Multiple sequence alignment - TraesCS6B01G415100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G415100 chr6B 100.000 4570 0 0 1 4570 687953847 687958416 0.000000e+00 8440.0
1 TraesCS6B01G415100 chr6B 86.007 1222 158 6 2363 3576 688033451 688032235 0.000000e+00 1297.0
2 TraesCS6B01G415100 chr6B 83.767 1306 203 7 2364 3667 688064534 688063236 0.000000e+00 1229.0
3 TraesCS6B01G415100 chr6B 84.206 1279 176 14 2392 3667 688125158 688123903 0.000000e+00 1219.0
4 TraesCS6B01G415100 chr6B 84.856 1215 174 7 2364 3573 687732996 687734205 0.000000e+00 1216.0
5 TraesCS6B01G415100 chr6B 86.023 880 123 0 2363 3242 687876277 687877156 0.000000e+00 944.0
6 TraesCS6B01G415100 chr6B 80.905 995 129 34 954 1927 687873604 687874558 0.000000e+00 728.0
7 TraesCS6B01G415100 chr6B 77.403 1217 250 21 2364 3572 687134084 687132885 0.000000e+00 701.0
8 TraesCS6B01G415100 chr6B 79.432 880 142 30 1059 1926 687180467 687179615 1.830000e-163 586.0
9 TraesCS6B01G415100 chr6B 78.438 960 152 36 1267 2206 688126199 688125275 3.970000e-160 575.0
10 TraesCS6B01G415100 chr6B 78.009 673 113 21 1084 1740 688080566 688079913 1.540000e-104 390.0
11 TraesCS6B01G415100 chr6B 91.845 233 15 4 46 278 148068456 148068684 5.700000e-84 322.0
12 TraesCS6B01G415100 chr6B 89.787 235 21 3 48 282 626211921 626211690 9.610000e-77 298.0
13 TraesCS6B01G415100 chr6D 94.205 1674 74 13 2364 4026 452907543 452909204 0.000000e+00 2532.0
14 TraesCS6B01G415100 chr6D 87.341 1967 161 40 295 2206 452905494 452907427 0.000000e+00 2172.0
15 TraesCS6B01G415100 chr6D 84.128 1405 192 14 2280 3667 452931228 452929838 0.000000e+00 1330.0
16 TraesCS6B01G415100 chr6D 84.349 1214 182 6 2364 3573 452841429 452842638 0.000000e+00 1182.0
17 TraesCS6B01G415100 chr6D 79.260 892 143 30 1059 1940 452485823 452484964 6.590000e-163 584.0
18 TraesCS6B01G415100 chr6D 80.584 685 101 25 1531 2206 452931905 452931244 2.450000e-137 499.0
19 TraesCS6B01G415100 chr6D 84.547 453 48 5 1288 1740 452911402 452911832 3.270000e-116 429.0
20 TraesCS6B01G415100 chr6D 76.261 872 165 28 1085 1940 452839719 452840564 4.230000e-115 425.0
21 TraesCS6B01G415100 chr6D 91.093 247 22 0 1978 2224 452911965 452912211 7.330000e-88 335.0
22 TraesCS6B01G415100 chr6D 84.638 345 34 9 955 1297 452909856 452910183 4.410000e-85 326.0
23 TraesCS6B01G415100 chr6D 92.308 130 5 5 3995 4122 452909122 452909248 3.630000e-41 180.0
24 TraesCS6B01G415100 chr6D 77.778 297 45 15 1281 1568 452474431 452474147 3.660000e-36 163.0
25 TraesCS6B01G415100 chr6D 98.039 51 1 0 1910 1960 452911842 452911892 6.300000e-14 89.8
26 TraesCS6B01G415100 chr6D 94.118 51 1 2 4341 4390 456557499 456557548 4.900000e-10 76.8
27 TraesCS6B01G415100 chr6A 91.251 1886 119 25 1978 3836 598860238 598862104 0.000000e+00 2527.0
28 TraesCS6B01G415100 chr6A 79.877 979 126 44 957 1912 598926820 598925890 0.000000e+00 651.0
29 TraesCS6B01G415100 chr6A 78.643 1002 146 36 956 1929 598859200 598860161 1.820000e-168 603.0
30 TraesCS6B01G415100 chr6A 79.636 879 135 34 1073 1940 598157654 598156809 3.940000e-165 592.0
31 TraesCS6B01G415100 chr6A 87.417 302 19 6 4056 4354 598862102 598862387 3.410000e-86 329.0
32 TraesCS6B01G415100 chr6A 89.216 204 19 2 1072 1273 598884053 598884255 7.590000e-63 252.0
33 TraesCS6B01G415100 chr6A 85.207 169 17 5 4402 4570 598862406 598862566 2.830000e-37 167.0
34 TraesCS6B01G415100 chr4D 93.722 223 11 3 53 275 341032778 341032559 9.480000e-87 331.0
35 TraesCS6B01G415100 chr4D 91.071 224 14 5 55 277 121171618 121171400 9.610000e-77 298.0
36 TraesCS6B01G415100 chr4D 100.000 42 0 0 4351 4392 282538299 282538258 1.360000e-10 78.7
37 TraesCS6B01G415100 chr1B 94.064 219 9 4 53 271 304122731 304122945 3.410000e-86 329.0
38 TraesCS6B01G415100 chr1B 100.000 43 0 0 4348 4390 619215347 619215389 3.790000e-11 80.5
39 TraesCS6B01G415100 chr1B 97.778 45 0 1 4346 4390 250351082 250351125 4.900000e-10 76.8
40 TraesCS6B01G415100 chr7D 92.000 225 13 5 53 276 615443399 615443619 1.230000e-80 311.0
41 TraesCS6B01G415100 chr7D 93.333 45 1 2 3743 3786 54747703 54747746 1.060000e-06 65.8
42 TraesCS6B01G415100 chr3D 91.964 224 14 3 51 274 103627973 103628192 1.230000e-80 311.0
43 TraesCS6B01G415100 chr3D 93.878 49 1 2 4343 4390 561322240 561322193 6.340000e-09 73.1
44 TraesCS6B01G415100 chr5A 90.455 220 19 2 54 273 568488843 568489060 5.780000e-74 289.0
45 TraesCS6B01G415100 chr5A 93.878 49 3 0 4342 4390 621541252 621541204 1.760000e-09 75.0
46 TraesCS6B01G415100 chr4B 88.983 236 20 5 47 279 605885539 605885771 2.080000e-73 287.0
47 TraesCS6B01G415100 chr7B 96.154 52 0 2 4340 4390 526679993 526680043 2.930000e-12 84.2
48 TraesCS6B01G415100 chr3A 93.878 49 3 0 4342 4390 699620039 699620087 1.760000e-09 75.0
49 TraesCS6B01G415100 chr2D 95.652 46 2 0 4345 4390 50669472 50669517 1.760000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G415100 chr6B 687953847 687958416 4569 False 8440.000000 8440 100.000000 1 4570 1 chr6B.!!$F3 4569
1 TraesCS6B01G415100 chr6B 688032235 688033451 1216 True 1297.000000 1297 86.007000 2363 3576 1 chr6B.!!$R4 1213
2 TraesCS6B01G415100 chr6B 688063236 688064534 1298 True 1229.000000 1229 83.767000 2364 3667 1 chr6B.!!$R5 1303
3 TraesCS6B01G415100 chr6B 687732996 687734205 1209 False 1216.000000 1216 84.856000 2364 3573 1 chr6B.!!$F2 1209
4 TraesCS6B01G415100 chr6B 688123903 688126199 2296 True 897.000000 1219 81.322000 1267 3667 2 chr6B.!!$R7 2400
5 TraesCS6B01G415100 chr6B 687873604 687877156 3552 False 836.000000 944 83.464000 954 3242 2 chr6B.!!$F4 2288
6 TraesCS6B01G415100 chr6B 687132885 687134084 1199 True 701.000000 701 77.403000 2364 3572 1 chr6B.!!$R2 1208
7 TraesCS6B01G415100 chr6B 687179615 687180467 852 True 586.000000 586 79.432000 1059 1926 1 chr6B.!!$R3 867
8 TraesCS6B01G415100 chr6B 688079913 688080566 653 True 390.000000 390 78.009000 1084 1740 1 chr6B.!!$R6 656
9 TraesCS6B01G415100 chr6D 452929838 452931905 2067 True 914.500000 1330 82.356000 1531 3667 2 chr6D.!!$R3 2136
10 TraesCS6B01G415100 chr6D 452905494 452912211 6717 False 866.257143 2532 90.310143 295 4122 7 chr6D.!!$F3 3827
11 TraesCS6B01G415100 chr6D 452839719 452842638 2919 False 803.500000 1182 80.305000 1085 3573 2 chr6D.!!$F2 2488
12 TraesCS6B01G415100 chr6D 452484964 452485823 859 True 584.000000 584 79.260000 1059 1940 1 chr6D.!!$R2 881
13 TraesCS6B01G415100 chr6A 598859200 598862566 3366 False 906.500000 2527 85.629500 956 4570 4 chr6A.!!$F2 3614
14 TraesCS6B01G415100 chr6A 598925890 598926820 930 True 651.000000 651 79.877000 957 1912 1 chr6A.!!$R2 955
15 TraesCS6B01G415100 chr6A 598156809 598157654 845 True 592.000000 592 79.636000 1073 1940 1 chr6A.!!$R1 867

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
393 396 0.037590 ATTTGACGCTAAGTGGCCCA 59.962 50.0 0.00 0.0 0.00 5.36 F
1377 1452 0.036388 ACAAGGCGTACATGACCCTG 60.036 55.0 0.00 0.0 31.29 4.45 F
2519 4465 0.177141 GTTCCTATAGTGGCACCGCA 59.823 55.0 15.27 0.0 0.00 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2276 2938 0.036732 TTGCAGGAAGAGCCAACGAT 59.963 50.0 0.00 0.00 40.02 3.73 R
3225 5173 0.392998 GCTGTCATGAACCCGGACAT 60.393 55.0 0.73 2.63 40.44 3.06 R
4387 6734 0.035630 GCTCTGCTCATCCCAACTGT 60.036 55.0 0.00 0.00 0.00 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.326766 CGGCCCACAAACTGCGTG 62.327 66.667 0.00 0.00 0.00 5.34
18 19 4.645921 GGCCCACAAACTGCGTGC 62.646 66.667 0.00 0.00 32.85 5.34
19 20 4.645921 GCCCACAAACTGCGTGCC 62.646 66.667 0.00 0.00 32.85 5.01
20 21 3.977244 CCCACAAACTGCGTGCCC 61.977 66.667 0.00 0.00 32.85 5.36
21 22 2.906897 CCACAAACTGCGTGCCCT 60.907 61.111 0.00 0.00 32.85 5.19
22 23 1.599518 CCACAAACTGCGTGCCCTA 60.600 57.895 0.00 0.00 32.85 3.53
23 24 1.169661 CCACAAACTGCGTGCCCTAA 61.170 55.000 0.00 0.00 32.85 2.69
24 25 0.665835 CACAAACTGCGTGCCCTAAA 59.334 50.000 0.00 0.00 0.00 1.85
25 26 1.269448 CACAAACTGCGTGCCCTAAAT 59.731 47.619 0.00 0.00 0.00 1.40
26 27 1.539827 ACAAACTGCGTGCCCTAAATC 59.460 47.619 0.00 0.00 0.00 2.17
27 28 1.135402 CAAACTGCGTGCCCTAAATCC 60.135 52.381 0.00 0.00 0.00 3.01
28 29 0.679960 AACTGCGTGCCCTAAATCCC 60.680 55.000 0.00 0.00 0.00 3.85
29 30 2.124901 TGCGTGCCCTAAATCCCG 60.125 61.111 0.00 0.00 0.00 5.14
30 31 2.124860 GCGTGCCCTAAATCCCGT 60.125 61.111 0.00 0.00 0.00 5.28
31 32 2.178235 GCGTGCCCTAAATCCCGTC 61.178 63.158 0.00 0.00 0.00 4.79
32 33 1.881252 CGTGCCCTAAATCCCGTCG 60.881 63.158 0.00 0.00 0.00 5.12
33 34 1.219935 GTGCCCTAAATCCCGTCGT 59.780 57.895 0.00 0.00 0.00 4.34
34 35 0.392060 GTGCCCTAAATCCCGTCGTT 60.392 55.000 0.00 0.00 0.00 3.85
35 36 0.325602 TGCCCTAAATCCCGTCGTTT 59.674 50.000 0.00 0.00 0.00 3.60
36 37 0.730840 GCCCTAAATCCCGTCGTTTG 59.269 55.000 0.00 0.00 0.00 2.93
37 38 1.947212 GCCCTAAATCCCGTCGTTTGT 60.947 52.381 0.00 0.00 0.00 2.83
38 39 2.677613 GCCCTAAATCCCGTCGTTTGTA 60.678 50.000 0.00 0.00 0.00 2.41
39 40 3.800531 CCCTAAATCCCGTCGTTTGTAT 58.199 45.455 0.00 0.00 0.00 2.29
40 41 4.193865 CCCTAAATCCCGTCGTTTGTATT 58.806 43.478 0.00 0.00 0.00 1.89
41 42 4.034742 CCCTAAATCCCGTCGTTTGTATTG 59.965 45.833 0.00 0.00 0.00 1.90
42 43 4.632688 CCTAAATCCCGTCGTTTGTATTGT 59.367 41.667 0.00 0.00 0.00 2.71
43 44 4.413495 AAATCCCGTCGTTTGTATTGTG 57.587 40.909 0.00 0.00 0.00 3.33
44 45 2.529780 TCCCGTCGTTTGTATTGTGT 57.470 45.000 0.00 0.00 0.00 3.72
45 46 2.836262 TCCCGTCGTTTGTATTGTGTT 58.164 42.857 0.00 0.00 0.00 3.32
46 47 3.987547 TCCCGTCGTTTGTATTGTGTTA 58.012 40.909 0.00 0.00 0.00 2.41
47 48 4.375272 TCCCGTCGTTTGTATTGTGTTAA 58.625 39.130 0.00 0.00 0.00 2.01
48 49 4.813161 TCCCGTCGTTTGTATTGTGTTAAA 59.187 37.500 0.00 0.00 0.00 1.52
49 50 5.295292 TCCCGTCGTTTGTATTGTGTTAAAA 59.705 36.000 0.00 0.00 0.00 1.52
50 51 5.970023 CCCGTCGTTTGTATTGTGTTAAAAA 59.030 36.000 0.00 0.00 0.00 1.94
71 72 5.806366 AAAACGGTAATGATAACTTCCGG 57.194 39.130 0.00 0.00 41.82 5.14
72 73 4.741321 AACGGTAATGATAACTTCCGGA 57.259 40.909 0.00 0.00 41.82 5.14
73 74 4.050852 ACGGTAATGATAACTTCCGGAC 57.949 45.455 1.83 0.00 41.82 4.79
74 75 3.047796 CGGTAATGATAACTTCCGGACG 58.952 50.000 1.83 4.48 35.25 4.79
75 76 3.489738 CGGTAATGATAACTTCCGGACGT 60.490 47.826 7.96 7.96 35.25 4.34
76 77 4.436332 GGTAATGATAACTTCCGGACGTT 58.564 43.478 27.07 27.07 0.00 3.99
77 78 4.505556 GGTAATGATAACTTCCGGACGTTC 59.494 45.833 27.64 16.32 0.00 3.95
78 79 2.267188 TGATAACTTCCGGACGTTCG 57.733 50.000 27.64 9.95 0.00 3.95
85 86 3.277133 CCGGACGTTCGGGAGTTA 58.723 61.111 28.28 0.00 45.78 2.24
86 87 1.586028 CCGGACGTTCGGGAGTTAA 59.414 57.895 28.28 0.00 45.78 2.01
87 88 0.457337 CCGGACGTTCGGGAGTTAAG 60.457 60.000 28.28 0.00 45.78 1.85
88 89 1.074872 CGGACGTTCGGGAGTTAAGC 61.075 60.000 8.83 0.00 0.00 3.09
89 90 0.037975 GGACGTTCGGGAGTTAAGCA 60.038 55.000 0.00 0.00 0.00 3.91
90 91 1.405121 GGACGTTCGGGAGTTAAGCAT 60.405 52.381 0.00 0.00 0.00 3.79
91 92 1.659098 GACGTTCGGGAGTTAAGCATG 59.341 52.381 0.00 0.00 0.00 4.06
92 93 1.006832 CGTTCGGGAGTTAAGCATGG 58.993 55.000 0.00 0.00 0.00 3.66
93 94 0.733150 GTTCGGGAGTTAAGCATGGC 59.267 55.000 0.00 0.00 0.00 4.40
94 95 0.326595 TTCGGGAGTTAAGCATGGCA 59.673 50.000 0.00 0.00 0.00 4.92
95 96 0.326595 TCGGGAGTTAAGCATGGCAA 59.673 50.000 0.00 0.00 0.00 4.52
96 97 0.451783 CGGGAGTTAAGCATGGCAAC 59.548 55.000 0.00 0.00 0.00 4.17
97 98 0.817654 GGGAGTTAAGCATGGCAACC 59.182 55.000 0.00 0.00 0.00 3.77
98 99 1.544724 GGAGTTAAGCATGGCAACCA 58.455 50.000 0.00 0.00 38.19 3.67
99 100 1.474077 GGAGTTAAGCATGGCAACCAG 59.526 52.381 0.00 0.00 36.75 4.00
100 101 2.436417 GAGTTAAGCATGGCAACCAGA 58.564 47.619 0.00 0.00 36.75 3.86
101 102 2.819608 GAGTTAAGCATGGCAACCAGAA 59.180 45.455 0.00 0.00 36.75 3.02
102 103 2.558359 AGTTAAGCATGGCAACCAGAAC 59.442 45.455 0.00 0.00 36.75 3.01
103 104 2.284754 TAAGCATGGCAACCAGAACA 57.715 45.000 0.00 0.00 36.75 3.18
104 105 0.963962 AAGCATGGCAACCAGAACAG 59.036 50.000 0.00 0.00 36.75 3.16
105 106 0.896940 AGCATGGCAACCAGAACAGG 60.897 55.000 0.00 0.00 36.75 4.00
106 107 1.181098 GCATGGCAACCAGAACAGGT 61.181 55.000 0.00 0.00 45.91 4.00
115 116 3.073274 ACCAGAACAGGTTTAGATGGC 57.927 47.619 0.00 0.00 39.34 4.40
116 117 2.375174 ACCAGAACAGGTTTAGATGGCA 59.625 45.455 0.00 0.00 39.34 4.92
117 118 3.181434 ACCAGAACAGGTTTAGATGGCAA 60.181 43.478 0.00 0.00 39.34 4.52
118 119 3.441572 CCAGAACAGGTTTAGATGGCAAG 59.558 47.826 0.00 0.00 0.00 4.01
119 120 4.074970 CAGAACAGGTTTAGATGGCAAGT 58.925 43.478 0.00 0.00 0.00 3.16
120 121 4.520492 CAGAACAGGTTTAGATGGCAAGTT 59.480 41.667 0.00 0.00 0.00 2.66
121 122 5.010012 CAGAACAGGTTTAGATGGCAAGTTT 59.990 40.000 0.00 0.00 0.00 2.66
122 123 6.206634 CAGAACAGGTTTAGATGGCAAGTTTA 59.793 38.462 0.00 0.00 0.00 2.01
123 124 6.431234 AGAACAGGTTTAGATGGCAAGTTTAG 59.569 38.462 0.00 0.00 0.00 1.85
124 125 5.631119 ACAGGTTTAGATGGCAAGTTTAGT 58.369 37.500 0.00 0.00 0.00 2.24
125 126 6.068670 ACAGGTTTAGATGGCAAGTTTAGTT 58.931 36.000 0.00 0.00 0.00 2.24
126 127 6.549736 ACAGGTTTAGATGGCAAGTTTAGTTT 59.450 34.615 0.00 0.00 0.00 2.66
127 128 6.863126 CAGGTTTAGATGGCAAGTTTAGTTTG 59.137 38.462 0.00 0.00 0.00 2.93
128 129 6.549736 AGGTTTAGATGGCAAGTTTAGTTTGT 59.450 34.615 0.00 0.00 0.00 2.83
129 130 6.640907 GGTTTAGATGGCAAGTTTAGTTTGTG 59.359 38.462 0.00 0.00 0.00 3.33
130 131 6.952773 TTAGATGGCAAGTTTAGTTTGTGT 57.047 33.333 0.00 0.00 0.00 3.72
131 132 5.186996 AGATGGCAAGTTTAGTTTGTGTG 57.813 39.130 0.00 0.00 0.00 3.82
132 133 4.887071 AGATGGCAAGTTTAGTTTGTGTGA 59.113 37.500 0.00 0.00 0.00 3.58
133 134 4.630894 TGGCAAGTTTAGTTTGTGTGAG 57.369 40.909 0.00 0.00 0.00 3.51
134 135 4.265893 TGGCAAGTTTAGTTTGTGTGAGA 58.734 39.130 0.00 0.00 0.00 3.27
135 136 4.887071 TGGCAAGTTTAGTTTGTGTGAGAT 59.113 37.500 0.00 0.00 0.00 2.75
136 137 5.359576 TGGCAAGTTTAGTTTGTGTGAGATT 59.640 36.000 0.00 0.00 0.00 2.40
137 138 6.544197 TGGCAAGTTTAGTTTGTGTGAGATTA 59.456 34.615 0.00 0.00 0.00 1.75
138 139 7.078228 GGCAAGTTTAGTTTGTGTGAGATTAG 58.922 38.462 0.00 0.00 0.00 1.73
139 140 7.078228 GCAAGTTTAGTTTGTGTGAGATTAGG 58.922 38.462 0.00 0.00 0.00 2.69
140 141 7.584987 CAAGTTTAGTTTGTGTGAGATTAGGG 58.415 38.462 0.00 0.00 0.00 3.53
141 142 7.074653 AGTTTAGTTTGTGTGAGATTAGGGA 57.925 36.000 0.00 0.00 0.00 4.20
142 143 7.514721 AGTTTAGTTTGTGTGAGATTAGGGAA 58.485 34.615 0.00 0.00 0.00 3.97
143 144 7.996644 AGTTTAGTTTGTGTGAGATTAGGGAAA 59.003 33.333 0.00 0.00 0.00 3.13
144 145 7.739498 TTAGTTTGTGTGAGATTAGGGAAAC 57.261 36.000 0.00 0.00 0.00 2.78
145 146 5.690865 AGTTTGTGTGAGATTAGGGAAACA 58.309 37.500 0.00 0.00 0.00 2.83
146 147 6.306987 AGTTTGTGTGAGATTAGGGAAACAT 58.693 36.000 0.00 0.00 0.00 2.71
147 148 6.207417 AGTTTGTGTGAGATTAGGGAAACATG 59.793 38.462 0.00 0.00 0.00 3.21
148 149 4.588899 TGTGTGAGATTAGGGAAACATGG 58.411 43.478 0.00 0.00 0.00 3.66
149 150 3.378427 GTGTGAGATTAGGGAAACATGGC 59.622 47.826 0.00 0.00 0.00 4.40
150 151 3.010027 TGTGAGATTAGGGAAACATGGCA 59.990 43.478 0.00 0.00 0.00 4.92
151 152 4.016444 GTGAGATTAGGGAAACATGGCAA 58.984 43.478 0.00 0.00 0.00 4.52
152 153 4.646492 GTGAGATTAGGGAAACATGGCAAT 59.354 41.667 0.00 0.00 0.00 3.56
153 154 5.127682 GTGAGATTAGGGAAACATGGCAATT 59.872 40.000 0.00 0.00 0.00 2.32
154 155 5.721000 TGAGATTAGGGAAACATGGCAATTT 59.279 36.000 0.00 0.00 0.00 1.82
155 156 6.213195 TGAGATTAGGGAAACATGGCAATTTT 59.787 34.615 0.00 0.00 0.00 1.82
156 157 6.643388 AGATTAGGGAAACATGGCAATTTTC 58.357 36.000 13.20 13.20 0.00 2.29
157 158 6.441604 AGATTAGGGAAACATGGCAATTTTCT 59.558 34.615 18.32 13.01 31.21 2.52
158 159 4.276058 AGGGAAACATGGCAATTTTCTG 57.724 40.909 18.32 3.57 31.21 3.02
159 160 3.903090 AGGGAAACATGGCAATTTTCTGA 59.097 39.130 18.32 0.00 31.21 3.27
160 161 3.996363 GGGAAACATGGCAATTTTCTGAC 59.004 43.478 18.32 9.54 31.21 3.51
161 162 4.502950 GGGAAACATGGCAATTTTCTGACA 60.503 41.667 18.32 0.00 39.14 3.58
162 163 5.055812 GGAAACATGGCAATTTTCTGACAA 58.944 37.500 18.32 0.00 38.03 3.18
163 164 5.526846 GGAAACATGGCAATTTTCTGACAAA 59.473 36.000 18.32 0.00 38.03 2.83
164 165 6.038050 GGAAACATGGCAATTTTCTGACAAAA 59.962 34.615 18.32 0.00 38.03 2.44
165 166 6.998968 AACATGGCAATTTTCTGACAAAAA 57.001 29.167 0.00 0.00 38.03 1.94
197 198 2.575532 ACGAAGTTGCCATCCCATATG 58.424 47.619 0.00 0.00 37.78 1.78
198 199 2.172505 ACGAAGTTGCCATCCCATATGA 59.827 45.455 3.65 0.00 37.78 2.15
199 200 3.213506 CGAAGTTGCCATCCCATATGAA 58.786 45.455 3.65 0.00 0.00 2.57
200 201 3.003689 CGAAGTTGCCATCCCATATGAAC 59.996 47.826 3.65 0.00 0.00 3.18
201 202 3.959495 AGTTGCCATCCCATATGAACT 57.041 42.857 3.65 1.07 0.00 3.01
202 203 5.376625 GAAGTTGCCATCCCATATGAACTA 58.623 41.667 3.65 0.00 0.00 2.24
203 204 5.387113 AGTTGCCATCCCATATGAACTAA 57.613 39.130 3.65 0.00 0.00 2.24
204 205 5.765510 AGTTGCCATCCCATATGAACTAAA 58.234 37.500 3.65 0.00 0.00 1.85
205 206 5.829924 AGTTGCCATCCCATATGAACTAAAG 59.170 40.000 3.65 0.00 0.00 1.85
206 207 5.387113 TGCCATCCCATATGAACTAAAGT 57.613 39.130 3.65 0.00 0.00 2.66
207 208 5.765510 TGCCATCCCATATGAACTAAAGTT 58.234 37.500 3.65 0.00 41.64 2.66
208 209 6.194235 TGCCATCCCATATGAACTAAAGTTT 58.806 36.000 3.65 0.00 38.56 2.66
209 210 6.321181 TGCCATCCCATATGAACTAAAGTTTC 59.679 38.462 3.65 0.00 38.56 2.78
210 211 6.239036 GCCATCCCATATGAACTAAAGTTTCC 60.239 42.308 3.65 0.00 38.56 3.13
211 212 6.833416 CCATCCCATATGAACTAAAGTTTCCA 59.167 38.462 3.65 0.00 38.56 3.53
212 213 7.506938 CCATCCCATATGAACTAAAGTTTCCAT 59.493 37.037 3.65 0.33 38.56 3.41
213 214 7.880160 TCCCATATGAACTAAAGTTTCCATG 57.120 36.000 3.65 1.82 38.56 3.66
214 215 7.410174 TCCCATATGAACTAAAGTTTCCATGT 58.590 34.615 3.65 0.00 38.56 3.21
215 216 8.553153 TCCCATATGAACTAAAGTTTCCATGTA 58.447 33.333 3.65 0.00 38.56 2.29
216 217 9.184523 CCCATATGAACTAAAGTTTCCATGTAA 57.815 33.333 3.65 0.00 38.56 2.41
245 246 5.890110 TTCGAGACGAAATGCTCAATATC 57.110 39.130 4.13 0.00 43.00 1.63
246 247 4.299155 TCGAGACGAAATGCTCAATATCC 58.701 43.478 0.00 0.00 31.06 2.59
247 248 3.120286 CGAGACGAAATGCTCAATATCCG 59.880 47.826 0.00 0.00 0.00 4.18
248 249 4.299155 GAGACGAAATGCTCAATATCCGA 58.701 43.478 0.00 0.00 0.00 4.55
249 250 4.693283 AGACGAAATGCTCAATATCCGAA 58.307 39.130 0.00 0.00 0.00 4.30
250 251 4.508124 AGACGAAATGCTCAATATCCGAAC 59.492 41.667 0.00 0.00 0.00 3.95
251 252 4.442706 ACGAAATGCTCAATATCCGAACT 58.557 39.130 0.00 0.00 0.00 3.01
252 253 4.271049 ACGAAATGCTCAATATCCGAACTG 59.729 41.667 0.00 0.00 0.00 3.16
253 254 4.271049 CGAAATGCTCAATATCCGAACTGT 59.729 41.667 0.00 0.00 0.00 3.55
254 255 5.220662 CGAAATGCTCAATATCCGAACTGTT 60.221 40.000 0.00 0.00 0.00 3.16
255 256 5.741388 AATGCTCAATATCCGAACTGTTC 57.259 39.130 10.48 10.48 0.00 3.18
268 269 3.934068 GAACTGTTCGGGAGTTATTGGA 58.066 45.455 4.57 0.00 33.71 3.53
269 270 4.514401 GAACTGTTCGGGAGTTATTGGAT 58.486 43.478 4.57 0.00 33.71 3.41
270 271 4.569719 ACTGTTCGGGAGTTATTGGATT 57.430 40.909 0.00 0.00 0.00 3.01
271 272 4.514401 ACTGTTCGGGAGTTATTGGATTC 58.486 43.478 0.00 0.00 0.00 2.52
272 273 3.877508 CTGTTCGGGAGTTATTGGATTCC 59.122 47.826 0.00 0.00 0.00 3.01
273 274 3.521937 TGTTCGGGAGTTATTGGATTCCT 59.478 43.478 3.95 0.00 0.00 3.36
274 275 4.717778 TGTTCGGGAGTTATTGGATTCCTA 59.282 41.667 3.95 0.00 0.00 2.94
275 276 5.190132 TGTTCGGGAGTTATTGGATTCCTAA 59.810 40.000 3.95 0.00 0.00 2.69
276 277 5.961398 TCGGGAGTTATTGGATTCCTAAA 57.039 39.130 3.95 0.00 0.00 1.85
277 278 6.316280 TCGGGAGTTATTGGATTCCTAAAA 57.684 37.500 3.95 0.00 0.00 1.52
278 279 6.723339 TCGGGAGTTATTGGATTCCTAAAAA 58.277 36.000 3.95 0.00 0.00 1.94
293 294 3.996614 AAAAATCACGCGGGGAGG 58.003 55.556 9.32 0.00 0.00 4.30
305 306 1.002011 GGGGAGGCTGAAACAGACC 60.002 63.158 0.00 3.14 41.11 3.85
310 311 0.398318 AGGCTGAAACAGACCTGACC 59.602 55.000 3.76 0.34 41.11 4.02
311 312 0.951040 GGCTGAAACAGACCTGACCG 60.951 60.000 3.76 0.00 32.43 4.79
312 313 0.249911 GCTGAAACAGACCTGACCGT 60.250 55.000 3.76 0.00 32.44 4.83
314 315 2.927014 GCTGAAACAGACCTGACCGTAG 60.927 54.545 3.76 0.00 32.44 3.51
364 366 3.678056 AGCGTAAATTGACTGACCTGA 57.322 42.857 0.00 0.00 0.00 3.86
373 376 1.222115 GACTGACCTGACACGCCAAC 61.222 60.000 0.00 0.00 0.00 3.77
382 385 0.996727 GACACGCCAACATTTGACGC 60.997 55.000 0.00 0.00 40.31 5.19
386 389 1.196808 ACGCCAACATTTGACGCTAAG 59.803 47.619 0.00 0.00 40.31 2.18
387 390 1.196808 CGCCAACATTTGACGCTAAGT 59.803 47.619 0.00 0.00 28.05 2.24
388 391 2.584791 GCCAACATTTGACGCTAAGTG 58.415 47.619 0.00 0.00 0.00 3.16
389 392 2.668279 GCCAACATTTGACGCTAAGTGG 60.668 50.000 0.00 0.00 0.00 4.00
390 393 2.584791 CAACATTTGACGCTAAGTGGC 58.415 47.619 0.00 0.00 0.00 5.01
391 394 1.165270 ACATTTGACGCTAAGTGGCC 58.835 50.000 0.00 0.00 0.00 5.36
393 396 0.037590 ATTTGACGCTAAGTGGCCCA 59.962 50.000 0.00 0.00 0.00 5.36
440 445 1.805345 CTGCTCAAGCTGTTTCCTCAG 59.195 52.381 3.32 0.00 42.66 3.35
442 447 2.158769 TGCTCAAGCTGTTTCCTCAGAA 60.159 45.455 3.32 0.00 42.66 3.02
445 450 4.202050 GCTCAAGCTGTTTCCTCAGAAAAA 60.202 41.667 0.00 0.00 39.75 1.94
504 523 1.806542 CCCTCGTTGTTCCAACATCTG 59.193 52.381 7.76 0.00 38.95 2.90
508 527 4.152402 CCTCGTTGTTCCAACATCTGTTAG 59.848 45.833 7.76 0.00 38.95 2.34
544 569 3.027974 ACTCGAGCTTAAGGTGTTCAC 57.972 47.619 12.82 0.00 0.00 3.18
546 571 1.610038 TCGAGCTTAAGGTGTTCACGA 59.390 47.619 12.82 11.30 0.00 4.35
578 603 1.188219 AAGAGACGCAGGGAAGCAGA 61.188 55.000 0.00 0.00 0.00 4.26
593 618 1.020333 GCAGAGTGCAGAAGGCTGAG 61.020 60.000 0.00 0.00 45.17 3.35
653 678 0.902531 AGGTGGTTAGGGACACATCG 59.097 55.000 0.00 0.00 39.31 3.84
679 704 1.604185 GCAGTTGAGACGAAGCAGAGT 60.604 52.381 0.00 0.00 0.00 3.24
689 714 2.036475 ACGAAGCAGAGTGTGAGACAAT 59.964 45.455 0.00 0.00 0.00 2.71
698 723 3.480470 AGTGTGAGACAATTTGGGTCAG 58.520 45.455 0.78 0.00 37.74 3.51
702 727 2.622942 TGAGACAATTTGGGTCAGTTGC 59.377 45.455 0.78 0.00 37.74 4.17
742 769 0.668535 GTCCACTTGACAACTTGGGC 59.331 55.000 10.08 5.79 43.85 5.36
743 770 0.817634 TCCACTTGACAACTTGGGCG 60.818 55.000 10.08 0.00 0.00 6.13
775 802 2.045926 GCACGCCATGGAAGACCT 60.046 61.111 18.40 0.00 37.04 3.85
790 817 0.324943 GACCTGCCAAGTCAAGCCTA 59.675 55.000 0.00 0.00 34.27 3.93
884 913 1.733399 GTCACTGGTCGTCGCCTTC 60.733 63.158 7.14 0.00 0.00 3.46
889 918 2.225791 CTGGTCGTCGCCTTCCATCA 62.226 60.000 7.14 0.00 0.00 3.07
899 928 1.571919 CCTTCCATCAATCGTCGGTC 58.428 55.000 0.00 0.00 0.00 4.79
931 960 3.067106 CGTTCACTGAACTAGCCAATGT 58.933 45.455 17.81 0.00 40.05 2.71
935 964 5.222079 TCACTGAACTAGCCAATGTGTAA 57.778 39.130 0.00 0.00 0.00 2.41
936 965 5.237815 TCACTGAACTAGCCAATGTGTAAG 58.762 41.667 0.00 0.00 0.00 2.34
982 1025 1.964223 AGAGCAACCAACGAGAGAGAA 59.036 47.619 0.00 0.00 0.00 2.87
984 1027 2.734079 GAGCAACCAACGAGAGAGAAAG 59.266 50.000 0.00 0.00 0.00 2.62
1015 1061 0.527817 GAGAATGGCGACCACCGTAG 60.528 60.000 0.50 0.00 41.15 3.51
1030 1076 1.150567 CGTAGTGCTGCTGCTGATCC 61.151 60.000 17.00 0.66 40.48 3.36
1032 1078 1.410517 GTAGTGCTGCTGCTGATCCTA 59.589 52.381 17.00 6.33 40.48 2.94
1035 1081 0.907486 TGCTGCTGCTGATCCTACTT 59.093 50.000 17.00 0.00 40.48 2.24
1051 1097 1.597854 CTTCACTTGCTGGTGGCGA 60.598 57.895 9.11 0.00 45.43 5.54
1052 1098 1.153066 TTCACTTGCTGGTGGCGAA 60.153 52.632 9.11 0.00 45.43 4.70
1170 1218 4.789075 GGCTGCTACCGCGACGAA 62.789 66.667 8.23 0.00 39.65 3.85
1278 1347 2.519780 GCGGACCTCTCCCTCGAT 60.520 66.667 0.00 0.00 31.93 3.59
1377 1452 0.036388 ACAAGGCGTACATGACCCTG 60.036 55.000 0.00 0.00 31.29 4.45
1391 1466 2.238701 CCCTGTTAGGCACCCCCTT 61.239 63.158 0.00 0.00 43.06 3.95
1412 1487 1.203523 CCTCTTCTCGTCCACCAAGAG 59.796 57.143 0.00 0.00 41.04 2.85
1458 1533 0.683504 ACCTCGGCTACTTCGTCCAT 60.684 55.000 0.00 0.00 0.00 3.41
1695 1797 1.204941 GAGTGGTTCAGCTACACCGAT 59.795 52.381 8.60 0.65 35.60 4.18
1922 2037 4.503123 CCTCGACAATGGATGCATAGGTAA 60.503 45.833 0.00 0.00 0.00 2.85
1953 2459 9.452287 TCTGAATTTCTGATTCATTACATGTCA 57.548 29.630 0.00 0.00 37.40 3.58
1954 2460 9.499585 CTGAATTTCTGATTCATTACATGTCAC 57.500 33.333 0.00 0.00 37.40 3.67
1955 2461 9.012161 TGAATTTCTGATTCATTACATGTCACA 57.988 29.630 0.00 0.00 33.55 3.58
1956 2462 9.282247 GAATTTCTGATTCATTACATGTCACAC 57.718 33.333 0.00 0.00 0.00 3.82
1957 2463 6.407475 TTCTGATTCATTACATGTCACACG 57.593 37.500 0.00 0.00 0.00 4.49
1958 2464 5.719173 TCTGATTCATTACATGTCACACGA 58.281 37.500 0.00 0.00 0.00 4.35
1959 2465 5.576774 TCTGATTCATTACATGTCACACGAC 59.423 40.000 0.00 0.00 42.93 4.34
1961 2467 5.348451 TGATTCATTACATGTCACACGACTG 59.652 40.000 0.00 0.00 43.06 3.51
1962 2468 4.251543 TCATTACATGTCACACGACTGT 57.748 40.909 0.00 0.00 43.06 3.55
2015 2596 7.754069 TTTGTCTGATCAAATGTGTTGAAAC 57.246 32.000 0.00 0.00 33.23 2.78
2019 2600 5.067544 TCTGATCAAATGTGTTGAAACTGCA 59.932 36.000 0.00 0.00 31.55 4.41
2037 2618 7.395190 AACTGCATTGCAAACTGAAGATATA 57.605 32.000 13.91 0.00 38.41 0.86
2047 2628 4.475763 ACTGAAGATATAGACGAGTGCG 57.524 45.455 0.00 0.00 44.79 5.34
2051 2632 4.334481 TGAAGATATAGACGAGTGCGAACA 59.666 41.667 0.00 0.00 41.64 3.18
2067 2648 6.199393 GTGCGAACACAAAGAAAATTACTCT 58.801 36.000 0.00 0.00 46.61 3.24
2142 2731 3.446161 CGGGTACTAGTGGAGATGTCAAA 59.554 47.826 5.39 0.00 0.00 2.69
2143 2732 4.440250 CGGGTACTAGTGGAGATGTCAAAG 60.440 50.000 5.39 0.00 0.00 2.77
2144 2733 4.466726 GGGTACTAGTGGAGATGTCAAAGT 59.533 45.833 5.39 0.00 0.00 2.66
2145 2734 5.394333 GGGTACTAGTGGAGATGTCAAAGTC 60.394 48.000 5.39 0.00 0.00 3.01
2175 2764 1.244019 GCCGGCCAGATGACAAGTTT 61.244 55.000 18.11 0.00 0.00 2.66
2178 2767 2.422597 CGGCCAGATGACAAGTTTACA 58.577 47.619 2.24 0.00 0.00 2.41
2245 2907 4.036734 CACCTTAGCTTTGCAAACTGAAGA 59.963 41.667 8.05 0.00 0.00 2.87
2246 2908 4.829492 ACCTTAGCTTTGCAAACTGAAGAT 59.171 37.500 8.05 0.00 0.00 2.40
2247 2909 6.003950 ACCTTAGCTTTGCAAACTGAAGATA 58.996 36.000 8.05 0.00 0.00 1.98
2248 2910 6.660949 ACCTTAGCTTTGCAAACTGAAGATAT 59.339 34.615 8.05 0.00 0.00 1.63
2249 2911 7.148171 ACCTTAGCTTTGCAAACTGAAGATATC 60.148 37.037 8.05 0.00 0.00 1.63
2250 2912 7.148188 CCTTAGCTTTGCAAACTGAAGATATCA 60.148 37.037 8.05 0.00 36.38 2.15
2251 2913 6.579666 AGCTTTGCAAACTGAAGATATCAA 57.420 33.333 8.05 0.00 37.67 2.57
2252 2914 7.166691 AGCTTTGCAAACTGAAGATATCAAT 57.833 32.000 8.05 0.00 37.67 2.57
2253 2915 8.284945 AGCTTTGCAAACTGAAGATATCAATA 57.715 30.769 8.05 0.00 37.67 1.90
2254 2916 8.742777 AGCTTTGCAAACTGAAGATATCAATAA 58.257 29.630 8.05 0.00 37.67 1.40
2255 2917 9.525409 GCTTTGCAAACTGAAGATATCAATAAT 57.475 29.630 8.05 0.00 37.67 1.28
2257 2919 8.861033 TTGCAAACTGAAGATATCAATAATGC 57.139 30.769 5.32 7.14 37.67 3.56
2258 2920 7.998580 TGCAAACTGAAGATATCAATAATGCA 58.001 30.769 5.32 9.46 39.26 3.96
2276 2938 5.559427 ATGCAACATATTTCACGCTTGTA 57.441 34.783 0.00 0.00 0.00 2.41
2278 2940 5.568482 TGCAACATATTTCACGCTTGTATC 58.432 37.500 0.00 0.00 0.00 2.24
2284 2946 0.793861 TTCACGCTTGTATCGTTGGC 59.206 50.000 0.00 0.00 38.19 4.52
2287 2949 0.246635 ACGCTTGTATCGTTGGCTCT 59.753 50.000 0.00 0.00 36.72 4.09
2302 2964 4.989279 TGGCTCTTCCTGCAATTTATTC 57.011 40.909 0.00 0.00 35.26 1.75
2308 2970 2.930950 TCCTGCAATTTATTCTCGGGG 58.069 47.619 0.00 0.00 0.00 5.73
2309 2971 1.956477 CCTGCAATTTATTCTCGGGGG 59.044 52.381 0.00 0.00 0.00 5.40
2317 2979 3.639672 TTATTCTCGGGGGTCCTTTTC 57.360 47.619 0.00 0.00 0.00 2.29
2326 4243 3.096852 GGGGGTCCTTTTCTACAAATGG 58.903 50.000 0.00 0.00 37.91 3.16
2340 4257 3.490348 ACAAATGGTGTTCTTCCTGGAG 58.510 45.455 0.00 0.00 37.01 3.86
2360 4277 6.763355 TGGAGATCTAAACTAATGATGGAGC 58.237 40.000 0.00 0.00 0.00 4.70
2366 4301 7.618019 TCTAAACTAATGATGGAGCATAGGT 57.382 36.000 0.00 0.00 0.00 3.08
2395 4330 0.883370 GGGGTGTTCTTGTCGGTGTC 60.883 60.000 0.00 0.00 0.00 3.67
2507 4453 2.997899 GCAGCAGATGCGTTCCTAT 58.002 52.632 0.00 0.00 46.99 2.57
2519 4465 0.177141 GTTCCTATAGTGGCACCGCA 59.823 55.000 15.27 0.00 0.00 5.69
2543 4489 3.059386 GGCGGTGGCGGATTCAAA 61.059 61.111 0.00 0.00 41.24 2.69
3225 5173 1.002274 GAGGAGGGAAGGAGCCTCA 59.998 63.158 0.00 0.00 44.91 3.86
3275 5223 1.681166 GGTGGACACTACGAGCTCCTA 60.681 57.143 8.47 0.00 0.00 2.94
3305 5253 1.064463 GTGAGAAATGAGATGGGGCCA 60.064 52.381 4.39 0.00 0.00 5.36
3646 5604 5.888161 ACTCCTTTCAAGTCTGACACAAATT 59.112 36.000 10.88 0.00 0.00 1.82
3653 5611 8.682128 TTCAAGTCTGACACAAATTTGTAAAC 57.318 30.769 22.87 16.31 39.91 2.01
3697 5655 5.401531 AAAAACTGTATCTCGCTCCTGTA 57.598 39.130 0.00 0.00 0.00 2.74
3698 5656 4.640789 AAACTGTATCTCGCTCCTGTAG 57.359 45.455 0.00 0.00 0.00 2.74
3699 5657 3.284793 ACTGTATCTCGCTCCTGTAGT 57.715 47.619 0.00 0.00 0.00 2.73
3700 5658 3.207778 ACTGTATCTCGCTCCTGTAGTC 58.792 50.000 0.00 0.00 0.00 2.59
3703 5661 1.686355 ATCTCGCTCCTGTAGTCCTG 58.314 55.000 0.00 0.00 0.00 3.86
3704 5662 0.328592 TCTCGCTCCTGTAGTCCTGT 59.671 55.000 0.00 0.00 0.00 4.00
3705 5663 0.453793 CTCGCTCCTGTAGTCCTGTG 59.546 60.000 0.00 0.00 0.00 3.66
3706 5664 0.251209 TCGCTCCTGTAGTCCTGTGT 60.251 55.000 0.00 0.00 0.00 3.72
3707 5665 0.171455 CGCTCCTGTAGTCCTGTGTC 59.829 60.000 0.00 0.00 0.00 3.67
3708 5666 0.171455 GCTCCTGTAGTCCTGTGTCG 59.829 60.000 0.00 0.00 0.00 4.35
3709 5667 0.171455 CTCCTGTAGTCCTGTGTCGC 59.829 60.000 0.00 0.00 0.00 5.19
3710 5668 0.251209 TCCTGTAGTCCTGTGTCGCT 60.251 55.000 0.00 0.00 0.00 4.93
3711 5669 0.603569 CCTGTAGTCCTGTGTCGCTT 59.396 55.000 0.00 0.00 0.00 4.68
3751 5709 5.569413 ACACTTCAAACACGTTTCAATCTC 58.431 37.500 0.00 0.00 0.00 2.75
3805 5765 7.809806 GTGAAATAGCTTATTTGTGAAGTTGCT 59.190 33.333 0.00 0.00 38.42 3.91
3828 5788 0.587768 TTCAGTGCGTGCAACTGATG 59.412 50.000 18.02 2.32 39.81 3.07
3836 5796 2.118683 CGTGCAACTGATGTTTTGTGG 58.881 47.619 0.00 0.00 33.52 4.17
3870 5830 9.624697 TGAACTTGAAAATGATATTTGTGTAGC 57.375 29.630 0.00 0.00 0.00 3.58
3885 5845 6.721571 TTGTGTAGCTGCTTATTTCAGTAC 57.278 37.500 7.79 0.00 34.21 2.73
3886 5846 5.789521 TGTGTAGCTGCTTATTTCAGTACA 58.210 37.500 7.79 0.00 34.21 2.90
3892 5852 7.921786 AGCTGCTTATTTCAGTACATGTTTA 57.078 32.000 2.30 0.00 34.21 2.01
3903 5863 6.598525 TCAGTACATGTTTAATGAGTTTGCG 58.401 36.000 2.30 0.00 0.00 4.85
3908 5868 9.337091 GTACATGTTTAATGAGTTTGCGTATTT 57.663 29.630 2.30 0.00 0.00 1.40
3917 5877 5.927030 TGAGTTTGCGTATTTCACTCATTC 58.073 37.500 0.00 0.00 39.12 2.67
3959 5919 8.571461 ACATAAATCTCAGCTTCTTGAAATGA 57.429 30.769 0.00 0.00 0.00 2.57
3960 5920 8.675504 ACATAAATCTCAGCTTCTTGAAATGAG 58.324 33.333 14.24 14.24 38.97 2.90
3961 5921 8.675504 CATAAATCTCAGCTTCTTGAAATGAGT 58.324 33.333 17.36 7.79 38.76 3.41
3962 5922 6.497785 AATCTCAGCTTCTTGAAATGAGTG 57.502 37.500 17.36 3.49 38.76 3.51
3963 5923 5.219343 TCTCAGCTTCTTGAAATGAGTGA 57.781 39.130 17.36 5.06 38.76 3.41
3964 5924 5.614308 TCTCAGCTTCTTGAAATGAGTGAA 58.386 37.500 17.36 4.42 38.76 3.18
3965 5925 6.057533 TCTCAGCTTCTTGAAATGAGTGAAA 58.942 36.000 17.36 4.18 38.76 2.69
3966 5926 6.713903 TCTCAGCTTCTTGAAATGAGTGAAAT 59.286 34.615 17.36 0.00 38.76 2.17
3967 5927 7.230108 TCTCAGCTTCTTGAAATGAGTGAAATT 59.770 33.333 17.36 0.00 38.76 1.82
3968 5928 8.394971 TCAGCTTCTTGAAATGAGTGAAATTA 57.605 30.769 0.00 0.00 0.00 1.40
3969 5929 8.509690 TCAGCTTCTTGAAATGAGTGAAATTAG 58.490 33.333 0.00 0.00 0.00 1.73
3970 5930 7.754027 CAGCTTCTTGAAATGAGTGAAATTAGG 59.246 37.037 0.00 0.00 0.00 2.69
3971 5931 7.449704 AGCTTCTTGAAATGAGTGAAATTAGGT 59.550 33.333 0.00 0.00 0.00 3.08
3972 5932 8.084684 GCTTCTTGAAATGAGTGAAATTAGGTT 58.915 33.333 0.00 0.00 0.00 3.50
3973 5933 9.971922 CTTCTTGAAATGAGTGAAATTAGGTTT 57.028 29.630 0.00 0.00 0.00 3.27
3983 5943 9.748708 TGAGTGAAATTAGGTTTTTGAAATGAG 57.251 29.630 0.00 0.00 0.00 2.90
3984 5944 9.965824 GAGTGAAATTAGGTTTTTGAAATGAGA 57.034 29.630 0.00 0.00 0.00 3.27
4225 6387 6.976088 TCGGTCTTTGAAATGAGCAAAATTA 58.024 32.000 8.33 0.00 35.09 1.40
4226 6388 7.083858 TCGGTCTTTGAAATGAGCAAAATTAG 58.916 34.615 8.33 0.00 35.09 1.73
4228 6390 7.382218 CGGTCTTTGAAATGAGCAAAATTAGTT 59.618 33.333 8.33 0.00 35.09 2.24
4253 6417 5.626142 TCCAAAATAGTAACCAGCAAGACA 58.374 37.500 0.00 0.00 0.00 3.41
4255 6419 6.206634 TCCAAAATAGTAACCAGCAAGACAAG 59.793 38.462 0.00 0.00 0.00 3.16
4267 6431 2.232208 GCAAGACAAGCCTGCCTATTTT 59.768 45.455 0.00 0.00 0.00 1.82
4324 6671 0.690192 CACCAGTCCACCATACACCA 59.310 55.000 0.00 0.00 0.00 4.17
4337 6684 0.035820 TACACCAAACTCCATCGCCC 60.036 55.000 0.00 0.00 0.00 6.13
4366 6713 1.964933 GTATGCTACTCCCTCTGTCCC 59.035 57.143 0.00 0.00 0.00 4.46
4367 6714 0.339859 ATGCTACTCCCTCTGTCCCA 59.660 55.000 0.00 0.00 0.00 4.37
4368 6715 0.339859 TGCTACTCCCTCTGTCCCAT 59.660 55.000 0.00 0.00 0.00 4.00
4369 6716 1.573857 TGCTACTCCCTCTGTCCCATA 59.426 52.381 0.00 0.00 0.00 2.74
4371 6718 3.243724 GCTACTCCCTCTGTCCCATAAT 58.756 50.000 0.00 0.00 0.00 1.28
4372 6719 4.140782 TGCTACTCCCTCTGTCCCATAATA 60.141 45.833 0.00 0.00 0.00 0.98
4373 6720 5.026790 GCTACTCCCTCTGTCCCATAATAT 58.973 45.833 0.00 0.00 0.00 1.28
4374 6721 6.195700 GCTACTCCCTCTGTCCCATAATATA 58.804 44.000 0.00 0.00 0.00 0.86
4375 6722 6.668283 GCTACTCCCTCTGTCCCATAATATAA 59.332 42.308 0.00 0.00 0.00 0.98
4376 6723 7.147811 GCTACTCCCTCTGTCCCATAATATAAG 60.148 44.444 0.00 0.00 0.00 1.73
4377 6724 6.875469 ACTCCCTCTGTCCCATAATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
4378 6725 7.313731 ACTCCCTCTGTCCCATAATATAAGAA 58.686 38.462 0.00 0.00 0.00 2.52
4379 6726 7.235812 ACTCCCTCTGTCCCATAATATAAGAAC 59.764 40.741 0.00 0.00 0.00 3.01
4380 6727 6.210784 TCCCTCTGTCCCATAATATAAGAACG 59.789 42.308 0.00 0.00 0.00 3.95
4381 6728 6.014499 CCCTCTGTCCCATAATATAAGAACGT 60.014 42.308 0.00 0.00 0.00 3.99
4382 6729 7.442656 CCTCTGTCCCATAATATAAGAACGTT 58.557 38.462 0.00 0.00 0.00 3.99
4383 6730 7.931948 CCTCTGTCCCATAATATAAGAACGTTT 59.068 37.037 0.46 0.00 0.00 3.60
4384 6731 9.326413 CTCTGTCCCATAATATAAGAACGTTTT 57.674 33.333 0.46 0.00 0.00 2.43
4385 6732 9.675464 TCTGTCCCATAATATAAGAACGTTTTT 57.325 29.630 9.22 9.22 0.00 1.94
4407 6754 0.747283 CAGTTGGGATGAGCAGAGCC 60.747 60.000 0.00 0.00 0.00 4.70
4423 6770 0.767375 AGCCAGCAACCAGAGAAGAA 59.233 50.000 0.00 0.00 0.00 2.52
4429 6776 3.567164 CAGCAACCAGAGAAGAACATGTT 59.433 43.478 11.78 11.78 0.00 2.71
4438 6785 5.704515 CAGAGAAGAACATGTTGAGAATGGT 59.295 40.000 17.58 0.00 0.00 3.55
4473 6823 1.595109 CTGGTCGTGCTGCACTTGA 60.595 57.895 28.04 17.22 31.34 3.02
4478 6828 0.950555 TCGTGCTGCACTTGATGGTC 60.951 55.000 28.04 1.21 31.34 4.02
4483 6833 0.603707 CTGCACTTGATGGTCGTGGT 60.604 55.000 0.00 0.00 0.00 4.16
4484 6834 0.682292 TGCACTTGATGGTCGTGGTA 59.318 50.000 0.00 0.00 0.00 3.25
4486 6836 1.359848 CACTTGATGGTCGTGGTAGC 58.640 55.000 0.00 0.00 0.00 3.58
4487 6837 0.973632 ACTTGATGGTCGTGGTAGCA 59.026 50.000 0.00 0.00 0.00 3.49
4488 6838 1.066858 ACTTGATGGTCGTGGTAGCAG 60.067 52.381 0.00 0.00 0.00 4.24
4489 6839 0.391130 TTGATGGTCGTGGTAGCAGC 60.391 55.000 0.00 0.00 34.02 5.25
4490 6840 1.878522 GATGGTCGTGGTAGCAGCG 60.879 63.158 0.00 2.65 0.00 5.18
4491 6841 2.279502 GATGGTCGTGGTAGCAGCGA 62.280 60.000 13.13 13.13 0.00 4.93
4494 6844 2.875485 TCGTGGTAGCAGCGACTC 59.125 61.111 13.13 0.00 0.00 3.36
4503 6853 4.731612 CAGCGACTCAGCGGCAGT 62.732 66.667 1.45 0.00 43.00 4.40
4564 6914 2.677524 CGTCACCGTCCCCTACCA 60.678 66.667 0.00 0.00 0.00 3.25
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.326766 CACGCAGTTTGTGGGCCG 62.327 66.667 0.00 0.00 41.61 6.13
3 4 3.977244 GGGCACGCAGTTTGTGGG 61.977 66.667 0.00 0.00 41.61 4.61
4 5 1.169661 TTAGGGCACGCAGTTTGTGG 61.170 55.000 0.00 0.00 41.61 4.17
5 6 0.665835 TTTAGGGCACGCAGTTTGTG 59.334 50.000 0.00 0.00 41.61 3.33
6 7 1.539827 GATTTAGGGCACGCAGTTTGT 59.460 47.619 0.00 0.00 41.61 2.83
7 8 1.135402 GGATTTAGGGCACGCAGTTTG 60.135 52.381 0.00 0.00 41.61 2.93
8 9 1.173913 GGATTTAGGGCACGCAGTTT 58.826 50.000 0.00 0.00 41.61 2.66
9 10 0.679960 GGGATTTAGGGCACGCAGTT 60.680 55.000 0.00 0.00 41.61 3.16
11 12 2.180204 CGGGATTTAGGGCACGCAG 61.180 63.158 0.00 0.00 0.00 5.18
12 13 2.124901 CGGGATTTAGGGCACGCA 60.125 61.111 0.00 0.00 0.00 5.24
13 14 2.124860 ACGGGATTTAGGGCACGC 60.125 61.111 0.00 0.00 33.43 5.34
14 15 1.881252 CGACGGGATTTAGGGCACG 60.881 63.158 0.00 0.00 36.88 5.34
15 16 0.392060 AACGACGGGATTTAGGGCAC 60.392 55.000 0.00 0.00 0.00 5.01
16 17 0.325602 AAACGACGGGATTTAGGGCA 59.674 50.000 0.00 0.00 0.00 5.36
17 18 0.730840 CAAACGACGGGATTTAGGGC 59.269 55.000 0.00 0.00 0.00 5.19
18 19 2.103537 ACAAACGACGGGATTTAGGG 57.896 50.000 0.00 0.00 0.00 3.53
19 20 4.632688 ACAATACAAACGACGGGATTTAGG 59.367 41.667 0.00 0.00 0.00 2.69
20 21 5.121142 ACACAATACAAACGACGGGATTTAG 59.879 40.000 0.00 0.00 0.00 1.85
21 22 4.996122 ACACAATACAAACGACGGGATTTA 59.004 37.500 0.00 0.00 0.00 1.40
22 23 3.816523 ACACAATACAAACGACGGGATTT 59.183 39.130 0.00 0.00 0.00 2.17
23 24 3.404899 ACACAATACAAACGACGGGATT 58.595 40.909 0.00 0.00 0.00 3.01
24 25 3.048337 ACACAATACAAACGACGGGAT 57.952 42.857 0.00 0.00 0.00 3.85
25 26 2.529780 ACACAATACAAACGACGGGA 57.470 45.000 0.00 0.00 0.00 5.14
26 27 4.728917 TTAACACAATACAAACGACGGG 57.271 40.909 0.00 0.00 0.00 5.28
48 49 5.939296 TCCGGAAGTTATCATTACCGTTTTT 59.061 36.000 0.00 0.00 38.92 1.94
49 50 5.352293 GTCCGGAAGTTATCATTACCGTTTT 59.648 40.000 5.23 0.00 38.92 2.43
50 51 4.872124 GTCCGGAAGTTATCATTACCGTTT 59.128 41.667 5.23 0.00 38.92 3.60
51 52 4.436332 GTCCGGAAGTTATCATTACCGTT 58.564 43.478 5.23 0.00 38.92 4.44
52 53 3.489738 CGTCCGGAAGTTATCATTACCGT 60.490 47.826 5.23 0.00 38.92 4.83
53 54 3.047796 CGTCCGGAAGTTATCATTACCG 58.952 50.000 5.23 0.00 40.03 4.02
54 55 4.050852 ACGTCCGGAAGTTATCATTACC 57.949 45.455 17.92 0.00 0.00 2.85
55 56 4.205792 CGAACGTCCGGAAGTTATCATTAC 59.794 45.833 31.50 17.90 33.35 1.89
56 57 4.353737 CGAACGTCCGGAAGTTATCATTA 58.646 43.478 31.50 0.00 33.35 1.90
57 58 3.184541 CGAACGTCCGGAAGTTATCATT 58.815 45.455 31.50 12.49 33.35 2.57
58 59 2.805845 CGAACGTCCGGAAGTTATCAT 58.194 47.619 31.50 13.23 33.35 2.45
59 60 2.267188 CGAACGTCCGGAAGTTATCA 57.733 50.000 31.50 0.00 33.35 2.15
69 70 1.074872 GCTTAACTCCCGAACGTCCG 61.075 60.000 0.00 0.00 0.00 4.79
70 71 0.037975 TGCTTAACTCCCGAACGTCC 60.038 55.000 0.00 0.00 0.00 4.79
71 72 1.659098 CATGCTTAACTCCCGAACGTC 59.341 52.381 0.00 0.00 0.00 4.34
72 73 1.674817 CCATGCTTAACTCCCGAACGT 60.675 52.381 0.00 0.00 0.00 3.99
73 74 1.006832 CCATGCTTAACTCCCGAACG 58.993 55.000 0.00 0.00 0.00 3.95
74 75 0.733150 GCCATGCTTAACTCCCGAAC 59.267 55.000 0.00 0.00 0.00 3.95
75 76 0.326595 TGCCATGCTTAACTCCCGAA 59.673 50.000 0.00 0.00 0.00 4.30
76 77 0.326595 TTGCCATGCTTAACTCCCGA 59.673 50.000 0.00 0.00 0.00 5.14
77 78 0.451783 GTTGCCATGCTTAACTCCCG 59.548 55.000 0.00 0.00 0.00 5.14
78 79 0.817654 GGTTGCCATGCTTAACTCCC 59.182 55.000 0.00 0.00 0.00 4.30
79 80 1.474077 CTGGTTGCCATGCTTAACTCC 59.526 52.381 0.00 0.00 30.82 3.85
80 81 2.436417 TCTGGTTGCCATGCTTAACTC 58.564 47.619 0.00 0.00 30.82 3.01
81 82 2.558359 GTTCTGGTTGCCATGCTTAACT 59.442 45.455 0.00 0.00 30.82 2.24
82 83 2.295909 TGTTCTGGTTGCCATGCTTAAC 59.704 45.455 0.00 0.00 30.82 2.01
83 84 2.557924 CTGTTCTGGTTGCCATGCTTAA 59.442 45.455 0.00 0.00 30.82 1.85
84 85 2.161855 CTGTTCTGGTTGCCATGCTTA 58.838 47.619 0.00 0.00 30.82 3.09
85 86 0.963962 CTGTTCTGGTTGCCATGCTT 59.036 50.000 0.00 0.00 30.82 3.91
86 87 0.896940 CCTGTTCTGGTTGCCATGCT 60.897 55.000 0.00 0.00 30.82 3.79
87 88 1.181098 ACCTGTTCTGGTTGCCATGC 61.181 55.000 0.00 0.00 36.89 4.06
88 89 3.040965 ACCTGTTCTGGTTGCCATG 57.959 52.632 0.00 0.00 36.89 3.66
95 96 2.375174 TGCCATCTAAACCTGTTCTGGT 59.625 45.455 0.00 0.00 43.11 4.00
96 97 3.071874 TGCCATCTAAACCTGTTCTGG 57.928 47.619 0.00 0.00 0.00 3.86
97 98 4.074970 ACTTGCCATCTAAACCTGTTCTG 58.925 43.478 0.00 0.00 0.00 3.02
98 99 4.373156 ACTTGCCATCTAAACCTGTTCT 57.627 40.909 0.00 0.00 0.00 3.01
99 100 5.453567 AAACTTGCCATCTAAACCTGTTC 57.546 39.130 0.00 0.00 0.00 3.18
100 101 6.068670 ACTAAACTTGCCATCTAAACCTGTT 58.931 36.000 0.00 0.00 0.00 3.16
101 102 5.631119 ACTAAACTTGCCATCTAAACCTGT 58.369 37.500 0.00 0.00 0.00 4.00
102 103 6.575162 AACTAAACTTGCCATCTAAACCTG 57.425 37.500 0.00 0.00 0.00 4.00
103 104 6.549736 ACAAACTAAACTTGCCATCTAAACCT 59.450 34.615 0.00 0.00 0.00 3.50
104 105 6.640907 CACAAACTAAACTTGCCATCTAAACC 59.359 38.462 0.00 0.00 0.00 3.27
105 106 7.167468 CACACAAACTAAACTTGCCATCTAAAC 59.833 37.037 0.00 0.00 0.00 2.01
106 107 7.067615 TCACACAAACTAAACTTGCCATCTAAA 59.932 33.333 0.00 0.00 0.00 1.85
107 108 6.544197 TCACACAAACTAAACTTGCCATCTAA 59.456 34.615 0.00 0.00 0.00 2.10
108 109 6.058833 TCACACAAACTAAACTTGCCATCTA 58.941 36.000 0.00 0.00 0.00 1.98
109 110 4.887071 TCACACAAACTAAACTTGCCATCT 59.113 37.500 0.00 0.00 0.00 2.90
110 111 5.008613 TCTCACACAAACTAAACTTGCCATC 59.991 40.000 0.00 0.00 0.00 3.51
111 112 4.887071 TCTCACACAAACTAAACTTGCCAT 59.113 37.500 0.00 0.00 0.00 4.40
112 113 4.265893 TCTCACACAAACTAAACTTGCCA 58.734 39.130 0.00 0.00 0.00 4.92
113 114 4.893424 TCTCACACAAACTAAACTTGCC 57.107 40.909 0.00 0.00 0.00 4.52
114 115 7.078228 CCTAATCTCACACAAACTAAACTTGC 58.922 38.462 0.00 0.00 0.00 4.01
115 116 7.444183 TCCCTAATCTCACACAAACTAAACTTG 59.556 37.037 0.00 0.00 0.00 3.16
116 117 7.514721 TCCCTAATCTCACACAAACTAAACTT 58.485 34.615 0.00 0.00 0.00 2.66
117 118 7.074653 TCCCTAATCTCACACAAACTAAACT 57.925 36.000 0.00 0.00 0.00 2.66
118 119 7.739498 TTCCCTAATCTCACACAAACTAAAC 57.261 36.000 0.00 0.00 0.00 2.01
119 120 7.776030 TGTTTCCCTAATCTCACACAAACTAAA 59.224 33.333 0.00 0.00 0.00 1.85
120 121 7.284074 TGTTTCCCTAATCTCACACAAACTAA 58.716 34.615 0.00 0.00 0.00 2.24
121 122 6.833041 TGTTTCCCTAATCTCACACAAACTA 58.167 36.000 0.00 0.00 0.00 2.24
122 123 5.690865 TGTTTCCCTAATCTCACACAAACT 58.309 37.500 0.00 0.00 0.00 2.66
123 124 6.381801 CATGTTTCCCTAATCTCACACAAAC 58.618 40.000 0.00 0.00 0.00 2.93
124 125 5.476599 CCATGTTTCCCTAATCTCACACAAA 59.523 40.000 0.00 0.00 0.00 2.83
125 126 5.009631 CCATGTTTCCCTAATCTCACACAA 58.990 41.667 0.00 0.00 0.00 3.33
126 127 4.588899 CCATGTTTCCCTAATCTCACACA 58.411 43.478 0.00 0.00 0.00 3.72
127 128 3.378427 GCCATGTTTCCCTAATCTCACAC 59.622 47.826 0.00 0.00 0.00 3.82
128 129 3.010027 TGCCATGTTTCCCTAATCTCACA 59.990 43.478 0.00 0.00 0.00 3.58
129 130 3.620488 TGCCATGTTTCCCTAATCTCAC 58.380 45.455 0.00 0.00 0.00 3.51
130 131 4.314522 TTGCCATGTTTCCCTAATCTCA 57.685 40.909 0.00 0.00 0.00 3.27
131 132 5.859205 AATTGCCATGTTTCCCTAATCTC 57.141 39.130 0.00 0.00 0.00 2.75
132 133 6.441604 AGAAAATTGCCATGTTTCCCTAATCT 59.558 34.615 2.96 0.00 32.74 2.40
133 134 6.536224 CAGAAAATTGCCATGTTTCCCTAATC 59.464 38.462 2.96 0.00 32.74 1.75
134 135 6.213195 TCAGAAAATTGCCATGTTTCCCTAAT 59.787 34.615 2.96 0.00 32.74 1.73
135 136 5.541868 TCAGAAAATTGCCATGTTTCCCTAA 59.458 36.000 2.96 0.00 32.74 2.69
136 137 5.047377 GTCAGAAAATTGCCATGTTTCCCTA 60.047 40.000 2.96 0.00 32.74 3.53
137 138 3.903090 TCAGAAAATTGCCATGTTTCCCT 59.097 39.130 2.96 0.00 32.74 4.20
138 139 3.996363 GTCAGAAAATTGCCATGTTTCCC 59.004 43.478 2.96 0.00 32.74 3.97
139 140 4.630111 TGTCAGAAAATTGCCATGTTTCC 58.370 39.130 2.96 0.00 32.74 3.13
140 141 6.601741 TTTGTCAGAAAATTGCCATGTTTC 57.398 33.333 0.00 0.00 0.00 2.78
141 142 6.998968 TTTTGTCAGAAAATTGCCATGTTT 57.001 29.167 0.00 0.00 0.00 2.83
142 143 6.998968 TTTTTGTCAGAAAATTGCCATGTT 57.001 29.167 0.00 0.00 0.00 2.71
163 164 4.325204 GCAACTTCGTCCTTTTTCGTTTTT 59.675 37.500 0.00 0.00 0.00 1.94
164 165 3.855379 GCAACTTCGTCCTTTTTCGTTTT 59.145 39.130 0.00 0.00 0.00 2.43
165 166 3.431856 GCAACTTCGTCCTTTTTCGTTT 58.568 40.909 0.00 0.00 0.00 3.60
166 167 2.223409 GGCAACTTCGTCCTTTTTCGTT 60.223 45.455 0.00 0.00 0.00 3.85
167 168 1.332686 GGCAACTTCGTCCTTTTTCGT 59.667 47.619 0.00 0.00 0.00 3.85
168 169 1.332375 TGGCAACTTCGTCCTTTTTCG 59.668 47.619 0.00 0.00 37.61 3.46
169 170 3.565516 GATGGCAACTTCGTCCTTTTTC 58.434 45.455 0.00 0.00 37.61 2.29
170 171 2.296190 GGATGGCAACTTCGTCCTTTTT 59.704 45.455 0.00 0.00 41.51 1.94
171 172 1.886542 GGATGGCAACTTCGTCCTTTT 59.113 47.619 0.00 0.00 41.51 2.27
172 173 1.534729 GGATGGCAACTTCGTCCTTT 58.465 50.000 0.00 0.00 41.51 3.11
173 174 0.322546 GGGATGGCAACTTCGTCCTT 60.323 55.000 0.00 0.00 41.51 3.36
174 175 1.299976 GGGATGGCAACTTCGTCCT 59.700 57.895 0.00 0.00 41.51 3.85
175 176 0.394352 ATGGGATGGCAACTTCGTCC 60.394 55.000 0.00 0.00 41.51 4.79
176 177 2.325583 TATGGGATGGCAACTTCGTC 57.674 50.000 0.00 0.00 41.51 4.20
177 178 2.172505 TCATATGGGATGGCAACTTCGT 59.827 45.455 2.13 0.00 41.51 3.85
178 179 2.849942 TCATATGGGATGGCAACTTCG 58.150 47.619 2.13 0.00 41.51 3.79
179 180 4.210331 AGTTCATATGGGATGGCAACTTC 58.790 43.478 2.13 0.00 39.93 3.01
180 181 4.255510 AGTTCATATGGGATGGCAACTT 57.744 40.909 2.13 0.00 37.61 2.66
181 182 3.959495 AGTTCATATGGGATGGCAACT 57.041 42.857 2.13 0.51 37.61 3.16
182 183 5.594317 ACTTTAGTTCATATGGGATGGCAAC 59.406 40.000 2.13 0.00 0.00 4.17
183 184 5.765510 ACTTTAGTTCATATGGGATGGCAA 58.234 37.500 2.13 0.00 0.00 4.52
184 185 5.387113 ACTTTAGTTCATATGGGATGGCA 57.613 39.130 2.13 0.00 0.00 4.92
185 186 6.239036 GGAAACTTTAGTTCATATGGGATGGC 60.239 42.308 2.13 0.00 37.25 4.40
186 187 6.833416 TGGAAACTTTAGTTCATATGGGATGG 59.167 38.462 2.13 0.00 37.25 3.51
187 188 7.880160 TGGAAACTTTAGTTCATATGGGATG 57.120 36.000 2.13 0.00 37.25 3.51
188 189 8.061304 ACATGGAAACTTTAGTTCATATGGGAT 58.939 33.333 2.13 0.00 37.25 3.85
189 190 7.410174 ACATGGAAACTTTAGTTCATATGGGA 58.590 34.615 2.13 0.00 37.25 4.37
190 191 7.645058 ACATGGAAACTTTAGTTCATATGGG 57.355 36.000 2.13 0.00 37.25 4.00
222 223 3.999229 ATTGAGCATTTCGTCTCGAAC 57.001 42.857 4.08 0.00 45.64 3.95
223 224 4.745125 GGATATTGAGCATTTCGTCTCGAA 59.255 41.667 0.40 0.40 44.28 3.71
224 225 4.299155 GGATATTGAGCATTTCGTCTCGA 58.701 43.478 0.00 0.00 32.20 4.04
225 226 3.120286 CGGATATTGAGCATTTCGTCTCG 59.880 47.826 0.00 0.00 32.20 4.04
226 227 4.299155 TCGGATATTGAGCATTTCGTCTC 58.701 43.478 0.00 0.00 0.00 3.36
227 228 4.322080 TCGGATATTGAGCATTTCGTCT 57.678 40.909 0.00 0.00 0.00 4.18
228 229 4.508124 AGTTCGGATATTGAGCATTTCGTC 59.492 41.667 0.00 0.00 0.00 4.20
229 230 4.271049 CAGTTCGGATATTGAGCATTTCGT 59.729 41.667 0.00 0.00 0.00 3.85
230 231 4.271049 ACAGTTCGGATATTGAGCATTTCG 59.729 41.667 0.00 0.00 0.00 3.46
231 232 5.741388 ACAGTTCGGATATTGAGCATTTC 57.259 39.130 0.00 0.00 0.00 2.17
232 233 6.124088 GAACAGTTCGGATATTGAGCATTT 57.876 37.500 0.00 0.00 0.00 2.32
233 234 5.741388 GAACAGTTCGGATATTGAGCATT 57.259 39.130 0.00 0.00 0.00 3.56
247 248 3.934068 TCCAATAACTCCCGAACAGTTC 58.066 45.455 2.85 2.85 35.63 3.01
248 249 4.569719 ATCCAATAACTCCCGAACAGTT 57.430 40.909 0.00 0.00 37.80 3.16
249 250 4.514401 GAATCCAATAACTCCCGAACAGT 58.486 43.478 0.00 0.00 0.00 3.55
250 251 3.877508 GGAATCCAATAACTCCCGAACAG 59.122 47.826 0.00 0.00 0.00 3.16
251 252 3.521937 AGGAATCCAATAACTCCCGAACA 59.478 43.478 0.61 0.00 0.00 3.18
252 253 4.152284 AGGAATCCAATAACTCCCGAAC 57.848 45.455 0.61 0.00 0.00 3.95
253 254 5.961398 TTAGGAATCCAATAACTCCCGAA 57.039 39.130 0.61 0.00 0.00 4.30
254 255 5.961398 TTTAGGAATCCAATAACTCCCGA 57.039 39.130 0.61 0.00 0.00 5.14
276 277 2.340328 GCCTCCCCGCGTGATTTTT 61.340 57.895 4.92 0.00 0.00 1.94
277 278 2.750237 GCCTCCCCGCGTGATTTT 60.750 61.111 4.92 0.00 0.00 1.82
278 279 3.717294 AGCCTCCCCGCGTGATTT 61.717 61.111 4.92 0.00 0.00 2.17
279 280 4.473520 CAGCCTCCCCGCGTGATT 62.474 66.667 4.92 0.00 0.00 2.57
282 283 4.697756 TTTCAGCCTCCCCGCGTG 62.698 66.667 4.92 0.00 0.00 5.34
283 284 4.699522 GTTTCAGCCTCCCCGCGT 62.700 66.667 4.92 0.00 0.00 6.01
284 285 4.697756 TGTTTCAGCCTCCCCGCG 62.698 66.667 0.00 0.00 0.00 6.46
285 286 2.747855 CTGTTTCAGCCTCCCCGC 60.748 66.667 0.00 0.00 0.00 6.13
286 287 1.376037 GTCTGTTTCAGCCTCCCCG 60.376 63.158 0.00 0.00 0.00 5.73
287 288 1.002011 GGTCTGTTTCAGCCTCCCC 60.002 63.158 0.00 0.00 0.00 4.81
288 289 0.322008 CAGGTCTGTTTCAGCCTCCC 60.322 60.000 8.81 0.00 36.43 4.30
289 290 0.687354 TCAGGTCTGTTTCAGCCTCC 59.313 55.000 8.81 4.51 36.43 4.30
290 291 1.609320 GGTCAGGTCTGTTTCAGCCTC 60.609 57.143 8.81 2.30 36.43 4.70
291 292 0.398318 GGTCAGGTCTGTTTCAGCCT 59.602 55.000 0.00 6.82 38.07 4.58
292 293 0.951040 CGGTCAGGTCTGTTTCAGCC 60.951 60.000 0.00 0.00 0.00 4.85
293 294 0.249911 ACGGTCAGGTCTGTTTCAGC 60.250 55.000 0.00 0.00 0.00 4.26
305 306 4.481930 TTTTTCAACATGCTACGGTCAG 57.518 40.909 0.00 0.00 0.00 3.51
311 312 5.627172 TGCGTAGATTTTTCAACATGCTAC 58.373 37.500 0.00 0.00 0.00 3.58
312 313 5.871465 TGCGTAGATTTTTCAACATGCTA 57.129 34.783 0.00 0.00 0.00 3.49
314 315 4.679197 TGTTGCGTAGATTTTTCAACATGC 59.321 37.500 0.00 0.00 41.12 4.06
348 350 3.064207 GCGTGTCAGGTCAGTCAATTTA 58.936 45.455 0.00 0.00 0.00 1.40
373 376 0.451783 GGGCCACTTAGCGTCAAATG 59.548 55.000 4.39 0.00 0.00 2.32
391 394 2.438434 GCCAGACACCCCGATTGG 60.438 66.667 0.00 0.00 0.00 3.16
393 396 1.303317 GTTGCCAGACACCCCGATT 60.303 57.895 0.00 0.00 0.00 3.34
442 447 3.004106 CAGCTTGAGCAGTAGCAGTTTTT 59.996 43.478 5.70 0.00 45.49 1.94
445 450 1.071385 ACAGCTTGAGCAGTAGCAGTT 59.929 47.619 5.70 0.00 45.49 3.16
447 452 1.077123 CACAGCTTGAGCAGTAGCAG 58.923 55.000 5.70 1.72 45.49 4.24
448 453 0.394192 ACACAGCTTGAGCAGTAGCA 59.606 50.000 5.70 0.00 45.49 3.49
449 454 0.795085 CACACAGCTTGAGCAGTAGC 59.205 55.000 5.70 0.00 45.16 3.58
450 455 2.335752 CTCACACAGCTTGAGCAGTAG 58.664 52.381 5.70 0.54 45.16 2.57
451 456 2.445565 CTCACACAGCTTGAGCAGTA 57.554 50.000 5.70 0.00 45.16 2.74
504 523 2.981140 GTTCGTGACACAGAGCTCTAAC 59.019 50.000 17.75 10.82 0.00 2.34
508 527 1.692296 GAGTTCGTGACACAGAGCTC 58.308 55.000 19.70 19.70 37.51 4.09
544 569 0.249238 CTCTTTCCTCCGGAGCATCG 60.249 60.000 26.87 12.57 34.37 3.84
546 571 0.827368 GTCTCTTTCCTCCGGAGCAT 59.173 55.000 26.87 0.00 31.21 3.79
566 591 2.033141 TGCACTCTGCTTCCCTGC 59.967 61.111 0.00 0.00 45.31 4.85
567 592 0.035881 TTCTGCACTCTGCTTCCCTG 59.964 55.000 0.00 0.00 45.31 4.45
578 603 0.392729 GCATCTCAGCCTTCTGCACT 60.393 55.000 0.00 0.00 44.83 4.40
593 618 0.102481 TACTTTCCCTCGCGAGCATC 59.898 55.000 30.49 0.00 0.00 3.91
653 678 1.827399 TTCGTCTCAACTGCTCCCCC 61.827 60.000 0.00 0.00 0.00 5.40
679 704 3.576078 ACTGACCCAAATTGTCTCACA 57.424 42.857 0.00 0.00 33.83 3.58
689 714 1.480137 CAAGTTGGCAACTGACCCAAA 59.520 47.619 31.75 0.00 42.32 3.28
698 723 1.045911 TTCCACCCCAAGTTGGCAAC 61.046 55.000 22.48 22.48 35.79 4.17
702 727 2.765699 CCAATATTCCACCCCAAGTTGG 59.234 50.000 15.52 15.52 37.25 3.77
742 769 0.798009 GTGCCCGCATTGTTGATTCG 60.798 55.000 0.00 0.00 0.00 3.34
743 770 0.798009 CGTGCCCGCATTGTTGATTC 60.798 55.000 0.00 0.00 0.00 2.52
775 802 0.602638 CACGTAGGCTTGACTTGGCA 60.603 55.000 0.00 0.00 0.00 4.92
790 817 1.304547 CTGGGAGAGGAGACCACGT 60.305 63.158 0.00 0.00 0.00 4.49
884 913 1.202521 TGATGGACCGACGATTGATGG 60.203 52.381 0.00 0.00 0.00 3.51
889 918 2.979814 TGATTGATGGACCGACGATT 57.020 45.000 0.00 0.00 0.00 3.34
899 928 4.633126 AGTTCAGTGAACGATGATTGATGG 59.367 41.667 26.17 0.00 45.96 3.51
935 964 7.333921 GCTCCGATACACAGTACTATATACACT 59.666 40.741 0.00 0.00 0.00 3.55
936 965 7.118825 TGCTCCGATACACAGTACTATATACAC 59.881 40.741 0.00 0.00 0.00 2.90
948 987 0.457443 TGCTCTGCTCCGATACACAG 59.543 55.000 0.00 0.00 0.00 3.66
952 995 0.175760 TGGTTGCTCTGCTCCGATAC 59.824 55.000 0.00 0.00 0.00 2.24
982 1025 2.364970 CCATTCTCGAGATGCTCCTCTT 59.635 50.000 17.44 0.00 0.00 2.85
984 1027 1.605202 GCCATTCTCGAGATGCTCCTC 60.605 57.143 17.44 0.00 0.00 3.71
1015 1061 0.177604 AGTAGGATCAGCAGCAGCAC 59.822 55.000 3.17 0.00 45.49 4.40
1030 1076 1.160137 GCCACCAGCAAGTGAAGTAG 58.840 55.000 7.64 0.00 42.97 2.57
1032 1078 1.893808 CGCCACCAGCAAGTGAAGT 60.894 57.895 7.64 0.00 44.04 3.01
1035 1081 1.153066 TTTCGCCACCAGCAAGTGA 60.153 52.632 7.64 0.00 44.04 3.41
1116 1164 1.832998 GGGTAGGGAACGGTGATGTTA 59.167 52.381 0.00 0.00 30.75 2.41
1377 1452 0.914902 AGAGGAAGGGGGTGCCTAAC 60.915 60.000 0.00 0.00 30.70 2.34
1391 1466 1.203013 TCTTGGTGGACGAGAAGAGGA 60.203 52.381 0.00 0.00 36.65 3.71
1458 1533 2.747460 ACGTAGTAGCCGTCGCCA 60.747 61.111 0.00 0.00 41.94 5.69
1578 1653 0.248012 TGCGAATGGTAGGCTCGAAA 59.752 50.000 0.00 0.00 34.52 3.46
1695 1797 2.257371 CGGTTGAGGAAGACGCGA 59.743 61.111 15.93 0.00 0.00 5.87
1863 1968 2.357836 CCCTGGGAGCAGTTGCAT 59.642 61.111 7.01 0.00 45.16 3.96
1954 2460 7.731269 ACTACTAAGTAACTGAACACAGTCGTG 60.731 40.741 3.38 0.00 43.00 4.35
1955 2461 5.511234 ACTAAGTAACTGAACACAGTCGT 57.489 39.130 3.38 0.00 43.00 4.34
1956 2462 6.666417 ACTACTAAGTAACTGAACACAGTCG 58.334 40.000 3.38 0.00 43.00 4.18
1957 2463 8.997323 TCTACTACTAAGTAACTGAACACAGTC 58.003 37.037 3.38 0.00 39.14 3.51
1958 2464 8.915057 TCTACTACTAAGTAACTGAACACAGT 57.085 34.615 0.00 0.00 40.38 3.55
1989 2563 8.819974 GTTTCAACACATTTGATCAGACAAATT 58.180 29.630 0.00 0.00 44.63 1.82
2000 2580 4.270566 GCAATGCAGTTTCAACACATTTGA 59.729 37.500 0.00 0.00 36.46 2.69
2015 2596 7.130917 GTCTATATCTTCAGTTTGCAATGCAG 58.869 38.462 8.31 0.00 40.61 4.41
2019 2600 7.223582 CACTCGTCTATATCTTCAGTTTGCAAT 59.776 37.037 0.00 0.00 0.00 3.56
2047 2628 9.170584 GTAGCAAGAGTAATTTTCTTTGTGTTC 57.829 33.333 3.01 0.00 32.75 3.18
2051 2632 6.708949 TCCGTAGCAAGAGTAATTTTCTTTGT 59.291 34.615 3.01 0.00 32.75 2.83
2052 2633 7.095187 ACTCCGTAGCAAGAGTAATTTTCTTTG 60.095 37.037 3.01 0.00 32.75 2.77
2058 2639 5.411781 CAGACTCCGTAGCAAGAGTAATTT 58.588 41.667 0.00 0.00 0.00 1.82
2059 2640 4.678309 GCAGACTCCGTAGCAAGAGTAATT 60.678 45.833 0.00 0.00 0.00 1.40
2065 2646 0.243907 GTGCAGACTCCGTAGCAAGA 59.756 55.000 0.00 0.00 38.91 3.02
2067 2648 0.391228 TTGTGCAGACTCCGTAGCAA 59.609 50.000 0.00 0.00 38.91 3.91
2142 2731 2.345244 CGGCAGCCACTCTTGACT 59.655 61.111 13.30 0.00 0.00 3.41
2143 2732 2.743928 CCGGCAGCCACTCTTGAC 60.744 66.667 13.30 0.00 0.00 3.18
2144 2733 4.704833 GCCGGCAGCCACTCTTGA 62.705 66.667 24.80 0.00 34.35 3.02
2175 2764 6.916440 TGTAACGACTTTCAGAGCTAATGTA 58.084 36.000 0.00 0.00 0.00 2.29
2178 2767 5.047235 ACCTGTAACGACTTTCAGAGCTAAT 60.047 40.000 0.00 0.00 0.00 1.73
2219 2816 4.036734 TCAGTTTGCAAAGCTAAGGTGAAG 59.963 41.667 13.26 0.00 34.08 3.02
2245 2907 9.345517 GCGTGAAATATGTTGCATTATTGATAT 57.654 29.630 0.00 0.00 0.00 1.63
2246 2908 8.567104 AGCGTGAAATATGTTGCATTATTGATA 58.433 29.630 0.00 0.00 0.00 2.15
2247 2909 7.428020 AGCGTGAAATATGTTGCATTATTGAT 58.572 30.769 0.00 0.00 0.00 2.57
2248 2910 6.794374 AGCGTGAAATATGTTGCATTATTGA 58.206 32.000 0.00 0.00 0.00 2.57
2249 2911 7.009448 ACAAGCGTGAAATATGTTGCATTATTG 59.991 33.333 6.65 0.00 0.00 1.90
2250 2912 7.035004 ACAAGCGTGAAATATGTTGCATTATT 58.965 30.769 6.65 0.00 0.00 1.40
2251 2913 6.563422 ACAAGCGTGAAATATGTTGCATTAT 58.437 32.000 6.65 0.00 0.00 1.28
2252 2914 5.948588 ACAAGCGTGAAATATGTTGCATTA 58.051 33.333 6.65 0.00 0.00 1.90
2253 2915 4.808558 ACAAGCGTGAAATATGTTGCATT 58.191 34.783 6.65 0.00 0.00 3.56
2254 2916 4.439305 ACAAGCGTGAAATATGTTGCAT 57.561 36.364 6.65 0.00 0.00 3.96
2255 2917 3.913548 ACAAGCGTGAAATATGTTGCA 57.086 38.095 6.65 0.00 0.00 4.08
2256 2918 4.666176 CGATACAAGCGTGAAATATGTTGC 59.334 41.667 6.65 0.00 0.00 4.17
2257 2919 5.795766 ACGATACAAGCGTGAAATATGTTG 58.204 37.500 6.65 0.00 40.94 3.33
2258 2920 6.247903 CAACGATACAAGCGTGAAATATGTT 58.752 36.000 6.65 5.58 41.75 2.71
2270 2932 1.666189 GGAAGAGCCAACGATACAAGC 59.334 52.381 0.00 0.00 36.34 4.01
2276 2938 0.036732 TTGCAGGAAGAGCCAACGAT 59.963 50.000 0.00 0.00 40.02 3.73
2278 2940 0.883833 AATTGCAGGAAGAGCCAACG 59.116 50.000 0.00 0.00 40.02 4.10
2284 2946 4.274459 CCCGAGAATAAATTGCAGGAAGAG 59.726 45.833 0.00 0.00 0.00 2.85
2287 2949 3.287222 CCCCGAGAATAAATTGCAGGAA 58.713 45.455 0.00 0.00 0.00 3.36
2302 2964 1.272807 TGTAGAAAAGGACCCCCGAG 58.727 55.000 0.00 0.00 37.58 4.63
2308 2970 5.535030 AGAACACCATTTGTAGAAAAGGACC 59.465 40.000 13.02 0.55 37.51 4.46
2309 2971 6.635030 AGAACACCATTTGTAGAAAAGGAC 57.365 37.500 13.02 2.84 37.51 3.85
2317 2979 4.651778 TCCAGGAAGAACACCATTTGTAG 58.348 43.478 0.00 0.00 37.51 2.74
2326 4243 6.043854 AGTTTAGATCTCCAGGAAGAACAC 57.956 41.667 0.00 0.00 0.00 3.32
2340 4257 8.317679 ACCTATGCTCCATCATTAGTTTAGATC 58.682 37.037 0.00 0.00 0.00 2.75
2360 4277 1.226974 CCCGACGCTGACACCTATG 60.227 63.158 0.00 0.00 0.00 2.23
2366 4301 3.509137 GAACACCCCGACGCTGACA 62.509 63.158 0.00 0.00 0.00 3.58
2507 4453 3.390521 CCTCCTGCGGTGCCACTA 61.391 66.667 0.00 0.00 0.00 2.74
2537 4483 7.772757 AGCTCTTCTTCGGAGAATATTTTGAAT 59.227 33.333 6.61 0.00 45.90 2.57
2543 4489 4.580995 TCGAGCTCTTCTTCGGAGAATATT 59.419 41.667 12.85 0.00 45.90 1.28
3225 5173 0.392998 GCTGTCATGAACCCGGACAT 60.393 55.000 0.73 2.63 40.44 3.06
3275 5223 3.648067 TCTCATTTCTCACCTGGTTGTCT 59.352 43.478 0.00 0.00 0.00 3.41
3305 5253 3.760684 GTGTGATTTCTTCCAATGCCTCT 59.239 43.478 0.00 0.00 0.00 3.69
3646 5604 7.612633 GGGAGGTACATCCAAAATAGTTTACAA 59.387 37.037 26.67 0.00 41.52 2.41
3653 5611 4.682778 TCGGGAGGTACATCCAAAATAG 57.317 45.455 26.67 10.96 41.52 1.73
3683 5641 2.172930 ACAGGACTACAGGAGCGAGATA 59.827 50.000 0.00 0.00 0.00 1.98
3697 5655 1.069765 CCACAAGCGACACAGGACT 59.930 57.895 0.00 0.00 0.00 3.85
3698 5656 1.961277 CCCACAAGCGACACAGGAC 60.961 63.158 0.00 0.00 0.00 3.85
3699 5657 2.425592 CCCACAAGCGACACAGGA 59.574 61.111 0.00 0.00 0.00 3.86
3700 5658 3.357079 GCCCACAAGCGACACAGG 61.357 66.667 0.00 0.00 0.00 4.00
3709 5667 2.233605 TATCCGGTGTCGCCCACAAG 62.234 60.000 0.00 1.58 46.44 3.16
3710 5668 2.284276 TATCCGGTGTCGCCCACAA 61.284 57.895 0.00 0.00 46.44 3.33
3711 5669 2.680707 TATCCGGTGTCGCCCACA 60.681 61.111 0.00 0.00 46.44 4.17
3785 5745 8.792830 AAGATAGCAACTTCACAAATAAGCTA 57.207 30.769 0.00 0.00 37.68 3.32
3805 5765 2.068519 CAGTTGCACGCACTGAAGATA 58.931 47.619 10.90 0.00 33.65 1.98
3828 5788 9.959749 TTTCAAGTTCAGTATATTCCACAAAAC 57.040 29.630 0.00 0.00 0.00 2.43
3867 5827 7.921786 AAACATGTACTGAAATAAGCAGCTA 57.078 32.000 0.00 0.00 36.86 3.32
3885 5845 8.365210 GTGAAATACGCAAACTCATTAAACATG 58.635 33.333 0.00 0.00 0.00 3.21
3886 5846 8.296713 AGTGAAATACGCAAACTCATTAAACAT 58.703 29.630 0.00 0.00 0.00 2.71
3892 5852 5.940192 TGAGTGAAATACGCAAACTCATT 57.060 34.783 0.00 0.00 41.63 2.57
3903 5863 7.396540 ACTGAAATGGGAATGAGTGAAATAC 57.603 36.000 0.00 0.00 0.00 1.89
3934 5894 8.571461 TCATTTCAAGAAGCTGAGATTTATGT 57.429 30.769 0.00 0.00 0.00 2.29
3947 5907 9.971922 AAACCTAATTTCACTCATTTCAAGAAG 57.028 29.630 0.00 0.00 0.00 2.85
3957 5917 9.748708 CTCATTTCAAAAACCTAATTTCACTCA 57.251 29.630 0.00 0.00 0.00 3.41
3958 5918 9.965824 TCTCATTTCAAAAACCTAATTTCACTC 57.034 29.630 0.00 0.00 0.00 3.51
3996 5956 9.814899 TCAAAAGCTAATTTCACTCATTTCAAA 57.185 25.926 0.00 0.00 0.00 2.69
3997 5957 9.814899 TTCAAAAGCTAATTTCACTCATTTCAA 57.185 25.926 0.00 0.00 0.00 2.69
3998 5958 9.814899 TTTCAAAAGCTAATTTCACTCATTTCA 57.185 25.926 0.00 0.00 0.00 2.69
4179 6341 9.226606 ACCGATTTCACTCATTTCATAAAACTA 57.773 29.630 0.00 0.00 0.00 2.24
4180 6342 8.110860 ACCGATTTCACTCATTTCATAAAACT 57.889 30.769 0.00 0.00 0.00 2.66
4181 6343 8.237267 AGACCGATTTCACTCATTTCATAAAAC 58.763 33.333 0.00 0.00 0.00 2.43
4183 6345 7.921786 AGACCGATTTCACTCATTTCATAAA 57.078 32.000 0.00 0.00 0.00 1.40
4184 6346 7.921786 AAGACCGATTTCACTCATTTCATAA 57.078 32.000 0.00 0.00 0.00 1.90
4185 6347 7.606073 TCAAAGACCGATTTCACTCATTTCATA 59.394 33.333 0.00 0.00 0.00 2.15
4225 6387 6.969993 TGCTGGTTACTATTTTGGAAAACT 57.030 33.333 0.00 0.00 0.00 2.66
4226 6388 7.381408 GTCTTGCTGGTTACTATTTTGGAAAAC 59.619 37.037 0.00 0.00 0.00 2.43
4228 6390 6.547880 TGTCTTGCTGGTTACTATTTTGGAAA 59.452 34.615 0.00 0.00 0.00 3.13
4238 6400 1.421646 AGGCTTGTCTTGCTGGTTACT 59.578 47.619 0.00 0.00 0.00 2.24
4242 6404 1.900498 GCAGGCTTGTCTTGCTGGT 60.900 57.895 0.00 0.00 0.00 4.00
4243 6405 2.633509 GGCAGGCTTGTCTTGCTGG 61.634 63.158 0.00 0.00 0.00 4.85
4245 6407 0.622665 ATAGGCAGGCTTGTCTTGCT 59.377 50.000 8.74 0.00 40.45 3.91
4246 6408 1.467920 AATAGGCAGGCTTGTCTTGC 58.532 50.000 8.74 0.00 40.45 4.01
4253 6417 1.408822 CGGGAGAAAATAGGCAGGCTT 60.409 52.381 0.00 0.00 0.00 4.35
4255 6419 0.819666 CCGGGAGAAAATAGGCAGGC 60.820 60.000 0.00 0.00 0.00 4.85
4267 6431 1.000843 CATGCATATCGAACCGGGAGA 59.999 52.381 6.32 1.65 0.00 3.71
4324 6671 0.179056 CATACGGGGCGATGGAGTTT 60.179 55.000 0.00 0.00 0.00 2.66
4382 6729 4.724399 TCTGCTCATCCCAACTGTAAAAA 58.276 39.130 0.00 0.00 0.00 1.94
4383 6730 4.326826 CTCTGCTCATCCCAACTGTAAAA 58.673 43.478 0.00 0.00 0.00 1.52
4384 6731 3.869912 GCTCTGCTCATCCCAACTGTAAA 60.870 47.826 0.00 0.00 0.00 2.01
4385 6732 2.355108 GCTCTGCTCATCCCAACTGTAA 60.355 50.000 0.00 0.00 0.00 2.41
4386 6733 1.208052 GCTCTGCTCATCCCAACTGTA 59.792 52.381 0.00 0.00 0.00 2.74
4387 6734 0.035630 GCTCTGCTCATCCCAACTGT 60.036 55.000 0.00 0.00 0.00 3.55
4388 6735 0.747283 GGCTCTGCTCATCCCAACTG 60.747 60.000 0.00 0.00 0.00 3.16
4389 6736 1.203441 TGGCTCTGCTCATCCCAACT 61.203 55.000 0.00 0.00 0.00 3.16
4390 6737 0.747283 CTGGCTCTGCTCATCCCAAC 60.747 60.000 0.00 0.00 0.00 3.77
4391 6738 1.605992 CTGGCTCTGCTCATCCCAA 59.394 57.895 0.00 0.00 0.00 4.12
4392 6739 3.040206 GCTGGCTCTGCTCATCCCA 62.040 63.158 0.00 0.00 0.00 4.37
4393 6740 2.203181 GCTGGCTCTGCTCATCCC 60.203 66.667 0.00 0.00 0.00 3.85
4394 6741 1.077930 TTGCTGGCTCTGCTCATCC 60.078 57.895 5.84 0.00 0.00 3.51
4395 6742 1.375098 GGTTGCTGGCTCTGCTCATC 61.375 60.000 5.84 0.00 0.00 2.92
4396 6743 1.378250 GGTTGCTGGCTCTGCTCAT 60.378 57.895 5.84 0.00 0.00 2.90
4397 6744 2.033141 GGTTGCTGGCTCTGCTCA 59.967 61.111 5.84 0.00 0.00 4.26
4398 6745 2.033141 TGGTTGCTGGCTCTGCTC 59.967 61.111 5.84 0.91 0.00 4.26
4399 6746 2.033757 CTGGTTGCTGGCTCTGCT 59.966 61.111 5.84 0.00 0.00 4.24
4400 6747 2.033141 TCTGGTTGCTGGCTCTGC 59.967 61.111 0.00 0.00 0.00 4.26
4407 6754 3.144506 ACATGTTCTTCTCTGGTTGCTG 58.855 45.455 0.00 0.00 0.00 4.41
4423 6770 3.149196 GTGGTCACCATTCTCAACATGT 58.851 45.455 0.00 0.00 35.28 3.21
4438 6785 0.246360 CAGCATCAGTACGGTGGTCA 59.754 55.000 0.00 0.00 0.00 4.02
4452 6799 3.052082 GTGCAGCACGACCAGCAT 61.052 61.111 10.47 0.00 39.43 3.79
4473 6823 2.184322 CGCTGCTACCACGACCAT 59.816 61.111 0.00 0.00 0.00 3.55
4478 6828 1.515088 CTGAGTCGCTGCTACCACG 60.515 63.158 0.18 0.00 0.00 4.94
4483 6833 4.498520 GCCGCTGAGTCGCTGCTA 62.499 66.667 13.18 0.00 39.10 3.49
4486 6836 4.731612 ACTGCCGCTGAGTCGCTG 62.732 66.667 4.02 0.51 0.00 5.18
4487 6837 4.427661 GACTGCCGCTGAGTCGCT 62.428 66.667 4.02 0.00 31.01 4.93
4490 6840 2.505118 GACGACTGCCGCTGAGTC 60.505 66.667 4.02 9.03 43.32 3.36
4491 6841 4.406173 CGACGACTGCCGCTGAGT 62.406 66.667 4.02 3.84 43.32 3.41
4533 6883 3.276846 GACGTTGCCGCACCTGTT 61.277 61.111 0.00 0.00 37.70 3.16
4548 6898 1.190178 AAGTGGTAGGGGACGGTGAC 61.190 60.000 0.00 0.00 0.00 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.