Multiple sequence alignment - TraesCS6B01G416400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G416400 chr6B 100.000 3993 0 0 1 3993 688667287 688663295 0.000000e+00 7374
1 TraesCS6B01G416400 chr6B 82.461 1089 114 40 2028 3063 688606700 688605636 0.000000e+00 881
2 TraesCS6B01G416400 chr6B 91.354 347 19 3 506 851 688608222 688607886 7.820000e-127 464
3 TraesCS6B01G416400 chr6B 88.889 360 31 4 863 1221 688607709 688607358 6.130000e-118 435
4 TraesCS6B01G416400 chr6B 88.034 351 31 5 2145 2489 688757216 688756871 4.810000e-109 405
5 TraesCS6B01G416400 chr6B 78.169 568 89 18 2497 3038 688756758 688756200 2.970000e-86 329
6 TraesCS6B01G416400 chr6B 84.150 347 38 9 863 1208 688758554 688758224 1.790000e-83 320
7 TraesCS6B01G416400 chr6B 83.429 175 19 6 1293 1465 688758063 688757897 1.920000e-33 154
8 TraesCS6B01G416400 chr6B 79.444 180 13 14 214 381 688759306 688759139 5.460000e-19 106
9 TraesCS6B01G416400 chr6D 89.541 1243 91 16 1818 3038 453239946 453241171 0.000000e+00 1539
10 TraesCS6B01G416400 chr6D 83.230 966 125 26 1998 2948 453346655 453347598 0.000000e+00 852
11 TraesCS6B01G416400 chr6D 90.244 533 35 8 3241 3762 453241172 453241698 0.000000e+00 680
12 TraesCS6B01G416400 chr6D 91.761 352 22 4 871 1221 453345720 453346065 2.160000e-132 483
13 TraesCS6B01G416400 chr6D 85.595 479 37 17 2017 2485 453187924 453188380 1.300000e-129 473
14 TraesCS6B01G416400 chr6D 90.490 347 22 6 506 851 453345193 453345529 7.870000e-122 448
15 TraesCS6B01G416400 chr6D 89.644 309 11 6 209 505 453344803 453345102 1.360000e-99 374
16 TraesCS6B01G416400 chr6D 83.573 347 37 10 863 1208 453186511 453186838 1.390000e-79 307
17 TraesCS6B01G416400 chr6D 83.918 342 29 13 1292 1629 453346147 453346466 1.800000e-78 303
18 TraesCS6B01G416400 chr6D 92.488 213 10 3 1 213 453238846 453239052 2.330000e-77 300
19 TraesCS6B01G416400 chr6D 79.240 342 26 32 49 388 453185598 453185896 3.150000e-46 196
20 TraesCS6B01G416400 chr6D 88.571 140 5 2 1468 1603 453239788 453239920 4.130000e-35 159
21 TraesCS6B01G416400 chr6D 90.909 110 7 3 3764 3872 453248126 453248233 1.160000e-30 145
22 TraesCS6B01G416400 chr6D 92.941 85 4 1 1308 1392 453239695 453239777 5.420000e-24 122
23 TraesCS6B01G416400 chr6A 83.620 1105 117 38 2000 3060 599716206 599717290 0.000000e+00 979
24 TraesCS6B01G416400 chr6A 81.193 1090 114 39 2017 3038 599260604 599261670 0.000000e+00 793
25 TraesCS6B01G416400 chr6A 83.496 921 81 22 2201 3052 599622007 599622925 0.000000e+00 793
26 TraesCS6B01G416400 chr6A 89.231 520 41 11 3425 3940 599623305 599623813 1.570000e-178 636
27 TraesCS6B01G416400 chr6A 89.802 353 26 4 866 1218 599715305 599715647 1.020000e-120 444
28 TraesCS6B01G416400 chr6A 89.744 351 19 5 506 851 599714793 599715131 2.200000e-117 433
29 TraesCS6B01G416400 chr6A 90.190 316 14 5 1292 1603 599621195 599621497 2.890000e-106 396
30 TraesCS6B01G416400 chr6A 86.895 351 22 10 171 505 599714354 599714696 4.870000e-99 372
31 TraesCS6B01G416400 chr6A 83.425 362 16 11 1295 1629 599715710 599716054 3.020000e-76 296
32 TraesCS6B01G416400 chr6A 90.995 211 13 2 995 1205 599259531 599259735 3.040000e-71 279
33 TraesCS6B01G416400 chr6A 82.500 280 35 8 2367 2634 599215069 599215346 2.400000e-57 233
34 TraesCS6B01G416400 chr6A 88.043 184 17 4 1635 1815 469619425 469619606 3.130000e-51 213
35 TraesCS6B01G416400 chr6A 91.339 127 3 6 265 390 599258722 599258841 2.470000e-37 167
36 TraesCS6B01G416400 chr6A 84.571 175 19 4 1293 1465 599259902 599260070 2.470000e-37 167
37 TraesCS6B01G416400 chr6A 84.906 106 13 3 1323 1427 599197423 599197526 1.960000e-18 104
38 TraesCS6B01G416400 chr2D 91.304 184 14 2 1635 1817 409579188 409579370 2.380000e-62 250
39 TraesCS6B01G416400 chr3B 89.730 185 17 1 1635 1817 52435173 52435357 6.670000e-58 235
40 TraesCS6B01G416400 chr3B 85.938 192 26 1 3549 3739 257099132 257098941 1.880000e-48 204
41 TraesCS6B01G416400 chr5D 90.110 182 15 3 1635 1815 30728815 30728636 2.400000e-57 233
42 TraesCS6B01G416400 chr5D 85.083 181 23 4 3056 3234 549325732 549325910 8.820000e-42 182
43 TraesCS6B01G416400 chr7A 89.247 186 16 3 1635 1817 730830676 730830860 3.100000e-56 230
44 TraesCS6B01G416400 chr3D 89.189 185 17 3 1635 1818 429728322 429728140 1.120000e-55 228
45 TraesCS6B01G416400 chr1A 89.560 182 16 3 1636 1817 298903920 298903742 1.120000e-55 228
46 TraesCS6B01G416400 chr7B 87.500 200 20 5 1620 1815 587901498 587901300 4.020000e-55 226
47 TraesCS6B01G416400 chr1B 87.500 200 15 7 1624 1818 333623792 333623598 5.190000e-54 222
48 TraesCS6B01G416400 chr1D 88.043 184 16 2 3055 3232 480382360 480382177 3.130000e-51 213
49 TraesCS6B01G416400 chr1D 85.484 186 17 4 3056 3233 188461155 188460972 6.810000e-43 185
50 TraesCS6B01G416400 chr4B 81.298 262 32 8 3490 3739 362144232 362143976 3.150000e-46 196
51 TraesCS6B01G416400 chr4D 81.557 244 31 5 3505 3739 294346453 294346215 5.270000e-44 189
52 TraesCS6B01G416400 chr7D 84.302 172 21 3 3067 3233 3639645 3639815 3.190000e-36 163


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G416400 chr6B 688663295 688667287 3992 True 7374.000000 7374 100.000000 1 3993 1 chr6B.!!$R1 3992
1 TraesCS6B01G416400 chr6B 688605636 688608222 2586 True 593.333333 881 87.568000 506 3063 3 chr6B.!!$R2 2557
2 TraesCS6B01G416400 chr6B 688756200 688759306 3106 True 262.800000 405 82.645200 214 3038 5 chr6B.!!$R3 2824
3 TraesCS6B01G416400 chr6D 453238846 453241698 2852 False 560.000000 1539 90.757000 1 3762 5 chr6D.!!$F3 3761
4 TraesCS6B01G416400 chr6D 453344803 453347598 2795 False 492.000000 852 87.808600 209 2948 5 chr6D.!!$F4 2739
5 TraesCS6B01G416400 chr6D 453185598 453188380 2782 False 325.333333 473 82.802667 49 2485 3 chr6D.!!$F2 2436
6 TraesCS6B01G416400 chr6A 599621195 599623813 2618 False 608.333333 793 87.639000 1292 3940 3 chr6A.!!$F5 2648
7 TraesCS6B01G416400 chr6A 599714354 599717290 2936 False 504.800000 979 86.697200 171 3060 5 chr6A.!!$F6 2889
8 TraesCS6B01G416400 chr6A 599258722 599261670 2948 False 351.500000 793 87.024500 265 3038 4 chr6A.!!$F4 2773

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
437 707 0.467804 GAGCCTGGATCACCTCCTTC 59.532 60.0 7.16 0.0 45.21 3.46 F
1011 1630 0.396139 GCATTTCCATGGGGCTGAGA 60.396 55.0 13.02 0.0 0.00 3.27 F
1903 3325 0.453390 GTGGCCTTTCATAGCAGCAC 59.547 55.0 3.32 0.0 0.00 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2025 3546 0.321996 AAGAGAAGTCGAGGGGCAAC 59.678 55.0 0.0 0.0 0.0 4.17 R
2844 4635 1.239296 GCTCAGCAGTTGTGGCATGA 61.239 55.0 0.0 0.0 0.0 3.07 R
3222 5049 0.167908 CGCGTGGCTCAAAAATGCTA 59.832 50.0 0.0 0.0 0.0 3.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 6.408548 GCTGTATGTATGCCCCATAGATATGT 60.409 42.308 5.67 0.00 35.85 2.29
42 43 7.202001 GCTGTATGTATGCCCCATAGATATGTA 60.202 40.741 5.67 0.00 35.85 2.29
43 44 8.616799 TGTATGTATGCCCCATAGATATGTAA 57.383 34.615 5.67 0.00 35.85 2.41
44 45 9.224486 TGTATGTATGCCCCATAGATATGTAAT 57.776 33.333 5.67 0.00 35.85 1.89
96 97 7.159372 ACTAATTAATCGATCGCCTGGTAATT 58.841 34.615 11.09 15.41 0.00 1.40
145 146 4.034975 TGCAAGCAAAATTTAACAAGGCAC 59.965 37.500 0.00 0.00 0.00 5.01
153 154 3.948196 TTTAACAAGGCACACACGTAC 57.052 42.857 0.00 0.00 0.00 3.67
188 189 2.884639 CCGGGAGAGAGAAAGAGAGATC 59.115 54.545 0.00 0.00 0.00 2.75
189 190 3.435026 CCGGGAGAGAGAAAGAGAGATCT 60.435 52.174 0.00 0.00 0.00 2.75
190 191 4.202419 CCGGGAGAGAGAAAGAGAGATCTA 60.202 50.000 0.00 0.00 0.00 1.98
191 192 4.997395 CGGGAGAGAGAAAGAGAGATCTAG 59.003 50.000 0.00 0.00 0.00 2.43
192 193 5.221641 CGGGAGAGAGAAAGAGAGATCTAGA 60.222 48.000 0.00 0.00 0.00 2.43
193 194 6.234177 GGGAGAGAGAAAGAGAGATCTAGAG 58.766 48.000 0.00 0.00 0.00 2.43
194 195 6.043243 GGGAGAGAGAAAGAGAGATCTAGAGA 59.957 46.154 0.00 0.00 0.00 3.10
195 196 7.158021 GGAGAGAGAAAGAGAGATCTAGAGAG 58.842 46.154 0.00 0.00 0.00 3.20
225 226 6.614906 AGAGAGAGAGAGAGAGAGAGAGAAAT 59.385 42.308 0.00 0.00 0.00 2.17
231 232 9.396022 GAGAGAGAGAGAGAGAGAAATTTAGAA 57.604 37.037 0.00 0.00 0.00 2.10
234 235 8.971073 AGAGAGAGAGAGAGAAATTTAGAAAGG 58.029 37.037 0.00 0.00 0.00 3.11
236 237 7.125659 AGAGAGAGAGAGAAATTTAGAAAGGGG 59.874 40.741 0.00 0.00 0.00 4.79
260 261 5.011840 GGAGAGAGATGATGGTGATGATGAA 59.988 44.000 0.00 0.00 0.00 2.57
291 304 4.395625 ACAGCGCTACTATATGTGGAGTA 58.604 43.478 10.99 0.00 30.32 2.59
359 379 2.378507 CGTCGACAGTCGCATATACA 57.621 50.000 18.62 0.00 40.21 2.29
360 380 2.299170 CGTCGACAGTCGCATATACAG 58.701 52.381 18.62 4.10 40.21 2.74
436 706 1.333636 CGAGCCTGGATCACCTCCTT 61.334 60.000 13.04 0.00 45.21 3.36
437 707 0.467804 GAGCCTGGATCACCTCCTTC 59.532 60.000 7.16 0.00 45.21 3.46
438 708 0.985490 AGCCTGGATCACCTCCTTCC 60.985 60.000 0.00 0.00 45.21 3.46
439 709 0.985490 GCCTGGATCACCTCCTTCCT 60.985 60.000 0.00 0.00 45.21 3.36
440 710 1.127343 CCTGGATCACCTCCTTCCTC 58.873 60.000 0.00 0.00 45.21 3.71
565 952 1.681327 CTCCATTGCTGGCTGGCTT 60.681 57.895 2.00 0.00 42.80 4.35
621 1021 4.733725 CGGGGAGGGGAGGGTGAA 62.734 72.222 0.00 0.00 0.00 3.18
622 1022 2.044620 GGGGAGGGGAGGGTGAAT 59.955 66.667 0.00 0.00 0.00 2.57
623 1023 2.386935 GGGGAGGGGAGGGTGAATG 61.387 68.421 0.00 0.00 0.00 2.67
624 1024 2.386935 GGGAGGGGAGGGTGAATGG 61.387 68.421 0.00 0.00 0.00 3.16
625 1025 2.386935 GGAGGGGAGGGTGAATGGG 61.387 68.421 0.00 0.00 0.00 4.00
626 1026 1.619669 GAGGGGAGGGTGAATGGGT 60.620 63.158 0.00 0.00 0.00 4.51
627 1027 1.926426 GAGGGGAGGGTGAATGGGTG 61.926 65.000 0.00 0.00 0.00 4.61
628 1028 1.928567 GGGGAGGGTGAATGGGTGA 60.929 63.158 0.00 0.00 0.00 4.02
673 1073 2.458620 GAGCTACAGGGTAGACAAGGT 58.541 52.381 7.55 0.00 0.00 3.50
708 1108 4.580551 GTATCGTCACCCCGGCCG 62.581 72.222 21.04 21.04 0.00 6.13
825 1230 2.935481 CTTCCTGCCCACCTCCCA 60.935 66.667 0.00 0.00 0.00 4.37
837 1242 1.224592 CCTCCCAATCCCAACCTCG 59.775 63.158 0.00 0.00 0.00 4.63
853 1278 6.049149 CCAACCTCGTTCATACATACTCAAT 58.951 40.000 0.00 0.00 0.00 2.57
854 1279 6.538742 CCAACCTCGTTCATACATACTCAATT 59.461 38.462 0.00 0.00 0.00 2.32
857 1282 7.556844 ACCTCGTTCATACATACTCAATTCTT 58.443 34.615 0.00 0.00 0.00 2.52
858 1283 7.707035 ACCTCGTTCATACATACTCAATTCTTC 59.293 37.037 0.00 0.00 0.00 2.87
859 1284 7.096436 CCTCGTTCATACATACTCAATTCTTCG 60.096 40.741 0.00 0.00 0.00 3.79
861 1286 7.644157 TCGTTCATACATACTCAATTCTTCGAG 59.356 37.037 0.00 0.00 35.30 4.04
868 1481 8.183104 ACATACTCAATTCTTCGAGATCCATA 57.817 34.615 0.00 0.00 33.33 2.74
951 1570 3.397439 GCTGAGCTGAGCAGGGGA 61.397 66.667 21.06 0.00 38.95 4.81
960 1579 0.850100 TGAGCAGGGGAAGGTTTCAA 59.150 50.000 0.00 0.00 0.00 2.69
973 1592 6.943146 GGGAAGGTTTCAAAGAGAAGATAGTT 59.057 38.462 0.00 0.00 37.57 2.24
1011 1630 0.396139 GCATTTCCATGGGGCTGAGA 60.396 55.000 13.02 0.00 0.00 3.27
1029 1648 2.020720 AGAGACATCGAGATGACGCTT 58.979 47.619 18.76 0.00 39.50 4.68
1035 1654 2.184322 GAGATGACGCTTCCGCCA 59.816 61.111 0.00 0.00 38.22 5.69
1086 1705 1.672356 GGTGTGCCACTACCTGCAG 60.672 63.158 6.78 6.78 38.34 4.41
1113 1732 4.043200 GCCAACCAGCACTTCGCC 62.043 66.667 0.00 0.00 44.04 5.54
1114 1733 3.726517 CCAACCAGCACTTCGCCG 61.727 66.667 0.00 0.00 44.04 6.46
1115 1734 3.726517 CAACCAGCACTTCGCCGG 61.727 66.667 0.00 0.00 44.55 6.13
1149 1768 2.677228 GGGACCATGGTGGAGGTG 59.323 66.667 25.52 0.00 40.96 4.00
1195 1814 0.595095 GCTGCCAGGTCAGTTTCTTG 59.405 55.000 11.25 0.00 36.49 3.02
1228 1910 9.904198 TTAGTTACTACAGTTAGTTGGGTTTTT 57.096 29.630 0.00 0.00 39.43 1.94
1254 1936 1.001641 CAAAGGAGGCTGGTGGAGG 60.002 63.158 0.00 0.00 0.00 4.30
1267 1949 3.362040 TGGAGGCCCACATTTTCAG 57.638 52.632 0.00 0.00 37.58 3.02
1271 1953 3.161866 GGAGGCCCACATTTTCAGTTAA 58.838 45.455 0.00 0.00 0.00 2.01
1272 1954 3.193479 GGAGGCCCACATTTTCAGTTAAG 59.807 47.826 0.00 0.00 0.00 1.85
1273 1955 4.079253 GAGGCCCACATTTTCAGTTAAGA 58.921 43.478 0.00 0.00 0.00 2.10
1275 1957 4.898861 AGGCCCACATTTTCAGTTAAGAAA 59.101 37.500 0.00 0.00 35.82 2.52
1332 2237 3.764237 TTGTTGTTAGTCCCTCTCCAC 57.236 47.619 0.00 0.00 0.00 4.02
1333 2238 2.684943 TGTTGTTAGTCCCTCTCCACA 58.315 47.619 0.00 0.00 0.00 4.17
1343 2250 0.901124 CCTCTCCACAGCAAGCTACT 59.099 55.000 0.00 0.00 0.00 2.57
1401 2314 0.600518 TAACTAAGCACGCAACCGCA 60.601 50.000 0.00 0.00 38.40 5.69
1428 2341 3.302129 CTCCAATTGGGGCTTGCC 58.698 61.111 24.29 2.49 37.22 4.52
1429 2342 2.284552 TCCAATTGGGGCTTGCCC 60.285 61.111 24.29 21.74 37.22 5.36
1430 2343 3.773404 CCAATTGGGGCTTGCCCG 61.773 66.667 22.76 9.68 0.00 6.13
1451 2364 5.084055 CCGTCCTCGTTTTTGTTAATTAGC 58.916 41.667 0.00 0.00 35.01 3.09
1499 2880 5.553123 TCAACTTGTCATACCGGTTGTATT 58.447 37.500 15.04 0.00 38.10 1.89
1558 2969 3.975035 GCAAGTACTGTGTTGCTTTTAGC 59.025 43.478 17.55 0.00 44.68 3.09
1559 2970 4.261197 GCAAGTACTGTGTTGCTTTTAGCT 60.261 41.667 17.55 0.00 44.68 3.32
1560 2971 5.733373 GCAAGTACTGTGTTGCTTTTAGCTT 60.733 40.000 17.55 0.00 44.68 3.74
1642 3058 9.832445 TCCTATAATTAATGTCTCCAGTTTGTC 57.168 33.333 0.00 0.00 0.00 3.18
1643 3059 9.838339 CCTATAATTAATGTCTCCAGTTTGTCT 57.162 33.333 0.00 0.00 0.00 3.41
1650 3066 7.440523 AATGTCTCCAGTTTGTCTAATTCAC 57.559 36.000 0.00 0.00 0.00 3.18
1651 3067 5.924356 TGTCTCCAGTTTGTCTAATTCACA 58.076 37.500 0.00 0.00 0.00 3.58
1652 3068 6.533730 TGTCTCCAGTTTGTCTAATTCACAT 58.466 36.000 0.00 0.00 0.00 3.21
1656 3072 8.253810 TCTCCAGTTTGTCTAATTCACATCTAG 58.746 37.037 0.00 0.00 0.00 2.43
1657 3073 8.134202 TCCAGTTTGTCTAATTCACATCTAGA 57.866 34.615 0.00 0.00 0.00 2.43
1684 3100 5.856126 TTTTCACGATGTCACATCTAACC 57.144 39.130 15.89 0.00 0.00 2.85
1686 3102 4.371855 TCACGATGTCACATCTAACCTC 57.628 45.455 15.89 0.00 0.00 3.85
1687 3103 3.130516 TCACGATGTCACATCTAACCTCC 59.869 47.826 15.89 0.00 0.00 4.30
1688 3104 2.431057 ACGATGTCACATCTAACCTCCC 59.569 50.000 15.89 0.00 0.00 4.30
1689 3105 2.430694 CGATGTCACATCTAACCTCCCA 59.569 50.000 15.89 0.00 0.00 4.37
1690 3106 3.070159 CGATGTCACATCTAACCTCCCAT 59.930 47.826 15.89 0.00 0.00 4.00
1691 3107 4.280929 CGATGTCACATCTAACCTCCCATA 59.719 45.833 15.89 0.00 0.00 2.74
1692 3108 5.221441 CGATGTCACATCTAACCTCCCATAA 60.221 44.000 15.89 0.00 0.00 1.90
1693 3109 6.575244 ATGTCACATCTAACCTCCCATAAA 57.425 37.500 0.00 0.00 0.00 1.40
1694 3110 6.575244 TGTCACATCTAACCTCCCATAAAT 57.425 37.500 0.00 0.00 0.00 1.40
1695 3111 7.684317 TGTCACATCTAACCTCCCATAAATA 57.316 36.000 0.00 0.00 0.00 1.40
1696 3112 8.096621 TGTCACATCTAACCTCCCATAAATAA 57.903 34.615 0.00 0.00 0.00 1.40
1697 3113 8.723365 TGTCACATCTAACCTCCCATAAATAAT 58.277 33.333 0.00 0.00 0.00 1.28
1698 3114 9.003658 GTCACATCTAACCTCCCATAAATAATG 57.996 37.037 0.00 0.00 35.15 1.90
1699 3115 7.665559 TCACATCTAACCTCCCATAAATAATGC 59.334 37.037 0.00 0.00 33.92 3.56
1700 3116 7.448161 CACATCTAACCTCCCATAAATAATGCA 59.552 37.037 0.00 0.00 33.92 3.96
1701 3117 7.667219 ACATCTAACCTCCCATAAATAATGCAG 59.333 37.037 0.00 0.00 33.92 4.41
1702 3118 6.003950 TCTAACCTCCCATAAATAATGCAGC 58.996 40.000 0.00 0.00 33.92 5.25
1703 3119 4.183223 ACCTCCCATAAATAATGCAGCA 57.817 40.909 0.00 0.00 33.92 4.41
1704 3120 4.545678 ACCTCCCATAAATAATGCAGCAA 58.454 39.130 0.00 0.00 33.92 3.91
1705 3121 4.342092 ACCTCCCATAAATAATGCAGCAAC 59.658 41.667 0.00 0.00 33.92 4.17
1706 3122 4.341806 CCTCCCATAAATAATGCAGCAACA 59.658 41.667 0.00 0.00 33.92 3.33
1707 3123 5.163426 CCTCCCATAAATAATGCAGCAACAA 60.163 40.000 0.00 0.00 33.92 2.83
1708 3124 5.904941 TCCCATAAATAATGCAGCAACAAG 58.095 37.500 0.00 0.00 33.92 3.16
1709 3125 5.655974 TCCCATAAATAATGCAGCAACAAGA 59.344 36.000 0.00 0.00 33.92 3.02
1710 3126 6.154192 TCCCATAAATAATGCAGCAACAAGAA 59.846 34.615 0.00 0.00 33.92 2.52
1711 3127 6.817641 CCCATAAATAATGCAGCAACAAGAAA 59.182 34.615 0.00 0.00 33.92 2.52
1712 3128 7.201548 CCCATAAATAATGCAGCAACAAGAAAC 60.202 37.037 0.00 0.00 33.92 2.78
1713 3129 7.331440 CCATAAATAATGCAGCAACAAGAAACA 59.669 33.333 0.00 0.00 33.92 2.83
1714 3130 8.710551 CATAAATAATGCAGCAACAAGAAACAA 58.289 29.630 0.00 0.00 0.00 2.83
1715 3131 7.551035 AAATAATGCAGCAACAAGAAACAAA 57.449 28.000 0.00 0.00 0.00 2.83
1716 3132 6.774354 ATAATGCAGCAACAAGAAACAAAG 57.226 33.333 0.00 0.00 0.00 2.77
1717 3133 3.865011 TGCAGCAACAAGAAACAAAGA 57.135 38.095 0.00 0.00 0.00 2.52
1718 3134 4.185467 TGCAGCAACAAGAAACAAAGAA 57.815 36.364 0.00 0.00 0.00 2.52
1719 3135 4.564041 TGCAGCAACAAGAAACAAAGAAA 58.436 34.783 0.00 0.00 0.00 2.52
1720 3136 4.993584 TGCAGCAACAAGAAACAAAGAAAA 59.006 33.333 0.00 0.00 0.00 2.29
1721 3137 5.468072 TGCAGCAACAAGAAACAAAGAAAAA 59.532 32.000 0.00 0.00 0.00 1.94
1759 3175 6.767524 AAAAGACCACAAACATAGTGAACA 57.232 33.333 0.00 0.00 39.30 3.18
1760 3176 6.959639 AAAGACCACAAACATAGTGAACAT 57.040 33.333 0.00 0.00 39.30 2.71
1761 3177 6.560253 AAGACCACAAACATAGTGAACATC 57.440 37.500 0.00 0.00 39.30 3.06
1762 3178 4.690748 AGACCACAAACATAGTGAACATCG 59.309 41.667 0.00 0.00 39.30 3.84
1763 3179 3.751175 ACCACAAACATAGTGAACATCGG 59.249 43.478 0.00 0.00 39.30 4.18
1764 3180 3.126858 CCACAAACATAGTGAACATCGGG 59.873 47.826 0.00 0.00 39.30 5.14
1765 3181 3.751175 CACAAACATAGTGAACATCGGGT 59.249 43.478 0.00 0.00 39.30 5.28
1766 3182 4.215399 CACAAACATAGTGAACATCGGGTT 59.785 41.667 0.00 0.00 44.10 4.11
1767 3183 5.410132 CACAAACATAGTGAACATCGGGTTA 59.590 40.000 0.00 0.00 40.63 2.85
1768 3184 5.642063 ACAAACATAGTGAACATCGGGTTAG 59.358 40.000 0.00 0.00 40.63 2.34
1769 3185 5.670792 AACATAGTGAACATCGGGTTAGA 57.329 39.130 0.00 0.00 40.63 2.10
1770 3186 5.871396 ACATAGTGAACATCGGGTTAGAT 57.129 39.130 0.00 0.00 40.63 1.98
1776 3192 3.659850 CATCGGGTTAGATGCGACA 57.340 52.632 0.00 0.00 41.09 4.35
1777 3193 2.154854 CATCGGGTTAGATGCGACAT 57.845 50.000 0.00 0.00 41.09 3.06
1778 3194 3.297830 CATCGGGTTAGATGCGACATA 57.702 47.619 0.00 0.00 41.09 2.29
1779 3195 3.245797 CATCGGGTTAGATGCGACATAG 58.754 50.000 0.00 0.00 41.09 2.23
1780 3196 2.304092 TCGGGTTAGATGCGACATAGT 58.696 47.619 0.00 0.00 0.00 2.12
1781 3197 2.691526 TCGGGTTAGATGCGACATAGTT 59.308 45.455 0.00 0.00 0.00 2.24
1782 3198 3.884693 TCGGGTTAGATGCGACATAGTTA 59.115 43.478 0.00 0.00 0.00 2.24
1783 3199 4.521639 TCGGGTTAGATGCGACATAGTTAT 59.478 41.667 0.00 0.00 0.00 1.89
1784 3200 4.621460 CGGGTTAGATGCGACATAGTTATG 59.379 45.833 0.00 0.00 39.55 1.90
1811 3227 6.312399 CATCTAGATGTGTCCTAGACAGAC 57.688 45.833 22.42 0.00 43.57 3.51
1812 3228 4.783055 TCTAGATGTGTCCTAGACAGACC 58.217 47.826 0.00 0.00 43.57 3.85
1813 3229 2.741145 AGATGTGTCCTAGACAGACCC 58.259 52.381 0.00 0.00 43.57 4.46
1814 3230 2.313342 AGATGTGTCCTAGACAGACCCT 59.687 50.000 0.00 0.00 43.57 4.34
1815 3231 3.528078 AGATGTGTCCTAGACAGACCCTA 59.472 47.826 0.00 0.00 43.57 3.53
1816 3232 3.820195 TGTGTCCTAGACAGACCCTAA 57.180 47.619 0.00 0.00 43.57 2.69
1836 3252 3.865011 ATGTCTCACTCTGCAGTACTG 57.135 47.619 18.93 18.93 0.00 2.74
1837 3253 1.889170 TGTCTCACTCTGCAGTACTGG 59.111 52.381 23.95 9.92 0.00 4.00
1838 3254 2.163509 GTCTCACTCTGCAGTACTGGA 58.836 52.381 23.95 20.48 0.00 3.86
1889 3310 0.607620 TAATTGGCTTGCAAGTGGCC 59.392 50.000 26.55 22.42 43.89 5.36
1897 3319 2.416431 GCTTGCAAGTGGCCTTTCATAG 60.416 50.000 26.55 0.00 43.89 2.23
1903 3325 0.453390 GTGGCCTTTCATAGCAGCAC 59.547 55.000 3.32 0.00 0.00 4.40
1927 3354 1.304891 TTTCCACCCCTTCCCCTATG 58.695 55.000 0.00 0.00 0.00 2.23
1937 3437 2.771943 CCTTCCCCTATGTGAGCACTTA 59.228 50.000 1.99 0.00 0.00 2.24
1945 3445 6.349300 CCCTATGTGAGCACTTATACAAAGT 58.651 40.000 1.99 0.00 0.00 2.66
2025 3546 6.963049 AAAAGGACTAGTGCATACTTTACG 57.037 37.500 17.34 0.00 38.36 3.18
2100 3625 8.655651 TGATCTAATTATGCACATACGTTTGA 57.344 30.769 13.16 0.00 0.00 2.69
2112 3637 6.090358 GCACATACGTTTGAGTATACACTTGT 59.910 38.462 13.16 0.00 35.72 3.16
2116 3643 3.682858 CGTTTGAGTATACACTTGTGGGG 59.317 47.826 5.50 0.00 34.21 4.96
2117 3644 3.992943 TTGAGTATACACTTGTGGGGG 57.007 47.619 5.50 0.00 34.21 5.40
2141 3668 5.359194 AATCCTAATCAACGTCCACTGAT 57.641 39.130 0.00 0.00 33.66 2.90
2192 3724 2.487086 GCCATGGTGGTATGCAGATGTA 60.487 50.000 14.67 0.00 40.46 2.29
2195 3727 6.795254 CCATGGTGGTATGCAGATGTAGCA 62.795 50.000 2.57 0.00 38.46 3.49
2205 3854 1.326852 CAGATGTAGCAAAGCTGAGCG 59.673 52.381 0.00 0.00 40.10 5.03
2234 3883 2.029290 GTGGTACTTCTTCAGCTTCCGA 60.029 50.000 0.00 0.00 0.00 4.55
2342 3994 1.890894 CCCAAGGTCGTCGTCATCT 59.109 57.895 0.00 0.00 0.00 2.90
2462 4114 1.043116 TCCGCATCGAGAACCCTCAT 61.043 55.000 0.00 0.00 39.39 2.90
2529 4292 9.890352 GTCATCTGAGATTTTAATTGATAAGCC 57.110 33.333 0.00 0.00 0.00 4.35
2644 4408 4.778143 ATGGACGGCAAGGCGGAC 62.778 66.667 20.05 12.24 33.14 4.79
2719 4504 2.543861 CGATCCGGAACAGTATCACCAG 60.544 54.545 9.01 0.00 0.00 4.00
2779 4567 0.698238 ACAATTACCAGCTCCTGCCA 59.302 50.000 0.00 0.00 40.80 4.92
2844 4635 2.798148 GATGTCGACCCCTTTGCCGT 62.798 60.000 14.12 0.00 0.00 5.68
2899 4690 0.403271 ACTTCAGCCAGCAACTCCAT 59.597 50.000 0.00 0.00 0.00 3.41
2935 4726 1.300697 GGCGTGTTTGAGAGACGGT 60.301 57.895 0.00 0.00 44.46 4.83
2937 4728 1.557443 GCGTGTTTGAGAGACGGTGG 61.557 60.000 0.00 0.00 44.46 4.61
2948 4739 2.202932 ACGGTGGCGATGATCAGC 60.203 61.111 0.00 0.00 0.00 4.26
2974 4792 0.610174 TGCAGGAGGAGCACTACAAG 59.390 55.000 0.00 0.00 37.02 3.16
2989 4807 5.637810 GCACTACAAGTACAACAGCTTGATA 59.362 40.000 10.69 0.77 43.29 2.15
3046 4873 0.608130 ATGCCGCTATATTGCTCGGA 59.392 50.000 7.54 0.00 44.23 4.55
3055 4882 5.455849 CGCTATATTGCTCGGACATATACAC 59.544 44.000 7.54 0.00 0.00 2.90
3056 4883 6.330278 GCTATATTGCTCGGACATATACACA 58.670 40.000 1.60 0.00 0.00 3.72
3057 4884 6.473778 GCTATATTGCTCGGACATATACACAG 59.526 42.308 1.60 0.00 0.00 3.66
3058 4885 4.672587 ATTGCTCGGACATATACACAGT 57.327 40.909 0.00 0.00 0.00 3.55
3059 4886 5.784578 ATTGCTCGGACATATACACAGTA 57.215 39.130 0.00 0.00 0.00 2.74
3060 4887 5.585820 TTGCTCGGACATATACACAGTAA 57.414 39.130 0.00 0.00 0.00 2.24
3061 4888 5.784578 TGCTCGGACATATACACAGTAAT 57.215 39.130 0.00 0.00 0.00 1.89
3062 4889 5.528870 TGCTCGGACATATACACAGTAATG 58.471 41.667 0.00 0.00 0.00 1.90
3063 4890 4.386049 GCTCGGACATATACACAGTAATGC 59.614 45.833 0.00 0.00 0.00 3.56
3064 4891 5.773575 CTCGGACATATACACAGTAATGCT 58.226 41.667 0.00 0.00 0.00 3.79
3065 4892 6.569801 GCTCGGACATATACACAGTAATGCTA 60.570 42.308 0.00 0.00 0.00 3.49
3066 4893 6.675026 TCGGACATATACACAGTAATGCTAC 58.325 40.000 0.00 0.00 0.00 3.58
3067 4894 6.263617 TCGGACATATACACAGTAATGCTACA 59.736 38.462 0.00 0.00 0.00 2.74
3068 4895 7.039993 TCGGACATATACACAGTAATGCTACAT 60.040 37.037 0.00 0.00 0.00 2.29
3069 4896 7.062255 CGGACATATACACAGTAATGCTACATG 59.938 40.741 0.00 0.00 0.00 3.21
3070 4897 7.872993 GGACATATACACAGTAATGCTACATGT 59.127 37.037 2.69 2.69 35.19 3.21
3071 4898 9.908152 GACATATACACAGTAATGCTACATGTA 57.092 33.333 5.25 5.25 36.80 2.29
3072 4899 9.692749 ACATATACACAGTAATGCTACATGTAC 57.307 33.333 0.08 0.16 35.96 2.90
3073 4900 9.691362 CATATACACAGTAATGCTACATGTACA 57.309 33.333 0.08 0.00 35.96 2.90
3076 4903 7.129109 ACACAGTAATGCTACATGTACAAAC 57.871 36.000 0.08 8.29 31.37 2.93
3077 4904 6.708502 ACACAGTAATGCTACATGTACAAACA 59.291 34.615 0.08 0.00 40.69 2.83
3093 4920 9.685828 ATGTACAAACATGTTACATGGTTTTAC 57.314 29.630 30.15 30.15 44.79 2.01
3094 4921 8.683615 TGTACAAACATGTTACATGGTTTTACA 58.316 29.630 33.15 33.15 31.57 2.41
3095 4922 9.176181 GTACAAACATGTTACATGGTTTTACAG 57.824 33.333 31.07 20.95 31.57 2.74
3096 4923 8.001881 ACAAACATGTTACATGGTTTTACAGA 57.998 30.769 24.04 0.00 31.57 3.41
3097 4924 8.470805 ACAAACATGTTACATGGTTTTACAGAA 58.529 29.630 24.04 0.00 31.57 3.02
3098 4925 9.474920 CAAACATGTTACATGGTTTTACAGAAT 57.525 29.630 24.04 0.00 31.57 2.40
3099 4926 9.474920 AAACATGTTACATGGTTTTACAGAATG 57.525 29.630 26.30 1.18 34.04 2.67
3100 4927 7.601856 ACATGTTACATGGTTTTACAGAATGG 58.398 34.615 26.30 0.00 43.62 3.16
3101 4928 6.582677 TGTTACATGGTTTTACAGAATGGG 57.417 37.500 0.00 0.00 43.62 4.00
3102 4929 6.071984 TGTTACATGGTTTTACAGAATGGGT 58.928 36.000 0.00 0.00 43.62 4.51
3103 4930 6.551601 TGTTACATGGTTTTACAGAATGGGTT 59.448 34.615 0.00 0.00 43.62 4.11
3104 4931 7.724506 TGTTACATGGTTTTACAGAATGGGTTA 59.275 33.333 0.00 0.00 43.62 2.85
3105 4932 8.578151 GTTACATGGTTTTACAGAATGGGTTAA 58.422 33.333 0.00 0.00 43.62 2.01
3106 4933 7.790782 ACATGGTTTTACAGAATGGGTTAAT 57.209 32.000 0.00 0.00 43.62 1.40
3107 4934 8.201242 ACATGGTTTTACAGAATGGGTTAATT 57.799 30.769 0.00 0.00 43.62 1.40
3108 4935 8.655901 ACATGGTTTTACAGAATGGGTTAATTT 58.344 29.630 0.00 0.00 43.62 1.82
3109 4936 8.934825 CATGGTTTTACAGAATGGGTTAATTTG 58.065 33.333 0.00 0.00 43.62 2.32
3110 4937 8.251383 TGGTTTTACAGAATGGGTTAATTTGA 57.749 30.769 0.00 0.00 43.62 2.69
3111 4938 8.875168 TGGTTTTACAGAATGGGTTAATTTGAT 58.125 29.630 0.00 0.00 43.62 2.57
3112 4939 9.719355 GGTTTTACAGAATGGGTTAATTTGATT 57.281 29.630 0.00 0.00 43.62 2.57
3114 4941 9.717942 TTTTACAGAATGGGTTAATTTGATTGG 57.282 29.630 0.00 0.00 43.62 3.16
3115 4942 6.933514 ACAGAATGGGTTAATTTGATTGGT 57.066 33.333 0.00 0.00 43.62 3.67
3116 4943 6.935167 ACAGAATGGGTTAATTTGATTGGTC 58.065 36.000 0.00 0.00 43.62 4.02
3117 4944 6.496565 ACAGAATGGGTTAATTTGATTGGTCA 59.503 34.615 0.00 0.00 43.62 4.02
3118 4945 7.016072 ACAGAATGGGTTAATTTGATTGGTCAA 59.984 33.333 0.00 0.00 43.62 3.18
3119 4946 8.042515 CAGAATGGGTTAATTTGATTGGTCAAT 58.957 33.333 0.00 0.00 43.49 2.57
3120 4947 8.605065 AGAATGGGTTAATTTGATTGGTCAATT 58.395 29.630 0.00 0.00 43.49 2.32
3121 4948 8.564509 AATGGGTTAATTTGATTGGTCAATTG 57.435 30.769 0.00 0.00 43.49 2.32
3122 4949 6.471146 TGGGTTAATTTGATTGGTCAATTGG 58.529 36.000 5.42 0.00 43.49 3.16
3123 4950 6.043706 TGGGTTAATTTGATTGGTCAATTGGT 59.956 34.615 5.42 0.00 43.49 3.67
3124 4951 6.371271 GGGTTAATTTGATTGGTCAATTGGTG 59.629 38.462 5.42 0.00 43.49 4.17
3125 4952 7.158021 GGTTAATTTGATTGGTCAATTGGTGA 58.842 34.615 5.42 0.00 43.49 4.02
3126 4953 7.331687 GGTTAATTTGATTGGTCAATTGGTGAG 59.668 37.037 5.42 0.00 43.49 3.51
3127 4954 4.870123 TTTGATTGGTCAATTGGTGAGG 57.130 40.909 5.42 0.00 43.49 3.86
3128 4955 3.805066 TGATTGGTCAATTGGTGAGGA 57.195 42.857 5.42 0.00 36.74 3.71
3129 4956 4.111255 TGATTGGTCAATTGGTGAGGAA 57.889 40.909 5.42 0.00 36.74 3.36
3130 4957 4.081406 TGATTGGTCAATTGGTGAGGAAG 58.919 43.478 5.42 0.00 36.74 3.46
3131 4958 3.874383 TTGGTCAATTGGTGAGGAAGA 57.126 42.857 5.42 0.00 36.74 2.87
3132 4959 3.140325 TGGTCAATTGGTGAGGAAGAC 57.860 47.619 5.42 0.00 36.74 3.01
3133 4960 2.076863 GGTCAATTGGTGAGGAAGACG 58.923 52.381 5.42 0.00 36.74 4.18
3134 4961 2.076863 GTCAATTGGTGAGGAAGACGG 58.923 52.381 5.42 0.00 36.74 4.79
3135 4962 0.804989 CAATTGGTGAGGAAGACGGC 59.195 55.000 0.00 0.00 0.00 5.68
3136 4963 0.322546 AATTGGTGAGGAAGACGGCC 60.323 55.000 0.00 0.00 0.00 6.13
3137 4964 2.198304 ATTGGTGAGGAAGACGGCCC 62.198 60.000 0.00 0.00 0.00 5.80
3138 4965 3.319198 GGTGAGGAAGACGGCCCA 61.319 66.667 0.00 0.00 0.00 5.36
3139 4966 2.747686 GTGAGGAAGACGGCCCAA 59.252 61.111 0.00 0.00 0.00 4.12
3140 4967 1.671379 GTGAGGAAGACGGCCCAAC 60.671 63.158 0.00 0.00 0.00 3.77
3141 4968 2.046217 GAGGAAGACGGCCCAACC 60.046 66.667 0.00 0.00 0.00 3.77
3142 4969 3.623703 GAGGAAGACGGCCCAACCC 62.624 68.421 0.00 0.00 33.26 4.11
3143 4970 4.735358 GGAAGACGGCCCAACCCC 62.735 72.222 0.00 0.00 33.26 4.95
3144 4971 3.647771 GAAGACGGCCCAACCCCT 61.648 66.667 0.00 0.00 33.26 4.79
3145 4972 3.920093 GAAGACGGCCCAACCCCTG 62.920 68.421 0.00 0.00 33.26 4.45
3146 4973 4.974438 AGACGGCCCAACCCCTGA 62.974 66.667 0.00 0.00 33.26 3.86
3147 4974 3.961414 GACGGCCCAACCCCTGAA 61.961 66.667 0.00 0.00 33.26 3.02
3148 4975 3.501040 GACGGCCCAACCCCTGAAA 62.501 63.158 0.00 0.00 33.26 2.69
3149 4976 2.203567 CGGCCCAACCCCTGAAAA 60.204 61.111 0.00 0.00 33.26 2.29
3150 4977 1.609210 CGGCCCAACCCCTGAAAAT 60.609 57.895 0.00 0.00 33.26 1.82
3151 4978 1.604147 CGGCCCAACCCCTGAAAATC 61.604 60.000 0.00 0.00 33.26 2.17
3152 4979 0.544120 GGCCCAACCCCTGAAAATCA 60.544 55.000 0.00 0.00 0.00 2.57
3153 4980 0.897621 GCCCAACCCCTGAAAATCAG 59.102 55.000 0.32 0.32 43.91 2.90
3157 4984 2.450476 CAACCCCTGAAAATCAGAGGG 58.550 52.381 22.14 22.14 45.55 4.30
3158 4985 1.002857 ACCCCTGAAAATCAGAGGGG 58.997 55.000 25.01 19.13 45.55 4.79
3159 4986 3.092443 ACCCCTGAAAATCAGAGGGGC 62.092 57.143 25.01 0.00 45.55 5.80
3164 4991 3.243359 TGAAAATCAGAGGGGCAAAGT 57.757 42.857 0.00 0.00 0.00 2.66
3165 4992 3.575805 TGAAAATCAGAGGGGCAAAGTT 58.424 40.909 0.00 0.00 0.00 2.66
3166 4993 3.966665 TGAAAATCAGAGGGGCAAAGTTT 59.033 39.130 0.00 0.00 0.00 2.66
3167 4994 4.202243 TGAAAATCAGAGGGGCAAAGTTTG 60.202 41.667 11.41 11.41 0.00 2.93
3168 4995 2.683211 ATCAGAGGGGCAAAGTTTGT 57.317 45.000 16.70 0.00 0.00 2.83
3169 4996 1.691196 TCAGAGGGGCAAAGTTTGTG 58.309 50.000 16.70 6.41 0.00 3.33
3170 4997 1.214175 TCAGAGGGGCAAAGTTTGTGA 59.786 47.619 16.70 8.56 0.00 3.58
3171 4998 2.158475 TCAGAGGGGCAAAGTTTGTGAT 60.158 45.455 16.70 1.48 0.00 3.06
3172 4999 2.629617 CAGAGGGGCAAAGTTTGTGATT 59.370 45.455 16.70 1.56 0.00 2.57
3173 5000 2.629617 AGAGGGGCAAAGTTTGTGATTG 59.370 45.455 16.70 0.00 0.00 2.67
3174 5001 2.627699 GAGGGGCAAAGTTTGTGATTGA 59.372 45.455 16.70 0.00 0.00 2.57
3175 5002 3.242011 AGGGGCAAAGTTTGTGATTGAT 58.758 40.909 16.70 0.00 0.00 2.57
3176 5003 3.647590 AGGGGCAAAGTTTGTGATTGATT 59.352 39.130 16.70 0.00 0.00 2.57
3177 5004 4.837860 AGGGGCAAAGTTTGTGATTGATTA 59.162 37.500 16.70 0.00 0.00 1.75
3178 5005 5.484998 AGGGGCAAAGTTTGTGATTGATTAT 59.515 36.000 16.70 0.00 0.00 1.28
3179 5006 6.013466 AGGGGCAAAGTTTGTGATTGATTATT 60.013 34.615 16.70 0.00 0.00 1.40
3180 5007 7.180051 AGGGGCAAAGTTTGTGATTGATTATTA 59.820 33.333 16.70 0.00 0.00 0.98
3181 5008 7.492344 GGGGCAAAGTTTGTGATTGATTATTAG 59.508 37.037 16.70 0.00 0.00 1.73
3182 5009 8.250332 GGGCAAAGTTTGTGATTGATTATTAGA 58.750 33.333 16.70 0.00 0.00 2.10
3183 5010 9.807649 GGCAAAGTTTGTGATTGATTATTAGAT 57.192 29.630 16.70 0.00 0.00 1.98
3193 5020 9.890352 GTGATTGATTATTAGATGAAAAGAGCC 57.110 33.333 0.00 0.00 0.00 4.70
3194 5021 9.857656 TGATTGATTATTAGATGAAAAGAGCCT 57.142 29.630 0.00 0.00 0.00 4.58
3196 5023 9.638176 ATTGATTATTAGATGAAAAGAGCCTGT 57.362 29.630 0.00 0.00 0.00 4.00
3203 5030 8.862325 TTAGATGAAAAGAGCCTGTAAAATCA 57.138 30.769 0.00 0.00 0.00 2.57
3204 5031 7.951347 AGATGAAAAGAGCCTGTAAAATCAT 57.049 32.000 0.00 0.00 0.00 2.45
3205 5032 7.769220 AGATGAAAAGAGCCTGTAAAATCATG 58.231 34.615 0.00 0.00 0.00 3.07
3206 5033 6.899393 TGAAAAGAGCCTGTAAAATCATGT 57.101 33.333 0.00 0.00 0.00 3.21
3207 5034 7.994425 TGAAAAGAGCCTGTAAAATCATGTA 57.006 32.000 0.00 0.00 0.00 2.29
3208 5035 8.579850 TGAAAAGAGCCTGTAAAATCATGTAT 57.420 30.769 0.00 0.00 0.00 2.29
3209 5036 9.023962 TGAAAAGAGCCTGTAAAATCATGTATT 57.976 29.630 0.00 0.00 0.00 1.89
3210 5037 9.860898 GAAAAGAGCCTGTAAAATCATGTATTT 57.139 29.630 0.00 0.00 39.56 1.40
3211 5038 9.643693 AAAAGAGCCTGTAAAATCATGTATTTG 57.356 29.630 8.19 0.00 37.85 2.32
3212 5039 7.944729 AGAGCCTGTAAAATCATGTATTTGT 57.055 32.000 8.19 2.10 37.85 2.83
3213 5040 8.353423 AGAGCCTGTAAAATCATGTATTTGTT 57.647 30.769 8.19 0.00 37.85 2.83
3214 5041 8.806146 AGAGCCTGTAAAATCATGTATTTGTTT 58.194 29.630 8.19 0.00 37.85 2.83
3215 5042 8.761575 AGCCTGTAAAATCATGTATTTGTTTG 57.238 30.769 8.19 0.00 37.85 2.93
3216 5043 8.367156 AGCCTGTAAAATCATGTATTTGTTTGT 58.633 29.630 8.19 0.00 37.85 2.83
3217 5044 9.632807 GCCTGTAAAATCATGTATTTGTTTGTA 57.367 29.630 8.19 0.00 37.85 2.41
3235 5062 8.071122 TGTTTGTATGTTTAGCATTTTTGAGC 57.929 30.769 0.00 0.00 38.94 4.26
3236 5063 7.170658 TGTTTGTATGTTTAGCATTTTTGAGCC 59.829 33.333 0.00 0.00 38.94 4.70
3237 5064 6.338214 TGTATGTTTAGCATTTTTGAGCCA 57.662 33.333 0.00 0.00 38.94 4.75
3238 5065 6.155827 TGTATGTTTAGCATTTTTGAGCCAC 58.844 36.000 0.00 0.00 38.94 5.01
3239 5066 3.637432 TGTTTAGCATTTTTGAGCCACG 58.363 40.909 0.00 0.00 0.00 4.94
3244 5071 1.486439 CATTTTTGAGCCACGCGTTT 58.514 45.000 10.22 0.00 0.00 3.60
3289 5116 3.378112 ACTCGGGTGCAACAAATCATATG 59.622 43.478 3.06 0.00 39.98 1.78
3290 5117 3.615155 TCGGGTGCAACAAATCATATGA 58.385 40.909 8.10 8.10 39.98 2.15
3293 5120 3.181476 GGGTGCAACAAATCATATGACCC 60.181 47.826 7.78 7.61 39.98 4.46
3299 5126 2.154462 CAAATCATATGACCCGGGAGC 58.846 52.381 32.02 19.53 0.00 4.70
3332 5159 0.877071 CACTCACGTACCGGTACACT 59.123 55.000 36.87 22.43 35.87 3.55
3356 5185 2.677003 CGATGACGCACACCCAACC 61.677 63.158 0.00 0.00 0.00 3.77
3375 5204 3.022607 CCGGACCGGTATAGACATTTC 57.977 52.381 25.54 0.00 42.73 2.17
3377 5206 3.069158 CCGGACCGGTATAGACATTTCTT 59.931 47.826 25.54 0.00 42.73 2.52
3378 5207 4.279169 CCGGACCGGTATAGACATTTCTTA 59.721 45.833 25.54 0.00 42.73 2.10
3379 5208 5.218139 CGGACCGGTATAGACATTTCTTAC 58.782 45.833 7.34 0.00 32.75 2.34
3394 5223 4.994907 TTCTTACTACATAGGAAGCGCA 57.005 40.909 11.47 0.00 42.71 6.09
3410 5241 1.394917 GCGCAACTGTTCATACCTCAG 59.605 52.381 0.30 0.00 35.60 3.35
3510 5603 3.899980 ACTAGTACCCCGTCCCAATTATC 59.100 47.826 0.00 0.00 0.00 1.75
3518 5611 4.444536 CCCGTCCCAATTATCGAAGTTAA 58.555 43.478 0.00 0.00 0.00 2.01
3547 5640 7.277760 GCTTGTCCAAAGTCAAACTTGTTTAAT 59.722 33.333 0.00 0.00 38.66 1.40
3698 5800 8.925161 TCAAAGATAAACAAGTTTGACTTTGG 57.075 30.769 30.22 21.92 44.57 3.28
3748 5850 6.069847 TGGAACGAAGGGAGTAATTAGGATTT 60.070 38.462 0.00 0.00 0.00 2.17
3781 5883 5.401531 TTCTACTAAGGATCAAGCAACGT 57.598 39.130 0.00 0.00 0.00 3.99
3801 5903 7.330208 GCAACGTAACTAATTCTTCTACAAGGA 59.670 37.037 0.00 0.00 0.00 3.36
3835 5937 1.216990 CCTCTACCCAATCAAGCCCT 58.783 55.000 0.00 0.00 0.00 5.19
3836 5938 1.566231 CCTCTACCCAATCAAGCCCTT 59.434 52.381 0.00 0.00 0.00 3.95
3839 5941 2.378547 TCTACCCAATCAAGCCCTTGTT 59.621 45.455 7.80 0.00 41.16 2.83
3848 5950 4.853924 TCAAGCCCTTGTTGATTTCTTC 57.146 40.909 7.80 0.00 41.16 2.87
3869 5971 6.039829 TCTTCAGCTAAGATGACATACGATGT 59.960 38.462 0.00 0.00 41.96 3.06
3882 5984 2.768253 ACGATGTCATCAAGGCTTCA 57.232 45.000 13.22 0.00 0.00 3.02
3885 5987 2.094894 CGATGTCATCAAGGCTTCACAC 59.905 50.000 13.22 0.00 0.00 3.82
3905 6007 6.595326 TCACACTAATCTCAATAAAGTGGCAG 59.405 38.462 5.83 0.00 41.43 4.85
3909 6011 5.927281 AATCTCAATAAAGTGGCAGCATT 57.073 34.783 0.00 0.00 0.00 3.56
3940 6042 7.041721 GGTCATGCATCCATCGATATAGTTTA 58.958 38.462 0.00 0.00 0.00 2.01
3941 6043 7.549134 GGTCATGCATCCATCGATATAGTTTAA 59.451 37.037 0.00 0.00 0.00 1.52
3942 6044 8.935844 GTCATGCATCCATCGATATAGTTTAAA 58.064 33.333 0.00 0.00 0.00 1.52
3943 6045 9.500785 TCATGCATCCATCGATATAGTTTAAAA 57.499 29.630 0.00 0.00 0.00 1.52
3944 6046 9.546909 CATGCATCCATCGATATAGTTTAAAAC 57.453 33.333 0.00 0.00 0.00 2.43
3945 6047 8.669946 TGCATCCATCGATATAGTTTAAAACA 57.330 30.769 0.00 0.00 0.00 2.83
3946 6048 9.114952 TGCATCCATCGATATAGTTTAAAACAA 57.885 29.630 0.00 0.00 0.00 2.83
3947 6049 9.599322 GCATCCATCGATATAGTTTAAAACAAG 57.401 33.333 0.00 0.00 0.00 3.16
3948 6050 9.599322 CATCCATCGATATAGTTTAAAACAAGC 57.401 33.333 0.00 0.00 0.00 4.01
3949 6051 8.725405 TCCATCGATATAGTTTAAAACAAGCA 57.275 30.769 0.00 0.00 0.00 3.91
3950 6052 9.168451 TCCATCGATATAGTTTAAAACAAGCAA 57.832 29.630 0.00 0.00 0.00 3.91
3951 6053 9.221775 CCATCGATATAGTTTAAAACAAGCAAC 57.778 33.333 0.00 0.00 0.00 4.17
3952 6054 8.933955 CATCGATATAGTTTAAAACAAGCAACG 58.066 33.333 0.00 0.00 0.00 4.10
3953 6055 7.457868 TCGATATAGTTTAAAACAAGCAACGG 58.542 34.615 0.00 0.00 0.00 4.44
3954 6056 7.331440 TCGATATAGTTTAAAACAAGCAACGGA 59.669 33.333 0.00 0.00 0.00 4.69
3955 6057 7.634817 CGATATAGTTTAAAACAAGCAACGGAG 59.365 37.037 0.00 0.00 0.00 4.63
3956 6058 4.301637 AGTTTAAAACAAGCAACGGAGG 57.698 40.909 0.00 0.00 0.00 4.30
3957 6059 3.949113 AGTTTAAAACAAGCAACGGAGGA 59.051 39.130 0.00 0.00 0.00 3.71
3958 6060 4.036380 AGTTTAAAACAAGCAACGGAGGAG 59.964 41.667 0.00 0.00 0.00 3.69
3959 6061 2.341846 AAAACAAGCAACGGAGGAGA 57.658 45.000 0.00 0.00 0.00 3.71
3960 6062 1.594331 AAACAAGCAACGGAGGAGAC 58.406 50.000 0.00 0.00 0.00 3.36
3961 6063 0.250338 AACAAGCAACGGAGGAGACC 60.250 55.000 0.00 0.00 0.00 3.85
3962 6064 1.371183 CAAGCAACGGAGGAGACCA 59.629 57.895 0.00 0.00 0.00 4.02
3963 6065 0.250295 CAAGCAACGGAGGAGACCAA 60.250 55.000 0.00 0.00 0.00 3.67
3964 6066 0.472471 AAGCAACGGAGGAGACCAAA 59.528 50.000 0.00 0.00 0.00 3.28
3965 6067 0.472471 AGCAACGGAGGAGACCAAAA 59.528 50.000 0.00 0.00 0.00 2.44
3966 6068 1.133915 AGCAACGGAGGAGACCAAAAA 60.134 47.619 0.00 0.00 0.00 1.94
3967 6069 1.886542 GCAACGGAGGAGACCAAAAAT 59.113 47.619 0.00 0.00 0.00 1.82
3968 6070 3.078837 GCAACGGAGGAGACCAAAAATA 58.921 45.455 0.00 0.00 0.00 1.40
3969 6071 3.119955 GCAACGGAGGAGACCAAAAATAC 60.120 47.826 0.00 0.00 0.00 1.89
3970 6072 4.324267 CAACGGAGGAGACCAAAAATACT 58.676 43.478 0.00 0.00 0.00 2.12
3971 6073 5.484715 CAACGGAGGAGACCAAAAATACTA 58.515 41.667 0.00 0.00 0.00 1.82
3972 6074 5.750352 ACGGAGGAGACCAAAAATACTAA 57.250 39.130 0.00 0.00 0.00 2.24
3973 6075 6.309389 ACGGAGGAGACCAAAAATACTAAT 57.691 37.500 0.00 0.00 0.00 1.73
3974 6076 6.346896 ACGGAGGAGACCAAAAATACTAATC 58.653 40.000 0.00 0.00 0.00 1.75
3975 6077 6.070424 ACGGAGGAGACCAAAAATACTAATCA 60.070 38.462 0.00 0.00 0.00 2.57
3976 6078 6.821665 CGGAGGAGACCAAAAATACTAATCAA 59.178 38.462 0.00 0.00 0.00 2.57
3977 6079 7.499232 CGGAGGAGACCAAAAATACTAATCAAT 59.501 37.037 0.00 0.00 0.00 2.57
3978 6080 8.624776 GGAGGAGACCAAAAATACTAATCAATG 58.375 37.037 0.00 0.00 0.00 2.82
3979 6081 8.525290 AGGAGACCAAAAATACTAATCAATGG 57.475 34.615 0.00 0.00 0.00 3.16
3980 6082 7.068716 AGGAGACCAAAAATACTAATCAATGGC 59.931 37.037 0.00 0.00 0.00 4.40
3981 6083 6.795399 AGACCAAAAATACTAATCAATGGCG 58.205 36.000 0.00 0.00 0.00 5.69
3982 6084 5.901552 ACCAAAAATACTAATCAATGGCGG 58.098 37.500 0.00 0.00 0.00 6.13
3983 6085 5.654650 ACCAAAAATACTAATCAATGGCGGA 59.345 36.000 0.00 0.00 0.00 5.54
3984 6086 6.153680 ACCAAAAATACTAATCAATGGCGGAA 59.846 34.615 0.00 0.00 0.00 4.30
3985 6087 7.147742 ACCAAAAATACTAATCAATGGCGGAAT 60.148 33.333 0.00 0.00 0.00 3.01
3986 6088 7.169645 CCAAAAATACTAATCAATGGCGGAATG 59.830 37.037 0.00 0.00 0.00 2.67
3987 6089 7.581213 AAAATACTAATCAATGGCGGAATGA 57.419 32.000 0.00 0.00 0.00 2.57
3988 6090 7.765695 AAATACTAATCAATGGCGGAATGAT 57.234 32.000 0.00 0.00 35.39 2.45
3989 6091 6.748333 ATACTAATCAATGGCGGAATGATG 57.252 37.500 0.00 0.00 34.21 3.07
3990 6092 2.806608 AATCAATGGCGGAATGATGC 57.193 45.000 0.00 0.00 34.21 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
96 97 4.316205 AGTCAATGTGTTCGTACAGACA 57.684 40.909 12.53 2.41 34.24 3.41
145 146 3.422603 GCCTTTATGTGTTCGTACGTGTG 60.423 47.826 16.05 0.00 0.00 3.82
153 154 0.391927 TCCCGGCCTTTATGTGTTCG 60.392 55.000 0.00 0.00 0.00 3.95
188 189 6.303054 TCTCTCTCTCTCTCTCTCTCTCTAG 58.697 48.000 0.00 0.00 0.00 2.43
189 190 6.101881 TCTCTCTCTCTCTCTCTCTCTCTCTA 59.898 46.154 0.00 0.00 0.00 2.43
190 191 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
191 192 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
192 193 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
193 194 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
194 195 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
195 196 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
225 226 4.960332 TCATCTCTCTCCCCCTTTCTAAA 58.040 43.478 0.00 0.00 0.00 1.85
231 232 1.296523 ACCATCATCTCTCTCCCCCTT 59.703 52.381 0.00 0.00 0.00 3.95
234 235 2.094100 TCACCATCATCTCTCTCCCC 57.906 55.000 0.00 0.00 0.00 4.81
236 237 4.527427 TCATCATCACCATCATCTCTCTCC 59.473 45.833 0.00 0.00 0.00 3.71
260 261 2.698855 AGTAGCGCTGTTCATCCATT 57.301 45.000 22.90 0.00 0.00 3.16
291 304 8.798859 GGCTAATTATTAGTCCATCATCACAT 57.201 34.615 12.82 0.00 35.66 3.21
350 370 3.422214 CGCAGCAACATACTGTATATGCG 60.422 47.826 21.84 20.51 43.49 4.73
356 376 3.579335 TGTACGCAGCAACATACTGTA 57.421 42.857 0.00 0.00 37.47 2.74
357 377 2.448926 TGTACGCAGCAACATACTGT 57.551 45.000 0.00 0.00 37.47 3.55
358 378 2.929398 TGATGTACGCAGCAACATACTG 59.071 45.455 9.77 0.00 38.15 2.74
359 379 2.930040 GTGATGTACGCAGCAACATACT 59.070 45.455 9.77 0.00 43.08 2.12
360 380 2.930040 AGTGATGTACGCAGCAACATAC 59.070 45.455 9.77 8.80 43.08 2.39
436 706 1.550374 AGAAGAGGGGAGGGGAGGA 60.550 63.158 0.00 0.00 0.00 3.71
437 707 1.074850 GAGAAGAGGGGAGGGGAGG 60.075 68.421 0.00 0.00 0.00 4.30
438 708 1.074850 GGAGAAGAGGGGAGGGGAG 60.075 68.421 0.00 0.00 0.00 4.30
439 709 2.647949 GGGAGAAGAGGGGAGGGGA 61.648 68.421 0.00 0.00 0.00 4.81
440 710 2.040359 GGGAGAAGAGGGGAGGGG 60.040 72.222 0.00 0.00 0.00 4.79
525 909 5.103000 AGTAAGCACTCTACGCATTAACTG 58.897 41.667 0.00 0.00 0.00 3.16
542 929 0.737219 CAGCCAGCAATGGAGTAAGC 59.263 55.000 0.00 0.00 0.00 3.09
621 1021 2.746375 GGCGGTCTCCATCACCCAT 61.746 63.158 0.00 0.00 0.00 4.00
622 1022 3.399181 GGCGGTCTCCATCACCCA 61.399 66.667 0.00 0.00 0.00 4.51
623 1023 4.530857 CGGCGGTCTCCATCACCC 62.531 72.222 0.00 0.00 0.00 4.61
624 1024 4.530857 CCGGCGGTCTCCATCACC 62.531 72.222 19.97 0.00 0.00 4.02
708 1108 1.200020 GTGTATGGGAGCAAGCAACAC 59.800 52.381 0.00 0.00 0.00 3.32
825 1230 3.992943 TGTATGAACGAGGTTGGGATT 57.007 42.857 0.00 0.00 0.00 3.01
837 1242 8.858003 TCTCGAAGAATTGAGTATGTATGAAC 57.142 34.615 0.00 0.00 34.09 3.18
861 1286 7.322664 GTTTGGATGAGAGATCTCTATGGATC 58.677 42.308 25.18 20.35 43.25 3.36
868 1481 3.729108 TGGGTTTGGATGAGAGATCTCT 58.271 45.455 25.39 25.39 43.25 3.10
884 1500 3.620427 TTGCGATGTGTACTATGGGTT 57.380 42.857 0.00 0.00 0.00 4.11
925 1543 1.662517 CTCAGCTCAGCTCGACTCTA 58.337 55.000 0.00 0.00 36.40 2.43
951 1570 7.993183 TGTGAACTATCTTCTCTTTGAAACCTT 59.007 33.333 0.00 0.00 33.79 3.50
960 1579 9.866655 ATCTCTATCTGTGAACTATCTTCTCTT 57.133 33.333 0.00 0.00 0.00 2.85
973 1592 9.935241 GGAAATGCTTATTATCTCTATCTGTGA 57.065 33.333 0.00 0.00 0.00 3.58
1011 1630 1.066303 GGAAGCGTCATCTCGATGTCT 59.934 52.381 1.14 1.39 39.72 3.41
1055 1674 2.597805 ACACCAGCTCCTCGTCGT 60.598 61.111 0.00 0.00 0.00 4.34
1149 1768 1.517257 CTCGTGGACGTGCAGATCC 60.517 63.158 11.09 8.94 40.80 3.36
1228 1910 2.224769 ACCAGCCTCCTTTGATCGAAAA 60.225 45.455 0.00 0.00 0.00 2.29
1229 1911 1.351017 ACCAGCCTCCTTTGATCGAAA 59.649 47.619 0.00 0.00 0.00 3.46
1233 1915 0.620556 TCCACCAGCCTCCTTTGATC 59.379 55.000 0.00 0.00 0.00 2.92
1234 1916 0.622665 CTCCACCAGCCTCCTTTGAT 59.377 55.000 0.00 0.00 0.00 2.57
1237 1919 2.911926 GCCTCCACCAGCCTCCTTT 61.912 63.158 0.00 0.00 0.00 3.11
1238 1920 3.334054 GCCTCCACCAGCCTCCTT 61.334 66.667 0.00 0.00 0.00 3.36
1276 1958 9.823647 AGATTGATCGACATGTAAAAACTCTAT 57.176 29.630 0.00 0.00 0.00 1.98
1278 1960 7.009631 CGAGATTGATCGACATGTAAAAACTCT 59.990 37.037 0.00 0.00 45.56 3.24
1279 1961 7.009265 TCGAGATTGATCGACATGTAAAAACTC 59.991 37.037 0.00 2.58 46.20 3.01
1312 2217 3.042682 TGTGGAGAGGGACTAACAACAA 58.957 45.455 0.00 0.00 41.55 2.83
1332 2237 6.734104 AATTAAGAGACAAGTAGCTTGCTG 57.266 37.500 5.26 0.00 44.43 4.41
1333 2238 9.454859 AATTAATTAAGAGACAAGTAGCTTGCT 57.545 29.630 8.59 0.00 44.43 3.91
1401 2314 3.117926 GCCCCAATTGGAGCCAATAAAAT 60.118 43.478 26.60 0.00 44.86 1.82
1427 2340 4.492791 AATTAACAAAAACGAGGACGGG 57.507 40.909 0.00 0.00 44.46 5.28
1428 2341 5.084055 GCTAATTAACAAAAACGAGGACGG 58.916 41.667 0.00 0.00 44.46 4.79
1429 2342 4.779523 CGCTAATTAACAAAAACGAGGACG 59.220 41.667 0.00 0.00 45.75 4.79
1430 2343 4.552276 GCGCTAATTAACAAAAACGAGGAC 59.448 41.667 0.00 0.00 0.00 3.85
1499 2880 6.381133 AGGATCGAGATGGTATATGCATGTAA 59.619 38.462 10.16 0.00 0.00 2.41
1554 2965 6.102897 AGAGAAACTTGTGCTAGAAGCTAA 57.897 37.500 0.00 0.00 42.97 3.09
1555 2966 5.730296 AGAGAAACTTGTGCTAGAAGCTA 57.270 39.130 0.00 0.00 42.97 3.32
1556 2967 4.615588 AGAGAAACTTGTGCTAGAAGCT 57.384 40.909 0.00 0.00 42.97 3.74
1557 2968 6.647067 TCTTAAGAGAAACTTGTGCTAGAAGC 59.353 38.462 0.00 0.00 39.47 3.86
1558 2969 8.770438 ATCTTAAGAGAAACTTGTGCTAGAAG 57.230 34.615 11.53 0.00 39.38 2.85
1559 2970 9.561069 AAATCTTAAGAGAAACTTGTGCTAGAA 57.439 29.630 11.53 0.00 39.38 2.10
1560 2971 9.561069 AAAATCTTAAGAGAAACTTGTGCTAGA 57.439 29.630 11.53 0.00 39.38 2.43
1631 3047 8.253810 TCTAGATGTGAATTAGACAAACTGGAG 58.746 37.037 0.00 0.00 0.00 3.86
1666 3082 3.448686 GGAGGTTAGATGTGACATCGTG 58.551 50.000 18.85 0.00 0.00 4.35
1667 3083 2.431057 GGGAGGTTAGATGTGACATCGT 59.569 50.000 18.85 10.54 0.00 3.73
1668 3084 2.430694 TGGGAGGTTAGATGTGACATCG 59.569 50.000 18.85 0.00 0.00 3.84
1669 3085 4.696479 ATGGGAGGTTAGATGTGACATC 57.304 45.455 17.46 17.46 0.00 3.06
1670 3086 6.575244 TTTATGGGAGGTTAGATGTGACAT 57.425 37.500 0.00 0.00 0.00 3.06
1672 3088 9.003658 CATTATTTATGGGAGGTTAGATGTGAC 57.996 37.037 0.00 0.00 0.00 3.67
1673 3089 7.665559 GCATTATTTATGGGAGGTTAGATGTGA 59.334 37.037 0.00 0.00 34.66 3.58
1674 3090 7.448161 TGCATTATTTATGGGAGGTTAGATGTG 59.552 37.037 0.00 0.00 34.66 3.21
1676 3092 7.362401 GCTGCATTATTTATGGGAGGTTAGATG 60.362 40.741 0.00 0.00 34.66 2.90
1677 3093 6.660949 GCTGCATTATTTATGGGAGGTTAGAT 59.339 38.462 0.00 0.00 34.66 1.98
1678 3094 6.003950 GCTGCATTATTTATGGGAGGTTAGA 58.996 40.000 0.00 0.00 34.66 2.10
1679 3095 5.769662 TGCTGCATTATTTATGGGAGGTTAG 59.230 40.000 0.00 0.00 34.66 2.34
1681 3097 4.545678 TGCTGCATTATTTATGGGAGGTT 58.454 39.130 0.00 0.00 34.66 3.50
1684 3100 5.518848 TGTTGCTGCATTATTTATGGGAG 57.481 39.130 1.84 0.00 34.66 4.30
1686 3102 5.904941 TCTTGTTGCTGCATTATTTATGGG 58.095 37.500 1.84 0.00 34.66 4.00
1687 3103 7.331440 TGTTTCTTGTTGCTGCATTATTTATGG 59.669 33.333 1.84 0.00 34.66 2.74
1688 3104 8.242085 TGTTTCTTGTTGCTGCATTATTTATG 57.758 30.769 1.84 0.00 37.31 1.90
1689 3105 8.830201 TTGTTTCTTGTTGCTGCATTATTTAT 57.170 26.923 1.84 0.00 0.00 1.40
1690 3106 8.654230 TTTGTTTCTTGTTGCTGCATTATTTA 57.346 26.923 1.84 0.00 0.00 1.40
1691 3107 7.495279 TCTTTGTTTCTTGTTGCTGCATTATTT 59.505 29.630 1.84 0.00 0.00 1.40
1692 3108 6.985645 TCTTTGTTTCTTGTTGCTGCATTATT 59.014 30.769 1.84 0.00 0.00 1.40
1693 3109 6.514947 TCTTTGTTTCTTGTTGCTGCATTAT 58.485 32.000 1.84 0.00 0.00 1.28
1694 3110 5.900425 TCTTTGTTTCTTGTTGCTGCATTA 58.100 33.333 1.84 0.00 0.00 1.90
1695 3111 4.757594 TCTTTGTTTCTTGTTGCTGCATT 58.242 34.783 1.84 0.00 0.00 3.56
1696 3112 4.389890 TCTTTGTTTCTTGTTGCTGCAT 57.610 36.364 1.84 0.00 0.00 3.96
1697 3113 3.865011 TCTTTGTTTCTTGTTGCTGCA 57.135 38.095 0.00 0.00 0.00 4.41
1698 3114 5.529014 TTTTCTTTGTTTCTTGTTGCTGC 57.471 34.783 0.00 0.00 0.00 5.25
1735 3151 7.164230 TGTTCACTATGTTTGTGGTCTTTTT 57.836 32.000 0.00 0.00 36.21 1.94
1736 3152 6.767524 TGTTCACTATGTTTGTGGTCTTTT 57.232 33.333 0.00 0.00 36.21 2.27
1737 3153 6.293407 CGATGTTCACTATGTTTGTGGTCTTT 60.293 38.462 0.00 0.00 36.21 2.52
1738 3154 5.179368 CGATGTTCACTATGTTTGTGGTCTT 59.821 40.000 0.00 0.00 36.21 3.01
1739 3155 4.690748 CGATGTTCACTATGTTTGTGGTCT 59.309 41.667 0.00 0.00 36.21 3.85
1740 3156 4.142902 CCGATGTTCACTATGTTTGTGGTC 60.143 45.833 0.00 0.00 36.21 4.02
1741 3157 3.751175 CCGATGTTCACTATGTTTGTGGT 59.249 43.478 0.00 0.00 36.21 4.16
1742 3158 3.126858 CCCGATGTTCACTATGTTTGTGG 59.873 47.826 0.00 0.00 36.21 4.17
1743 3159 3.751175 ACCCGATGTTCACTATGTTTGTG 59.249 43.478 0.00 0.00 36.82 3.33
1744 3160 4.015872 ACCCGATGTTCACTATGTTTGT 57.984 40.909 0.00 0.00 0.00 2.83
1745 3161 5.872617 TCTAACCCGATGTTCACTATGTTTG 59.127 40.000 0.00 0.00 38.42 2.93
1746 3162 6.045072 TCTAACCCGATGTTCACTATGTTT 57.955 37.500 0.00 0.00 38.42 2.83
1747 3163 5.670792 TCTAACCCGATGTTCACTATGTT 57.329 39.130 0.00 0.00 38.42 2.71
1748 3164 5.601662 CATCTAACCCGATGTTCACTATGT 58.398 41.667 0.00 0.00 38.42 2.29
1749 3165 4.449068 GCATCTAACCCGATGTTCACTATG 59.551 45.833 0.00 0.00 42.14 2.23
1750 3166 4.632153 GCATCTAACCCGATGTTCACTAT 58.368 43.478 0.00 0.00 42.14 2.12
1751 3167 3.490249 CGCATCTAACCCGATGTTCACTA 60.490 47.826 0.00 0.00 42.14 2.74
1752 3168 2.738643 CGCATCTAACCCGATGTTCACT 60.739 50.000 0.00 0.00 42.14 3.41
1753 3169 1.593006 CGCATCTAACCCGATGTTCAC 59.407 52.381 0.00 0.00 42.14 3.18
1754 3170 1.478916 TCGCATCTAACCCGATGTTCA 59.521 47.619 0.00 0.00 42.14 3.18
1755 3171 1.859080 GTCGCATCTAACCCGATGTTC 59.141 52.381 0.00 0.00 42.14 3.18
1756 3172 1.206132 TGTCGCATCTAACCCGATGTT 59.794 47.619 0.00 0.00 42.14 2.71
1757 3173 0.821517 TGTCGCATCTAACCCGATGT 59.178 50.000 0.00 0.00 42.14 3.06
1758 3174 2.154854 ATGTCGCATCTAACCCGATG 57.845 50.000 0.00 0.00 42.83 3.84
1759 3175 2.891580 ACTATGTCGCATCTAACCCGAT 59.108 45.455 0.00 0.00 33.24 4.18
1760 3176 2.304092 ACTATGTCGCATCTAACCCGA 58.696 47.619 0.00 0.00 0.00 5.14
1761 3177 2.795175 ACTATGTCGCATCTAACCCG 57.205 50.000 0.00 0.00 0.00 5.28
1762 3178 5.539048 ACATAACTATGTCGCATCTAACCC 58.461 41.667 0.00 0.00 42.96 4.11
1788 3204 5.240623 GGTCTGTCTAGGACACATCTAGATG 59.759 48.000 27.63 27.63 43.25 2.90
1789 3205 5.381757 GGTCTGTCTAGGACACATCTAGAT 58.618 45.833 0.00 0.00 43.25 1.98
1790 3206 4.385421 GGGTCTGTCTAGGACACATCTAGA 60.385 50.000 0.00 0.00 37.67 2.43
1791 3207 3.886505 GGGTCTGTCTAGGACACATCTAG 59.113 52.174 0.00 0.00 37.67 2.43
1792 3208 3.528078 AGGGTCTGTCTAGGACACATCTA 59.472 47.826 3.18 0.00 39.36 1.98
1793 3209 2.313342 AGGGTCTGTCTAGGACACATCT 59.687 50.000 3.18 0.00 39.36 2.90
1794 3210 2.741145 AGGGTCTGTCTAGGACACATC 58.259 52.381 3.18 0.00 39.36 3.06
1795 3211 2.930109 AGGGTCTGTCTAGGACACAT 57.070 50.000 3.18 0.00 39.36 3.21
1796 3212 3.820195 TTAGGGTCTGTCTAGGACACA 57.180 47.619 3.18 0.00 39.36 3.72
1797 3213 4.024670 ACATTAGGGTCTGTCTAGGACAC 58.975 47.826 0.00 0.00 37.67 3.67
1798 3214 4.279145 GACATTAGGGTCTGTCTAGGACA 58.721 47.826 0.43 0.43 40.50 4.02
1799 3215 4.922471 GACATTAGGGTCTGTCTAGGAC 57.078 50.000 0.00 0.00 38.94 3.85
1808 3224 8.729186 TACTGCAGAGTGAGACATTAGGGTCT 62.729 46.154 23.35 0.00 41.03 3.85
1809 3225 2.497675 TGCAGAGTGAGACATTAGGGTC 59.502 50.000 0.00 0.00 38.08 4.46
1810 3226 2.499289 CTGCAGAGTGAGACATTAGGGT 59.501 50.000 8.42 0.00 0.00 4.34
1811 3227 2.499289 ACTGCAGAGTGAGACATTAGGG 59.501 50.000 23.35 0.00 0.00 3.53
1812 3228 3.883830 ACTGCAGAGTGAGACATTAGG 57.116 47.619 23.35 0.00 0.00 2.69
1813 3229 5.339177 CAGTACTGCAGAGTGAGACATTAG 58.661 45.833 23.35 0.00 33.21 1.73
1814 3230 4.158579 CCAGTACTGCAGAGTGAGACATTA 59.841 45.833 23.35 0.00 33.21 1.90
1815 3231 3.056250 CCAGTACTGCAGAGTGAGACATT 60.056 47.826 23.35 0.00 33.21 2.71
1816 3232 2.495270 CCAGTACTGCAGAGTGAGACAT 59.505 50.000 23.35 0.00 33.21 3.06
1822 3238 3.445450 ACATACTCCAGTACTGCAGAGTG 59.555 47.826 29.95 23.39 39.80 3.51
1871 3287 1.372307 GGCCACTTGCAAGCCAATT 59.628 52.632 26.27 3.26 46.34 2.32
1872 3288 3.062639 GGCCACTTGCAAGCCAAT 58.937 55.556 26.27 3.68 46.34 3.16
1889 3310 6.749118 GTGGAAAAATAGTGCTGCTATGAAAG 59.251 38.462 0.00 0.00 40.12 2.62
1897 3319 1.204704 GGGGTGGAAAAATAGTGCTGC 59.795 52.381 0.00 0.00 0.00 5.25
1903 3325 2.314852 AGGGGAAGGGGTGGAAAAATAG 59.685 50.000 0.00 0.00 0.00 1.73
1990 3501 9.444600 TGCACTAGTCCTTTTAAGTTAATTAGG 57.555 33.333 14.10 14.10 0.00 2.69
2023 3544 2.156051 GAGAAGTCGAGGGGCAACGT 62.156 60.000 0.00 0.00 37.60 3.99
2025 3546 0.321996 AAGAGAAGTCGAGGGGCAAC 59.678 55.000 0.00 0.00 0.00 4.17
2100 3625 4.079958 GGATTTCCCCCACAAGTGTATACT 60.080 45.833 4.17 0.00 39.32 2.12
2112 3637 2.578940 ACGTTGATTAGGATTTCCCCCA 59.421 45.455 0.00 0.00 36.42 4.96
2116 3643 4.332819 CAGTGGACGTTGATTAGGATTTCC 59.667 45.833 0.00 0.00 0.00 3.13
2117 3644 5.175859 TCAGTGGACGTTGATTAGGATTTC 58.824 41.667 0.00 0.00 0.00 2.17
2141 3668 2.350676 CGCACAATTAGCAACAGAAGCA 60.351 45.455 3.37 0.00 0.00 3.91
2205 3854 3.128349 TGAAGAAGTACCACTCGTTTGC 58.872 45.455 0.00 0.00 0.00 3.68
2321 3970 2.126031 GACGACGACCTTGGGCTC 60.126 66.667 0.00 0.00 0.00 4.70
2731 4516 2.189521 CCGATGGAAGGGAACGGG 59.810 66.667 0.00 0.00 39.92 5.28
2762 4550 1.285962 ACATGGCAGGAGCTGGTAATT 59.714 47.619 5.99 0.00 41.70 1.40
2779 4567 1.282738 TGTGGGTGCTGATGATCACAT 59.717 47.619 0.00 0.00 39.67 3.21
2819 4610 2.202756 GGGGTCGACATCGCTGAC 60.203 66.667 18.91 0.00 39.60 3.51
2844 4635 1.239296 GCTCAGCAGTTGTGGCATGA 61.239 55.000 0.00 0.00 0.00 3.07
2935 4726 1.523032 CTGCAGCTGATCATCGCCA 60.523 57.895 20.43 1.68 0.00 5.69
2937 4728 1.523258 ACCTGCAGCTGATCATCGC 60.523 57.895 20.43 0.00 0.00 4.58
2974 4792 7.492669 ACACACATCTATATCAAGCTGTTGTAC 59.507 37.037 0.00 0.00 34.98 2.90
3046 4873 9.692749 GTACATGTAGCATTACTGTGTATATGT 57.307 33.333 5.62 0.00 35.78 2.29
3067 4894 9.685828 GTAAAACCATGTAACATGTTTGTACAT 57.314 29.630 17.78 16.91 45.81 2.29
3068 4895 8.683615 TGTAAAACCATGTAACATGTTTGTACA 58.316 29.630 17.78 15.32 38.95 2.90
3069 4896 9.176181 CTGTAAAACCATGTAACATGTTTGTAC 57.824 33.333 17.78 9.69 34.06 2.90
3070 4897 9.121658 TCTGTAAAACCATGTAACATGTTTGTA 57.878 29.630 17.78 4.02 34.06 2.41
3071 4898 8.001881 TCTGTAAAACCATGTAACATGTTTGT 57.998 30.769 17.78 4.19 37.82 2.83
3072 4899 8.864069 TTCTGTAAAACCATGTAACATGTTTG 57.136 30.769 17.78 9.08 0.00 2.93
3073 4900 9.474920 CATTCTGTAAAACCATGTAACATGTTT 57.525 29.630 17.78 0.00 0.00 2.83
3074 4901 8.087750 CCATTCTGTAAAACCATGTAACATGTT 58.912 33.333 16.68 16.68 0.00 2.71
3075 4902 7.309744 CCCATTCTGTAAAACCATGTAACATGT 60.310 37.037 0.00 0.00 0.00 3.21
3076 4903 7.035004 CCCATTCTGTAAAACCATGTAACATG 58.965 38.462 0.00 0.00 0.00 3.21
3077 4904 6.723977 ACCCATTCTGTAAAACCATGTAACAT 59.276 34.615 0.00 0.00 0.00 2.71
3078 4905 6.071984 ACCCATTCTGTAAAACCATGTAACA 58.928 36.000 0.00 0.00 0.00 2.41
3079 4906 6.584185 ACCCATTCTGTAAAACCATGTAAC 57.416 37.500 0.00 0.00 0.00 2.50
3080 4907 8.707796 TTAACCCATTCTGTAAAACCATGTAA 57.292 30.769 0.00 0.00 0.00 2.41
3081 4908 8.887264 ATTAACCCATTCTGTAAAACCATGTA 57.113 30.769 0.00 0.00 0.00 2.29
3082 4909 7.790782 ATTAACCCATTCTGTAAAACCATGT 57.209 32.000 0.00 0.00 0.00 3.21
3083 4910 8.934825 CAAATTAACCCATTCTGTAAAACCATG 58.065 33.333 0.00 0.00 0.00 3.66
3084 4911 8.875168 TCAAATTAACCCATTCTGTAAAACCAT 58.125 29.630 0.00 0.00 0.00 3.55
3085 4912 8.251383 TCAAATTAACCCATTCTGTAAAACCA 57.749 30.769 0.00 0.00 0.00 3.67
3086 4913 9.719355 AATCAAATTAACCCATTCTGTAAAACC 57.281 29.630 0.00 0.00 0.00 3.27
3088 4915 9.717942 CCAATCAAATTAACCCATTCTGTAAAA 57.282 29.630 0.00 0.00 0.00 1.52
3089 4916 8.875168 ACCAATCAAATTAACCCATTCTGTAAA 58.125 29.630 0.00 0.00 0.00 2.01
3090 4917 8.429237 ACCAATCAAATTAACCCATTCTGTAA 57.571 30.769 0.00 0.00 0.00 2.41
3091 4918 7.671819 TGACCAATCAAATTAACCCATTCTGTA 59.328 33.333 0.00 0.00 0.00 2.74
3092 4919 6.496565 TGACCAATCAAATTAACCCATTCTGT 59.503 34.615 0.00 0.00 0.00 3.41
3093 4920 6.934056 TGACCAATCAAATTAACCCATTCTG 58.066 36.000 0.00 0.00 0.00 3.02
3094 4921 7.552050 TTGACCAATCAAATTAACCCATTCT 57.448 32.000 0.00 0.00 41.99 2.40
3108 4935 3.805066 TCCTCACCAATTGACCAATCA 57.195 42.857 7.12 0.00 0.00 2.57
3109 4936 4.156739 GTCTTCCTCACCAATTGACCAATC 59.843 45.833 7.12 0.00 0.00 2.67
3110 4937 4.082125 GTCTTCCTCACCAATTGACCAAT 58.918 43.478 7.12 0.00 0.00 3.16
3111 4938 3.486383 GTCTTCCTCACCAATTGACCAA 58.514 45.455 7.12 0.00 0.00 3.67
3112 4939 2.549992 CGTCTTCCTCACCAATTGACCA 60.550 50.000 7.12 0.00 0.00 4.02
3113 4940 2.076863 CGTCTTCCTCACCAATTGACC 58.923 52.381 7.12 0.00 0.00 4.02
3114 4941 2.076863 CCGTCTTCCTCACCAATTGAC 58.923 52.381 7.12 0.00 0.00 3.18
3115 4942 1.610624 GCCGTCTTCCTCACCAATTGA 60.611 52.381 7.12 0.00 0.00 2.57
3116 4943 0.804989 GCCGTCTTCCTCACCAATTG 59.195 55.000 0.00 0.00 0.00 2.32
3117 4944 0.322546 GGCCGTCTTCCTCACCAATT 60.323 55.000 0.00 0.00 0.00 2.32
3118 4945 1.299976 GGCCGTCTTCCTCACCAAT 59.700 57.895 0.00 0.00 0.00 3.16
3119 4946 2.747686 GGCCGTCTTCCTCACCAA 59.252 61.111 0.00 0.00 0.00 3.67
3120 4947 3.319198 GGGCCGTCTTCCTCACCA 61.319 66.667 0.00 0.00 0.00 4.17
3121 4948 2.890766 TTGGGCCGTCTTCCTCACC 61.891 63.158 0.00 0.00 0.00 4.02
3122 4949 1.671379 GTTGGGCCGTCTTCCTCAC 60.671 63.158 0.00 0.00 0.00 3.51
3123 4950 2.747686 GTTGGGCCGTCTTCCTCA 59.252 61.111 0.00 0.00 0.00 3.86
3124 4951 2.046217 GGTTGGGCCGTCTTCCTC 60.046 66.667 0.00 0.00 0.00 3.71
3125 4952 3.647771 GGGTTGGGCCGTCTTCCT 61.648 66.667 0.00 0.00 38.44 3.36
3126 4953 4.735358 GGGGTTGGGCCGTCTTCC 62.735 72.222 0.00 0.00 38.44 3.46
3127 4954 3.647771 AGGGGTTGGGCCGTCTTC 61.648 66.667 0.00 0.00 38.44 2.87
3128 4955 3.966543 CAGGGGTTGGGCCGTCTT 61.967 66.667 0.00 0.00 38.44 3.01
3129 4956 4.974438 TCAGGGGTTGGGCCGTCT 62.974 66.667 0.00 0.00 38.44 4.18
3130 4957 2.987355 TTTTCAGGGGTTGGGCCGTC 62.987 60.000 0.00 0.00 38.44 4.79
3131 4958 2.380571 ATTTTCAGGGGTTGGGCCGT 62.381 55.000 0.00 0.00 38.44 5.68
3132 4959 1.604147 GATTTTCAGGGGTTGGGCCG 61.604 60.000 0.00 0.00 38.44 6.13
3133 4960 0.544120 TGATTTTCAGGGGTTGGGCC 60.544 55.000 0.00 0.00 0.00 5.80
3134 4961 0.897621 CTGATTTTCAGGGGTTGGGC 59.102 55.000 0.00 0.00 40.71 5.36
3135 4962 2.450476 CTCTGATTTTCAGGGGTTGGG 58.550 52.381 4.78 0.00 41.25 4.12
3141 4968 0.332632 TGCCCCTCTGATTTTCAGGG 59.667 55.000 4.78 1.10 44.51 4.45
3142 4969 2.220653 TTGCCCCTCTGATTTTCAGG 57.779 50.000 4.78 0.00 44.39 3.86
3143 4970 3.160269 ACTTTGCCCCTCTGATTTTCAG 58.840 45.455 0.00 0.00 45.59 3.02
3144 4971 3.243359 ACTTTGCCCCTCTGATTTTCA 57.757 42.857 0.00 0.00 0.00 2.69
3145 4972 4.202253 ACAAACTTTGCCCCTCTGATTTTC 60.202 41.667 1.14 0.00 0.00 2.29
3146 4973 3.711190 ACAAACTTTGCCCCTCTGATTTT 59.289 39.130 1.14 0.00 0.00 1.82
3147 4974 3.070015 CACAAACTTTGCCCCTCTGATTT 59.930 43.478 1.14 0.00 0.00 2.17
3148 4975 2.629617 CACAAACTTTGCCCCTCTGATT 59.370 45.455 1.14 0.00 0.00 2.57
3149 4976 2.158475 TCACAAACTTTGCCCCTCTGAT 60.158 45.455 1.14 0.00 0.00 2.90
3150 4977 1.214175 TCACAAACTTTGCCCCTCTGA 59.786 47.619 1.14 0.00 0.00 3.27
3151 4978 1.691196 TCACAAACTTTGCCCCTCTG 58.309 50.000 1.14 0.00 0.00 3.35
3152 4979 2.629617 CAATCACAAACTTTGCCCCTCT 59.370 45.455 1.14 0.00 0.00 3.69
3153 4980 2.627699 TCAATCACAAACTTTGCCCCTC 59.372 45.455 1.14 0.00 0.00 4.30
3154 4981 2.676748 TCAATCACAAACTTTGCCCCT 58.323 42.857 1.14 0.00 0.00 4.79
3155 4982 3.683365 ATCAATCACAAACTTTGCCCC 57.317 42.857 1.14 0.00 0.00 5.80
3156 4983 8.250332 TCTAATAATCAATCACAAACTTTGCCC 58.750 33.333 1.14 0.00 0.00 5.36
3157 4984 9.807649 ATCTAATAATCAATCACAAACTTTGCC 57.192 29.630 1.14 0.00 0.00 4.52
3167 4994 9.890352 GGCTCTTTTCATCTAATAATCAATCAC 57.110 33.333 0.00 0.00 0.00 3.06
3168 4995 9.857656 AGGCTCTTTTCATCTAATAATCAATCA 57.142 29.630 0.00 0.00 0.00 2.57
3170 4997 9.638176 ACAGGCTCTTTTCATCTAATAATCAAT 57.362 29.630 0.00 0.00 0.00 2.57
3177 5004 9.466497 TGATTTTACAGGCTCTTTTCATCTAAT 57.534 29.630 0.00 0.00 0.00 1.73
3178 5005 8.862325 TGATTTTACAGGCTCTTTTCATCTAA 57.138 30.769 0.00 0.00 0.00 2.10
3179 5006 8.896744 CATGATTTTACAGGCTCTTTTCATCTA 58.103 33.333 0.00 0.00 0.00 1.98
3180 5007 7.395489 ACATGATTTTACAGGCTCTTTTCATCT 59.605 33.333 0.00 0.00 0.00 2.90
3181 5008 7.542025 ACATGATTTTACAGGCTCTTTTCATC 58.458 34.615 0.00 0.00 0.00 2.92
3182 5009 7.472334 ACATGATTTTACAGGCTCTTTTCAT 57.528 32.000 0.00 0.00 0.00 2.57
3183 5010 6.899393 ACATGATTTTACAGGCTCTTTTCA 57.101 33.333 0.00 0.00 0.00 2.69
3184 5011 9.860898 AAATACATGATTTTACAGGCTCTTTTC 57.139 29.630 0.00 0.00 33.77 2.29
3185 5012 9.643693 CAAATACATGATTTTACAGGCTCTTTT 57.356 29.630 0.00 0.00 35.45 2.27
3186 5013 8.806146 ACAAATACATGATTTTACAGGCTCTTT 58.194 29.630 0.00 0.00 35.45 2.52
3187 5014 8.353423 ACAAATACATGATTTTACAGGCTCTT 57.647 30.769 0.00 0.00 35.45 2.85
3188 5015 7.944729 ACAAATACATGATTTTACAGGCTCT 57.055 32.000 0.00 0.00 35.45 4.09
3189 5016 8.863049 CAAACAAATACATGATTTTACAGGCTC 58.137 33.333 0.00 0.00 35.45 4.70
3190 5017 8.367156 ACAAACAAATACATGATTTTACAGGCT 58.633 29.630 0.00 0.00 35.45 4.58
3191 5018 8.532977 ACAAACAAATACATGATTTTACAGGC 57.467 30.769 0.00 0.00 35.45 4.85
3209 5036 8.547069 GCTCAAAAATGCTAAACATACAAACAA 58.453 29.630 0.00 0.00 38.34 2.83
3210 5037 7.170658 GGCTCAAAAATGCTAAACATACAAACA 59.829 33.333 0.00 0.00 38.34 2.83
3211 5038 7.170658 TGGCTCAAAAATGCTAAACATACAAAC 59.829 33.333 0.00 0.00 38.34 2.93
3212 5039 7.170658 GTGGCTCAAAAATGCTAAACATACAAA 59.829 33.333 0.00 0.00 38.34 2.83
3213 5040 6.644592 GTGGCTCAAAAATGCTAAACATACAA 59.355 34.615 0.00 0.00 38.34 2.41
3214 5041 6.155827 GTGGCTCAAAAATGCTAAACATACA 58.844 36.000 0.00 0.00 38.34 2.29
3215 5042 5.286082 CGTGGCTCAAAAATGCTAAACATAC 59.714 40.000 0.00 0.00 38.34 2.39
3216 5043 5.398169 CGTGGCTCAAAAATGCTAAACATA 58.602 37.500 0.00 0.00 38.34 2.29
3217 5044 4.236935 CGTGGCTCAAAAATGCTAAACAT 58.763 39.130 0.00 0.00 42.30 2.71
3218 5045 3.637432 CGTGGCTCAAAAATGCTAAACA 58.363 40.909 0.00 0.00 0.00 2.83
3219 5046 2.408368 GCGTGGCTCAAAAATGCTAAAC 59.592 45.455 0.00 0.00 0.00 2.01
3220 5047 2.671596 GCGTGGCTCAAAAATGCTAAA 58.328 42.857 0.00 0.00 0.00 1.85
3221 5048 1.400888 CGCGTGGCTCAAAAATGCTAA 60.401 47.619 0.00 0.00 0.00 3.09
3222 5049 0.167908 CGCGTGGCTCAAAAATGCTA 59.832 50.000 0.00 0.00 0.00 3.49
3223 5050 1.081242 CGCGTGGCTCAAAAATGCT 60.081 52.632 0.00 0.00 0.00 3.79
3224 5051 0.939106 AACGCGTGGCTCAAAAATGC 60.939 50.000 14.98 0.00 0.00 3.56
3225 5052 1.189884 CAAACGCGTGGCTCAAAAATG 59.810 47.619 14.98 0.00 0.00 2.32
3226 5053 1.202359 ACAAACGCGTGGCTCAAAAAT 60.202 42.857 14.98 0.00 0.00 1.82
3227 5054 0.171455 ACAAACGCGTGGCTCAAAAA 59.829 45.000 14.98 0.00 0.00 1.94
3228 5055 0.171455 AACAAACGCGTGGCTCAAAA 59.829 45.000 14.98 0.00 0.00 2.44
3229 5056 0.524392 CAACAAACGCGTGGCTCAAA 60.524 50.000 14.98 0.00 0.00 2.69
3230 5057 1.063327 CAACAAACGCGTGGCTCAA 59.937 52.632 14.98 0.00 0.00 3.02
3231 5058 1.815840 TCAACAAACGCGTGGCTCA 60.816 52.632 14.98 0.00 0.00 4.26
3232 5059 1.368850 GTCAACAAACGCGTGGCTC 60.369 57.895 14.98 0.00 0.00 4.70
3233 5060 2.109739 TGTCAACAAACGCGTGGCT 61.110 52.632 14.98 0.00 0.00 4.75
3234 5061 1.937362 GTGTCAACAAACGCGTGGC 60.937 57.895 14.98 0.74 0.00 5.01
3235 5062 0.179187 TTGTGTCAACAAACGCGTGG 60.179 50.000 14.98 11.58 43.32 4.94
3236 5063 3.298126 TTGTGTCAACAAACGCGTG 57.702 47.368 14.98 3.14 43.32 5.34
3244 5071 1.288350 CGTACCGGTTTGTGTCAACA 58.712 50.000 15.04 0.00 0.00 3.33
3273 5100 3.489059 CCGGGTCATATGATTTGTTGCAC 60.489 47.826 9.02 0.00 0.00 4.57
3289 5116 1.817209 CTTGTCTAGCTCCCGGGTC 59.183 63.158 22.86 14.00 0.00 4.46
3290 5117 2.359967 GCTTGTCTAGCTCCCGGGT 61.360 63.158 22.86 3.24 46.77 5.28
3299 5126 2.669670 CGTGAGTGGTCAGCTTGTCTAG 60.670 54.545 0.00 0.00 31.53 2.43
3332 5159 1.445410 GTGTGCGTCATCGTAGCCA 60.445 57.895 0.00 0.00 39.49 4.75
3356 5185 4.317671 AAGAAATGTCTATACCGGTCCG 57.682 45.455 12.40 3.60 32.16 4.79
3375 5204 4.504461 CAGTTGCGCTTCCTATGTAGTAAG 59.496 45.833 9.73 0.00 0.00 2.34
3377 5206 3.446161 ACAGTTGCGCTTCCTATGTAGTA 59.554 43.478 9.73 0.00 0.00 1.82
3378 5207 2.233922 ACAGTTGCGCTTCCTATGTAGT 59.766 45.455 9.73 0.00 0.00 2.73
3379 5208 2.893637 ACAGTTGCGCTTCCTATGTAG 58.106 47.619 9.73 0.00 0.00 2.74
3394 5223 8.322091 AGTTTATTAGCTGAGGTATGAACAGTT 58.678 33.333 0.00 0.00 34.60 3.16
3471 5564 8.693625 GGGTACTAGTAATTAAGCTCTCAAGAA 58.306 37.037 3.61 0.00 0.00 2.52
3478 5571 5.278709 GGACGGGGTACTAGTAATTAAGCTC 60.279 48.000 3.61 0.00 0.00 4.09
3510 5603 2.178912 TGGACAAGCCCTTAACTTCG 57.821 50.000 0.00 0.00 34.97 3.79
3518 5611 2.031870 GTTTGACTTTGGACAAGCCCT 58.968 47.619 0.00 0.00 34.97 5.19
3698 5800 8.437742 CAAAATGATTGAAGTTATTGGCTTGTC 58.562 33.333 0.00 0.00 0.00 3.18
3768 5870 6.663944 AGAATTAGTTACGTTGCTTGATCC 57.336 37.500 0.00 0.00 0.00 3.36
3774 5876 7.331193 CCTTGTAGAAGAATTAGTTACGTTGCT 59.669 37.037 0.19 0.00 0.00 3.91
3801 5903 1.582389 AGAGGCCTCTCTTGCATCTT 58.418 50.000 30.40 3.41 46.69 2.40
3825 5927 5.305128 TGAAGAAATCAACAAGGGCTTGATT 59.695 36.000 6.61 6.61 45.96 2.57
3828 5930 4.553323 CTGAAGAAATCAACAAGGGCTTG 58.447 43.478 0.00 0.00 37.67 4.01
3869 5971 5.046376 TGAGATTAGTGTGAAGCCTTGATGA 60.046 40.000 0.00 0.00 0.00 2.92
3882 5984 5.355350 GCTGCCACTTTATTGAGATTAGTGT 59.645 40.000 0.00 0.00 35.58 3.55
3885 5987 6.630444 ATGCTGCCACTTTATTGAGATTAG 57.370 37.500 0.00 0.00 0.00 1.73
3940 6042 1.947456 GTCTCCTCCGTTGCTTGTTTT 59.053 47.619 0.00 0.00 0.00 2.43
3941 6043 1.594331 GTCTCCTCCGTTGCTTGTTT 58.406 50.000 0.00 0.00 0.00 2.83
3942 6044 0.250338 GGTCTCCTCCGTTGCTTGTT 60.250 55.000 0.00 0.00 0.00 2.83
3943 6045 1.371558 GGTCTCCTCCGTTGCTTGT 59.628 57.895 0.00 0.00 0.00 3.16
3944 6046 0.250295 TTGGTCTCCTCCGTTGCTTG 60.250 55.000 0.00 0.00 0.00 4.01
3945 6047 0.472471 TTTGGTCTCCTCCGTTGCTT 59.528 50.000 0.00 0.00 0.00 3.91
3946 6048 0.472471 TTTTGGTCTCCTCCGTTGCT 59.528 50.000 0.00 0.00 0.00 3.91
3947 6049 1.314730 TTTTTGGTCTCCTCCGTTGC 58.685 50.000 0.00 0.00 0.00 4.17
3948 6050 4.324267 AGTATTTTTGGTCTCCTCCGTTG 58.676 43.478 0.00 0.00 0.00 4.10
3949 6051 4.635699 AGTATTTTTGGTCTCCTCCGTT 57.364 40.909 0.00 0.00 0.00 4.44
3950 6052 5.750352 TTAGTATTTTTGGTCTCCTCCGT 57.250 39.130 0.00 0.00 0.00 4.69
3951 6053 6.346096 TGATTAGTATTTTTGGTCTCCTCCG 58.654 40.000 0.00 0.00 0.00 4.63
3952 6054 8.624776 CATTGATTAGTATTTTTGGTCTCCTCC 58.375 37.037 0.00 0.00 0.00 4.30
3953 6055 8.624776 CCATTGATTAGTATTTTTGGTCTCCTC 58.375 37.037 0.00 0.00 0.00 3.71
3954 6056 7.068716 GCCATTGATTAGTATTTTTGGTCTCCT 59.931 37.037 0.00 0.00 0.00 3.69
3955 6057 7.203218 GCCATTGATTAGTATTTTTGGTCTCC 58.797 38.462 0.00 0.00 0.00 3.71
3956 6058 6.912591 CGCCATTGATTAGTATTTTTGGTCTC 59.087 38.462 0.00 0.00 0.00 3.36
3957 6059 6.183360 CCGCCATTGATTAGTATTTTTGGTCT 60.183 38.462 0.00 0.00 0.00 3.85
3958 6060 5.977129 CCGCCATTGATTAGTATTTTTGGTC 59.023 40.000 0.00 0.00 0.00 4.02
3959 6061 5.654650 TCCGCCATTGATTAGTATTTTTGGT 59.345 36.000 0.00 0.00 0.00 3.67
3960 6062 6.142818 TCCGCCATTGATTAGTATTTTTGG 57.857 37.500 0.00 0.00 0.00 3.28
3961 6063 7.920151 TCATTCCGCCATTGATTAGTATTTTTG 59.080 33.333 0.00 0.00 0.00 2.44
3962 6064 8.006298 TCATTCCGCCATTGATTAGTATTTTT 57.994 30.769 0.00 0.00 0.00 1.94
3963 6065 7.581213 TCATTCCGCCATTGATTAGTATTTT 57.419 32.000 0.00 0.00 0.00 1.82
3964 6066 7.596494 CATCATTCCGCCATTGATTAGTATTT 58.404 34.615 0.00 0.00 0.00 1.40
3965 6067 6.349611 GCATCATTCCGCCATTGATTAGTATT 60.350 38.462 0.00 0.00 0.00 1.89
3966 6068 5.124457 GCATCATTCCGCCATTGATTAGTAT 59.876 40.000 0.00 0.00 0.00 2.12
3967 6069 4.455533 GCATCATTCCGCCATTGATTAGTA 59.544 41.667 0.00 0.00 0.00 1.82
3968 6070 3.254166 GCATCATTCCGCCATTGATTAGT 59.746 43.478 0.00 0.00 0.00 2.24
3969 6071 3.829948 GCATCATTCCGCCATTGATTAG 58.170 45.455 0.00 0.00 0.00 1.73
3970 6072 3.921119 GCATCATTCCGCCATTGATTA 57.079 42.857 0.00 0.00 0.00 1.75
3971 6073 2.806608 GCATCATTCCGCCATTGATT 57.193 45.000 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.