Multiple sequence alignment - TraesCS6B01G405600
Loading Multiple Alignment...
BLAST Results
BLAST Results - Input Sequence
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this
to extract flanking regions for cloning. If the result of the multiple sequence alignment is
not as expected, these results could be used for further investigation.
qseqid
sseqid
percentage.identical
alignment.length
no.mismatch
no.gap.openings
qstart
qend
sstart
send
evalue
bitscore
0
TraesCS6B01G405600
chr6B
100.000
2717
0
0
1
2717
680724260
680726976
0.000000e+00
5018.0
1
TraesCS6B01G405600
chr6D
90.826
1210
62
10
912
2095
448810115
448811301
0.000000e+00
1574.0
2
TraesCS6B01G405600
chr6D
90.476
294
24
3
2094
2383
448812754
448813047
4.240000e-103
385.0
3
TraesCS6B01G405600
chr6D
97.838
185
4
0
359
543
448809398
448809582
1.210000e-83
320.0
4
TraesCS6B01G405600
chr6D
87.361
269
21
5
651
907
448809812
448810079
2.050000e-76
296.0
5
TraesCS6B01G405600
chr6D
93.467
199
7
3
2378
2570
448616365
448616167
9.520000e-75
291.0
6
TraesCS6B01G405600
chr6D
93.069
202
8
3
2375
2570
448902912
448903113
9.520000e-75
291.0
7
TraesCS6B01G405600
chr6D
94.737
133
7
0
2575
2707
448615994
448615862
9.860000e-50
207.0
8
TraesCS6B01G405600
chr6D
94.118
136
8
0
2572
2707
448903283
448903418
9.860000e-50
207.0
9
TraesCS6B01G405600
chr6D
95.902
122
5
0
534
655
448809613
448809734
5.930000e-47
198.0
10
TraesCS6B01G405600
chr6A
95.504
823
36
1
912
1733
594958653
594959475
0.000000e+00
1314.0
11
TraesCS6B01G405600
chr6A
90.075
665
49
5
1734
2383
594959536
594960198
0.000000e+00
846.0
12
TraesCS6B01G405600
chr6A
88.715
576
34
16
359
907
594958046
594958617
0.000000e+00
675.0
13
TraesCS6B01G405600
chr6A
95.918
196
8
0
2375
2570
594979343
594979538
4.370000e-83
318.0
14
TraesCS6B01G405600
chr6A
94.512
164
7
1
205
366
222682673
222682836
4.490000e-63
252.0
15
TraesCS6B01G405600
chr6A
93.939
165
8
1
206
368
109115424
109115260
5.810000e-62
248.0
16
TraesCS6B01G405600
chr6A
95.070
142
7
0
2572
2713
594979712
594979853
9.790000e-55
224.0
17
TraesCS6B01G405600
chr6A
82.209
163
20
5
2374
2536
595171930
595171777
6.100000e-27
132.0
18
TraesCS6B01G405600
chr6A
81.379
145
23
3
2575
2716
595171582
595171439
6.150000e-22
115.0
19
TraesCS6B01G405600
chr2A
77.002
487
94
13
1140
1620
187203971
187204445
2.070000e-66
263.0
20
TraesCS6B01G405600
chr3A
96.053
152
4
1
210
359
429460899
429461050
2.090000e-61
246.0
21
TraesCS6B01G405600
chr3A
82.883
111
11
6
1148
1251
655727507
655727616
2.880000e-15
93.5
22
TraesCS6B01G405600
chr5B
96.000
150
4
1
211
358
652825070
652825219
2.700000e-60
243.0
23
TraesCS6B01G405600
chr5B
76.812
345
65
11
1148
1486
578815554
578815889
2.150000e-41
180.0
24
TraesCS6B01G405600
chr3B
95.425
153
5
1
209
359
824153994
824153842
2.700000e-60
243.0
25
TraesCS6B01G405600
chr3B
72.222
486
115
18
1148
1620
685227502
685227980
6.100000e-27
132.0
26
TraesCS6B01G405600
chr2B
96.000
150
4
1
211
358
273752549
273752400
2.700000e-60
243.0
27
TraesCS6B01G405600
chr2B
94.771
153
6
1
208
358
169501452
169501300
1.260000e-58
237.0
28
TraesCS6B01G405600
chr2B
75.468
481
103
15
1148
1622
248690846
248691317
1.270000e-53
220.0
29
TraesCS6B01G405600
chr1B
94.268
157
7
1
204
358
101247630
101247786
3.500000e-59
239.0
30
TraesCS6B01G405600
chr7B
94.737
152
6
1
209
358
40085987
40086138
4.520000e-58
235.0
31
TraesCS6B01G405600
chr5A
84.685
111
17
0
1379
1489
591977242
591977352
7.950000e-21
111.0
BLAST Results - HSPs grouped
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the
BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are
purely upstream or downstream may be removed if they don't overlap both primers.
query
scaffold
start
end
length
rev.comp
avg.bitscore
max.bitscore
avg.percent.identical
query.start
query.end
num_hsp
groupid
homo_length
0
TraesCS6B01G405600
chr6B
680724260
680726976
2716
False
5018.0
5018
100.000000
1
2717
1
chr6B.!!$F1
2716
1
TraesCS6B01G405600
chr6D
448809398
448813047
3649
False
554.6
1574
92.480600
359
2383
5
chr6D.!!$F1
2024
2
TraesCS6B01G405600
chr6D
448615862
448616365
503
True
249.0
291
94.102000
2378
2707
2
chr6D.!!$R1
329
3
TraesCS6B01G405600
chr6D
448902912
448903418
506
False
249.0
291
93.593500
2375
2707
2
chr6D.!!$F2
332
4
TraesCS6B01G405600
chr6A
594958046
594960198
2152
False
945.0
1314
91.431333
359
2383
3
chr6A.!!$F2
2024
5
TraesCS6B01G405600
chr6A
594979343
594979853
510
False
271.0
318
95.494000
2375
2713
2
chr6A.!!$F3
338
AutoCloner calculated primer pairs
These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3),
whilst remaining within the specified product range where possible.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
328
329
0.025513
GCATCGTTCATCTGTCGTGC
59.974
55.0
0.0
0.0
0.0
5.34
F
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
1842
2092
0.107945
GCTGCCTTGTCCTGGACTAG
60.108
60.0
25.32
25.32
35.74
2.57
R
All possible primers
Listed here are all possible primers based on the multiple sequence alignment and SNPs generated
previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work
during PCR or sequencing,
these could be used as alternatives.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
20
21
1.780503
ACCTTGCCATTAATCCCTGC
58.219
50.000
0.00
0.00
0.00
4.85
21
22
1.043022
CCTTGCCATTAATCCCTGCC
58.957
55.000
0.00
0.00
0.00
4.85
22
23
1.043022
CTTGCCATTAATCCCTGCCC
58.957
55.000
0.00
0.00
0.00
5.36
23
24
0.636101
TTGCCATTAATCCCTGCCCT
59.364
50.000
0.00
0.00
0.00
5.19
24
25
1.528600
TGCCATTAATCCCTGCCCTA
58.471
50.000
0.00
0.00
0.00
3.53
25
26
1.856259
TGCCATTAATCCCTGCCCTAA
59.144
47.619
0.00
0.00
0.00
2.69
26
27
2.450500
TGCCATTAATCCCTGCCCTAAT
59.549
45.455
0.00
0.00
0.00
1.73
27
28
2.827921
GCCATTAATCCCTGCCCTAATG
59.172
50.000
0.00
0.00
33.45
1.90
28
29
3.434309
CCATTAATCCCTGCCCTAATGG
58.566
50.000
5.55
5.55
42.49
3.16
29
30
4.387026
CATTAATCCCTGCCCTAATGGA
57.613
45.455
0.00
0.00
35.39
3.41
30
31
4.939255
CATTAATCCCTGCCCTAATGGAT
58.061
43.478
0.00
0.00
39.26
3.41
31
32
6.078456
CATTAATCCCTGCCCTAATGGATA
57.922
41.667
0.00
0.00
36.60
2.59
32
33
6.676558
CATTAATCCCTGCCCTAATGGATAT
58.323
40.000
0.00
0.00
36.60
1.63
33
34
4.598036
AATCCCTGCCCTAATGGATATG
57.402
45.455
0.00
0.00
36.60
1.78
34
35
2.278245
TCCCTGCCCTAATGGATATGG
58.722
52.381
0.00
0.00
35.39
2.74
35
36
2.157864
TCCCTGCCCTAATGGATATGGA
60.158
50.000
0.00
0.00
35.39
3.41
36
37
2.025887
CCCTGCCCTAATGGATATGGAC
60.026
54.545
0.00
0.00
35.39
4.02
37
38
2.355108
CCTGCCCTAATGGATATGGACG
60.355
54.545
0.00
0.00
35.39
4.79
38
39
2.303022
CTGCCCTAATGGATATGGACGT
59.697
50.000
0.00
0.00
35.39
4.34
39
40
2.038426
TGCCCTAATGGATATGGACGTG
59.962
50.000
0.00
0.00
35.39
4.49
40
41
2.615493
GCCCTAATGGATATGGACGTGG
60.615
54.545
0.00
0.00
35.39
4.94
41
42
2.903784
CCCTAATGGATATGGACGTGGA
59.096
50.000
0.00
0.00
35.39
4.02
42
43
3.055819
CCCTAATGGATATGGACGTGGAG
60.056
52.174
0.00
0.00
35.39
3.86
43
44
2.550830
AATGGATATGGACGTGGAGC
57.449
50.000
0.00
0.00
0.00
4.70
44
45
6.925561
CCTAATGGATATGGACGTGGAGCG
62.926
54.167
0.00
0.00
40.48
5.03
45
46
1.664965
GGATATGGACGTGGAGCGC
60.665
63.158
0.00
0.00
46.11
5.92
46
47
1.067416
GATATGGACGTGGAGCGCA
59.933
57.895
11.47
0.00
46.11
6.09
47
48
0.941463
GATATGGACGTGGAGCGCAG
60.941
60.000
11.47
0.00
46.11
5.18
60
61
3.573558
CGCAGCCACGTTATTGGT
58.426
55.556
0.00
0.00
39.09
3.67
61
62
2.757212
CGCAGCCACGTTATTGGTA
58.243
52.632
0.00
0.00
39.09
3.25
62
63
1.295792
CGCAGCCACGTTATTGGTAT
58.704
50.000
0.00
0.00
39.09
2.73
63
64
1.668751
CGCAGCCACGTTATTGGTATT
59.331
47.619
0.00
0.00
39.09
1.89
64
65
2.286184
CGCAGCCACGTTATTGGTATTC
60.286
50.000
0.00
0.00
39.09
1.75
65
66
2.943033
GCAGCCACGTTATTGGTATTCT
59.057
45.455
0.00
0.00
39.09
2.40
66
67
3.002348
GCAGCCACGTTATTGGTATTCTC
59.998
47.826
0.00
0.00
39.09
2.87
67
68
3.560068
CAGCCACGTTATTGGTATTCTCC
59.440
47.826
0.00
0.00
39.09
3.71
68
69
3.454812
AGCCACGTTATTGGTATTCTCCT
59.545
43.478
0.00
0.00
39.09
3.69
69
70
4.080526
AGCCACGTTATTGGTATTCTCCTT
60.081
41.667
0.00
0.00
39.09
3.36
70
71
4.638865
GCCACGTTATTGGTATTCTCCTTT
59.361
41.667
0.00
0.00
39.09
3.11
71
72
5.124936
GCCACGTTATTGGTATTCTCCTTTT
59.875
40.000
0.00
0.00
39.09
2.27
72
73
6.349860
GCCACGTTATTGGTATTCTCCTTTTT
60.350
38.462
0.00
0.00
39.09
1.94
96
97
6.997239
TTTTCTCAGGAGTCATGATTCATG
57.003
37.500
22.48
22.48
42.60
3.07
97
98
5.688814
TTCTCAGGAGTCATGATTCATGT
57.311
39.130
25.75
7.84
41.98
3.21
98
99
5.019785
TCTCAGGAGTCATGATTCATGTG
57.980
43.478
25.75
23.61
41.98
3.21
99
100
4.468868
TCTCAGGAGTCATGATTCATGTGT
59.531
41.667
25.75
13.12
41.98
3.72
100
101
4.510571
TCAGGAGTCATGATTCATGTGTG
58.489
43.478
25.75
14.62
41.98
3.82
101
102
4.019950
TCAGGAGTCATGATTCATGTGTGT
60.020
41.667
25.75
8.87
41.98
3.72
102
103
4.094442
CAGGAGTCATGATTCATGTGTGTG
59.906
45.833
20.82
12.87
41.98
3.82
103
104
4.005650
GGAGTCATGATTCATGTGTGTGT
58.994
43.478
22.64
5.91
41.98
3.72
104
105
4.142752
GGAGTCATGATTCATGTGTGTGTG
60.143
45.833
22.64
0.50
41.98
3.82
105
106
4.392047
AGTCATGATTCATGTGTGTGTGT
58.608
39.130
22.64
1.75
41.98
3.72
106
107
4.214758
AGTCATGATTCATGTGTGTGTGTG
59.785
41.667
22.64
0.00
41.98
3.82
107
108
4.023792
GTCATGATTCATGTGTGTGTGTGT
60.024
41.667
22.64
0.00
41.98
3.72
108
109
3.967203
TGATTCATGTGTGTGTGTGTG
57.033
42.857
0.00
0.00
0.00
3.82
109
110
3.277715
TGATTCATGTGTGTGTGTGTGT
58.722
40.909
0.00
0.00
0.00
3.72
110
111
3.065095
TGATTCATGTGTGTGTGTGTGTG
59.935
43.478
0.00
0.00
0.00
3.82
111
112
2.106477
TCATGTGTGTGTGTGTGTGT
57.894
45.000
0.00
0.00
0.00
3.72
112
113
3.252974
TCATGTGTGTGTGTGTGTGTA
57.747
42.857
0.00
0.00
0.00
2.90
113
114
3.802866
TCATGTGTGTGTGTGTGTGTAT
58.197
40.909
0.00
0.00
0.00
2.29
114
115
4.950050
TCATGTGTGTGTGTGTGTGTATA
58.050
39.130
0.00
0.00
0.00
1.47
115
116
5.546526
TCATGTGTGTGTGTGTGTGTATAT
58.453
37.500
0.00
0.00
0.00
0.86
116
117
6.692486
TCATGTGTGTGTGTGTGTGTATATA
58.308
36.000
0.00
0.00
0.00
0.86
117
118
7.327214
TCATGTGTGTGTGTGTGTGTATATAT
58.673
34.615
0.00
0.00
0.00
0.86
118
119
8.470805
TCATGTGTGTGTGTGTGTGTATATATA
58.529
33.333
0.00
0.00
0.00
0.86
119
120
9.260002
CATGTGTGTGTGTGTGTGTATATATAT
57.740
33.333
0.00
0.00
0.00
0.86
142
143
5.861222
ATATATGTGTGTGTGTGTGTGTG
57.139
39.130
0.00
0.00
0.00
3.82
143
144
1.819928
ATGTGTGTGTGTGTGTGTGT
58.180
45.000
0.00
0.00
0.00
3.72
144
145
0.871057
TGTGTGTGTGTGTGTGTGTG
59.129
50.000
0.00
0.00
0.00
3.82
145
146
0.871722
GTGTGTGTGTGTGTGTGTGT
59.128
50.000
0.00
0.00
0.00
3.72
146
147
0.871057
TGTGTGTGTGTGTGTGTGTG
59.129
50.000
0.00
0.00
0.00
3.82
147
148
0.871722
GTGTGTGTGTGTGTGTGTGT
59.128
50.000
0.00
0.00
0.00
3.72
148
149
0.871057
TGTGTGTGTGTGTGTGTGTG
59.129
50.000
0.00
0.00
0.00
3.82
149
150
0.871722
GTGTGTGTGTGTGTGTGTGT
59.128
50.000
0.00
0.00
0.00
3.72
150
151
0.871057
TGTGTGTGTGTGTGTGTGTG
59.129
50.000
0.00
0.00
0.00
3.82
151
152
0.871722
GTGTGTGTGTGTGTGTGTGT
59.128
50.000
0.00
0.00
0.00
3.72
152
153
0.871057
TGTGTGTGTGTGTGTGTGTG
59.129
50.000
0.00
0.00
0.00
3.82
153
154
0.871722
GTGTGTGTGTGTGTGTGTGT
59.128
50.000
0.00
0.00
0.00
3.72
154
155
0.871057
TGTGTGTGTGTGTGTGTGTG
59.129
50.000
0.00
0.00
0.00
3.82
155
156
0.871722
GTGTGTGTGTGTGTGTGTGT
59.128
50.000
0.00
0.00
0.00
3.72
156
157
0.871057
TGTGTGTGTGTGTGTGTGTG
59.129
50.000
0.00
0.00
0.00
3.82
157
158
0.871722
GTGTGTGTGTGTGTGTGTGT
59.128
50.000
0.00
0.00
0.00
3.72
158
159
0.871057
TGTGTGTGTGTGTGTGTGTG
59.129
50.000
0.00
0.00
0.00
3.82
159
160
0.871722
GTGTGTGTGTGTGTGTGTGT
59.128
50.000
0.00
0.00
0.00
3.72
160
161
0.871057
TGTGTGTGTGTGTGTGTGTG
59.129
50.000
0.00
0.00
0.00
3.82
161
162
0.871722
GTGTGTGTGTGTGTGTGTGT
59.128
50.000
0.00
0.00
0.00
3.72
162
163
0.871057
TGTGTGTGTGTGTGTGTGTG
59.129
50.000
0.00
0.00
0.00
3.82
163
164
0.871722
GTGTGTGTGTGTGTGTGTGT
59.128
50.000
0.00
0.00
0.00
3.72
164
165
0.871057
TGTGTGTGTGTGTGTGTGTG
59.129
50.000
0.00
0.00
0.00
3.82
165
166
0.871722
GTGTGTGTGTGTGTGTGTGT
59.128
50.000
0.00
0.00
0.00
3.72
166
167
0.871057
TGTGTGTGTGTGTGTGTGTG
59.129
50.000
0.00
0.00
0.00
3.82
167
168
0.871722
GTGTGTGTGTGTGTGTGTGT
59.128
50.000
0.00
0.00
0.00
3.72
168
169
0.871057
TGTGTGTGTGTGTGTGTGTG
59.129
50.000
0.00
0.00
0.00
3.82
169
170
0.871722
GTGTGTGTGTGTGTGTGTGT
59.128
50.000
0.00
0.00
0.00
3.72
170
171
0.871057
TGTGTGTGTGTGTGTGTGTG
59.129
50.000
0.00
0.00
0.00
3.82
171
172
0.871722
GTGTGTGTGTGTGTGTGTGT
59.128
50.000
0.00
0.00
0.00
3.72
172
173
0.871057
TGTGTGTGTGTGTGTGTGTG
59.129
50.000
0.00
0.00
0.00
3.82
173
174
0.454285
GTGTGTGTGTGTGTGTGTGC
60.454
55.000
0.00
0.00
0.00
4.57
174
175
1.136565
GTGTGTGTGTGTGTGTGCC
59.863
57.895
0.00
0.00
0.00
5.01
175
176
1.002746
TGTGTGTGTGTGTGTGCCT
60.003
52.632
0.00
0.00
0.00
4.75
176
177
1.024046
TGTGTGTGTGTGTGTGCCTC
61.024
55.000
0.00
0.00
0.00
4.70
177
178
1.451207
TGTGTGTGTGTGTGCCTCC
60.451
57.895
0.00
0.00
0.00
4.30
178
179
2.203001
TGTGTGTGTGTGCCTCCG
60.203
61.111
0.00
0.00
0.00
4.63
179
180
2.108157
GTGTGTGTGTGCCTCCGA
59.892
61.111
0.00
0.00
0.00
4.55
180
181
1.956170
GTGTGTGTGTGCCTCCGAG
60.956
63.158
0.00
0.00
0.00
4.63
181
182
2.357517
GTGTGTGTGCCTCCGAGG
60.358
66.667
10.41
10.41
38.80
4.63
182
183
3.625897
TGTGTGTGCCTCCGAGGG
61.626
66.667
16.51
0.00
35.37
4.30
196
197
4.664267
AGGGCTCCCTCAGTGGCA
62.664
66.667
0.54
0.00
44.43
4.92
197
198
4.106925
GGGCTCCCTCAGTGGCAG
62.107
72.222
0.00
0.00
36.31
4.85
198
199
3.005539
GGCTCCCTCAGTGGCAGA
61.006
66.667
0.00
0.00
34.81
4.26
199
200
2.583520
GCTCCCTCAGTGGCAGAG
59.416
66.667
0.00
0.00
0.00
3.35
200
201
2.583520
CTCCCTCAGTGGCAGAGC
59.416
66.667
0.00
0.00
0.00
4.09
201
202
2.203832
TCCCTCAGTGGCAGAGCA
60.204
61.111
0.00
0.00
0.00
4.26
202
203
2.241479
CTCCCTCAGTGGCAGAGCAG
62.241
65.000
0.00
0.00
0.00
4.24
203
204
2.288778
CCCTCAGTGGCAGAGCAGA
61.289
63.158
0.00
0.00
0.00
4.26
204
205
1.218585
CCTCAGTGGCAGAGCAGAG
59.781
63.158
0.00
0.00
0.00
3.35
205
206
1.448189
CTCAGTGGCAGAGCAGAGC
60.448
63.158
0.00
0.00
0.00
4.09
206
207
2.168666
CTCAGTGGCAGAGCAGAGCA
62.169
60.000
0.00
0.00
0.00
4.26
207
208
1.302271
CAGTGGCAGAGCAGAGCAA
60.302
57.895
0.00
0.00
0.00
3.91
208
209
0.887836
CAGTGGCAGAGCAGAGCAAA
60.888
55.000
0.00
0.00
0.00
3.68
209
210
0.179009
AGTGGCAGAGCAGAGCAAAA
60.179
50.000
0.00
0.00
0.00
2.44
210
211
0.240411
GTGGCAGAGCAGAGCAAAAG
59.760
55.000
0.00
0.00
0.00
2.27
211
212
0.109153
TGGCAGAGCAGAGCAAAAGA
59.891
50.000
0.00
0.00
0.00
2.52
212
213
0.803740
GGCAGAGCAGAGCAAAAGAG
59.196
55.000
0.00
0.00
0.00
2.85
213
214
0.168568
GCAGAGCAGAGCAAAAGAGC
59.831
55.000
0.00
0.00
0.00
4.09
214
215
1.520494
CAGAGCAGAGCAAAAGAGCA
58.480
50.000
0.00
0.00
36.85
4.26
215
216
1.465387
CAGAGCAGAGCAAAAGAGCAG
59.535
52.381
0.00
0.00
36.85
4.24
216
217
1.072015
AGAGCAGAGCAAAAGAGCAGT
59.928
47.619
0.00
0.00
36.85
4.40
217
218
1.197264
GAGCAGAGCAAAAGAGCAGTG
59.803
52.381
0.00
0.00
36.85
3.66
218
219
0.386985
GCAGAGCAAAAGAGCAGTGC
60.387
55.000
7.13
7.13
37.99
4.40
222
223
2.260844
AGCAAAAGAGCAGTGCTACA
57.739
45.000
19.77
0.00
46.52
2.74
223
224
1.876156
AGCAAAAGAGCAGTGCTACAC
59.124
47.619
19.77
5.83
46.52
2.90
224
225
1.603802
GCAAAAGAGCAGTGCTACACA
59.396
47.619
19.77
0.00
39.88
3.72
225
226
4.845382
AGCAAAAGAGCAGTGCTACACAC
61.845
47.826
19.77
4.98
46.52
3.82
236
237
3.096461
GTGCTACACACGATACTGTACG
58.904
50.000
0.00
7.80
40.07
3.67
237
238
2.107178
GCTACACACGATACTGTACGC
58.893
52.381
0.00
0.00
0.00
4.42
238
239
2.476686
GCTACACACGATACTGTACGCA
60.477
50.000
0.00
0.00
0.00
5.24
239
240
1.973138
ACACACGATACTGTACGCAC
58.027
50.000
0.00
0.00
0.00
5.34
240
241
0.905175
CACACGATACTGTACGCACG
59.095
55.000
0.00
0.00
0.00
5.34
241
242
0.798159
ACACGATACTGTACGCACGA
59.202
50.000
0.00
0.00
0.00
4.35
242
243
1.399440
ACACGATACTGTACGCACGAT
59.601
47.619
0.00
0.00
0.00
3.73
243
244
2.159476
ACACGATACTGTACGCACGATT
60.159
45.455
0.00
0.00
0.00
3.34
244
245
2.462927
CACGATACTGTACGCACGATTC
59.537
50.000
0.00
0.00
0.00
2.52
245
246
2.096335
ACGATACTGTACGCACGATTCA
59.904
45.455
0.00
0.00
0.00
2.57
246
247
3.242969
ACGATACTGTACGCACGATTCAT
60.243
43.478
0.00
0.00
0.00
2.57
247
248
3.117994
CGATACTGTACGCACGATTCATG
59.882
47.826
0.00
0.00
0.00
3.07
248
249
0.999406
ACTGTACGCACGATTCATGC
59.001
50.000
0.00
0.00
39.81
4.06
249
250
0.998669
CTGTACGCACGATTCATGCA
59.001
50.000
5.49
0.00
43.57
3.96
250
251
0.718904
TGTACGCACGATTCATGCAC
59.281
50.000
5.49
0.00
43.57
4.57
251
252
0.314259
GTACGCACGATTCATGCACG
60.314
55.000
5.49
0.00
43.57
5.34
252
253
0.456995
TACGCACGATTCATGCACGA
60.457
50.000
5.49
0.00
43.57
4.35
253
254
1.296145
CGCACGATTCATGCACGAC
60.296
57.895
5.49
4.37
43.57
4.34
254
255
1.787215
GCACGATTCATGCACGACA
59.213
52.632
0.00
0.00
42.88
4.35
255
256
0.165727
GCACGATTCATGCACGACAA
59.834
50.000
0.00
0.00
42.88
3.18
256
257
1.869503
CACGATTCATGCACGACAAC
58.130
50.000
11.51
0.00
0.00
3.32
257
258
1.194322
CACGATTCATGCACGACAACA
59.806
47.619
11.51
0.00
0.00
3.33
258
259
1.460743
ACGATTCATGCACGACAACAG
59.539
47.619
11.51
0.00
0.00
3.16
259
260
1.726248
CGATTCATGCACGACAACAGA
59.274
47.619
0.00
0.00
0.00
3.41
260
261
2.349580
CGATTCATGCACGACAACAGAT
59.650
45.455
0.00
0.00
0.00
2.90
261
262
3.551485
CGATTCATGCACGACAACAGATA
59.449
43.478
0.00
0.00
0.00
1.98
262
263
4.548916
CGATTCATGCACGACAACAGATAC
60.549
45.833
0.00
0.00
0.00
2.24
263
264
2.616960
TCATGCACGACAACAGATACC
58.383
47.619
0.00
0.00
0.00
2.73
264
265
2.233676
TCATGCACGACAACAGATACCT
59.766
45.455
0.00
0.00
0.00
3.08
265
266
2.078849
TGCACGACAACAGATACCTG
57.921
50.000
0.00
0.00
45.76
4.00
275
276
2.515926
CAGATACCTGTCCGTCCATG
57.484
55.000
0.00
0.00
35.70
3.66
276
277
0.753262
AGATACCTGTCCGTCCATGC
59.247
55.000
0.00
0.00
0.00
4.06
277
278
0.464036
GATACCTGTCCGTCCATGCA
59.536
55.000
0.00
0.00
0.00
3.96
278
279
1.070758
GATACCTGTCCGTCCATGCAT
59.929
52.381
0.00
0.00
0.00
3.96
279
280
0.177836
TACCTGTCCGTCCATGCATG
59.822
55.000
20.19
20.19
0.00
4.06
280
281
1.078214
CCTGTCCGTCCATGCATGT
60.078
57.895
24.58
0.00
0.00
3.21
281
282
0.177836
CCTGTCCGTCCATGCATGTA
59.822
55.000
24.58
6.94
0.00
2.29
282
283
1.575244
CTGTCCGTCCATGCATGTAG
58.425
55.000
24.58
14.67
0.00
2.74
283
284
0.461870
TGTCCGTCCATGCATGTAGC
60.462
55.000
24.58
12.98
45.96
3.58
293
294
2.687842
GCATGTAGCAGAGTCCAGC
58.312
57.895
0.00
0.00
44.79
4.85
294
295
0.107993
GCATGTAGCAGAGTCCAGCA
60.108
55.000
7.79
0.00
44.79
4.41
295
296
1.937278
CATGTAGCAGAGTCCAGCAG
58.063
55.000
7.79
0.00
0.00
4.24
296
297
1.479730
CATGTAGCAGAGTCCAGCAGA
59.520
52.381
7.79
0.00
0.00
4.26
297
298
0.891373
TGTAGCAGAGTCCAGCAGAC
59.109
55.000
7.79
0.00
46.71
3.51
307
308
2.019984
GTCCAGCAGACCATTTGATCC
58.980
52.381
0.00
0.00
39.84
3.36
308
309
1.064463
TCCAGCAGACCATTTGATCCC
60.064
52.381
0.00
0.00
0.00
3.85
309
310
1.019673
CAGCAGACCATTTGATCCCG
58.980
55.000
0.00
0.00
0.00
5.14
310
311
0.749454
AGCAGACCATTTGATCCCGC
60.749
55.000
0.00
0.00
0.00
6.13
311
312
1.031571
GCAGACCATTTGATCCCGCA
61.032
55.000
0.00
0.00
0.00
5.69
312
313
1.683943
CAGACCATTTGATCCCGCAT
58.316
50.000
0.00
0.00
0.00
4.73
313
314
1.605710
CAGACCATTTGATCCCGCATC
59.394
52.381
0.00
0.00
0.00
3.91
314
315
0.588252
GACCATTTGATCCCGCATCG
59.412
55.000
0.00
0.00
33.61
3.84
315
316
0.107214
ACCATTTGATCCCGCATCGT
60.107
50.000
0.00
0.00
33.61
3.73
316
317
1.024271
CCATTTGATCCCGCATCGTT
58.976
50.000
0.00
0.00
33.61
3.85
317
318
1.002468
CCATTTGATCCCGCATCGTTC
60.002
52.381
0.00
0.00
33.61
3.95
318
319
1.670295
CATTTGATCCCGCATCGTTCA
59.330
47.619
0.00
0.00
33.61
3.18
319
320
2.036958
TTTGATCCCGCATCGTTCAT
57.963
45.000
0.00
0.00
33.61
2.57
320
321
1.581934
TTGATCCCGCATCGTTCATC
58.418
50.000
0.00
0.00
33.61
2.92
321
322
0.752658
TGATCCCGCATCGTTCATCT
59.247
50.000
0.00
0.00
33.61
2.90
322
323
1.143305
GATCCCGCATCGTTCATCTG
58.857
55.000
0.00
0.00
0.00
2.90
323
324
0.465705
ATCCCGCATCGTTCATCTGT
59.534
50.000
0.00
0.00
0.00
3.41
324
325
0.179111
TCCCGCATCGTTCATCTGTC
60.179
55.000
0.00
0.00
0.00
3.51
325
326
1.482621
CCCGCATCGTTCATCTGTCG
61.483
60.000
0.00
0.00
0.00
4.35
326
327
0.802222
CCGCATCGTTCATCTGTCGT
60.802
55.000
0.00
0.00
0.00
4.34
327
328
0.295763
CGCATCGTTCATCTGTCGTG
59.704
55.000
0.00
0.00
0.00
4.35
328
329
0.025513
GCATCGTTCATCTGTCGTGC
59.974
55.000
0.00
0.00
0.00
5.34
329
330
1.349234
CATCGTTCATCTGTCGTGCA
58.651
50.000
0.00
0.00
0.00
4.57
330
331
1.929169
CATCGTTCATCTGTCGTGCAT
59.071
47.619
0.00
0.00
0.00
3.96
331
332
2.931512
TCGTTCATCTGTCGTGCATA
57.068
45.000
0.00
0.00
0.00
3.14
332
333
2.526077
TCGTTCATCTGTCGTGCATAC
58.474
47.619
0.00
0.00
0.00
2.39
333
334
2.163613
TCGTTCATCTGTCGTGCATACT
59.836
45.455
0.00
0.00
0.00
2.12
334
335
2.279921
CGTTCATCTGTCGTGCATACTG
59.720
50.000
0.00
0.00
0.00
2.74
335
336
3.254060
GTTCATCTGTCGTGCATACTGT
58.746
45.455
0.00
0.00
0.00
3.55
336
337
3.592898
TCATCTGTCGTGCATACTGTT
57.407
42.857
0.00
0.00
0.00
3.16
337
338
3.253230
TCATCTGTCGTGCATACTGTTG
58.747
45.455
0.00
2.06
0.00
3.33
338
339
2.812358
TCTGTCGTGCATACTGTTGT
57.188
45.000
0.00
0.00
0.00
3.32
339
340
2.672714
TCTGTCGTGCATACTGTTGTC
58.327
47.619
0.00
0.00
0.00
3.18
340
341
1.386748
CTGTCGTGCATACTGTTGTCG
59.613
52.381
0.00
0.00
0.00
4.35
341
342
1.269361
TGTCGTGCATACTGTTGTCGT
60.269
47.619
0.00
0.00
0.00
4.34
342
343
1.385743
GTCGTGCATACTGTTGTCGTC
59.614
52.381
0.00
0.00
0.00
4.20
343
344
0.713883
CGTGCATACTGTTGTCGTCC
59.286
55.000
0.00
0.00
0.00
4.79
344
345
0.713883
GTGCATACTGTTGTCGTCCG
59.286
55.000
0.00
0.00
0.00
4.79
345
346
1.011968
TGCATACTGTTGTCGTCCGC
61.012
55.000
0.00
0.00
0.00
5.54
346
347
1.988409
CATACTGTTGTCGTCCGCG
59.012
57.895
0.00
0.00
39.92
6.46
347
348
1.804326
ATACTGTTGTCGTCCGCGC
60.804
57.895
0.00
0.00
38.14
6.86
348
349
2.480853
ATACTGTTGTCGTCCGCGCA
62.481
55.000
8.75
0.00
38.14
6.09
349
350
3.767230
CTGTTGTCGTCCGCGCAG
61.767
66.667
8.75
0.00
38.14
5.18
401
402
1.262882
GCGGTACCTCGTTTAACTCG
58.737
55.000
10.90
0.00
0.00
4.18
562
603
4.513692
TGTCCGTTTTGTAACATGGAGAAG
59.486
41.667
0.00
0.00
33.75
2.85
586
630
3.335579
AGGTTTCCAAATAGTCGACTGC
58.664
45.455
28.12
6.40
0.00
4.40
590
634
2.176045
TCCAAATAGTCGACTGCAGGA
58.824
47.619
28.12
23.32
0.00
3.86
615
659
6.166279
TGGTCTTTTAGAGTGACACATGATC
58.834
40.000
8.59
0.00
32.84
2.92
778
922
2.343758
GAGCAACGAGGAGCACCA
59.656
61.111
2.07
0.00
38.94
4.17
779
923
1.739562
GAGCAACGAGGAGCACCAG
60.740
63.158
2.07
0.00
38.94
4.00
806
950
2.256461
GCCGCTTGCCTTGTGAAG
59.744
61.111
0.00
0.00
0.00
3.02
919
1094
0.666913
CGGGATCGTGTATCTTCGGT
59.333
55.000
0.00
0.00
34.75
4.69
942
1117
1.411041
GTATTCGAGTACTGCCCCCT
58.589
55.000
10.57
0.00
0.00
4.79
983
1159
0.683973
TCGGCCCCAAACTACGTTTA
59.316
50.000
0.00
0.00
33.70
2.01
1020
1196
2.429930
CCTCGGCACCCAAAGTCA
59.570
61.111
0.00
0.00
0.00
3.41
1377
1553
1.827969
GTCATGAGGTCCTACTGCACT
59.172
52.381
0.00
0.00
0.00
4.40
1390
1566
2.543578
TGCACTCGCATGGAGAAAC
58.456
52.632
15.51
6.92
45.36
2.78
1404
1580
0.886490
AGAAACTGTTCCAGCGCCTG
60.886
55.000
2.29
1.18
34.37
4.85
1452
1628
3.007940
TGAACGAGAGGGACATCATTTGT
59.992
43.478
0.00
0.00
42.79
2.83
1503
1679
0.687757
AGAAGGTGGAGGAGCGCATA
60.688
55.000
11.47
0.00
0.00
3.14
1505
1681
1.690219
AAGGTGGAGGAGCGCATAGG
61.690
60.000
11.47
0.00
0.00
2.57
1665
1841
3.259314
ATGCAGTGGTGGAGGCCA
61.259
61.111
5.01
0.00
35.93
5.36
1674
1850
3.695606
TGGAGGCCAGACAGCGAC
61.696
66.667
5.01
0.00
0.00
5.19
1689
1865
0.390472
GCGACCTAAAGCTCAGCTGT
60.390
55.000
14.67
0.00
39.62
4.40
1700
1876
4.500499
AGCTCAGCTGTAGGAAATTCAT
57.500
40.909
14.67
0.00
37.57
2.57
1806
2045
3.717400
AGAGCATGTACGTGGAGTATG
57.283
47.619
16.68
0.17
37.69
2.39
1836
2086
1.051812
AGACCATCCTTGATAGGGCG
58.948
55.000
0.00
0.00
42.26
6.13
1842
2092
3.181461
CCATCCTTGATAGGGCGGATATC
60.181
52.174
0.00
0.00
42.26
1.63
1847
2097
4.339814
CCTTGATAGGGCGGATATCTAGTC
59.660
50.000
2.05
0.00
37.94
2.59
1855
2105
2.891580
GCGGATATCTAGTCCAGGACAA
59.108
50.000
22.31
7.07
35.41
3.18
1950
2200
2.095263
GTGTGGTGTGTATTGATGTGGC
60.095
50.000
0.00
0.00
0.00
5.01
2026
2280
5.455612
CGGGGGTGATTACATATTTGTAGGT
60.456
44.000
0.00
0.00
39.43
3.08
2165
3875
8.100135
AGAAATTGAGAACATAATCTCCTCCT
57.900
34.615
2.16
0.00
44.27
3.69
2207
3917
2.057137
ACCAGAAAAGCTTGCAGTGA
57.943
45.000
0.00
0.00
0.00
3.41
2213
3923
0.890542
AAAGCTTGCAGTGATCCGCA
60.891
50.000
0.00
0.00
36.05
5.69
2217
3927
2.543578
TTGCAGTGATCCGCAAGAC
58.456
52.632
9.50
0.00
42.93
3.01
2219
3929
2.456119
GCAGTGATCCGCAAGACCG
61.456
63.158
0.00
0.00
43.02
4.79
2242
3952
1.026718
AGGTTGCCGAGCACAATAGC
61.027
55.000
0.00
0.00
38.71
2.97
2272
3984
7.201812
GCTATAAACATCATCAACCATGTTGGA
60.202
37.037
7.08
0.00
41.42
3.53
2327
4039
0.464735
TTACGCACCACCAGCACTTT
60.465
50.000
0.00
0.00
0.00
2.66
2349
4061
2.349532
GCGGTTGCAGTTGTAAAGAGAC
60.350
50.000
0.00
0.00
42.15
3.36
2417
4129
4.787280
CTCCTCCTCCCCGCCAGT
62.787
72.222
0.00
0.00
0.00
4.00
2541
4259
3.504806
TCCCCCGGCCTCGAGATA
61.505
66.667
15.71
0.00
39.00
1.98
2573
4466
3.316573
GAGGCCGGACCACCTTCTG
62.317
68.421
1.76
0.00
43.14
3.02
2708
4601
2.430694
CCGATCCTCACATGGTTAGTGA
59.569
50.000
0.00
0.00
43.23
3.41
2713
4606
3.901222
TCCTCACATGGTTAGTGACTTGA
59.099
43.478
0.00
0.00
40.80
3.02
2714
4607
4.532126
TCCTCACATGGTTAGTGACTTGAT
59.468
41.667
0.00
0.00
40.80
2.57
2715
4608
4.633126
CCTCACATGGTTAGTGACTTGATG
59.367
45.833
0.00
0.00
40.80
3.07
2716
4609
4.578871
TCACATGGTTAGTGACTTGATGG
58.421
43.478
0.00
0.00
40.80
3.51
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
0
1
2.110578
GCAGGGATTAATGGCAAGGTT
58.889
47.619
0.00
0.00
0.00
3.50
1
2
1.689258
GGCAGGGATTAATGGCAAGGT
60.689
52.381
0.00
0.00
41.35
3.50
3
4
1.043022
GGGCAGGGATTAATGGCAAG
58.957
55.000
0.00
0.00
43.35
4.01
4
5
0.636101
AGGGCAGGGATTAATGGCAA
59.364
50.000
0.00
0.00
43.35
4.52
5
6
1.528600
TAGGGCAGGGATTAATGGCA
58.471
50.000
0.00
0.00
43.35
4.92
6
7
2.675658
TTAGGGCAGGGATTAATGGC
57.324
50.000
0.00
0.00
41.01
4.40
7
8
3.434309
CCATTAGGGCAGGGATTAATGG
58.566
50.000
7.49
7.49
43.37
3.16
8
9
4.387026
TCCATTAGGGCAGGGATTAATG
57.613
45.455
0.00
0.00
36.21
1.90
9
10
6.355094
CCATATCCATTAGGGCAGGGATTAAT
60.355
42.308
0.00
0.00
40.49
1.40
10
11
5.044179
CCATATCCATTAGGGCAGGGATTAA
60.044
44.000
0.00
0.00
40.49
1.40
11
12
4.478317
CCATATCCATTAGGGCAGGGATTA
59.522
45.833
0.00
0.00
40.49
1.75
12
13
3.270433
CCATATCCATTAGGGCAGGGATT
59.730
47.826
0.00
0.00
40.49
3.01
13
14
2.854967
CCATATCCATTAGGGCAGGGAT
59.145
50.000
0.00
0.00
42.55
3.85
14
15
2.157864
TCCATATCCATTAGGGCAGGGA
60.158
50.000
0.00
0.00
36.21
4.20
15
16
2.025887
GTCCATATCCATTAGGGCAGGG
60.026
54.545
0.00
0.00
36.21
4.45
16
17
2.355108
CGTCCATATCCATTAGGGCAGG
60.355
54.545
0.00
0.00
36.21
4.85
17
18
2.303022
ACGTCCATATCCATTAGGGCAG
59.697
50.000
0.00
0.00
36.21
4.85
18
19
2.038426
CACGTCCATATCCATTAGGGCA
59.962
50.000
0.00
0.00
36.21
5.36
19
20
2.615493
CCACGTCCATATCCATTAGGGC
60.615
54.545
0.00
0.00
36.21
5.19
20
21
2.903784
TCCACGTCCATATCCATTAGGG
59.096
50.000
0.00
0.00
34.83
3.53
21
22
3.617531
GCTCCACGTCCATATCCATTAGG
60.618
52.174
0.00
0.00
0.00
2.69
22
23
3.589988
GCTCCACGTCCATATCCATTAG
58.410
50.000
0.00
0.00
0.00
1.73
23
24
2.029380
CGCTCCACGTCCATATCCATTA
60.029
50.000
0.00
0.00
36.87
1.90
24
25
1.270305
CGCTCCACGTCCATATCCATT
60.270
52.381
0.00
0.00
36.87
3.16
25
26
0.318441
CGCTCCACGTCCATATCCAT
59.682
55.000
0.00
0.00
36.87
3.41
26
27
1.739667
CGCTCCACGTCCATATCCA
59.260
57.895
0.00
0.00
36.87
3.41
27
28
1.664965
GCGCTCCACGTCCATATCC
60.665
63.158
0.00
0.00
46.11
2.59
28
29
0.941463
CTGCGCTCCACGTCCATATC
60.941
60.000
9.73
0.00
46.11
1.63
29
30
1.068083
CTGCGCTCCACGTCCATAT
59.932
57.895
9.73
0.00
46.11
1.78
30
31
2.494445
CTGCGCTCCACGTCCATA
59.506
61.111
9.73
0.00
46.11
2.74
38
39
2.796483
AATAACGTGGCTGCGCTCCA
62.796
55.000
16.15
16.15
34.88
3.86
39
40
2.106683
AATAACGTGGCTGCGCTCC
61.107
57.895
9.73
10.83
34.88
4.70
40
41
1.060937
CAATAACGTGGCTGCGCTC
59.939
57.895
9.73
0.00
34.88
5.03
41
42
2.398554
CCAATAACGTGGCTGCGCT
61.399
57.895
9.73
0.00
34.88
5.92
42
43
1.363145
TACCAATAACGTGGCTGCGC
61.363
55.000
0.00
0.00
43.00
6.09
43
44
1.295792
ATACCAATAACGTGGCTGCG
58.704
50.000
0.00
0.93
43.00
5.18
44
45
2.943033
AGAATACCAATAACGTGGCTGC
59.057
45.455
0.00
0.00
43.00
5.25
45
46
3.560068
GGAGAATACCAATAACGTGGCTG
59.440
47.826
0.00
0.00
43.00
4.85
46
47
3.454812
AGGAGAATACCAATAACGTGGCT
59.545
43.478
0.00
0.00
43.00
4.75
47
48
3.805207
AGGAGAATACCAATAACGTGGC
58.195
45.455
0.00
0.00
43.00
5.01
48
49
6.753107
AAAAGGAGAATACCAATAACGTGG
57.247
37.500
0.00
0.00
44.92
4.94
72
73
6.944290
ACATGAATCATGACTCCTGAGAAAAA
59.056
34.615
27.86
0.00
43.81
1.94
73
74
6.373495
CACATGAATCATGACTCCTGAGAAAA
59.627
38.462
27.86
0.00
43.81
2.29
74
75
5.878669
CACATGAATCATGACTCCTGAGAAA
59.121
40.000
27.86
0.00
43.81
2.52
75
76
5.046087
ACACATGAATCATGACTCCTGAGAA
60.046
40.000
27.86
0.00
43.81
2.87
76
77
4.468868
ACACATGAATCATGACTCCTGAGA
59.531
41.667
27.86
0.00
43.81
3.27
77
78
4.571176
CACACATGAATCATGACTCCTGAG
59.429
45.833
27.86
10.14
43.81
3.35
78
79
4.019950
ACACACATGAATCATGACTCCTGA
60.020
41.667
27.86
0.00
43.81
3.86
79
80
4.094442
CACACACATGAATCATGACTCCTG
59.906
45.833
27.86
17.43
43.81
3.86
80
81
4.259356
CACACACATGAATCATGACTCCT
58.741
43.478
27.86
3.89
43.81
3.69
81
82
4.005650
ACACACACATGAATCATGACTCC
58.994
43.478
27.86
0.00
43.81
3.85
82
83
4.453478
ACACACACACATGAATCATGACTC
59.547
41.667
27.86
0.00
43.81
3.36
83
84
4.214758
CACACACACACATGAATCATGACT
59.785
41.667
27.86
10.37
43.81
3.41
84
85
4.023792
ACACACACACACATGAATCATGAC
60.024
41.667
27.86
0.00
43.81
3.06
85
86
4.023878
CACACACACACACATGAATCATGA
60.024
41.667
27.86
0.00
43.81
3.07
86
87
4.223659
CACACACACACACATGAATCATG
58.776
43.478
20.58
20.58
46.18
3.07
87
88
3.884693
ACACACACACACACATGAATCAT
59.115
39.130
0.00
0.00
0.00
2.45
88
89
3.065095
CACACACACACACACATGAATCA
59.935
43.478
0.00
0.00
0.00
2.57
89
90
3.065233
ACACACACACACACACATGAATC
59.935
43.478
0.00
0.00
0.00
2.52
90
91
3.016031
ACACACACACACACACATGAAT
58.984
40.909
0.00
0.00
0.00
2.57
91
92
2.431454
ACACACACACACACACATGAA
58.569
42.857
0.00
0.00
0.00
2.57
92
93
2.106477
ACACACACACACACACATGA
57.894
45.000
0.00
0.00
0.00
3.07
93
94
5.861222
ATATACACACACACACACACATG
57.139
39.130
0.00
0.00
0.00
3.21
116
117
9.260002
CACACACACACACACACATATATATAT
57.740
33.333
0.00
0.00
0.00
0.86
117
118
8.254508
ACACACACACACACACACATATATATA
58.745
33.333
0.00
0.00
0.00
0.86
118
119
7.064490
CACACACACACACACACACATATATAT
59.936
37.037
0.00
0.00
0.00
0.86
119
120
6.367422
CACACACACACACACACACATATATA
59.633
38.462
0.00
0.00
0.00
0.86
120
121
5.179182
CACACACACACACACACACATATAT
59.821
40.000
0.00
0.00
0.00
0.86
121
122
4.509600
CACACACACACACACACACATATA
59.490
41.667
0.00
0.00
0.00
0.86
122
123
3.312146
CACACACACACACACACACATAT
59.688
43.478
0.00
0.00
0.00
1.78
123
124
2.675348
CACACACACACACACACACATA
59.325
45.455
0.00
0.00
0.00
2.29
124
125
1.468127
CACACACACACACACACACAT
59.532
47.619
0.00
0.00
0.00
3.21
125
126
0.871057
CACACACACACACACACACA
59.129
50.000
0.00
0.00
0.00
3.72
126
127
0.871722
ACACACACACACACACACAC
59.128
50.000
0.00
0.00
0.00
3.82
127
128
0.871057
CACACACACACACACACACA
59.129
50.000
0.00
0.00
0.00
3.72
128
129
0.871722
ACACACACACACACACACAC
59.128
50.000
0.00
0.00
0.00
3.82
129
130
0.871057
CACACACACACACACACACA
59.129
50.000
0.00
0.00
0.00
3.72
130
131
0.871722
ACACACACACACACACACAC
59.128
50.000
0.00
0.00
0.00
3.82
131
132
0.871057
CACACACACACACACACACA
59.129
50.000
0.00
0.00
0.00
3.72
132
133
0.871722
ACACACACACACACACACAC
59.128
50.000
0.00
0.00
0.00
3.82
133
134
0.871057
CACACACACACACACACACA
59.129
50.000
0.00
0.00
0.00
3.72
134
135
0.871722
ACACACACACACACACACAC
59.128
50.000
0.00
0.00
0.00
3.82
135
136
0.871057
CACACACACACACACACACA
59.129
50.000
0.00
0.00
0.00
3.72
136
137
0.871722
ACACACACACACACACACAC
59.128
50.000
0.00
0.00
0.00
3.82
137
138
0.871057
CACACACACACACACACACA
59.129
50.000
0.00
0.00
0.00
3.72
138
139
0.871722
ACACACACACACACACACAC
59.128
50.000
0.00
0.00
0.00
3.82
139
140
0.871057
CACACACACACACACACACA
59.129
50.000
0.00
0.00
0.00
3.72
140
141
0.871722
ACACACACACACACACACAC
59.128
50.000
0.00
0.00
0.00
3.82
141
142
0.871057
CACACACACACACACACACA
59.129
50.000
0.00
0.00
0.00
3.72
142
143
0.871722
ACACACACACACACACACAC
59.128
50.000
0.00
0.00
0.00
3.82
143
144
0.871057
CACACACACACACACACACA
59.129
50.000
0.00
0.00
0.00
3.72
144
145
0.871722
ACACACACACACACACACAC
59.128
50.000
0.00
0.00
0.00
3.82
145
146
0.871057
CACACACACACACACACACA
59.129
50.000
0.00
0.00
0.00
3.72
146
147
0.871722
ACACACACACACACACACAC
59.128
50.000
0.00
0.00
0.00
3.82
147
148
0.871057
CACACACACACACACACACA
59.129
50.000
0.00
0.00
0.00
3.72
148
149
0.871722
ACACACACACACACACACAC
59.128
50.000
0.00
0.00
0.00
3.82
149
150
0.871057
CACACACACACACACACACA
59.129
50.000
0.00
0.00
0.00
3.72
150
151
0.871722
ACACACACACACACACACAC
59.128
50.000
0.00
0.00
0.00
3.82
151
152
0.871057
CACACACACACACACACACA
59.129
50.000
0.00
0.00
0.00
3.72
152
153
0.871722
ACACACACACACACACACAC
59.128
50.000
0.00
0.00
0.00
3.82
153
154
0.871057
CACACACACACACACACACA
59.129
50.000
0.00
0.00
0.00
3.72
154
155
0.454285
GCACACACACACACACACAC
60.454
55.000
0.00
0.00
0.00
3.82
155
156
1.581727
GGCACACACACACACACACA
61.582
55.000
0.00
0.00
0.00
3.72
156
157
1.136565
GGCACACACACACACACAC
59.863
57.895
0.00
0.00
0.00
3.82
157
158
1.002746
AGGCACACACACACACACA
60.003
52.632
0.00
0.00
0.00
3.72
158
159
1.714899
GGAGGCACACACACACACAC
61.715
60.000
0.00
0.00
0.00
3.82
159
160
1.451207
GGAGGCACACACACACACA
60.451
57.895
0.00
0.00
0.00
3.72
160
161
2.534019
CGGAGGCACACACACACAC
61.534
63.158
0.00
0.00
0.00
3.82
161
162
2.203001
CGGAGGCACACACACACA
60.203
61.111
0.00
0.00
0.00
3.72
162
163
1.956170
CTCGGAGGCACACACACAC
60.956
63.158
0.00
0.00
0.00
3.82
163
164
2.421314
CTCGGAGGCACACACACA
59.579
61.111
0.00
0.00
0.00
3.72
164
165
2.357517
CCTCGGAGGCACACACAC
60.358
66.667
11.83
0.00
0.00
3.82
165
166
3.625897
CCCTCGGAGGCACACACA
61.626
66.667
18.91
0.00
32.73
3.72
184
185
2.203832
TGCTCTGCCACTGAGGGA
60.204
61.111
4.04
0.00
38.09
4.20
185
186
2.241479
CTCTGCTCTGCCACTGAGGG
62.241
65.000
4.04
0.00
38.09
4.30
186
187
1.218585
CTCTGCTCTGCCACTGAGG
59.781
63.158
4.04
0.00
41.84
3.86
187
188
1.448189
GCTCTGCTCTGCCACTGAG
60.448
63.158
0.00
0.00
35.61
3.35
188
189
1.761500
TTGCTCTGCTCTGCCACTGA
61.761
55.000
0.00
0.00
0.00
3.41
189
190
0.887836
TTTGCTCTGCTCTGCCACTG
60.888
55.000
0.00
0.00
0.00
3.66
190
191
0.179009
TTTTGCTCTGCTCTGCCACT
60.179
50.000
0.00
0.00
0.00
4.00
191
192
0.240411
CTTTTGCTCTGCTCTGCCAC
59.760
55.000
0.00
0.00
0.00
5.01
192
193
0.109153
TCTTTTGCTCTGCTCTGCCA
59.891
50.000
0.00
0.00
0.00
4.92
193
194
0.803740
CTCTTTTGCTCTGCTCTGCC
59.196
55.000
0.00
0.00
0.00
4.85
194
195
0.168568
GCTCTTTTGCTCTGCTCTGC
59.831
55.000
0.00
0.00
0.00
4.26
195
196
1.465387
CTGCTCTTTTGCTCTGCTCTG
59.535
52.381
0.00
0.00
0.00
3.35
196
197
1.072015
ACTGCTCTTTTGCTCTGCTCT
59.928
47.619
0.00
0.00
0.00
4.09
197
198
1.197264
CACTGCTCTTTTGCTCTGCTC
59.803
52.381
0.00
0.00
0.00
4.26
198
199
1.236628
CACTGCTCTTTTGCTCTGCT
58.763
50.000
0.00
0.00
0.00
4.24
199
200
0.386985
GCACTGCTCTTTTGCTCTGC
60.387
55.000
0.00
0.00
33.26
4.26
200
201
1.236628
AGCACTGCTCTTTTGCTCTG
58.763
50.000
0.00
0.00
43.14
3.35
201
202
2.224378
TGTAGCACTGCTCTTTTGCTCT
60.224
45.455
6.86
0.00
43.14
4.09
202
203
2.096019
GTGTAGCACTGCTCTTTTGCTC
60.096
50.000
6.86
0.00
43.14
4.26
204
205
1.603802
TGTGTAGCACTGCTCTTTTGC
59.396
47.619
6.86
0.00
40.44
3.68
205
206
2.348872
CGTGTGTAGCACTGCTCTTTTG
60.349
50.000
6.86
0.00
45.57
2.44
206
207
1.867233
CGTGTGTAGCACTGCTCTTTT
59.133
47.619
6.86
0.00
45.57
2.27
207
208
1.068588
TCGTGTGTAGCACTGCTCTTT
59.931
47.619
6.86
0.00
45.57
2.52
208
209
0.673985
TCGTGTGTAGCACTGCTCTT
59.326
50.000
6.86
0.00
45.57
2.85
209
210
0.891373
ATCGTGTGTAGCACTGCTCT
59.109
50.000
6.86
0.00
45.57
4.09
210
211
2.159366
AGTATCGTGTGTAGCACTGCTC
60.159
50.000
6.86
0.26
45.57
4.26
211
212
1.819288
AGTATCGTGTGTAGCACTGCT
59.181
47.619
8.95
8.95
45.57
4.24
212
213
1.920574
CAGTATCGTGTGTAGCACTGC
59.079
52.381
0.00
0.00
45.57
4.40
213
214
3.217599
ACAGTATCGTGTGTAGCACTG
57.782
47.619
0.00
0.00
45.57
3.66
214
215
3.181513
CGTACAGTATCGTGTGTAGCACT
60.182
47.826
0.00
0.00
45.57
4.40
215
216
3.096461
CGTACAGTATCGTGTGTAGCAC
58.904
50.000
0.00
0.00
44.36
4.40
216
217
2.476686
GCGTACAGTATCGTGTGTAGCA
60.477
50.000
0.00
0.00
29.78
3.49
217
218
2.107178
GCGTACAGTATCGTGTGTAGC
58.893
52.381
0.00
0.00
29.78
3.58
218
219
3.096461
GTGCGTACAGTATCGTGTGTAG
58.904
50.000
0.00
0.00
29.78
2.74
219
220
2.474361
CGTGCGTACAGTATCGTGTGTA
60.474
50.000
4.09
0.00
31.46
2.90
220
221
1.726892
CGTGCGTACAGTATCGTGTGT
60.727
52.381
4.09
0.00
31.46
3.72
221
222
0.905175
CGTGCGTACAGTATCGTGTG
59.095
55.000
4.09
0.00
31.46
3.82
222
223
0.798159
TCGTGCGTACAGTATCGTGT
59.202
50.000
4.09
0.00
34.21
4.49
223
224
2.101053
ATCGTGCGTACAGTATCGTG
57.899
50.000
4.09
0.00
0.00
4.35
224
225
2.096335
TGAATCGTGCGTACAGTATCGT
59.904
45.455
4.09
0.00
0.00
3.73
225
226
2.711885
TGAATCGTGCGTACAGTATCG
58.288
47.619
4.09
0.00
0.00
2.92
226
227
3.121328
GCATGAATCGTGCGTACAGTATC
60.121
47.826
11.98
0.00
36.64
2.24
227
228
2.794910
GCATGAATCGTGCGTACAGTAT
59.205
45.455
11.98
0.00
36.64
2.12
228
229
2.190161
GCATGAATCGTGCGTACAGTA
58.810
47.619
11.98
0.00
36.64
2.74
229
230
0.999406
GCATGAATCGTGCGTACAGT
59.001
50.000
11.98
0.00
36.64
3.55
230
231
3.786955
GCATGAATCGTGCGTACAG
57.213
52.632
11.98
0.00
36.64
2.74
236
237
0.165727
TTGTCGTGCATGAATCGTGC
59.834
50.000
19.69
19.69
45.53
5.34
237
238
1.194322
TGTTGTCGTGCATGAATCGTG
59.806
47.619
10.93
0.00
0.00
4.35
238
239
1.460743
CTGTTGTCGTGCATGAATCGT
59.539
47.619
10.93
0.00
0.00
3.73
239
240
1.726248
TCTGTTGTCGTGCATGAATCG
59.274
47.619
10.93
0.00
0.00
3.34
240
241
4.260375
GGTATCTGTTGTCGTGCATGAATC
60.260
45.833
10.93
4.86
0.00
2.52
241
242
3.623060
GGTATCTGTTGTCGTGCATGAAT
59.377
43.478
10.93
1.86
0.00
2.57
242
243
3.000041
GGTATCTGTTGTCGTGCATGAA
59.000
45.455
10.93
0.00
0.00
2.57
243
244
2.233676
AGGTATCTGTTGTCGTGCATGA
59.766
45.455
3.97
3.97
0.00
3.07
244
245
2.349580
CAGGTATCTGTTGTCGTGCATG
59.650
50.000
0.00
0.00
36.30
4.06
245
246
2.621338
CAGGTATCTGTTGTCGTGCAT
58.379
47.619
0.00
0.00
36.30
3.96
246
247
2.078849
CAGGTATCTGTTGTCGTGCA
57.921
50.000
0.00
0.00
36.30
4.57
256
257
1.539065
GCATGGACGGACAGGTATCTG
60.539
57.143
0.04
0.04
46.10
2.90
257
258
0.753262
GCATGGACGGACAGGTATCT
59.247
55.000
0.00
0.00
0.00
1.98
258
259
0.464036
TGCATGGACGGACAGGTATC
59.536
55.000
0.00
0.00
0.00
2.24
259
260
1.131638
ATGCATGGACGGACAGGTAT
58.868
50.000
0.00
0.00
0.00
2.73
260
261
0.177836
CATGCATGGACGGACAGGTA
59.822
55.000
19.40
0.00
0.00
3.08
261
262
1.078214
CATGCATGGACGGACAGGT
60.078
57.895
19.40
0.00
0.00
4.00
262
263
0.177836
TACATGCATGGACGGACAGG
59.822
55.000
29.41
1.63
0.00
4.00
263
264
1.575244
CTACATGCATGGACGGACAG
58.425
55.000
29.41
5.40
0.00
3.51
264
265
0.461870
GCTACATGCATGGACGGACA
60.462
55.000
29.41
5.67
42.31
4.02
265
266
2.311294
GCTACATGCATGGACGGAC
58.689
57.895
29.41
9.72
42.31
4.79
266
267
4.855105
GCTACATGCATGGACGGA
57.145
55.556
29.41
9.11
42.31
4.69
275
276
0.107993
TGCTGGACTCTGCTACATGC
60.108
55.000
0.00
0.00
43.25
4.06
276
277
1.479730
TCTGCTGGACTCTGCTACATG
59.520
52.381
0.00
0.00
38.45
3.21
277
278
1.480137
GTCTGCTGGACTCTGCTACAT
59.520
52.381
3.73
0.00
41.46
2.29
278
279
0.891373
GTCTGCTGGACTCTGCTACA
59.109
55.000
3.73
0.00
41.46
2.74
279
280
0.174617
GGTCTGCTGGACTCTGCTAC
59.825
60.000
9.50
0.00
43.97
3.58
280
281
0.251787
TGGTCTGCTGGACTCTGCTA
60.252
55.000
9.50
0.00
43.97
3.49
281
282
0.908656
ATGGTCTGCTGGACTCTGCT
60.909
55.000
9.50
0.00
43.97
4.24
282
283
0.035630
AATGGTCTGCTGGACTCTGC
60.036
55.000
9.50
0.00
43.97
4.26
283
284
2.082231
CAAATGGTCTGCTGGACTCTG
58.918
52.381
9.50
1.20
43.97
3.35
284
285
1.980765
TCAAATGGTCTGCTGGACTCT
59.019
47.619
9.50
0.00
43.97
3.24
285
286
2.479566
TCAAATGGTCTGCTGGACTC
57.520
50.000
9.50
2.66
43.97
3.36
286
287
2.356535
GGATCAAATGGTCTGCTGGACT
60.357
50.000
9.50
0.00
43.97
3.85
287
288
2.019984
GGATCAAATGGTCTGCTGGAC
58.980
52.381
0.00
2.54
43.79
4.02
288
289
1.064463
GGGATCAAATGGTCTGCTGGA
60.064
52.381
0.00
0.00
0.00
3.86
289
290
1.396653
GGGATCAAATGGTCTGCTGG
58.603
55.000
0.00
0.00
0.00
4.85
290
291
1.019673
CGGGATCAAATGGTCTGCTG
58.980
55.000
0.00
0.00
0.00
4.41
291
292
0.749454
GCGGGATCAAATGGTCTGCT
60.749
55.000
0.00
0.00
0.00
4.24
292
293
1.031571
TGCGGGATCAAATGGTCTGC
61.032
55.000
0.00
5.03
0.00
4.26
293
294
1.605710
GATGCGGGATCAAATGGTCTG
59.394
52.381
4.47
0.00
0.00
3.51
294
295
1.811558
CGATGCGGGATCAAATGGTCT
60.812
52.381
10.19
0.00
0.00
3.85
295
296
0.588252
CGATGCGGGATCAAATGGTC
59.412
55.000
10.19
0.00
0.00
4.02
296
297
0.107214
ACGATGCGGGATCAAATGGT
60.107
50.000
10.19
0.00
0.00
3.55
297
298
1.002468
GAACGATGCGGGATCAAATGG
60.002
52.381
10.19
0.00
0.00
3.16
298
299
1.670295
TGAACGATGCGGGATCAAATG
59.330
47.619
10.19
0.00
0.00
2.32
299
300
2.036958
TGAACGATGCGGGATCAAAT
57.963
45.000
10.19
0.00
0.00
2.32
300
301
1.939934
GATGAACGATGCGGGATCAAA
59.060
47.619
10.19
0.00
0.00
2.69
301
302
1.138859
AGATGAACGATGCGGGATCAA
59.861
47.619
10.19
0.00
0.00
2.57
302
303
0.752658
AGATGAACGATGCGGGATCA
59.247
50.000
10.19
0.00
0.00
2.92
303
304
1.143305
CAGATGAACGATGCGGGATC
58.857
55.000
0.00
0.00
0.00
3.36
304
305
0.465705
ACAGATGAACGATGCGGGAT
59.534
50.000
0.00
0.00
0.00
3.85
305
306
0.179111
GACAGATGAACGATGCGGGA
60.179
55.000
0.00
0.00
0.00
5.14
306
307
1.482621
CGACAGATGAACGATGCGGG
61.483
60.000
0.00
0.00
0.00
6.13
307
308
0.802222
ACGACAGATGAACGATGCGG
60.802
55.000
0.00
0.00
0.00
5.69
308
309
0.295763
CACGACAGATGAACGATGCG
59.704
55.000
0.00
0.00
0.00
4.73
309
310
0.025513
GCACGACAGATGAACGATGC
59.974
55.000
0.00
0.00
0.00
3.91
310
311
1.349234
TGCACGACAGATGAACGATG
58.651
50.000
0.00
0.00
0.00
3.84
311
312
2.299993
ATGCACGACAGATGAACGAT
57.700
45.000
0.00
0.00
0.00
3.73
312
313
2.163613
AGTATGCACGACAGATGAACGA
59.836
45.455
0.00
0.00
0.00
3.85
313
314
2.279921
CAGTATGCACGACAGATGAACG
59.720
50.000
0.00
0.00
0.00
3.95
314
315
3.254060
ACAGTATGCACGACAGATGAAC
58.746
45.455
0.00
0.00
42.53
3.18
315
316
3.592898
ACAGTATGCACGACAGATGAA
57.407
42.857
0.00
0.00
42.53
2.57
316
317
3.253230
CAACAGTATGCACGACAGATGA
58.747
45.455
0.00
0.00
42.53
2.92
317
318
2.995939
ACAACAGTATGCACGACAGATG
59.004
45.455
0.00
0.00
42.53
2.90
318
319
3.254060
GACAACAGTATGCACGACAGAT
58.746
45.455
0.00
0.00
42.53
2.90
319
320
2.672714
GACAACAGTATGCACGACAGA
58.327
47.619
0.00
0.00
42.53
3.41
320
321
1.386748
CGACAACAGTATGCACGACAG
59.613
52.381
0.00
0.00
42.53
3.51
321
322
1.269361
ACGACAACAGTATGCACGACA
60.269
47.619
0.00
0.00
42.53
4.35
322
323
1.385743
GACGACAACAGTATGCACGAC
59.614
52.381
0.00
0.00
42.53
4.34
323
324
1.667756
GGACGACAACAGTATGCACGA
60.668
52.381
0.00
0.00
42.53
4.35
324
325
0.713883
GGACGACAACAGTATGCACG
59.286
55.000
0.00
0.00
42.53
5.34
325
326
0.713883
CGGACGACAACAGTATGCAC
59.286
55.000
0.00
0.00
42.53
4.57
326
327
1.011968
GCGGACGACAACAGTATGCA
61.012
55.000
0.00
0.00
42.53
3.96
327
328
1.708027
GCGGACGACAACAGTATGC
59.292
57.895
0.00
0.00
42.53
3.14
328
329
1.988409
CGCGGACGACAACAGTATG
59.012
57.895
0.00
0.00
43.93
2.39
329
330
1.804326
GCGCGGACGACAACAGTAT
60.804
57.895
8.83
0.00
43.93
2.12
330
331
2.429571
GCGCGGACGACAACAGTA
60.430
61.111
8.83
0.00
43.93
2.74
331
332
4.578898
TGCGCGGACGACAACAGT
62.579
61.111
8.83
0.00
43.93
3.55
332
333
3.767230
CTGCGCGGACGACAACAG
61.767
66.667
11.90
0.00
43.93
3.16
344
345
3.184683
CTCTCGGAACTGCTGCGC
61.185
66.667
0.00
0.00
39.03
6.09
345
346
3.184683
GCTCTCGGAACTGCTGCG
61.185
66.667
0.00
0.00
40.85
5.18
346
347
1.230635
TTTGCTCTCGGAACTGCTGC
61.231
55.000
0.00
0.00
0.00
5.25
347
348
1.229428
TTTTGCTCTCGGAACTGCTG
58.771
50.000
0.00
0.00
0.00
4.41
348
349
1.808945
CATTTTGCTCTCGGAACTGCT
59.191
47.619
0.00
0.00
0.00
4.24
349
350
1.730446
GCATTTTGCTCTCGGAACTGC
60.730
52.381
0.00
0.00
40.96
4.40
350
351
1.536766
TGCATTTTGCTCTCGGAACTG
59.463
47.619
0.75
0.00
45.31
3.16
351
352
1.808945
CTGCATTTTGCTCTCGGAACT
59.191
47.619
0.75
0.00
45.31
3.01
352
353
1.537202
ACTGCATTTTGCTCTCGGAAC
59.463
47.619
0.75
0.00
45.31
3.62
353
354
1.896220
ACTGCATTTTGCTCTCGGAA
58.104
45.000
0.75
0.00
45.31
4.30
354
355
2.028112
AGTACTGCATTTTGCTCTCGGA
60.028
45.455
0.00
0.00
45.31
4.55
355
356
2.350522
AGTACTGCATTTTGCTCTCGG
58.649
47.619
0.00
0.00
45.31
4.63
356
357
3.000674
CGTAGTACTGCATTTTGCTCTCG
60.001
47.826
11.70
0.00
45.31
4.04
357
358
3.242123
GCGTAGTACTGCATTTTGCTCTC
60.242
47.826
11.70
0.00
45.31
3.20
562
603
3.751698
AGTCGACTATTTGGAAACCTTGC
59.248
43.478
18.46
0.00
0.00
4.01
586
630
4.932200
GTGTCACTCTAAAAGACCATCCTG
59.068
45.833
0.00
0.00
0.00
3.86
590
634
6.114187
TCATGTGTCACTCTAAAAGACCAT
57.886
37.500
4.27
0.00
0.00
3.55
615
659
3.587797
TCGTTTGACCTAGCTACTTGG
57.412
47.619
0.00
0.00
32.84
3.61
740
884
3.068560
CCTGAAACGAAAATCCACCGTA
58.931
45.455
0.00
0.00
35.28
4.02
741
885
1.877443
CCTGAAACGAAAATCCACCGT
59.123
47.619
0.00
0.00
38.24
4.83
742
886
2.147958
TCCTGAAACGAAAATCCACCG
58.852
47.619
0.00
0.00
0.00
4.94
744
888
2.552315
TGCTCCTGAAACGAAAATCCAC
59.448
45.455
0.00
0.00
0.00
4.02
746
890
3.565516
GTTGCTCCTGAAACGAAAATCC
58.434
45.455
0.00
0.00
0.00
3.01
806
950
3.007398
CCTCCTCCATGATGTAAGTAGCC
59.993
52.174
0.00
0.00
0.00
3.93
907
1051
2.503920
ATACGGCACCGAAGATACAC
57.496
50.000
17.40
0.00
42.83
2.90
908
1052
2.542205
CGAATACGGCACCGAAGATACA
60.542
50.000
17.40
0.00
42.83
2.29
909
1053
2.049228
CGAATACGGCACCGAAGATAC
58.951
52.381
17.40
1.44
42.83
2.24
919
1094
0.101759
GGCAGTACTCGAATACGGCA
59.898
55.000
25.82
0.00
44.92
5.69
1020
1196
1.370064
GTTGTACAGGTCGTGGGCT
59.630
57.895
0.00
0.00
0.00
5.19
1068
1244
1.961277
CTGGGTCCGTCTGCAACAC
60.961
63.158
0.00
0.00
0.00
3.32
1071
1247
1.371183
CTTCTGGGTCCGTCTGCAA
59.629
57.895
0.00
0.00
0.00
4.08
1356
1532
1.827969
GTGCAGTAGGACCTCATGACT
59.172
52.381
0.00
0.00
0.00
3.41
1377
1553
1.071542
TGGAACAGTTTCTCCATGCGA
59.928
47.619
0.00
0.00
36.79
5.10
1410
1586
2.687200
TACAGCTCCGGCACCCAT
60.687
61.111
0.00
0.00
41.70
4.00
1452
1628
2.145397
AGTAGTCGATGAAGCCCTGA
57.855
50.000
0.00
0.00
0.00
3.86
1482
1658
2.948720
GCGCTCCTCCACCTTCTGT
61.949
63.158
0.00
0.00
0.00
3.41
1665
1841
1.203523
CTGAGCTTTAGGTCGCTGTCT
59.796
52.381
4.67
0.00
44.88
3.41
1689
1865
3.901844
CTCCGGGGTAGATGAATTTCCTA
59.098
47.826
0.00
0.00
0.00
2.94
1700
1876
0.188587
ATCTCATGCTCCGGGGTAGA
59.811
55.000
1.62
1.35
0.00
2.59
1806
2045
6.656632
TCAAGGATGGTCTAGTATGATCAC
57.343
41.667
0.00
0.00
29.00
3.06
1836
2086
3.259625
GCCTTGTCCTGGACTAGATATCC
59.740
52.174
31.19
14.71
37.54
2.59
1842
2092
0.107945
GCTGCCTTGTCCTGGACTAG
60.108
60.000
25.32
25.32
35.74
2.57
1847
2097
2.633509
GCTTGCTGCCTTGTCCTGG
61.634
63.158
0.00
0.00
35.15
4.45
1870
2120
2.108168
CGGTCCCTAAGATTGGTCTCA
58.892
52.381
0.00
0.00
32.15
3.27
1882
2132
2.752829
CGGTATAAACCCTCGGTCCCTA
60.753
54.545
0.00
0.00
43.54
3.53
1888
2138
1.536709
CGAACCGGTATAAACCCTCGG
60.537
57.143
8.00
0.00
43.54
4.63
1913
2163
2.058595
CACTGGACGTCCCCCTAGG
61.059
68.421
31.19
15.68
34.29
3.02
2140
3850
8.100135
AGGAGGAGATTATGTTCTCAATTTCT
57.900
34.615
0.00
0.00
43.28
2.52
2185
3895
3.951037
TCACTGCAAGCTTTTCTGGTTTA
59.049
39.130
0.00
0.00
37.60
2.01
2207
3917
1.079127
CCTGTTCGGTCTTGCGGAT
60.079
57.895
0.00
0.00
0.00
4.18
2217
3927
3.423154
GCTCGGCAACCTGTTCGG
61.423
66.667
0.00
0.00
39.35
4.30
2219
3929
1.444119
TTGTGCTCGGCAACCTGTTC
61.444
55.000
0.00
0.00
41.47
3.18
2242
3952
9.006839
ACATGGTTGATGATGTTTATAGCTATG
57.993
33.333
16.77
0.00
35.80
2.23
2279
3991
2.743664
CGAAGTGCTCAACAATGGATCA
59.256
45.455
0.00
0.00
0.00
2.92
2349
4061
4.723309
AGAAATGCCCTAAGAAGCTATGG
58.277
43.478
0.00
0.00
0.00
2.74
2638
4531
1.638133
CAGAGCATGAAGACGGACAG
58.362
55.000
0.00
0.00
0.00
3.51
2688
4581
3.131223
AGTCACTAACCATGTGAGGATCG
59.869
47.826
0.00
0.00
43.90
3.69
Based at the University of Bristol with support from BBSRC .
AutoCloner maintained by Alex Coulton.