Multiple sequence alignment - TraesCS6B01G415800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G415800 chr6B 100.000 6181 0 0 1 6181 688297315 688303495 0.000000e+00 11415.0
1 TraesCS6B01G415800 chr6D 91.446 3320 170 56 2411 5643 453011515 453014807 0.000000e+00 4453.0
2 TraesCS6B01G415800 chr6D 92.546 2388 82 53 1 2364 453009209 453011524 0.000000e+00 3336.0
3 TraesCS6B01G415800 chr6A 86.727 2411 189 77 3537 5851 599049883 599052258 0.000000e+00 2558.0
4 TraesCS6B01G415800 chr6A 84.813 1633 142 63 728 2319 599047176 599048743 0.000000e+00 1544.0
5 TraesCS6B01G415800 chr6A 89.628 1022 65 17 2557 3557 599048875 599049876 0.000000e+00 1262.0
6 TraesCS6B01G415800 chr6A 87.705 732 31 28 1 696 599046302 599047010 0.000000e+00 798.0
7 TraesCS6B01G415800 chr7B 83.146 267 38 5 2307 2571 505937837 505937576 2.880000e-58 237.0
8 TraesCS6B01G415800 chr7B 81.716 268 37 10 2306 2567 504479917 504480178 4.850000e-51 213.0
9 TraesCS6B01G415800 chr7B 83.475 236 28 7 2307 2535 107645112 107645343 6.280000e-50 209.0
10 TraesCS6B01G415800 chr7B 100.000 31 0 0 324 354 566837840 566837810 2.410000e-04 58.4
11 TraesCS6B01G415800 chr4B 82.197 264 42 3 2305 2564 611855883 611856145 8.060000e-54 222.0
12 TraesCS6B01G415800 chr2B 82.331 266 37 7 2307 2564 420448377 420448114 8.060000e-54 222.0
13 TraesCS6B01G415800 chrUn 82.129 263 34 8 2307 2564 318938347 318938601 4.850000e-51 213.0
14 TraesCS6B01G415800 chr4D 81.439 264 43 4 2305 2564 482161464 482161725 1.750000e-50 211.0
15 TraesCS6B01G415800 chr2A 80.989 263 43 4 2307 2564 691115426 691115166 1.050000e-47 202.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G415800 chr6B 688297315 688303495 6180 False 11415.0 11415 100.00000 1 6181 1 chr6B.!!$F1 6180
1 TraesCS6B01G415800 chr6D 453009209 453014807 5598 False 3894.5 4453 91.99600 1 5643 2 chr6D.!!$F1 5642
2 TraesCS6B01G415800 chr6A 599046302 599052258 5956 False 1540.5 2558 87.21825 1 5851 4 chr6A.!!$F1 5850

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
270 274 0.925267 TTGTTGTCGTCGTCGTCGTC 60.925 55.000 11.41 6.94 38.33 4.20 F
544 550 1.866601 TGCATTGCTTCGGTATCGATG 59.133 47.619 8.54 2.32 45.51 3.84 F
1314 1513 0.447801 GCCGTGTGATGAATGTGGTC 59.552 55.000 0.00 0.00 0.00 4.02 F
1833 2037 0.109342 CCTGGTCTGGCAGAAACTGT 59.891 55.000 20.62 0.00 33.43 3.55 F
3054 3316 2.034104 TGTTCATCAGAGATGCCTGC 57.966 50.000 2.19 0.00 34.28 4.85 F
4661 4965 0.036010 CCATCACCGAGCAAAGTCCT 60.036 55.000 0.00 0.00 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1096 1295 0.252558 ATTACTGGACTGGACGGGGT 60.253 55.000 0.0 0.0 0.00 4.95 R
1348 1547 0.759346 CCCGACCTAGATCCCCAAAG 59.241 60.000 0.0 0.0 0.00 2.77 R
2991 3253 0.605319 GGCGTGGAAAGTGGTCATGA 60.605 55.000 0.0 0.0 0.00 3.07 R
3344 3607 3.186613 GTCGGATTCAAGGTCTGTTTGTC 59.813 47.826 0.0 0.0 0.00 3.18 R
4799 5103 0.038744 ATGCTCCTTTGAGGGGTGTG 59.961 55.000 0.0 0.0 38.44 3.82 R
6156 6575 0.174617 GAGGGGAGAGAAGAAGCACG 59.825 60.000 0.0 0.0 0.00 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.567747 GCAAGAGGAAATAACAGGAAGGGA 60.568 45.833 0.00 0.00 0.00 4.20
35 36 2.204306 AAGGGAGGGGGACAAGGG 60.204 66.667 0.00 0.00 0.00 3.95
36 37 2.782997 GAAGGGAGGGGGACAAGGGA 62.783 65.000 0.00 0.00 0.00 4.20
37 38 2.204244 GGGAGGGGGACAAGGGAA 60.204 66.667 0.00 0.00 0.00 3.97
38 39 2.613482 GGGAGGGGGACAAGGGAAC 61.613 68.421 0.00 0.00 0.00 3.62
118 119 4.839121 TGTAAATGACAGGATACCACCAC 58.161 43.478 0.00 0.00 32.86 4.16
119 120 3.366052 AAATGACAGGATACCACCACC 57.634 47.619 0.00 0.00 37.17 4.61
120 121 1.965414 ATGACAGGATACCACCACCA 58.035 50.000 0.00 0.00 37.17 4.17
170 171 3.686227 TCCCATAATTTCCATGGTGCT 57.314 42.857 12.58 0.00 41.26 4.40
262 266 1.128878 TGTTGGTTGTTGTTGTCGTCG 59.871 47.619 0.00 0.00 0.00 5.12
268 272 1.195513 TGTTGTTGTCGTCGTCGTCG 61.196 55.000 5.50 5.50 38.33 5.12
269 273 1.062365 TTGTTGTCGTCGTCGTCGT 59.938 52.632 11.41 0.00 38.33 4.34
270 274 0.925267 TTGTTGTCGTCGTCGTCGTC 60.925 55.000 11.41 6.94 38.33 4.20
271 275 2.128017 TTGTCGTCGTCGTCGTCG 60.128 61.111 14.18 14.18 46.06 5.12
413 417 6.385649 TTTCCGAGACTTTGCTGTAATTTT 57.614 33.333 0.00 0.00 0.00 1.82
414 418 5.607119 TCCGAGACTTTGCTGTAATTTTC 57.393 39.130 0.00 0.00 0.00 2.29
415 419 5.305585 TCCGAGACTTTGCTGTAATTTTCT 58.694 37.500 0.00 0.00 0.00 2.52
416 420 5.408604 TCCGAGACTTTGCTGTAATTTTCTC 59.591 40.000 0.00 0.00 0.00 2.87
420 424 6.538263 AGACTTTGCTGTAATTTTCTCTCCT 58.462 36.000 0.00 0.00 0.00 3.69
421 425 6.652900 AGACTTTGCTGTAATTTTCTCTCCTC 59.347 38.462 0.00 0.00 0.00 3.71
422 426 6.538263 ACTTTGCTGTAATTTTCTCTCCTCT 58.462 36.000 0.00 0.00 0.00 3.69
423 427 6.652900 ACTTTGCTGTAATTTTCTCTCCTCTC 59.347 38.462 0.00 0.00 0.00 3.20
424 428 6.365970 TTGCTGTAATTTTCTCTCCTCTCT 57.634 37.500 0.00 0.00 0.00 3.10
425 429 6.365970 TGCTGTAATTTTCTCTCCTCTCTT 57.634 37.500 0.00 0.00 0.00 2.85
458 462 2.373169 ACCTCTGGATCTGCTTGTTCAA 59.627 45.455 0.00 0.00 0.00 2.69
502 508 8.507524 AGTAACTTCCAGTATAAAATTCCAGC 57.492 34.615 0.00 0.00 0.00 4.85
533 539 8.696043 TGGTTATAGATATTCTTGCATTGCTT 57.304 30.769 10.49 0.00 0.00 3.91
542 548 1.933181 CTTGCATTGCTTCGGTATCGA 59.067 47.619 10.49 0.00 44.44 3.59
543 549 2.238942 TGCATTGCTTCGGTATCGAT 57.761 45.000 10.49 2.16 45.51 3.59
544 550 1.866601 TGCATTGCTTCGGTATCGATG 59.133 47.619 8.54 2.32 45.51 3.84
545 551 1.867233 GCATTGCTTCGGTATCGATGT 59.133 47.619 8.54 0.00 45.51 3.06
546 552 3.057019 GCATTGCTTCGGTATCGATGTA 58.943 45.455 8.54 5.62 45.51 2.29
550 556 6.508563 GCATTGCTTCGGTATCGATGTATATG 60.509 42.308 8.54 13.33 45.51 1.78
555 590 6.251589 GCTTCGGTATCGATGTATATGAACTG 59.748 42.308 8.54 0.47 45.51 3.16
769 955 9.974980 TTTTTAAAAGTTGATTCCTTATTCGCT 57.025 25.926 0.14 0.00 0.00 4.93
808 994 7.094506 GGAAGTAAAATAACCCTGTACCTGTTG 60.095 40.741 0.00 0.00 0.00 3.33
816 1002 2.663852 GTACCTGTTGCCACGCGT 60.664 61.111 5.58 5.58 0.00 6.01
836 1022 3.569210 CACTGGCAGGTGGGACCA 61.569 66.667 20.34 0.00 41.95 4.02
848 1034 2.821366 GGACCAGCATGTCAGCCG 60.821 66.667 7.77 0.00 36.97 5.52
873 1059 2.211806 CGTCGTTTTCACTTTACCCCA 58.788 47.619 0.00 0.00 0.00 4.96
879 1066 2.554370 TTCACTTTACCCCAGAACGG 57.446 50.000 0.00 0.00 0.00 4.44
1192 1391 4.410400 CTGGCCAACCTCGTCCCC 62.410 72.222 7.01 0.00 36.63 4.81
1274 1473 3.055719 CTCCCGCGCCACATGTTT 61.056 61.111 0.00 0.00 0.00 2.83
1275 1474 2.596046 TCCCGCGCCACATGTTTT 60.596 55.556 0.00 0.00 0.00 2.43
1276 1475 2.141122 CTCCCGCGCCACATGTTTTT 62.141 55.000 0.00 0.00 0.00 1.94
1305 1504 4.794439 TCTCCGCGCCGTGTGATG 62.794 66.667 0.00 0.00 0.00 3.07
1306 1505 4.794439 CTCCGCGCCGTGTGATGA 62.794 66.667 0.00 0.00 0.00 2.92
1309 1508 2.021793 CGCGCCGTGTGATGAATG 59.978 61.111 0.00 0.00 0.00 2.67
1312 1511 1.425031 CGCCGTGTGATGAATGTGG 59.575 57.895 0.00 0.00 0.00 4.17
1314 1513 0.447801 GCCGTGTGATGAATGTGGTC 59.552 55.000 0.00 0.00 0.00 4.02
1315 1514 1.945819 GCCGTGTGATGAATGTGGTCT 60.946 52.381 0.00 0.00 0.00 3.85
1316 1515 2.002586 CCGTGTGATGAATGTGGTCTC 58.997 52.381 0.00 0.00 0.00 3.36
1319 1518 3.668447 GTGTGATGAATGTGGTCTCTGT 58.332 45.455 0.00 0.00 0.00 3.41
1321 1520 4.516698 GTGTGATGAATGTGGTCTCTGTTT 59.483 41.667 0.00 0.00 0.00 2.83
1323 1522 5.239306 TGTGATGAATGTGGTCTCTGTTTTC 59.761 40.000 0.00 0.00 0.00 2.29
1326 1525 5.034852 TGAATGTGGTCTCTGTTTTCTGA 57.965 39.130 0.00 0.00 0.00 3.27
1327 1526 5.436175 TGAATGTGGTCTCTGTTTTCTGAA 58.564 37.500 0.00 0.00 0.00 3.02
1328 1527 5.885352 TGAATGTGGTCTCTGTTTTCTGAAA 59.115 36.000 0.00 0.00 0.00 2.69
1329 1528 6.547141 TGAATGTGGTCTCTGTTTTCTGAAAT 59.453 34.615 3.31 0.00 0.00 2.17
1330 1529 6.966534 ATGTGGTCTCTGTTTTCTGAAATT 57.033 33.333 3.31 0.00 0.00 1.82
1331 1530 6.773976 TGTGGTCTCTGTTTTCTGAAATTT 57.226 33.333 3.31 0.00 0.00 1.82
1332 1531 6.563422 TGTGGTCTCTGTTTTCTGAAATTTG 58.437 36.000 3.31 0.00 0.00 2.32
1333 1532 5.460091 GTGGTCTCTGTTTTCTGAAATTTGC 59.540 40.000 3.31 0.00 0.00 3.68
1334 1533 5.360714 TGGTCTCTGTTTTCTGAAATTTGCT 59.639 36.000 3.31 0.00 0.00 3.91
1335 1534 5.689068 GGTCTCTGTTTTCTGAAATTTGCTG 59.311 40.000 3.31 0.78 0.00 4.41
1336 1535 5.689068 GTCTCTGTTTTCTGAAATTTGCTGG 59.311 40.000 3.31 0.00 0.00 4.85
1337 1536 5.360714 TCTCTGTTTTCTGAAATTTGCTGGT 59.639 36.000 3.31 0.00 0.00 4.00
1338 1537 5.976458 TCTGTTTTCTGAAATTTGCTGGTT 58.024 33.333 3.31 0.00 0.00 3.67
1339 1538 5.811613 TCTGTTTTCTGAAATTTGCTGGTTG 59.188 36.000 3.31 0.00 0.00 3.77
1340 1539 4.332268 TGTTTTCTGAAATTTGCTGGTTGC 59.668 37.500 3.31 0.00 43.25 4.17
1341 1540 4.405116 TTTCTGAAATTTGCTGGTTGCT 57.595 36.364 0.00 0.00 43.37 3.91
1347 1546 1.122227 ATTTGCTGGTTGCTTGTGGT 58.878 45.000 0.00 0.00 43.37 4.16
1348 1547 0.459489 TTTGCTGGTTGCTTGTGGTC 59.541 50.000 0.00 0.00 43.37 4.02
1403 1602 1.066257 CTACGCCAAATGCATGGGC 59.934 57.895 25.43 25.43 44.27 5.36
1446 1645 1.675641 AGCGGATCCACAAGGCAAC 60.676 57.895 13.41 0.00 33.74 4.17
1475 1679 1.703411 CTCAGCTTTTTGTTCCCCCA 58.297 50.000 0.00 0.00 0.00 4.96
1481 1685 3.138304 GCTTTTTGTTCCCCCAAATGTC 58.862 45.455 0.00 0.00 34.50 3.06
1490 1694 3.664320 TCCCCCAAATGTCATAGCTCTA 58.336 45.455 0.00 0.00 0.00 2.43
1493 1697 4.763793 CCCCCAAATGTCATAGCTCTATTG 59.236 45.833 0.00 0.00 0.00 1.90
1516 1720 4.346129 GGATGAATTTGATGTGACTTCGC 58.654 43.478 0.00 0.00 0.00 4.70
1565 1769 5.236047 GGATCATGCTCTCAAATACAGTGTC 59.764 44.000 0.00 0.00 0.00 3.67
1602 1806 0.251341 GGAGGACATGTTTGCCCTGT 60.251 55.000 8.48 0.00 35.59 4.00
1646 1850 1.447140 GTCTATTGGCGCCGTGTCA 60.447 57.895 23.90 0.00 0.00 3.58
1775 1979 6.206634 TGCTTCTCGAAGAAATGGTAAAATGT 59.793 34.615 10.68 0.00 40.79 2.71
1776 1980 6.524586 GCTTCTCGAAGAAATGGTAAAATGTG 59.475 38.462 10.68 0.00 40.79 3.21
1777 1981 7.573096 GCTTCTCGAAGAAATGGTAAAATGTGA 60.573 37.037 10.68 0.00 40.79 3.58
1778 1982 7.737972 TCTCGAAGAAATGGTAAAATGTGAA 57.262 32.000 0.00 0.00 34.09 3.18
1797 2001 6.842163 TGTGAAGAGTTCAGTTTTTCTGTTC 58.158 36.000 0.00 0.00 43.97 3.18
1833 2037 0.109342 CCTGGTCTGGCAGAAACTGT 59.891 55.000 20.62 0.00 33.43 3.55
1857 2062 3.098636 GCTCACGTTGTCACTTTTGTTC 58.901 45.455 0.00 0.00 0.00 3.18
2100 2328 5.595257 ACGTTCCTAACTCCTTTCTATCC 57.405 43.478 0.00 0.00 0.00 2.59
2181 2409 2.099756 GTGGTTATGGGCTTGAATGAGC 59.900 50.000 0.00 0.00 41.96 4.26
2285 2519 6.254281 TGCTAGTTTTTGCCTCTTATTGTC 57.746 37.500 0.00 0.00 0.00 3.18
2289 2523 5.385198 AGTTTTTGCCTCTTATTGTCCTCA 58.615 37.500 0.00 0.00 0.00 3.86
2353 2587 4.695455 TGCACATTAGCTTTGTCCTAAGTC 59.305 41.667 0.00 0.00 34.99 3.01
2354 2588 4.695455 GCACATTAGCTTTGTCCTAAGTCA 59.305 41.667 0.00 0.00 0.00 3.41
2355 2589 5.181245 GCACATTAGCTTTGTCCTAAGTCAA 59.819 40.000 0.00 0.00 0.00 3.18
2358 2592 6.998673 ACATTAGCTTTGTCCTAAGTCAAACT 59.001 34.615 0.00 0.00 29.74 2.66
2360 2594 7.875327 TTAGCTTTGTCCTAAGTCAAACTTT 57.125 32.000 0.00 0.00 39.51 2.66
2361 2595 8.967664 TTAGCTTTGTCCTAAGTCAAACTTTA 57.032 30.769 0.00 0.00 39.51 1.85
2362 2596 9.569122 TTAGCTTTGTCCTAAGTCAAACTTTAT 57.431 29.630 0.00 0.00 39.51 1.40
2535 2769 6.858478 GGTTTGACTTGAGACAAAAGCTAATC 59.142 38.462 9.53 0.00 40.22 1.75
2739 2992 8.041323 GGAGTCTCCTGTAATGAAAGAAATGTA 58.959 37.037 12.02 0.00 32.53 2.29
2986 3248 7.064728 CACTTGTTTTAGAATGCTAGGTAGACC 59.935 40.741 0.00 0.00 0.00 3.85
2989 3251 5.511234 TTTAGAATGCTAGGTAGACCGTC 57.489 43.478 0.00 0.00 42.08 4.79
2991 3253 3.567397 AGAATGCTAGGTAGACCGTCAT 58.433 45.455 0.40 0.00 42.08 3.06
3054 3316 2.034104 TGTTCATCAGAGATGCCTGC 57.966 50.000 2.19 0.00 34.28 4.85
3074 3336 4.136796 TGCTGAGTTTTCTTATGCACAGT 58.863 39.130 0.00 0.00 0.00 3.55
3091 3353 4.322801 GCACAGTAATGTTCTCCTACCAGT 60.323 45.833 0.00 0.00 0.00 4.00
3102 3364 2.301870 CTCCTACCAGTAAACACCAGCA 59.698 50.000 0.00 0.00 0.00 4.41
3284 3547 2.435372 TGGGGATGGTGTTATTGCTC 57.565 50.000 0.00 0.00 0.00 4.26
3344 3607 1.229975 TGCACACACTGATGCGGAAG 61.230 55.000 5.83 0.00 45.13 3.46
3364 3627 3.403038 AGACAAACAGACCTTGAATCCG 58.597 45.455 0.00 0.00 0.00 4.18
3373 3636 1.420138 ACCTTGAATCCGACACCAACT 59.580 47.619 0.00 0.00 0.00 3.16
3375 3638 3.071892 ACCTTGAATCCGACACCAACTTA 59.928 43.478 0.00 0.00 0.00 2.24
3389 3652 4.704540 CACCAACTTATGATGCTTACCCAA 59.295 41.667 0.00 0.00 0.00 4.12
3401 3664 9.816354 ATGATGCTTACCCAAATACAAATTTAC 57.184 29.630 0.00 0.00 33.45 2.01
3402 3665 8.807118 TGATGCTTACCCAAATACAAATTTACA 58.193 29.630 0.00 0.00 33.45 2.41
3422 3685 4.536765 ACACATTTCAAAGACAGGGAAGT 58.463 39.130 0.00 0.00 0.00 3.01
3485 3748 0.392461 TTCGCAAGGTGCATACTCCC 60.392 55.000 0.61 0.00 45.36 4.30
3762 4052 6.148480 AGTTTATGTCAGCTTCATCACAGAAC 59.852 38.462 4.66 3.70 0.00 3.01
4038 4328 5.357257 ACTAGTTGCCGGTATATTCAGTTG 58.643 41.667 1.90 0.00 0.00 3.16
4064 4354 7.148255 GGCAAAGAGTGTTCACATATGATTACA 60.148 37.037 10.38 7.04 33.85 2.41
4209 4499 0.393077 AACTGGAACTAGCACTGCGT 59.607 50.000 0.00 0.00 0.00 5.24
4272 4562 6.870965 TCTTCTCTTCAGCAATACACTTTCTC 59.129 38.462 0.00 0.00 0.00 2.87
4326 4616 5.184864 TGAGAAGGAAGCAGTTGAACAAAAA 59.815 36.000 0.00 0.00 0.00 1.94
4335 4625 5.440260 CAGTTGAACAAAAACTGCAGAAC 57.560 39.130 23.35 10.79 45.68 3.01
4359 4649 9.584008 AACTCATATATTGCTCATTTGGATTCT 57.416 29.630 0.00 0.00 0.00 2.40
4482 4772 3.561310 CCCGTGTCATCTGGATAAACATG 59.439 47.826 0.00 0.00 0.00 3.21
4559 4863 2.418628 CGTGCGTGGAGATAAAACCAAT 59.581 45.455 0.00 0.00 37.94 3.16
4572 4876 9.574516 GAGATAAAACCAATATTGTATGTCCCT 57.425 33.333 14.25 4.19 0.00 4.20
4573 4877 9.354673 AGATAAAACCAATATTGTATGTCCCTG 57.645 33.333 14.25 0.00 0.00 4.45
4590 4894 2.159043 CCCTGCTGATGACTACAACGAT 60.159 50.000 0.00 0.00 0.00 3.73
4596 4900 6.515832 TGCTGATGACTACAACGATAATGAT 58.484 36.000 0.00 0.00 0.00 2.45
4648 4952 1.026718 CGGAGGGTCAAAGCCATCAC 61.027 60.000 0.00 0.00 40.76 3.06
4661 4965 0.036010 CCATCACCGAGCAAAGTCCT 60.036 55.000 0.00 0.00 0.00 3.85
4688 4992 0.740868 TGGAGCGCACAATACTCTGC 60.741 55.000 11.47 0.00 0.00 4.26
4722 5026 1.961277 CTGCCTGGTCAACACGGTC 60.961 63.158 0.00 0.00 0.00 4.79
4798 5102 0.606401 CTGTCCCAGCACCGAACAAT 60.606 55.000 0.00 0.00 0.00 2.71
4799 5103 0.605319 TGTCCCAGCACCGAACAATC 60.605 55.000 0.00 0.00 0.00 2.67
4836 5140 2.428171 GCATTTGAAAGCCATAGCCAGA 59.572 45.455 0.00 0.00 41.25 3.86
4839 5143 4.989279 TTTGAAAGCCATAGCCAGATTC 57.011 40.909 0.00 0.00 41.25 2.52
4842 5146 1.978454 AAGCCATAGCCAGATTCTGC 58.022 50.000 8.23 4.31 41.25 4.26
4854 5158 0.098376 GATTCTGCGCTTTCCAGCTG 59.902 55.000 9.73 6.78 44.85 4.24
4867 5171 1.975407 CAGCTGGCAAAGACCCTGG 60.975 63.158 5.57 0.00 0.00 4.45
4882 5186 1.302033 CTGGCAGACAACGGCTTCT 60.302 57.895 9.42 0.00 37.38 2.85
4914 5218 1.516423 GACGGTAAGTCTCAGGCCC 59.484 63.158 0.00 0.00 46.13 5.80
4918 5222 1.255667 GGTAAGTCTCAGGCCCGTGA 61.256 60.000 0.00 0.00 0.00 4.35
4954 5258 3.078836 CCGGTCCCGCCTCCTAAA 61.079 66.667 0.00 0.00 38.24 1.85
5015 5319 4.113354 GGTTCTACTATTCGGTGAAGCAG 58.887 47.826 0.00 0.00 35.85 4.24
5108 5430 0.613260 CCGTCTTCAACCTCATCCCA 59.387 55.000 0.00 0.00 0.00 4.37
5144 5466 1.658717 CTCCGCGTCGATGGATGAC 60.659 63.158 4.92 0.00 32.83 3.06
5212 5534 1.458639 AAGCTTGGCCTGCACTTGTC 61.459 55.000 20.23 0.00 0.00 3.18
5241 5564 1.632589 AGCTAAAGCCAAAACCTGGG 58.367 50.000 0.00 0.00 46.54 4.45
5247 5581 2.523902 CCAAAACCTGGGCCTGCA 60.524 61.111 4.53 0.00 42.17 4.41
5250 5584 3.086764 AAAACCTGGGCCTGCACCT 62.087 57.895 4.53 0.00 0.00 4.00
5261 5595 1.021390 CCTGCACCTTGGTCGATCAC 61.021 60.000 0.00 0.00 0.00 3.06
5268 5602 3.982372 TTGGTCGATCACGCTCGCC 62.982 63.158 0.00 4.23 38.52 5.54
5274 5608 2.586079 ATCACGCTCGCCGGAATG 60.586 61.111 5.05 0.00 42.52 2.67
5275 5609 2.954020 GATCACGCTCGCCGGAATGA 62.954 60.000 5.05 0.00 42.52 2.57
5276 5610 2.572095 ATCACGCTCGCCGGAATGAA 62.572 55.000 5.05 0.00 42.52 2.57
5277 5611 2.813908 ACGCTCGCCGGAATGAAC 60.814 61.111 5.05 0.00 42.52 3.18
5285 5619 0.451783 GCCGGAATGAACGCATCTTT 59.548 50.000 5.05 0.00 32.35 2.52
5297 5631 2.159653 ACGCATCTTTCGTTGCAAGATC 60.160 45.455 0.00 0.00 38.67 2.75
5347 5695 3.414700 GCCGTGTCAAGCTGGACG 61.415 66.667 16.52 6.06 40.72 4.79
5350 5698 3.414700 GTGTCAAGCTGGACGGCG 61.415 66.667 16.52 4.80 40.72 6.46
5354 5702 3.197790 CAAGCTGGACGGCGGATG 61.198 66.667 13.24 0.00 37.29 3.51
5357 5705 4.451150 GCTGGACGGCGGATGACA 62.451 66.667 13.24 1.30 0.00 3.58
5365 5713 2.512515 GCGGATGACAGACCAGGC 60.513 66.667 0.00 0.00 0.00 4.85
5378 5726 2.489275 CCAGGCGCCTTGTTGTTGT 61.489 57.895 30.60 0.00 0.00 3.32
5379 5727 1.437160 CAGGCGCCTTGTTGTTGTT 59.563 52.632 30.60 0.00 0.00 2.83
5380 5728 0.665835 CAGGCGCCTTGTTGTTGTTA 59.334 50.000 30.60 0.00 0.00 2.41
5382 5730 0.666374 GGCGCCTTGTTGTTGTTAGT 59.334 50.000 22.15 0.00 0.00 2.24
5384 5732 2.350102 GGCGCCTTGTTGTTGTTAGTAC 60.350 50.000 22.15 0.00 0.00 2.73
5391 5747 5.763204 CCTTGTTGTTGTTAGTACCTGTGAT 59.237 40.000 0.00 0.00 0.00 3.06
5464 5835 3.059352 ACAAAGTACACTGGATCTGGC 57.941 47.619 0.00 0.00 0.00 4.85
5511 5884 3.365265 GGTTGGTTGGCTGGCTCG 61.365 66.667 2.00 0.00 0.00 5.03
5545 5918 2.033492 GGTGTTCGTCGTGTTAACCAAG 60.033 50.000 2.48 0.00 0.00 3.61
5546 5919 1.593933 TGTTCGTCGTGTTAACCAAGC 59.406 47.619 2.48 0.00 0.00 4.01
5547 5920 1.593933 GTTCGTCGTGTTAACCAAGCA 59.406 47.619 2.48 0.00 0.00 3.91
5548 5921 1.210870 TCGTCGTGTTAACCAAGCAC 58.789 50.000 2.48 0.00 0.00 4.40
5550 5923 4.507794 CGTGTTAACCAAGCACGC 57.492 55.556 2.48 0.00 46.86 5.34
5551 5924 1.644372 CGTGTTAACCAAGCACGCA 59.356 52.632 2.48 0.00 46.86 5.24
5552 5925 0.656205 CGTGTTAACCAAGCACGCAC 60.656 55.000 2.48 0.00 46.86 5.34
5578 5951 4.210537 ACGCACGGCTTATTATATTCACAC 59.789 41.667 0.00 0.00 0.00 3.82
5579 5952 4.210328 CGCACGGCTTATTATATTCACACA 59.790 41.667 0.00 0.00 0.00 3.72
5581 5954 6.136071 GCACGGCTTATTATATTCACACAAG 58.864 40.000 0.00 0.00 0.00 3.16
5616 5991 8.907222 AATTAATTTGTTGCAAAATCTGGAGT 57.093 26.923 0.00 0.00 0.00 3.85
5629 6004 4.857251 GGAGTGCCTACCATTCCG 57.143 61.111 0.00 0.00 40.06 4.30
5656 6069 6.921857 GGCAAACCTTTTGATATCATCATCAG 59.078 38.462 6.17 0.00 39.39 2.90
5658 6071 8.192774 GCAAACCTTTTGATATCATCATCAGAA 58.807 33.333 6.17 0.00 39.39 3.02
5716 6129 1.213296 AGTGTATCCTCCGCCCAAAT 58.787 50.000 0.00 0.00 0.00 2.32
5717 6130 1.134098 AGTGTATCCTCCGCCCAAATG 60.134 52.381 0.00 0.00 0.00 2.32
5721 6134 2.459555 ATCCTCCGCCCAAATGATTT 57.540 45.000 0.00 0.00 0.00 2.17
5722 6135 1.473258 TCCTCCGCCCAAATGATTTG 58.527 50.000 10.84 10.84 40.32 2.32
5723 6136 1.185315 CCTCCGCCCAAATGATTTGT 58.815 50.000 15.93 0.00 38.98 2.83
5724 6137 2.025793 TCCTCCGCCCAAATGATTTGTA 60.026 45.455 15.93 0.00 38.98 2.41
5727 6140 4.322349 CCTCCGCCCAAATGATTTGTAAAA 60.322 41.667 15.93 0.00 38.98 1.52
5728 6141 5.215252 TCCGCCCAAATGATTTGTAAAAA 57.785 34.783 15.93 0.00 38.98 1.94
5729 6142 5.799213 TCCGCCCAAATGATTTGTAAAAAT 58.201 33.333 15.93 0.00 38.98 1.82
5730 6143 6.936279 TCCGCCCAAATGATTTGTAAAAATA 58.064 32.000 15.93 0.00 38.98 1.40
5731 6144 7.560368 TCCGCCCAAATGATTTGTAAAAATAT 58.440 30.769 15.93 0.00 38.98 1.28
5732 6145 8.696374 TCCGCCCAAATGATTTGTAAAAATATA 58.304 29.630 15.93 0.00 38.98 0.86
5734 6147 9.307121 CGCCCAAATGATTTGTAAAAATATACA 57.693 29.630 15.93 0.00 38.98 2.29
5761 6174 3.086282 GCCCAACGGAAAGGAAATCTTA 58.914 45.455 0.00 0.00 34.78 2.10
5762 6175 3.699538 GCCCAACGGAAAGGAAATCTTAT 59.300 43.478 0.00 0.00 34.78 1.73
5763 6176 4.202020 GCCCAACGGAAAGGAAATCTTATC 60.202 45.833 0.00 0.00 34.78 1.75
5764 6177 4.035208 CCCAACGGAAAGGAAATCTTATCG 59.965 45.833 0.00 0.00 37.19 2.92
5765 6178 4.873827 CCAACGGAAAGGAAATCTTATCGA 59.126 41.667 0.00 0.00 36.02 3.59
5768 6181 5.116882 ACGGAAAGGAAATCTTATCGAAGG 58.883 41.667 0.00 0.00 36.02 3.46
5769 6182 4.024809 CGGAAAGGAAATCTTATCGAAGGC 60.025 45.833 0.00 0.00 34.93 4.35
5770 6183 5.126779 GGAAAGGAAATCTTATCGAAGGCT 58.873 41.667 0.00 0.00 34.78 4.58
5771 6184 6.289064 GGAAAGGAAATCTTATCGAAGGCTA 58.711 40.000 0.00 0.00 34.78 3.93
5772 6185 6.937465 GGAAAGGAAATCTTATCGAAGGCTAT 59.063 38.462 0.00 0.00 34.78 2.97
5799 6218 6.882610 AGTTTATGAAGATGAGCAACAACA 57.117 33.333 0.00 0.00 0.00 3.33
5813 6232 1.453155 ACAACAATCCTAGCCGCAAG 58.547 50.000 0.00 0.00 0.00 4.01
5826 6245 1.913403 GCCGCAAGAAACAAATCATCG 59.087 47.619 0.00 0.00 43.02 3.84
5833 6252 3.679389 AGAAACAAATCATCGACCAGCT 58.321 40.909 0.00 0.00 0.00 4.24
5837 6256 2.941064 ACAAATCATCGACCAGCTGATG 59.059 45.455 17.39 11.10 42.61 3.07
5847 6266 3.374506 CAGCTGATGGAGAATGCGA 57.625 52.632 8.42 0.00 0.00 5.10
5848 6267 0.935898 CAGCTGATGGAGAATGCGAC 59.064 55.000 8.42 0.00 0.00 5.19
5849 6268 0.529337 AGCTGATGGAGAATGCGACG 60.529 55.000 0.00 0.00 0.00 5.12
5850 6269 0.528466 GCTGATGGAGAATGCGACGA 60.528 55.000 0.00 0.00 0.00 4.20
5851 6270 1.203928 CTGATGGAGAATGCGACGAC 58.796 55.000 0.00 0.00 0.00 4.34
5852 6271 0.525455 TGATGGAGAATGCGACGACG 60.525 55.000 2.12 2.12 42.93 5.12
5853 6272 0.248498 GATGGAGAATGCGACGACGA 60.248 55.000 12.29 0.00 42.66 4.20
5854 6273 0.172578 ATGGAGAATGCGACGACGAA 59.827 50.000 12.29 0.00 42.66 3.85
5855 6274 0.731514 TGGAGAATGCGACGACGAAC 60.732 55.000 12.29 0.00 42.66 3.95
5856 6275 0.731514 GGAGAATGCGACGACGAACA 60.732 55.000 12.29 0.28 42.66 3.18
5857 6276 0.362512 GAGAATGCGACGACGAACAC 59.637 55.000 12.29 0.00 42.66 3.32
5858 6277 0.318360 AGAATGCGACGACGAACACA 60.318 50.000 12.29 0.00 42.66 3.72
5859 6278 0.179282 GAATGCGACGACGAACACAC 60.179 55.000 12.29 0.00 42.66 3.82
5860 6279 0.872451 AATGCGACGACGAACACACA 60.872 50.000 12.29 0.00 42.66 3.72
5861 6280 0.872451 ATGCGACGACGAACACACAA 60.872 50.000 12.29 0.00 42.66 3.33
5862 6281 1.198397 GCGACGACGAACACACAAG 59.802 57.895 12.29 0.00 42.66 3.16
5863 6282 1.204228 GCGACGACGAACACACAAGA 61.204 55.000 12.29 0.00 42.66 3.02
5864 6283 1.193644 CGACGACGAACACACAAGAA 58.806 50.000 0.00 0.00 42.66 2.52
5865 6284 1.584761 CGACGACGAACACACAAGAAA 59.415 47.619 0.00 0.00 42.66 2.52
5866 6285 2.346376 CGACGACGAACACACAAGAAAG 60.346 50.000 0.00 0.00 42.66 2.62
5867 6286 2.601763 GACGACGAACACACAAGAAAGT 59.398 45.455 0.00 0.00 0.00 2.66
5868 6287 3.772932 ACGACGAACACACAAGAAAGTA 58.227 40.909 0.00 0.00 0.00 2.24
5869 6288 4.365723 ACGACGAACACACAAGAAAGTAT 58.634 39.130 0.00 0.00 0.00 2.12
5870 6289 5.522456 ACGACGAACACACAAGAAAGTATA 58.478 37.500 0.00 0.00 0.00 1.47
5871 6290 5.978919 ACGACGAACACACAAGAAAGTATAA 59.021 36.000 0.00 0.00 0.00 0.98
5872 6291 6.143438 ACGACGAACACACAAGAAAGTATAAG 59.857 38.462 0.00 0.00 0.00 1.73
5873 6292 6.361481 CGACGAACACACAAGAAAGTATAAGA 59.639 38.462 0.00 0.00 0.00 2.10
5874 6293 7.096353 CGACGAACACACAAGAAAGTATAAGAA 60.096 37.037 0.00 0.00 0.00 2.52
5875 6294 8.073355 ACGAACACACAAGAAAGTATAAGAAG 57.927 34.615 0.00 0.00 0.00 2.85
5876 6295 7.170998 ACGAACACACAAGAAAGTATAAGAAGG 59.829 37.037 0.00 0.00 0.00 3.46
5877 6296 7.384115 CGAACACACAAGAAAGTATAAGAAGGA 59.616 37.037 0.00 0.00 0.00 3.36
5878 6297 9.220767 GAACACACAAGAAAGTATAAGAAGGAT 57.779 33.333 0.00 0.00 0.00 3.24
5930 6349 8.483307 TTGTGTTAGTAGTAATCGATTTTCCC 57.517 34.615 17.19 2.91 0.00 3.97
5931 6350 7.844009 TGTGTTAGTAGTAATCGATTTTCCCT 58.156 34.615 17.19 10.09 0.00 4.20
5932 6351 7.977853 TGTGTTAGTAGTAATCGATTTTCCCTC 59.022 37.037 17.19 3.21 0.00 4.30
5933 6352 7.977853 GTGTTAGTAGTAATCGATTTTCCCTCA 59.022 37.037 17.19 4.55 0.00 3.86
5934 6353 7.977853 TGTTAGTAGTAATCGATTTTCCCTCAC 59.022 37.037 17.19 6.41 0.00 3.51
5935 6354 6.540438 AGTAGTAATCGATTTTCCCTCACA 57.460 37.500 17.19 0.00 0.00 3.58
5936 6355 6.942976 AGTAGTAATCGATTTTCCCTCACAA 58.057 36.000 17.19 0.00 0.00 3.33
5937 6356 7.042335 AGTAGTAATCGATTTTCCCTCACAAG 58.958 38.462 17.19 0.00 0.00 3.16
5938 6357 6.049955 AGTAATCGATTTTCCCTCACAAGA 57.950 37.500 17.19 0.00 0.00 3.02
5939 6358 6.472887 AGTAATCGATTTTCCCTCACAAGAA 58.527 36.000 17.19 0.00 0.00 2.52
5940 6359 5.886960 AATCGATTTTCCCTCACAAGAAG 57.113 39.130 4.39 0.00 0.00 2.85
5941 6360 4.617253 TCGATTTTCCCTCACAAGAAGA 57.383 40.909 0.00 0.00 0.00 2.87
5942 6361 4.968259 TCGATTTTCCCTCACAAGAAGAA 58.032 39.130 0.00 0.00 0.00 2.52
5943 6362 5.373222 TCGATTTTCCCTCACAAGAAGAAA 58.627 37.500 0.00 0.00 0.00 2.52
5944 6363 5.825679 TCGATTTTCCCTCACAAGAAGAAAA 59.174 36.000 0.00 0.00 38.15 2.29
5945 6364 6.017109 TCGATTTTCCCTCACAAGAAGAAAAG 60.017 38.462 0.00 0.00 37.67 2.27
5946 6365 6.017109 CGATTTTCCCTCACAAGAAGAAAAGA 60.017 38.462 0.00 0.00 37.67 2.52
5947 6366 7.468631 CGATTTTCCCTCACAAGAAGAAAAGAA 60.469 37.037 0.00 0.00 37.67 2.52
5948 6367 7.475137 TTTTCCCTCACAAGAAGAAAAGAAA 57.525 32.000 0.00 0.00 33.41 2.52
5949 6368 7.660030 TTTCCCTCACAAGAAGAAAAGAAAT 57.340 32.000 0.00 0.00 0.00 2.17
5950 6369 8.760980 TTTCCCTCACAAGAAGAAAAGAAATA 57.239 30.769 0.00 0.00 0.00 1.40
5951 6370 7.986085 TCCCTCACAAGAAGAAAAGAAATAG 57.014 36.000 0.00 0.00 0.00 1.73
5952 6371 6.942576 TCCCTCACAAGAAGAAAAGAAATAGG 59.057 38.462 0.00 0.00 0.00 2.57
5953 6372 6.942576 CCCTCACAAGAAGAAAAGAAATAGGA 59.057 38.462 0.00 0.00 0.00 2.94
5954 6373 7.120432 CCCTCACAAGAAGAAAAGAAATAGGAG 59.880 40.741 0.00 0.00 0.00 3.69
5955 6374 7.663493 CCTCACAAGAAGAAAAGAAATAGGAGT 59.337 37.037 0.00 0.00 0.00 3.85
5956 6375 9.712305 CTCACAAGAAGAAAAGAAATAGGAGTA 57.288 33.333 0.00 0.00 0.00 2.59
5984 6403 9.344772 ACAGGAATGTATACTAGACTAGACTTG 57.655 37.037 16.55 0.90 0.00 3.16
5985 6404 9.562408 CAGGAATGTATACTAGACTAGACTTGA 57.438 37.037 16.55 0.00 0.00 3.02
5986 6405 9.563748 AGGAATGTATACTAGACTAGACTTGAC 57.436 37.037 16.55 7.05 0.00 3.18
5987 6406 8.785946 GGAATGTATACTAGACTAGACTTGACC 58.214 40.741 16.55 6.17 0.00 4.02
5988 6407 9.339850 GAATGTATACTAGACTAGACTTGACCA 57.660 37.037 16.55 4.02 0.00 4.02
5989 6408 9.696572 AATGTATACTAGACTAGACTTGACCAA 57.303 33.333 16.55 0.00 0.00 3.67
5990 6409 9.869667 ATGTATACTAGACTAGACTTGACCAAT 57.130 33.333 16.55 0.00 0.00 3.16
5991 6410 9.696572 TGTATACTAGACTAGACTTGACCAATT 57.303 33.333 16.55 0.00 0.00 2.32
5993 6412 6.532988 ACTAGACTAGACTTGACCAATTCC 57.467 41.667 16.55 0.00 0.00 3.01
5994 6413 6.017192 ACTAGACTAGACTTGACCAATTCCA 58.983 40.000 16.55 0.00 0.00 3.53
5995 6414 6.670027 ACTAGACTAGACTTGACCAATTCCAT 59.330 38.462 16.55 0.00 0.00 3.41
5996 6415 6.380079 AGACTAGACTTGACCAATTCCATT 57.620 37.500 0.00 0.00 0.00 3.16
5997 6416 6.176183 AGACTAGACTTGACCAATTCCATTG 58.824 40.000 0.00 0.00 39.94 2.82
5998 6417 4.702131 ACTAGACTTGACCAATTCCATTGC 59.298 41.667 0.00 0.00 38.92 3.56
5999 6418 3.771216 AGACTTGACCAATTCCATTGCT 58.229 40.909 0.00 0.00 38.92 3.91
6000 6419 3.508793 AGACTTGACCAATTCCATTGCTG 59.491 43.478 0.00 0.00 38.92 4.41
6001 6420 2.564062 ACTTGACCAATTCCATTGCTGG 59.436 45.455 0.00 0.00 44.64 4.85
6002 6421 1.559368 TGACCAATTCCATTGCTGGG 58.441 50.000 0.00 0.00 43.34 4.45
6003 6422 1.076841 TGACCAATTCCATTGCTGGGA 59.923 47.619 0.00 0.00 43.34 4.37
6005 6424 2.167075 GACCAATTCCATTGCTGGGAAG 59.833 50.000 9.54 1.02 46.85 3.46
6006 6425 2.181975 CCAATTCCATTGCTGGGAAGT 58.818 47.619 9.54 4.99 46.85 3.01
6007 6426 2.568509 CCAATTCCATTGCTGGGAAGTT 59.431 45.455 9.54 3.43 46.85 2.66
6008 6427 3.592059 CAATTCCATTGCTGGGAAGTTG 58.408 45.455 9.54 9.63 46.85 3.16
6009 6428 2.380064 TTCCATTGCTGGGAAGTTGT 57.620 45.000 0.00 0.00 43.34 3.32
6010 6429 1.909700 TCCATTGCTGGGAAGTTGTC 58.090 50.000 0.00 0.00 43.34 3.18
6011 6430 0.523072 CCATTGCTGGGAAGTTGTCG 59.477 55.000 0.00 0.00 39.04 4.35
6012 6431 1.522668 CATTGCTGGGAAGTTGTCGA 58.477 50.000 0.00 0.00 0.00 4.20
6013 6432 1.197721 CATTGCTGGGAAGTTGTCGAC 59.802 52.381 9.11 9.11 0.00 4.20
6014 6433 0.179234 TTGCTGGGAAGTTGTCGACA 59.821 50.000 15.76 15.76 0.00 4.35
6015 6434 0.531974 TGCTGGGAAGTTGTCGACAC 60.532 55.000 19.90 13.51 0.00 3.67
6016 6435 1.557443 GCTGGGAAGTTGTCGACACG 61.557 60.000 19.90 3.74 0.00 4.49
6017 6436 1.557443 CTGGGAAGTTGTCGACACGC 61.557 60.000 19.90 15.26 0.00 5.34
6018 6437 2.315386 GGGAAGTTGTCGACACGCC 61.315 63.158 19.90 16.06 0.00 5.68
6019 6438 1.300697 GGAAGTTGTCGACACGCCT 60.301 57.895 19.90 11.63 0.00 5.52
6020 6439 0.878961 GGAAGTTGTCGACACGCCTT 60.879 55.000 19.90 19.27 0.00 4.35
6021 6440 0.935196 GAAGTTGTCGACACGCCTTT 59.065 50.000 19.90 8.23 0.00 3.11
6022 6441 2.129607 GAAGTTGTCGACACGCCTTTA 58.870 47.619 19.90 0.00 0.00 1.85
6023 6442 2.450609 AGTTGTCGACACGCCTTTAT 57.549 45.000 19.90 0.00 0.00 1.40
6024 6443 2.762745 AGTTGTCGACACGCCTTTATT 58.237 42.857 19.90 0.00 0.00 1.40
6025 6444 3.916761 AGTTGTCGACACGCCTTTATTA 58.083 40.909 19.90 0.00 0.00 0.98
6026 6445 4.501071 AGTTGTCGACACGCCTTTATTAT 58.499 39.130 19.90 0.00 0.00 1.28
6027 6446 5.653507 AGTTGTCGACACGCCTTTATTATA 58.346 37.500 19.90 0.00 0.00 0.98
6028 6447 6.278363 AGTTGTCGACACGCCTTTATTATAT 58.722 36.000 19.90 0.00 0.00 0.86
6029 6448 6.759827 AGTTGTCGACACGCCTTTATTATATT 59.240 34.615 19.90 0.00 0.00 1.28
6030 6449 7.922278 AGTTGTCGACACGCCTTTATTATATTA 59.078 33.333 19.90 0.00 0.00 0.98
6031 6450 8.706035 GTTGTCGACACGCCTTTATTATATTAT 58.294 33.333 19.90 0.00 0.00 1.28
6032 6451 9.911138 TTGTCGACACGCCTTTATTATATTATA 57.089 29.630 19.90 0.00 0.00 0.98
6072 6491 3.902261 CAGCTGTGCTTGATGTTGTAA 57.098 42.857 5.25 0.00 36.40 2.41
6073 6492 4.430137 CAGCTGTGCTTGATGTTGTAAT 57.570 40.909 5.25 0.00 36.40 1.89
6074 6493 5.550232 CAGCTGTGCTTGATGTTGTAATA 57.450 39.130 5.25 0.00 36.40 0.98
6075 6494 5.941733 CAGCTGTGCTTGATGTTGTAATAA 58.058 37.500 5.25 0.00 36.40 1.40
6076 6495 6.558009 CAGCTGTGCTTGATGTTGTAATAAT 58.442 36.000 5.25 0.00 36.40 1.28
6077 6496 6.471198 CAGCTGTGCTTGATGTTGTAATAATG 59.529 38.462 5.25 0.00 36.40 1.90
6078 6497 5.745294 GCTGTGCTTGATGTTGTAATAATGG 59.255 40.000 0.00 0.00 0.00 3.16
6079 6498 6.625740 GCTGTGCTTGATGTTGTAATAATGGT 60.626 38.462 0.00 0.00 0.00 3.55
6080 6499 7.415095 GCTGTGCTTGATGTTGTAATAATGGTA 60.415 37.037 0.00 0.00 0.00 3.25
6081 6500 8.341892 TGTGCTTGATGTTGTAATAATGGTAA 57.658 30.769 0.00 0.00 0.00 2.85
6082 6501 8.965819 TGTGCTTGATGTTGTAATAATGGTAAT 58.034 29.630 0.00 0.00 0.00 1.89
6083 6502 9.801873 GTGCTTGATGTTGTAATAATGGTAATT 57.198 29.630 0.00 0.00 0.00 1.40
6133 6552 9.341899 GAAAAGGAAAAAGAAAAAGAAAAAGGC 57.658 29.630 0.00 0.00 0.00 4.35
6134 6553 6.662414 AGGAAAAAGAAAAAGAAAAAGGCG 57.338 33.333 0.00 0.00 0.00 5.52
6135 6554 6.170506 AGGAAAAAGAAAAAGAAAAAGGCGT 58.829 32.000 0.00 0.00 0.00 5.68
6136 6555 6.312918 AGGAAAAAGAAAAAGAAAAAGGCGTC 59.687 34.615 0.00 0.00 0.00 5.19
6137 6556 6.417191 AAAAAGAAAAAGAAAAAGGCGTCC 57.583 33.333 0.00 0.00 0.00 4.79
6138 6557 3.728076 AGAAAAAGAAAAAGGCGTCCC 57.272 42.857 0.00 0.00 0.00 4.46
6139 6558 3.028130 AGAAAAAGAAAAAGGCGTCCCA 58.972 40.909 0.00 0.00 0.00 4.37
6140 6559 3.641436 AGAAAAAGAAAAAGGCGTCCCAT 59.359 39.130 0.00 0.00 0.00 4.00
6141 6560 3.660501 AAAAGAAAAAGGCGTCCCATC 57.339 42.857 0.00 0.00 0.00 3.51
6142 6561 1.545841 AAGAAAAAGGCGTCCCATCC 58.454 50.000 0.00 0.00 0.00 3.51
6143 6562 0.404040 AGAAAAAGGCGTCCCATCCA 59.596 50.000 0.00 0.00 0.00 3.41
6144 6563 0.811281 GAAAAAGGCGTCCCATCCAG 59.189 55.000 0.00 0.00 0.00 3.86
6145 6564 1.250840 AAAAAGGCGTCCCATCCAGC 61.251 55.000 0.00 0.00 0.00 4.85
6146 6565 2.424842 AAAAGGCGTCCCATCCAGCA 62.425 55.000 0.00 0.00 0.00 4.41
6147 6566 2.826777 AAAGGCGTCCCATCCAGCAG 62.827 60.000 0.00 0.00 0.00 4.24
6149 6568 4.479993 GCGTCCCATCCAGCAGCT 62.480 66.667 0.00 0.00 0.00 4.24
6150 6569 2.513204 CGTCCCATCCAGCAGCTG 60.513 66.667 16.23 16.23 0.00 4.24
6151 6570 2.673523 GTCCCATCCAGCAGCTGT 59.326 61.111 21.26 0.04 0.00 4.40
6152 6571 1.748122 GTCCCATCCAGCAGCTGTG 60.748 63.158 21.26 13.29 0.00 3.66
6153 6572 2.226315 TCCCATCCAGCAGCTGTGT 61.226 57.895 21.26 6.31 0.00 3.72
6154 6573 2.044555 CCCATCCAGCAGCTGTGTG 61.045 63.158 21.26 17.37 0.00 3.82
6155 6574 2.697761 CCATCCAGCAGCTGTGTGC 61.698 63.158 21.26 0.71 44.35 4.57
6156 6575 2.360852 ATCCAGCAGCTGTGTGCC 60.361 61.111 21.26 0.00 45.20 5.01
6157 6576 4.994471 TCCAGCAGCTGTGTGCCG 62.994 66.667 21.26 4.74 45.20 5.69
6159 6578 4.021631 CAGCAGCTGTGTGCCGTG 62.022 66.667 16.64 0.00 45.20 4.94
6162 6581 3.282157 CAGCTGTGTGCCGTGCTT 61.282 61.111 5.25 0.00 44.23 3.91
6163 6582 2.974698 AGCTGTGTGCCGTGCTTC 60.975 61.111 0.00 0.00 44.23 3.86
6164 6583 2.974698 GCTGTGTGCCGTGCTTCT 60.975 61.111 0.00 0.00 35.15 2.85
6165 6584 2.546494 GCTGTGTGCCGTGCTTCTT 61.546 57.895 0.00 0.00 35.15 2.52
6166 6585 1.571460 CTGTGTGCCGTGCTTCTTC 59.429 57.895 0.00 0.00 0.00 2.87
6167 6586 0.882042 CTGTGTGCCGTGCTTCTTCT 60.882 55.000 0.00 0.00 0.00 2.85
6168 6587 0.880278 TGTGTGCCGTGCTTCTTCTC 60.880 55.000 0.00 0.00 0.00 2.87
6169 6588 0.601311 GTGTGCCGTGCTTCTTCTCT 60.601 55.000 0.00 0.00 0.00 3.10
6170 6589 0.319900 TGTGCCGTGCTTCTTCTCTC 60.320 55.000 0.00 0.00 0.00 3.20
6171 6590 1.016653 GTGCCGTGCTTCTTCTCTCC 61.017 60.000 0.00 0.00 0.00 3.71
6172 6591 1.448717 GCCGTGCTTCTTCTCTCCC 60.449 63.158 0.00 0.00 0.00 4.30
6173 6592 1.219393 CCGTGCTTCTTCTCTCCCC 59.781 63.158 0.00 0.00 0.00 4.81
6174 6593 1.261238 CCGTGCTTCTTCTCTCCCCT 61.261 60.000 0.00 0.00 0.00 4.79
6175 6594 0.174617 CGTGCTTCTTCTCTCCCCTC 59.825 60.000 0.00 0.00 0.00 4.30
6176 6595 0.174617 GTGCTTCTTCTCTCCCCTCG 59.825 60.000 0.00 0.00 0.00 4.63
6177 6596 1.142965 GCTTCTTCTCTCCCCTCGC 59.857 63.158 0.00 0.00 0.00 5.03
6178 6597 1.326951 GCTTCTTCTCTCCCCTCGCT 61.327 60.000 0.00 0.00 0.00 4.93
6179 6598 0.744281 CTTCTTCTCTCCCCTCGCTC 59.256 60.000 0.00 0.00 0.00 5.03
6180 6599 0.684805 TTCTTCTCTCCCCTCGCTCC 60.685 60.000 0.00 0.00 0.00 4.70
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.534533 GGGTTCCCTTGTCCCCCT 60.535 66.667 0.00 0.00 35.52 4.79
35 36 2.359107 GGGTTCGGGTTCGGGTTC 60.359 66.667 0.00 0.00 36.95 3.62
36 37 4.318949 CGGGTTCGGGTTCGGGTT 62.319 66.667 0.00 0.00 36.95 4.11
38 39 4.446413 CTCGGGTTCGGGTTCGGG 62.446 72.222 0.00 0.00 36.95 5.14
39 40 2.934570 TTCTCGGGTTCGGGTTCGG 61.935 63.158 0.00 0.00 38.21 4.30
40 41 1.735559 GTTCTCGGGTTCGGGTTCG 60.736 63.158 0.00 0.00 38.21 3.95
118 119 1.369625 GCTGTTGACGAATAGGGTGG 58.630 55.000 0.00 0.00 0.00 4.61
119 120 1.369625 GGCTGTTGACGAATAGGGTG 58.630 55.000 0.00 0.00 0.00 4.61
120 121 0.252197 GGGCTGTTGACGAATAGGGT 59.748 55.000 0.00 0.00 0.00 4.34
170 171 3.055385 GTGATACTACCAACAGGCTGGAA 60.055 47.826 20.34 0.00 38.96 3.53
392 396 5.305585 AGAAAATTACAGCAAAGTCTCGGA 58.694 37.500 0.00 0.00 0.00 4.55
404 408 8.614469 AACAAAGAGAGGAGAGAAAATTACAG 57.386 34.615 0.00 0.00 0.00 2.74
409 413 7.682981 GCAACAAACAAAGAGAGGAGAGAAAAT 60.683 37.037 0.00 0.00 0.00 1.82
413 417 4.130118 GCAACAAACAAAGAGAGGAGAGA 58.870 43.478 0.00 0.00 0.00 3.10
414 418 3.879295 TGCAACAAACAAAGAGAGGAGAG 59.121 43.478 0.00 0.00 0.00 3.20
415 419 3.884895 TGCAACAAACAAAGAGAGGAGA 58.115 40.909 0.00 0.00 0.00 3.71
416 420 4.354587 GTTGCAACAAACAAAGAGAGGAG 58.645 43.478 24.52 0.00 0.00 3.69
420 424 4.016444 AGAGGTTGCAACAAACAAAGAGA 58.984 39.130 29.55 0.00 0.00 3.10
421 425 4.107622 CAGAGGTTGCAACAAACAAAGAG 58.892 43.478 29.55 6.69 0.00 2.85
422 426 3.119173 CCAGAGGTTGCAACAAACAAAGA 60.119 43.478 29.55 0.00 0.00 2.52
423 427 3.119173 TCCAGAGGTTGCAACAAACAAAG 60.119 43.478 29.55 12.38 0.00 2.77
424 428 2.828520 TCCAGAGGTTGCAACAAACAAA 59.171 40.909 29.55 9.11 0.00 2.83
425 429 2.451490 TCCAGAGGTTGCAACAAACAA 58.549 42.857 29.55 8.60 0.00 2.83
502 508 7.453393 TGCAAGAATATCTATAACCAAGGAGG 58.547 38.462 0.00 0.00 45.67 4.30
543 549 9.936759 TTCTTGTACAATCACAGTTCATATACA 57.063 29.630 9.13 0.00 0.00 2.29
550 556 5.858581 GCCATTTCTTGTACAATCACAGTTC 59.141 40.000 9.13 0.00 0.00 3.01
555 590 5.183904 AGAAGGCCATTTCTTGTACAATCAC 59.816 40.000 9.13 0.00 33.74 3.06
623 660 3.771798 TCGTTTTGGTTTTACTGGCAAC 58.228 40.909 0.00 0.00 0.00 4.17
625 662 4.657436 AATCGTTTTGGTTTTACTGGCA 57.343 36.364 0.00 0.00 0.00 4.92
626 663 5.977171 AAAATCGTTTTGGTTTTACTGGC 57.023 34.783 0.00 0.00 0.00 4.85
653 702 5.988310 TGTTATTCCTCTGTTCTAACGGA 57.012 39.130 4.40 4.40 41.78 4.69
769 955 8.992073 GTTATTTTACTTCCGTGGACTTTTCTA 58.008 33.333 0.00 0.00 0.00 2.10
816 1002 2.447572 TCCCACCTGCCAGTGACA 60.448 61.111 4.85 0.00 40.34 3.58
836 1022 4.101448 GGGGACGGCTGACATGCT 62.101 66.667 0.00 0.00 0.00 3.79
848 1034 1.302366 AAAGTGAAAACGACGGGGAC 58.698 50.000 0.00 0.00 0.00 4.46
873 1059 2.740447 GGCGTGATTTTTACTCCGTTCT 59.260 45.455 0.00 0.00 0.00 3.01
879 1066 1.132453 GGCCAGGCGTGATTTTTACTC 59.868 52.381 8.24 0.00 0.00 2.59
1095 1294 1.189524 TTACTGGACTGGACGGGGTG 61.190 60.000 0.00 0.00 0.00 4.61
1096 1295 0.252558 ATTACTGGACTGGACGGGGT 60.253 55.000 0.00 0.00 0.00 4.95
1097 1296 0.464452 GATTACTGGACTGGACGGGG 59.536 60.000 0.00 0.00 0.00 5.73
1098 1297 1.409427 GAGATTACTGGACTGGACGGG 59.591 57.143 0.00 0.00 0.00 5.28
1099 1298 1.065701 CGAGATTACTGGACTGGACGG 59.934 57.143 0.00 0.00 0.00 4.79
1100 1299 1.743958 ACGAGATTACTGGACTGGACG 59.256 52.381 0.00 0.00 0.00 4.79
1101 1300 2.223294 CGACGAGATTACTGGACTGGAC 60.223 54.545 0.00 0.00 0.00 4.02
1102 1301 2.014857 CGACGAGATTACTGGACTGGA 58.985 52.381 0.00 0.00 0.00 3.86
1103 1302 1.065701 CCGACGAGATTACTGGACTGG 59.934 57.143 0.00 0.00 0.00 4.00
1104 1303 1.534175 GCCGACGAGATTACTGGACTG 60.534 57.143 0.00 0.00 0.00 3.51
1105 1304 0.739561 GCCGACGAGATTACTGGACT 59.260 55.000 0.00 0.00 0.00 3.85
1132 1331 2.747855 GGCGAGGTTCAGCAAGGG 60.748 66.667 0.00 0.00 34.54 3.95
1140 1339 1.491505 GCAGATTAGCGGCGAGGTTC 61.492 60.000 12.98 1.15 0.00 3.62
1275 1474 2.413837 CGCGGAGAGGAAGAAGAAAAA 58.586 47.619 0.00 0.00 0.00 1.94
1276 1475 1.939838 GCGCGGAGAGGAAGAAGAAAA 60.940 52.381 8.83 0.00 0.00 2.29
1277 1476 0.389948 GCGCGGAGAGGAAGAAGAAA 60.390 55.000 8.83 0.00 0.00 2.52
1280 1479 2.202810 GGCGCGGAGAGGAAGAAG 60.203 66.667 8.83 0.00 0.00 2.85
1292 1491 2.021793 CATTCATCACACGGCGCG 59.978 61.111 6.90 0.00 0.00 6.86
1302 1501 5.702670 TCAGAAAACAGAGACCACATTCATC 59.297 40.000 0.00 0.00 0.00 2.92
1305 1504 6.377327 TTTCAGAAAACAGAGACCACATTC 57.623 37.500 0.00 0.00 0.00 2.67
1306 1505 6.966534 ATTTCAGAAAACAGAGACCACATT 57.033 33.333 0.00 0.00 0.00 2.71
1309 1508 5.460091 GCAAATTTCAGAAAACAGAGACCAC 59.540 40.000 0.00 0.00 0.00 4.16
1312 1511 5.689068 CCAGCAAATTTCAGAAAACAGAGAC 59.311 40.000 0.00 0.00 0.00 3.36
1314 1513 5.594926 ACCAGCAAATTTCAGAAAACAGAG 58.405 37.500 0.00 0.00 0.00 3.35
1315 1514 5.596836 ACCAGCAAATTTCAGAAAACAGA 57.403 34.783 0.00 0.00 0.00 3.41
1316 1515 5.502869 GCAACCAGCAAATTTCAGAAAACAG 60.503 40.000 0.00 0.00 44.79 3.16
1332 1531 0.746659 AAAGACCACAAGCAACCAGC 59.253 50.000 0.00 0.00 46.19 4.85
1333 1532 1.067516 CCAAAGACCACAAGCAACCAG 59.932 52.381 0.00 0.00 0.00 4.00
1334 1533 1.110442 CCAAAGACCACAAGCAACCA 58.890 50.000 0.00 0.00 0.00 3.67
1335 1534 0.389025 CCCAAAGACCACAAGCAACC 59.611 55.000 0.00 0.00 0.00 3.77
1336 1535 0.389025 CCCCAAAGACCACAAGCAAC 59.611 55.000 0.00 0.00 0.00 4.17
1337 1536 0.260230 TCCCCAAAGACCACAAGCAA 59.740 50.000 0.00 0.00 0.00 3.91
1338 1537 0.482446 ATCCCCAAAGACCACAAGCA 59.518 50.000 0.00 0.00 0.00 3.91
1339 1538 1.177401 GATCCCCAAAGACCACAAGC 58.823 55.000 0.00 0.00 0.00 4.01
1340 1539 2.887151 AGATCCCCAAAGACCACAAG 57.113 50.000 0.00 0.00 0.00 3.16
1341 1540 2.576191 CCTAGATCCCCAAAGACCACAA 59.424 50.000 0.00 0.00 0.00 3.33
1347 1546 1.691482 CCCGACCTAGATCCCCAAAGA 60.691 57.143 0.00 0.00 0.00 2.52
1348 1547 0.759346 CCCGACCTAGATCCCCAAAG 59.241 60.000 0.00 0.00 0.00 2.77
1446 1645 6.404074 GGAACAAAAAGCTGAGGACAGATATG 60.404 42.308 0.00 0.00 46.03 1.78
1475 1679 7.083062 TCATCCCAATAGAGCTATGACATTT 57.917 36.000 0.00 0.00 0.00 2.32
1481 1685 7.991084 TCAAATTCATCCCAATAGAGCTATG 57.009 36.000 0.00 0.00 0.00 2.23
1490 1694 6.405065 CGAAGTCACATCAAATTCATCCCAAT 60.405 38.462 0.00 0.00 0.00 3.16
1493 1697 4.731773 GCGAAGTCACATCAAATTCATCCC 60.732 45.833 0.00 0.00 0.00 3.85
1516 1720 2.549633 GACAACAATGGCCGATTGAG 57.450 50.000 25.31 20.02 43.87 3.02
1602 1806 2.048222 CCGCTTCACCTCGCTCAA 60.048 61.111 0.00 0.00 0.00 3.02
1631 1835 1.880796 CGATGACACGGCGCCAATA 60.881 57.895 28.98 7.84 0.00 1.90
1776 1980 7.066404 AAGAGGAACAGAAAAACTGAACTCTTC 59.934 37.037 18.57 11.79 46.67 2.87
1833 2037 3.057876 ACAAAAGTGACAACGTGAGCAAA 60.058 39.130 0.00 0.00 0.00 3.68
2100 2328 2.094026 GTCCTAAAGGCCAAAAGGCATG 60.094 50.000 5.01 0.00 45.61 4.06
2181 2409 7.880160 TCACTACATGAAATTAATCCCCTTG 57.120 36.000 0.00 0.00 33.02 3.61
2285 2519 3.222603 ACCAGCCAACTACTTTTTGAGG 58.777 45.455 0.00 0.00 0.00 3.86
2289 2523 3.887110 GGTGTACCAGCCAACTACTTTTT 59.113 43.478 0.00 0.00 35.64 1.94
2535 2769 5.358160 CCCTCCCTTTTTATTTACTCTGCAG 59.642 44.000 7.63 7.63 0.00 4.41
2553 2787 5.628130 ACAAACTAAGTTTTACTCCCTCCC 58.372 41.667 0.00 0.00 33.10 4.30
2739 2992 2.746472 GCAGAGAGGAACAAACTGTGGT 60.746 50.000 0.00 0.00 0.00 4.16
2989 3251 1.131126 GCGTGGAAAGTGGTCATGATG 59.869 52.381 0.00 0.00 0.00 3.07
2991 3253 0.605319 GGCGTGGAAAGTGGTCATGA 60.605 55.000 0.00 0.00 0.00 3.07
3054 3316 7.810658 ACATTACTGTGCATAAGAAAACTCAG 58.189 34.615 6.39 0.00 33.22 3.35
3074 3336 6.270463 TGGTGTTTACTGGTAGGAGAACATTA 59.730 38.462 0.00 0.00 30.79 1.90
3091 3353 6.272318 CAGAAAATTCAACTGCTGGTGTTTA 58.728 36.000 8.61 0.00 0.00 2.01
3102 3364 9.956720 GCATATTATAGTGCAGAAAATTCAACT 57.043 29.630 0.00 0.00 40.94 3.16
3276 3539 7.826252 AGCAACTAGAATTCTCTTGAGCAATAA 59.174 33.333 21.78 0.00 34.38 1.40
3277 3540 7.334090 AGCAACTAGAATTCTCTTGAGCAATA 58.666 34.615 21.78 0.00 34.38 1.90
3284 3547 6.586463 TCGTACAAGCAACTAGAATTCTCTTG 59.414 38.462 22.71 22.71 36.48 3.02
3344 3607 3.186613 GTCGGATTCAAGGTCTGTTTGTC 59.813 47.826 0.00 0.00 0.00 3.18
3364 3627 4.335594 GGGTAAGCATCATAAGTTGGTGTC 59.664 45.833 0.00 0.00 38.80 3.67
3375 3638 9.816354 GTAAATTTGTATTTGGGTAAGCATCAT 57.184 29.630 0.00 0.00 35.61 2.45
3398 3661 6.126409 ACTTCCCTGTCTTTGAAATGTGTAA 58.874 36.000 0.00 0.00 0.00 2.41
3401 3664 4.823989 AGACTTCCCTGTCTTTGAAATGTG 59.176 41.667 0.00 0.00 44.01 3.21
3402 3665 5.053978 AGACTTCCCTGTCTTTGAAATGT 57.946 39.130 0.00 0.00 44.01 2.71
3422 3685 5.046304 TCCAACAACCAATGGAAAACAAAGA 60.046 36.000 6.16 0.00 42.61 2.52
3485 3748 7.915508 TCAATAACATGGAAATAAGTAGCACG 58.084 34.615 0.00 0.00 0.00 5.34
4038 4328 5.824904 ATCATATGTGAACACTCTTTGCC 57.175 39.130 1.90 0.00 38.01 4.52
4064 4354 8.526147 CATTAGAAAGAAATTTCATGTCCCAGT 58.474 33.333 19.99 1.92 33.53 4.00
4149 4439 0.261991 AGAGCTTCATCGTAGGGGGA 59.738 55.000 0.00 0.00 0.00 4.81
4272 4562 1.738099 GTGGGCAGAGCAGTACACG 60.738 63.158 0.00 0.00 0.00 4.49
4326 4616 5.922053 TGAGCAATATATGAGTTCTGCAGT 58.078 37.500 14.67 0.00 32.21 4.40
4335 4625 7.968956 GCAGAATCCAAATGAGCAATATATGAG 59.031 37.037 0.00 0.00 0.00 2.90
4539 4843 5.751243 ATATTGGTTTTATCTCCACGCAC 57.249 39.130 0.00 0.00 33.12 5.34
4542 4846 8.836413 ACATACAATATTGGTTTTATCTCCACG 58.164 33.333 19.37 0.00 33.12 4.94
4559 4863 4.655649 AGTCATCAGCAGGGACATACAATA 59.344 41.667 0.00 0.00 34.04 1.90
4572 4876 5.901552 TCATTATCGTTGTAGTCATCAGCA 58.098 37.500 0.00 0.00 0.00 4.41
4573 4877 6.642540 TCATCATTATCGTTGTAGTCATCAGC 59.357 38.462 0.00 0.00 0.00 4.26
4596 4900 6.154192 GCTCTCTGGTAATATCTCCATCATCA 59.846 42.308 0.29 0.00 33.01 3.07
4648 4952 0.318441 TCACTCAGGACTTTGCTCGG 59.682 55.000 0.00 0.00 0.00 4.63
4661 4965 2.026945 TTGTGCGCTCCACTCACTCA 62.027 55.000 9.73 0.00 44.92 3.41
4722 5026 0.731417 CAGAGCAAATCTTCCCAGCG 59.269 55.000 0.00 0.00 35.47 5.18
4798 5102 1.059584 TGCTCCTTTGAGGGGTGTGA 61.060 55.000 0.00 0.00 38.44 3.58
4799 5103 0.038744 ATGCTCCTTTGAGGGGTGTG 59.961 55.000 0.00 0.00 38.44 3.82
4836 5140 1.310933 CCAGCTGGAAAGCGCAGAAT 61.311 55.000 29.88 0.00 40.27 2.40
4839 5143 4.112341 GCCAGCTGGAAAGCGCAG 62.112 66.667 37.21 6.70 40.27 5.18
4842 5146 1.080974 CTTTGCCAGCTGGAAAGCG 60.081 57.895 37.21 21.86 40.27 4.68
4854 5158 1.973812 GTCTGCCAGGGTCTTTGCC 60.974 63.158 0.00 0.00 0.00 4.52
4867 5171 1.004440 AGGAGAAGCCGTTGTCTGC 60.004 57.895 0.00 0.00 43.43 4.26
4882 5186 3.359523 CGTCACGTCGTCCCAGGA 61.360 66.667 0.00 0.00 0.00 3.86
4909 5213 0.676782 CGAAAAGGAATCACGGGCCT 60.677 55.000 0.84 0.00 0.00 5.19
4914 5218 0.179189 GGCTGCGAAAAGGAATCACG 60.179 55.000 0.00 0.00 0.00 4.35
4918 5222 2.877691 GCGGCTGCGAAAAGGAAT 59.122 55.556 0.00 0.00 0.00 3.01
4974 5278 6.871603 GAACCTCAGCATCTGCGGGTATAG 62.872 54.167 14.33 1.46 36.31 1.31
5150 5472 3.984241 GCTAGTAGCTCGCACGTG 58.016 61.111 15.16 12.28 38.45 4.49
5192 5514 1.288127 CAAGTGCAGGCCAAGCTTC 59.712 57.895 19.26 12.77 0.00 3.86
5193 5515 1.456331 ACAAGTGCAGGCCAAGCTT 60.456 52.632 19.26 8.57 0.00 3.74
5194 5516 1.900498 GACAAGTGCAGGCCAAGCT 60.900 57.895 19.26 2.81 0.00 3.74
5195 5517 2.138656 CTGACAAGTGCAGGCCAAGC 62.139 60.000 5.01 9.78 0.00 4.01
5241 5564 2.045926 ATCGACCAAGGTGCAGGC 60.046 61.111 0.00 0.00 0.00 4.85
5243 5566 1.354337 CGTGATCGACCAAGGTGCAG 61.354 60.000 0.00 0.00 39.71 4.41
5247 5581 1.215647 GAGCGTGATCGACCAAGGT 59.784 57.895 0.00 0.00 39.71 3.50
5250 5584 2.506217 GCGAGCGTGATCGACCAA 60.506 61.111 12.14 0.00 45.56 3.67
5261 5595 3.913573 CGTTCATTCCGGCGAGCG 61.914 66.667 9.30 3.17 0.00 5.03
5268 5602 1.393539 ACGAAAGATGCGTTCATTCCG 59.606 47.619 0.00 0.00 39.18 4.30
5285 5619 1.447838 GCCTCCGATCTTGCAACGA 60.448 57.895 9.29 5.43 0.00 3.85
5291 5625 0.392193 ACTGCTTGCCTCCGATCTTG 60.392 55.000 0.00 0.00 0.00 3.02
5297 5631 1.153549 GTCCTACTGCTTGCCTCCG 60.154 63.158 0.00 0.00 0.00 4.63
5332 5680 3.414700 GCCGTCCAGCTTGACACG 61.415 66.667 17.31 7.97 34.88 4.49
5334 5682 4.680237 CCGCCGTCCAGCTTGACA 62.680 66.667 17.31 0.00 34.88 3.58
5347 5695 2.187946 CCTGGTCTGTCATCCGCC 59.812 66.667 0.00 0.00 0.00 6.13
5350 5698 2.512515 GCGCCTGGTCTGTCATCC 60.513 66.667 0.00 0.00 0.00 3.51
5354 5702 2.743928 CAAGGCGCCTGGTCTGTC 60.744 66.667 33.60 0.00 0.00 3.51
5357 5705 2.281761 CAACAAGGCGCCTGGTCT 60.282 61.111 36.22 22.55 28.36 3.85
5365 5713 3.059188 CAGGTACTAACAACAACAAGGCG 60.059 47.826 0.00 0.00 36.02 5.52
5378 5726 5.943416 CCAAAATCACCATCACAGGTACTAA 59.057 40.000 0.00 0.00 40.77 2.24
5379 5727 5.013704 ACCAAAATCACCATCACAGGTACTA 59.986 40.000 0.00 0.00 40.77 1.82
5380 5728 4.202567 ACCAAAATCACCATCACAGGTACT 60.203 41.667 0.00 0.00 40.77 2.73
5382 5730 4.380843 ACCAAAATCACCATCACAGGTA 57.619 40.909 0.00 0.00 40.77 3.08
5384 5732 4.605640 AAACCAAAATCACCATCACAGG 57.394 40.909 0.00 0.00 0.00 4.00
5442 5799 4.286032 AGCCAGATCCAGTGTACTTTGTAA 59.714 41.667 0.00 0.00 0.00 2.41
5454 5825 3.790437 ACGGCCAGCCAGATCCAG 61.790 66.667 9.78 0.00 35.37 3.86
5511 5884 1.173913 GAACACCCATGCCACTAACC 58.826 55.000 0.00 0.00 0.00 2.85
5550 5923 1.688422 TAATAAGCCGTGCGTGCGTG 61.688 55.000 0.00 0.00 0.00 5.34
5551 5924 0.808453 ATAATAAGCCGTGCGTGCGT 60.808 50.000 0.00 0.00 0.00 5.24
5552 5925 1.133407 TATAATAAGCCGTGCGTGCG 58.867 50.000 0.00 0.00 0.00 5.34
5594 5967 5.695816 GCACTCCAGATTTTGCAACAAATTA 59.304 36.000 0.00 0.00 34.97 1.40
5597 5972 3.456280 GCACTCCAGATTTTGCAACAAA 58.544 40.909 0.00 0.00 34.97 2.83
5629 6004 6.455360 TGATGATATCAAAAGGTTTGCCTC 57.545 37.500 9.99 0.00 39.38 4.70
5685 6098 6.200475 GCGGAGGATACACTACTTGTTAATTC 59.800 42.308 0.00 0.00 39.91 2.17
5688 6101 4.142093 GGCGGAGGATACACTACTTGTTAA 60.142 45.833 0.00 0.00 39.91 2.01
5698 6111 1.134220 TCATTTGGGCGGAGGATACAC 60.134 52.381 0.00 0.00 41.41 2.90
5708 6121 9.307121 TGTATATTTTTACAAATCATTTGGGCG 57.693 29.630 14.70 0.00 44.81 6.13
5721 6134 9.790389 CGTTGGGCTTAATTGTATATTTTTACA 57.210 29.630 0.00 0.00 0.00 2.41
5722 6135 9.240159 CCGTTGGGCTTAATTGTATATTTTTAC 57.760 33.333 0.00 0.00 0.00 2.01
5723 6136 9.186837 TCCGTTGGGCTTAATTGTATATTTTTA 57.813 29.630 0.00 0.00 0.00 1.52
5724 6137 8.068892 TCCGTTGGGCTTAATTGTATATTTTT 57.931 30.769 0.00 0.00 0.00 1.94
5727 6140 7.201875 CCTTTCCGTTGGGCTTAATTGTATATT 60.202 37.037 0.00 0.00 0.00 1.28
5728 6141 6.264518 CCTTTCCGTTGGGCTTAATTGTATAT 59.735 38.462 0.00 0.00 0.00 0.86
5729 6142 5.591067 CCTTTCCGTTGGGCTTAATTGTATA 59.409 40.000 0.00 0.00 0.00 1.47
5730 6143 4.401202 CCTTTCCGTTGGGCTTAATTGTAT 59.599 41.667 0.00 0.00 0.00 2.29
5731 6144 3.759618 CCTTTCCGTTGGGCTTAATTGTA 59.240 43.478 0.00 0.00 0.00 2.41
5732 6145 2.560981 CCTTTCCGTTGGGCTTAATTGT 59.439 45.455 0.00 0.00 0.00 2.71
5734 6147 3.163616 TCCTTTCCGTTGGGCTTAATT 57.836 42.857 0.00 0.00 0.00 1.40
5736 6149 2.660670 TTCCTTTCCGTTGGGCTTAA 57.339 45.000 0.00 0.00 0.00 1.85
5737 6150 2.660670 TTTCCTTTCCGTTGGGCTTA 57.339 45.000 0.00 0.00 0.00 3.09
5738 6151 1.893137 GATTTCCTTTCCGTTGGGCTT 59.107 47.619 0.00 0.00 0.00 4.35
5739 6152 1.075536 AGATTTCCTTTCCGTTGGGCT 59.924 47.619 0.00 0.00 0.00 5.19
5740 6153 1.545841 AGATTTCCTTTCCGTTGGGC 58.454 50.000 0.00 0.00 0.00 5.36
5741 6154 4.035208 CGATAAGATTTCCTTTCCGTTGGG 59.965 45.833 0.00 0.00 36.34 4.12
5790 6209 1.453155 CGGCTAGGATTGTTGTTGCT 58.547 50.000 0.00 0.00 0.00 3.91
5791 6210 0.179163 GCGGCTAGGATTGTTGTTGC 60.179 55.000 0.00 0.00 0.00 4.17
5799 6218 2.489938 TGTTTCTTGCGGCTAGGATT 57.510 45.000 11.38 0.00 0.00 3.01
5813 6232 3.436704 TCAGCTGGTCGATGATTTGTTTC 59.563 43.478 15.13 0.00 32.10 2.78
5826 6245 1.307097 GCATTCTCCATCAGCTGGTC 58.693 55.000 15.13 0.00 46.08 4.02
5833 6252 0.525455 CGTCGTCGCATTCTCCATCA 60.525 55.000 0.00 0.00 0.00 3.07
5837 6256 0.731514 TGTTCGTCGTCGCATTCTCC 60.732 55.000 0.00 0.00 36.96 3.71
5838 6257 0.362512 GTGTTCGTCGTCGCATTCTC 59.637 55.000 0.00 0.00 36.96 2.87
5842 6261 0.872451 TTGTGTGTTCGTCGTCGCAT 60.872 50.000 0.00 0.00 36.96 4.73
5843 6262 1.476235 CTTGTGTGTTCGTCGTCGCA 61.476 55.000 0.00 0.00 36.96 5.10
5844 6263 1.198397 CTTGTGTGTTCGTCGTCGC 59.802 57.895 0.00 0.00 36.96 5.19
5845 6264 1.193644 TTCTTGTGTGTTCGTCGTCG 58.806 50.000 0.00 0.00 38.55 5.12
5846 6265 2.601763 ACTTTCTTGTGTGTTCGTCGTC 59.398 45.455 0.00 0.00 0.00 4.20
5847 6266 2.613691 ACTTTCTTGTGTGTTCGTCGT 58.386 42.857 0.00 0.00 0.00 4.34
5848 6267 4.966850 ATACTTTCTTGTGTGTTCGTCG 57.033 40.909 0.00 0.00 0.00 5.12
5849 6268 7.633361 TCTTATACTTTCTTGTGTGTTCGTC 57.367 36.000 0.00 0.00 0.00 4.20
5850 6269 7.170998 CCTTCTTATACTTTCTTGTGTGTTCGT 59.829 37.037 0.00 0.00 0.00 3.85
5851 6270 7.384115 TCCTTCTTATACTTTCTTGTGTGTTCG 59.616 37.037 0.00 0.00 0.00 3.95
5852 6271 8.603242 TCCTTCTTATACTTTCTTGTGTGTTC 57.397 34.615 0.00 0.00 0.00 3.18
5904 6323 9.106070 GGGAAAATCGATTACTACTAACACAAT 57.894 33.333 11.83 0.00 0.00 2.71
5905 6324 8.316214 AGGGAAAATCGATTACTACTAACACAA 58.684 33.333 11.83 0.00 0.00 3.33
5906 6325 7.844009 AGGGAAAATCGATTACTACTAACACA 58.156 34.615 11.83 0.00 0.00 3.72
5907 6326 7.977853 TGAGGGAAAATCGATTACTACTAACAC 59.022 37.037 11.83 0.00 0.00 3.32
5908 6327 7.977853 GTGAGGGAAAATCGATTACTACTAACA 59.022 37.037 11.83 3.34 0.00 2.41
5909 6328 7.977853 TGTGAGGGAAAATCGATTACTACTAAC 59.022 37.037 11.83 11.22 0.00 2.34
5910 6329 8.070034 TGTGAGGGAAAATCGATTACTACTAA 57.930 34.615 11.83 0.00 0.00 2.24
5911 6330 7.649533 TGTGAGGGAAAATCGATTACTACTA 57.350 36.000 11.83 0.00 0.00 1.82
5912 6331 6.540438 TGTGAGGGAAAATCGATTACTACT 57.460 37.500 11.83 7.96 0.00 2.57
5913 6332 7.039882 TCTTGTGAGGGAAAATCGATTACTAC 58.960 38.462 11.83 2.39 0.00 2.73
5914 6333 7.177832 TCTTGTGAGGGAAAATCGATTACTA 57.822 36.000 11.83 0.34 0.00 1.82
5915 6334 6.049955 TCTTGTGAGGGAAAATCGATTACT 57.950 37.500 11.83 7.61 0.00 2.24
5916 6335 6.594159 TCTTCTTGTGAGGGAAAATCGATTAC 59.406 38.462 11.83 8.73 0.00 1.89
5917 6336 6.707290 TCTTCTTGTGAGGGAAAATCGATTA 58.293 36.000 11.83 0.00 0.00 1.75
5918 6337 5.560724 TCTTCTTGTGAGGGAAAATCGATT 58.439 37.500 4.39 4.39 0.00 3.34
5919 6338 5.165961 TCTTCTTGTGAGGGAAAATCGAT 57.834 39.130 0.00 0.00 0.00 3.59
5920 6339 4.617253 TCTTCTTGTGAGGGAAAATCGA 57.383 40.909 0.00 0.00 0.00 3.59
5921 6340 5.689383 TTTCTTCTTGTGAGGGAAAATCG 57.311 39.130 0.00 0.00 0.00 3.34
5922 6341 7.277174 TCTTTTCTTCTTGTGAGGGAAAATC 57.723 36.000 0.00 0.00 36.37 2.17
5923 6342 7.660030 TTCTTTTCTTCTTGTGAGGGAAAAT 57.340 32.000 0.00 0.00 36.37 1.82
5924 6343 7.475137 TTTCTTTTCTTCTTGTGAGGGAAAA 57.525 32.000 0.00 0.00 36.00 2.29
5925 6344 7.660030 ATTTCTTTTCTTCTTGTGAGGGAAA 57.340 32.000 0.00 0.00 0.00 3.13
5926 6345 7.448469 CCTATTTCTTTTCTTCTTGTGAGGGAA 59.552 37.037 0.00 0.00 0.00 3.97
5927 6346 6.942576 CCTATTTCTTTTCTTCTTGTGAGGGA 59.057 38.462 0.00 0.00 0.00 4.20
5928 6347 6.942576 TCCTATTTCTTTTCTTCTTGTGAGGG 59.057 38.462 0.00 0.00 0.00 4.30
5929 6348 7.663493 ACTCCTATTTCTTTTCTTCTTGTGAGG 59.337 37.037 0.00 0.00 0.00 3.86
5930 6349 8.614469 ACTCCTATTTCTTTTCTTCTTGTGAG 57.386 34.615 0.00 0.00 0.00 3.51
5958 6377 9.344772 CAAGTCTAGTCTAGTATACATTCCTGT 57.655 37.037 5.50 0.00 39.49 4.00
5959 6378 9.562408 TCAAGTCTAGTCTAGTATACATTCCTG 57.438 37.037 5.50 0.00 0.00 3.86
5960 6379 9.563748 GTCAAGTCTAGTCTAGTATACATTCCT 57.436 37.037 5.50 0.00 0.00 3.36
5961 6380 8.785946 GGTCAAGTCTAGTCTAGTATACATTCC 58.214 40.741 5.50 0.00 0.00 3.01
5962 6381 9.339850 TGGTCAAGTCTAGTCTAGTATACATTC 57.660 37.037 5.50 0.00 0.00 2.67
5963 6382 9.696572 TTGGTCAAGTCTAGTCTAGTATACATT 57.303 33.333 5.50 0.00 0.00 2.71
5964 6383 9.869667 ATTGGTCAAGTCTAGTCTAGTATACAT 57.130 33.333 5.50 0.00 0.00 2.29
5965 6384 9.696572 AATTGGTCAAGTCTAGTCTAGTATACA 57.303 33.333 5.50 0.00 0.00 2.29
5967 6386 9.352191 GGAATTGGTCAAGTCTAGTCTAGTATA 57.648 37.037 6.77 0.00 35.88 1.47
5968 6387 7.839705 TGGAATTGGTCAAGTCTAGTCTAGTAT 59.160 37.037 6.77 0.00 35.88 2.12
5969 6388 7.179966 TGGAATTGGTCAAGTCTAGTCTAGTA 58.820 38.462 6.77 0.00 35.88 1.82
5970 6389 6.017192 TGGAATTGGTCAAGTCTAGTCTAGT 58.983 40.000 6.77 0.00 35.88 2.57
5971 6390 6.531503 TGGAATTGGTCAAGTCTAGTCTAG 57.468 41.667 10.32 0.00 35.88 2.43
5972 6391 7.496346 AATGGAATTGGTCAAGTCTAGTCTA 57.504 36.000 10.32 0.00 33.44 2.59
5973 6392 6.380079 AATGGAATTGGTCAAGTCTAGTCT 57.620 37.500 10.32 0.00 33.44 3.24
5988 6407 3.242011 ACAACTTCCCAGCAATGGAATT 58.758 40.909 2.56 0.00 40.94 2.17
5989 6408 2.827921 GACAACTTCCCAGCAATGGAAT 59.172 45.455 2.56 0.00 40.94 3.01
5990 6409 2.238521 GACAACTTCCCAGCAATGGAA 58.761 47.619 0.00 0.00 39.54 3.53
5991 6410 1.881925 CGACAACTTCCCAGCAATGGA 60.882 52.381 0.00 0.00 0.00 3.41
5992 6411 0.523072 CGACAACTTCCCAGCAATGG 59.477 55.000 0.00 0.00 0.00 3.16
5993 6412 1.197721 GTCGACAACTTCCCAGCAATG 59.802 52.381 11.55 0.00 0.00 2.82
5994 6413 1.202758 TGTCGACAACTTCCCAGCAAT 60.203 47.619 17.62 0.00 0.00 3.56
5995 6414 0.179234 TGTCGACAACTTCCCAGCAA 59.821 50.000 17.62 0.00 0.00 3.91
5996 6415 0.531974 GTGTCGACAACTTCCCAGCA 60.532 55.000 21.95 0.00 0.00 4.41
5997 6416 1.557443 CGTGTCGACAACTTCCCAGC 61.557 60.000 21.95 3.22 0.00 4.85
5998 6417 1.557443 GCGTGTCGACAACTTCCCAG 61.557 60.000 21.95 5.61 0.00 4.45
5999 6418 1.593209 GCGTGTCGACAACTTCCCA 60.593 57.895 21.95 0.00 0.00 4.37
6000 6419 2.315386 GGCGTGTCGACAACTTCCC 61.315 63.158 21.95 12.09 33.63 3.97
6001 6420 0.878961 AAGGCGTGTCGACAACTTCC 60.879 55.000 21.95 17.55 37.34 3.46
6002 6421 0.935196 AAAGGCGTGTCGACAACTTC 59.065 50.000 21.95 6.84 37.34 3.01
6003 6422 2.228138 TAAAGGCGTGTCGACAACTT 57.772 45.000 21.95 20.50 37.34 2.66
6004 6423 2.450609 ATAAAGGCGTGTCGACAACT 57.549 45.000 21.95 15.77 37.34 3.16
6005 6424 4.852609 ATAATAAAGGCGTGTCGACAAC 57.147 40.909 21.95 15.40 37.34 3.32
6006 6425 8.821147 ATAATATAATAAAGGCGTGTCGACAA 57.179 30.769 21.95 2.53 37.34 3.18
6051 6470 0.313043 ACAACATCAAGCACAGCTGC 59.687 50.000 15.27 0.57 44.63 5.25
6052 6471 3.902261 TTACAACATCAAGCACAGCTG 57.098 42.857 13.48 13.48 39.62 4.24
6053 6472 6.405065 CCATTATTACAACATCAAGCACAGCT 60.405 38.462 0.00 0.00 42.56 4.24
6054 6473 5.745294 CCATTATTACAACATCAAGCACAGC 59.255 40.000 0.00 0.00 0.00 4.40
6055 6474 6.855836 ACCATTATTACAACATCAAGCACAG 58.144 36.000 0.00 0.00 0.00 3.66
6056 6475 6.832520 ACCATTATTACAACATCAAGCACA 57.167 33.333 0.00 0.00 0.00 4.57
6057 6476 9.801873 AATTACCATTATTACAACATCAAGCAC 57.198 29.630 0.00 0.00 0.00 4.40
6107 6526 9.341899 GCCTTTTTCTTTTTCTTTTTCCTTTTC 57.658 29.630 0.00 0.00 0.00 2.29
6108 6527 8.020819 CGCCTTTTTCTTTTTCTTTTTCCTTTT 58.979 29.630 0.00 0.00 0.00 2.27
6109 6528 7.174253 ACGCCTTTTTCTTTTTCTTTTTCCTTT 59.826 29.630 0.00 0.00 0.00 3.11
6110 6529 6.653320 ACGCCTTTTTCTTTTTCTTTTTCCTT 59.347 30.769 0.00 0.00 0.00 3.36
6111 6530 6.170506 ACGCCTTTTTCTTTTTCTTTTTCCT 58.829 32.000 0.00 0.00 0.00 3.36
6112 6531 6.417191 ACGCCTTTTTCTTTTTCTTTTTCC 57.583 33.333 0.00 0.00 0.00 3.13
6113 6532 6.456449 GGGACGCCTTTTTCTTTTTCTTTTTC 60.456 38.462 0.00 0.00 0.00 2.29
6114 6533 5.353123 GGGACGCCTTTTTCTTTTTCTTTTT 59.647 36.000 0.00 0.00 0.00 1.94
6115 6534 4.873827 GGGACGCCTTTTTCTTTTTCTTTT 59.126 37.500 0.00 0.00 0.00 2.27
6116 6535 4.081365 TGGGACGCCTTTTTCTTTTTCTTT 60.081 37.500 0.00 0.00 0.00 2.52
6117 6536 3.449377 TGGGACGCCTTTTTCTTTTTCTT 59.551 39.130 0.00 0.00 0.00 2.52
6118 6537 3.028130 TGGGACGCCTTTTTCTTTTTCT 58.972 40.909 0.00 0.00 0.00 2.52
6119 6538 3.446310 TGGGACGCCTTTTTCTTTTTC 57.554 42.857 0.00 0.00 0.00 2.29
6120 6539 3.244078 GGATGGGACGCCTTTTTCTTTTT 60.244 43.478 0.00 0.00 0.00 1.94
6121 6540 2.299013 GGATGGGACGCCTTTTTCTTTT 59.701 45.455 0.00 0.00 0.00 2.27
6122 6541 1.893137 GGATGGGACGCCTTTTTCTTT 59.107 47.619 0.00 0.00 0.00 2.52
6123 6542 1.203001 TGGATGGGACGCCTTTTTCTT 60.203 47.619 0.00 0.00 0.00 2.52
6124 6543 0.404040 TGGATGGGACGCCTTTTTCT 59.596 50.000 0.00 0.00 0.00 2.52
6125 6544 0.811281 CTGGATGGGACGCCTTTTTC 59.189 55.000 0.00 0.00 0.00 2.29
6126 6545 1.250840 GCTGGATGGGACGCCTTTTT 61.251 55.000 0.00 0.00 0.00 1.94
6127 6546 1.678970 GCTGGATGGGACGCCTTTT 60.679 57.895 0.00 0.00 0.00 2.27
6128 6547 2.044946 GCTGGATGGGACGCCTTT 60.045 61.111 0.00 0.00 0.00 3.11
6129 6548 3.329889 TGCTGGATGGGACGCCTT 61.330 61.111 0.00 0.00 0.00 4.35
6130 6549 3.790437 CTGCTGGATGGGACGCCT 61.790 66.667 0.00 0.00 0.00 5.52
6132 6551 4.479993 AGCTGCTGGATGGGACGC 62.480 66.667 0.00 0.00 0.00 5.19
6133 6552 2.513204 CAGCTGCTGGATGGGACG 60.513 66.667 21.71 0.00 0.00 4.79
6134 6553 1.748122 CACAGCTGCTGGATGGGAC 60.748 63.158 31.00 0.00 36.78 4.46
6135 6554 2.226315 ACACAGCTGCTGGATGGGA 61.226 57.895 31.00 0.00 36.78 4.37
6136 6555 2.044555 CACACAGCTGCTGGATGGG 61.045 63.158 31.00 19.56 41.10 4.00
6137 6556 2.697761 GCACACAGCTGCTGGATGG 61.698 63.158 31.00 19.60 41.15 3.51
6138 6557 2.697761 GGCACACAGCTGCTGGATG 61.698 63.158 31.00 26.73 44.79 3.51
6139 6558 2.360852 GGCACACAGCTGCTGGAT 60.361 61.111 31.00 17.14 44.79 3.41
6140 6559 4.994471 CGGCACACAGCTGCTGGA 62.994 66.667 31.00 0.00 43.88 3.86
6146 6565 2.947938 AAGAAGCACGGCACACAGCT 62.948 55.000 0.00 0.00 44.79 4.24
6147 6566 2.449556 GAAGAAGCACGGCACACAGC 62.450 60.000 0.00 0.00 44.65 4.40
6148 6567 0.882042 AGAAGAAGCACGGCACACAG 60.882 55.000 0.00 0.00 0.00 3.66
6149 6568 0.880278 GAGAAGAAGCACGGCACACA 60.880 55.000 0.00 0.00 0.00 3.72
6150 6569 0.601311 AGAGAAGAAGCACGGCACAC 60.601 55.000 0.00 0.00 0.00 3.82
6151 6570 0.319900 GAGAGAAGAAGCACGGCACA 60.320 55.000 0.00 0.00 0.00 4.57
6152 6571 1.016653 GGAGAGAAGAAGCACGGCAC 61.017 60.000 0.00 0.00 0.00 5.01
6153 6572 1.293498 GGAGAGAAGAAGCACGGCA 59.707 57.895 0.00 0.00 0.00 5.69
6154 6573 1.448717 GGGAGAGAAGAAGCACGGC 60.449 63.158 0.00 0.00 0.00 5.68
6155 6574 1.219393 GGGGAGAGAAGAAGCACGG 59.781 63.158 0.00 0.00 0.00 4.94
6156 6575 0.174617 GAGGGGAGAGAAGAAGCACG 59.825 60.000 0.00 0.00 0.00 5.34
6157 6576 0.174617 CGAGGGGAGAGAAGAAGCAC 59.825 60.000 0.00 0.00 0.00 4.40
6158 6577 1.608717 GCGAGGGGAGAGAAGAAGCA 61.609 60.000 0.00 0.00 0.00 3.91
6159 6578 1.142965 GCGAGGGGAGAGAAGAAGC 59.857 63.158 0.00 0.00 0.00 3.86
6160 6579 0.744281 GAGCGAGGGGAGAGAAGAAG 59.256 60.000 0.00 0.00 0.00 2.85
6161 6580 0.684805 GGAGCGAGGGGAGAGAAGAA 60.685 60.000 0.00 0.00 0.00 2.52
6162 6581 1.076632 GGAGCGAGGGGAGAGAAGA 60.077 63.158 0.00 0.00 0.00 2.87
6163 6582 3.532501 GGAGCGAGGGGAGAGAAG 58.467 66.667 0.00 0.00 0.00 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.