Multiple sequence alignment - TraesCS6B01G408400
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6B01G408400 | chr6B | 100.000 | 2240 | 0 | 0 | 1 | 2240 | 682587582 | 682589821 | 0.000000e+00 | 4137.0 |
1 | TraesCS6B01G408400 | chr6B | 77.948 | 1043 | 79 | 69 | 427 | 1357 | 682655624 | 682656627 | 1.530000e-141 | 512.0 |
2 | TraesCS6B01G408400 | chr6B | 80.612 | 196 | 29 | 5 | 2 | 190 | 84603196 | 84603389 | 2.320000e-30 | 143.0 |
3 | TraesCS6B01G408400 | chr6D | 87.436 | 1361 | 93 | 39 | 217 | 1550 | 450136132 | 450137441 | 0.000000e+00 | 1495.0 |
4 | TraesCS6B01G408400 | chr6D | 81.339 | 1120 | 80 | 58 | 279 | 1323 | 450164318 | 450165383 | 0.000000e+00 | 791.0 |
5 | TraesCS6B01G408400 | chr6D | 80.383 | 678 | 69 | 29 | 1578 | 2235 | 450137438 | 450138071 | 7.290000e-125 | 457.0 |
6 | TraesCS6B01G408400 | chr6A | 81.818 | 1782 | 146 | 93 | 295 | 1979 | 595647709 | 595649409 | 0.000000e+00 | 1332.0 |
7 | TraesCS6B01G408400 | chr6A | 80.568 | 1091 | 89 | 52 | 295 | 1320 | 595658357 | 595659389 | 0.000000e+00 | 726.0 |
8 | TraesCS6B01G408400 | chr6A | 85.385 | 260 | 31 | 5 | 1981 | 2240 | 595649447 | 595649699 | 1.710000e-66 | 263.0 |
9 | TraesCS6B01G408400 | chr7A | 82.888 | 187 | 25 | 5 | 9 | 190 | 174590381 | 174590197 | 6.400000e-36 | 161.0 |
10 | TraesCS6B01G408400 | chr7A | 85.714 | 91 | 6 | 3 | 1770 | 1855 | 94834461 | 94834549 | 3.060000e-14 | 89.8 |
11 | TraesCS6B01G408400 | chr1D | 82.353 | 187 | 28 | 2 | 9 | 190 | 461003268 | 461003082 | 8.280000e-35 | 158.0 |
12 | TraesCS6B01G408400 | chr1D | 79.899 | 199 | 27 | 9 | 1 | 190 | 342495035 | 342495229 | 1.400000e-27 | 134.0 |
13 | TraesCS6B01G408400 | chr4D | 81.250 | 192 | 29 | 4 | 5 | 190 | 51456617 | 51456427 | 4.980000e-32 | 148.0 |
14 | TraesCS6B01G408400 | chr5A | 80.513 | 195 | 32 | 3 | 1 | 190 | 644116326 | 644116133 | 6.450000e-31 | 145.0 |
15 | TraesCS6B01G408400 | chr5A | 85.870 | 92 | 5 | 4 | 1768 | 1855 | 322888525 | 322888612 | 8.520000e-15 | 91.6 |
16 | TraesCS6B01G408400 | chr3D | 80.203 | 197 | 30 | 5 | 1 | 190 | 463681798 | 463681604 | 3.000000e-29 | 139.0 |
17 | TraesCS6B01G408400 | chr3B | 80.000 | 195 | 34 | 2 | 1 | 190 | 749488923 | 749488729 | 3.000000e-29 | 139.0 |
18 | TraesCS6B01G408400 | chr3B | 85.870 | 92 | 5 | 4 | 1768 | 1855 | 10620106 | 10620019 | 8.520000e-15 | 91.6 |
19 | TraesCS6B01G408400 | chr2B | 81.081 | 185 | 25 | 6 | 1 | 178 | 363773474 | 363773655 | 3.000000e-29 | 139.0 |
20 | TraesCS6B01G408400 | chr2B | 85.870 | 92 | 5 | 4 | 1768 | 1855 | 8560854 | 8560767 | 8.520000e-15 | 91.6 |
21 | TraesCS6B01G408400 | chr2A | 86.957 | 92 | 5 | 6 | 1768 | 1855 | 448575866 | 448575778 | 1.830000e-16 | 97.1 |
22 | TraesCS6B01G408400 | chr2D | 86.813 | 91 | 5 | 6 | 1768 | 1855 | 338699247 | 338699161 | 6.590000e-16 | 95.3 |
23 | TraesCS6B01G408400 | chr7B | 85.714 | 91 | 5 | 4 | 1769 | 1855 | 64175540 | 64175626 | 3.060000e-14 | 89.8 |
24 | TraesCS6B01G408400 | chr7B | 85.714 | 91 | 5 | 4 | 1769 | 1855 | 706855401 | 706855487 | 3.060000e-14 | 89.8 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6B01G408400 | chr6B | 682587582 | 682589821 | 2239 | False | 4137.0 | 4137 | 100.0000 | 1 | 2240 | 1 | chr6B.!!$F2 | 2239 |
1 | TraesCS6B01G408400 | chr6B | 682655624 | 682656627 | 1003 | False | 512.0 | 512 | 77.9480 | 427 | 1357 | 1 | chr6B.!!$F3 | 930 |
2 | TraesCS6B01G408400 | chr6D | 450136132 | 450138071 | 1939 | False | 976.0 | 1495 | 83.9095 | 217 | 2235 | 2 | chr6D.!!$F2 | 2018 |
3 | TraesCS6B01G408400 | chr6D | 450164318 | 450165383 | 1065 | False | 791.0 | 791 | 81.3390 | 279 | 1323 | 1 | chr6D.!!$F1 | 1044 |
4 | TraesCS6B01G408400 | chr6A | 595647709 | 595649699 | 1990 | False | 797.5 | 1332 | 83.6015 | 295 | 2240 | 2 | chr6A.!!$F2 | 1945 |
5 | TraesCS6B01G408400 | chr6A | 595658357 | 595659389 | 1032 | False | 726.0 | 726 | 80.5680 | 295 | 1320 | 1 | chr6A.!!$F1 | 1025 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
148 | 149 | 0.032515 | TAAGGGAGCGGTGATGAGGA | 60.033 | 55.0 | 0.0 | 0.0 | 0.0 | 3.71 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2013 | 2304 | 0.029567 | GCGGTCGGAGTGTGAGATAG | 59.97 | 60.0 | 0.0 | 0.0 | 0.0 | 2.08 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
28 | 29 | 6.969828 | GGATTGGATCCTTTCGATGTATAC | 57.030 | 41.667 | 14.23 | 0.00 | 46.19 | 1.47 |
29 | 30 | 6.702329 | GGATTGGATCCTTTCGATGTATACT | 58.298 | 40.000 | 14.23 | 0.00 | 46.19 | 2.12 |
30 | 31 | 7.162082 | GGATTGGATCCTTTCGATGTATACTT | 58.838 | 38.462 | 14.23 | 0.00 | 46.19 | 2.24 |
31 | 32 | 7.332182 | GGATTGGATCCTTTCGATGTATACTTC | 59.668 | 40.741 | 14.23 | 6.56 | 46.19 | 3.01 |
32 | 33 | 6.978674 | TGGATCCTTTCGATGTATACTTCT | 57.021 | 37.500 | 14.23 | 0.00 | 0.00 | 2.85 |
33 | 34 | 6.982852 | TGGATCCTTTCGATGTATACTTCTC | 58.017 | 40.000 | 14.23 | 5.63 | 0.00 | 2.87 |
34 | 35 | 6.778069 | TGGATCCTTTCGATGTATACTTCTCT | 59.222 | 38.462 | 14.23 | 0.00 | 0.00 | 3.10 |
35 | 36 | 7.287927 | TGGATCCTTTCGATGTATACTTCTCTT | 59.712 | 37.037 | 14.23 | 0.00 | 0.00 | 2.85 |
36 | 37 | 7.810759 | GGATCCTTTCGATGTATACTTCTCTTC | 59.189 | 40.741 | 3.84 | 4.64 | 0.00 | 2.87 |
37 | 38 | 7.883391 | TCCTTTCGATGTATACTTCTCTTCT | 57.117 | 36.000 | 14.75 | 0.00 | 0.00 | 2.85 |
38 | 39 | 8.294954 | TCCTTTCGATGTATACTTCTCTTCTT | 57.705 | 34.615 | 14.75 | 0.00 | 0.00 | 2.52 |
39 | 40 | 8.407064 | TCCTTTCGATGTATACTTCTCTTCTTC | 58.593 | 37.037 | 14.75 | 0.00 | 0.00 | 2.87 |
40 | 41 | 7.377397 | CCTTTCGATGTATACTTCTCTTCTTCG | 59.623 | 40.741 | 14.75 | 2.65 | 0.00 | 3.79 |
41 | 42 | 6.301687 | TCGATGTATACTTCTCTTCTTCGG | 57.698 | 41.667 | 14.75 | 0.00 | 0.00 | 4.30 |
42 | 43 | 4.912766 | CGATGTATACTTCTCTTCTTCGGC | 59.087 | 45.833 | 14.75 | 0.00 | 0.00 | 5.54 |
43 | 44 | 4.288670 | TGTATACTTCTCTTCTTCGGCG | 57.711 | 45.455 | 0.00 | 0.00 | 0.00 | 6.46 |
44 | 45 | 3.943381 | TGTATACTTCTCTTCTTCGGCGA | 59.057 | 43.478 | 4.99 | 4.99 | 0.00 | 5.54 |
45 | 46 | 2.915738 | TACTTCTCTTCTTCGGCGAC | 57.084 | 50.000 | 10.16 | 0.00 | 0.00 | 5.19 |
46 | 47 | 1.249407 | ACTTCTCTTCTTCGGCGACT | 58.751 | 50.000 | 10.16 | 0.00 | 0.00 | 4.18 |
47 | 48 | 1.068194 | ACTTCTCTTCTTCGGCGACTG | 60.068 | 52.381 | 10.16 | 5.84 | 0.00 | 3.51 |
48 | 49 | 0.959553 | TTCTCTTCTTCGGCGACTGT | 59.040 | 50.000 | 10.16 | 0.00 | 0.00 | 3.55 |
49 | 50 | 0.959553 | TCTCTTCTTCGGCGACTGTT | 59.040 | 50.000 | 10.16 | 0.00 | 0.00 | 3.16 |
50 | 51 | 1.063806 | CTCTTCTTCGGCGACTGTTG | 58.936 | 55.000 | 10.16 | 0.00 | 0.00 | 3.33 |
51 | 52 | 0.944311 | TCTTCTTCGGCGACTGTTGC | 60.944 | 55.000 | 10.16 | 11.66 | 0.00 | 4.17 |
52 | 53 | 0.946221 | CTTCTTCGGCGACTGTTGCT | 60.946 | 55.000 | 18.86 | 0.00 | 0.00 | 3.91 |
53 | 54 | 0.315886 | TTCTTCGGCGACTGTTGCTA | 59.684 | 50.000 | 18.86 | 5.83 | 0.00 | 3.49 |
54 | 55 | 0.530744 | TCTTCGGCGACTGTTGCTAT | 59.469 | 50.000 | 18.86 | 0.00 | 0.00 | 2.97 |
55 | 56 | 1.067142 | TCTTCGGCGACTGTTGCTATT | 60.067 | 47.619 | 18.86 | 0.00 | 0.00 | 1.73 |
56 | 57 | 1.732259 | CTTCGGCGACTGTTGCTATTT | 59.268 | 47.619 | 18.86 | 0.00 | 0.00 | 1.40 |
57 | 58 | 1.803334 | TCGGCGACTGTTGCTATTTT | 58.197 | 45.000 | 18.86 | 0.00 | 0.00 | 1.82 |
58 | 59 | 2.962125 | TCGGCGACTGTTGCTATTTTA | 58.038 | 42.857 | 18.86 | 0.00 | 0.00 | 1.52 |
59 | 60 | 2.927477 | TCGGCGACTGTTGCTATTTTAG | 59.073 | 45.455 | 18.86 | 3.75 | 0.00 | 1.85 |
60 | 61 | 2.671396 | CGGCGACTGTTGCTATTTTAGT | 59.329 | 45.455 | 18.86 | 0.00 | 0.00 | 2.24 |
61 | 62 | 3.483574 | CGGCGACTGTTGCTATTTTAGTG | 60.484 | 47.826 | 18.86 | 0.00 | 0.00 | 2.74 |
62 | 63 | 3.417185 | GCGACTGTTGCTATTTTAGTGC | 58.583 | 45.455 | 12.78 | 0.00 | 0.00 | 4.40 |
63 | 64 | 3.120338 | GCGACTGTTGCTATTTTAGTGCA | 60.120 | 43.478 | 12.78 | 0.00 | 34.69 | 4.57 |
64 | 65 | 4.394795 | CGACTGTTGCTATTTTAGTGCAC | 58.605 | 43.478 | 9.40 | 9.40 | 36.37 | 4.57 |
65 | 66 | 4.152402 | CGACTGTTGCTATTTTAGTGCACT | 59.848 | 41.667 | 25.12 | 25.12 | 36.37 | 4.40 |
66 | 67 | 5.362556 | ACTGTTGCTATTTTAGTGCACTG | 57.637 | 39.130 | 29.57 | 12.36 | 36.37 | 3.66 |
67 | 68 | 4.216257 | ACTGTTGCTATTTTAGTGCACTGG | 59.784 | 41.667 | 29.57 | 12.36 | 36.37 | 4.00 |
68 | 69 | 4.141287 | TGTTGCTATTTTAGTGCACTGGT | 58.859 | 39.130 | 29.57 | 13.94 | 36.37 | 4.00 |
69 | 70 | 4.215399 | TGTTGCTATTTTAGTGCACTGGTC | 59.785 | 41.667 | 29.57 | 11.08 | 36.37 | 4.02 |
70 | 71 | 3.343617 | TGCTATTTTAGTGCACTGGTCC | 58.656 | 45.455 | 29.57 | 10.95 | 0.00 | 4.46 |
71 | 72 | 2.351726 | GCTATTTTAGTGCACTGGTCCG | 59.648 | 50.000 | 29.57 | 13.49 | 0.00 | 4.79 |
72 | 73 | 1.821216 | ATTTTAGTGCACTGGTCCGG | 58.179 | 50.000 | 29.57 | 0.00 | 0.00 | 5.14 |
73 | 74 | 0.470766 | TTTTAGTGCACTGGTCCGGT | 59.529 | 50.000 | 29.57 | 0.00 | 0.00 | 5.28 |
74 | 75 | 0.470766 | TTTAGTGCACTGGTCCGGTT | 59.529 | 50.000 | 29.57 | 1.79 | 0.00 | 4.44 |
75 | 76 | 0.034337 | TTAGTGCACTGGTCCGGTTC | 59.966 | 55.000 | 29.57 | 0.00 | 0.00 | 3.62 |
76 | 77 | 0.830444 | TAGTGCACTGGTCCGGTTCT | 60.830 | 55.000 | 29.57 | 0.40 | 0.00 | 3.01 |
77 | 78 | 1.227853 | GTGCACTGGTCCGGTTCTT | 60.228 | 57.895 | 10.32 | 0.00 | 0.00 | 2.52 |
78 | 79 | 0.034337 | GTGCACTGGTCCGGTTCTTA | 59.966 | 55.000 | 10.32 | 0.00 | 0.00 | 2.10 |
79 | 80 | 0.320374 | TGCACTGGTCCGGTTCTTAG | 59.680 | 55.000 | 0.00 | 2.57 | 0.00 | 2.18 |
80 | 81 | 1.019805 | GCACTGGTCCGGTTCTTAGC | 61.020 | 60.000 | 0.00 | 0.00 | 0.00 | 3.09 |
81 | 82 | 0.320374 | CACTGGTCCGGTTCTTAGCA | 59.680 | 55.000 | 0.00 | 0.00 | 0.00 | 3.49 |
82 | 83 | 0.320697 | ACTGGTCCGGTTCTTAGCAC | 59.679 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
83 | 84 | 0.736325 | CTGGTCCGGTTCTTAGCACG | 60.736 | 60.000 | 0.00 | 0.00 | 0.00 | 5.34 |
84 | 85 | 1.180456 | TGGTCCGGTTCTTAGCACGA | 61.180 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
85 | 86 | 0.735287 | GGTCCGGTTCTTAGCACGAC | 60.735 | 60.000 | 0.00 | 0.00 | 0.00 | 4.34 |
86 | 87 | 1.069378 | GTCCGGTTCTTAGCACGACG | 61.069 | 60.000 | 0.00 | 0.00 | 0.00 | 5.12 |
87 | 88 | 1.210931 | CCGGTTCTTAGCACGACGA | 59.789 | 57.895 | 0.00 | 0.00 | 0.00 | 4.20 |
88 | 89 | 1.069378 | CCGGTTCTTAGCACGACGAC | 61.069 | 60.000 | 0.00 | 0.00 | 0.00 | 4.34 |
89 | 90 | 0.109873 | CGGTTCTTAGCACGACGACT | 60.110 | 55.000 | 0.00 | 0.59 | 0.00 | 4.18 |
90 | 91 | 1.665161 | CGGTTCTTAGCACGACGACTT | 60.665 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
91 | 92 | 2.401351 | GGTTCTTAGCACGACGACTTT | 58.599 | 47.619 | 0.00 | 0.00 | 0.00 | 2.66 |
92 | 93 | 2.407696 | GGTTCTTAGCACGACGACTTTC | 59.592 | 50.000 | 0.00 | 0.00 | 0.00 | 2.62 |
93 | 94 | 2.342910 | TCTTAGCACGACGACTTTCC | 57.657 | 50.000 | 0.00 | 0.00 | 0.00 | 3.13 |
94 | 95 | 0.982673 | CTTAGCACGACGACTTTCCG | 59.017 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
95 | 96 | 0.592637 | TTAGCACGACGACTTTCCGA | 59.407 | 50.000 | 0.00 | 0.00 | 0.00 | 4.55 |
96 | 97 | 0.110056 | TAGCACGACGACTTTCCGAC | 60.110 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
97 | 98 | 1.371389 | GCACGACGACTTTCCGACT | 60.371 | 57.895 | 0.00 | 0.00 | 0.00 | 4.18 |
98 | 99 | 1.606350 | GCACGACGACTTTCCGACTG | 61.606 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
99 | 100 | 0.317603 | CACGACGACTTTCCGACTGT | 60.318 | 55.000 | 0.00 | 0.00 | 0.00 | 3.55 |
100 | 101 | 0.040603 | ACGACGACTTTCCGACTGTC | 60.041 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
101 | 102 | 0.237761 | CGACGACTTTCCGACTGTCT | 59.762 | 55.000 | 6.21 | 0.00 | 0.00 | 3.41 |
102 | 103 | 1.462283 | CGACGACTTTCCGACTGTCTA | 59.538 | 52.381 | 6.21 | 0.00 | 0.00 | 2.59 |
103 | 104 | 2.724228 | CGACGACTTTCCGACTGTCTAC | 60.724 | 54.545 | 6.21 | 0.00 | 0.00 | 2.59 |
104 | 105 | 2.483491 | GACGACTTTCCGACTGTCTACT | 59.517 | 50.000 | 6.21 | 0.00 | 0.00 | 2.57 |
105 | 106 | 3.668447 | ACGACTTTCCGACTGTCTACTA | 58.332 | 45.455 | 6.21 | 0.00 | 0.00 | 1.82 |
106 | 107 | 3.434984 | ACGACTTTCCGACTGTCTACTAC | 59.565 | 47.826 | 6.21 | 0.00 | 0.00 | 2.73 |
107 | 108 | 3.434641 | CGACTTTCCGACTGTCTACTACA | 59.565 | 47.826 | 6.21 | 0.00 | 36.42 | 2.74 |
108 | 109 | 4.083643 | CGACTTTCCGACTGTCTACTACAA | 60.084 | 45.833 | 6.21 | 0.00 | 37.74 | 2.41 |
109 | 110 | 5.118642 | ACTTTCCGACTGTCTACTACAAC | 57.881 | 43.478 | 6.21 | 0.00 | 37.74 | 3.32 |
110 | 111 | 4.581824 | ACTTTCCGACTGTCTACTACAACA | 59.418 | 41.667 | 6.21 | 0.00 | 37.74 | 3.33 |
111 | 112 | 5.068198 | ACTTTCCGACTGTCTACTACAACAA | 59.932 | 40.000 | 6.21 | 0.00 | 37.74 | 2.83 |
112 | 113 | 4.761235 | TCCGACTGTCTACTACAACAAG | 57.239 | 45.455 | 6.21 | 0.00 | 37.74 | 3.16 |
113 | 114 | 4.139786 | TCCGACTGTCTACTACAACAAGT | 58.860 | 43.478 | 6.21 | 0.00 | 37.74 | 3.16 |
114 | 115 | 4.581824 | TCCGACTGTCTACTACAACAAGTT | 59.418 | 41.667 | 6.21 | 0.00 | 37.74 | 2.66 |
115 | 116 | 5.068198 | TCCGACTGTCTACTACAACAAGTTT | 59.932 | 40.000 | 6.21 | 0.00 | 37.74 | 2.66 |
116 | 117 | 5.175126 | CCGACTGTCTACTACAACAAGTTTG | 59.825 | 44.000 | 6.21 | 0.00 | 37.74 | 2.93 |
117 | 118 | 5.175126 | CGACTGTCTACTACAACAAGTTTGG | 59.825 | 44.000 | 6.21 | 0.00 | 37.74 | 3.28 |
118 | 119 | 4.814771 | ACTGTCTACTACAACAAGTTTGGC | 59.185 | 41.667 | 0.00 | 0.00 | 37.74 | 4.52 |
119 | 120 | 4.131596 | TGTCTACTACAACAAGTTTGGCC | 58.868 | 43.478 | 0.00 | 0.00 | 34.29 | 5.36 |
120 | 121 | 4.141574 | TGTCTACTACAACAAGTTTGGCCT | 60.142 | 41.667 | 3.32 | 0.00 | 34.29 | 5.19 |
121 | 122 | 4.213482 | GTCTACTACAACAAGTTTGGCCTG | 59.787 | 45.833 | 3.32 | 0.00 | 0.00 | 4.85 |
122 | 123 | 3.290948 | ACTACAACAAGTTTGGCCTGA | 57.709 | 42.857 | 3.32 | 0.00 | 0.00 | 3.86 |
123 | 124 | 2.949644 | ACTACAACAAGTTTGGCCTGAC | 59.050 | 45.455 | 3.32 | 2.11 | 0.00 | 3.51 |
124 | 125 | 2.143876 | ACAACAAGTTTGGCCTGACT | 57.856 | 45.000 | 3.32 | 4.87 | 0.00 | 3.41 |
125 | 126 | 2.024414 | ACAACAAGTTTGGCCTGACTC | 58.976 | 47.619 | 3.32 | 0.00 | 0.00 | 3.36 |
126 | 127 | 1.338020 | CAACAAGTTTGGCCTGACTCC | 59.662 | 52.381 | 3.32 | 0.00 | 0.00 | 3.85 |
127 | 128 | 0.535102 | ACAAGTTTGGCCTGACTCCG | 60.535 | 55.000 | 3.32 | 5.71 | 0.00 | 4.63 |
128 | 129 | 0.250295 | CAAGTTTGGCCTGACTCCGA | 60.250 | 55.000 | 3.32 | 0.00 | 0.00 | 4.55 |
129 | 130 | 0.693049 | AAGTTTGGCCTGACTCCGAT | 59.307 | 50.000 | 3.32 | 0.00 | 0.00 | 4.18 |
130 | 131 | 1.568504 | AGTTTGGCCTGACTCCGATA | 58.431 | 50.000 | 3.32 | 0.00 | 0.00 | 2.92 |
131 | 132 | 1.906574 | AGTTTGGCCTGACTCCGATAA | 59.093 | 47.619 | 3.32 | 0.00 | 0.00 | 1.75 |
132 | 133 | 2.093447 | AGTTTGGCCTGACTCCGATAAG | 60.093 | 50.000 | 3.32 | 0.00 | 0.00 | 1.73 |
133 | 134 | 0.830648 | TTGGCCTGACTCCGATAAGG | 59.169 | 55.000 | 3.32 | 0.00 | 42.97 | 2.69 |
134 | 135 | 1.048724 | TGGCCTGACTCCGATAAGGG | 61.049 | 60.000 | 3.32 | 0.00 | 41.52 | 3.95 |
135 | 136 | 0.759436 | GGCCTGACTCCGATAAGGGA | 60.759 | 60.000 | 0.00 | 0.00 | 41.52 | 4.20 |
144 | 145 | 3.201342 | CGATAAGGGAGCGGTGATG | 57.799 | 57.895 | 0.00 | 0.00 | 31.79 | 3.07 |
145 | 146 | 0.673985 | CGATAAGGGAGCGGTGATGA | 59.326 | 55.000 | 0.00 | 0.00 | 31.79 | 2.92 |
146 | 147 | 1.336332 | CGATAAGGGAGCGGTGATGAG | 60.336 | 57.143 | 0.00 | 0.00 | 31.79 | 2.90 |
147 | 148 | 1.001406 | GATAAGGGAGCGGTGATGAGG | 59.999 | 57.143 | 0.00 | 0.00 | 0.00 | 3.86 |
148 | 149 | 0.032515 | TAAGGGAGCGGTGATGAGGA | 60.033 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
149 | 150 | 1.617947 | AAGGGAGCGGTGATGAGGAC | 61.618 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
150 | 151 | 2.105128 | GGAGCGGTGATGAGGACG | 59.895 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
151 | 152 | 2.105128 | GAGCGGTGATGAGGACGG | 59.895 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
152 | 153 | 4.148825 | AGCGGTGATGAGGACGGC | 62.149 | 66.667 | 0.00 | 0.00 | 39.32 | 5.68 |
154 | 155 | 4.129737 | CGGTGATGAGGACGGCGT | 62.130 | 66.667 | 14.65 | 14.65 | 0.00 | 5.68 |
155 | 156 | 2.202756 | GGTGATGAGGACGGCGTC | 60.203 | 66.667 | 30.72 | 30.72 | 0.00 | 5.19 |
163 | 164 | 4.011517 | GGACGGCGTCCCTTTGGA | 62.012 | 66.667 | 41.63 | 0.00 | 46.19 | 3.53 |
164 | 165 | 2.267961 | GACGGCGTCCCTTTGGAT | 59.732 | 61.111 | 28.72 | 0.00 | 44.28 | 3.41 |
165 | 166 | 1.814169 | GACGGCGTCCCTTTGGATC | 60.814 | 63.158 | 28.72 | 0.00 | 44.28 | 3.36 |
166 | 167 | 2.267642 | CGGCGTCCCTTTGGATCA | 59.732 | 61.111 | 0.00 | 0.00 | 44.28 | 2.92 |
167 | 168 | 2.106683 | CGGCGTCCCTTTGGATCAC | 61.107 | 63.158 | 0.00 | 0.00 | 44.28 | 3.06 |
168 | 169 | 1.299976 | GGCGTCCCTTTGGATCACT | 59.700 | 57.895 | 0.00 | 0.00 | 44.28 | 3.41 |
169 | 170 | 0.744771 | GGCGTCCCTTTGGATCACTC | 60.745 | 60.000 | 0.00 | 0.00 | 44.28 | 3.51 |
170 | 171 | 0.744771 | GCGTCCCTTTGGATCACTCC | 60.745 | 60.000 | 0.00 | 0.00 | 44.28 | 3.85 |
180 | 181 | 3.616956 | TGGATCACTCCAGTGCTTTAG | 57.383 | 47.619 | 1.49 | 0.00 | 46.95 | 1.85 |
181 | 182 | 2.906389 | TGGATCACTCCAGTGCTTTAGT | 59.094 | 45.455 | 1.49 | 0.00 | 46.95 | 2.24 |
182 | 183 | 3.055819 | TGGATCACTCCAGTGCTTTAGTC | 60.056 | 47.826 | 1.49 | 0.00 | 46.95 | 2.59 |
183 | 184 | 3.055819 | GGATCACTCCAGTGCTTTAGTCA | 60.056 | 47.826 | 1.49 | 0.00 | 45.25 | 3.41 |
184 | 185 | 4.383552 | GGATCACTCCAGTGCTTTAGTCAT | 60.384 | 45.833 | 1.49 | 0.00 | 45.25 | 3.06 |
185 | 186 | 4.623932 | TCACTCCAGTGCTTTAGTCATT | 57.376 | 40.909 | 1.49 | 0.00 | 45.25 | 2.57 |
186 | 187 | 4.318332 | TCACTCCAGTGCTTTAGTCATTG | 58.682 | 43.478 | 1.49 | 0.00 | 45.25 | 2.82 |
187 | 188 | 3.077359 | ACTCCAGTGCTTTAGTCATTGC | 58.923 | 45.455 | 0.00 | 0.00 | 0.00 | 3.56 |
188 | 189 | 3.244700 | ACTCCAGTGCTTTAGTCATTGCT | 60.245 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
189 | 190 | 4.020218 | ACTCCAGTGCTTTAGTCATTGCTA | 60.020 | 41.667 | 0.00 | 0.00 | 0.00 | 3.49 |
190 | 191 | 4.253685 | TCCAGTGCTTTAGTCATTGCTAC | 58.746 | 43.478 | 0.00 | 0.00 | 0.00 | 3.58 |
191 | 192 | 4.002982 | CCAGTGCTTTAGTCATTGCTACA | 58.997 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
192 | 193 | 4.455533 | CCAGTGCTTTAGTCATTGCTACAA | 59.544 | 41.667 | 0.00 | 0.00 | 0.00 | 2.41 |
193 | 194 | 5.385617 | CAGTGCTTTAGTCATTGCTACAAC | 58.614 | 41.667 | 0.00 | 0.00 | 0.00 | 3.32 |
194 | 195 | 5.049474 | CAGTGCTTTAGTCATTGCTACAACA | 60.049 | 40.000 | 0.00 | 0.00 | 0.00 | 3.33 |
195 | 196 | 5.707298 | AGTGCTTTAGTCATTGCTACAACAT | 59.293 | 36.000 | 0.00 | 0.00 | 0.00 | 2.71 |
196 | 197 | 5.796935 | GTGCTTTAGTCATTGCTACAACATG | 59.203 | 40.000 | 0.00 | 0.00 | 0.00 | 3.21 |
197 | 198 | 5.106197 | TGCTTTAGTCATTGCTACAACATGG | 60.106 | 40.000 | 0.00 | 0.00 | 0.00 | 3.66 |
198 | 199 | 5.123820 | GCTTTAGTCATTGCTACAACATGGA | 59.876 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
199 | 200 | 6.183360 | GCTTTAGTCATTGCTACAACATGGAT | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
200 | 201 | 6.682423 | TTAGTCATTGCTACAACATGGATG | 57.318 | 37.500 | 0.00 | 0.00 | 0.00 | 3.51 |
201 | 202 | 3.379372 | AGTCATTGCTACAACATGGATGC | 59.621 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
202 | 203 | 3.129113 | GTCATTGCTACAACATGGATGCA | 59.871 | 43.478 | 0.00 | 0.00 | 0.00 | 3.96 |
203 | 204 | 3.955551 | TCATTGCTACAACATGGATGCAT | 59.044 | 39.130 | 0.00 | 0.00 | 0.00 | 3.96 |
204 | 205 | 4.403113 | TCATTGCTACAACATGGATGCATT | 59.597 | 37.500 | 0.00 | 0.00 | 0.00 | 3.56 |
205 | 206 | 4.374843 | TTGCTACAACATGGATGCATTC | 57.625 | 40.909 | 0.00 | 0.00 | 0.00 | 2.67 |
206 | 207 | 3.623703 | TGCTACAACATGGATGCATTCT | 58.376 | 40.909 | 6.53 | 0.00 | 0.00 | 2.40 |
207 | 208 | 4.018490 | TGCTACAACATGGATGCATTCTT | 58.982 | 39.130 | 6.53 | 0.00 | 0.00 | 2.52 |
208 | 209 | 4.463539 | TGCTACAACATGGATGCATTCTTT | 59.536 | 37.500 | 6.53 | 0.00 | 0.00 | 2.52 |
209 | 210 | 5.047164 | TGCTACAACATGGATGCATTCTTTT | 60.047 | 36.000 | 6.53 | 0.00 | 0.00 | 2.27 |
210 | 211 | 5.870978 | GCTACAACATGGATGCATTCTTTTT | 59.129 | 36.000 | 6.53 | 0.00 | 0.00 | 1.94 |
211 | 212 | 6.035327 | GCTACAACATGGATGCATTCTTTTTC | 59.965 | 38.462 | 6.53 | 0.00 | 0.00 | 2.29 |
212 | 213 | 6.105397 | ACAACATGGATGCATTCTTTTTCT | 57.895 | 33.333 | 6.53 | 0.00 | 0.00 | 2.52 |
213 | 214 | 5.929992 | ACAACATGGATGCATTCTTTTTCTG | 59.070 | 36.000 | 6.53 | 0.00 | 0.00 | 3.02 |
214 | 215 | 5.733620 | ACATGGATGCATTCTTTTTCTGT | 57.266 | 34.783 | 6.53 | 0.00 | 0.00 | 3.41 |
215 | 216 | 5.475719 | ACATGGATGCATTCTTTTTCTGTG | 58.524 | 37.500 | 6.53 | 0.00 | 0.00 | 3.66 |
219 | 220 | 7.048629 | TGGATGCATTCTTTTTCTGTGTTTA | 57.951 | 32.000 | 6.53 | 0.00 | 0.00 | 2.01 |
253 | 254 | 1.658373 | CGCGGCATGATGAAAAGATCG | 60.658 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
294 | 296 | 6.375455 | ACAATACTGCTCATTTTTGGACTAGG | 59.625 | 38.462 | 0.00 | 0.00 | 0.00 | 3.02 |
303 | 305 | 5.838521 | TCATTTTTGGACTAGGGAAAGCTTT | 59.161 | 36.000 | 12.53 | 12.53 | 0.00 | 3.51 |
306 | 308 | 4.986054 | TTGGACTAGGGAAAGCTTTACA | 57.014 | 40.909 | 22.79 | 2.44 | 0.00 | 2.41 |
330 | 333 | 2.021457 | TCGTCGAGAATGGATGCACTA | 58.979 | 47.619 | 0.00 | 0.00 | 29.11 | 2.74 |
373 | 377 | 5.701290 | GCTGTGTAACTCCATAAGTTTGACT | 59.299 | 40.000 | 0.00 | 0.00 | 46.26 | 3.41 |
374 | 378 | 6.347725 | GCTGTGTAACTCCATAAGTTTGACTG | 60.348 | 42.308 | 0.00 | 0.41 | 46.26 | 3.51 |
375 | 379 | 6.588204 | TGTGTAACTCCATAAGTTTGACTGT | 58.412 | 36.000 | 0.00 | 0.00 | 46.26 | 3.55 |
376 | 380 | 7.051623 | TGTGTAACTCCATAAGTTTGACTGTT | 58.948 | 34.615 | 0.00 | 0.00 | 46.26 | 3.16 |
377 | 381 | 7.554835 | TGTGTAACTCCATAAGTTTGACTGTTT | 59.445 | 33.333 | 0.00 | 0.00 | 46.26 | 2.83 |
378 | 382 | 8.068380 | GTGTAACTCCATAAGTTTGACTGTTTC | 58.932 | 37.037 | 0.00 | 0.00 | 46.26 | 2.78 |
379 | 383 | 7.990886 | TGTAACTCCATAAGTTTGACTGTTTCT | 59.009 | 33.333 | 0.00 | 0.00 | 46.26 | 2.52 |
380 | 384 | 6.867662 | ACTCCATAAGTTTGACTGTTTCTG | 57.132 | 37.500 | 0.00 | 0.00 | 33.03 | 3.02 |
409 | 417 | 3.197766 | GGAGAGAGAGAGTGAGAGACTGA | 59.802 | 52.174 | 0.00 | 0.00 | 33.83 | 3.41 |
434 | 442 | 4.520179 | GGATGGGTACTACGTTGGAAATT | 58.480 | 43.478 | 0.00 | 0.00 | 0.00 | 1.82 |
636 | 662 | 0.681733 | GTGCAGGAGAGGAGAACACA | 59.318 | 55.000 | 0.00 | 0.00 | 0.00 | 3.72 |
637 | 663 | 0.681733 | TGCAGGAGAGGAGAACACAC | 59.318 | 55.000 | 0.00 | 0.00 | 0.00 | 3.82 |
638 | 664 | 0.972883 | GCAGGAGAGGAGAACACACT | 59.027 | 55.000 | 0.00 | 0.00 | 0.00 | 3.55 |
640 | 666 | 2.524306 | CAGGAGAGGAGAACACACTCT | 58.476 | 52.381 | 0.00 | 0.00 | 43.81 | 3.24 |
641 | 667 | 2.896685 | CAGGAGAGGAGAACACACTCTT | 59.103 | 50.000 | 0.00 | 0.00 | 41.38 | 2.85 |
642 | 668 | 3.323403 | CAGGAGAGGAGAACACACTCTTT | 59.677 | 47.826 | 0.00 | 0.00 | 41.38 | 2.52 |
643 | 669 | 3.323403 | AGGAGAGGAGAACACACTCTTTG | 59.677 | 47.826 | 0.00 | 0.00 | 41.38 | 2.77 |
662 | 715 | 0.322816 | GGATCCACTGCTTTGCTGGA | 60.323 | 55.000 | 6.95 | 3.58 | 38.47 | 3.86 |
718 | 782 | 2.368875 | TCCACAAGTTCTTCCTCACTCC | 59.631 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
753 | 825 | 6.123651 | CCTTCTTCTTCCTCTGCTACTAGTA | 58.876 | 44.000 | 1.89 | 1.89 | 0.00 | 1.82 |
760 | 832 | 2.359531 | CCTCTGCTACTAGTACCAGTGC | 59.640 | 54.545 | 19.94 | 12.79 | 0.00 | 4.40 |
799 | 876 | 2.167900 | GCCCGAGTACTACCATTTCACT | 59.832 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
824 | 901 | 5.379732 | CTCAGAAAGAGGTACGAAGAAGT | 57.620 | 43.478 | 0.00 | 0.00 | 40.84 | 3.01 |
825 | 902 | 6.497785 | CTCAGAAAGAGGTACGAAGAAGTA | 57.502 | 41.667 | 0.00 | 0.00 | 40.84 | 2.24 |
826 | 903 | 6.497785 | TCAGAAAGAGGTACGAAGAAGTAG | 57.502 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
827 | 904 | 5.096849 | CAGAAAGAGGTACGAAGAAGTAGC | 58.903 | 45.833 | 0.00 | 0.00 | 43.26 | 3.58 |
828 | 905 | 4.765856 | AGAAAGAGGTACGAAGAAGTAGCA | 59.234 | 41.667 | 8.68 | 0.00 | 44.78 | 3.49 |
829 | 906 | 4.437772 | AAGAGGTACGAAGAAGTAGCAC | 57.562 | 45.455 | 8.68 | 3.09 | 44.78 | 4.40 |
856 | 933 | 3.196254 | ACTGCATTTTCACAATCCATCCC | 59.804 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
947 | 1041 | 5.238650 | AGCGCAGTATGTTTTAGTTTGAACT | 59.761 | 36.000 | 11.47 | 1.60 | 40.00 | 3.01 |
948 | 1042 | 5.339611 | GCGCAGTATGTTTTAGTTTGAACTG | 59.660 | 40.000 | 0.30 | 0.00 | 38.01 | 3.16 |
958 | 1063 | 8.842280 | TGTTTTAGTTTGAACTGTAACCATAGG | 58.158 | 33.333 | 6.64 | 0.00 | 40.07 | 2.57 |
1154 | 1264 | 4.559063 | CATGGCGGCCTCCTCCAG | 62.559 | 72.222 | 21.46 | 0.00 | 32.78 | 3.86 |
1240 | 1380 | 3.857309 | AAGCAGCAGCCCCAGTGAC | 62.857 | 63.158 | 0.00 | 0.00 | 43.56 | 3.67 |
1283 | 1427 | 3.044059 | GCATGCAGTCGTGGAAGCC | 62.044 | 63.158 | 14.21 | 0.00 | 33.03 | 4.35 |
1287 | 1431 | 2.092882 | GCAGTCGTGGAAGCCGTAC | 61.093 | 63.158 | 0.00 | 0.00 | 0.00 | 3.67 |
1290 | 1434 | 1.513586 | GTCGTGGAAGCCGTACTCG | 60.514 | 63.158 | 0.00 | 0.00 | 0.00 | 4.18 |
1294 | 1438 | 0.179169 | GTGGAAGCCGTACTCGTCTC | 60.179 | 60.000 | 0.00 | 0.00 | 35.01 | 3.36 |
1395 | 1553 | 9.490379 | AGTAGTGATTTAGTTCTACTTTTGGTG | 57.510 | 33.333 | 0.00 | 0.00 | 39.66 | 4.17 |
1396 | 1554 | 9.485206 | GTAGTGATTTAGTTCTACTTTTGGTGA | 57.515 | 33.333 | 0.00 | 0.00 | 32.64 | 4.02 |
1403 | 1561 | 8.911918 | TTAGTTCTACTTTTGGTGATTTAGCA | 57.088 | 30.769 | 0.00 | 0.00 | 34.39 | 3.49 |
1413 | 1571 | 4.326826 | TGGTGATTTAGCAAGAGGAAGTG | 58.673 | 43.478 | 0.00 | 0.00 | 33.01 | 3.16 |
1420 | 1578 | 2.609747 | AGCAAGAGGAAGTGGTAGTGA | 58.390 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
1452 | 1613 | 2.422597 | GCTTTTGGGGGTTGTATTTGC | 58.577 | 47.619 | 0.00 | 0.00 | 0.00 | 3.68 |
1490 | 1652 | 2.053627 | GCGCCATTTCTTGTTTCAGTG | 58.946 | 47.619 | 0.00 | 0.00 | 0.00 | 3.66 |
1495 | 1657 | 4.682860 | GCCATTTCTTGTTTCAGTGTGATG | 59.317 | 41.667 | 0.00 | 0.00 | 0.00 | 3.07 |
1496 | 1663 | 5.507817 | GCCATTTCTTGTTTCAGTGTGATGA | 60.508 | 40.000 | 0.00 | 0.00 | 0.00 | 2.92 |
1514 | 1681 | 4.162540 | CCCTGATGGTGGTGGGTA | 57.837 | 61.111 | 0.00 | 0.00 | 35.13 | 3.69 |
1515 | 1682 | 1.607612 | CCCTGATGGTGGTGGGTAC | 59.392 | 63.158 | 0.00 | 0.00 | 35.13 | 3.34 |
1550 | 1754 | 5.794894 | ACCAGACTACCAGTAACATGAAAG | 58.205 | 41.667 | 0.00 | 0.00 | 0.00 | 2.62 |
1551 | 1755 | 5.542635 | ACCAGACTACCAGTAACATGAAAGA | 59.457 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
1552 | 1756 | 6.213600 | ACCAGACTACCAGTAACATGAAAGAT | 59.786 | 38.462 | 0.00 | 0.00 | 0.00 | 2.40 |
1553 | 1757 | 6.536582 | CCAGACTACCAGTAACATGAAAGATG | 59.463 | 42.308 | 0.00 | 0.00 | 0.00 | 2.90 |
1554 | 1758 | 6.536582 | CAGACTACCAGTAACATGAAAGATGG | 59.463 | 42.308 | 0.00 | 3.47 | 0.00 | 3.51 |
1555 | 1759 | 6.213600 | AGACTACCAGTAACATGAAAGATGGT | 59.786 | 38.462 | 0.00 | 9.41 | 42.08 | 3.55 |
1556 | 1760 | 6.779860 | ACTACCAGTAACATGAAAGATGGTT | 58.220 | 36.000 | 15.67 | 0.00 | 40.03 | 3.67 |
1557 | 1761 | 6.879458 | ACTACCAGTAACATGAAAGATGGTTC | 59.121 | 38.462 | 15.67 | 0.00 | 40.03 | 3.62 |
1558 | 1762 | 5.630121 | ACCAGTAACATGAAAGATGGTTCA | 58.370 | 37.500 | 0.00 | 0.00 | 41.59 | 3.18 |
1559 | 1763 | 5.473504 | ACCAGTAACATGAAAGATGGTTCAC | 59.526 | 40.000 | 0.00 | 0.00 | 40.22 | 3.18 |
1560 | 1764 | 5.390885 | CCAGTAACATGAAAGATGGTTCACG | 60.391 | 44.000 | 0.00 | 0.00 | 40.22 | 4.35 |
1561 | 1765 | 5.179368 | CAGTAACATGAAAGATGGTTCACGT | 59.821 | 40.000 | 0.00 | 0.00 | 40.22 | 4.49 |
1562 | 1766 | 5.763204 | AGTAACATGAAAGATGGTTCACGTT | 59.237 | 36.000 | 0.00 | 4.98 | 43.88 | 3.99 |
1563 | 1767 | 6.932400 | AGTAACATGAAAGATGGTTCACGTTA | 59.068 | 34.615 | 0.00 | 3.29 | 40.89 | 3.18 |
1564 | 1768 | 6.817765 | AACATGAAAGATGGTTCACGTTAT | 57.182 | 33.333 | 0.00 | 0.00 | 40.89 | 1.89 |
1565 | 1769 | 6.817765 | ACATGAAAGATGGTTCACGTTATT | 57.182 | 33.333 | 0.00 | 0.00 | 40.22 | 1.40 |
1566 | 1770 | 6.842163 | ACATGAAAGATGGTTCACGTTATTC | 58.158 | 36.000 | 0.00 | 0.00 | 40.22 | 1.75 |
1567 | 1771 | 5.524511 | TGAAAGATGGTTCACGTTATTCG | 57.475 | 39.130 | 0.00 | 0.00 | 46.00 | 3.34 |
1568 | 1772 | 5.231702 | TGAAAGATGGTTCACGTTATTCGA | 58.768 | 37.500 | 0.00 | 0.00 | 43.23 | 3.71 |
1569 | 1773 | 5.347635 | TGAAAGATGGTTCACGTTATTCGAG | 59.652 | 40.000 | 0.00 | 0.00 | 43.23 | 4.04 |
1570 | 1774 | 4.451629 | AGATGGTTCACGTTATTCGAGT | 57.548 | 40.909 | 0.00 | 0.00 | 42.86 | 4.18 |
1571 | 1775 | 5.571784 | AGATGGTTCACGTTATTCGAGTA | 57.428 | 39.130 | 0.00 | 0.00 | 42.86 | 2.59 |
1572 | 1776 | 5.338365 | AGATGGTTCACGTTATTCGAGTAC | 58.662 | 41.667 | 0.00 | 0.00 | 42.86 | 2.73 |
1573 | 1777 | 4.771590 | TGGTTCACGTTATTCGAGTACT | 57.228 | 40.909 | 0.00 | 0.00 | 42.86 | 2.73 |
1574 | 1778 | 4.478699 | TGGTTCACGTTATTCGAGTACTG | 58.521 | 43.478 | 0.00 | 0.00 | 42.86 | 2.74 |
1575 | 1779 | 3.855950 | GGTTCACGTTATTCGAGTACTGG | 59.144 | 47.826 | 0.00 | 0.00 | 42.86 | 4.00 |
1576 | 1780 | 3.141002 | TCACGTTATTCGAGTACTGGC | 57.859 | 47.619 | 0.00 | 0.00 | 42.86 | 4.85 |
1577 | 1781 | 1.844357 | CACGTTATTCGAGTACTGGCG | 59.156 | 52.381 | 0.00 | 0.00 | 42.86 | 5.69 |
1578 | 1782 | 1.739466 | ACGTTATTCGAGTACTGGCGA | 59.261 | 47.619 | 0.00 | 0.35 | 42.86 | 5.54 |
1586 | 1790 | 1.324736 | CGAGTACTGGCGAAAATCTGC | 59.675 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
1605 | 1809 | 9.979578 | AAATCTGCAGTTTAATGTGAACAATTA | 57.020 | 25.926 | 14.67 | 0.00 | 0.00 | 1.40 |
1672 | 1876 | 0.038251 | TCGACTGCCAGACATGTGTC | 60.038 | 55.000 | 1.15 | 2.01 | 45.08 | 3.67 |
1684 | 1888 | 2.814336 | GACATGTGTCTGAAGGGGTTTC | 59.186 | 50.000 | 1.15 | 0.00 | 41.65 | 2.78 |
1719 | 1923 | 5.334414 | GCTCCTGACCGAAATATTGCAATAG | 60.334 | 44.000 | 22.76 | 12.15 | 0.00 | 1.73 |
1743 | 1947 | 1.597854 | CACTTGCGGACTGAAGGCA | 60.598 | 57.895 | 0.00 | 0.00 | 34.35 | 4.75 |
1745 | 1949 | 0.613260 | ACTTGCGGACTGAAGGCATA | 59.387 | 50.000 | 0.00 | 0.00 | 36.44 | 3.14 |
1746 | 1950 | 1.003118 | ACTTGCGGACTGAAGGCATAA | 59.997 | 47.619 | 0.00 | 0.00 | 36.44 | 1.90 |
1747 | 1951 | 1.667724 | CTTGCGGACTGAAGGCATAAG | 59.332 | 52.381 | 0.00 | 0.00 | 36.44 | 1.73 |
1748 | 1952 | 0.107703 | TGCGGACTGAAGGCATAAGG | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 2.69 |
1749 | 1953 | 0.178068 | GCGGACTGAAGGCATAAGGA | 59.822 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
1750 | 1954 | 1.406887 | GCGGACTGAAGGCATAAGGAA | 60.407 | 52.381 | 0.00 | 0.00 | 0.00 | 3.36 |
1751 | 1955 | 2.746472 | GCGGACTGAAGGCATAAGGAAT | 60.746 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
1752 | 1956 | 3.134458 | CGGACTGAAGGCATAAGGAATC | 58.866 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
1753 | 1957 | 3.432186 | CGGACTGAAGGCATAAGGAATCA | 60.432 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
1754 | 1958 | 4.723309 | GGACTGAAGGCATAAGGAATCAT | 58.277 | 43.478 | 0.00 | 0.00 | 0.00 | 2.45 |
1755 | 1959 | 4.759183 | GGACTGAAGGCATAAGGAATCATC | 59.241 | 45.833 | 0.00 | 0.00 | 0.00 | 2.92 |
1756 | 1960 | 5.455899 | GGACTGAAGGCATAAGGAATCATCT | 60.456 | 44.000 | 0.00 | 0.00 | 0.00 | 2.90 |
1757 | 1961 | 6.239714 | GGACTGAAGGCATAAGGAATCATCTA | 60.240 | 42.308 | 0.00 | 0.00 | 0.00 | 1.98 |
1758 | 1962 | 6.529220 | ACTGAAGGCATAAGGAATCATCTAC | 58.471 | 40.000 | 0.00 | 0.00 | 0.00 | 2.59 |
1759 | 1963 | 6.100279 | ACTGAAGGCATAAGGAATCATCTACA | 59.900 | 38.462 | 0.00 | 0.00 | 0.00 | 2.74 |
1760 | 1964 | 6.291377 | TGAAGGCATAAGGAATCATCTACAC | 58.709 | 40.000 | 0.00 | 0.00 | 0.00 | 2.90 |
1761 | 1965 | 4.887748 | AGGCATAAGGAATCATCTACACG | 58.112 | 43.478 | 0.00 | 0.00 | 0.00 | 4.49 |
1762 | 1966 | 3.433615 | GGCATAAGGAATCATCTACACGC | 59.566 | 47.826 | 0.00 | 0.00 | 0.00 | 5.34 |
1763 | 1967 | 4.058124 | GCATAAGGAATCATCTACACGCA | 58.942 | 43.478 | 0.00 | 0.00 | 0.00 | 5.24 |
1815 | 2022 | 5.945144 | AGCTTTGCCTCATCCATTAATTT | 57.055 | 34.783 | 0.00 | 0.00 | 0.00 | 1.82 |
1816 | 2023 | 6.303903 | AGCTTTGCCTCATCCATTAATTTT | 57.696 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
1823 | 2071 | 8.821686 | TGCCTCATCCATTAATTTTAAGAAGA | 57.178 | 30.769 | 0.00 | 0.00 | 0.00 | 2.87 |
1888 | 2138 | 1.417890 | ACTAGCTGTTTGGTGCTCAGT | 59.582 | 47.619 | 0.00 | 0.00 | 40.35 | 3.41 |
1920 | 2172 | 3.270877 | GTGTAAATTCCGGCTCACATCT | 58.729 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
1927 | 2179 | 1.478510 | TCCGGCTCACATCTTTCTCTC | 59.521 | 52.381 | 0.00 | 0.00 | 0.00 | 3.20 |
1949 | 2201 | 1.078497 | CTGCCACATCAGCCCGTTA | 60.078 | 57.895 | 0.00 | 0.00 | 0.00 | 3.18 |
2012 | 2303 | 2.534990 | CCAAACTTTAGCCCATTCCCA | 58.465 | 47.619 | 0.00 | 0.00 | 0.00 | 4.37 |
2013 | 2304 | 2.233676 | CCAAACTTTAGCCCATTCCCAC | 59.766 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
2014 | 2305 | 3.165071 | CAAACTTTAGCCCATTCCCACT | 58.835 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
2024 | 2315 | 2.774234 | CCCATTCCCACTATCTCACACT | 59.226 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
2040 | 2331 | 0.742505 | CACTCCGACCGCCATAGTAA | 59.257 | 55.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2045 | 2336 | 3.875134 | CTCCGACCGCCATAGTAAATTTT | 59.125 | 43.478 | 0.00 | 0.00 | 0.00 | 1.82 |
2047 | 2338 | 3.302870 | CCGACCGCCATAGTAAATTTTCG | 60.303 | 47.826 | 0.00 | 0.00 | 0.00 | 3.46 |
2050 | 2341 | 3.307782 | ACCGCCATAGTAAATTTTCGTCG | 59.692 | 43.478 | 0.00 | 0.00 | 0.00 | 5.12 |
2056 | 2347 | 1.392510 | AGTAAATTTTCGTCGCCGCTC | 59.607 | 47.619 | 0.00 | 0.00 | 0.00 | 5.03 |
2065 | 2356 | 3.760035 | TCGCCGCTCCCAACTCTC | 61.760 | 66.667 | 0.00 | 0.00 | 0.00 | 3.20 |
2075 | 2366 | 1.241990 | CCCAACTCTCTCCGTCACGA | 61.242 | 60.000 | 0.00 | 0.00 | 0.00 | 4.35 |
2080 | 2371 | 1.968703 | CTCTCTCCGTCACGACCGTC | 61.969 | 65.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2121 | 2412 | 3.345808 | CCGGTTGTCACTGCGTGG | 61.346 | 66.667 | 0.00 | 0.00 | 33.87 | 4.94 |
2133 | 2424 | 4.752879 | GCGTGGGCCGAGCAGTAA | 62.753 | 66.667 | 16.64 | 0.00 | 39.56 | 2.24 |
2184 | 2475 | 1.609501 | CCGTCCCCAACTCTCTCCA | 60.610 | 63.158 | 0.00 | 0.00 | 0.00 | 3.86 |
2194 | 2485 | 0.035343 | ACTCTCTCCATCACCGTCGA | 60.035 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
2198 | 2489 | 3.052620 | CTCCATCACCGTCGACGCT | 62.053 | 63.158 | 31.73 | 16.93 | 38.18 | 5.07 |
2204 | 2495 | 3.735029 | ACCGTCGACGCTGTCCTC | 61.735 | 66.667 | 31.73 | 0.00 | 38.18 | 3.71 |
2205 | 2496 | 3.432588 | CCGTCGACGCTGTCCTCT | 61.433 | 66.667 | 31.73 | 0.00 | 38.18 | 3.69 |
2206 | 2497 | 2.561885 | CGTCGACGCTGTCCTCTT | 59.438 | 61.111 | 26.59 | 0.00 | 0.00 | 2.85 |
2208 | 2499 | 1.444553 | GTCGACGCTGTCCTCTTGG | 60.445 | 63.158 | 0.00 | 0.00 | 0.00 | 3.61 |
2209 | 2500 | 1.901948 | TCGACGCTGTCCTCTTGGT | 60.902 | 57.895 | 0.00 | 0.00 | 34.23 | 3.67 |
2210 | 2501 | 1.734477 | CGACGCTGTCCTCTTGGTG | 60.734 | 63.158 | 3.65 | 0.00 | 34.23 | 4.17 |
2211 | 2502 | 1.374758 | GACGCTGTCCTCTTGGTGG | 60.375 | 63.158 | 0.00 | 0.00 | 34.23 | 4.61 |
2212 | 2503 | 2.046892 | CGCTGTCCTCTTGGTGGG | 60.047 | 66.667 | 0.00 | 0.00 | 34.23 | 4.61 |
2235 | 2526 | 4.262851 | GCCTCCTTATCCATTCCTCTTCTC | 60.263 | 50.000 | 0.00 | 0.00 | 0.00 | 2.87 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
6 | 7 | 8.091449 | AGAAGTATACATCGAAAGGATCCAATC | 58.909 | 37.037 | 15.82 | 10.53 | 31.28 | 2.67 |
7 | 8 | 7.967908 | AGAAGTATACATCGAAAGGATCCAAT | 58.032 | 34.615 | 15.82 | 0.94 | 31.28 | 3.16 |
8 | 9 | 7.287927 | AGAGAAGTATACATCGAAAGGATCCAA | 59.712 | 37.037 | 15.82 | 0.00 | 31.28 | 3.53 |
9 | 10 | 6.778069 | AGAGAAGTATACATCGAAAGGATCCA | 59.222 | 38.462 | 15.82 | 0.00 | 31.28 | 3.41 |
10 | 11 | 7.222000 | AGAGAAGTATACATCGAAAGGATCC | 57.778 | 40.000 | 2.48 | 2.48 | 31.28 | 3.36 |
11 | 12 | 8.573035 | AGAAGAGAAGTATACATCGAAAGGATC | 58.427 | 37.037 | 5.50 | 0.00 | 31.28 | 3.36 |
12 | 13 | 8.472007 | AGAAGAGAAGTATACATCGAAAGGAT | 57.528 | 34.615 | 5.50 | 0.00 | 35.09 | 3.24 |
13 | 14 | 7.883391 | AGAAGAGAAGTATACATCGAAAGGA | 57.117 | 36.000 | 5.50 | 0.00 | 0.00 | 3.36 |
14 | 15 | 7.377397 | CGAAGAAGAGAAGTATACATCGAAAGG | 59.623 | 40.741 | 5.50 | 0.00 | 0.00 | 3.11 |
15 | 16 | 7.377397 | CCGAAGAAGAGAAGTATACATCGAAAG | 59.623 | 40.741 | 5.50 | 0.00 | 0.00 | 2.62 |
16 | 17 | 7.194278 | CCGAAGAAGAGAAGTATACATCGAAA | 58.806 | 38.462 | 5.50 | 0.00 | 0.00 | 3.46 |
17 | 18 | 6.726230 | CCGAAGAAGAGAAGTATACATCGAA | 58.274 | 40.000 | 5.50 | 0.00 | 0.00 | 3.71 |
18 | 19 | 5.277876 | GCCGAAGAAGAGAAGTATACATCGA | 60.278 | 44.000 | 5.50 | 0.00 | 0.00 | 3.59 |
19 | 20 | 4.912766 | GCCGAAGAAGAGAAGTATACATCG | 59.087 | 45.833 | 5.50 | 0.00 | 0.00 | 3.84 |
20 | 21 | 4.912766 | CGCCGAAGAAGAGAAGTATACATC | 59.087 | 45.833 | 5.50 | 2.46 | 0.00 | 3.06 |
21 | 22 | 4.579340 | TCGCCGAAGAAGAGAAGTATACAT | 59.421 | 41.667 | 5.50 | 0.00 | 0.00 | 2.29 |
22 | 23 | 3.943381 | TCGCCGAAGAAGAGAAGTATACA | 59.057 | 43.478 | 5.50 | 0.00 | 0.00 | 2.29 |
23 | 24 | 4.035441 | AGTCGCCGAAGAAGAGAAGTATAC | 59.965 | 45.833 | 0.00 | 0.00 | 0.00 | 1.47 |
24 | 25 | 4.035324 | CAGTCGCCGAAGAAGAGAAGTATA | 59.965 | 45.833 | 0.00 | 0.00 | 0.00 | 1.47 |
25 | 26 | 3.018149 | AGTCGCCGAAGAAGAGAAGTAT | 58.982 | 45.455 | 0.00 | 0.00 | 0.00 | 2.12 |
26 | 27 | 2.161808 | CAGTCGCCGAAGAAGAGAAGTA | 59.838 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
27 | 28 | 1.068194 | CAGTCGCCGAAGAAGAGAAGT | 60.068 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
28 | 29 | 1.068194 | ACAGTCGCCGAAGAAGAGAAG | 60.068 | 52.381 | 0.00 | 0.00 | 0.00 | 2.85 |
29 | 30 | 0.959553 | ACAGTCGCCGAAGAAGAGAA | 59.040 | 50.000 | 0.00 | 0.00 | 0.00 | 2.87 |
30 | 31 | 0.959553 | AACAGTCGCCGAAGAAGAGA | 59.040 | 50.000 | 0.00 | 0.00 | 0.00 | 3.10 |
31 | 32 | 1.063806 | CAACAGTCGCCGAAGAAGAG | 58.936 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
32 | 33 | 0.944311 | GCAACAGTCGCCGAAGAAGA | 60.944 | 55.000 | 0.00 | 0.00 | 0.00 | 2.87 |
33 | 34 | 0.946221 | AGCAACAGTCGCCGAAGAAG | 60.946 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
34 | 35 | 0.315886 | TAGCAACAGTCGCCGAAGAA | 59.684 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
35 | 36 | 0.530744 | ATAGCAACAGTCGCCGAAGA | 59.469 | 50.000 | 0.00 | 0.00 | 0.00 | 2.87 |
36 | 37 | 1.359848 | AATAGCAACAGTCGCCGAAG | 58.640 | 50.000 | 0.00 | 0.00 | 0.00 | 3.79 |
37 | 38 | 1.803334 | AAATAGCAACAGTCGCCGAA | 58.197 | 45.000 | 0.00 | 0.00 | 0.00 | 4.30 |
38 | 39 | 1.803334 | AAAATAGCAACAGTCGCCGA | 58.197 | 45.000 | 0.00 | 0.00 | 0.00 | 5.54 |
39 | 40 | 2.671396 | ACTAAAATAGCAACAGTCGCCG | 59.329 | 45.455 | 0.00 | 0.00 | 0.00 | 6.46 |
40 | 41 | 3.727970 | GCACTAAAATAGCAACAGTCGCC | 60.728 | 47.826 | 0.00 | 0.00 | 0.00 | 5.54 |
41 | 42 | 3.120338 | TGCACTAAAATAGCAACAGTCGC | 60.120 | 43.478 | 0.00 | 0.00 | 34.97 | 5.19 |
42 | 43 | 4.152402 | AGTGCACTAAAATAGCAACAGTCG | 59.848 | 41.667 | 20.16 | 0.00 | 40.35 | 4.18 |
43 | 44 | 5.385617 | CAGTGCACTAAAATAGCAACAGTC | 58.614 | 41.667 | 21.20 | 0.00 | 40.35 | 3.51 |
44 | 45 | 4.216257 | CCAGTGCACTAAAATAGCAACAGT | 59.784 | 41.667 | 21.20 | 0.00 | 40.35 | 3.55 |
45 | 46 | 4.216257 | ACCAGTGCACTAAAATAGCAACAG | 59.784 | 41.667 | 21.20 | 1.75 | 40.35 | 3.16 |
46 | 47 | 4.141287 | ACCAGTGCACTAAAATAGCAACA | 58.859 | 39.130 | 21.20 | 0.00 | 40.35 | 3.33 |
47 | 48 | 4.379499 | GGACCAGTGCACTAAAATAGCAAC | 60.379 | 45.833 | 21.20 | 2.41 | 40.35 | 4.17 |
48 | 49 | 3.756434 | GGACCAGTGCACTAAAATAGCAA | 59.244 | 43.478 | 21.20 | 0.00 | 40.35 | 3.91 |
49 | 50 | 3.343617 | GGACCAGTGCACTAAAATAGCA | 58.656 | 45.455 | 21.20 | 0.00 | 35.63 | 3.49 |
50 | 51 | 2.351726 | CGGACCAGTGCACTAAAATAGC | 59.648 | 50.000 | 21.20 | 4.86 | 0.00 | 2.97 |
51 | 52 | 2.936498 | CCGGACCAGTGCACTAAAATAG | 59.064 | 50.000 | 21.20 | 5.78 | 0.00 | 1.73 |
52 | 53 | 2.303600 | ACCGGACCAGTGCACTAAAATA | 59.696 | 45.455 | 21.20 | 0.00 | 0.00 | 1.40 |
53 | 54 | 1.073284 | ACCGGACCAGTGCACTAAAAT | 59.927 | 47.619 | 21.20 | 4.95 | 0.00 | 1.82 |
54 | 55 | 0.470766 | ACCGGACCAGTGCACTAAAA | 59.529 | 50.000 | 21.20 | 0.00 | 0.00 | 1.52 |
55 | 56 | 0.470766 | AACCGGACCAGTGCACTAAA | 59.529 | 50.000 | 21.20 | 0.00 | 0.00 | 1.85 |
56 | 57 | 0.034337 | GAACCGGACCAGTGCACTAA | 59.966 | 55.000 | 21.20 | 0.00 | 0.00 | 2.24 |
57 | 58 | 0.830444 | AGAACCGGACCAGTGCACTA | 60.830 | 55.000 | 21.20 | 0.00 | 0.00 | 2.74 |
58 | 59 | 1.696097 | AAGAACCGGACCAGTGCACT | 61.696 | 55.000 | 15.25 | 15.25 | 0.00 | 4.40 |
59 | 60 | 0.034337 | TAAGAACCGGACCAGTGCAC | 59.966 | 55.000 | 9.46 | 9.40 | 0.00 | 4.57 |
60 | 61 | 0.320374 | CTAAGAACCGGACCAGTGCA | 59.680 | 55.000 | 9.46 | 0.00 | 0.00 | 4.57 |
61 | 62 | 1.019805 | GCTAAGAACCGGACCAGTGC | 61.020 | 60.000 | 9.46 | 1.47 | 0.00 | 4.40 |
62 | 63 | 0.320374 | TGCTAAGAACCGGACCAGTG | 59.680 | 55.000 | 9.46 | 0.00 | 0.00 | 3.66 |
63 | 64 | 0.320697 | GTGCTAAGAACCGGACCAGT | 59.679 | 55.000 | 9.46 | 0.00 | 0.00 | 4.00 |
64 | 65 | 0.736325 | CGTGCTAAGAACCGGACCAG | 60.736 | 60.000 | 9.46 | 3.52 | 0.00 | 4.00 |
65 | 66 | 1.180456 | TCGTGCTAAGAACCGGACCA | 61.180 | 55.000 | 9.46 | 0.00 | 0.00 | 4.02 |
66 | 67 | 0.735287 | GTCGTGCTAAGAACCGGACC | 60.735 | 60.000 | 9.46 | 0.00 | 0.00 | 4.46 |
67 | 68 | 1.069378 | CGTCGTGCTAAGAACCGGAC | 61.069 | 60.000 | 9.46 | 0.99 | 0.00 | 4.79 |
68 | 69 | 1.210931 | CGTCGTGCTAAGAACCGGA | 59.789 | 57.895 | 9.46 | 0.00 | 0.00 | 5.14 |
69 | 70 | 1.069378 | GTCGTCGTGCTAAGAACCGG | 61.069 | 60.000 | 0.00 | 0.00 | 0.00 | 5.28 |
70 | 71 | 0.109873 | AGTCGTCGTGCTAAGAACCG | 60.110 | 55.000 | 0.00 | 0.00 | 0.00 | 4.44 |
71 | 72 | 2.061740 | AAGTCGTCGTGCTAAGAACC | 57.938 | 50.000 | 0.00 | 0.00 | 0.00 | 3.62 |
72 | 73 | 2.407696 | GGAAAGTCGTCGTGCTAAGAAC | 59.592 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
73 | 74 | 2.669364 | GGAAAGTCGTCGTGCTAAGAA | 58.331 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
74 | 75 | 1.400629 | CGGAAAGTCGTCGTGCTAAGA | 60.401 | 52.381 | 0.00 | 0.00 | 0.00 | 2.10 |
75 | 76 | 0.982673 | CGGAAAGTCGTCGTGCTAAG | 59.017 | 55.000 | 0.00 | 0.00 | 0.00 | 2.18 |
76 | 77 | 0.592637 | TCGGAAAGTCGTCGTGCTAA | 59.407 | 50.000 | 0.00 | 0.00 | 0.00 | 3.09 |
77 | 78 | 0.110056 | GTCGGAAAGTCGTCGTGCTA | 60.110 | 55.000 | 0.00 | 0.00 | 0.00 | 3.49 |
78 | 79 | 1.371389 | GTCGGAAAGTCGTCGTGCT | 60.371 | 57.895 | 0.00 | 0.00 | 0.00 | 4.40 |
79 | 80 | 1.371389 | AGTCGGAAAGTCGTCGTGC | 60.371 | 57.895 | 0.00 | 0.00 | 0.00 | 5.34 |
80 | 81 | 0.317603 | ACAGTCGGAAAGTCGTCGTG | 60.318 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
81 | 82 | 0.040603 | GACAGTCGGAAAGTCGTCGT | 60.041 | 55.000 | 0.00 | 0.00 | 0.00 | 4.34 |
82 | 83 | 0.237761 | AGACAGTCGGAAAGTCGTCG | 59.762 | 55.000 | 0.00 | 0.00 | 37.36 | 5.12 |
83 | 84 | 2.483491 | AGTAGACAGTCGGAAAGTCGTC | 59.517 | 50.000 | 0.00 | 0.00 | 37.36 | 4.20 |
84 | 85 | 2.502295 | AGTAGACAGTCGGAAAGTCGT | 58.498 | 47.619 | 0.00 | 0.00 | 37.36 | 4.34 |
85 | 86 | 3.434641 | TGTAGTAGACAGTCGGAAAGTCG | 59.565 | 47.826 | 0.00 | 0.00 | 37.36 | 4.18 |
86 | 87 | 5.152804 | GTTGTAGTAGACAGTCGGAAAGTC | 58.847 | 45.833 | 0.00 | 3.60 | 39.88 | 3.01 |
87 | 88 | 4.581824 | TGTTGTAGTAGACAGTCGGAAAGT | 59.418 | 41.667 | 0.00 | 0.00 | 39.88 | 2.66 |
88 | 89 | 5.117355 | TGTTGTAGTAGACAGTCGGAAAG | 57.883 | 43.478 | 0.00 | 0.00 | 39.88 | 2.62 |
89 | 90 | 5.068198 | ACTTGTTGTAGTAGACAGTCGGAAA | 59.932 | 40.000 | 0.00 | 0.00 | 39.88 | 3.13 |
90 | 91 | 4.581824 | ACTTGTTGTAGTAGACAGTCGGAA | 59.418 | 41.667 | 0.00 | 0.00 | 39.88 | 4.30 |
91 | 92 | 4.139786 | ACTTGTTGTAGTAGACAGTCGGA | 58.860 | 43.478 | 0.00 | 0.00 | 39.88 | 4.55 |
92 | 93 | 4.500603 | ACTTGTTGTAGTAGACAGTCGG | 57.499 | 45.455 | 0.00 | 0.00 | 39.88 | 4.79 |
93 | 94 | 5.175126 | CCAAACTTGTTGTAGTAGACAGTCG | 59.825 | 44.000 | 0.00 | 0.00 | 39.88 | 4.18 |
94 | 95 | 5.050295 | GCCAAACTTGTTGTAGTAGACAGTC | 60.050 | 44.000 | 0.00 | 0.00 | 39.88 | 3.51 |
95 | 96 | 4.814771 | GCCAAACTTGTTGTAGTAGACAGT | 59.185 | 41.667 | 0.00 | 0.00 | 39.88 | 3.55 |
96 | 97 | 4.213482 | GGCCAAACTTGTTGTAGTAGACAG | 59.787 | 45.833 | 0.00 | 0.00 | 39.88 | 3.51 |
97 | 98 | 4.131596 | GGCCAAACTTGTTGTAGTAGACA | 58.868 | 43.478 | 0.00 | 0.00 | 35.78 | 3.41 |
98 | 99 | 4.213482 | CAGGCCAAACTTGTTGTAGTAGAC | 59.787 | 45.833 | 5.01 | 0.00 | 0.00 | 2.59 |
99 | 100 | 4.101898 | TCAGGCCAAACTTGTTGTAGTAGA | 59.898 | 41.667 | 5.01 | 0.00 | 0.00 | 2.59 |
100 | 101 | 4.213482 | GTCAGGCCAAACTTGTTGTAGTAG | 59.787 | 45.833 | 5.01 | 0.00 | 0.00 | 2.57 |
101 | 102 | 4.131596 | GTCAGGCCAAACTTGTTGTAGTA | 58.868 | 43.478 | 5.01 | 0.00 | 0.00 | 1.82 |
102 | 103 | 2.949644 | GTCAGGCCAAACTTGTTGTAGT | 59.050 | 45.455 | 5.01 | 0.00 | 0.00 | 2.73 |
103 | 104 | 3.214328 | AGTCAGGCCAAACTTGTTGTAG | 58.786 | 45.455 | 5.01 | 0.00 | 0.00 | 2.74 |
104 | 105 | 3.211045 | GAGTCAGGCCAAACTTGTTGTA | 58.789 | 45.455 | 5.01 | 0.00 | 0.00 | 2.41 |
105 | 106 | 2.024414 | GAGTCAGGCCAAACTTGTTGT | 58.976 | 47.619 | 5.01 | 0.00 | 0.00 | 3.32 |
106 | 107 | 1.338020 | GGAGTCAGGCCAAACTTGTTG | 59.662 | 52.381 | 5.01 | 0.00 | 0.00 | 3.33 |
107 | 108 | 1.692411 | GGAGTCAGGCCAAACTTGTT | 58.308 | 50.000 | 5.01 | 0.00 | 0.00 | 2.83 |
108 | 109 | 0.535102 | CGGAGTCAGGCCAAACTTGT | 60.535 | 55.000 | 5.01 | 0.00 | 0.00 | 3.16 |
109 | 110 | 0.250295 | TCGGAGTCAGGCCAAACTTG | 60.250 | 55.000 | 5.01 | 5.05 | 0.00 | 3.16 |
110 | 111 | 0.693049 | ATCGGAGTCAGGCCAAACTT | 59.307 | 50.000 | 5.01 | 0.00 | 0.00 | 2.66 |
111 | 112 | 1.568504 | TATCGGAGTCAGGCCAAACT | 58.431 | 50.000 | 5.01 | 7.79 | 0.00 | 2.66 |
112 | 113 | 2.280628 | CTTATCGGAGTCAGGCCAAAC | 58.719 | 52.381 | 5.01 | 1.66 | 0.00 | 2.93 |
113 | 114 | 1.209504 | CCTTATCGGAGTCAGGCCAAA | 59.790 | 52.381 | 5.01 | 0.00 | 33.16 | 3.28 |
114 | 115 | 0.830648 | CCTTATCGGAGTCAGGCCAA | 59.169 | 55.000 | 5.01 | 0.00 | 33.16 | 4.52 |
115 | 116 | 1.048724 | CCCTTATCGGAGTCAGGCCA | 61.049 | 60.000 | 5.01 | 0.00 | 33.16 | 5.36 |
116 | 117 | 0.759436 | TCCCTTATCGGAGTCAGGCC | 60.759 | 60.000 | 0.00 | 0.00 | 33.16 | 5.19 |
117 | 118 | 0.676736 | CTCCCTTATCGGAGTCAGGC | 59.323 | 60.000 | 0.00 | 0.00 | 43.94 | 4.85 |
124 | 125 | 0.469331 | ATCACCGCTCCCTTATCGGA | 60.469 | 55.000 | 6.91 | 0.00 | 45.53 | 4.55 |
126 | 127 | 0.673985 | TCATCACCGCTCCCTTATCG | 59.326 | 55.000 | 0.00 | 0.00 | 0.00 | 2.92 |
127 | 128 | 1.001406 | CCTCATCACCGCTCCCTTATC | 59.999 | 57.143 | 0.00 | 0.00 | 0.00 | 1.75 |
128 | 129 | 1.051812 | CCTCATCACCGCTCCCTTAT | 58.948 | 55.000 | 0.00 | 0.00 | 0.00 | 1.73 |
129 | 130 | 0.032515 | TCCTCATCACCGCTCCCTTA | 60.033 | 55.000 | 0.00 | 0.00 | 0.00 | 2.69 |
130 | 131 | 1.306141 | TCCTCATCACCGCTCCCTT | 60.306 | 57.895 | 0.00 | 0.00 | 0.00 | 3.95 |
131 | 132 | 2.060980 | GTCCTCATCACCGCTCCCT | 61.061 | 63.158 | 0.00 | 0.00 | 0.00 | 4.20 |
132 | 133 | 2.501610 | GTCCTCATCACCGCTCCC | 59.498 | 66.667 | 0.00 | 0.00 | 0.00 | 4.30 |
133 | 134 | 2.105128 | CGTCCTCATCACCGCTCC | 59.895 | 66.667 | 0.00 | 0.00 | 0.00 | 4.70 |
134 | 135 | 2.105128 | CCGTCCTCATCACCGCTC | 59.895 | 66.667 | 0.00 | 0.00 | 0.00 | 5.03 |
135 | 136 | 4.148825 | GCCGTCCTCATCACCGCT | 62.149 | 66.667 | 0.00 | 0.00 | 0.00 | 5.52 |
137 | 138 | 4.129737 | ACGCCGTCCTCATCACCG | 62.130 | 66.667 | 0.00 | 0.00 | 0.00 | 4.94 |
138 | 139 | 2.202756 | GACGCCGTCCTCATCACC | 60.203 | 66.667 | 5.81 | 0.00 | 0.00 | 4.02 |
155 | 156 | 5.712919 | AAGCACTGGAGTGATCCAAAGGG | 62.713 | 52.174 | 11.06 | 0.00 | 44.74 | 3.95 |
156 | 157 | 2.553904 | AAGCACTGGAGTGATCCAAAGG | 60.554 | 50.000 | 11.06 | 0.00 | 44.74 | 3.11 |
157 | 158 | 2.787994 | AAGCACTGGAGTGATCCAAAG | 58.212 | 47.619 | 11.06 | 0.00 | 44.74 | 2.77 |
158 | 159 | 2.957402 | AAGCACTGGAGTGATCCAAA | 57.043 | 45.000 | 11.06 | 0.00 | 44.74 | 3.28 |
159 | 160 | 2.957402 | AAAGCACTGGAGTGATCCAA | 57.043 | 45.000 | 11.06 | 0.00 | 44.74 | 3.53 |
160 | 161 | 2.906389 | ACTAAAGCACTGGAGTGATCCA | 59.094 | 45.455 | 11.06 | 0.00 | 44.74 | 3.41 |
161 | 162 | 3.055819 | TGACTAAAGCACTGGAGTGATCC | 60.056 | 47.826 | 11.06 | 0.00 | 44.74 | 3.36 |
162 | 163 | 4.193826 | TGACTAAAGCACTGGAGTGATC | 57.806 | 45.455 | 11.06 | 0.00 | 44.74 | 2.92 |
166 | 167 | 3.077359 | GCAATGACTAAAGCACTGGAGT | 58.923 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
167 | 168 | 3.341823 | AGCAATGACTAAAGCACTGGAG | 58.658 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
168 | 169 | 3.423539 | AGCAATGACTAAAGCACTGGA | 57.576 | 42.857 | 0.00 | 0.00 | 0.00 | 3.86 |
169 | 170 | 4.002982 | TGTAGCAATGACTAAAGCACTGG | 58.997 | 43.478 | 0.00 | 0.00 | 0.00 | 4.00 |
170 | 171 | 5.049474 | TGTTGTAGCAATGACTAAAGCACTG | 60.049 | 40.000 | 0.00 | 0.00 | 0.00 | 3.66 |
171 | 172 | 5.063204 | TGTTGTAGCAATGACTAAAGCACT | 58.937 | 37.500 | 0.00 | 0.00 | 0.00 | 4.40 |
172 | 173 | 5.356882 | TGTTGTAGCAATGACTAAAGCAC | 57.643 | 39.130 | 0.00 | 0.00 | 0.00 | 4.40 |
173 | 174 | 5.106197 | CCATGTTGTAGCAATGACTAAAGCA | 60.106 | 40.000 | 0.00 | 0.00 | 0.00 | 3.91 |
174 | 175 | 5.123820 | TCCATGTTGTAGCAATGACTAAAGC | 59.876 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
175 | 176 | 6.741992 | TCCATGTTGTAGCAATGACTAAAG | 57.258 | 37.500 | 0.00 | 0.00 | 0.00 | 1.85 |
176 | 177 | 6.404623 | GCATCCATGTTGTAGCAATGACTAAA | 60.405 | 38.462 | 0.00 | 0.00 | 0.00 | 1.85 |
177 | 178 | 5.066375 | GCATCCATGTTGTAGCAATGACTAA | 59.934 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
178 | 179 | 4.576053 | GCATCCATGTTGTAGCAATGACTA | 59.424 | 41.667 | 0.00 | 0.00 | 0.00 | 2.59 |
179 | 180 | 3.379372 | GCATCCATGTTGTAGCAATGACT | 59.621 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
180 | 181 | 3.129113 | TGCATCCATGTTGTAGCAATGAC | 59.871 | 43.478 | 0.00 | 0.00 | 0.00 | 3.06 |
181 | 182 | 3.354467 | TGCATCCATGTTGTAGCAATGA | 58.646 | 40.909 | 0.00 | 0.00 | 0.00 | 2.57 |
182 | 183 | 3.786516 | TGCATCCATGTTGTAGCAATG | 57.213 | 42.857 | 0.00 | 0.00 | 0.00 | 2.82 |
183 | 184 | 4.647853 | AGAATGCATCCATGTTGTAGCAAT | 59.352 | 37.500 | 0.00 | 0.00 | 35.45 | 3.56 |
184 | 185 | 4.018490 | AGAATGCATCCATGTTGTAGCAA | 58.982 | 39.130 | 0.00 | 0.00 | 35.45 | 3.91 |
185 | 186 | 3.623703 | AGAATGCATCCATGTTGTAGCA | 58.376 | 40.909 | 0.00 | 0.00 | 36.34 | 3.49 |
186 | 187 | 4.644103 | AAGAATGCATCCATGTTGTAGC | 57.356 | 40.909 | 0.00 | 0.00 | 0.00 | 3.58 |
187 | 188 | 7.274904 | CAGAAAAAGAATGCATCCATGTTGTAG | 59.725 | 37.037 | 0.00 | 0.00 | 0.00 | 2.74 |
188 | 189 | 7.092079 | CAGAAAAAGAATGCATCCATGTTGTA | 58.908 | 34.615 | 0.00 | 0.00 | 0.00 | 2.41 |
189 | 190 | 5.929992 | CAGAAAAAGAATGCATCCATGTTGT | 59.070 | 36.000 | 0.00 | 0.00 | 0.00 | 3.32 |
190 | 191 | 5.929992 | ACAGAAAAAGAATGCATCCATGTTG | 59.070 | 36.000 | 0.00 | 0.00 | 0.00 | 3.33 |
191 | 192 | 5.929992 | CACAGAAAAAGAATGCATCCATGTT | 59.070 | 36.000 | 0.00 | 0.00 | 0.00 | 2.71 |
192 | 193 | 5.011329 | ACACAGAAAAAGAATGCATCCATGT | 59.989 | 36.000 | 0.00 | 0.00 | 0.00 | 3.21 |
193 | 194 | 5.475719 | ACACAGAAAAAGAATGCATCCATG | 58.524 | 37.500 | 0.00 | 0.00 | 0.00 | 3.66 |
194 | 195 | 5.733620 | ACACAGAAAAAGAATGCATCCAT | 57.266 | 34.783 | 0.00 | 0.00 | 0.00 | 3.41 |
195 | 196 | 5.534207 | AACACAGAAAAAGAATGCATCCA | 57.466 | 34.783 | 0.00 | 0.00 | 0.00 | 3.41 |
196 | 197 | 8.538409 | AATAAACACAGAAAAAGAATGCATCC | 57.462 | 30.769 | 0.00 | 0.00 | 0.00 | 3.51 |
231 | 232 | 0.676466 | TCTTTTCATCATGCCGCGGT | 60.676 | 50.000 | 28.70 | 4.23 | 0.00 | 5.68 |
234 | 235 | 1.334419 | CCGATCTTTTCATCATGCCGC | 60.334 | 52.381 | 0.00 | 0.00 | 0.00 | 6.53 |
235 | 236 | 2.212652 | TCCGATCTTTTCATCATGCCG | 58.787 | 47.619 | 0.00 | 0.00 | 0.00 | 5.69 |
294 | 296 | 5.025986 | TCGACGAATTTGTAAAGCTTTCC | 57.974 | 39.130 | 16.57 | 4.59 | 0.00 | 3.13 |
303 | 305 | 4.270084 | GCATCCATTCTCGACGAATTTGTA | 59.730 | 41.667 | 0.00 | 0.00 | 40.33 | 2.41 |
306 | 308 | 3.063997 | GTGCATCCATTCTCGACGAATTT | 59.936 | 43.478 | 0.00 | 0.00 | 40.33 | 1.82 |
330 | 333 | 2.967887 | AGCCCTGAAGAATTTGCAAACT | 59.032 | 40.909 | 15.41 | 2.40 | 0.00 | 2.66 |
373 | 377 | 3.967326 | TCTCTCTCCAGAAACCAGAAACA | 59.033 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
374 | 378 | 4.282195 | TCTCTCTCTCCAGAAACCAGAAAC | 59.718 | 45.833 | 0.00 | 0.00 | 0.00 | 2.78 |
375 | 379 | 4.483950 | TCTCTCTCTCCAGAAACCAGAAA | 58.516 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
376 | 380 | 4.085733 | CTCTCTCTCTCCAGAAACCAGAA | 58.914 | 47.826 | 0.00 | 0.00 | 0.00 | 3.02 |
377 | 381 | 3.075283 | ACTCTCTCTCTCCAGAAACCAGA | 59.925 | 47.826 | 0.00 | 0.00 | 0.00 | 3.86 |
378 | 382 | 3.193267 | CACTCTCTCTCTCCAGAAACCAG | 59.807 | 52.174 | 0.00 | 0.00 | 0.00 | 4.00 |
379 | 383 | 3.161067 | CACTCTCTCTCTCCAGAAACCA | 58.839 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
380 | 384 | 3.426615 | TCACTCTCTCTCTCCAGAAACC | 58.573 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
409 | 417 | 1.835531 | CCAACGTAGTACCCATCCCTT | 59.164 | 52.381 | 0.00 | 0.00 | 45.00 | 3.95 |
601 | 627 | 3.434319 | ACAGCTTCAATGCGGGCG | 61.434 | 61.111 | 0.00 | 0.00 | 38.13 | 6.13 |
636 | 662 | 3.152341 | CAAAGCAGTGGATCCAAAGAGT | 58.848 | 45.455 | 18.20 | 0.00 | 0.00 | 3.24 |
637 | 663 | 2.094854 | GCAAAGCAGTGGATCCAAAGAG | 60.095 | 50.000 | 18.20 | 7.80 | 0.00 | 2.85 |
638 | 664 | 1.888512 | GCAAAGCAGTGGATCCAAAGA | 59.111 | 47.619 | 18.20 | 0.00 | 0.00 | 2.52 |
640 | 666 | 1.614903 | CAGCAAAGCAGTGGATCCAAA | 59.385 | 47.619 | 18.20 | 0.00 | 0.00 | 3.28 |
641 | 667 | 1.250328 | CAGCAAAGCAGTGGATCCAA | 58.750 | 50.000 | 18.20 | 0.00 | 0.00 | 3.53 |
642 | 668 | 0.609957 | CCAGCAAAGCAGTGGATCCA | 60.610 | 55.000 | 11.44 | 11.44 | 32.60 | 3.41 |
643 | 669 | 0.322816 | TCCAGCAAAGCAGTGGATCC | 60.323 | 55.000 | 4.20 | 4.20 | 35.36 | 3.36 |
760 | 832 | 1.672356 | CTTGGAAGGCACGGACAGG | 60.672 | 63.158 | 0.00 | 0.00 | 0.00 | 4.00 |
816 | 893 | 3.175152 | CAGTGCTAGTGCTACTTCTTCG | 58.825 | 50.000 | 0.00 | 0.00 | 40.48 | 3.79 |
817 | 894 | 2.926838 | GCAGTGCTAGTGCTACTTCTTC | 59.073 | 50.000 | 8.18 | 0.00 | 41.22 | 2.87 |
818 | 895 | 2.300152 | TGCAGTGCTAGTGCTACTTCTT | 59.700 | 45.455 | 17.60 | 0.00 | 44.61 | 2.52 |
819 | 896 | 1.895798 | TGCAGTGCTAGTGCTACTTCT | 59.104 | 47.619 | 17.60 | 0.00 | 44.61 | 2.85 |
822 | 899 | 3.340814 | AAATGCAGTGCTAGTGCTACT | 57.659 | 42.857 | 17.60 | 0.00 | 44.61 | 2.57 |
823 | 900 | 3.436704 | TGAAAATGCAGTGCTAGTGCTAC | 59.563 | 43.478 | 17.60 | 1.45 | 44.61 | 3.58 |
824 | 901 | 3.436704 | GTGAAAATGCAGTGCTAGTGCTA | 59.563 | 43.478 | 17.60 | 0.00 | 44.61 | 3.49 |
825 | 902 | 2.227388 | GTGAAAATGCAGTGCTAGTGCT | 59.773 | 45.455 | 17.60 | 0.00 | 44.61 | 4.40 |
826 | 903 | 2.030893 | TGTGAAAATGCAGTGCTAGTGC | 60.031 | 45.455 | 17.60 | 8.48 | 44.57 | 4.40 |
827 | 904 | 3.902261 | TGTGAAAATGCAGTGCTAGTG | 57.098 | 42.857 | 17.60 | 0.00 | 0.00 | 2.74 |
828 | 905 | 4.082571 | GGATTGTGAAAATGCAGTGCTAGT | 60.083 | 41.667 | 17.60 | 0.00 | 0.00 | 2.57 |
829 | 906 | 4.082625 | TGGATTGTGAAAATGCAGTGCTAG | 60.083 | 41.667 | 17.60 | 0.00 | 0.00 | 3.42 |
905 | 982 | 4.037446 | TGCGCTTGATTTAGGAAACAACTT | 59.963 | 37.500 | 9.73 | 0.00 | 0.00 | 2.66 |
911 | 988 | 4.941263 | ACATACTGCGCTTGATTTAGGAAA | 59.059 | 37.500 | 9.73 | 0.00 | 0.00 | 3.13 |
958 | 1063 | 1.200716 | CTGCACCACATTCACATCCAC | 59.799 | 52.381 | 0.00 | 0.00 | 0.00 | 4.02 |
1312 | 1460 | 6.687081 | ACAATCTGCTGAGTACTACTACTC | 57.313 | 41.667 | 0.00 | 3.34 | 46.56 | 2.59 |
1317 | 1465 | 9.058174 | TCTAATCTACAATCTGCTGAGTACTAC | 57.942 | 37.037 | 0.00 | 0.00 | 0.00 | 2.73 |
1318 | 1466 | 9.278978 | CTCTAATCTACAATCTGCTGAGTACTA | 57.721 | 37.037 | 0.00 | 0.00 | 0.00 | 1.82 |
1319 | 1467 | 7.255451 | GCTCTAATCTACAATCTGCTGAGTACT | 60.255 | 40.741 | 0.00 | 0.00 | 0.00 | 2.73 |
1360 | 1508 | 7.867752 | AGAACTAAATCACTACTAGCTCGATC | 58.132 | 38.462 | 0.00 | 0.00 | 0.00 | 3.69 |
1361 | 1509 | 7.811117 | AGAACTAAATCACTACTAGCTCGAT | 57.189 | 36.000 | 0.00 | 0.00 | 0.00 | 3.59 |
1362 | 1510 | 7.986320 | AGTAGAACTAAATCACTACTAGCTCGA | 59.014 | 37.037 | 0.00 | 0.00 | 42.09 | 4.04 |
1363 | 1511 | 8.145316 | AGTAGAACTAAATCACTACTAGCTCG | 57.855 | 38.462 | 0.00 | 0.00 | 42.09 | 5.03 |
1395 | 1553 | 5.582665 | CACTACCACTTCCTCTTGCTAAATC | 59.417 | 44.000 | 0.00 | 0.00 | 0.00 | 2.17 |
1396 | 1554 | 5.248477 | TCACTACCACTTCCTCTTGCTAAAT | 59.752 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
1403 | 1561 | 2.237392 | GCCATCACTACCACTTCCTCTT | 59.763 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
1413 | 1571 | 0.598680 | CGCTAGCTGCCATCACTACC | 60.599 | 60.000 | 13.93 | 0.00 | 38.78 | 3.18 |
1465 | 1627 | 0.749649 | AACAAGAAATGGCGCCACAA | 59.250 | 45.000 | 35.50 | 10.08 | 0.00 | 3.33 |
1508 | 1675 | 1.003851 | TACGCTACGTACGTACCCAC | 58.996 | 55.000 | 23.60 | 12.30 | 44.55 | 4.61 |
1529 | 1702 | 6.536582 | CCATCTTTCATGTTACTGGTAGTCTG | 59.463 | 42.308 | 0.00 | 0.00 | 0.00 | 3.51 |
1550 | 1754 | 5.229469 | CAGTACTCGAATAACGTGAACCATC | 59.771 | 44.000 | 0.00 | 0.00 | 43.13 | 3.51 |
1551 | 1755 | 5.100259 | CAGTACTCGAATAACGTGAACCAT | 58.900 | 41.667 | 0.00 | 0.00 | 43.13 | 3.55 |
1552 | 1756 | 4.478699 | CAGTACTCGAATAACGTGAACCA | 58.521 | 43.478 | 0.00 | 0.00 | 43.13 | 3.67 |
1553 | 1757 | 3.855950 | CCAGTACTCGAATAACGTGAACC | 59.144 | 47.826 | 0.00 | 0.00 | 43.13 | 3.62 |
1554 | 1758 | 3.302699 | GCCAGTACTCGAATAACGTGAAC | 59.697 | 47.826 | 0.00 | 0.00 | 43.13 | 3.18 |
1555 | 1759 | 3.504863 | GCCAGTACTCGAATAACGTGAA | 58.495 | 45.455 | 0.00 | 0.00 | 43.13 | 3.18 |
1556 | 1760 | 2.476686 | CGCCAGTACTCGAATAACGTGA | 60.477 | 50.000 | 0.00 | 0.00 | 43.13 | 4.35 |
1557 | 1761 | 1.844357 | CGCCAGTACTCGAATAACGTG | 59.156 | 52.381 | 0.00 | 0.00 | 43.13 | 4.49 |
1558 | 1762 | 1.739466 | TCGCCAGTACTCGAATAACGT | 59.261 | 47.619 | 4.33 | 0.00 | 43.13 | 3.99 |
1559 | 1763 | 2.463553 | TCGCCAGTACTCGAATAACG | 57.536 | 50.000 | 4.33 | 0.00 | 44.09 | 3.18 |
1560 | 1764 | 5.519206 | AGATTTTCGCCAGTACTCGAATAAC | 59.481 | 40.000 | 17.13 | 12.31 | 43.09 | 1.89 |
1561 | 1765 | 5.518847 | CAGATTTTCGCCAGTACTCGAATAA | 59.481 | 40.000 | 17.13 | 14.29 | 43.09 | 1.40 |
1562 | 1766 | 5.041287 | CAGATTTTCGCCAGTACTCGAATA | 58.959 | 41.667 | 17.13 | 13.74 | 43.09 | 1.75 |
1563 | 1767 | 3.865745 | CAGATTTTCGCCAGTACTCGAAT | 59.134 | 43.478 | 17.13 | 6.43 | 43.09 | 3.34 |
1564 | 1768 | 3.250744 | CAGATTTTCGCCAGTACTCGAA | 58.749 | 45.455 | 13.62 | 13.62 | 42.11 | 3.71 |
1565 | 1769 | 2.876091 | CAGATTTTCGCCAGTACTCGA | 58.124 | 47.619 | 2.76 | 2.76 | 0.00 | 4.04 |
1566 | 1770 | 1.324736 | GCAGATTTTCGCCAGTACTCG | 59.675 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
1567 | 1771 | 2.346803 | TGCAGATTTTCGCCAGTACTC | 58.653 | 47.619 | 0.00 | 0.00 | 0.00 | 2.59 |
1568 | 1772 | 2.289694 | ACTGCAGATTTTCGCCAGTACT | 60.290 | 45.455 | 23.35 | 0.00 | 33.26 | 2.73 |
1569 | 1773 | 2.076863 | ACTGCAGATTTTCGCCAGTAC | 58.923 | 47.619 | 23.35 | 0.00 | 33.26 | 2.73 |
1570 | 1774 | 2.472695 | ACTGCAGATTTTCGCCAGTA | 57.527 | 45.000 | 23.35 | 0.00 | 33.26 | 2.74 |
1571 | 1775 | 1.609208 | AACTGCAGATTTTCGCCAGT | 58.391 | 45.000 | 23.35 | 0.00 | 35.31 | 4.00 |
1572 | 1776 | 2.712057 | AAACTGCAGATTTTCGCCAG | 57.288 | 45.000 | 23.35 | 0.00 | 0.00 | 4.85 |
1573 | 1777 | 4.022416 | ACATTAAACTGCAGATTTTCGCCA | 60.022 | 37.500 | 23.35 | 0.00 | 0.00 | 5.69 |
1574 | 1778 | 4.324402 | CACATTAAACTGCAGATTTTCGCC | 59.676 | 41.667 | 23.35 | 0.00 | 0.00 | 5.54 |
1575 | 1779 | 5.153513 | TCACATTAAACTGCAGATTTTCGC | 58.846 | 37.500 | 23.35 | 0.00 | 0.00 | 4.70 |
1576 | 1780 | 6.636447 | TGTTCACATTAAACTGCAGATTTTCG | 59.364 | 34.615 | 23.35 | 8.87 | 0.00 | 3.46 |
1577 | 1781 | 7.928908 | TGTTCACATTAAACTGCAGATTTTC | 57.071 | 32.000 | 23.35 | 0.00 | 0.00 | 2.29 |
1578 | 1782 | 8.891671 | ATTGTTCACATTAAACTGCAGATTTT | 57.108 | 26.923 | 23.35 | 14.01 | 0.00 | 1.82 |
1579 | 1783 | 8.891671 | AATTGTTCACATTAAACTGCAGATTT | 57.108 | 26.923 | 23.35 | 18.30 | 0.00 | 2.17 |
1580 | 1784 | 9.630098 | CTAATTGTTCACATTAAACTGCAGATT | 57.370 | 29.630 | 23.35 | 18.24 | 0.00 | 2.40 |
1586 | 1790 | 8.500837 | TTTCGCTAATTGTTCACATTAAACTG | 57.499 | 30.769 | 0.00 | 0.00 | 0.00 | 3.16 |
1605 | 1809 | 8.169268 | CGTATTTGTAAAAGAGAGATTTTCGCT | 58.831 | 33.333 | 0.00 | 0.00 | 37.57 | 4.93 |
1628 | 1832 | 3.372660 | TTGCATATACATCACGCCGTA | 57.627 | 42.857 | 0.00 | 0.00 | 0.00 | 4.02 |
1679 | 1883 | 2.155279 | GGAGCCTCACTTTCTGAAACC | 58.845 | 52.381 | 0.00 | 0.00 | 0.00 | 3.27 |
1684 | 1888 | 1.338579 | GGTCAGGAGCCTCACTTTCTG | 60.339 | 57.143 | 0.00 | 0.00 | 33.70 | 3.02 |
1691 | 1895 | 1.860641 | TATTTCGGTCAGGAGCCTCA | 58.139 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
1719 | 1923 | 2.974698 | AGTCCGCAAGTGCAGCAC | 60.975 | 61.111 | 18.55 | 18.55 | 42.21 | 4.40 |
1724 | 1928 | 2.970974 | GCCTTCAGTCCGCAAGTGC | 61.971 | 63.158 | 0.00 | 0.00 | 37.78 | 4.40 |
1730 | 1934 | 0.178068 | TCCTTATGCCTTCAGTCCGC | 59.822 | 55.000 | 0.00 | 0.00 | 0.00 | 5.54 |
1743 | 1947 | 6.349300 | ACTTTGCGTGTAGATGATTCCTTAT | 58.651 | 36.000 | 0.00 | 0.00 | 0.00 | 1.73 |
1745 | 1949 | 4.579869 | ACTTTGCGTGTAGATGATTCCTT | 58.420 | 39.130 | 0.00 | 0.00 | 0.00 | 3.36 |
1746 | 1950 | 4.207891 | ACTTTGCGTGTAGATGATTCCT | 57.792 | 40.909 | 0.00 | 0.00 | 0.00 | 3.36 |
1747 | 1951 | 4.946784 | AACTTTGCGTGTAGATGATTCC | 57.053 | 40.909 | 0.00 | 0.00 | 0.00 | 3.01 |
1776 | 1980 | 1.812571 | AGCTTATGCCTTCGTTTGTGG | 59.187 | 47.619 | 0.00 | 0.00 | 40.80 | 4.17 |
1778 | 1982 | 3.857010 | GCAAAGCTTATGCCTTCGTTTGT | 60.857 | 43.478 | 17.56 | 0.00 | 40.80 | 2.83 |
1779 | 1983 | 2.663119 | GCAAAGCTTATGCCTTCGTTTG | 59.337 | 45.455 | 17.56 | 3.01 | 40.80 | 2.93 |
1780 | 1984 | 2.946564 | GCAAAGCTTATGCCTTCGTTT | 58.053 | 42.857 | 17.56 | 0.00 | 40.80 | 3.60 |
1781 | 1985 | 2.636768 | GCAAAGCTTATGCCTTCGTT | 57.363 | 45.000 | 17.56 | 0.00 | 40.80 | 3.85 |
1823 | 2071 | 7.007723 | TGGGTGGTGTAACAAATTCTATTCTT | 58.992 | 34.615 | 0.00 | 0.00 | 39.98 | 2.52 |
1832 | 2080 | 5.066764 | GCGTAATATGGGTGGTGTAACAAAT | 59.933 | 40.000 | 0.00 | 0.00 | 39.98 | 2.32 |
1920 | 2172 | 2.037121 | TGATGTGGCAGAACGAGAGAAA | 59.963 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
1927 | 2179 | 2.401766 | GGGCTGATGTGGCAGAACG | 61.402 | 63.158 | 0.00 | 0.00 | 38.14 | 3.95 |
1949 | 2201 | 3.074412 | CAAGTGTTACGGAAAGGATGCT | 58.926 | 45.455 | 0.00 | 0.00 | 0.00 | 3.79 |
2012 | 2303 | 1.380524 | CGGTCGGAGTGTGAGATAGT | 58.619 | 55.000 | 0.00 | 0.00 | 0.00 | 2.12 |
2013 | 2304 | 0.029567 | GCGGTCGGAGTGTGAGATAG | 59.970 | 60.000 | 0.00 | 0.00 | 0.00 | 2.08 |
2014 | 2305 | 1.381928 | GGCGGTCGGAGTGTGAGATA | 61.382 | 60.000 | 0.00 | 0.00 | 0.00 | 1.98 |
2024 | 2315 | 3.547054 | AAATTTACTATGGCGGTCGGA | 57.453 | 42.857 | 0.00 | 0.00 | 0.00 | 4.55 |
2047 | 2338 | 3.991536 | GAGAGTTGGGAGCGGCGAC | 62.992 | 68.421 | 12.98 | 3.05 | 0.00 | 5.19 |
2050 | 2341 | 2.185608 | GAGAGAGTTGGGAGCGGC | 59.814 | 66.667 | 0.00 | 0.00 | 0.00 | 6.53 |
2056 | 2347 | 1.213013 | CGTGACGGAGAGAGTTGGG | 59.787 | 63.158 | 0.00 | 0.00 | 0.00 | 4.12 |
2065 | 2356 | 3.036783 | GAGGACGGTCGTGACGGAG | 62.037 | 68.421 | 8.23 | 0.00 | 35.84 | 4.63 |
2075 | 2366 | 2.190756 | GTCAATCGGAGAGGACGGT | 58.809 | 57.895 | 0.00 | 0.00 | 43.63 | 4.83 |
2121 | 2412 | 2.740826 | TGCGTTTACTGCTCGGCC | 60.741 | 61.111 | 0.00 | 0.00 | 0.00 | 6.13 |
2131 | 2422 | 0.663688 | AACAACATGCCGTGCGTTTA | 59.336 | 45.000 | 0.00 | 0.00 | 0.00 | 2.01 |
2132 | 2423 | 0.869454 | CAACAACATGCCGTGCGTTT | 60.869 | 50.000 | 0.00 | 0.00 | 0.00 | 3.60 |
2133 | 2424 | 1.299014 | CAACAACATGCCGTGCGTT | 60.299 | 52.632 | 0.00 | 0.00 | 0.00 | 4.84 |
2172 | 2463 | 0.898320 | ACGGTGATGGAGAGAGTTGG | 59.102 | 55.000 | 0.00 | 0.00 | 0.00 | 3.77 |
2194 | 2485 | 2.743718 | CCACCAAGAGGACAGCGT | 59.256 | 61.111 | 0.00 | 0.00 | 38.69 | 5.07 |
2198 | 2489 | 2.121963 | AGGCCCACCAAGAGGACA | 60.122 | 61.111 | 0.00 | 0.00 | 39.06 | 4.02 |
2204 | 2495 | 0.183731 | GGATAAGGAGGCCCACCAAG | 59.816 | 60.000 | 17.23 | 0.00 | 39.06 | 3.61 |
2205 | 2496 | 0.551377 | TGGATAAGGAGGCCCACCAA | 60.551 | 55.000 | 17.23 | 6.71 | 39.06 | 3.67 |
2206 | 2497 | 0.328450 | ATGGATAAGGAGGCCCACCA | 60.328 | 55.000 | 17.23 | 8.93 | 39.06 | 4.17 |
2208 | 2499 | 1.202940 | GGAATGGATAAGGAGGCCCAC | 60.203 | 57.143 | 0.00 | 0.00 | 33.88 | 4.61 |
2209 | 2500 | 1.149101 | GGAATGGATAAGGAGGCCCA | 58.851 | 55.000 | 0.00 | 0.00 | 33.88 | 5.36 |
2210 | 2501 | 1.352687 | GAGGAATGGATAAGGAGGCCC | 59.647 | 57.143 | 0.00 | 0.00 | 0.00 | 5.80 |
2211 | 2502 | 2.343625 | AGAGGAATGGATAAGGAGGCC | 58.656 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
2212 | 2503 | 3.650461 | AGAAGAGGAATGGATAAGGAGGC | 59.350 | 47.826 | 0.00 | 0.00 | 0.00 | 4.70 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.