Multiple sequence alignment - TraesCS6B01G411900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G411900 chr6B 100.000 7837 0 0 1 7837 685352217 685344381 0.000000e+00 14473
1 TraesCS6B01G411900 chr6D 92.724 4247 215 53 1 4176 451184885 451180662 0.000000e+00 6045
2 TraesCS6B01G411900 chr6D 85.742 1571 139 39 4210 5724 451180565 451179024 0.000000e+00 1581
3 TraesCS6B01G411900 chr6D 90.352 995 80 9 5798 6789 451178989 451178008 0.000000e+00 1291
4 TraesCS6B01G411900 chr6D 94.142 478 22 4 6957 7432 451177802 451177329 0.000000e+00 723
5 TraesCS6B01G411900 chr6D 90.083 121 12 0 7717 7837 451177084 451176964 2.930000e-34 158
6 TraesCS6B01G411900 chr6A 90.308 3890 205 56 834 4612 596912863 596909035 0.000000e+00 4937
7 TraesCS6B01G411900 chr6A 93.918 1529 73 9 5804 7321 596906240 596904721 0.000000e+00 2290
8 TraesCS6B01G411900 chr6A 86.253 1433 113 40 4210 5597 596909432 596908039 0.000000e+00 1478
9 TraesCS6B01G411900 chr6A 92.308 117 9 0 5669 5785 596906409 596906293 4.860000e-37 167
10 TraesCS6B01G411900 chr6A 93.671 79 5 0 5587 5665 596906779 596906701 1.380000e-22 119
11 TraesCS6B01G411900 chr4B 89.965 847 74 8 1 836 561005971 561006817 0.000000e+00 1083
12 TraesCS6B01G411900 chr3B 89.953 846 75 8 1 837 21629303 21628459 0.000000e+00 1083
13 TraesCS6B01G411900 chr1B 89.680 843 76 10 1 838 189342939 189342103 0.000000e+00 1064
14 TraesCS6B01G411900 chr5B 89.087 843 82 7 1 834 67665839 67664998 0.000000e+00 1038
15 TraesCS6B01G411900 chr5D 88.375 843 81 9 1 833 394148018 394148853 0.000000e+00 998
16 TraesCS6B01G411900 chr2A 88.070 855 78 13 1 837 679261747 679262595 0.000000e+00 992
17 TraesCS6B01G411900 chr7D 88.000 850 85 11 1 834 158938839 158939687 0.000000e+00 989
18 TraesCS6B01G411900 chr7D 83.663 202 29 4 7055 7254 45190527 45190726 3.730000e-43 187
19 TraesCS6B01G411900 chr7D 83.663 202 29 4 7055 7254 45226017 45226216 3.730000e-43 187
20 TraesCS6B01G411900 chr7B 88.109 841 87 11 1 832 389804036 389804872 0.000000e+00 987
21 TraesCS6B01G411900 chr2B 81.402 371 52 11 477 838 169380821 169380459 3.580000e-73 287
22 TraesCS6B01G411900 chrUn 87.850 107 13 0 7730 7836 274356881 274356987 8.260000e-25 126
23 TraesCS6B01G411900 chrUn 87.850 107 13 0 7730 7836 282245851 282245957 8.260000e-25 126
24 TraesCS6B01G411900 chrUn 87.850 107 13 0 7730 7836 378521041 378521147 8.260000e-25 126
25 TraesCS6B01G411900 chrUn 87.850 107 13 0 7730 7836 413087815 413087921 8.260000e-25 126
26 TraesCS6B01G411900 chr4A 87.850 107 13 0 7730 7836 656777065 656777171 8.260000e-25 126


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G411900 chr6B 685344381 685352217 7836 True 14473.0 14473 100.0000 1 7837 1 chr6B.!!$R1 7836
1 TraesCS6B01G411900 chr6D 451176964 451184885 7921 True 1959.6 6045 90.6086 1 7837 5 chr6D.!!$R1 7836
2 TraesCS6B01G411900 chr6A 596904721 596912863 8142 True 1798.2 4937 91.2916 834 7321 5 chr6A.!!$R1 6487
3 TraesCS6B01G411900 chr4B 561005971 561006817 846 False 1083.0 1083 89.9650 1 836 1 chr4B.!!$F1 835
4 TraesCS6B01G411900 chr3B 21628459 21629303 844 True 1083.0 1083 89.9530 1 837 1 chr3B.!!$R1 836
5 TraesCS6B01G411900 chr1B 189342103 189342939 836 True 1064.0 1064 89.6800 1 838 1 chr1B.!!$R1 837
6 TraesCS6B01G411900 chr5B 67664998 67665839 841 True 1038.0 1038 89.0870 1 834 1 chr5B.!!$R1 833
7 TraesCS6B01G411900 chr5D 394148018 394148853 835 False 998.0 998 88.3750 1 833 1 chr5D.!!$F1 832
8 TraesCS6B01G411900 chr2A 679261747 679262595 848 False 992.0 992 88.0700 1 837 1 chr2A.!!$F1 836
9 TraesCS6B01G411900 chr7D 158938839 158939687 848 False 989.0 989 88.0000 1 834 1 chr7D.!!$F3 833
10 TraesCS6B01G411900 chr7B 389804036 389804872 836 False 987.0 987 88.1090 1 832 1 chr7B.!!$F1 831

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
423 424 1.033746 CCTCTACCACCGGCTACGAA 61.034 60.000 0.00 0.0 44.60 3.85 F
1995 2102 0.249398 AGTAAGCTACAAGGCCACCG 59.751 55.000 5.01 0.0 0.00 4.94 F
3379 3510 0.532115 CCCACCCATGCTTTGCTAAC 59.468 55.000 0.00 0.0 0.00 2.34 F
3443 3574 0.315251 TCTTGCAGGACACTCACTCG 59.685 55.000 0.00 0.0 0.00 4.18 F
4219 4439 0.307760 GAAAGGAGGTTGTGCACACG 59.692 55.000 21.56 0.0 0.00 4.49 F
4985 5247 1.001487 TGAACCGCTGCAAACATCTTG 60.001 47.619 0.00 0.0 0.00 3.02 F
6304 8179 0.040067 ACGTGACGTAACGACCCTTC 60.040 55.000 31.52 0.0 46.49 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2282 2391 0.179073 GCGGATGAGCACTACCATGT 60.179 55.000 0.00 0.0 37.05 3.21 R
3413 3544 1.072331 TCCTGCAAGAGGAGTGGAAAC 59.928 52.381 0.00 0.0 46.96 2.78 R
4198 4393 0.179234 TGTGCACAACCTCCTTTCGA 59.821 50.000 19.28 0.0 0.00 3.71 R
4858 5095 0.413832 AGAGAAGGCCACTCACCCTA 59.586 55.000 24.73 0.0 36.91 3.53 R
5463 5736 1.342819 GGAAGAGGAGTCGGATGATGG 59.657 57.143 0.00 0.0 0.00 3.51 R
6524 8399 0.036388 TGTCCCTGGATCGTTTCAGC 60.036 55.000 0.00 0.0 0.00 4.26 R
7670 9678 0.321021 TACGCTCGGTTTTGGCCTTA 59.679 50.000 3.32 0.0 0.00 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 1.409521 CCTGTTGTGGTTCAGGTTGGA 60.410 52.381 3.38 0.00 44.19 3.53
269 270 1.098712 TGTCAAACACCTTGCGGTCC 61.099 55.000 0.00 0.00 43.24 4.46
392 393 2.699212 GTCCATAAACGTCGCCGC 59.301 61.111 0.00 0.00 37.70 6.53
423 424 1.033746 CCTCTACCACCGGCTACGAA 61.034 60.000 0.00 0.00 44.60 3.85
478 480 3.352338 CTCCTACGAAAGCGCGGGT 62.352 63.158 8.83 0.90 42.48 5.28
523 528 3.151710 CTGGTATGGACGGCCGGA 61.152 66.667 31.76 13.61 36.79 5.14
557 563 2.124860 GGCGGCCGGATAAAGTGT 60.125 61.111 29.38 0.00 0.00 3.55
702 727 1.950909 CCCAAACTCGGCACAAGTTTA 59.049 47.619 9.23 0.00 34.47 2.01
750 776 5.219633 CGAAATCCGGACATTTTTCTGTTT 58.780 37.500 20.47 8.86 33.91 2.83
779 805 3.961838 TTGGGCCGCGCTATTCGTT 62.962 57.895 5.56 0.00 41.07 3.85
786 812 1.071239 CCGCGCTATTCGTTCATTCTG 60.071 52.381 5.56 0.00 41.07 3.02
798 828 3.370978 CGTTCATTCTGTCCTAAACGCAT 59.629 43.478 0.00 0.00 34.01 4.73
1121 1159 4.785453 GTGGGGGAGGAGCAAGCG 62.785 72.222 0.00 0.00 0.00 4.68
1438 1484 1.202110 CGCATGCCAAGTTAAGCTCAG 60.202 52.381 13.15 0.00 0.00 3.35
1439 1485 1.468736 GCATGCCAAGTTAAGCTCAGC 60.469 52.381 6.36 0.00 0.00 4.26
1440 1486 2.089980 CATGCCAAGTTAAGCTCAGCT 58.910 47.619 0.00 0.00 42.56 4.24
1441 1487 1.813513 TGCCAAGTTAAGCTCAGCTC 58.186 50.000 0.00 0.00 38.25 4.09
1442 1488 1.072173 TGCCAAGTTAAGCTCAGCTCA 59.928 47.619 0.00 0.00 38.25 4.26
1484 1530 1.277842 ACGGCATTTCCCCCAAATTTC 59.722 47.619 0.00 0.00 31.79 2.17
1739 1843 1.971357 ACCAGGTTCCTCAGTGTACAG 59.029 52.381 0.00 0.00 0.00 2.74
1740 1844 2.248248 CCAGGTTCCTCAGTGTACAGA 58.752 52.381 0.00 0.00 0.00 3.41
1789 1893 3.945285 CACTGGTCACACTGTTAACCTTT 59.055 43.478 2.48 0.00 32.82 3.11
1812 1917 0.933700 CCCCATGGATTTGGTAGGGT 59.066 55.000 15.22 0.00 34.77 4.34
1842 1947 1.596477 GAGCTGATGATGGCCGACC 60.596 63.158 0.00 0.00 0.00 4.79
1931 2036 2.125552 CCCGATCTGCTCGCACAA 60.126 61.111 0.00 0.00 46.25 3.33
1937 2042 2.604914 CGATCTGCTCGCACAATACTTT 59.395 45.455 0.00 0.00 41.14 2.66
1940 2045 3.138304 TCTGCTCGCACAATACTTTGTT 58.862 40.909 0.00 0.00 43.57 2.83
1961 2066 1.138859 TCACGGCCTCATATCCTTGTG 59.861 52.381 0.00 0.00 0.00 3.33
1995 2102 0.249398 AGTAAGCTACAAGGCCACCG 59.751 55.000 5.01 0.00 0.00 4.94
2003 2110 1.898574 CAAGGCCACCGTCTTTGCT 60.899 57.895 5.01 0.00 0.00 3.91
2051 2159 7.761409 TCAGCTGATTTGTATAATGGTTTGAC 58.239 34.615 13.74 0.00 0.00 3.18
2053 2161 6.374333 AGCTGATTTGTATAATGGTTTGACGT 59.626 34.615 0.00 0.00 0.00 4.34
2100 2209 2.047274 CGCATTCCTCGTGGGTGT 60.047 61.111 3.23 0.00 36.25 4.16
2128 2237 4.775236 AGGTGCAAATGTTTAAAAAGGCA 58.225 34.783 0.00 0.00 0.00 4.75
2138 2247 4.201970 TGTTTAAAAAGGCAAGTCTGACCG 60.202 41.667 3.76 0.00 0.00 4.79
2193 2302 4.798574 GAAGGTTTCGATGCTTCACAATT 58.201 39.130 0.08 0.00 0.00 2.32
2236 2345 4.860022 AGGATACATTTCTTGACCTTGGG 58.140 43.478 0.00 0.00 41.41 4.12
2248 2357 3.186283 TGACCTTGGGCCTACTTTCATA 58.814 45.455 4.53 0.00 0.00 2.15
2262 2371 7.556635 GCCTACTTTCATAAAAGGTCTGGTATT 59.443 37.037 0.00 0.00 45.15 1.89
2272 2381 6.575162 AAAGGTCTGGTATTCATGTTTGAC 57.425 37.500 0.00 0.00 0.00 3.18
2276 2385 5.106555 GGTCTGGTATTCATGTTTGACAGTG 60.107 44.000 0.00 0.00 0.00 3.66
2278 2387 6.649141 GTCTGGTATTCATGTTTGACAGTGTA 59.351 38.462 0.00 0.00 0.00 2.90
2282 2391 7.717436 TGGTATTCATGTTTGACAGTGTAAAGA 59.283 33.333 0.00 0.00 0.00 2.52
2293 2402 4.315803 ACAGTGTAAAGACATGGTAGTGC 58.684 43.478 0.00 0.00 38.04 4.40
2300 2409 1.410517 AGACATGGTAGTGCTCATCCG 59.589 52.381 0.00 0.00 0.00 4.18
2307 2416 0.815095 TAGTGCTCATCCGCTTCGAA 59.185 50.000 0.00 0.00 0.00 3.71
2316 2425 2.579207 TCCGCTTCGAATTACTCCTG 57.421 50.000 0.00 0.00 0.00 3.86
2322 2431 3.425858 GCTTCGAATTACTCCTGATACGC 59.574 47.826 0.00 0.00 0.00 4.42
2333 2442 4.890581 ACTCCTGATACGCCTATCATATCC 59.109 45.833 5.96 0.00 38.47 2.59
2346 2455 7.151308 GCCTATCATATCCTATGTATGCAGTC 58.849 42.308 0.00 0.00 31.22 3.51
2352 2461 2.623416 TCCTATGTATGCAGTCGGACAG 59.377 50.000 11.27 3.23 0.00 3.51
2618 2735 1.453155 TTGAGGGAGAATTTGAGCGC 58.547 50.000 0.00 0.00 0.00 5.92
2749 2867 4.279420 AGAGAAAGATTGTTTGGAGTTGCC 59.721 41.667 0.00 0.00 37.10 4.52
2758 2876 6.767524 TTGTTTGGAGTTGCCGATATATTT 57.232 33.333 0.00 0.00 40.66 1.40
2975 3094 6.014070 TGGCCTGTCAATAGTAGTCACTTTTA 60.014 38.462 3.32 0.00 36.14 1.52
3004 3123 7.331089 ACAAGTTTTACCTTTCTATCCTCCT 57.669 36.000 0.00 0.00 0.00 3.69
3073 3192 6.370718 GGACACGAGAAGTACCACATAAATTT 59.629 38.462 0.00 0.00 0.00 1.82
3120 3249 1.464997 CCACGTCCTTTAGCTCTTTGC 59.535 52.381 0.00 0.00 43.29 3.68
3136 3265 5.049129 GCTCTTTGCTCTGACTGTACAATTT 60.049 40.000 0.00 0.00 38.95 1.82
3178 3309 4.008330 AGTCTCATTCTTGTGATGCTTGG 58.992 43.478 0.00 0.00 0.00 3.61
3198 3329 8.511321 TGCTTGGTTATTCAGTTGTTTACTATG 58.489 33.333 0.00 0.00 34.56 2.23
3285 3416 1.834263 GCTGATGAGTTGGGTAGAGGT 59.166 52.381 0.00 0.00 0.00 3.85
3320 3451 5.355350 AGTTGGACTACAATATTGAAGCTGC 59.645 40.000 22.16 7.01 41.95 5.25
3379 3510 0.532115 CCCACCCATGCTTTGCTAAC 59.468 55.000 0.00 0.00 0.00 2.34
3380 3511 1.255882 CCACCCATGCTTTGCTAACA 58.744 50.000 0.00 0.00 0.00 2.41
3381 3512 1.067635 CCACCCATGCTTTGCTAACAC 60.068 52.381 0.00 0.00 0.00 3.32
3399 3530 6.091441 GCTAACACATGTCTTCTCTAGGTTTG 59.909 42.308 0.00 0.00 0.00 2.93
3409 3540 6.369340 GTCTTCTCTAGGTTTGGTTTTAGCTC 59.631 42.308 0.00 0.00 0.00 4.09
3413 3544 5.253330 TCTAGGTTTGGTTTTAGCTCATGG 58.747 41.667 0.00 0.00 0.00 3.66
3443 3574 0.315251 TCTTGCAGGACACTCACTCG 59.685 55.000 0.00 0.00 0.00 4.18
3571 3702 6.012858 TCTCTGGCTAAAGGAATTTCTGGTAA 60.013 38.462 0.00 0.00 0.00 2.85
3638 3771 4.332819 CGCCTTCTTGACCTGGTATTTTAG 59.667 45.833 0.00 0.00 0.00 1.85
3641 3774 6.315642 GCCTTCTTGACCTGGTATTTTAGTAC 59.684 42.308 0.00 0.00 0.00 2.73
3699 3832 5.977635 TGTCCGATTTGACATAAGATGAGT 58.022 37.500 0.00 0.00 40.22 3.41
3709 3842 7.500720 TGACATAAGATGAGTGCCATAAATG 57.499 36.000 0.00 0.00 35.17 2.32
3714 3847 8.627403 CATAAGATGAGTGCCATAAATGAGTTT 58.373 33.333 0.00 0.00 35.17 2.66
3740 3875 5.625568 ACCAACCAAGTAGTAGTTCTTGT 57.374 39.130 13.86 2.55 39.25 3.16
3799 3934 5.695851 AACTTGGTGAGTGCTTCTTTATG 57.304 39.130 0.00 0.00 39.00 1.90
3800 3935 4.718961 ACTTGGTGAGTGCTTCTTTATGT 58.281 39.130 0.00 0.00 37.17 2.29
3801 3936 5.133221 ACTTGGTGAGTGCTTCTTTATGTT 58.867 37.500 0.00 0.00 37.17 2.71
3803 3938 5.437289 TGGTGAGTGCTTCTTTATGTTTG 57.563 39.130 0.00 0.00 0.00 2.93
3826 3976 5.009610 TGAAAGGTTGCAATTCAGGTAGTTC 59.990 40.000 0.59 0.00 0.00 3.01
3828 3978 4.074970 AGGTTGCAATTCAGGTAGTTCTG 58.925 43.478 0.59 0.00 36.17 3.02
3834 3984 4.392138 GCAATTCAGGTAGTTCTGTACCAC 59.608 45.833 3.01 0.00 44.53 4.16
3848 3998 2.701423 TGTACCACCTTGTGCTTGTCTA 59.299 45.455 0.00 0.00 31.34 2.59
3856 4006 6.375455 CCACCTTGTGCTTGTCTAAGAATAAT 59.625 38.462 0.00 0.00 35.92 1.28
3862 4012 7.829725 TGTGCTTGTCTAAGAATAATGCAAAT 58.170 30.769 0.00 0.00 35.92 2.32
3899 4050 8.729805 ATCTTGAATCTTGAAGGATGTTCTAC 57.270 34.615 0.00 0.00 0.00 2.59
3917 4070 8.169977 TGTTCTACAGTATATAGGGTTTACCG 57.830 38.462 0.00 0.00 46.96 4.02
3926 4079 7.935210 AGTATATAGGGTTTACCGACAATTTGG 59.065 37.037 0.78 0.00 46.96 3.28
3933 4086 5.986741 GGTTTACCGACAATTTGGACATTTT 59.013 36.000 0.78 0.00 0.00 1.82
3936 4089 9.198837 GTTTACCGACAATTTGGACATTTTATT 57.801 29.630 0.78 0.00 0.00 1.40
3941 4094 9.579768 CCGACAATTTGGACATTTTATTATTCA 57.420 29.630 0.78 0.00 0.00 2.57
3957 4110 5.880054 TTATTCAGTTTGAGCTTACTGGC 57.120 39.130 18.61 0.00 41.58 4.85
3960 4113 2.158682 TCAGTTTGAGCTTACTGGCCAA 60.159 45.455 7.01 0.00 41.58 4.52
3961 4114 2.030805 CAGTTTGAGCTTACTGGCCAAC 60.031 50.000 7.01 0.00 38.44 3.77
3974 4127 4.805219 ACTGGCCAACGATTTTAACATTC 58.195 39.130 7.01 0.00 0.00 2.67
4011 4164 6.938030 TCGATAACAAGGTCAATAAAGGTGTT 59.062 34.615 0.00 0.00 0.00 3.32
4015 4168 5.445964 ACAAGGTCAATAAAGGTGTTGAGT 58.554 37.500 0.00 0.00 35.76 3.41
4041 4194 6.109156 TCATTAGTACAGCTCCTTGAAACA 57.891 37.500 0.00 0.00 0.00 2.83
4138 4291 7.061441 CAGTTTATTTCTGTTGCATGCTACAAG 59.939 37.037 29.84 23.42 32.03 3.16
4139 4292 6.573664 TTATTTCTGTTGCATGCTACAAGT 57.426 33.333 29.84 18.07 32.03 3.16
4140 4293 7.680442 TTATTTCTGTTGCATGCTACAAGTA 57.320 32.000 29.84 19.54 32.03 2.24
4143 4296 6.573664 TTCTGTTGCATGCTACAAGTAAAT 57.426 33.333 29.84 0.00 32.03 1.40
4144 4297 5.941733 TCTGTTGCATGCTACAAGTAAATG 58.058 37.500 29.84 18.81 32.03 2.32
4145 4298 5.704978 TCTGTTGCATGCTACAAGTAAATGA 59.295 36.000 29.84 20.45 32.03 2.57
4148 4303 5.801350 TGCATGCTACAAGTAAATGACTC 57.199 39.130 20.33 0.00 37.44 3.36
4162 4317 7.493367 AGTAAATGACTCCTACAGTAATGAGC 58.507 38.462 0.00 2.44 34.41 4.26
4182 4376 9.970553 AATGAGCAGACAATATATTCATATGGT 57.029 29.630 2.13 0.55 34.48 3.55
4219 4439 0.307760 GAAAGGAGGTTGTGCACACG 59.692 55.000 21.56 0.00 0.00 4.49
4231 4451 2.258755 GTGCACACGGCCATTTTATTC 58.741 47.619 13.17 0.00 43.89 1.75
4264 4484 9.936759 TTATCACATATGACACAAACTACAAGA 57.063 29.630 10.38 0.00 37.79 3.02
4268 4488 6.936900 ACATATGACACAAACTACAAGAGCTT 59.063 34.615 10.38 0.00 0.00 3.74
4270 4490 9.102757 CATATGACACAAACTACAAGAGCTTAT 57.897 33.333 0.00 0.00 0.00 1.73
4285 4505 7.063544 ACAAGAGCTTATAGTTTAGTTTGCTCG 59.936 37.037 0.00 0.00 46.85 5.03
4286 4506 6.864342 AGAGCTTATAGTTTAGTTTGCTCGA 58.136 36.000 0.00 0.00 46.85 4.04
4289 4509 7.265673 AGCTTATAGTTTAGTTTGCTCGATGA 58.734 34.615 0.00 0.00 0.00 2.92
4306 4526 9.184062 TGCTCGATGAAATTATATTTCAATTGC 57.816 29.630 16.17 16.34 41.16 3.56
4307 4527 9.184062 GCTCGATGAAATTATATTTCAATTGCA 57.816 29.630 16.17 0.00 41.16 4.08
4453 4673 4.520492 CACATAGTAAATGGAGATTGGGCC 59.480 45.833 0.00 0.00 0.00 5.80
4469 4689 1.340697 GGGCCTCCCTTGTTTACGATT 60.341 52.381 0.84 0.00 41.34 3.34
4474 4694 4.879545 GCCTCCCTTGTTTACGATTTGATA 59.120 41.667 0.00 0.00 0.00 2.15
4510 4730 5.011329 TGTTCCACCAAGAACTAATCTACGT 59.989 40.000 6.04 0.00 45.25 3.57
4513 4733 4.103357 CACCAAGAACTAATCTACGTCGG 58.897 47.826 0.00 0.00 37.42 4.79
4519 4739 2.715046 ACTAATCTACGTCGGGTGACA 58.285 47.619 0.00 0.00 45.80 3.58
4534 4754 5.946972 TCGGGTGACAATGGTAATATGTTTT 59.053 36.000 0.00 0.00 0.00 2.43
4535 4755 6.033341 CGGGTGACAATGGTAATATGTTTTG 58.967 40.000 0.00 0.00 0.00 2.44
4536 4756 5.810074 GGGTGACAATGGTAATATGTTTTGC 59.190 40.000 0.00 0.00 0.00 3.68
4546 4767 9.970395 ATGGTAATATGTTTTGCAGAATATGTG 57.030 29.630 9.15 0.00 0.00 3.21
4553 4774 8.891671 ATGTTTTGCAGAATATGTGTTTTCTT 57.108 26.923 0.00 0.00 29.85 2.52
4569 4790 5.774690 TGTTTTCTTTATCAGTGGGCTCAAT 59.225 36.000 0.00 0.00 0.00 2.57
4581 4802 6.437162 TCAGTGGGCTCAATTAATTTTAAGCT 59.563 34.615 18.99 0.00 0.00 3.74
4582 4803 7.039082 TCAGTGGGCTCAATTAATTTTAAGCTT 60.039 33.333 18.99 3.48 0.00 3.74
4583 4804 7.603784 CAGTGGGCTCAATTAATTTTAAGCTTT 59.396 33.333 18.99 0.00 0.00 3.51
4584 4805 8.811994 AGTGGGCTCAATTAATTTTAAGCTTTA 58.188 29.630 18.99 0.00 0.00 1.85
4598 4819 8.797350 TTTTAAGCTTTATACTACCCTTGGAC 57.203 34.615 3.20 0.00 0.00 4.02
4608 4829 2.879103 ACCCTTGGACCATTGTGTAG 57.121 50.000 0.00 0.00 0.00 2.74
4641 4862 8.292444 TGTATAAGATTTCCCACCAAAAGATG 57.708 34.615 0.00 0.00 0.00 2.90
4671 4895 7.277760 CAGATTCGTTGTCCACACAATTATCTA 59.722 37.037 8.05 0.00 44.47 1.98
4678 4902 5.163405 TGTCCACACAATTATCTAGCCTCTC 60.163 44.000 0.00 0.00 0.00 3.20
4685 4910 7.238514 ACACAATTATCTAGCCTCTCCCATTAT 59.761 37.037 0.00 0.00 0.00 1.28
4687 4912 6.723298 ATTATCTAGCCTCTCCCATTATCG 57.277 41.667 0.00 0.00 0.00 2.92
4729 4954 8.694540 TGGGTTATGAACTCATAATTCATTTGG 58.305 33.333 13.76 0.00 46.63 3.28
4742 4967 8.761497 CATAATTCATTTGGATGCTGTGATTTC 58.239 33.333 0.00 0.00 33.14 2.17
4744 4969 3.448301 TCATTTGGATGCTGTGATTTCCC 59.552 43.478 0.00 0.00 33.14 3.97
4745 4970 2.601240 TTGGATGCTGTGATTTCCCA 57.399 45.000 0.00 0.00 0.00 4.37
4748 4973 1.616725 GGATGCTGTGATTTCCCACCA 60.617 52.381 0.00 0.00 36.26 4.17
4749 4974 2.170166 GATGCTGTGATTTCCCACCAA 58.830 47.619 0.00 0.00 36.26 3.67
4751 4976 2.392662 TGCTGTGATTTCCCACCAAAA 58.607 42.857 0.00 0.00 36.26 2.44
4752 4977 2.364970 TGCTGTGATTTCCCACCAAAAG 59.635 45.455 0.00 0.00 36.26 2.27
4754 4979 3.259123 GCTGTGATTTCCCACCAAAAGAT 59.741 43.478 0.00 0.00 36.26 2.40
4755 4980 4.813027 CTGTGATTTCCCACCAAAAGATG 58.187 43.478 0.00 0.00 36.26 2.90
4759 4996 5.466393 GTGATTTCCCACCAAAAGATGTTTG 59.534 40.000 0.00 0.00 0.00 2.93
4765 5002 7.130681 TCCCACCAAAAGATGTTTGTAATTT 57.869 32.000 0.00 0.00 0.00 1.82
4766 5003 6.989169 TCCCACCAAAAGATGTTTGTAATTTG 59.011 34.615 0.00 0.00 0.00 2.32
4769 5006 8.672815 CCACCAAAAGATGTTTGTAATTTGTTT 58.327 29.630 0.00 0.00 0.00 2.83
4858 5095 6.542821 TGGAATTCCAGACATCAAGTTTAGT 58.457 36.000 23.63 0.00 42.01 2.24
4868 5105 5.794894 ACATCAAGTTTAGTAGGGTGAGTG 58.205 41.667 0.00 0.00 0.00 3.51
4894 5133 5.449862 CCTTCTCTCTGTAGATTCAGTTCCG 60.450 48.000 0.00 0.00 36.85 4.30
4915 5154 5.475909 TCCGTATACAGTTGGTCTGATATCC 59.524 44.000 3.32 0.00 46.27 2.59
4917 5156 5.477291 CGTATACAGTTGGTCTGATATCCCT 59.523 44.000 3.32 0.00 46.27 4.20
4920 5159 9.696572 GTATACAGTTGGTCTGATATCCCTATA 57.303 37.037 0.00 0.00 46.27 1.31
4922 5161 7.487822 ACAGTTGGTCTGATATCCCTATATG 57.512 40.000 0.00 0.00 46.27 1.78
4927 5166 8.470805 GTTGGTCTGATATCCCTATATGTGTAG 58.529 40.741 0.00 0.00 0.00 2.74
4929 5168 7.834681 TGGTCTGATATCCCTATATGTGTAGTC 59.165 40.741 0.00 0.00 0.00 2.59
4985 5247 1.001487 TGAACCGCTGCAAACATCTTG 60.001 47.619 0.00 0.00 0.00 3.02
5009 5271 7.064229 TGTAGGTACTTGGAAAAATTTGGTCT 58.936 34.615 0.00 0.00 41.75 3.85
5054 5316 4.377022 CGTATGCCACCATATTTTACGCTC 60.377 45.833 0.00 0.00 36.40 5.03
5098 5360 4.365514 TGGAAGGTTAGCTTGTTCATCA 57.634 40.909 0.00 0.00 0.00 3.07
5100 5362 4.041567 TGGAAGGTTAGCTTGTTCATCAGA 59.958 41.667 0.00 0.00 0.00 3.27
5104 5366 4.940046 AGGTTAGCTTGTTCATCAGATGTG 59.060 41.667 10.34 0.00 0.00 3.21
5110 5372 5.354513 AGCTTGTTCATCAGATGTGAAGATG 59.645 40.000 10.34 2.16 40.29 2.90
5111 5373 5.556355 TTGTTCATCAGATGTGAAGATGC 57.444 39.130 10.34 0.00 39.12 3.91
5131 5393 8.757982 AGATGCTGAACTGGTTTGATAAATAT 57.242 30.769 0.00 0.00 0.00 1.28
5132 5394 8.627403 AGATGCTGAACTGGTTTGATAAATATG 58.373 33.333 0.00 0.00 0.00 1.78
5177 5439 4.153986 CAGCTTAGTCTGTTTTGATTGCG 58.846 43.478 0.00 0.00 0.00 4.85
5198 5460 5.529430 TGCGATTTGTTTCTTCAGAGGTTTA 59.471 36.000 0.00 0.00 0.00 2.01
5202 5464 8.905702 CGATTTGTTTCTTCAGAGGTTTATTTG 58.094 33.333 0.00 0.00 0.00 2.32
5274 5540 2.590821 ACATTTCAGGCAGCATATCCC 58.409 47.619 0.00 0.00 0.00 3.85
5360 5632 8.272889 GGTACTCCTTTATCCCAGTTAATTTCT 58.727 37.037 0.00 0.00 0.00 2.52
5432 5705 3.873952 AGCTTCACTGTTCTGTTGTCTTC 59.126 43.478 0.00 0.00 0.00 2.87
5433 5706 3.002759 GCTTCACTGTTCTGTTGTCTTCC 59.997 47.826 0.00 0.00 0.00 3.46
5434 5707 4.446371 CTTCACTGTTCTGTTGTCTTCCT 58.554 43.478 0.00 0.00 0.00 3.36
5435 5708 4.487714 TCACTGTTCTGTTGTCTTCCTT 57.512 40.909 0.00 0.00 0.00 3.36
5463 5736 9.573102 GCTAAAGTTAGTCTTTTAAACACGTAC 57.427 33.333 0.00 0.00 42.95 3.67
5482 5755 2.035632 ACCATCATCCGACTCCTCTTC 58.964 52.381 0.00 0.00 0.00 2.87
5483 5756 1.342819 CCATCATCCGACTCCTCTTCC 59.657 57.143 0.00 0.00 0.00 3.46
5491 5764 5.277857 TCCGACTCCTCTTCCATAAAATC 57.722 43.478 0.00 0.00 0.00 2.17
5493 5766 5.366768 TCCGACTCCTCTTCCATAAAATCAT 59.633 40.000 0.00 0.00 0.00 2.45
5514 5787 7.792374 TCATTAGTTTTCAGCTAATAGGCAG 57.208 36.000 0.00 0.00 37.12 4.85
5541 5814 9.390795 CACTCAGCAATATACTTTCATATTTGC 57.609 33.333 0.00 0.00 30.35 3.68
5542 5815 9.123902 ACTCAGCAATATACTTTCATATTTGCA 57.876 29.630 7.39 0.00 32.86 4.08
5606 7149 8.124808 AGAATCTCTTTACCTCGACTACTTTT 57.875 34.615 0.00 0.00 0.00 2.27
5646 7189 4.158384 CACATTTAAGCAGCGGTGTTTAG 58.842 43.478 20.51 13.54 31.75 1.85
5670 7497 0.537653 GCCGAGGCCTATTATCTCCC 59.462 60.000 4.42 0.00 34.56 4.30
5671 7498 1.897647 GCCGAGGCCTATTATCTCCCT 60.898 57.143 4.42 0.00 34.56 4.20
5672 7499 2.623502 GCCGAGGCCTATTATCTCCCTA 60.624 54.545 4.42 0.00 34.56 3.53
5673 7500 3.292460 CCGAGGCCTATTATCTCCCTAG 58.708 54.545 4.42 0.00 0.00 3.02
5674 7501 3.053544 CCGAGGCCTATTATCTCCCTAGA 60.054 52.174 4.42 0.00 35.80 2.43
5693 7524 3.358118 AGACTCCCTAGTTCCTCTTTCG 58.642 50.000 0.00 0.00 35.56 3.46
5737 7568 2.052690 TCTAGCTGCTCCGGTGGTC 61.053 63.158 4.91 0.00 0.00 4.02
5772 7603 3.980646 TGGAAACAGGTCACAATTTCG 57.019 42.857 0.00 0.00 32.87 3.46
5780 7611 2.742053 AGGTCACAATTTCGATGTTCCG 59.258 45.455 0.00 0.00 31.53 4.30
5855 7725 6.516739 TGTAACACAGGTGATTTTCAACAA 57.483 33.333 6.40 0.00 36.30 2.83
5859 7729 6.279513 ACACAGGTGATTTTCAACAAAAGA 57.720 33.333 6.40 0.00 36.30 2.52
5901 7771 5.368256 AGATTGCAGTGTTTCTAAAGCTG 57.632 39.130 0.00 0.00 0.00 4.24
5935 7805 6.183347 AGGTAGATTTCCAGTTCTGGATTTG 58.817 40.000 20.26 0.00 37.87 2.32
5937 7807 6.094186 GGTAGATTTCCAGTTCTGGATTTGTC 59.906 42.308 20.26 15.10 37.87 3.18
6049 7920 9.734620 TCAAACAAATATTCAGTTTTGTCTGAG 57.265 29.630 13.35 4.77 43.33 3.35
6051 7922 6.681777 ACAAATATTCAGTTTTGTCTGAGGC 58.318 36.000 0.00 0.00 40.99 4.70
6052 7923 6.265196 ACAAATATTCAGTTTTGTCTGAGGCA 59.735 34.615 0.00 0.00 40.99 4.75
6053 7924 7.039504 ACAAATATTCAGTTTTGTCTGAGGCAT 60.040 33.333 0.00 0.00 40.99 4.40
6144 8019 1.283321 GAGAGAAAGGGCCTGGATGTT 59.717 52.381 6.92 0.00 0.00 2.71
6165 8040 2.430465 TCAAACCTTGCAGAGATCAGC 58.570 47.619 0.00 0.00 0.00 4.26
6289 8164 4.209288 GGCTTATAATGACAGCAGTACGTG 59.791 45.833 0.00 0.00 35.05 4.49
6304 8179 0.040067 ACGTGACGTAACGACCCTTC 60.040 55.000 31.52 0.00 46.49 3.46
6318 8193 0.928229 CCCTTCGCTATTTTCGGACG 59.072 55.000 0.00 0.00 0.00 4.79
6347 8222 0.179051 CTGAATCAGCTGGCTCTCCC 60.179 60.000 15.13 0.00 0.00 4.30
6369 8244 4.686554 CCGACTGTTCTTTCCTGAACTAAG 59.313 45.833 8.52 2.27 44.63 2.18
6376 8251 4.642429 TCTTTCCTGAACTAAGCTGAACC 58.358 43.478 0.00 0.00 0.00 3.62
6519 8394 0.401738 CCAGTGGATGGTCAAGGTGT 59.598 55.000 1.68 0.00 44.91 4.16
6524 8399 1.078426 GATGGTCAAGGTGTCCGGG 60.078 63.158 0.00 0.00 0.00 5.73
6543 8418 0.036388 GCTGAAACGATCCAGGGACA 60.036 55.000 0.00 0.00 0.00 4.02
6560 8435 1.003355 CAGCATGGGTGACGACCTT 60.003 57.895 0.00 0.00 42.66 3.50
6596 8471 1.534729 AAGAAGCACCGATTTCACCC 58.465 50.000 0.00 0.00 0.00 4.61
6597 8472 0.400213 AGAAGCACCGATTTCACCCA 59.600 50.000 0.00 0.00 0.00 4.51
6665 8540 8.463930 AGGTCATATTCTCAAAGTTTGTCAAA 57.536 30.769 15.08 8.56 0.00 2.69
6684 8559 0.567182 AGATCTCAGGGAGGAGCCAT 59.433 55.000 0.00 0.00 38.95 4.40
6791 8672 2.808598 GGAGGAGTATCTGCCGACA 58.191 57.895 0.00 0.00 33.73 4.35
6792 8673 0.386113 GGAGGAGTATCTGCCGACAC 59.614 60.000 0.00 0.00 33.73 3.67
6830 8711 4.796231 CCGCCGCAGTTAGCTCGT 62.796 66.667 0.00 0.00 42.61 4.18
6858 8739 1.539827 AGTTTGTAAATGAGCACGCCC 59.460 47.619 0.00 0.00 0.00 6.13
6860 8741 0.878416 TTGTAAATGAGCACGCCCAC 59.122 50.000 0.00 0.00 0.00 4.61
6974 8884 6.320171 ACGTGCAACATTACTAGTAGTACTG 58.680 40.000 20.44 20.44 37.38 2.74
6976 8886 7.119699 ACGTGCAACATTACTAGTAGTACTGTA 59.880 37.037 25.24 13.03 41.70 2.74
7013 8923 0.961753 GCTGGGACTTCAGTTTTGGG 59.038 55.000 0.00 0.00 37.12 4.12
7300 9210 2.269940 ACCTTAGCCTCAGTTCATGGT 58.730 47.619 0.00 0.00 0.00 3.55
7400 9311 3.728845 GAAGGGCACGCTCTTAATATCA 58.271 45.455 3.65 0.00 36.79 2.15
7402 9313 4.357918 AGGGCACGCTCTTAATATCATT 57.642 40.909 0.00 0.00 0.00 2.57
7423 9334 0.034380 AATGTCCAGAGCAGCTGCAT 60.034 50.000 38.24 24.58 43.50 3.96
7424 9335 0.748367 ATGTCCAGAGCAGCTGCATG 60.748 55.000 38.24 32.42 43.50 4.06
7432 9343 1.130749 GAGCAGCTGCATGTTCAGAAG 59.869 52.381 38.24 0.00 45.16 2.85
7434 9345 0.809385 CAGCTGCATGTTCAGAAGGG 59.191 55.000 0.00 0.00 36.19 3.95
7435 9346 0.323178 AGCTGCATGTTCAGAAGGGG 60.323 55.000 1.02 0.00 36.19 4.79
7437 9348 1.171308 CTGCATGTTCAGAAGGGGTG 58.829 55.000 0.00 0.00 36.19 4.61
7438 9349 0.895100 TGCATGTTCAGAAGGGGTGC 60.895 55.000 0.00 0.00 0.00 5.01
7439 9350 0.895100 GCATGTTCAGAAGGGGTGCA 60.895 55.000 0.00 0.00 0.00 4.57
7440 9351 1.619654 CATGTTCAGAAGGGGTGCAA 58.380 50.000 0.00 0.00 0.00 4.08
7443 9354 1.962807 TGTTCAGAAGGGGTGCAAATG 59.037 47.619 0.00 0.00 0.00 2.32
7445 9356 1.909700 TCAGAAGGGGTGCAAATGTC 58.090 50.000 0.00 0.00 0.00 3.06
7446 9357 0.523072 CAGAAGGGGTGCAAATGTCG 59.477 55.000 0.00 0.00 0.00 4.35
7447 9358 0.609131 AGAAGGGGTGCAAATGTCGG 60.609 55.000 0.00 0.00 0.00 4.79
7448 9359 0.893727 GAAGGGGTGCAAATGTCGGT 60.894 55.000 0.00 0.00 0.00 4.69
7449 9360 0.469144 AAGGGGTGCAAATGTCGGTT 60.469 50.000 0.00 0.00 0.00 4.44
7451 9362 0.808755 GGGGTGCAAATGTCGGTTAG 59.191 55.000 0.00 0.00 0.00 2.34
7453 9364 0.808755 GGTGCAAATGTCGGTTAGGG 59.191 55.000 0.00 0.00 0.00 3.53
7454 9365 1.612199 GGTGCAAATGTCGGTTAGGGA 60.612 52.381 0.00 0.00 0.00 4.20
7455 9366 2.156098 GTGCAAATGTCGGTTAGGGAA 58.844 47.619 0.00 0.00 0.00 3.97
7456 9367 2.752903 GTGCAAATGTCGGTTAGGGAAT 59.247 45.455 0.00 0.00 0.00 3.01
7457 9368 2.752354 TGCAAATGTCGGTTAGGGAATG 59.248 45.455 0.00 0.00 0.00 2.67
7458 9369 2.479560 GCAAATGTCGGTTAGGGAATGC 60.480 50.000 0.00 0.00 0.00 3.56
7462 9408 1.557371 TGTCGGTTAGGGAATGCATGA 59.443 47.619 0.00 0.00 0.00 3.07
7463 9409 2.172505 TGTCGGTTAGGGAATGCATGAT 59.827 45.455 0.00 0.00 0.00 2.45
7466 9412 2.951642 CGGTTAGGGAATGCATGATTGT 59.048 45.455 0.00 0.00 0.00 2.71
7478 9424 3.007074 TGCATGATTGTGGTTGCATTCTT 59.993 39.130 0.00 0.00 39.98 2.52
7481 9427 4.933505 TGATTGTGGTTGCATTCTTGAA 57.066 36.364 0.00 0.00 0.00 2.69
7482 9428 5.471556 TGATTGTGGTTGCATTCTTGAAT 57.528 34.783 0.00 0.00 0.00 2.57
7483 9429 5.472148 TGATTGTGGTTGCATTCTTGAATC 58.528 37.500 0.00 0.00 0.00 2.52
7484 9430 5.244402 TGATTGTGGTTGCATTCTTGAATCT 59.756 36.000 0.00 0.00 0.00 2.40
7485 9431 4.771590 TGTGGTTGCATTCTTGAATCTC 57.228 40.909 0.00 0.00 0.00 2.75
7490 9436 5.122239 TGGTTGCATTCTTGAATCTCTAACG 59.878 40.000 0.00 0.00 0.00 3.18
7495 9441 6.206634 TGCATTCTTGAATCTCTAACGGTTTT 59.793 34.615 0.00 0.00 0.00 2.43
7496 9442 7.389330 TGCATTCTTGAATCTCTAACGGTTTTA 59.611 33.333 0.00 0.00 0.00 1.52
7497 9443 7.905493 GCATTCTTGAATCTCTAACGGTTTTAG 59.095 37.037 0.00 0.00 0.00 1.85
7500 9446 7.848128 TCTTGAATCTCTAACGGTTTTAGGAT 58.152 34.615 0.00 0.00 0.00 3.24
7502 9448 8.937634 TTGAATCTCTAACGGTTTTAGGATAC 57.062 34.615 0.00 0.00 0.00 2.24
7503 9449 8.070034 TGAATCTCTAACGGTTTTAGGATACA 57.930 34.615 0.00 0.00 41.41 2.29
7506 9452 9.543783 AATCTCTAACGGTTTTAGGATACATTC 57.456 33.333 0.00 0.00 41.41 2.67
7511 9457 9.273016 CTAACGGTTTTAGGATACATTCATCAT 57.727 33.333 0.00 0.00 41.41 2.45
7512 9458 7.730364 ACGGTTTTAGGATACATTCATCATC 57.270 36.000 0.00 0.00 41.41 2.92
7515 9461 8.285394 CGGTTTTAGGATACATTCATCATCTTG 58.715 37.037 0.00 0.00 41.41 3.02
7522 9468 9.722184 AGGATACATTCATCATCTTGATAGTTG 57.278 33.333 0.00 0.00 35.01 3.16
7523 9469 9.716531 GGATACATTCATCATCTTGATAGTTGA 57.283 33.333 0.00 0.00 34.28 3.18
7533 9479 9.950496 ATCATCTTGATAGTTGATACATAACCC 57.050 33.333 0.00 0.00 38.46 4.11
7558 9566 9.512435 CCAAGAATAGAAATGTTTAGATGCAAG 57.488 33.333 0.00 0.00 0.00 4.01
7561 9569 9.236006 AGAATAGAAATGTTTAGATGCAAGTGT 57.764 29.630 0.00 0.00 0.00 3.55
7562 9570 9.846248 GAATAGAAATGTTTAGATGCAAGTGTT 57.154 29.630 0.00 0.00 0.00 3.32
7564 9572 6.449698 AGAAATGTTTAGATGCAAGTGTTGG 58.550 36.000 0.00 0.00 0.00 3.77
7567 9575 6.594788 ATGTTTAGATGCAAGTGTTGGAAT 57.405 33.333 0.00 0.00 33.68 3.01
7568 9576 5.771469 TGTTTAGATGCAAGTGTTGGAATG 58.229 37.500 0.00 0.00 33.68 2.67
7569 9577 5.534278 TGTTTAGATGCAAGTGTTGGAATGA 59.466 36.000 0.00 0.00 33.68 2.57
7571 9579 6.647334 TTAGATGCAAGTGTTGGAATGAAA 57.353 33.333 0.00 0.00 33.68 2.69
7572 9580 5.733620 AGATGCAAGTGTTGGAATGAAAT 57.266 34.783 0.00 0.00 33.68 2.17
7574 9582 4.669206 TGCAAGTGTTGGAATGAAATGT 57.331 36.364 0.00 0.00 0.00 2.71
7578 9586 5.590145 CAAGTGTTGGAATGAAATGTGTCA 58.410 37.500 0.00 0.00 0.00 3.58
7579 9587 6.218019 CAAGTGTTGGAATGAAATGTGTCAT 58.782 36.000 0.00 0.00 40.01 3.06
7581 9589 6.218019 AGTGTTGGAATGAAATGTGTCATTG 58.782 36.000 3.22 0.00 45.98 2.82
7582 9590 5.406175 GTGTTGGAATGAAATGTGTCATTGG 59.594 40.000 3.22 0.00 45.98 3.16
7583 9591 5.070180 TGTTGGAATGAAATGTGTCATTGGT 59.930 36.000 3.22 0.00 45.98 3.67
7584 9592 5.389859 TGGAATGAAATGTGTCATTGGTC 57.610 39.130 3.22 0.00 45.98 4.02
7585 9593 4.220382 TGGAATGAAATGTGTCATTGGTCC 59.780 41.667 3.22 0.30 45.98 4.46
7586 9594 4.414852 GAATGAAATGTGTCATTGGTCCG 58.585 43.478 3.22 0.00 45.98 4.79
7587 9595 2.857483 TGAAATGTGTCATTGGTCCGT 58.143 42.857 0.00 0.00 0.00 4.69
7588 9596 3.218453 TGAAATGTGTCATTGGTCCGTT 58.782 40.909 0.00 0.00 0.00 4.44
7589 9597 4.390264 TGAAATGTGTCATTGGTCCGTTA 58.610 39.130 0.00 0.00 0.00 3.18
7590 9598 4.822350 TGAAATGTGTCATTGGTCCGTTAA 59.178 37.500 0.00 0.00 0.00 2.01
7591 9599 4.759516 AATGTGTCATTGGTCCGTTAAC 57.240 40.909 0.00 0.00 0.00 2.01
7592 9600 3.478857 TGTGTCATTGGTCCGTTAACT 57.521 42.857 3.71 0.00 0.00 2.24
7593 9601 3.395639 TGTGTCATTGGTCCGTTAACTC 58.604 45.455 3.71 0.00 0.00 3.01
7594 9602 3.181464 TGTGTCATTGGTCCGTTAACTCA 60.181 43.478 3.71 0.00 0.00 3.41
7595 9603 3.810941 GTGTCATTGGTCCGTTAACTCAA 59.189 43.478 3.71 3.94 0.00 3.02
7596 9604 4.273969 GTGTCATTGGTCCGTTAACTCAAA 59.726 41.667 3.71 0.00 0.00 2.69
7597 9605 5.048991 GTGTCATTGGTCCGTTAACTCAAAT 60.049 40.000 3.71 0.00 0.00 2.32
7598 9606 5.533154 TGTCATTGGTCCGTTAACTCAAATT 59.467 36.000 3.71 0.00 0.00 1.82
7599 9607 6.711194 TGTCATTGGTCCGTTAACTCAAATTA 59.289 34.615 3.71 0.00 0.00 1.40
7600 9608 7.228906 TGTCATTGGTCCGTTAACTCAAATTAA 59.771 33.333 3.71 0.00 0.00 1.40
7601 9609 8.241367 GTCATTGGTCCGTTAACTCAAATTAAT 58.759 33.333 3.71 0.00 0.00 1.40
7602 9610 8.798402 TCATTGGTCCGTTAACTCAAATTAATT 58.202 29.630 3.71 0.00 0.00 1.40
7603 9611 8.859156 CATTGGTCCGTTAACTCAAATTAATTG 58.141 33.333 0.39 0.00 40.58 2.32
7604 9612 6.383415 TGGTCCGTTAACTCAAATTAATTGC 58.617 36.000 0.39 0.00 38.98 3.56
7605 9613 6.016192 TGGTCCGTTAACTCAAATTAATTGCA 60.016 34.615 0.39 0.00 38.98 4.08
7606 9614 6.307077 GGTCCGTTAACTCAAATTAATTGCAC 59.693 38.462 0.39 0.00 38.98 4.57
7607 9615 6.858993 GTCCGTTAACTCAAATTAATTGCACA 59.141 34.615 0.39 0.00 38.98 4.57
7608 9616 6.858993 TCCGTTAACTCAAATTAATTGCACAC 59.141 34.615 0.39 0.00 38.98 3.82
7609 9617 6.861055 CCGTTAACTCAAATTAATTGCACACT 59.139 34.615 0.39 0.00 38.98 3.55
7610 9618 7.381139 CCGTTAACTCAAATTAATTGCACACTT 59.619 33.333 0.39 0.00 38.98 3.16
7611 9619 8.751335 CGTTAACTCAAATTAATTGCACACTTT 58.249 29.630 0.39 0.00 38.98 2.66
7612 9620 9.848172 GTTAACTCAAATTAATTGCACACTTTG 57.152 29.630 0.39 0.00 38.98 2.77
7613 9621 7.481275 AACTCAAATTAATTGCACACTTTGG 57.519 32.000 0.39 0.00 38.98 3.28
7614 9622 5.990996 ACTCAAATTAATTGCACACTTTGGG 59.009 36.000 0.39 0.00 38.98 4.12
7621 9629 3.812577 GCACACTTTGGGCCAATAC 57.187 52.632 21.65 2.45 41.97 1.89
7622 9630 1.256812 GCACACTTTGGGCCAATACT 58.743 50.000 21.65 2.14 41.97 2.12
7623 9631 1.618343 GCACACTTTGGGCCAATACTT 59.382 47.619 21.65 2.26 41.97 2.24
7624 9632 2.037121 GCACACTTTGGGCCAATACTTT 59.963 45.455 21.65 0.69 41.97 2.66
7625 9633 3.652274 CACACTTTGGGCCAATACTTTG 58.348 45.455 21.65 14.40 0.00 2.77
7637 9645 4.882671 CAATACTTTGGGAAGTGATCGG 57.117 45.455 2.25 0.00 45.46 4.18
7638 9646 3.560636 ATACTTTGGGAAGTGATCGGG 57.439 47.619 2.25 0.00 45.46 5.14
7639 9647 1.064825 ACTTTGGGAAGTGATCGGGT 58.935 50.000 0.00 0.00 44.27 5.28
7640 9648 1.423921 ACTTTGGGAAGTGATCGGGTT 59.576 47.619 0.00 0.00 44.27 4.11
7641 9649 2.158519 ACTTTGGGAAGTGATCGGGTTT 60.159 45.455 0.00 0.00 44.27 3.27
7642 9650 3.073356 ACTTTGGGAAGTGATCGGGTTTA 59.927 43.478 0.00 0.00 44.27 2.01
7643 9651 3.343941 TTGGGAAGTGATCGGGTTTAG 57.656 47.619 0.00 0.00 0.00 1.85
7644 9652 2.262637 TGGGAAGTGATCGGGTTTAGT 58.737 47.619 0.00 0.00 0.00 2.24
7645 9653 2.235402 TGGGAAGTGATCGGGTTTAGTC 59.765 50.000 0.00 0.00 0.00 2.59
7646 9654 2.419713 GGGAAGTGATCGGGTTTAGTCC 60.420 54.545 0.00 0.00 0.00 3.85
7647 9655 2.235402 GGAAGTGATCGGGTTTAGTCCA 59.765 50.000 0.00 0.00 0.00 4.02
7648 9656 3.118371 GGAAGTGATCGGGTTTAGTCCAT 60.118 47.826 0.00 0.00 0.00 3.41
7649 9657 4.100498 GGAAGTGATCGGGTTTAGTCCATA 59.900 45.833 0.00 0.00 0.00 2.74
7650 9658 5.395990 GGAAGTGATCGGGTTTAGTCCATAA 60.396 44.000 0.00 0.00 0.00 1.90
7651 9659 5.687166 AGTGATCGGGTTTAGTCCATAAA 57.313 39.130 0.00 0.00 0.00 1.40
7662 9670 7.046862 GTTTAGTCCATAAACTCGTGTTCTC 57.953 40.000 2.94 0.00 46.55 2.87
7663 9671 3.834610 AGTCCATAAACTCGTGTTCTCG 58.165 45.455 2.94 0.00 34.96 4.04
7664 9672 3.504906 AGTCCATAAACTCGTGTTCTCGA 59.495 43.478 2.94 0.00 34.96 4.04
7665 9673 4.158025 AGTCCATAAACTCGTGTTCTCGAT 59.842 41.667 2.94 0.00 39.12 3.59
7666 9674 4.499758 GTCCATAAACTCGTGTTCTCGATC 59.500 45.833 2.94 0.00 39.12 3.69
7667 9675 4.157105 TCCATAAACTCGTGTTCTCGATCA 59.843 41.667 2.94 0.00 39.12 2.92
7668 9676 4.862574 CCATAAACTCGTGTTCTCGATCAA 59.137 41.667 2.94 0.00 39.12 2.57
7669 9677 5.004821 CCATAAACTCGTGTTCTCGATCAAG 59.995 44.000 2.94 0.00 39.12 3.02
7670 9678 3.644884 AACTCGTGTTCTCGATCAAGT 57.355 42.857 0.00 0.00 39.12 3.16
7671 9679 4.761235 AACTCGTGTTCTCGATCAAGTA 57.239 40.909 0.00 0.00 39.12 2.24
7672 9680 4.761235 ACTCGTGTTCTCGATCAAGTAA 57.239 40.909 0.00 0.00 39.12 2.24
7673 9681 4.724303 ACTCGTGTTCTCGATCAAGTAAG 58.276 43.478 0.00 0.00 39.12 2.34
7674 9682 4.092771 TCGTGTTCTCGATCAAGTAAGG 57.907 45.455 0.00 0.00 34.85 2.69
7675 9683 2.599082 CGTGTTCTCGATCAAGTAAGGC 59.401 50.000 0.00 0.00 0.00 4.35
7676 9684 2.930682 GTGTTCTCGATCAAGTAAGGCC 59.069 50.000 0.00 0.00 0.00 5.19
7677 9685 2.565391 TGTTCTCGATCAAGTAAGGCCA 59.435 45.455 5.01 0.00 0.00 5.36
7678 9686 3.007506 TGTTCTCGATCAAGTAAGGCCAA 59.992 43.478 5.01 0.00 0.00 4.52
7679 9687 3.973206 TCTCGATCAAGTAAGGCCAAA 57.027 42.857 5.01 0.00 0.00 3.28
7680 9688 4.280436 TCTCGATCAAGTAAGGCCAAAA 57.720 40.909 5.01 0.00 0.00 2.44
7681 9689 4.000988 TCTCGATCAAGTAAGGCCAAAAC 58.999 43.478 5.01 0.00 0.00 2.43
7682 9690 3.078837 TCGATCAAGTAAGGCCAAAACC 58.921 45.455 5.01 0.00 0.00 3.27
7683 9691 2.159572 CGATCAAGTAAGGCCAAAACCG 60.160 50.000 5.01 0.00 33.69 4.44
7684 9692 2.642154 TCAAGTAAGGCCAAAACCGA 57.358 45.000 5.01 0.00 33.69 4.69
7685 9693 2.500229 TCAAGTAAGGCCAAAACCGAG 58.500 47.619 5.01 0.00 33.69 4.63
7686 9694 1.068541 CAAGTAAGGCCAAAACCGAGC 60.069 52.381 5.01 0.00 33.69 5.03
7687 9695 0.953960 AGTAAGGCCAAAACCGAGCG 60.954 55.000 5.01 0.00 33.69 5.03
7688 9696 1.071814 TAAGGCCAAAACCGAGCGT 59.928 52.632 5.01 0.00 33.69 5.07
7689 9697 0.321021 TAAGGCCAAAACCGAGCGTA 59.679 50.000 5.01 0.00 33.69 4.42
7690 9698 1.232621 AAGGCCAAAACCGAGCGTAC 61.233 55.000 5.01 0.00 33.69 3.67
7691 9699 2.683859 GGCCAAAACCGAGCGTACC 61.684 63.158 0.00 0.00 0.00 3.34
7692 9700 1.670083 GCCAAAACCGAGCGTACCT 60.670 57.895 0.00 0.00 0.00 3.08
7693 9701 1.232621 GCCAAAACCGAGCGTACCTT 61.233 55.000 0.00 0.00 0.00 3.50
7694 9702 1.940752 GCCAAAACCGAGCGTACCTTA 60.941 52.381 0.00 0.00 0.00 2.69
7695 9703 2.415776 CCAAAACCGAGCGTACCTTAA 58.584 47.619 0.00 0.00 0.00 1.85
7696 9704 2.807392 CCAAAACCGAGCGTACCTTAAA 59.193 45.455 0.00 0.00 0.00 1.52
7697 9705 3.364267 CCAAAACCGAGCGTACCTTAAAC 60.364 47.826 0.00 0.00 0.00 2.01
7698 9706 2.084610 AACCGAGCGTACCTTAAACC 57.915 50.000 0.00 0.00 0.00 3.27
7699 9707 0.968405 ACCGAGCGTACCTTAAACCA 59.032 50.000 0.00 0.00 0.00 3.67
7700 9708 1.337167 ACCGAGCGTACCTTAAACCAC 60.337 52.381 0.00 0.00 0.00 4.16
7701 9709 1.067354 CCGAGCGTACCTTAAACCACT 60.067 52.381 0.00 0.00 0.00 4.00
7702 9710 2.611224 CCGAGCGTACCTTAAACCACTT 60.611 50.000 0.00 0.00 0.00 3.16
7703 9711 2.410730 CGAGCGTACCTTAAACCACTTG 59.589 50.000 0.00 0.00 0.00 3.16
7704 9712 3.656559 GAGCGTACCTTAAACCACTTGA 58.343 45.455 0.00 0.00 0.00 3.02
7705 9713 4.060205 GAGCGTACCTTAAACCACTTGAA 58.940 43.478 0.00 0.00 0.00 2.69
7706 9714 4.648651 AGCGTACCTTAAACCACTTGAAT 58.351 39.130 0.00 0.00 0.00 2.57
7707 9715 4.454504 AGCGTACCTTAAACCACTTGAATG 59.545 41.667 0.00 0.00 0.00 2.67
7708 9716 4.453136 GCGTACCTTAAACCACTTGAATGA 59.547 41.667 0.00 0.00 0.00 2.57
7709 9717 5.049267 GCGTACCTTAAACCACTTGAATGAA 60.049 40.000 0.00 0.00 0.00 2.57
7710 9718 6.513720 GCGTACCTTAAACCACTTGAATGAAA 60.514 38.462 0.00 0.00 0.00 2.69
7711 9719 7.419204 CGTACCTTAAACCACTTGAATGAAAA 58.581 34.615 0.00 0.00 0.00 2.29
7712 9720 7.377662 CGTACCTTAAACCACTTGAATGAAAAC 59.622 37.037 0.00 0.00 0.00 2.43
7713 9721 7.418337 ACCTTAAACCACTTGAATGAAAACT 57.582 32.000 0.00 0.00 0.00 2.66
7714 9722 7.847096 ACCTTAAACCACTTGAATGAAAACTT 58.153 30.769 0.00 0.00 0.00 2.66
7715 9723 8.973182 ACCTTAAACCACTTGAATGAAAACTTA 58.027 29.630 0.00 0.00 0.00 2.24
7732 9740 9.364989 TGAAAACTTAAAAGAAACAGTCAATGG 57.635 29.630 0.00 0.00 0.00 3.16
7744 9752 2.805671 CAGTCAATGGCTTACGTTCACA 59.194 45.455 0.00 0.00 0.00 3.58
7759 9767 1.186200 TCACAAGGTCATCCTCTCCG 58.814 55.000 0.00 0.00 44.35 4.63
7771 9779 0.109226 CCTCTCCGACGACTCCAAAC 60.109 60.000 0.00 0.00 0.00 2.93
7816 9824 1.215382 CGCCATCCTGACGAACTCA 59.785 57.895 0.00 0.00 0.00 3.41
7825 9833 1.079750 GACGAACTCAGCCTGGTCC 60.080 63.158 0.00 0.00 0.00 4.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 2.281761 CACTCCTTGGCCGTGCTT 60.282 61.111 0.00 0.00 0.00 3.91
182 183 5.353956 CACCACTTCATTTATTCATCGGACA 59.646 40.000 0.00 0.00 0.00 4.02
392 393 0.892814 GGTAGAGGGGATACGACCGG 60.893 65.000 0.00 0.00 37.60 5.28
423 424 1.218316 GGAGATTTGGTCGTCGCCT 59.782 57.895 7.14 0.00 32.37 5.52
431 432 0.984230 TCGCTTGGAGGAGATTTGGT 59.016 50.000 0.00 0.00 0.00 3.67
523 528 1.611851 CCTCCTCACTGCTCACCCT 60.612 63.158 0.00 0.00 0.00 4.34
550 555 2.357760 GCCGGTGCCGACACTTTA 60.358 61.111 12.71 0.00 46.57 1.85
779 805 3.055458 TGGATGCGTTTAGGACAGAATGA 60.055 43.478 0.00 0.00 39.69 2.57
786 812 2.271800 CTGTCTGGATGCGTTTAGGAC 58.728 52.381 0.00 0.00 0.00 3.85
874 904 0.596083 GTCATCGGCTCATCGTCCAG 60.596 60.000 0.00 0.00 0.00 3.86
1438 1484 1.542915 ACAAGGCAATGTGATGTGAGC 59.457 47.619 0.00 0.00 30.82 4.26
1439 1485 3.928727 AACAAGGCAATGTGATGTGAG 57.071 42.857 0.00 0.00 32.81 3.51
1440 1486 3.890756 AGAAACAAGGCAATGTGATGTGA 59.109 39.130 0.00 0.00 32.81 3.58
1441 1487 3.985279 CAGAAACAAGGCAATGTGATGTG 59.015 43.478 0.00 0.00 32.81 3.21
1442 1488 3.890756 TCAGAAACAAGGCAATGTGATGT 59.109 39.130 0.00 0.00 32.81 3.06
1484 1530 3.726517 CGCAAGACAACCCTGCGG 61.727 66.667 7.74 0.00 44.06 5.69
1572 1619 1.292223 CTTGCTTCCGAGGAACCGA 59.708 57.895 0.00 0.00 0.00 4.69
1739 1843 7.279758 AGCTTAATTGATGTCTAGTCTTGCTTC 59.720 37.037 0.00 0.00 0.00 3.86
1740 1844 7.108847 AGCTTAATTGATGTCTAGTCTTGCTT 58.891 34.615 0.00 0.00 0.00 3.91
1793 1897 0.933700 ACCCTACCAAATCCATGGGG 59.066 55.000 13.02 7.62 45.18 4.96
1812 1917 4.824479 TCATCAGCTCCATACAAGACAA 57.176 40.909 0.00 0.00 0.00 3.18
1842 1947 2.672961 TACAAGTTGAGGGCATCGAG 57.327 50.000 10.54 0.00 0.00 4.04
1931 2036 3.134574 TGAGGCCGTGAAACAAAGTAT 57.865 42.857 0.00 0.00 35.74 2.12
1937 2042 1.837439 AGGATATGAGGCCGTGAAACA 59.163 47.619 0.00 0.00 35.74 2.83
1940 2045 1.837439 ACAAGGATATGAGGCCGTGAA 59.163 47.619 0.00 0.00 37.16 3.18
1961 2066 2.899977 CTTACTTGAACCGTGCGAAAC 58.100 47.619 0.00 0.00 0.00 2.78
2067 2176 6.010850 AGGAATGCGAATAGTATCTACAGGA 58.989 40.000 0.00 0.00 0.00 3.86
2100 2209 7.281100 CCTTTTTAAACATTTGCACCTTTACCA 59.719 33.333 0.00 0.00 0.00 3.25
2138 2247 3.819188 GCTGTGGGTAGCATCTGC 58.181 61.111 0.00 0.00 43.17 4.26
2193 2302 1.699083 TGAGAAGCTGTCCAACCATGA 59.301 47.619 0.00 0.00 0.00 3.07
2236 2345 5.254115 ACCAGACCTTTTATGAAAGTAGGC 58.746 41.667 8.94 0.00 40.53 3.93
2248 2357 6.549364 TGTCAAACATGAATACCAGACCTTTT 59.451 34.615 0.00 0.00 0.00 2.27
2262 2371 6.017192 CCATGTCTTTACACTGTCAAACATGA 60.017 38.462 19.72 0.00 43.26 3.07
2272 2381 4.569943 AGCACTACCATGTCTTTACACTG 58.430 43.478 0.00 0.00 38.78 3.66
2276 2385 4.811557 GGATGAGCACTACCATGTCTTTAC 59.188 45.833 0.00 0.00 0.00 2.01
2278 2387 3.679917 CGGATGAGCACTACCATGTCTTT 60.680 47.826 0.00 0.00 0.00 2.52
2282 2391 0.179073 GCGGATGAGCACTACCATGT 60.179 55.000 0.00 0.00 37.05 3.21
2293 2402 3.053455 GGAGTAATTCGAAGCGGATGAG 58.947 50.000 3.35 0.00 0.00 2.90
2300 2409 3.425858 GCGTATCAGGAGTAATTCGAAGC 59.574 47.826 3.35 0.00 0.00 3.86
2307 2416 7.231722 GGATATGATAGGCGTATCAGGAGTAAT 59.768 40.741 27.48 15.30 46.60 1.89
2316 2425 7.971168 GCATACATAGGATATGATAGGCGTATC 59.029 40.741 17.56 17.56 42.36 2.24
2322 2431 7.366513 CGACTGCATACATAGGATATGATAGG 58.633 42.308 3.87 0.00 32.66 2.57
2333 2442 3.551046 GGACTGTCCGACTGCATACATAG 60.551 52.174 11.71 0.00 0.00 2.23
2352 2461 1.971357 TCAGGTCTTGTTGAGAGGGAC 59.029 52.381 0.00 0.00 34.31 4.46
2410 2519 7.827236 TGTAAAATTTGGTAGTATCCTGGAGTG 59.173 37.037 1.52 0.00 0.00 3.51
2439 2548 7.174772 TGCTTGTTAAGAAGATGAAGCAATGTA 59.825 33.333 16.08 0.00 42.00 2.29
2441 2550 6.384224 TGCTTGTTAAGAAGATGAAGCAATG 58.616 36.000 16.08 0.00 42.00 2.82
2975 3094 6.940867 GGATAGAAAGGTAAAACTTGTCCTGT 59.059 38.462 0.00 0.00 0.00 4.00
3087 3206 2.169769 AGGACGTGGAAAGAACAGACAA 59.830 45.455 0.00 0.00 0.00 3.18
3088 3207 1.760613 AGGACGTGGAAAGAACAGACA 59.239 47.619 0.00 0.00 0.00 3.41
3089 3208 2.528041 AGGACGTGGAAAGAACAGAC 57.472 50.000 0.00 0.00 0.00 3.51
3090 3209 3.553828 AAAGGACGTGGAAAGAACAGA 57.446 42.857 0.00 0.00 0.00 3.41
3120 3249 6.492007 AATGCTGAAATTGTACAGTCAGAG 57.508 37.500 25.63 11.27 39.94 3.35
3122 3251 7.365741 AGAAAATGCTGAAATTGTACAGTCAG 58.634 34.615 20.65 20.65 40.40 3.51
3165 3294 5.633830 ACTGAATAACCAAGCATCACAAG 57.366 39.130 0.00 0.00 0.00 3.16
3198 3329 9.946165 ACAAAAGAAAGCTGTAACAAATAGTAC 57.054 29.630 0.00 0.00 0.00 2.73
3210 3341 4.706962 ACTTTCCTCACAAAAGAAAGCTGT 59.293 37.500 10.73 0.00 46.71 4.40
3285 3416 7.581213 ATTGTAGTCCAACTCATCAACAAAA 57.419 32.000 0.00 0.00 35.44 2.44
3320 3451 6.058183 AGCACCAGGAATTTAGTAGCATTAG 58.942 40.000 0.00 0.00 0.00 1.73
3379 3510 4.899502 ACCAAACCTAGAGAAGACATGTG 58.100 43.478 1.15 0.00 0.00 3.21
3380 3511 5.568620 AACCAAACCTAGAGAAGACATGT 57.431 39.130 0.00 0.00 0.00 3.21
3381 3512 6.884280 AAAACCAAACCTAGAGAAGACATG 57.116 37.500 0.00 0.00 0.00 3.21
3399 3530 3.826729 AGTGGAAACCATGAGCTAAAACC 59.173 43.478 0.00 0.00 35.28 3.27
3409 3540 1.815003 GCAAGAGGAGTGGAAACCATG 59.185 52.381 0.00 0.00 35.28 3.66
3413 3544 1.072331 TCCTGCAAGAGGAGTGGAAAC 59.928 52.381 0.00 0.00 46.96 2.78
3443 3574 7.465989 TCGGAACCATTACAAACGAATATTTC 58.534 34.615 0.00 0.00 0.00 2.17
3452 3583 4.517832 AGAACCTTCGGAACCATTACAAAC 59.482 41.667 0.00 0.00 0.00 2.93
3458 3589 3.502123 TTGAGAACCTTCGGAACCATT 57.498 42.857 0.00 0.00 0.00 3.16
3481 3612 7.015064 AGTCAAAACCCTCTTCCTAGTAAGTA 58.985 38.462 0.00 0.00 0.00 2.24
3571 3702 3.758755 TCTCTGACAACTCAGCAATGT 57.241 42.857 0.00 0.00 43.45 2.71
3593 3724 3.375782 GCTTTTGCATCCAACTTCTGT 57.624 42.857 0.00 0.00 46.58 3.41
3699 3832 7.397476 TGGTTGGTAATAAACTCATTTATGGCA 59.603 33.333 0.00 0.00 39.61 4.92
3709 3842 9.716531 AACTACTACTTGGTTGGTAATAAACTC 57.283 33.333 0.00 0.00 0.00 3.01
3714 3847 8.873144 ACAAGAACTACTACTTGGTTGGTAATA 58.127 33.333 0.00 0.00 45.03 0.98
3774 3909 5.948992 AAAGAAGCACTCACCAAGTTATC 57.051 39.130 0.00 0.00 35.45 1.75
3782 3917 5.689383 TCAAACATAAAGAAGCACTCACC 57.311 39.130 0.00 0.00 0.00 4.02
3799 3934 4.441792 ACCTGAATTGCAACCTTTCAAAC 58.558 39.130 13.41 0.00 0.00 2.93
3800 3935 4.751767 ACCTGAATTGCAACCTTTCAAA 57.248 36.364 13.41 0.00 0.00 2.69
3801 3936 4.892934 ACTACCTGAATTGCAACCTTTCAA 59.107 37.500 13.41 1.19 0.00 2.69
3803 3938 5.241728 AGAACTACCTGAATTGCAACCTTTC 59.758 40.000 0.00 2.38 0.00 2.62
3826 3976 1.873591 GACAAGCACAAGGTGGTACAG 59.126 52.381 1.11 0.00 43.73 2.74
3828 3978 2.256117 AGACAAGCACAAGGTGGTAC 57.744 50.000 1.11 0.00 43.73 3.34
3834 3984 6.127925 TGCATTATTCTTAGACAAGCACAAGG 60.128 38.462 0.00 0.00 0.00 3.61
3884 4035 9.090103 CCCTATATACTGTAGAACATCCTTCAA 57.910 37.037 0.00 0.00 0.00 2.69
3893 4044 8.293157 GTCGGTAAACCCTATATACTGTAGAAC 58.707 40.741 0.00 0.00 0.00 3.01
3898 4049 7.607615 ATTGTCGGTAAACCCTATATACTGT 57.392 36.000 0.00 0.00 0.00 3.55
3899 4050 8.770828 CAAATTGTCGGTAAACCCTATATACTG 58.229 37.037 0.00 0.00 0.00 2.74
3908 4061 2.885894 TGTCCAAATTGTCGGTAAACCC 59.114 45.455 0.00 0.00 0.00 4.11
3933 4086 6.542370 GGCCAGTAAGCTCAAACTGAATAATA 59.458 38.462 19.87 0.00 44.79 0.98
3936 4089 4.261801 GGCCAGTAAGCTCAAACTGAATA 58.738 43.478 19.87 0.00 44.79 1.75
3939 4092 1.419762 TGGCCAGTAAGCTCAAACTGA 59.580 47.619 19.87 3.53 44.79 3.41
3941 4094 2.230660 GTTGGCCAGTAAGCTCAAACT 58.769 47.619 5.11 0.00 0.00 2.66
3974 4127 6.842163 ACCTTGTTATCGAAGCAAATAACAG 58.158 36.000 7.02 1.45 44.66 3.16
3983 4136 6.093633 ACCTTTATTGACCTTGTTATCGAAGC 59.906 38.462 0.00 0.00 0.00 3.86
4011 4164 5.204292 AGGAGCTGTACTAATGATGACTCA 58.796 41.667 0.00 0.00 35.41 3.41
4015 4168 6.544928 TTCAAGGAGCTGTACTAATGATGA 57.455 37.500 0.00 0.00 0.00 2.92
4026 4179 0.475906 AGCCTGTTTCAAGGAGCTGT 59.524 50.000 0.00 0.00 40.02 4.40
4125 4278 5.123820 GGAGTCATTTACTTGTAGCATGCAA 59.876 40.000 21.98 4.46 39.07 4.08
4138 4291 7.265673 TGCTCATTACTGTAGGAGTCATTTAC 58.734 38.462 15.48 0.00 35.96 2.01
4139 4292 7.342026 TCTGCTCATTACTGTAGGAGTCATTTA 59.658 37.037 15.48 5.48 35.96 1.40
4140 4293 6.155221 TCTGCTCATTACTGTAGGAGTCATTT 59.845 38.462 15.48 0.00 35.96 2.32
4143 4296 4.399618 GTCTGCTCATTACTGTAGGAGTCA 59.600 45.833 15.48 13.19 35.96 3.41
4144 4297 4.399618 TGTCTGCTCATTACTGTAGGAGTC 59.600 45.833 15.48 10.60 35.96 3.36
4145 4298 4.344978 TGTCTGCTCATTACTGTAGGAGT 58.655 43.478 15.48 0.00 38.88 3.85
4148 4303 9.935241 AATATATTGTCTGCTCATTACTGTAGG 57.065 33.333 0.00 0.00 0.00 3.18
4196 4391 1.264288 GTGCACAACCTCCTTTCGAAG 59.736 52.381 13.17 0.00 0.00 3.79
4197 4392 1.305201 GTGCACAACCTCCTTTCGAA 58.695 50.000 13.17 0.00 0.00 3.71
4198 4393 0.179234 TGTGCACAACCTCCTTTCGA 59.821 50.000 19.28 0.00 0.00 3.71
4199 4394 0.307760 GTGTGCACAACCTCCTTTCG 59.692 55.000 23.59 0.00 0.00 3.46
4200 4395 0.307760 CGTGTGCACAACCTCCTTTC 59.692 55.000 23.59 4.56 0.00 2.62
4219 4439 8.682710 TGTGATAAACTACAGAATAAAATGGCC 58.317 33.333 0.00 0.00 0.00 5.36
4231 4451 9.973246 GTTTGTGTCATATGTGATAAACTACAG 57.027 33.333 15.81 0.00 36.60 2.74
4263 4483 7.435488 TCATCGAGCAAACTAAACTATAAGCTC 59.565 37.037 0.00 0.00 42.67 4.09
4264 4484 7.265673 TCATCGAGCAAACTAAACTATAAGCT 58.734 34.615 0.00 0.00 0.00 3.74
4310 4530 4.631377 CAGCTCGACAAATATTTCACCAGA 59.369 41.667 0.00 0.00 0.00 3.86
4453 4673 7.843490 TTCTATCAAATCGTAAACAAGGGAG 57.157 36.000 0.00 0.00 0.00 4.30
4510 4730 4.764050 ACATATTACCATTGTCACCCGA 57.236 40.909 0.00 0.00 0.00 5.14
4513 4733 6.393990 TGCAAAACATATTACCATTGTCACC 58.606 36.000 0.00 0.00 0.00 4.02
4534 4754 9.013229 ACTGATAAAGAAAACACATATTCTGCA 57.987 29.630 0.00 0.00 36.09 4.41
4535 4755 9.282247 CACTGATAAAGAAAACACATATTCTGC 57.718 33.333 0.00 0.00 36.09 4.26
4536 4756 9.778993 CCACTGATAAAGAAAACACATATTCTG 57.221 33.333 0.00 0.00 36.09 3.02
4546 4767 5.705609 TTGAGCCCACTGATAAAGAAAAC 57.294 39.130 0.00 0.00 0.00 2.43
4556 4777 6.437162 AGCTTAAAATTAATTGAGCCCACTGA 59.563 34.615 19.62 0.00 33.64 3.41
4581 4802 6.012333 ACACAATGGTCCAAGGGTAGTATAAA 60.012 38.462 0.00 0.00 0.00 1.40
4582 4803 5.489637 ACACAATGGTCCAAGGGTAGTATAA 59.510 40.000 0.00 0.00 0.00 0.98
4583 4804 5.034200 ACACAATGGTCCAAGGGTAGTATA 58.966 41.667 0.00 0.00 0.00 1.47
4584 4805 3.850173 ACACAATGGTCCAAGGGTAGTAT 59.150 43.478 0.00 0.00 0.00 2.12
4638 4859 4.213270 TGTGGACAACGAATCTGAAACATC 59.787 41.667 0.00 0.00 0.00 3.06
4641 4862 3.311322 TGTGTGGACAACGAATCTGAAAC 59.689 43.478 0.00 0.00 0.00 2.78
4671 4895 1.071385 CAAGCGATAATGGGAGAGGCT 59.929 52.381 0.00 0.00 0.00 4.58
4678 4902 5.551233 TCTCTTTATCCAAGCGATAATGGG 58.449 41.667 0.00 0.00 41.92 4.00
4685 4910 3.199946 ACCCATTCTCTTTATCCAAGCGA 59.800 43.478 0.00 0.00 31.70 4.93
4687 4912 6.772716 TCATAACCCATTCTCTTTATCCAAGC 59.227 38.462 0.00 0.00 31.70 4.01
4722 4947 3.448301 GGGAAATCACAGCATCCAAATGA 59.552 43.478 0.00 0.00 34.61 2.57
4728 4953 1.106285 GGTGGGAAATCACAGCATCC 58.894 55.000 9.84 0.00 46.28 3.51
4742 4967 6.765512 ACAAATTACAAACATCTTTTGGTGGG 59.234 34.615 2.08 0.00 33.92 4.61
4780 5017 8.822805 TCCTCTAAGTCCTAAAATAGCAAAGAA 58.177 33.333 0.00 0.00 0.00 2.52
4858 5095 0.413832 AGAGAAGGCCACTCACCCTA 59.586 55.000 24.73 0.00 36.91 3.53
4868 5105 3.704061 ACTGAATCTACAGAGAGAAGGCC 59.296 47.826 0.00 0.00 40.63 5.19
4894 5133 6.919775 AGGGATATCAGACCAACTGTATAC 57.080 41.667 4.83 0.00 45.86 1.47
4936 5198 5.217978 ACAGCACCAATGTGAAATGAATT 57.782 34.783 0.00 0.00 45.76 2.17
4985 5247 7.520451 AGACCAAATTTTTCCAAGTACCTAC 57.480 36.000 0.00 0.00 0.00 3.18
5098 5360 3.008813 ACCAGTTCAGCATCTTCACATCT 59.991 43.478 0.00 0.00 0.00 2.90
5100 5362 3.430042 ACCAGTTCAGCATCTTCACAT 57.570 42.857 0.00 0.00 0.00 3.21
5104 5366 6.500684 TTATCAAACCAGTTCAGCATCTTC 57.499 37.500 0.00 0.00 0.00 2.87
5110 5372 7.538575 ACACATATTTATCAAACCAGTTCAGC 58.461 34.615 0.00 0.00 0.00 4.26
5158 5420 6.857964 ACAAATCGCAATCAAAACAGACTAAG 59.142 34.615 0.00 0.00 0.00 2.18
5164 5426 6.515043 AGAAACAAATCGCAATCAAAACAG 57.485 33.333 0.00 0.00 0.00 3.16
5177 5439 9.750125 ACAAATAAACCTCTGAAGAAACAAATC 57.250 29.630 0.00 0.00 0.00 2.17
5198 5460 9.185680 GTCCTATCAATTACAAAGGGTACAAAT 57.814 33.333 0.00 0.00 0.00 2.32
5202 5464 7.201705 GCAAGTCCTATCAATTACAAAGGGTAC 60.202 40.741 0.00 0.00 0.00 3.34
5274 5540 6.312426 CAGACAGAAGCTTCCTAACAACATAG 59.688 42.308 22.81 1.83 0.00 2.23
5360 5632 8.273605 TGGTATATAATCATGCATGCCATTCTA 58.726 33.333 22.25 13.59 29.55 2.10
5435 5708 9.533253 ACGTGTTTAAAAGACTAACTTTAGCTA 57.467 29.630 0.00 0.00 46.55 3.32
5460 5733 2.588620 AGAGGAGTCGGATGATGGTAC 58.411 52.381 0.00 0.00 0.00 3.34
5463 5736 1.342819 GGAAGAGGAGTCGGATGATGG 59.657 57.143 0.00 0.00 0.00 3.51
5491 5764 6.038603 TGCTGCCTATTAGCTGAAAACTAATG 59.961 38.462 0.00 0.00 39.90 1.90
5493 5766 5.354234 GTGCTGCCTATTAGCTGAAAACTAA 59.646 40.000 0.00 0.00 41.66 2.24
5514 5787 9.390795 CAAATATGAAAGTATATTGCTGAGTGC 57.609 33.333 0.00 0.00 43.25 4.40
5606 7149 3.169908 TGTGGGTCATGTTACTAGCTCA 58.830 45.455 0.00 0.00 0.00 4.26
5670 7497 5.629600 TCGAAAGAGGAACTAGGGAGTCTAG 60.630 48.000 0.00 0.00 41.55 2.43
5671 7498 4.226846 TCGAAAGAGGAACTAGGGAGTCTA 59.773 45.833 0.00 0.00 41.55 2.59
5672 7499 3.010361 TCGAAAGAGGAACTAGGGAGTCT 59.990 47.826 0.00 0.00 41.55 3.24
5673 7500 3.354467 TCGAAAGAGGAACTAGGGAGTC 58.646 50.000 0.00 0.00 41.55 3.36
5674 7501 3.453059 TCGAAAGAGGAACTAGGGAGT 57.547 47.619 0.00 0.00 41.55 3.85
5737 7568 3.687212 TGTTTCCATGCCGTACAATACAG 59.313 43.478 0.00 0.00 0.00 2.74
5772 7603 1.940613 GTTATGGAGCCACGGAACATC 59.059 52.381 0.00 0.00 0.00 3.06
5816 7681 3.559655 TGTTACATATGATTGGCGTCAGC 59.440 43.478 10.38 0.00 44.18 4.26
5855 7725 3.381590 GTGCCACTGGAACTCTTTTCTTT 59.618 43.478 0.00 0.00 0.00 2.52
5859 7729 2.435372 TGTGCCACTGGAACTCTTTT 57.565 45.000 7.77 0.00 31.04 2.27
5901 7771 2.620585 GGAAATCTACCTTGCTGATGCC 59.379 50.000 0.00 0.00 38.71 4.40
6051 7922 3.891056 AATGTCAGCACGCATATCATG 57.109 42.857 0.00 0.00 0.00 3.07
6052 7923 5.936372 AGAATAATGTCAGCACGCATATCAT 59.064 36.000 0.00 0.00 0.00 2.45
6053 7924 5.299949 AGAATAATGTCAGCACGCATATCA 58.700 37.500 0.00 0.00 0.00 2.15
6144 8019 2.816087 GCTGATCTCTGCAAGGTTTGAA 59.184 45.455 4.41 0.00 40.06 2.69
6165 8040 1.586564 GTCGAGGGAAGATGCGTCG 60.587 63.158 7.49 7.49 45.15 5.12
6189 8064 1.648467 GCATCGCCCTTTCTGGTGTC 61.648 60.000 0.00 0.00 37.20 3.67
6304 8179 1.278238 AGAAGCGTCCGAAAATAGCG 58.722 50.000 0.00 0.00 0.00 4.26
6318 8193 3.376546 CCAGCTGATTCAGGTTAAGAAGC 59.623 47.826 17.39 0.00 40.40 3.86
6369 8244 0.037790 AGCTCAAGACTCGGTTCAGC 60.038 55.000 0.00 0.00 0.00 4.26
6376 8251 2.474359 CACAAAGTGAGCTCAAGACTCG 59.526 50.000 20.19 9.00 36.94 4.18
6519 8394 2.238847 CTGGATCGTTTCAGCCCGGA 62.239 60.000 0.73 0.00 0.00 5.14
6524 8399 0.036388 TGTCCCTGGATCGTTTCAGC 60.036 55.000 0.00 0.00 0.00 4.26
6543 8418 1.003355 CAAGGTCGTCACCCATGCT 60.003 57.895 0.00 0.00 45.12 3.79
6560 8435 0.251297 CTTTGGACAGGGACATGCCA 60.251 55.000 8.20 0.00 38.95 4.92
6596 8471 1.068125 TCCTGTAACGACGACACCATG 60.068 52.381 0.00 0.00 0.00 3.66
6597 8472 1.201647 CTCCTGTAACGACGACACCAT 59.798 52.381 0.00 0.00 0.00 3.55
6665 8540 0.567182 ATGGCTCCTCCCTGAGATCT 59.433 55.000 0.00 0.00 34.11 2.75
6684 8559 1.607178 CCACCTTGGCCATCAGCAA 60.607 57.895 6.09 0.00 46.50 3.91
6828 8709 6.310467 TGCTCATTTACAAACTCTTAGCTACG 59.690 38.462 0.00 0.00 0.00 3.51
6830 8711 6.310467 CGTGCTCATTTACAAACTCTTAGCTA 59.690 38.462 0.00 0.00 0.00 3.32
6860 8741 8.882736 TCTACATGATTATACTGCACAAAAGTG 58.117 33.333 0.00 0.00 0.00 3.16
6931 8812 5.924254 GCACGTAGCACTAAATATGGATGTA 59.076 40.000 5.30 0.00 44.79 2.29
6933 8814 5.269459 GCACGTAGCACTAAATATGGATG 57.731 43.478 5.30 0.00 44.79 3.51
6947 8828 5.338365 ACTACTAGTAATGTTGCACGTAGC 58.662 41.667 3.76 0.00 45.96 3.58
6948 8829 7.639072 CAGTACTACTAGTAATGTTGCACGTAG 59.361 40.741 13.35 0.00 40.66 3.51
6949 8830 7.466805 CAGTACTACTAGTAATGTTGCACGTA 58.533 38.462 13.35 0.00 40.66 3.57
6974 8884 5.531287 CCAGCCTTCAACCCTTAACATATAC 59.469 44.000 0.00 0.00 0.00 1.47
6976 8886 4.536765 CCAGCCTTCAACCCTTAACATAT 58.463 43.478 0.00 0.00 0.00 1.78
7013 8923 1.965754 CTACAGAGCTGTGAGGGGGC 61.966 65.000 19.13 0.00 44.63 5.80
7227 9137 4.473520 ATCTTCCCCGGCGCAGTG 62.474 66.667 10.83 0.00 0.00 3.66
7251 9161 1.670406 CTGCTGCAGGGACACTCAC 60.670 63.158 21.71 0.00 0.00 3.51
7323 9233 7.441017 CATCTGAAGCTAAGGTTTATAGAGCT 58.559 38.462 0.00 0.00 45.23 4.09
7324 9234 6.648725 CCATCTGAAGCTAAGGTTTATAGAGC 59.351 42.308 0.00 0.00 0.00 4.09
7325 9235 7.731054 ACCATCTGAAGCTAAGGTTTATAGAG 58.269 38.462 0.00 0.00 0.00 2.43
7326 9236 7.676683 ACCATCTGAAGCTAAGGTTTATAGA 57.323 36.000 0.00 0.00 0.00 1.98
7327 9237 7.254932 GCAACCATCTGAAGCTAAGGTTTATAG 60.255 40.741 0.00 0.00 37.26 1.31
7385 9296 7.041848 TGGACATTCAATGATATTAAGAGCGTG 60.042 37.037 3.79 0.00 0.00 5.34
7392 9303 7.040892 GCTGCTCTGGACATTCAATGATATTAA 60.041 37.037 3.79 0.00 0.00 1.40
7394 9305 5.241064 GCTGCTCTGGACATTCAATGATATT 59.759 40.000 3.79 0.00 0.00 1.28
7400 9311 2.366533 CAGCTGCTCTGGACATTCAAT 58.633 47.619 0.00 0.00 39.15 2.57
7402 9313 0.675837 GCAGCTGCTCTGGACATTCA 60.676 55.000 31.33 0.00 43.06 2.57
7423 9334 1.962807 CATTTGCACCCCTTCTGAACA 59.037 47.619 0.00 0.00 0.00 3.18
7424 9335 1.963515 ACATTTGCACCCCTTCTGAAC 59.036 47.619 0.00 0.00 0.00 3.18
7432 9343 0.808755 CTAACCGACATTTGCACCCC 59.191 55.000 0.00 0.00 0.00 4.95
7434 9345 0.808755 CCCTAACCGACATTTGCACC 59.191 55.000 0.00 0.00 0.00 5.01
7435 9346 1.816074 TCCCTAACCGACATTTGCAC 58.184 50.000 0.00 0.00 0.00 4.57
7437 9348 2.479560 GCATTCCCTAACCGACATTTGC 60.480 50.000 0.00 0.00 0.00 3.68
7438 9349 2.752354 TGCATTCCCTAACCGACATTTG 59.248 45.455 0.00 0.00 0.00 2.32
7439 9350 3.080300 TGCATTCCCTAACCGACATTT 57.920 42.857 0.00 0.00 0.00 2.32
7440 9351 2.799126 TGCATTCCCTAACCGACATT 57.201 45.000 0.00 0.00 0.00 2.71
7443 9354 2.325583 TCATGCATTCCCTAACCGAC 57.674 50.000 0.00 0.00 0.00 4.79
7445 9356 2.951642 ACAATCATGCATTCCCTAACCG 59.048 45.455 0.00 0.00 0.00 4.44
7446 9357 3.068590 CCACAATCATGCATTCCCTAACC 59.931 47.826 0.00 0.00 0.00 2.85
7447 9358 3.701040 ACCACAATCATGCATTCCCTAAC 59.299 43.478 0.00 0.00 0.00 2.34
7448 9359 3.979911 ACCACAATCATGCATTCCCTAA 58.020 40.909 0.00 0.00 0.00 2.69
7449 9360 3.668141 ACCACAATCATGCATTCCCTA 57.332 42.857 0.00 0.00 0.00 3.53
7451 9362 2.896168 CAACCACAATCATGCATTCCC 58.104 47.619 0.00 0.00 0.00 3.97
7453 9364 2.962125 TGCAACCACAATCATGCATTC 58.038 42.857 0.00 0.00 43.32 2.67
7457 9368 3.241067 AGAATGCAACCACAATCATGC 57.759 42.857 0.00 0.00 39.22 4.06
7458 9369 4.811908 TCAAGAATGCAACCACAATCATG 58.188 39.130 0.00 0.00 0.00 3.07
7462 9408 5.479375 AGAGATTCAAGAATGCAACCACAAT 59.521 36.000 0.00 0.00 0.00 2.71
7463 9409 4.828939 AGAGATTCAAGAATGCAACCACAA 59.171 37.500 0.00 0.00 0.00 3.33
7466 9412 5.122239 CGTTAGAGATTCAAGAATGCAACCA 59.878 40.000 0.00 0.00 0.00 3.67
7478 9424 8.070034 TGTATCCTAAAACCGTTAGAGATTCA 57.930 34.615 0.00 0.00 0.00 2.57
7481 9427 8.701895 TGAATGTATCCTAAAACCGTTAGAGAT 58.298 33.333 0.00 0.00 0.00 2.75
7482 9428 8.070034 TGAATGTATCCTAAAACCGTTAGAGA 57.930 34.615 0.00 0.00 0.00 3.10
7483 9429 8.888579 ATGAATGTATCCTAAAACCGTTAGAG 57.111 34.615 0.00 0.00 0.00 2.43
7484 9430 8.479689 TGATGAATGTATCCTAAAACCGTTAGA 58.520 33.333 0.00 0.00 0.00 2.10
7485 9431 8.657074 TGATGAATGTATCCTAAAACCGTTAG 57.343 34.615 0.00 0.00 0.00 2.34
7490 9436 9.342308 TCAAGATGATGAATGTATCCTAAAACC 57.658 33.333 0.00 0.00 0.00 3.27
7496 9442 9.722184 CAACTATCAAGATGATGAATGTATCCT 57.278 33.333 3.17 0.00 37.70 3.24
7497 9443 9.716531 TCAACTATCAAGATGATGAATGTATCC 57.283 33.333 3.17 0.00 37.70 2.59
7511 9457 8.988060 TCTTGGGTTATGTATCAACTATCAAGA 58.012 33.333 0.00 0.00 36.42 3.02
7512 9458 9.613428 TTCTTGGGTTATGTATCAACTATCAAG 57.387 33.333 0.00 0.00 34.18 3.02
7529 9475 8.470002 GCATCTAAACATTTCTATTCTTGGGTT 58.530 33.333 0.00 0.00 0.00 4.11
7530 9476 7.615365 TGCATCTAAACATTTCTATTCTTGGGT 59.385 33.333 0.00 0.00 0.00 4.51
7531 9477 7.999679 TGCATCTAAACATTTCTATTCTTGGG 58.000 34.615 0.00 0.00 0.00 4.12
7532 9478 9.512435 CTTGCATCTAAACATTTCTATTCTTGG 57.488 33.333 0.00 0.00 0.00 3.61
7539 9485 7.446931 TCCAACACTTGCATCTAAACATTTCTA 59.553 33.333 0.00 0.00 0.00 2.10
7542 9550 6.403866 TCCAACACTTGCATCTAAACATTT 57.596 33.333 0.00 0.00 0.00 2.32
7551 9559 5.119588 CACATTTCATTCCAACACTTGCATC 59.880 40.000 0.00 0.00 0.00 3.91
7552 9560 4.992319 CACATTTCATTCCAACACTTGCAT 59.008 37.500 0.00 0.00 0.00 3.96
7558 9566 5.406175 CCAATGACACATTTCATTCCAACAC 59.594 40.000 0.00 0.00 43.08 3.32
7560 9568 5.540911 ACCAATGACACATTTCATTCCAAC 58.459 37.500 0.00 0.00 43.08 3.77
7561 9569 5.279406 GGACCAATGACACATTTCATTCCAA 60.279 40.000 0.00 0.00 43.08 3.53
7562 9570 4.220382 GGACCAATGACACATTTCATTCCA 59.780 41.667 0.00 0.00 43.08 3.53
7564 9572 4.082787 ACGGACCAATGACACATTTCATTC 60.083 41.667 0.00 0.00 43.08 2.67
7567 9575 2.857483 ACGGACCAATGACACATTTCA 58.143 42.857 0.00 0.00 0.00 2.69
7568 9576 3.915437 AACGGACCAATGACACATTTC 57.085 42.857 0.00 0.00 0.00 2.17
7569 9577 4.825085 AGTTAACGGACCAATGACACATTT 59.175 37.500 0.00 0.00 0.00 2.32
7571 9579 4.000988 GAGTTAACGGACCAATGACACAT 58.999 43.478 0.00 0.00 0.00 3.21
7572 9580 3.181464 TGAGTTAACGGACCAATGACACA 60.181 43.478 0.00 0.00 0.00 3.72
7574 9582 3.755112 TGAGTTAACGGACCAATGACA 57.245 42.857 0.00 0.00 0.00 3.58
7578 9586 7.544217 GCAATTAATTTGAGTTAACGGACCAAT 59.456 33.333 0.00 0.00 37.53 3.16
7579 9587 6.864165 GCAATTAATTTGAGTTAACGGACCAA 59.136 34.615 0.00 1.37 37.53 3.67
7580 9588 6.016192 TGCAATTAATTTGAGTTAACGGACCA 60.016 34.615 0.00 0.00 37.53 4.02
7581 9589 6.307077 GTGCAATTAATTTGAGTTAACGGACC 59.693 38.462 0.00 0.00 37.53 4.46
7582 9590 6.858993 TGTGCAATTAATTTGAGTTAACGGAC 59.141 34.615 0.00 0.00 37.53 4.79
7583 9591 6.858993 GTGTGCAATTAATTTGAGTTAACGGA 59.141 34.615 0.00 0.00 37.53 4.69
7584 9592 6.861055 AGTGTGCAATTAATTTGAGTTAACGG 59.139 34.615 0.00 0.00 37.53 4.44
7585 9593 7.851822 AGTGTGCAATTAATTTGAGTTAACG 57.148 32.000 0.00 0.00 37.53 3.18
7586 9594 9.848172 CAAAGTGTGCAATTAATTTGAGTTAAC 57.152 29.630 11.88 0.00 37.53 2.01
7587 9595 9.039870 CCAAAGTGTGCAATTAATTTGAGTTAA 57.960 29.630 16.46 0.00 37.53 2.01
7588 9596 7.655328 CCCAAAGTGTGCAATTAATTTGAGTTA 59.345 33.333 16.46 0.00 37.53 2.24
7589 9597 6.482973 CCCAAAGTGTGCAATTAATTTGAGTT 59.517 34.615 16.46 0.00 37.53 3.01
7590 9598 5.990996 CCCAAAGTGTGCAATTAATTTGAGT 59.009 36.000 16.46 0.00 37.53 3.41
7591 9599 5.106987 GCCCAAAGTGTGCAATTAATTTGAG 60.107 40.000 16.46 8.38 37.53 3.02
7592 9600 4.754114 GCCCAAAGTGTGCAATTAATTTGA 59.246 37.500 16.46 0.00 37.53 2.69
7593 9601 4.083377 GGCCCAAAGTGTGCAATTAATTTG 60.083 41.667 0.00 10.84 38.43 2.32
7594 9602 4.071423 GGCCCAAAGTGTGCAATTAATTT 58.929 39.130 0.00 0.00 0.00 1.82
7595 9603 3.072184 TGGCCCAAAGTGTGCAATTAATT 59.928 39.130 0.00 0.00 0.00 1.40
7596 9604 2.636893 TGGCCCAAAGTGTGCAATTAAT 59.363 40.909 0.00 0.00 0.00 1.40
7597 9605 2.042464 TGGCCCAAAGTGTGCAATTAA 58.958 42.857 0.00 0.00 0.00 1.40
7598 9606 1.709578 TGGCCCAAAGTGTGCAATTA 58.290 45.000 0.00 0.00 0.00 1.40
7599 9607 0.835941 TTGGCCCAAAGTGTGCAATT 59.164 45.000 0.00 0.00 0.00 2.32
7600 9608 1.058284 ATTGGCCCAAAGTGTGCAAT 58.942 45.000 0.00 0.00 0.00 3.56
7601 9609 1.342819 GTATTGGCCCAAAGTGTGCAA 59.657 47.619 0.00 0.00 0.00 4.08
7602 9610 0.965439 GTATTGGCCCAAAGTGTGCA 59.035 50.000 0.00 0.00 0.00 4.57
7603 9611 1.256812 AGTATTGGCCCAAAGTGTGC 58.743 50.000 0.00 0.00 0.00 4.57
7604 9612 3.652274 CAAAGTATTGGCCCAAAGTGTG 58.348 45.455 0.00 0.00 32.69 3.82
7616 9624 3.627577 CCCGATCACTTCCCAAAGTATTG 59.372 47.826 0.00 0.00 43.99 1.90
7617 9625 3.265995 ACCCGATCACTTCCCAAAGTATT 59.734 43.478 0.00 0.00 43.99 1.89
7618 9626 2.844348 ACCCGATCACTTCCCAAAGTAT 59.156 45.455 0.00 0.00 43.99 2.12
7619 9627 2.262637 ACCCGATCACTTCCCAAAGTA 58.737 47.619 0.00 0.00 43.99 2.24
7620 9628 1.064825 ACCCGATCACTTCCCAAAGT 58.935 50.000 0.00 0.00 46.80 2.66
7621 9629 2.200373 AACCCGATCACTTCCCAAAG 57.800 50.000 0.00 0.00 38.54 2.77
7622 9630 2.668144 AAACCCGATCACTTCCCAAA 57.332 45.000 0.00 0.00 0.00 3.28
7623 9631 2.640826 ACTAAACCCGATCACTTCCCAA 59.359 45.455 0.00 0.00 0.00 4.12
7624 9632 2.235402 GACTAAACCCGATCACTTCCCA 59.765 50.000 0.00 0.00 0.00 4.37
7625 9633 2.419713 GGACTAAACCCGATCACTTCCC 60.420 54.545 0.00 0.00 0.00 3.97
7626 9634 2.235402 TGGACTAAACCCGATCACTTCC 59.765 50.000 0.00 0.00 0.00 3.46
7627 9635 3.604875 TGGACTAAACCCGATCACTTC 57.395 47.619 0.00 0.00 0.00 3.01
7628 9636 5.687166 TTATGGACTAAACCCGATCACTT 57.313 39.130 0.00 0.00 0.00 3.16
7629 9637 5.189145 AGTTTATGGACTAAACCCGATCACT 59.811 40.000 4.66 0.00 46.98 3.41
7630 9638 5.425630 AGTTTATGGACTAAACCCGATCAC 58.574 41.667 4.66 0.00 46.98 3.06
7631 9639 5.667466 GAGTTTATGGACTAAACCCGATCA 58.333 41.667 4.66 0.00 46.98 2.92
7636 9644 4.572909 ACACGAGTTTATGGACTAAACCC 58.427 43.478 0.00 0.00 46.98 4.11
7637 9645 5.930569 AGAACACGAGTTTATGGACTAAACC 59.069 40.000 0.00 0.00 46.98 3.27
7638 9646 6.183359 CGAGAACACGAGTTTATGGACTAAAC 60.183 42.308 0.00 0.67 46.41 2.01
7639 9647 5.860182 CGAGAACACGAGTTTATGGACTAAA 59.140 40.000 0.00 0.00 38.30 1.85
7640 9648 5.181811 TCGAGAACACGAGTTTATGGACTAA 59.818 40.000 0.00 0.00 38.30 2.24
7641 9649 4.696877 TCGAGAACACGAGTTTATGGACTA 59.303 41.667 0.00 0.00 38.30 2.59
7642 9650 3.504906 TCGAGAACACGAGTTTATGGACT 59.495 43.478 0.00 0.00 38.30 3.85
7643 9651 3.829948 TCGAGAACACGAGTTTATGGAC 58.170 45.455 0.00 0.00 38.30 4.02
7644 9652 4.157105 TGATCGAGAACACGAGTTTATGGA 59.843 41.667 0.00 0.00 45.22 3.41
7645 9653 4.421058 TGATCGAGAACACGAGTTTATGG 58.579 43.478 0.00 0.00 45.22 2.74
7646 9654 5.573282 ACTTGATCGAGAACACGAGTTTATG 59.427 40.000 17.27 0.00 45.22 1.90
7647 9655 5.710984 ACTTGATCGAGAACACGAGTTTAT 58.289 37.500 17.27 0.00 45.22 1.40
7648 9656 5.117355 ACTTGATCGAGAACACGAGTTTA 57.883 39.130 17.27 0.00 45.22 2.01
7649 9657 3.978687 ACTTGATCGAGAACACGAGTTT 58.021 40.909 17.27 0.00 45.22 2.66
7650 9658 3.644884 ACTTGATCGAGAACACGAGTT 57.355 42.857 17.27 0.00 45.22 3.01
7651 9659 4.379603 CCTTACTTGATCGAGAACACGAGT 60.380 45.833 17.27 0.00 45.22 4.18
7652 9660 4.099120 CCTTACTTGATCGAGAACACGAG 58.901 47.826 17.27 4.92 45.22 4.18
7653 9661 3.672511 GCCTTACTTGATCGAGAACACGA 60.673 47.826 17.27 0.00 46.04 4.35
7654 9662 2.599082 GCCTTACTTGATCGAGAACACG 59.401 50.000 17.27 1.40 0.00 4.49
7655 9663 2.930682 GGCCTTACTTGATCGAGAACAC 59.069 50.000 17.27 2.16 0.00 3.32
7656 9664 2.565391 TGGCCTTACTTGATCGAGAACA 59.435 45.455 17.27 3.50 0.00 3.18
7657 9665 3.247006 TGGCCTTACTTGATCGAGAAC 57.753 47.619 17.27 1.16 0.00 3.01
7658 9666 3.973206 TTGGCCTTACTTGATCGAGAA 57.027 42.857 17.27 5.93 0.00 2.87
7659 9667 3.973206 TTTGGCCTTACTTGATCGAGA 57.027 42.857 17.27 0.00 0.00 4.04
7660 9668 3.127030 GGTTTTGGCCTTACTTGATCGAG 59.873 47.826 8.54 8.54 0.00 4.04
7661 9669 3.078837 GGTTTTGGCCTTACTTGATCGA 58.921 45.455 3.32 0.00 0.00 3.59
7662 9670 2.159572 CGGTTTTGGCCTTACTTGATCG 60.160 50.000 3.32 0.00 0.00 3.69
7663 9671 3.078837 TCGGTTTTGGCCTTACTTGATC 58.921 45.455 3.32 0.00 0.00 2.92
7664 9672 3.081804 CTCGGTTTTGGCCTTACTTGAT 58.918 45.455 3.32 0.00 0.00 2.57
7665 9673 2.500229 CTCGGTTTTGGCCTTACTTGA 58.500 47.619 3.32 1.72 0.00 3.02
7666 9674 1.068541 GCTCGGTTTTGGCCTTACTTG 60.069 52.381 3.32 0.00 0.00 3.16
7667 9675 1.244816 GCTCGGTTTTGGCCTTACTT 58.755 50.000 3.32 0.00 0.00 2.24
7668 9676 0.953960 CGCTCGGTTTTGGCCTTACT 60.954 55.000 3.32 0.00 0.00 2.24
7669 9677 1.232621 ACGCTCGGTTTTGGCCTTAC 61.233 55.000 3.32 0.00 0.00 2.34
7670 9678 0.321021 TACGCTCGGTTTTGGCCTTA 59.679 50.000 3.32 0.00 0.00 2.69
7671 9679 1.071814 TACGCTCGGTTTTGGCCTT 59.928 52.632 3.32 0.00 0.00 4.35
7672 9680 1.670083 GTACGCTCGGTTTTGGCCT 60.670 57.895 3.32 0.00 0.00 5.19
7673 9681 2.683859 GGTACGCTCGGTTTTGGCC 61.684 63.158 0.00 0.00 0.00 5.36
7674 9682 1.232621 AAGGTACGCTCGGTTTTGGC 61.233 55.000 0.00 0.00 0.00 4.52
7675 9683 2.083167 TAAGGTACGCTCGGTTTTGG 57.917 50.000 0.00 0.00 0.00 3.28
7676 9684 3.364267 GGTTTAAGGTACGCTCGGTTTTG 60.364 47.826 0.00 0.00 0.00 2.44
7677 9685 2.807967 GGTTTAAGGTACGCTCGGTTTT 59.192 45.455 0.00 0.00 0.00 2.43
7678 9686 2.224257 TGGTTTAAGGTACGCTCGGTTT 60.224 45.455 0.00 0.00 0.00 3.27
7679 9687 1.344114 TGGTTTAAGGTACGCTCGGTT 59.656 47.619 0.00 0.00 0.00 4.44
7680 9688 0.968405 TGGTTTAAGGTACGCTCGGT 59.032 50.000 0.00 0.00 0.00 4.69
7681 9689 1.067354 AGTGGTTTAAGGTACGCTCGG 60.067 52.381 0.00 0.00 0.00 4.63
7682 9690 2.358939 AGTGGTTTAAGGTACGCTCG 57.641 50.000 0.00 0.00 0.00 5.03
7683 9691 3.656559 TCAAGTGGTTTAAGGTACGCTC 58.343 45.455 0.00 0.00 0.00 5.03
7684 9692 3.756933 TCAAGTGGTTTAAGGTACGCT 57.243 42.857 0.00 0.00 0.00 5.07
7685 9693 4.453136 TCATTCAAGTGGTTTAAGGTACGC 59.547 41.667 0.00 0.00 0.00 4.42
7686 9694 6.548441 TTCATTCAAGTGGTTTAAGGTACG 57.452 37.500 0.00 0.00 0.00 3.67
7687 9695 8.410912 AGTTTTCATTCAAGTGGTTTAAGGTAC 58.589 33.333 0.00 0.00 0.00 3.34
7688 9696 8.528044 AGTTTTCATTCAAGTGGTTTAAGGTA 57.472 30.769 0.00 0.00 0.00 3.08
7689 9697 7.418337 AGTTTTCATTCAAGTGGTTTAAGGT 57.582 32.000 0.00 0.00 0.00 3.50
7690 9698 9.810545 TTAAGTTTTCATTCAAGTGGTTTAAGG 57.189 29.630 0.00 0.00 0.00 2.69
7694 9702 9.936759 TCTTTTAAGTTTTCATTCAAGTGGTTT 57.063 25.926 0.00 0.00 0.00 3.27
7695 9703 9.936759 TTCTTTTAAGTTTTCATTCAAGTGGTT 57.063 25.926 0.00 0.00 0.00 3.67
7696 9704 9.936759 TTTCTTTTAAGTTTTCATTCAAGTGGT 57.063 25.926 0.00 0.00 0.00 4.16
7706 9714 9.364989 CCATTGACTGTTTCTTTTAAGTTTTCA 57.635 29.630 0.00 0.00 0.00 2.69
7707 9715 8.328146 GCCATTGACTGTTTCTTTTAAGTTTTC 58.672 33.333 0.00 0.00 0.00 2.29
7708 9716 8.040727 AGCCATTGACTGTTTCTTTTAAGTTTT 58.959 29.630 0.00 0.00 0.00 2.43
7709 9717 7.555965 AGCCATTGACTGTTTCTTTTAAGTTT 58.444 30.769 0.00 0.00 0.00 2.66
7710 9718 7.112452 AGCCATTGACTGTTTCTTTTAAGTT 57.888 32.000 0.00 0.00 0.00 2.66
7711 9719 6.715347 AGCCATTGACTGTTTCTTTTAAGT 57.285 33.333 0.00 0.00 0.00 2.24
7712 9720 7.323656 CGTAAGCCATTGACTGTTTCTTTTAAG 59.676 37.037 0.00 0.00 0.00 1.85
7713 9721 7.136119 CGTAAGCCATTGACTGTTTCTTTTAA 58.864 34.615 0.00 0.00 0.00 1.52
7714 9722 6.261381 ACGTAAGCCATTGACTGTTTCTTTTA 59.739 34.615 0.00 0.00 45.62 1.52
7715 9723 5.067283 ACGTAAGCCATTGACTGTTTCTTTT 59.933 36.000 0.00 0.00 45.62 2.27
7724 9732 3.120321 TGTGAACGTAAGCCATTGACT 57.880 42.857 0.00 0.00 45.62 3.41
7726 9734 2.811431 CCTTGTGAACGTAAGCCATTGA 59.189 45.455 0.00 0.00 45.62 2.57
7732 9740 2.415512 GGATGACCTTGTGAACGTAAGC 59.584 50.000 0.00 0.00 45.62 3.09
7759 9767 2.654912 CGTGCCGTTTGGAGTCGTC 61.655 63.158 0.00 0.00 37.49 4.20
7771 9779 3.576356 GATGCCACCATCGTGCCG 61.576 66.667 0.00 0.00 38.59 5.69
7777 9785 1.723870 GCAGTTCGATGCCACCATC 59.276 57.895 0.00 0.00 43.55 3.51
7780 9788 4.166011 GCGCAGTTCGATGCCACC 62.166 66.667 0.30 0.00 43.49 4.61
7786 9794 4.838152 ATGGCGGCGCAGTTCGAT 62.838 61.111 34.36 11.68 41.67 3.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.