGTTGCTAGTTGAATTAAATTC 57.154 29.630 0.00 0.00 39.70 2.17
1598 2092 6.097412 AGTTGAATTAAATTCTGCCCAGATCC 59.903 38.462 0.00 0.00 39.96 3.36
1611 2106 2.356432 CCCAGATCCTGATGCAAACTCA 60.356 50.000 0.00 0.00 32.44 3.41
1615 2110 1.522668 TCCTGATGCAAACTCAACCG 58.477 50.000 0.00 0.00 0.00 4.44
1634 2129 8.972458 TCAACCGGAAATCATAATCTTGATTA 57.028 30.769 9.46 5.66 43.73 1.75
1675 2176 4.533707 ACTCATTCAGACTTGATTCTCCCA 59.466 41.667 0.00 0.00 32.27 4.37
1682 2183 1.358787 ACTTGATTCTCCCAATGGCCA 59.641 47.619 8.56 8.56 0.00 5.36
1688 2189 0.482446 TCTCCCAATGGCCAAAGTGT 59.518 50.000 10.96 0.00 0.00 3.55
1689 2190 0.604578 CTCCCAATGGCCAAAGTGTG 59.395 55.000 10.96 2.95 0.00 3.82
1725 2226 4.640771 AAAAGTTGGAGATGACAGGCTA 57.359 40.909 0.00 0.00 0.00 3.93
1744 2253 4.034510 GGCTACACTGTACAGCAATTGATC 59.965 45.833 22.90 7.82 37.02 2.92
1753 2262 4.458256 ACAGCAATTGATCCCATGGATA 57.542 40.909 15.22 0.30 43.27 2.59
1756 2265 4.458295 CAGCAATTGATCCCATGGATAGTC 59.542 45.833 15.22 6.02 43.27 2.59
1759 2268 4.923516 ATTGATCCCATGGATAGTCCTG 57.076 45.455 15.22 0.00 43.27 3.86
1760 2269 1.980765 TGATCCCATGGATAGTCCTGC 59.019 52.381 15.22 0.00 43.27 4.85
1764 2273 2.972713 TCCCATGGATAGTCCTGCTTAC 59.027 50.000 15.22 0.00 37.46 2.34
1768 2277 5.071788 CCCATGGATAGTCCTGCTTACTTAA 59.928 44.000 15.22 0.00 37.46 1.85
1773 2282 9.700831 ATGGATAGTCCTGCTTACTTAATTTTT 57.299 29.630 0.00 0.00 37.46 1.94
1792 2321 0.810426 TTTGTGCGCGGTACACTGAA 60.810 50.000 8.83 4.63 38.86 3.02
1837 2491 5.220662 GCGACAATAGCTGTGAACATAACAT 60.221 40.000 0.00 0.00 38.84 2.71
1839 2493 6.441093 ACAATAGCTGTGAACATAACATGG 57.559 37.500 0.00 0.00 36.69 3.66
1841 2495 3.719268 AGCTGTGAACATAACATGGGA 57.281 42.857 0.00 0.00 33.60 4.37
1843 2497 4.012374 AGCTGTGAACATAACATGGGAAG 58.988 43.478 0.00 0.00 33.60 3.46
1846 2500 4.331968 TGTGAACATAACATGGGAAGACC 58.668 43.478 0.00 0.00 40.81 3.85
1861 2515 6.548321 TGGGAAGACCTTGTATATTGTTTGT 58.452 36.000 0.00 0.00 41.11 2.83
1863 2517 7.608761 TGGGAAGACCTTGTATATTGTTTGTAC 59.391 37.037 0.00 0.00 41.11 2.90
1865 2519 8.880750 GGAAGACCTTGTATATTGTTTGTACTC 58.119 37.037 0.00 0.00 0.00 2.59
1922 2577 4.592942 TGGCAGCATTCTAAATTCTGACT 58.407 39.130 6.70 0.00 34.07 3.41
1934 2589 5.578005 AAATTCTGACTGGCATCTCATTG 57.422 39.130 0.00 0.00 0.00 2.82
1935 2590 2.034104 TCTGACTGGCATCTCATTGC 57.966 50.000 0.00 0.00 42.01 3.56
1944 2599 4.025360 TGGCATCTCATTGCTGGTATTTT 58.975 39.130 0.00 0.00 42.38 1.82
1945 2600 5.199723 TGGCATCTCATTGCTGGTATTTTA 58.800 37.500 0.00 0.00 42.38 1.52
1946 2601 5.300034 TGGCATCTCATTGCTGGTATTTTAG 59.700 40.000 0.00 0.00 42.38 1.85
1947 2602 5.300286 GGCATCTCATTGCTGGTATTTTAGT 59.700 40.000 0.00 0.00 42.38 2.24
1948 2603 6.433766 GCATCTCATTGCTGGTATTTTAGTC 58.566 40.000 0.00 0.00 39.57 2.59
1949 2604 6.038603 GCATCTCATTGCTGGTATTTTAGTCA 59.961 38.462 0.00 0.00 39.57 3.41
1952 2607 8.579850 TCTCATTGCTGGTATTTTAGTCAAAT 57.420 30.769 0.00 0.00 38.69 2.32
1995 2686 5.078411 TCTGTGGAGAACTTATCTGCTTC 57.922 43.478 0.00 0.00 46.03 3.86
2001 2692 5.127845 TGGAGAACTTATCTGCTTCTACCTG 59.872 44.000 0.00 0.00 46.03 4.00
2047 2745 6.356556 TGCTATAGTTCACCAATGTTGCTAT 58.643 36.000 0.84 0.00 0.00 2.97
2095 2793 7.977853 GGCTCATGTTTTCTTGTGATATGAAAT 59.022 33.333 0.00 0.00 33.88 2.17
2154 2880 4.202441 CAAGTGCCAATGGTATTCTAGCT 58.798 43.478 0.00 0.00 0.00 3.32
2155 2881 5.368145 CAAGTGCCAATGGTATTCTAGCTA 58.632 41.667 0.00 0.00 0.00 3.32
2156 2882 4.962155 AGTGCCAATGGTATTCTAGCTAC 58.038 43.478 0.00 0.00 0.00 3.58
2157 2883 4.656112 AGTGCCAATGGTATTCTAGCTACT 59.344 41.667 0.00 0.00 0.00 2.57
2158 2884 4.991687 GTGCCAATGGTATTCTAGCTACTC 59.008 45.833 0.00 0.00 0.00 2.59
2159 2885 4.040461 TGCCAATGGTATTCTAGCTACTCC 59.960 45.833 0.00 0.00 0.00 3.85
2160 2886 4.040461 GCCAATGGTATTCTAGCTACTCCA 59.960 45.833 0.00 0.00 0.00 3.86
2161 2887 5.280215 GCCAATGGTATTCTAGCTACTCCAT 60.280 44.000 0.00 0.00 36.01 3.41
2162 2888 6.402222 CCAATGGTATTCTAGCTACTCCATC 58.598 44.000 0.00 0.00 33.81 3.51
2163 2889 6.402222 CAATGGTATTCTAGCTACTCCATCC 58.598 44.000 0.00 0.00 33.81 3.51
2164 2890 4.079970 TGGTATTCTAGCTACTCCATCCG 58.920 47.826 0.00 0.00 0.00 4.18
2165 2891 4.080687 GGTATTCTAGCTACTCCATCCGT 58.919 47.826 0.00 0.00 0.00 4.69
2166 2892 4.523558 GGTATTCTAGCTACTCCATCCGTT 59.476 45.833 0.00 0.00 0.00 4.44
2167 2893 5.010820 GGTATTCTAGCTACTCCATCCGTTT 59.989 44.000 0.00 0.00 0.00 3.60
2168 2894 4.650754 TTCTAGCTACTCCATCCGTTTC 57.349 45.455 0.00 0.00 0.00 2.78
2169 2895 3.899726 TCTAGCTACTCCATCCGTTTCT 58.100 45.455 0.00 0.00 0.00 2.52
2170 2896 5.045012 TCTAGCTACTCCATCCGTTTCTA 57.955 43.478 0.00 0.00 0.00 2.10
2171 2897 5.443283 TCTAGCTACTCCATCCGTTTCTAA 58.557 41.667 0.00 0.00 0.00 2.10
2172 2898 5.889853 TCTAGCTACTCCATCCGTTTCTAAA 59.110 40.000 0.00 0.00 0.00 1.85
2173 2899 5.615925 AGCTACTCCATCCGTTTCTAAAT 57.384 39.130 0.00 0.00 0.00 1.40
2174 2900 6.726490 AGCTACTCCATCCGTTTCTAAATA 57.274 37.500 0.00 0.00 0.00 1.40
2175 2901 7.304497 AGCTACTCCATCCGTTTCTAAATAT 57.696 36.000 0.00 0.00 0.00 1.28
2176 2902 8.418597 AGCTACTCCATCCGTTTCTAAATATA 57.581 34.615 0.00 0.00 0.00 0.86
2177 2903 8.867097 AGCTACTCCATCCGTTTCTAAATATAA 58.133 33.333 0.00 0.00 0.00 0.98
2178 2904 9.141400 GCTACTCCATCCGTTTCTAAATATAAG 57.859 37.037 0.00 0.00 0.00 1.73
2181 2907 8.925338 ACTCCATCCGTTTCTAAATATAAGTCT 58.075 33.333 0.00 0.00 0.00 3.24
2182 2908 9.765795 CTCCATCCGTTTCTAAATATAAGTCTT 57.234 33.333 0.00 0.00 0.00 3.01
2200 2926 6.742559 AGTCTTTTTAGAGGTTCCACTACA 57.257 37.500 0.00 0.00 0.00 2.74
2201 2927 6.760291 AGTCTTTTTAGAGGTTCCACTACAG 58.240 40.000 0.00 0.00 0.00 2.74
2202 2928 6.553852 AGTCTTTTTAGAGGTTCCACTACAGA 59.446 38.462 0.00 0.00 0.00 3.41
2203 2929 6.645827 GTCTTTTTAGAGGTTCCACTACAGAC 59.354 42.308 10.58 10.58 0.00 3.51
2204 2930 6.553852 TCTTTTTAGAGGTTCCACTACAGACT 59.446 38.462 0.00 0.00 0.00 3.24
2205 2931 7.727186 TCTTTTTAGAGGTTCCACTACAGACTA 59.273 37.037 0.00 0.00 0.00 2.59
2206 2932 6.830873 TTTAGAGGTTCCACTACAGACTAC 57.169 41.667 0.00 0.00 0.00 2.73
2207 2933 4.383931 AGAGGTTCCACTACAGACTACA 57.616 45.455 0.00 0.00 0.00 2.74
2208 2934 4.936802 AGAGGTTCCACTACAGACTACAT 58.063 43.478 0.00 0.00 0.00 2.29
2209 2935 6.075949 AGAGGTTCCACTACAGACTACATA 57.924 41.667 0.00 0.00 0.00 2.29
2210 2936 5.887035 AGAGGTTCCACTACAGACTACATAC 59.113 44.000 0.00 0.00 0.00 2.39
2211 2937 4.639310 AGGTTCCACTACAGACTACATACG 59.361 45.833 0.00 0.00 0.00 3.06
2212 2938 4.201990 GGTTCCACTACAGACTACATACGG 60.202 50.000 0.00 0.00 0.00 4.02
2213 2939 4.492494 TCCACTACAGACTACATACGGA 57.508 45.455 0.00 0.00 0.00 4.69
2214 2940 4.449131 TCCACTACAGACTACATACGGAG 58.551 47.826 0.00 0.00 0.00 4.63
2215 2941 3.003482 CCACTACAGACTACATACGGAGC 59.997 52.174 0.00 0.00 0.00 4.70
2216 2942 3.626217 CACTACAGACTACATACGGAGCA 59.374 47.826 0.00 0.00 0.00 4.26
2217 2943 4.095932 CACTACAGACTACATACGGAGCAA 59.904 45.833 0.00 0.00 0.00 3.91
2218 2944 4.703575 ACTACAGACTACATACGGAGCAAA 59.296 41.667 0.00 0.00 0.00 3.68
2219 2945 4.530710 ACAGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
2220 2946 5.086104 ACAGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
2221 2947 4.870426 ACAGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
2222 2948 5.109210 CAGACTACATACGGAGCAAAATGA 58.891 41.667 0.00 0.00 0.00 2.57
2223 2949 5.233050 CAGACTACATACGGAGCAAAATGAG 59.767 44.000 0.00 0.00 0.00 2.90
2224 2950 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
2225 2951 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
2226 2952 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
2227 2953 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
2228 2954 4.154195 ACATACGGAGCAAAATGAGTGAAC 59.846 41.667 0.00 0.00 0.00 3.18
2229 2955 1.880027 ACGGAGCAAAATGAGTGAACC 59.120 47.619 0.00 0.00 0.00 3.62
2230 2956 1.200020 CGGAGCAAAATGAGTGAACCC 59.800 52.381 0.00 0.00 0.00 4.11
2231 2957 2.238521 GGAGCAAAATGAGTGAACCCA 58.761 47.619 0.00 0.00 0.00 4.51
2232 2958 2.029918 GGAGCAAAATGAGTGAACCCAC 60.030 50.000 0.00 0.00 43.50 4.61
2233 2959 2.622942 GAGCAAAATGAGTGAACCCACA 59.377 45.455 0.00 0.00 45.54 4.17
2234 2960 2.362077 AGCAAAATGAGTGAACCCACAC 59.638 45.455 0.00 0.00 45.54 3.82
2245 2971 5.794894 AGTGAACCCACACTCTAAAGTATG 58.205 41.667 0.00 0.00 46.36 2.39
2246 2972 5.307196 AGTGAACCCACACTCTAAAGTATGT 59.693 40.000 0.00 0.00 46.36 2.29
2247 2973 5.638234 GTGAACCCACACTCTAAAGTATGTC 59.362 44.000 0.00 0.00 42.72 3.06
2248 2974 5.542635 TGAACCCACACTCTAAAGTATGTCT 59.457 40.000 0.00 0.00 33.25 3.41
2249 2975 6.722590 TGAACCCACACTCTAAAGTATGTCTA 59.277 38.462 0.00 0.00 33.25 2.59
2250 2976 7.399191 TGAACCCACACTCTAAAGTATGTCTAT 59.601 37.037 0.00 0.00 33.25 1.98
2251 2977 8.834004 AACCCACACTCTAAAGTATGTCTATA 57.166 34.615 0.00 0.00 33.25 1.31
2252 2978 9.435570 AACCCACACTCTAAAGTATGTCTATAT 57.564 33.333 0.00 0.00 33.25 0.86
2277 3003 6.776744 ACATCCGTATGTAGTCTATAGTGGA 58.223 40.000 0.00 0.00 44.66 4.02
2278 3004 7.229308 ACATCCGTATGTAGTCTATAGTGGAA 58.771 38.462 0.00 0.00 44.66 3.53
2279 3005 7.889073 ACATCCGTATGTAGTCTATAGTGGAAT 59.111 37.037 0.00 0.00 44.66 3.01
2280 3006 7.918536 TCCGTATGTAGTCTATAGTGGAATC 57.081 40.000 0.00 0.00 0.00 2.52
2281 3007 7.687388 TCCGTATGTAGTCTATAGTGGAATCT 58.313 38.462 0.00 0.00 0.00 2.40
2282 3008 7.823310 TCCGTATGTAGTCTATAGTGGAATCTC 59.177 40.741 0.00 0.00 0.00 2.75
2283 3009 7.825270 CCGTATGTAGTCTATAGTGGAATCTCT 59.175 40.741 0.00 0.00 0.00 3.10
2284 3010 9.872721 CGTATGTAGTCTATAGTGGAATCTCTA 57.127 37.037 0.00 0.00 0.00 2.43
2310 3036 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
2311 3037 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
2312 3038 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
2313 3039 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
2406 3136 1.566298 GGAAGGAGCAGGGATGTGGT 61.566 60.000 0.00 0.00 0.00 4.16
2424 3154 3.815401 GTGGTGGATGCCATGTTAGATAC 59.185 47.826 0.00 0.00 41.08 2.24
2869 3610 2.767424 TATGGTCCCACCGTCCCCAA 62.767 60.000 0.00 0.00 42.58 4.12
2894 3635 1.619654 CAGGGTGGCAAGAACAATGA 58.380 50.000 0.00 0.00 0.00 2.57
2903 3644 3.236816 GCAAGAACAATGACAATGACCG 58.763 45.455 0.00 0.00 0.00 4.79
3034 3823 0.950116 GCATGAACCATCTAGGCTGC 59.050 55.000 0.00 0.00 43.14 5.25
3075 3870 3.372025 GCCCTCAAGAAGATACCATTGGT 60.372 47.826 13.94 13.94 40.16 3.67
3076 3871 4.202441 CCCTCAAGAAGATACCATTGGTG 58.798 47.826 18.83 0.00 36.19 4.17
3077 3872 3.629398 CCTCAAGAAGATACCATTGGTGC 59.371 47.826 18.83 10.17 36.19 5.01
3078 3873 3.620488 TCAAGAAGATACCATTGGTGCC 58.380 45.455 18.83 9.57 36.19 5.01
3079 3874 3.010027 TCAAGAAGATACCATTGGTGCCA 59.990 43.478 18.83 0.00 36.19 4.92
3080 3875 3.956199 CAAGAAGATACCATTGGTGCCAT 59.044 43.478 18.83 3.84 36.19 4.40
3081 3876 4.255510 AGAAGATACCATTGGTGCCATT 57.744 40.909 18.83 7.72 36.19 3.16
3082 3877 3.956199 AGAAGATACCATTGGTGCCATTG 59.044 43.478 18.83 6.22 36.19 2.82
3083 3878 2.669781 AGATACCATTGGTGCCATTGG 58.330 47.619 23.23 23.23 46.82 3.16
3114 3909 0.389948 GATCCGCACAAACGAGTCCT 60.390 55.000 0.00 0.00 34.06 3.85
3173 3968 1.367599 GCTTCAGCTAGCTGCAGTGG 61.368 60.000 34.62 23.52 45.94 4.00
3305 4100 3.009723 ACAAGTACAGAAATCCATGCCG 58.990 45.455 0.00 0.00 0.00 5.69
3363 4158 7.669427 ACACCAGCATTCATTTATCAAAGAAA 58.331 30.769 0.00 0.00 0.00 2.52
3383 4178 6.719301 AGAAACTCAGTCATGAAGGATTGAT 58.281 36.000 0.00 0.00 33.76 2.57
3404 4199 1.351080 ATGCAGGCTATGGTGGCTCT 61.351 55.000 0.00 0.00 41.04 4.09
3414 4209 4.321899 GCTATGGTGGCTCTAGATTCTGAG 60.322 50.000 0.00 3.04 0.00 3.35
3418 4213 3.569701 GGTGGCTCTAGATTCTGAGAGAG 59.430 52.174 17.32 12.94 41.55 3.20
3440 4238 5.424121 GCTGATGCTTTACGGACAAATAT 57.576 39.130 0.00 0.00 36.03 1.28
3472 4270 5.111293 CAAATCACTTGCCTGAGTTTGTTT 58.889 37.500 0.00 0.00 0.00 2.83
3490 4288 2.813754 GTTTCTGCAGATGTTACAGGCA 59.186 45.455 19.04 8.42 32.19 4.75
3534 4332 6.572519 CAGAAAAACTCAAAGGAATTCACCA 58.427 36.000 7.93 0.00 0.00 4.17
3568 4366 2.404215 GCGAGACAGCAGTTCAAGTTA 58.596 47.619 0.00 0.00 37.05 2.24
3576 4374 5.503927 ACAGCAGTTCAAGTTATGGATGAT 58.496 37.500 0.00 0.00 0.00 2.45
3649 4447 1.473258 TCTGCAAACTGCTGGTGTTT 58.527 45.000 5.80 0.00 45.31 2.83
3821 4619 3.869832 CCAGCACTACTTGATGATGTCAG 59.130 47.826 0.00 0.00 45.06 3.51
3916 4873 6.763355 TCTAGTCAGGATAAAGATGCCAATC 58.237 40.000 0.00 0.00 0.00 2.67
3919 4876 4.024556 GTCAGGATAAAGATGCCAATCGTG 60.025 45.833 0.00 0.00 37.92 4.35
4196 5156 6.372659 CCAAAGCTACATGAACAATCTACTGT 59.627 38.462 0.00 0.00 0.00 3.55
4220 5180 4.792521 AACAACAAACAGCTACCAACAA 57.207 36.364 0.00 0.00 0.00 2.83
4302 5262 6.402222 AGCGGATAATCTTTCTCATATGGAC 58.598 40.000 2.13 0.00 0.00 4.02
4316 5276 5.198207 TCATATGGACGAAGAACCTAGTCA 58.802 41.667 2.13 0.00 35.49 3.41
4338 5298 3.774216 AGCAGAGGAATAAGCAGAGAACT 59.226 43.478 0.00 0.00 0.00 3.01
4391 5351 7.285401 GGATCAGTTGAATGGGTGTAATACATT 59.715 37.037 0.00 0.00 37.52 2.71
4503 5463 3.544684 TGATACAAGTGATGCATGTCCC 58.455 45.455 2.46 0.00 30.97 4.46
4504 5464 3.054508 TGATACAAGTGATGCATGTCCCA 60.055 43.478 2.46 0.00 30.97 4.37
4537 5497 5.064707 CAGTTGAATGGGTGTAATACTTCCG 59.935 44.000 0.00 0.00 0.00 4.30
4839 5805 3.181513 CGCAACATTCATCTCAGAACAGG 60.182 47.826 0.00 0.00 0.00 4.00
5012 5978 6.962678 CACCACAAAGCAAAATTTCAAGAAAG 59.037 34.615 1.48 0.00 33.32 2.62
5128 6094 4.933400 CACCCAAGCGTTAGTAAGTGTTAT 59.067 41.667 0.00 0.00 0.00 1.89
5173 6139 8.940397 TTCTTTTCCTGATTCTATTCTTTGGT 57.060 30.769 0.00 0.00 0.00 3.67
5481 6491 7.917505 GCCTCTGTATTCATGGTTAATTTCAAG 59.082 37.037 0.00 0.00 0.00 3.02
5494 6506 7.920682 TGGTTAATTTCAAGTTCAAGAGCTTTC 59.079 33.333 0.00 0.00 29.11 2.62
5675 6687 4.572985 TGCCTGCATTAACATAATCTGC 57.427 40.909 0.00 0.00 0.00 4.26
5761 6773 8.368668 AGTACTAATGTTTCTTAGCACAGAGTT 58.631 33.333 0.00 0.00 32.93 3.01
5794 6806 8.925700 GGATGTTTTCCAGTTATTGTGAAATTC 58.074 33.333 0.00 0.00 44.74 2.17
5827 6839 9.953697 TTTTGAAGTGTACAATTTAATAGCGTT 57.046 25.926 13.07 0.00 0.00 4.84
5836 6848 9.296951 GTACAATTTAATAGCGTTTGTTTTTGC 57.703 29.630 0.00 0.00 33.03 3.68
6046 7065 2.370281 ATGTACTCGTGTCCTTGCTG 57.630 50.000 0.00 0.00 0.00 4.41
6118 7137 0.037590 TTCACCCCAAAGGACGATGG 59.962 55.000 0.00 0.00 39.89 3.51
6144 7163 9.466497 GGCTAATTCCATGGATTCAGATATTAA 57.534 33.333 17.06 0.00 0.00 1.40
6227 7246 7.989741 TGGAGGAATATGAAGAAGAAATCAGAC 59.010 37.037 0.00 0.00 0.00 3.51
6243 7270 6.723298 AATCAGACTCCTAGTATTGACTGG 57.277 41.667 0.00 0.00 36.28 4.00
6244 7271 3.954904 TCAGACTCCTAGTATTGACTGGC 59.045 47.826 0.00 0.00 36.28 4.85
6245 7272 3.068873 CAGACTCCTAGTATTGACTGGCC 59.931 52.174 0.00 0.00 36.28 5.36
6246 7273 3.031736 GACTCCTAGTATTGACTGGCCA 58.968 50.000 4.71 4.71 36.28 5.36
6247 7274 3.643792 GACTCCTAGTATTGACTGGCCAT 59.356 47.826 5.51 0.00 36.28 4.40
6248 7275 3.643792 ACTCCTAGTATTGACTGGCCATC 59.356 47.826 5.51 7.08 36.28 3.51
6249 7276 3.900601 CTCCTAGTATTGACTGGCCATCT 59.099 47.826 5.51 0.00 36.28 2.90
6250 7277 3.643320 TCCTAGTATTGACTGGCCATCTG 59.357 47.826 5.51 0.00 36.28 2.90
6304 7332 5.163131 GCCTAACCCATTATTAACCTCCTCA 60.163 44.000 0.00 0.00 0.00 3.86
6352 7380 5.128919 CCTAATGTAGCAAAGGAGCAAGAT 58.871 41.667 0.00 0.00 36.85 2.40
6412 7440 4.106925 GGGGAGCAGCAGGAGTGG 62.107 72.222 0.00 0.00 0.00 4.00
6461 7489 2.328099 GGTGCAGCCGACCAAGAAG 61.328 63.158 4.03 0.00 33.25 2.85
6494 7522 1.770110 TGGTGGTGACAAGGAGCCT 60.770 57.895 0.00 0.00 46.06 4.58
6506 7534 1.524849 GGAGCCTGATTTCCTCGGC 60.525 63.158 0.00 0.00 41.18 5.54
6589 7617 2.057137 AAGAGGTATGTACGCCGGTA 57.943 50.000 1.90 0.00 0.00 4.02
6597 7625 1.361632 GTACGCCGGTATCTGTCCC 59.638 63.158 1.90 0.00 0.00 4.46
6605 7633 0.318762 GGTATCTGTCCCGGATCTGC 59.681 60.000 0.73 0.00 31.33 4.26
6610 7638 0.754957 CTGTCCCGGATCTGCTCTCT 60.755 60.000 0.73 0.00 0.00 3.10
6644 7672 1.478654 GGTGGGTGGTCTTGTGTTGAT 60.479 52.381 0.00 0.00 0.00 2.57
6645 7673 1.608590 GTGGGTGGTCTTGTGTTGATG 59.391 52.381 0.00 0.00 0.00 3.07
6646 7674 1.492599 TGGGTGGTCTTGTGTTGATGA 59.507 47.619 0.00 0.00 0.00 2.92
6647 7675 2.092158 TGGGTGGTCTTGTGTTGATGAA 60.092 45.455 0.00 0.00 0.00 2.57
6648 7676 2.293399 GGGTGGTCTTGTGTTGATGAAC 59.707 50.000 0.00 0.00 0.00 3.18
6649 7677 2.293399 GGTGGTCTTGTGTTGATGAACC 59.707 50.000 0.00 0.00 0.00 3.62
6650 7678 2.948979 GTGGTCTTGTGTTGATGAACCA 59.051 45.455 0.00 0.00 0.00 3.67
6651 7679 3.569701 GTGGTCTTGTGTTGATGAACCAT 59.430 43.478 0.00 0.00 0.00 3.55
6652 7680 3.569277 TGGTCTTGTGTTGATGAACCATG 59.431 43.478 0.00 0.00 0.00 3.66
6653 7681 3.569701 GGTCTTGTGTTGATGAACCATGT 59.430 43.478 0.00 0.00 0.00 3.21
6654 7682 4.539870 GTCTTGTGTTGATGAACCATGTG 58.460 43.478 0.00 0.00 0.00 3.21
6829 7858 3.321968 ACCAGAAAAACTCCCTGCATTTC 59.678 43.478 0.00 0.00 0.00 2.17
6893 7922 2.100749 ACTGGTTGCAAGCCTGTTAAAC 59.899 45.455 24.81 0.00 35.11 2.01
7172 10163 7.657354 AGAACATTTGGATTTTCTTACAAAGGC 59.343 33.333 0.00 0.00 37.92 4.35
7173 10164 6.230472 ACATTTGGATTTTCTTACAAAGGCC 58.770 36.000 0.00 0.00 37.92 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.488167 CCACCCCACATAACACAACAGA 60.488 50.000 0.00 0.00 0.00 3.41
18 19 1.885887 CCACCCCACATAACACAACAG 59.114 52.381 0.00 0.00 0.00 3.16
22 23 1.770985 CCCCACCCCACATAACACA 59.229 57.895 0.00 0.00 0.00 3.72
23 24 1.000145 CCCCCACCCCACATAACAC 60.000 63.158 0.00 0.00 0.00 3.32
24 25 1.074895 AACCCCCACCCCACATAACA 61.075 55.000 0.00 0.00 0.00 2.41
110 111 1.065491 AGTTCAACCAGCTGACACACA 60.065 47.619 17.39 0.00 0.00 3.72
113 114 2.017049 ACAAGTTCAACCAGCTGACAC 58.983 47.619 17.39 3.99 0.00 3.67
118 119 2.146342 CGATCACAAGTTCAACCAGCT 58.854 47.619 0.00 0.00 0.00 4.24
256 257 6.705863 AATCTCCAGCAAATAGACAAATCC 57.294 37.500 0.00 0.00 0.00 3.01
280 282 7.792032 AGCTTAGAATAACATAACTGCCAGTA 58.208 34.615 0.00 0.00 0.00 2.74
283 285 6.649155 TGAGCTTAGAATAACATAACTGCCA 58.351 36.000 0.00 0.00 0.00 4.92
297 299 8.850156 GCCCAAATCTATAATTTGAGCTTAGAA 58.150 33.333 11.12 0.00 38.92 2.10
299 301 8.169977 TGCCCAAATCTATAATTTGAGCTTAG 57.830 34.615 15.04 0.00 41.37 2.18
312 315 6.325352 ACCATTATTCCATGCCCAAATCTAT 58.675 36.000 0.00 0.00 0.00 1.98
330 333 6.826741 GCAAAGGGAGTACTAATCAACCATTA 59.173 38.462 0.00 0.00 0.00 1.90
331 334 5.652452 GCAAAGGGAGTACTAATCAACCATT 59.348 40.000 0.00 0.00 0.00 3.16
334 337 4.585879 TGCAAAGGGAGTACTAATCAACC 58.414 43.478 0.00 0.00 0.00 3.77
341 344 5.686753 TGTTTCTTTGCAAAGGGAGTACTA 58.313 37.500 33.01 13.16 36.67 1.82
342 345 4.532834 TGTTTCTTTGCAAAGGGAGTACT 58.467 39.130 33.01 0.00 36.67 2.73
343 346 4.911514 TGTTTCTTTGCAAAGGGAGTAC 57.088 40.909 33.01 23.19 36.67 2.73
344 347 7.589958 TTTATGTTTCTTTGCAAAGGGAGTA 57.410 32.000 33.01 18.84 36.67 2.59
345 348 6.478512 TTTATGTTTCTTTGCAAAGGGAGT 57.521 33.333 33.01 19.76 36.67 3.85
346 349 6.986231 ACTTTTATGTTTCTTTGCAAAGGGAG 59.014 34.615 33.01 19.84 36.67 4.30
347 350 6.760770 CACTTTTATGTTTCTTTGCAAAGGGA 59.239 34.615 33.01 21.58 36.67 4.20
348 351 6.538381 ACACTTTTATGTTTCTTTGCAAAGGG 59.462 34.615 33.01 14.79 36.67 3.95
349 352 7.538303 ACACTTTTATGTTTCTTTGCAAAGG 57.462 32.000 33.01 18.07 36.67 3.11
405 408 9.853177 CTTTGTACTCCCTCCATAAAGAAATAT 57.147 33.333 0.00 0.00 0.00 1.28
406 409 8.832735 ACTTTGTACTCCCTCCATAAAGAAATA 58.167 33.333 0.00 0.00 0.00 1.40
407 410 7.699878 ACTTTGTACTCCCTCCATAAAGAAAT 58.300 34.615 0.00 0.00 0.00 2.17
408 411 7.086685 ACTTTGTACTCCCTCCATAAAGAAA 57.913 36.000 0.00 0.00 0.00 2.52
409 412 6.697641 ACTTTGTACTCCCTCCATAAAGAA 57.302 37.500 0.00 0.00 0.00 2.52
410 413 6.697641 AACTTTGTACTCCCTCCATAAAGA 57.302 37.500 0.00 0.00 0.00 2.52
411 414 8.893727 CATTAACTTTGTACTCCCTCCATAAAG 58.106 37.037 0.00 0.00 0.00 1.85
412 415 8.387813 ACATTAACTTTGTACTCCCTCCATAAA 58.612 33.333 0.00 0.00 0.00 1.40
413 416 7.924541 ACATTAACTTTGTACTCCCTCCATAA 58.075 34.615 0.00 0.00 0.00 1.90
414 417 7.504926 ACATTAACTTTGTACTCCCTCCATA 57.495 36.000 0.00 0.00 0.00 2.74
415 418 6.388619 ACATTAACTTTGTACTCCCTCCAT 57.611 37.500 0.00 0.00 0.00 3.41
416 419 5.836024 ACATTAACTTTGTACTCCCTCCA 57.164 39.130 0.00 0.00 0.00 3.86
417 420 6.346896 CCTACATTAACTTTGTACTCCCTCC 58.653 44.000 0.00 0.00 0.00 4.30
418 421 6.346896 CCCTACATTAACTTTGTACTCCCTC 58.653 44.000 0.00 0.00 0.00 4.30
419 422 5.191124 CCCCTACATTAACTTTGTACTCCCT 59.809 44.000 0.00 0.00 0.00 4.20
420 423 5.190330 TCCCCTACATTAACTTTGTACTCCC 59.810 44.000 0.00 0.00 0.00 4.30
421 424 6.303903 TCCCCTACATTAACTTTGTACTCC 57.696 41.667 0.00 0.00 0.00 3.85
422 425 8.044908 TGAATCCCCTACATTAACTTTGTACTC 58.955 37.037 0.00 0.00 0.00 2.59
425 428 7.608761 GTGTGAATCCCCTACATTAACTTTGTA 59.391 37.037 0.00 0.00 0.00 2.41
439 442 3.359033 CATCAACATGTGTGAATCCCCT 58.641 45.455 0.00 0.00 0.00 4.79
443 446 3.507233 ACACCCATCAACATGTGTGAATC 59.493 43.478 16.13 0.00 39.96 2.52
444 447 3.499338 ACACCCATCAACATGTGTGAAT 58.501 40.909 16.13 0.00 39.96 2.57
446 449 2.655090 ACACCCATCAACATGTGTGA 57.345 45.000 16.13 13.71 39.96 3.58
450 453 2.665165 ACAACACACCCATCAACATGT 58.335 42.857 0.00 0.00 0.00 3.21
451 454 4.844998 TTACAACACACCCATCAACATG 57.155 40.909 0.00 0.00 0.00 3.21
452 455 4.462483 GGATTACAACACACCCATCAACAT 59.538 41.667 0.00 0.00 0.00 2.71
454 457 4.079253 AGGATTACAACACACCCATCAAC 58.921 43.478 0.00 0.00 0.00 3.18
455 458 4.380843 AGGATTACAACACACCCATCAA 57.619 40.909 0.00 0.00 0.00 2.57
456 459 4.380843 AAGGATTACAACACACCCATCA 57.619 40.909 0.00 0.00 0.00 3.07
457 460 5.242838 TGAAAAGGATTACAACACACCCATC 59.757 40.000 0.00 0.00 0.00 3.51
461 464 4.278419 AGCTGAAAAGGATTACAACACACC 59.722 41.667 0.00 0.00 0.00 4.16
462 465 5.215160 CAGCTGAAAAGGATTACAACACAC 58.785 41.667 8.42 0.00 0.00 3.82
463 466 4.261572 GCAGCTGAAAAGGATTACAACACA 60.262 41.667 20.43 0.00 0.00 3.72
464 467 4.229876 GCAGCTGAAAAGGATTACAACAC 58.770 43.478 20.43 0.00 0.00 3.32
465 468 3.888323 TGCAGCTGAAAAGGATTACAACA 59.112 39.130 20.43 0.00 0.00 3.33
466 469 4.022849 AGTGCAGCTGAAAAGGATTACAAC 60.023 41.667 20.43 0.00 0.00 3.32
468 471 3.754965 AGTGCAGCTGAAAAGGATTACA 58.245 40.909 20.43 0.00 0.00 2.41
469 472 4.773323 AAGTGCAGCTGAAAAGGATTAC 57.227 40.909 20.43 0.00 0.00 1.89
471 474 4.401925 ACTAAGTGCAGCTGAAAAGGATT 58.598 39.130 20.43 4.07 0.00 3.01
472 475 4.006319 GACTAAGTGCAGCTGAAAAGGAT 58.994 43.478 20.43 0.00 0.00 3.24
474 477 3.141398 TGACTAAGTGCAGCTGAAAAGG 58.859 45.455 20.43 4.72 0.00 3.11
475 478 4.818534 TTGACTAAGTGCAGCTGAAAAG 57.181 40.909 20.43 8.18 0.00 2.27
476 479 5.299028 TGATTTGACTAAGTGCAGCTGAAAA 59.701 36.000 20.43 0.00 0.00 2.29
478 481 4.388485 TGATTTGACTAAGTGCAGCTGAA 58.612 39.130 20.43 2.96 0.00 3.02
479 482 4.006780 TGATTTGACTAAGTGCAGCTGA 57.993 40.909 20.43 0.00 0.00 4.26
480 483 4.155462 ACATGATTTGACTAAGTGCAGCTG 59.845 41.667 10.11 10.11 0.00 4.24
482 485 4.394300 AGACATGATTTGACTAAGTGCAGC 59.606 41.667 0.00 0.00 0.00 5.25
483 486 7.118245 TGTTAGACATGATTTGACTAAGTGCAG 59.882 37.037 0.00 0.00 41.22 4.41
484 487 6.934083 TGTTAGACATGATTTGACTAAGTGCA 59.066 34.615 0.00 0.00 41.22 4.57
485 488 7.364522 TGTTAGACATGATTTGACTAAGTGC 57.635 36.000 0.00 0.00 41.22 4.40
587 601 5.413309 TTCTCTCCCTCTGATGTTTTCTC 57.587 43.478 0.00 0.00 0.00 2.87
596 610 5.013079 TGCTAAATGTTTTCTCTCCCTCTGA 59.987 40.000 0.00 0.00 0.00 3.27
659 698 1.036707 CCGTGGTGTGTTTTCCCATT 58.963 50.000 0.00 0.00 0.00 3.16
660 699 0.106419 ACCGTGGTGTGTTTTCCCAT 60.106 50.000 0.00 0.00 0.00 4.00
661 700 0.748729 GACCGTGGTGTGTTTTCCCA 60.749 55.000 0.00 0.00 0.00 4.37
662 701 1.778027 CGACCGTGGTGTGTTTTCCC 61.778 60.000 0.00 0.00 0.00 3.97
663 702 0.810823 TCGACCGTGGTGTGTTTTCC 60.811 55.000 0.00 0.00 0.00 3.13
664 703 1.223187 ATCGACCGTGGTGTGTTTTC 58.777 50.000 0.00 0.00 0.00 2.29
671 717 0.179145 GTGACCTATCGACCGTGGTG 60.179 60.000 0.00 0.00 32.30 4.17
672 718 0.609957 TGTGACCTATCGACCGTGGT 60.610 55.000 0.00 0.00 35.23 4.16
673 719 0.744874 ATGTGACCTATCGACCGTGG 59.255 55.000 0.00 0.00 0.00 4.94
677 723 0.753262 AGGCATGTGACCTATCGACC 59.247 55.000 0.00 0.00 35.10 4.79
680 726 2.477825 CAAGAGGCATGTGACCTATCG 58.522 52.381 0.00 0.00 37.77 2.92
706 752 3.624777 CCTGGGATCACAGTTATGCTTT 58.375 45.455 23.26 0.00 36.75 3.51
707 753 2.092212 CCCTGGGATCACAGTTATGCTT 60.092 50.000 23.26 0.00 36.75 3.91
708 754 1.492176 CCCTGGGATCACAGTTATGCT 59.508 52.381 23.26 0.00 36.75 3.79
709 755 1.477558 CCCCTGGGATCACAGTTATGC 60.478 57.143 23.26 0.00 36.75 3.14
710 756 1.846439 ACCCCTGGGATCACAGTTATG 59.154 52.381 23.26 10.81 36.75 1.90
712 760 1.580059 GACCCCTGGGATCACAGTTA 58.420 55.000 23.26 0.00 36.75 2.24
716 764 1.987855 GACGACCCCTGGGATCACA 60.988 63.158 16.20 0.00 38.96 3.58
724 772 2.711922 CCGGAGAAGACGACCCCTG 61.712 68.421 0.00 0.00 0.00 4.45
740 788 4.267452 CCAATTAAAATGGTTGATTCGCCG 59.733 41.667 3.13 0.00 33.08 6.46
757 805 2.960384 TCGGCGATAGAGTTCCCAATTA 59.040 45.455 4.99 0.00 39.76 1.40
761 809 0.395311 ACTCGGCGATAGAGTTCCCA 60.395 55.000 11.27 0.00 45.74 4.37
762 810 2.416901 ACTCGGCGATAGAGTTCCC 58.583 57.895 11.27 0.00 45.74 3.97
802 851 5.179368 ACATGATGTCCTTTGTGTAACTTCG 59.821 40.000 0.00 0.00 38.04 3.79
829 878 4.406456 TGTGTTCCCTTCATAATTGCTGT 58.594 39.130 0.00 0.00 0.00 4.40
922 971 7.285629 TGTCCTGGTACATCAGATTTCTACTAG 59.714 40.741 0.00 0.00 38.20 2.57
923 972 7.123383 TGTCCTGGTACATCAGATTTCTACTA 58.877 38.462 0.00 0.00 38.20 1.82
925 974 6.222038 TGTCCTGGTACATCAGATTTCTAC 57.778 41.667 0.00 0.00 38.20 2.59
927 976 5.762179 TTGTCCTGGTACATCAGATTTCT 57.238 39.130 0.00 0.00 38.20 2.52
928 977 6.173339 TCTTTGTCCTGGTACATCAGATTTC 58.827 40.000 0.00 0.00 38.20 2.17
929 978 6.126863 TCTTTGTCCTGGTACATCAGATTT 57.873 37.500 0.00 0.00 38.20 2.17
954 1018 2.290367 GGCAAAACTGCAAAATGTTCCC 59.710 45.455 0.00 0.00 36.33 3.97
1152 1250 1.683917 CCCTAGGTGAGATGACCGAAG 59.316 57.143 8.29 0.00 41.35 3.79
1462 1609 5.344066 ACGCAGATATTACTTCAGTGACAG 58.656 41.667 0.00 0.00 0.00 3.51
1511 1661 3.689347 CATCTTGAATTGTCCACCTGGA 58.311 45.455 0.00 0.00 43.08 3.86
1512 1662 2.165030 GCATCTTGAATTGTCCACCTGG 59.835 50.000 0.00 0.00 0.00 4.45
1557 2049 4.607293 TCAACTAGCAACATCACTGAGT 57.393 40.909 0.00 0.00 0.00 3.41
1587 2080 0.106868 TTGCATCAGGATCTGGGCAG 60.107 55.000 12.24 0.00 40.77 4.85
1598 2092 1.522668 TCCGGTTGAGTTTGCATCAG 58.477 50.000 0.00 0.00 0.00 2.90
1611 2106 8.980481 AGTAATCAAGATTATGATTTCCGGTT 57.020 30.769 0.00 0.00 45.39 4.44
1634 2129 7.175467 TGAATGAGTGTATGATTTGCAAGAAGT 59.825 33.333 0.00 0.00 0.00 3.01
1675 2176 1.256812 GGCTACACACTTTGGCCATT 58.743 50.000 6.09 0.00 42.08 3.16
1682 2183 1.133792 ACTGCAAGGGCTACACACTTT 60.134 47.619 0.00 0.00 41.91 2.66
1688 2189 3.827722 ACTTTTAACTGCAAGGGCTACA 58.172 40.909 0.00 0.00 41.91 2.74
1689 2190 4.546570 CAACTTTTAACTGCAAGGGCTAC 58.453 43.478 0.00 0.00 41.91 3.58
1725 2226 3.244875 TGGGATCAATTGCTGTACAGTGT 60.245 43.478 23.44 0.00 0.00 3.55
1744 2253 2.975489 AGTAAGCAGGACTATCCATGGG 59.025 50.000 13.02 0.00 39.61 4.00
1773 2282 0.810426 TTCAGTGTACCGCGCACAAA 60.810 50.000 15.98 8.13 39.17 2.83
1774 2283 0.601576 ATTCAGTGTACCGCGCACAA 60.602 50.000 15.98 4.77 39.17 3.33
1775 2284 1.005512 ATTCAGTGTACCGCGCACA 60.006 52.632 15.98 12.02 39.17 4.57
1776 2285 1.011968 TGATTCAGTGTACCGCGCAC 61.012 55.000 8.75 3.47 37.13 5.34
1778 2287 1.847818 TATGATTCAGTGTACCGCGC 58.152 50.000 0.00 0.00 0.00 6.86
1780 2289 4.868171 TCACTTTATGATTCAGTGTACCGC 59.132 41.667 4.33 0.00 39.24 5.68
1810 2339 3.511699 TGTTCACAGCTATTGTCGCTAG 58.488 45.455 0.00 0.00 38.16 3.42
1824 2353 4.042809 AGGTCTTCCCATGTTATGTTCACA 59.957 41.667 0.00 0.00 34.66 3.58
1837 2491 6.548321 ACAAACAATATACAAGGTCTTCCCA 58.452 36.000 0.00 0.00 34.66 4.37
1839 2493 8.788325 AGTACAAACAATATACAAGGTCTTCC 57.212 34.615 0.00 0.00 0.00 3.46
1841 2495 9.436957 CAGAGTACAAACAATATACAAGGTCTT 57.563 33.333 0.00 0.00 0.00 3.01
1843 2497 8.773404 ACAGAGTACAAACAATATACAAGGTC 57.227 34.615 0.00 0.00 0.00 3.85
1877 2531 8.802267 GCCATATTTTGAGCCCTTAATATACAA 58.198 33.333 0.00 0.00 0.00 2.41
1881 2535 6.071165 GCTGCCATATTTTGAGCCCTTAATAT 60.071 38.462 0.00 0.00 0.00 1.28
1885 2539 2.958355 GCTGCCATATTTTGAGCCCTTA 59.042 45.455 0.00 0.00 0.00 2.69
1888 2542 1.113788 TGCTGCCATATTTTGAGCCC 58.886 50.000 0.00 0.00 0.00 5.19
1934 2589 8.827677 CCACTACTATTTGACTAAAATACCAGC 58.172 37.037 0.00 0.00 39.29 4.85
1935 2590 9.326413 CCCACTACTATTTGACTAAAATACCAG 57.674 37.037 0.00 0.00 39.29 4.00
1944 2599 5.720041 ACAAGAGCCCACTACTATTTGACTA 59.280 40.000 0.00 0.00 0.00 2.59
1945 2600 4.532521 ACAAGAGCCCACTACTATTTGACT 59.467 41.667 0.00 0.00 0.00 3.41
1946 2601 4.631813 CACAAGAGCCCACTACTATTTGAC 59.368 45.833 0.00 0.00 0.00 3.18
1947 2602 4.286032 ACACAAGAGCCCACTACTATTTGA 59.714 41.667 0.00 0.00 0.00 2.69
1948 2603 4.579869 ACACAAGAGCCCACTACTATTTG 58.420 43.478 0.00 0.00 0.00 2.32
1949 2604 4.910458 ACACAAGAGCCCACTACTATTT 57.090 40.909 0.00 0.00 0.00 1.40
1952 2607 3.507411 AGAACACAAGAGCCCACTACTA 58.493 45.455 0.00 0.00 0.00 1.82
1995 2686 5.139435 TCAGTGAACAACTCATCAGGTAG 57.861 43.478 0.00 0.00 36.83 3.18
2001 2692 5.675575 GCAATGGATCAGTGAACAACTCATC 60.676 44.000 0.00 0.00 35.73 2.92
2047 2745 7.233632 AGCCCAAATAATAACATCATCTAGCA 58.766 34.615 0.00 0.00 0.00 3.49
2069 2767 6.441093 TCATATCACAAGAAAACATGAGCC 57.559 37.500 0.00 0.00 0.00 4.70
2110 2810 4.019411 TGGCAGGACTTGAGACATAATTGA 60.019 41.667 0.00 0.00 0.00 2.57
2155 2881 8.925338 AGACTTATATTTAGAAACGGATGGAGT 58.075 33.333 0.00 0.00 0.00 3.85
2156 2882 9.765795 AAGACTTATATTTAGAAACGGATGGAG 57.234 33.333 0.00 0.00 0.00 3.86
2174 2900 8.877195 TGTAGTGGAACCTCTAAAAAGACTTAT 58.123 33.333 4.53 0.00 37.80 1.73
2175 2901 8.253867 TGTAGTGGAACCTCTAAAAAGACTTA 57.746 34.615 4.53 0.00 37.80 2.24
2176 2902 7.070821 TCTGTAGTGGAACCTCTAAAAAGACTT 59.929 37.037 4.53 0.00 37.80 3.01
2177 2903 6.553852 TCTGTAGTGGAACCTCTAAAAAGACT 59.446 38.462 4.53 0.00 37.80 3.24
2178 2904 6.645827 GTCTGTAGTGGAACCTCTAAAAAGAC 59.354 42.308 16.50 16.50 37.80 3.01
2179 2905 6.553852 AGTCTGTAGTGGAACCTCTAAAAAGA 59.446 38.462 4.53 5.96 37.80 2.52
2180 2906 6.760291 AGTCTGTAGTGGAACCTCTAAAAAG 58.240 40.000 4.53 4.19 37.80 2.27
2181 2907 6.742559 AGTCTGTAGTGGAACCTCTAAAAA 57.257 37.500 4.53 0.00 37.80 1.94
2182 2908 6.779049 TGTAGTCTGTAGTGGAACCTCTAAAA 59.221 38.462 4.53 0.00 37.80 1.52
2183 2909 6.309357 TGTAGTCTGTAGTGGAACCTCTAAA 58.691 40.000 4.53 0.00 37.80 1.85
2184 2910 5.884322 TGTAGTCTGTAGTGGAACCTCTAA 58.116 41.667 4.53 0.00 37.80 2.10
2185 2911 5.509832 TGTAGTCTGTAGTGGAACCTCTA 57.490 43.478 0.00 0.00 37.80 2.43
2186 2912 4.383931 TGTAGTCTGTAGTGGAACCTCT 57.616 45.455 1.20 1.20 37.80 3.69
2187 2913 5.220815 CGTATGTAGTCTGTAGTGGAACCTC 60.221 48.000 0.00 0.00 37.80 3.85
2188 2914 4.639310 CGTATGTAGTCTGTAGTGGAACCT 59.361 45.833 0.00 0.00 37.80 3.50
2189 2915 4.201990 CCGTATGTAGTCTGTAGTGGAACC 60.202 50.000 0.00 0.00 37.80 3.62
2190 2916 4.637534 TCCGTATGTAGTCTGTAGTGGAAC 59.362 45.833 0.00 0.00 0.00 3.62
2191 2917 4.847198 TCCGTATGTAGTCTGTAGTGGAA 58.153 43.478 0.00 0.00 0.00 3.53
2192 2918 4.449131 CTCCGTATGTAGTCTGTAGTGGA 58.551 47.826 0.00 0.00 0.00 4.02
2193 2919 3.003482 GCTCCGTATGTAGTCTGTAGTGG 59.997 52.174 0.00 0.00 0.00 4.00
2194 2920 3.626217 TGCTCCGTATGTAGTCTGTAGTG 59.374 47.826 0.00 0.00 0.00 2.74
2195 2921 3.882444 TGCTCCGTATGTAGTCTGTAGT 58.118 45.455 0.00 0.00 0.00 2.73
2196 2922 4.895224 TTGCTCCGTATGTAGTCTGTAG 57.105 45.455 0.00 0.00 0.00 2.74
2197 2923 5.648178 TTTTGCTCCGTATGTAGTCTGTA 57.352 39.130 0.00 0.00 0.00 2.74
2198 2924 4.530710 TTTTGCTCCGTATGTAGTCTGT 57.469 40.909 0.00 0.00 0.00 3.41
2199 2925 5.109210 TCATTTTGCTCCGTATGTAGTCTG 58.891 41.667 0.00 0.00 0.00 3.51
2200 2926 5.105310 ACTCATTTTGCTCCGTATGTAGTCT 60.105 40.000 0.00 0.00 0.00 3.24
2201 2927 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
2202 2928 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
2203 2929 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
2204 2930 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
2205 2931 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
2206 2932 4.437390 GGTTCACTCATTTTGCTCCGTATG 60.437 45.833 0.00 0.00 0.00 2.39
2207 2933 3.689649 GGTTCACTCATTTTGCTCCGTAT 59.310 43.478 0.00 0.00 0.00 3.06
2208 2934 3.071479 GGTTCACTCATTTTGCTCCGTA 58.929 45.455 0.00 0.00 0.00 4.02
2209 2935 1.880027 GGTTCACTCATTTTGCTCCGT 59.120 47.619 0.00 0.00 0.00 4.69
2210 2936 1.200020 GGGTTCACTCATTTTGCTCCG 59.800 52.381 0.00 0.00 0.00 4.63
2211 2937 2.029918 GTGGGTTCACTCATTTTGCTCC 60.030 50.000 0.00 0.00 40.58 4.70
2212 2938 2.622942 TGTGGGTTCACTCATTTTGCTC 59.377 45.455 0.00 0.00 43.94 4.26
2213 2939 2.362077 GTGTGGGTTCACTCATTTTGCT 59.638 45.455 0.00 0.00 43.94 3.91
2214 2940 2.362077 AGTGTGGGTTCACTCATTTTGC 59.638 45.455 0.00 0.00 44.07 3.68
2222 2948 5.307196 ACATACTTTAGAGTGTGGGTTCACT 59.693 40.000 13.57 0.00 45.97 3.41
2223 2949 5.548406 ACATACTTTAGAGTGTGGGTTCAC 58.452 41.667 13.57 0.00 45.97 3.18
2224 2950 5.542635 AGACATACTTTAGAGTGTGGGTTCA 59.457 40.000 13.57 0.00 45.97 3.18
2225 2951 6.038997 AGACATACTTTAGAGTGTGGGTTC 57.961 41.667 13.57 3.84 45.97 3.62
2226 2952 7.735326 ATAGACATACTTTAGAGTGTGGGTT 57.265 36.000 13.57 2.94 45.97 4.11
2250 2976 9.828039 CCACTATAGACTACATACGGATGTATA 57.172 37.037 20.64 11.03 45.42 1.47
2251 2977 8.546322 TCCACTATAGACTACATACGGATGTAT 58.454 37.037 20.64 9.39 45.42 2.29
2252 2978 7.910584 TCCACTATAGACTACATACGGATGTA 58.089 38.462 19.32 19.32 44.77 2.29
2254 2980 7.683437 TTCCACTATAGACTACATACGGATG 57.317 40.000 5.94 5.94 39.16 3.51
2255 2981 8.330247 AGATTCCACTATAGACTACATACGGAT 58.670 37.037 6.78 0.00 0.00 4.18
2256 2982 7.687388 AGATTCCACTATAGACTACATACGGA 58.313 38.462 6.78 0.00 0.00 4.69
2257 2983 7.825270 AGAGATTCCACTATAGACTACATACGG 59.175 40.741 6.78 0.00 0.00 4.02
2258 2984 8.780846 AGAGATTCCACTATAGACTACATACG 57.219 38.462 6.78 0.00 0.00 3.06
2284 3010 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
2285 3011 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
2286 3012 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
2287 3013 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
2288 3014 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
2289 3015 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
2290 3016 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
2291 3017 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
2292 3018 7.300658 ACTACTCCCTCCGTTCCTAAATATAA 58.699 38.462 0.00 0.00 0.00 0.98
2293 3019 6.856757 ACTACTCCCTCCGTTCCTAAATATA 58.143 40.000 0.00 0.00 0.00 0.86
2294 3020 5.713807 ACTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
2295 3021 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
2296 3022 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
2297 3023 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
2298 3024 3.463048 AACTACTCCCTCCGTTCCTAA 57.537 47.619 0.00 0.00 0.00 2.69
2299 3025 4.803329 ATAACTACTCCCTCCGTTCCTA 57.197 45.455 0.00 0.00 0.00 2.94
2300 3026 3.684408 ATAACTACTCCCTCCGTTCCT 57.316 47.619 0.00 0.00 0.00 3.36
2301 3027 4.210331 TGTATAACTACTCCCTCCGTTCC 58.790 47.826 0.00 0.00 0.00 3.62
2302 3028 6.402456 AATGTATAACTACTCCCTCCGTTC 57.598 41.667 0.00 0.00 0.00 3.95
2303 3029 6.803366 AAATGTATAACTACTCCCTCCGTT 57.197 37.500 0.00 0.00 0.00 4.44
2304 3030 6.016777 CGTAAATGTATAACTACTCCCTCCGT 60.017 42.308 0.00 0.00 0.00 4.69
2305 3031 6.205464 TCGTAAATGTATAACTACTCCCTCCG 59.795 42.308 0.00 0.00 0.00 4.63
2306 3032 7.516198 TCGTAAATGTATAACTACTCCCTCC 57.484 40.000 0.00 0.00 0.00 4.30
2307 3033 8.574737 ACATCGTAAATGTATAACTACTCCCTC 58.425 37.037 0.00 0.00 0.00 4.30
2308 3034 8.474710 ACATCGTAAATGTATAACTACTCCCT 57.525 34.615 0.00 0.00 0.00 4.20
2309 3035 7.811713 GGACATCGTAAATGTATAACTACTCCC 59.188 40.741 0.00 0.00 31.52 4.30
2310 3036 7.811713 GGGACATCGTAAATGTATAACTACTCC 59.188 40.741 0.00 0.00 31.52 3.85
2311 3037 7.811713 GGGGACATCGTAAATGTATAACTACTC 59.188 40.741 0.00 0.00 31.52 2.59
2312 3038 7.288389 TGGGGACATCGTAAATGTATAACTACT 59.712 37.037 0.00 0.00 33.40 2.57
2313 3039 7.436118 TGGGGACATCGTAAATGTATAACTAC 58.564 38.462 0.00 0.00 33.40 2.73
2372 3102 5.166398 GCTCCTTCCACAAATTGAAGAATG 58.834 41.667 0.00 0.04 40.30 2.67
2388 3118 0.393537 CACCACATCCCTGCTCCTTC 60.394 60.000 0.00 0.00 0.00 3.46
2406 3136 4.136796 GCAAGTATCTAACATGGCATCCA 58.863 43.478 0.00 0.00 38.19 3.41
2476 3207 7.661536 AAATATAGGAGAGCTTAGTCACACA 57.338 36.000 0.00 0.00 0.00 3.72
2477 3208 7.439655 CCAAAATATAGGAGAGCTTAGTCACAC 59.560 40.741 0.00 0.00 0.00 3.82
2538 3275 3.242870 GCAGCATGTATTAGCTTCCACAC 60.243 47.826 0.00 0.00 39.50 3.82
2590 3327 6.925165 ACATTCATGTAAAGCAAAACCTCAAG 59.075 34.615 0.00 0.00 39.68 3.02
2767 3504 7.523219 ACGTGAATCGAGTGCATTTTTATTTA 58.477 30.769 0.00 0.00 42.86 1.40
2777 3518 2.931512 TCATACGTGAATCGAGTGCA 57.068 45.000 0.00 0.00 42.86 4.57
2778 3519 5.610552 GCTTAATCATACGTGAATCGAGTGC 60.611 44.000 0.00 0.00 42.86 4.40
2779 3520 5.687730 AGCTTAATCATACGTGAATCGAGTG 59.312 40.000 0.00 0.00 42.86 3.51
2869 3610 1.792757 TTCTTGCCACCCTGCTCCAT 61.793 55.000 0.00 0.00 0.00 3.41
2894 3635 0.949105 GCAGAACGACCGGTCATTGT 60.949 55.000 32.80 21.32 33.52 2.71
2903 3644 0.166814 GTTGATGCTGCAGAACGACC 59.833 55.000 20.43 0.00 0.00 4.79
3075 3870 0.182299 TGACACTGACACCAATGGCA 59.818 50.000 0.00 0.00 43.67 4.92
3076 3871 0.877071 CTGACACTGACACCAATGGC 59.123 55.000 0.00 0.00 0.00 4.40
3077 3872 2.549064 TCTGACACTGACACCAATGG 57.451 50.000 0.00 0.00 0.00 3.16
3078 3873 3.005554 GGATCTGACACTGACACCAATG 58.994 50.000 0.00 0.00 0.00 2.82
3079 3874 2.354103 CGGATCTGACACTGACACCAAT 60.354 50.000 0.00 0.00 0.00 3.16
3080 3875 1.000843 CGGATCTGACACTGACACCAA 59.999 52.381 0.00 0.00 0.00 3.67
3081 3876 0.603065 CGGATCTGACACTGACACCA 59.397 55.000 0.00 0.00 0.00 4.17
3082 3877 0.737715 GCGGATCTGACACTGACACC 60.738 60.000 5.48 0.00 0.00 4.16
3083 3878 0.038251 TGCGGATCTGACACTGACAC 60.038 55.000 5.48 0.00 0.00 3.67
3142 3937 1.874562 CTGAAGCAGGCTCAGTTGC 59.125 57.895 0.00 0.00 40.57 4.17
3173 3968 4.092968 CAGTATTACTTCGGACCAAAGCAC 59.907 45.833 0.00 0.00 0.00 4.40
3181 3976 7.972277 TGACATAAGTTCAGTATTACTTCGGAC 59.028 37.037 0.00 0.00 36.16 4.79
3305 4100 3.256879 TGGTCTCTCTCCATCATTATCGC 59.743 47.826 0.00 0.00 0.00 4.58
3334 4129 6.139048 TGATAAATGAATGCTGGTGTCATG 57.861 37.500 0.00 0.00 32.38 3.07
3344 4139 8.976986 ACTGAGTTTCTTTGATAAATGAATGC 57.023 30.769 0.00 0.00 0.00 3.56
3363 4158 5.688814 TGATCAATCCTTCATGACTGAGT 57.311 39.130 0.00 0.00 31.68 3.41
3383 4178 1.152902 GCCACCATAGCCTGCATGA 60.153 57.895 0.00 0.00 0.00 3.07
3404 4199 4.852134 GCATCAGCTCTCTCAGAATCTA 57.148 45.455 0.00 0.00 37.91 1.98
3418 4213 3.764885 ATTTGTCCGTAAAGCATCAGC 57.235 42.857 0.00 0.00 42.56 4.26
3440 4238 6.003326 TCAGGCAAGTGATTTGTTTCAGATA 58.997 36.000 0.00 0.00 39.08 1.98
3472 4270 2.236893 TCATGCCTGTAACATCTGCAGA 59.763 45.455 20.79 20.79 40.00 4.26
3490 4288 5.687780 TCTGCCATGTAATTCTGTCATCAT 58.312 37.500 0.00 0.00 0.00 2.45
3534 4332 0.392706 TCTCGCCACTGTCATGTTGT 59.607 50.000 0.00 0.00 0.00 3.32
3649 4447 4.065088 CTGTTGCAGCTTACAGAAGGTAA 58.935 43.478 18.23 0.00 43.45 2.85
3821 4619 6.016276 ACCGGATGTATTATTTTCCAAGATGC 60.016 38.462 9.46 0.00 0.00 3.91
4196 5156 6.268825 TGTTGGTAGCTGTTTGTTGTTTTA 57.731 33.333 0.00 0.00 0.00 1.52
4302 5262 2.159310 CCTCTGCTGACTAGGTTCTTCG 60.159 54.545 0.00 0.00 0.00 3.79
4316 5276 3.774216 AGTTCTCTGCTTATTCCTCTGCT 59.226 43.478 0.00 0.00 0.00 4.24
4338 5298 4.390603 GGACACGCAACACTTGTATCATTA 59.609 41.667 0.00 0.00 29.43 1.90
4391 5351 2.039216 TGATGGTTACCTTGCCTTTCGA 59.961 45.455 2.07 0.00 0.00 3.71
4503 5463 3.285484 CCCATTCAACTGATCCTCCTTG 58.715 50.000 0.00 0.00 0.00 3.61
4504 5464 2.922283 ACCCATTCAACTGATCCTCCTT 59.078 45.455 0.00 0.00 0.00 3.36
4537 5497 6.430000 TCAGACTTATTGTTACCTTGCCTTTC 59.570 38.462 0.00 0.00 0.00 2.62
5096 6062 0.748005 ACGCTTGGGTGGATATGCAC 60.748 55.000 18.30 18.30 0.00 4.57
5128 6094 3.120321 AGTGTTTATGAAGCACCGTCA 57.880 42.857 2.99 0.00 33.96 4.35
5235 6203 7.711339 CCCTACAACTCTATTTATCACAAGTCC 59.289 40.741 0.00 0.00 0.00 3.85
5308 6307 9.871238 AAGAACTTCGAATAATAGAAAGTGCTA 57.129 29.630 0.00 0.00 0.00 3.49
5481 6491 4.051922 TGAGTTCTCGAAAGCTCTTGAAC 58.948 43.478 4.18 3.34 34.46 3.18
5494 6506 4.115401 TCATTCTGACCATGAGTTCTCG 57.885 45.455 0.00 0.00 0.00 4.04
5675 6687 6.599244 ACATTTCCACTACCATTCTATGTGTG 59.401 38.462 0.00 0.00 0.00 3.82
5836 6848 6.755141 CAGATATGGCTCAGTTTTTGGAATTG 59.245 38.462 0.00 0.00 0.00 2.32
6046 7065 5.922544 GCCAATGAATTGATGTTAGTATGCC 59.077 40.000 4.58 0.00 40.14 4.40
6118 7137 7.951347 AATATCTGAATCCATGGAATTAGCC 57.049 36.000 20.67 5.10 0.00 3.93
6144 7163 5.245751 TGTGAAACACATTCCTGCCATATTT 59.754 36.000 0.25 0.00 45.67 1.40
6227 7246 3.900601 AGATGGCCAGTCAATACTAGGAG 59.099 47.826 13.05 0.00 33.48 3.69
6243 7270 1.945394 CTGCATAAGGTGTCAGATGGC 59.055 52.381 0.00 0.00 35.39 4.40
6244 7271 1.945394 GCTGCATAAGGTGTCAGATGG 59.055 52.381 0.00 0.00 35.39 3.51
6245 7272 2.635714 TGCTGCATAAGGTGTCAGATG 58.364 47.619 0.00 0.00 35.39 2.90
6246 7273 3.354948 TTGCTGCATAAGGTGTCAGAT 57.645 42.857 1.84 0.00 35.39 2.90
6247 7274 2.857186 TTGCTGCATAAGGTGTCAGA 57.143 45.000 1.84 0.00 35.39 3.27
6248 7275 3.192001 ACAATTGCTGCATAAGGTGTCAG 59.808 43.478 1.84 0.00 36.02 3.51
6249 7276 3.057386 CACAATTGCTGCATAAGGTGTCA 60.057 43.478 1.84 0.00 0.00 3.58
6250 7277 3.504863 CACAATTGCTGCATAAGGTGTC 58.495 45.455 1.84 0.00 0.00 3.67
6278 7305 5.194942 AGGAGGTTAATAATGGGTTAGGCAA 59.805 40.000 0.00 0.00 0.00 4.52
6304 7332 2.350522 CGATGAACAAGTGGCTAGCTT 58.649 47.619 15.72 0.00 0.00 3.74
6336 7364 2.840038 TCCTCATCTTGCTCCTTTGCTA 59.160 45.455 0.00 0.00 0.00 3.49
6453 7481 1.073199 CGTTCCTGGCCTTCTTGGT 59.927 57.895 3.32 0.00 38.35 3.67
6494 7522 2.186903 GGCTCGCCGAGGAAATCA 59.813 61.111 16.95 0.00 0.00 2.57
6506 7534 4.735132 TCGGCGTTGAAGGGCTCG 62.735 66.667 6.85 2.22 0.00 5.03
6566 7594 1.737696 CGGCGTACATACCTCTTTGCA 60.738 52.381 0.00 0.00 0.00 4.08
6589 7617 0.105760 AGAGCAGATCCGGGACAGAT 60.106 55.000 0.00 0.00 0.00 2.90
6597 7625 0.177604 AAAGCCAGAGAGCAGATCCG 59.822 55.000 0.00 0.00 34.23 4.18
6605 7633 1.731720 CGAAGGGAAAAGCCAGAGAG 58.268 55.000 0.00 0.00 38.95 3.20
6644 7672 0.248825 GCAACAACGCACATGGTTCA 60.249 50.000 0.00 0.00 0.00 3.18
6645 7673 0.248825 TGCAACAACGCACATGGTTC 60.249 50.000 0.00 0.00 36.86 3.62
6646 7674 0.388659 ATGCAACAACGCACATGGTT 59.611 45.000 0.00 0.00 46.56 3.67
6647 7675 1.199789 CTATGCAACAACGCACATGGT 59.800 47.619 0.00 0.00 46.56 3.55
6648 7676 1.467883 CCTATGCAACAACGCACATGG 60.468 52.381 0.00 0.00 46.56 3.66
6649 7677 1.898938 CCTATGCAACAACGCACATG 58.101 50.000 0.00 0.00 46.56 3.21
6650 7678 0.171007 GCCTATGCAACAACGCACAT 59.829 50.000 0.00 0.00 46.56 3.21
6651 7679 1.578926 GCCTATGCAACAACGCACA 59.421 52.632 0.00 0.00 46.56 4.57
6652 7680 1.154035 GGCCTATGCAACAACGCAC 60.154 57.895 0.00 0.00 46.56 5.34
6654 7682 1.137404 CTGGCCTATGCAACAACGC 59.863 57.895 3.32 0.00 40.13 4.84
6665 7693 0.189574 CCTCCTCCTCATCTGGCCTA 59.810 60.000 3.32 0.00 0.00 3.93
6829 7858 6.694411 GCAGATACACTTATTTTGCAATCAGG 59.306 38.462 0.00 0.00 32.69 3.86
7120 10111 4.720273 ACTACCCCGTTTCAAATCCTATCT 59.280 41.667 0.00 0.00 0.00 1.98
7172 10163 5.063204 TCGTAATGCCAGAAATGAATAGGG 58.937 41.667 0.00 0.00 0.00 3.53
7173 10164 6.808008 ATCGTAATGCCAGAAATGAATAGG 57.192 37.500 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.