Multiple sequence alignment - TraesCS6B01G404300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G404300 chr6B 100.000 2825 0 0 1 2825 679751771 679754595 0.000000e+00 5217.0
1 TraesCS6B01G404300 chr6B 90.811 185 9 6 2642 2825 219108007 219108184 1.010000e-59 241.0
2 TraesCS6B01G404300 chr6B 77.731 238 40 10 963 1198 704862130 704861904 1.770000e-27 134.0
3 TraesCS6B01G404300 chr6B 76.761 142 29 4 1057 1196 69720026 69719887 3.020000e-10 76.8
4 TraesCS6B01G404300 chr6A 91.162 1867 109 16 258 2097 594720600 594722437 0.000000e+00 2483.0
5 TraesCS6B01G404300 chr6A 86.940 268 15 8 2375 2640 594722615 594722864 1.660000e-72 283.0
6 TraesCS6B01G404300 chr6A 86.585 164 17 5 2097 2255 479630285 479630122 2.890000e-40 176.0
7 TraesCS6B01G404300 chr6A 86.585 164 17 5 2097 2255 606770522 606770685 2.890000e-40 176.0
8 TraesCS6B01G404300 chr6D 90.327 1406 103 22 494 1891 448646168 448647548 0.000000e+00 1812.0
9 TraesCS6B01G404300 chr6D 93.598 328 20 1 1564 1891 448653326 448653652 3.270000e-134 488.0
10 TraesCS6B01G404300 chr6D 90.079 252 17 5 257 502 448645772 448646021 1.260000e-83 320.0
11 TraesCS6B01G404300 chr6D 89.362 188 19 1 1911 2097 448654045 448654232 4.700000e-58 235.0
12 TraesCS6B01G404300 chr6D 90.566 53 3 2 1123 1174 33312383 33312332 5.050000e-08 69.4
13 TraesCS6B01G404300 chr2B 92.391 184 11 2 2642 2825 165068833 165069013 2.790000e-65 259.0
14 TraesCS6B01G404300 chr2B 90.860 186 13 4 2641 2825 30311240 30311058 2.170000e-61 246.0
15 TraesCS6B01G404300 chr2B 90.374 187 14 4 2640 2825 29705040 29704857 2.810000e-60 243.0
16 TraesCS6B01G404300 chr2B 89.247 186 14 6 2641 2825 166428982 166428802 7.870000e-56 228.0
17 TraesCS6B01G404300 chr2B 87.654 162 16 3 2100 2257 774659554 774659393 4.810000e-43 185.0
18 TraesCS6B01G404300 chr3B 91.935 186 12 2 2640 2825 252794228 252794046 1.000000e-64 257.0
19 TraesCS6B01G404300 chr3B 79.412 238 33 6 55 291 779107024 779107246 1.360000e-33 154.0
20 TraesCS6B01G404300 chr7B 90.909 187 12 4 2640 2825 733668473 733668291 2.170000e-61 246.0
21 TraesCS6B01G404300 chr7B 88.770 187 16 5 2640 2825 399256283 399256101 1.020000e-54 224.0
22 TraesCS6B01G404300 chr7B 79.832 238 36 7 55 291 594901803 594901577 2.250000e-36 163.0
23 TraesCS6B01G404300 chr7B 82.424 165 26 3 53 216 51044606 51044768 1.060000e-29 141.0
24 TraesCS6B01G404300 chr7B 79.167 216 34 10 55 269 594896776 594896571 3.790000e-29 139.0
25 TraesCS6B01G404300 chr1B 90.805 174 13 3 2653 2825 392462880 392463051 2.190000e-56 230.0
26 TraesCS6B01G404300 chr1B 86.585 164 17 5 2097 2255 280701247 280701084 2.890000e-40 176.0
27 TraesCS6B01G404300 chr7A 90.244 164 10 4 2097 2256 17399164 17399003 2.850000e-50 209.0
28 TraesCS6B01G404300 chr7D 88.095 168 11 7 2097 2256 554815062 554814896 1.030000e-44 191.0
29 TraesCS6B01G404300 chr7D 79.630 216 39 4 56 268 96506079 96506292 1.750000e-32 150.0
30 TraesCS6B01G404300 chr5A 87.730 163 15 5 2097 2254 555074087 555074249 4.810000e-43 185.0
31 TraesCS6B01G404300 chr5A 79.476 229 40 6 57 280 579917611 579917837 3.770000e-34 156.0
32 TraesCS6B01G404300 chrUn 86.826 167 13 9 2097 2255 39599403 39599238 8.040000e-41 178.0
33 TraesCS6B01G404300 chr5B 86.585 164 17 5 2097 2255 87291871 87291708 2.890000e-40 176.0
34 TraesCS6B01G404300 chr5B 82.514 183 26 6 52 233 108798944 108799121 3.770000e-34 156.0
35 TraesCS6B01G404300 chr5B 77.778 198 39 5 57 251 564529453 564529648 1.780000e-22 117.0
36 TraesCS6B01G404300 chr5B 82.963 135 18 3 62 196 585805038 585805167 1.780000e-22 117.0
37 TraesCS6B01G404300 chr4D 87.755 49 6 0 1121 1169 77124004 77124052 1.090000e-04 58.4
38 TraesCS6B01G404300 chr4B 86.538 52 7 0 1118 1169 109227108 109227159 1.090000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G404300 chr6B 679751771 679754595 2824 False 5217.0 5217 100.000 1 2825 1 chr6B.!!$F2 2824
1 TraesCS6B01G404300 chr6A 594720600 594722864 2264 False 1383.0 2483 89.051 258 2640 2 chr6A.!!$F2 2382
2 TraesCS6B01G404300 chr6D 448645772 448647548 1776 False 1066.0 1812 90.203 257 1891 2 chr6D.!!$F1 1634
3 TraesCS6B01G404300 chr6D 448653326 448654232 906 False 361.5 488 91.480 1564 2097 2 chr6D.!!$F2 533

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
107 108 0.171007 ATGGCATTTTTGGAGCGTCG 59.829 50.0 0.0 0.0 0.0 5.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2072 2642 0.036164 TCATTAGCCGCACACCAGTT 59.964 50.0 0.0 0.0 0.0 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.776376 ACTGGCTATTTTGGTTTATTGAATTG 57.224 30.769 0.00 0.00 0.00 2.32
26 27 8.374743 ACTGGCTATTTTGGTTTATTGAATTGT 58.625 29.630 0.00 0.00 0.00 2.71
27 28 9.868277 CTGGCTATTTTGGTTTATTGAATTGTA 57.132 29.630 0.00 0.00 0.00 2.41
75 76 9.883142 ATAAGAAAACAAAATCAACACTCCAAA 57.117 25.926 0.00 0.00 0.00 3.28
76 77 8.614469 AAGAAAACAAAATCAACACTCCAAAA 57.386 26.923 0.00 0.00 0.00 2.44
77 78 8.791327 AGAAAACAAAATCAACACTCCAAAAT 57.209 26.923 0.00 0.00 0.00 1.82
78 79 8.667463 AGAAAACAAAATCAACACTCCAAAATG 58.333 29.630 0.00 0.00 0.00 2.32
79 80 5.989551 ACAAAATCAACACTCCAAAATGC 57.010 34.783 0.00 0.00 0.00 3.56
80 81 5.673514 ACAAAATCAACACTCCAAAATGCT 58.326 33.333 0.00 0.00 0.00 3.79
81 82 6.114767 ACAAAATCAACACTCCAAAATGCTT 58.885 32.000 0.00 0.00 0.00 3.91
82 83 6.598850 ACAAAATCAACACTCCAAAATGCTTT 59.401 30.769 0.00 0.00 0.00 3.51
83 84 7.121020 ACAAAATCAACACTCCAAAATGCTTTT 59.879 29.630 0.00 0.00 0.00 2.27
99 100 7.701809 AATGCTTTTGAAAATGGCATTTTTG 57.298 28.000 32.09 21.47 46.88 2.44
100 101 5.589192 TGCTTTTGAAAATGGCATTTTTGG 58.411 33.333 32.09 21.64 42.15 3.28
101 102 5.359009 TGCTTTTGAAAATGGCATTTTTGGA 59.641 32.000 32.09 20.52 42.15 3.53
102 103 5.916320 GCTTTTGAAAATGGCATTTTTGGAG 59.084 36.000 32.09 25.93 42.15 3.86
103 104 5.435820 TTTGAAAATGGCATTTTTGGAGC 57.564 34.783 32.09 21.60 42.15 4.70
104 105 3.065655 TGAAAATGGCATTTTTGGAGCG 58.934 40.909 32.09 0.00 42.15 5.03
105 106 2.837532 AAATGGCATTTTTGGAGCGT 57.162 40.000 19.39 0.00 0.00 5.07
106 107 2.368655 AATGGCATTTTTGGAGCGTC 57.631 45.000 6.96 0.00 0.00 5.19
107 108 0.171007 ATGGCATTTTTGGAGCGTCG 59.829 50.000 0.00 0.00 0.00 5.12
108 109 0.886938 TGGCATTTTTGGAGCGTCGA 60.887 50.000 0.00 0.00 0.00 4.20
109 110 0.451783 GGCATTTTTGGAGCGTCGAT 59.548 50.000 0.00 0.00 0.00 3.59
110 111 1.135402 GGCATTTTTGGAGCGTCGATT 60.135 47.619 0.00 0.00 0.00 3.34
111 112 2.595386 GCATTTTTGGAGCGTCGATTT 58.405 42.857 0.00 0.00 0.00 2.17
112 113 2.986479 GCATTTTTGGAGCGTCGATTTT 59.014 40.909 0.00 0.00 0.00 1.82
113 114 3.428534 GCATTTTTGGAGCGTCGATTTTT 59.571 39.130 0.00 0.00 0.00 1.94
133 134 3.535280 TTTCTTTTTGCCACCACTTCC 57.465 42.857 0.00 0.00 0.00 3.46
134 135 2.151502 TCTTTTTGCCACCACTTCCA 57.848 45.000 0.00 0.00 0.00 3.53
135 136 1.754226 TCTTTTTGCCACCACTTCCAC 59.246 47.619 0.00 0.00 0.00 4.02
136 137 1.480137 CTTTTTGCCACCACTTCCACA 59.520 47.619 0.00 0.00 0.00 4.17
137 138 1.561643 TTTTGCCACCACTTCCACAA 58.438 45.000 0.00 0.00 0.00 3.33
138 139 1.561643 TTTGCCACCACTTCCACAAA 58.438 45.000 0.00 0.00 0.00 2.83
139 140 1.786937 TTGCCACCACTTCCACAAAT 58.213 45.000 0.00 0.00 0.00 2.32
140 141 2.666272 TGCCACCACTTCCACAAATA 57.334 45.000 0.00 0.00 0.00 1.40
141 142 3.168035 TGCCACCACTTCCACAAATAT 57.832 42.857 0.00 0.00 0.00 1.28
142 143 2.824936 TGCCACCACTTCCACAAATATG 59.175 45.455 0.00 0.00 0.00 1.78
143 144 3.088532 GCCACCACTTCCACAAATATGA 58.911 45.455 0.00 0.00 0.00 2.15
144 145 3.701040 GCCACCACTTCCACAAATATGAT 59.299 43.478 0.00 0.00 0.00 2.45
145 146 4.160252 GCCACCACTTCCACAAATATGATT 59.840 41.667 0.00 0.00 0.00 2.57
146 147 5.337491 GCCACCACTTCCACAAATATGATTT 60.337 40.000 0.00 0.00 0.00 2.17
147 148 6.332630 CCACCACTTCCACAAATATGATTTC 58.667 40.000 0.00 0.00 0.00 2.17
148 149 6.153340 CCACCACTTCCACAAATATGATTTCT 59.847 38.462 0.00 0.00 0.00 2.52
149 150 7.309990 CCACCACTTCCACAAATATGATTTCTT 60.310 37.037 0.00 0.00 0.00 2.52
150 151 7.543172 CACCACTTCCACAAATATGATTTCTTG 59.457 37.037 0.00 0.00 0.00 3.02
151 152 7.451255 ACCACTTCCACAAATATGATTTCTTGA 59.549 33.333 0.00 0.00 0.00 3.02
152 153 8.472413 CCACTTCCACAAATATGATTTCTTGAT 58.528 33.333 0.00 0.00 0.00 2.57
153 154 9.297586 CACTTCCACAAATATGATTTCTTGATG 57.702 33.333 0.00 0.00 0.00 3.07
154 155 9.246670 ACTTCCACAAATATGATTTCTTGATGA 57.753 29.630 0.00 0.00 0.00 2.92
166 167 5.927954 TTTCTTGATGAAATTTGGCAAGC 57.072 34.783 14.68 0.00 39.50 4.01
167 168 4.603989 TCTTGATGAAATTTGGCAAGCA 57.396 36.364 14.68 0.00 36.72 3.91
168 169 4.309099 TCTTGATGAAATTTGGCAAGCAC 58.691 39.130 14.68 0.00 36.72 4.40
169 170 3.747854 TGATGAAATTTGGCAAGCACA 57.252 38.095 0.00 0.71 0.00 4.57
170 171 3.391965 TGATGAAATTTGGCAAGCACAC 58.608 40.909 0.00 0.00 0.00 3.82
171 172 2.975732 TGAAATTTGGCAAGCACACA 57.024 40.000 0.00 0.00 0.00 3.72
172 173 2.823984 TGAAATTTGGCAAGCACACAG 58.176 42.857 0.00 0.00 0.00 3.66
173 174 2.429971 TGAAATTTGGCAAGCACACAGA 59.570 40.909 0.00 0.00 0.00 3.41
174 175 3.118847 TGAAATTTGGCAAGCACACAGAA 60.119 39.130 0.00 0.00 0.00 3.02
175 176 3.540314 AATTTGGCAAGCACACAGAAA 57.460 38.095 0.00 0.00 0.00 2.52
176 177 3.540314 ATTTGGCAAGCACACAGAAAA 57.460 38.095 0.00 0.00 0.00 2.29
177 178 2.582728 TTGGCAAGCACACAGAAAAG 57.417 45.000 0.00 0.00 0.00 2.27
178 179 1.473258 TGGCAAGCACACAGAAAAGT 58.527 45.000 0.00 0.00 0.00 2.66
179 180 1.824230 TGGCAAGCACACAGAAAAGTT 59.176 42.857 0.00 0.00 0.00 2.66
180 181 2.195922 GGCAAGCACACAGAAAAGTTG 58.804 47.619 0.00 0.00 0.00 3.16
181 182 1.589779 GCAAGCACACAGAAAAGTTGC 59.410 47.619 0.00 0.00 32.80 4.17
182 183 2.195922 CAAGCACACAGAAAAGTTGCC 58.804 47.619 0.00 0.00 0.00 4.52
183 184 1.473258 AGCACACAGAAAAGTTGCCA 58.527 45.000 0.00 0.00 0.00 4.92
184 185 1.824230 AGCACACAGAAAAGTTGCCAA 59.176 42.857 0.00 0.00 0.00 4.52
185 186 2.431782 AGCACACAGAAAAGTTGCCAAT 59.568 40.909 0.00 0.00 0.00 3.16
186 187 2.540931 GCACACAGAAAAGTTGCCAATG 59.459 45.455 0.00 0.00 0.00 2.82
187 188 3.784338 CACACAGAAAAGTTGCCAATGT 58.216 40.909 0.00 0.00 0.00 2.71
188 189 4.183101 CACACAGAAAAGTTGCCAATGTT 58.817 39.130 0.00 0.00 0.00 2.71
189 190 4.630940 CACACAGAAAAGTTGCCAATGTTT 59.369 37.500 0.00 0.00 0.00 2.83
190 191 4.869861 ACACAGAAAAGTTGCCAATGTTTC 59.130 37.500 7.39 7.39 0.00 2.78
191 192 4.026640 CACAGAAAAGTTGCCAATGTTTCG 60.027 41.667 9.01 7.54 34.21 3.46
192 193 3.060339 CAGAAAAGTTGCCAATGTTTCGC 60.060 43.478 9.01 0.00 34.21 4.70
193 194 2.593346 AAAGTTGCCAATGTTTCGCA 57.407 40.000 0.00 0.00 0.00 5.10
194 195 1.851658 AAGTTGCCAATGTTTCGCAC 58.148 45.000 0.00 0.00 30.84 5.34
195 196 0.743688 AGTTGCCAATGTTTCGCACA 59.256 45.000 0.00 0.00 40.71 4.57
196 197 1.135915 AGTTGCCAATGTTTCGCACAA 59.864 42.857 0.00 0.00 39.50 3.33
197 198 1.929836 GTTGCCAATGTTTCGCACAAA 59.070 42.857 0.00 0.00 39.50 2.83
198 199 1.565305 TGCCAATGTTTCGCACAAAC 58.435 45.000 1.99 1.99 39.50 2.93
199 200 1.134995 TGCCAATGTTTCGCACAAACA 60.135 42.857 12.13 12.13 43.33 2.83
200 201 1.929836 GCCAATGTTTCGCACAAACAA 59.070 42.857 13.40 0.68 42.57 2.83
201 202 2.349886 GCCAATGTTTCGCACAAACAAA 59.650 40.909 13.40 0.00 42.57 2.83
202 203 3.181516 GCCAATGTTTCGCACAAACAAAA 60.182 39.130 13.40 0.00 42.57 2.44
203 204 4.495514 GCCAATGTTTCGCACAAACAAAAT 60.496 37.500 13.40 3.07 42.57 1.82
204 205 5.567552 CCAATGTTTCGCACAAACAAAATT 58.432 33.333 13.40 3.35 42.57 1.82
205 206 5.676310 CCAATGTTTCGCACAAACAAAATTC 59.324 36.000 13.40 0.00 42.57 2.17
206 207 6.246449 CAATGTTTCGCACAAACAAAATTCA 58.754 32.000 13.40 0.00 42.57 2.57
207 208 5.447478 TGTTTCGCACAAACAAAATTCAG 57.553 34.783 8.21 0.00 37.22 3.02
208 209 5.164233 TGTTTCGCACAAACAAAATTCAGA 58.836 33.333 8.21 0.00 37.22 3.27
209 210 5.635280 TGTTTCGCACAAACAAAATTCAGAA 59.365 32.000 8.21 0.00 37.22 3.02
210 211 6.312426 TGTTTCGCACAAACAAAATTCAGAAT 59.688 30.769 8.21 0.00 37.22 2.40
211 212 6.900568 TTCGCACAAACAAAATTCAGAATT 57.099 29.167 2.20 2.20 0.00 2.17
212 213 7.993821 TTCGCACAAACAAAATTCAGAATTA 57.006 28.000 8.88 0.00 0.00 1.40
213 214 8.586570 TTCGCACAAACAAAATTCAGAATTAT 57.413 26.923 8.88 0.00 0.00 1.28
214 215 8.586570 TCGCACAAACAAAATTCAGAATTATT 57.413 26.923 8.88 3.71 0.00 1.40
215 216 9.039870 TCGCACAAACAAAATTCAGAATTATTT 57.960 25.926 8.88 7.60 0.00 1.40
216 217 9.094459 CGCACAAACAAAATTCAGAATTATTTG 57.906 29.630 23.36 23.36 36.01 2.32
283 284 7.563020 TCATTTGAGCTTGATCTGAGAATAGT 58.437 34.615 0.00 0.00 0.00 2.12
285 286 7.606858 TTTGAGCTTGATCTGAGAATAGTTG 57.393 36.000 0.00 0.00 0.00 3.16
327 332 7.119116 AGCTATTGTTCACATCGTGATTTGTAA 59.881 33.333 0.00 0.00 42.40 2.41
338 344 9.528018 ACATCGTGATTTGTAATTTTTGTTTCT 57.472 25.926 0.00 0.00 0.00 2.52
554 716 3.987745 ACTCCTTCCATCTCTCTTGCTA 58.012 45.455 0.00 0.00 0.00 3.49
584 746 9.474313 AGAATTTCTCCTAGCATATACTCCTAG 57.526 37.037 0.00 0.00 0.00 3.02
585 747 9.250246 GAATTTCTCCTAGCATATACTCCTAGT 57.750 37.037 0.00 0.00 0.00 2.57
625 787 9.953565 AAATGCTCTGGTGTAATTACTAGTTAA 57.046 29.630 16.33 0.00 31.80 2.01
798 985 3.900601 ACAAACTGAGAGAGTGAGATGGT 59.099 43.478 0.00 0.00 34.02 3.55
815 1012 0.750182 GGTCTGAGAGGGAGGTCTCG 60.750 65.000 0.00 0.00 45.28 4.04
833 1030 0.318107 CGTGTCTTGCTTTGCCTTGG 60.318 55.000 0.00 0.00 0.00 3.61
834 1031 1.032014 GTGTCTTGCTTTGCCTTGGA 58.968 50.000 0.00 0.00 0.00 3.53
860 1057 2.158959 CACCGTCGTCGATGCCTTC 61.159 63.158 9.02 0.00 39.71 3.46
895 1092 2.697751 AGGTGAGCTGATCCAGTGATAC 59.302 50.000 0.00 0.00 33.43 2.24
913 1110 7.011202 CAGTGATACTCATGGATTCTTTGTCTG 59.989 40.741 0.00 0.00 0.00 3.51
953 1150 0.322636 TCCCTCACCGACTCACTCTC 60.323 60.000 0.00 0.00 0.00 3.20
956 1153 1.529226 CTCACCGACTCACTCTCTGT 58.471 55.000 0.00 0.00 0.00 3.41
958 1155 0.523966 CACCGACTCACTCTCTGTCC 59.476 60.000 0.00 0.00 0.00 4.02
1005 1202 0.953960 ACCCGCTCGACAAAATGTCC 60.954 55.000 5.00 0.00 44.20 4.02
1010 1207 0.366871 CTCGACAAAATGTCCGAGCG 59.633 55.000 14.53 2.28 44.20 5.03
1104 1301 2.092323 CTCCTCCTACACGTGATGTCA 58.908 52.381 25.01 0.55 42.09 3.58
1110 1307 3.513912 TCCTACACGTGATGTCATTCCTT 59.486 43.478 25.01 0.00 42.09 3.36
1113 1310 1.131126 CACGTGATGTCATTCCTTGCC 59.869 52.381 10.90 0.00 0.00 4.52
1260 1457 1.004918 CAACCTTCTTCGCCTCCGT 60.005 57.895 0.00 0.00 35.54 4.69
1344 1541 6.035327 CCGGTAAGACGTTTCGAAGAATAATT 59.965 38.462 0.00 0.00 45.90 1.40
1381 1578 2.680913 GCCGCGTCATGTCAAGCTT 61.681 57.895 4.92 0.00 0.00 3.74
1385 1582 1.503542 CGTCATGTCAAGCTTGGGC 59.496 57.895 25.73 18.46 39.06 5.36
1391 1588 2.112928 TCAAGCTTGGGCGCTTCA 59.887 55.556 25.73 3.23 46.68 3.02
1395 1592 0.681175 AAGCTTGGGCGCTTCAAATT 59.319 45.000 7.64 7.66 46.68 1.82
1475 1672 0.674581 TTCAGCCGCATGACCTTCTG 60.675 55.000 0.00 0.00 0.00 3.02
1492 1689 2.086251 CTGCGGAGGCTCTCTGGATC 62.086 65.000 15.23 0.00 36.66 3.36
1505 1702 2.279120 GGATCTGTCGAGCTGCCG 60.279 66.667 0.00 0.00 0.00 5.69
1522 1719 0.888619 CCGTGTGCTAGAGGAGTTGA 59.111 55.000 0.00 0.00 0.00 3.18
1543 1740 4.260194 TGTCAGGTTGCGACATCG 57.740 55.556 6.39 0.00 38.45 3.84
1676 1873 2.886523 TGACTGCAATGGAAGGTTTGAG 59.113 45.455 0.00 0.00 0.00 3.02
1714 1911 1.140652 TGCCATCATTGGTAGCATCGA 59.859 47.619 0.00 0.00 45.57 3.59
1717 1914 3.254166 GCCATCATTGGTAGCATCGATTT 59.746 43.478 0.00 0.00 45.57 2.17
1755 1952 2.726373 CGACGATGAGTGTGACTCTGAC 60.726 54.545 5.39 0.00 45.27 3.51
1868 2065 3.020984 ACACCCTACAGTTTGTTTGTGG 58.979 45.455 0.00 0.00 30.99 4.17
1906 2465 2.497273 GCCGGTACTTGGGTACTCTTTA 59.503 50.000 1.90 0.00 45.41 1.85
1907 2466 3.429960 GCCGGTACTTGGGTACTCTTTAG 60.430 52.174 1.90 0.00 45.41 1.85
1908 2467 3.766051 CCGGTACTTGGGTACTCTTTAGT 59.234 47.826 0.00 0.00 45.41 2.24
1909 2468 4.142293 CCGGTACTTGGGTACTCTTTAGTC 60.142 50.000 0.00 0.00 45.41 2.59
2006 2575 1.351350 GTCCAGGGACTTGCTAAACCT 59.649 52.381 11.21 0.00 41.57 3.50
2037 2606 3.357203 TGCCCAGTTTATATTTTCGCCA 58.643 40.909 0.00 0.00 0.00 5.69
2045 2614 8.967218 CCAGTTTATATTTTCGCCATATGTTTG 58.033 33.333 1.24 0.00 0.00 2.93
2072 2642 8.547069 GCAAGTTTAAAATGTTGTTGCTCAATA 58.453 29.630 2.84 0.00 38.38 1.90
2082 2652 2.293122 TGTTGCTCAATAACTGGTGTGC 59.707 45.455 0.00 0.00 35.38 4.57
2097 2667 0.245266 TGTGCGGCTAATGACTTCGA 59.755 50.000 0.00 0.00 0.00 3.71
2098 2668 0.924090 GTGCGGCTAATGACTTCGAG 59.076 55.000 0.00 0.00 0.00 4.04
2099 2669 0.179111 TGCGGCTAATGACTTCGAGG 60.179 55.000 0.00 0.00 0.00 4.63
2101 2671 0.876342 CGGCTAATGACTTCGAGGGC 60.876 60.000 0.00 0.00 0.00 5.19
2103 2673 1.491505 GCTAATGACTTCGAGGGCGC 61.492 60.000 0.00 0.00 37.46 6.53
2104 2674 0.179111 CTAATGACTTCGAGGGCGCA 60.179 55.000 10.83 0.00 37.46 6.09
2105 2675 0.248012 TAATGACTTCGAGGGCGCAA 59.752 50.000 10.83 0.00 37.46 4.85
2106 2676 0.605319 AATGACTTCGAGGGCGCAAA 60.605 50.000 10.83 0.00 37.46 3.68
2107 2677 1.021390 ATGACTTCGAGGGCGCAAAG 61.021 55.000 10.83 6.94 37.46 2.77
2119 2689 2.964978 GCAAAGCTGGCGGAACAT 59.035 55.556 0.00 0.00 0.00 2.71
2120 2690 1.290009 GCAAAGCTGGCGGAACATT 59.710 52.632 0.00 0.00 0.00 2.71
2121 2691 0.733909 GCAAAGCTGGCGGAACATTC 60.734 55.000 0.00 0.00 0.00 2.67
2122 2692 0.454957 CAAAGCTGGCGGAACATTCG 60.455 55.000 0.00 0.00 0.00 3.34
2123 2693 0.889186 AAAGCTGGCGGAACATTCGT 60.889 50.000 0.00 0.00 0.00 3.85
2124 2694 1.577328 AAGCTGGCGGAACATTCGTG 61.577 55.000 0.00 0.00 0.00 4.35
2125 2695 2.480555 CTGGCGGAACATTCGTGC 59.519 61.111 0.00 0.27 0.00 5.34
2126 2696 2.031919 TGGCGGAACATTCGTGCT 59.968 55.556 7.22 0.00 32.13 4.40
2127 2697 1.577328 CTGGCGGAACATTCGTGCTT 61.577 55.000 7.22 0.00 32.13 3.91
2128 2698 1.154225 GGCGGAACATTCGTGCTTG 60.154 57.895 7.22 0.00 32.13 4.01
2129 2699 1.574428 GCGGAACATTCGTGCTTGT 59.426 52.632 1.49 0.00 0.00 3.16
2130 2700 0.452784 GCGGAACATTCGTGCTTGTC 60.453 55.000 1.49 0.00 0.00 3.18
2131 2701 0.865111 CGGAACATTCGTGCTTGTCA 59.135 50.000 0.00 0.00 0.00 3.58
2132 2702 1.262950 CGGAACATTCGTGCTTGTCAA 59.737 47.619 0.00 0.00 0.00 3.18
2133 2703 2.662791 CGGAACATTCGTGCTTGTCAAG 60.663 50.000 8.31 8.31 0.00 3.02
2142 2712 4.929198 CTTGTCAAGCTGCCGTTG 57.071 55.556 0.00 0.00 0.00 4.10
2143 2713 2.024918 CTTGTCAAGCTGCCGTTGT 58.975 52.632 0.00 0.00 0.00 3.32
2144 2714 0.381801 CTTGTCAAGCTGCCGTTGTT 59.618 50.000 0.00 0.00 0.00 2.83
2145 2715 0.100325 TTGTCAAGCTGCCGTTGTTG 59.900 50.000 0.00 0.00 0.00 3.33
2146 2716 1.008538 GTCAAGCTGCCGTTGTTGG 60.009 57.895 0.00 0.00 0.00 3.77
2157 2727 2.820330 CCGTTGTTGGCATTTTTGTCT 58.180 42.857 0.00 0.00 0.00 3.41
2158 2728 3.194062 CCGTTGTTGGCATTTTTGTCTT 58.806 40.909 0.00 0.00 0.00 3.01
2159 2729 3.245048 CCGTTGTTGGCATTTTTGTCTTC 59.755 43.478 0.00 0.00 0.00 2.87
2160 2730 4.111916 CGTTGTTGGCATTTTTGTCTTCT 58.888 39.130 0.00 0.00 0.00 2.85
2161 2731 4.566360 CGTTGTTGGCATTTTTGTCTTCTT 59.434 37.500 0.00 0.00 0.00 2.52
2162 2732 5.063312 CGTTGTTGGCATTTTTGTCTTCTTT 59.937 36.000 0.00 0.00 0.00 2.52
2163 2733 6.402011 CGTTGTTGGCATTTTTGTCTTCTTTT 60.402 34.615 0.00 0.00 0.00 2.27
2164 2734 7.304735 GTTGTTGGCATTTTTGTCTTCTTTTT 58.695 30.769 0.00 0.00 0.00 1.94
2181 2751 2.861462 TTTTCTTCGGGCTTGTTGTG 57.139 45.000 0.00 0.00 0.00 3.33
2182 2752 0.383949 TTTCTTCGGGCTTGTTGTGC 59.616 50.000 0.00 0.00 0.00 4.57
2188 2758 2.051345 GGCTTGTTGTGCCGTTCG 60.051 61.111 0.00 0.00 41.03 3.95
2189 2759 2.725815 GCTTGTTGTGCCGTTCGC 60.726 61.111 0.00 0.00 38.31 4.70
2190 2760 2.051345 CTTGTTGTGCCGTTCGCC 60.051 61.111 0.00 0.00 36.24 5.54
2191 2761 3.536498 CTTGTTGTGCCGTTCGCCC 62.536 63.158 0.00 0.00 36.24 6.13
2200 2770 4.745751 CGTTCGCCCCGGCAGTTA 62.746 66.667 6.52 0.00 42.06 2.24
2201 2771 3.122971 GTTCGCCCCGGCAGTTAC 61.123 66.667 6.52 0.00 42.06 2.50
2202 2772 4.397832 TTCGCCCCGGCAGTTACC 62.398 66.667 6.52 0.00 42.06 2.85
2204 2774 4.404098 CGCCCCGGCAGTTACCTT 62.404 66.667 6.52 0.00 42.06 3.50
2205 2775 2.750237 GCCCCGGCAGTTACCTTG 60.750 66.667 0.00 0.00 41.49 3.61
2206 2776 2.754375 CCCCGGCAGTTACCTTGT 59.246 61.111 0.00 0.00 0.00 3.16
2207 2777 1.674322 CCCCGGCAGTTACCTTGTG 60.674 63.158 0.00 0.00 0.00 3.33
2208 2778 1.373435 CCCGGCAGTTACCTTGTGA 59.627 57.895 0.00 0.00 0.00 3.58
2209 2779 0.035439 CCCGGCAGTTACCTTGTGAT 60.035 55.000 0.00 0.00 0.00 3.06
2210 2780 1.369625 CCGGCAGTTACCTTGTGATC 58.630 55.000 0.00 0.00 0.00 2.92
2211 2781 0.999406 CGGCAGTTACCTTGTGATCG 59.001 55.000 0.00 0.00 0.00 3.69
2212 2782 1.369625 GGCAGTTACCTTGTGATCGG 58.630 55.000 0.00 0.00 0.00 4.18
2213 2783 1.338769 GGCAGTTACCTTGTGATCGGT 60.339 52.381 0.00 0.00 37.31 4.69
2214 2784 1.732259 GCAGTTACCTTGTGATCGGTG 59.268 52.381 0.66 0.00 34.76 4.94
2215 2785 2.870435 GCAGTTACCTTGTGATCGGTGT 60.870 50.000 0.66 0.00 34.76 4.16
2216 2786 3.399330 CAGTTACCTTGTGATCGGTGTT 58.601 45.455 0.66 0.00 34.76 3.32
2217 2787 3.432252 CAGTTACCTTGTGATCGGTGTTC 59.568 47.826 0.66 0.00 34.76 3.18
2218 2788 2.357327 TACCTTGTGATCGGTGTTCG 57.643 50.000 0.66 0.00 40.90 3.95
2219 2789 0.391597 ACCTTGTGATCGGTGTTCGT 59.608 50.000 0.00 0.00 40.32 3.85
2220 2790 0.790207 CCTTGTGATCGGTGTTCGTG 59.210 55.000 0.00 0.00 40.32 4.35
2221 2791 0.163788 CTTGTGATCGGTGTTCGTGC 59.836 55.000 0.00 0.00 40.32 5.34
2222 2792 0.249699 TTGTGATCGGTGTTCGTGCT 60.250 50.000 0.00 0.00 40.32 4.40
2223 2793 0.249699 TGTGATCGGTGTTCGTGCTT 60.250 50.000 0.00 0.00 40.32 3.91
2224 2794 0.865769 GTGATCGGTGTTCGTGCTTT 59.134 50.000 0.00 0.00 40.32 3.51
2225 2795 2.063266 GTGATCGGTGTTCGTGCTTTA 58.937 47.619 0.00 0.00 40.32 1.85
2226 2796 2.671396 GTGATCGGTGTTCGTGCTTTAT 59.329 45.455 0.00 0.00 40.32 1.40
2227 2797 3.861113 GTGATCGGTGTTCGTGCTTTATA 59.139 43.478 0.00 0.00 40.32 0.98
2228 2798 4.327898 GTGATCGGTGTTCGTGCTTTATAA 59.672 41.667 0.00 0.00 40.32 0.98
2229 2799 5.006358 GTGATCGGTGTTCGTGCTTTATAAT 59.994 40.000 0.00 0.00 40.32 1.28
2230 2800 6.199531 GTGATCGGTGTTCGTGCTTTATAATA 59.800 38.462 0.00 0.00 40.32 0.98
2231 2801 6.926826 TGATCGGTGTTCGTGCTTTATAATAT 59.073 34.615 0.00 0.00 40.32 1.28
2232 2802 8.083462 TGATCGGTGTTCGTGCTTTATAATATA 58.917 33.333 0.00 0.00 40.32 0.86
2233 2803 8.821147 ATCGGTGTTCGTGCTTTATAATATAA 57.179 30.769 0.00 0.00 40.32 0.98
2234 2804 8.645730 TCGGTGTTCGTGCTTTATAATATAAA 57.354 30.769 5.46 5.46 40.32 1.40
2235 2805 8.757789 TCGGTGTTCGTGCTTTATAATATAAAG 58.242 33.333 22.11 22.11 40.32 1.85
2236 2806 8.545420 CGGTGTTCGTGCTTTATAATATAAAGT 58.455 33.333 25.08 0.00 37.00 2.66
2237 2807 9.646336 GGTGTTCGTGCTTTATAATATAAAGTG 57.354 33.333 25.08 18.02 37.00 3.16
2238 2808 9.646336 GTGTTCGTGCTTTATAATATAAAGTGG 57.354 33.333 25.08 17.40 37.00 4.00
2239 2809 8.832521 TGTTCGTGCTTTATAATATAAAGTGGG 58.167 33.333 25.08 17.15 37.00 4.61
2240 2810 7.972832 TCGTGCTTTATAATATAAAGTGGGG 57.027 36.000 25.08 15.93 37.00 4.96
2241 2811 7.737869 TCGTGCTTTATAATATAAAGTGGGGA 58.262 34.615 25.08 17.31 37.00 4.81
2242 2812 8.212312 TCGTGCTTTATAATATAAAGTGGGGAA 58.788 33.333 25.08 10.49 37.00 3.97
2243 2813 8.842280 CGTGCTTTATAATATAAAGTGGGGAAA 58.158 33.333 25.08 7.86 37.00 3.13
2246 2816 9.976511 GCTTTATAATATAAAGTGGGGAAAACC 57.023 33.333 25.08 8.44 37.00 3.27
2260 2830 4.449131 GGGAAAACCCTATTTCGTCTAGG 58.551 47.826 0.00 0.00 39.64 3.02
2278 2848 6.985653 TCTAGGATTCACCAATTCTAGAGG 57.014 41.667 8.20 0.00 46.33 3.69
2285 2855 3.388024 TCACCAATTCTAGAGGCGCTTAT 59.612 43.478 7.64 0.00 0.00 1.73
2307 2877 4.898320 TGCTTCAGCTTGATTCTGAACTA 58.102 39.130 0.00 0.00 43.34 2.24
2311 2881 5.728637 TCAGCTTGATTCTGAACTAGTGA 57.271 39.130 0.00 0.00 37.61 3.41
2313 2883 5.478332 TCAGCTTGATTCTGAACTAGTGAGA 59.522 40.000 0.00 0.00 37.61 3.27
2376 2958 2.948979 TGCGTTTTGTTGACTTCAGGAT 59.051 40.909 0.00 0.00 0.00 3.24
2377 2959 3.003275 TGCGTTTTGTTGACTTCAGGATC 59.997 43.478 0.00 0.00 0.00 3.36
2395 3014 3.127721 GGATCAAAGCTGTAACTCAAGGC 59.872 47.826 0.00 0.00 0.00 4.35
2414 3033 2.381589 GCCGCAAGTTTACAACTCAAC 58.618 47.619 0.00 0.00 41.91 3.18
2415 3034 2.032924 GCCGCAAGTTTACAACTCAACT 59.967 45.455 0.00 0.00 41.91 3.16
2416 3035 3.249080 GCCGCAAGTTTACAACTCAACTA 59.751 43.478 0.00 0.00 41.91 2.24
2417 3036 4.769215 CCGCAAGTTTACAACTCAACTAC 58.231 43.478 0.00 0.00 41.91 2.73
2418 3037 4.510340 CCGCAAGTTTACAACTCAACTACT 59.490 41.667 0.00 0.00 41.91 2.57
2419 3038 5.333111 CCGCAAGTTTACAACTCAACTACTC 60.333 44.000 0.00 0.00 41.91 2.59
2420 3039 5.233476 CGCAAGTTTACAACTCAACTACTCA 59.767 40.000 0.00 0.00 41.91 3.41
2421 3040 6.237996 CGCAAGTTTACAACTCAACTACTCAA 60.238 38.462 0.00 0.00 41.91 3.02
2422 3041 7.469260 GCAAGTTTACAACTCAACTACTCAAA 58.531 34.615 0.00 0.00 41.91 2.69
2423 3042 7.640240 GCAAGTTTACAACTCAACTACTCAAAG 59.360 37.037 0.00 0.00 41.91 2.77
2428 3047 5.123936 ACAACTCAACTACTCAAAGGGAAC 58.876 41.667 0.00 0.00 0.00 3.62
2435 3054 5.568620 ACTACTCAAAGGGAACAATCACT 57.431 39.130 0.00 0.00 42.67 3.41
2460 3079 1.550524 TCGCAGCATCTCAAGGTAGTT 59.449 47.619 0.00 0.00 0.00 2.24
2466 3085 6.403636 CGCAGCATCTCAAGGTAGTTAAAATT 60.404 38.462 0.00 0.00 0.00 1.82
2467 3086 6.749118 GCAGCATCTCAAGGTAGTTAAAATTG 59.251 38.462 0.00 0.00 0.00 2.32
2508 3127 8.588290 AAAATGTAATAGTTGACCCAATAGCA 57.412 30.769 0.00 0.00 0.00 3.49
2522 3141 0.902531 ATAGCAACCGTAGTGCACCT 59.097 50.000 14.63 3.06 0.00 4.00
2569 3188 1.203288 TGACCTTACCTACCGGGGAAA 60.203 52.381 6.32 0.00 37.49 3.13
2570 3189 2.121948 GACCTTACCTACCGGGGAAAT 58.878 52.381 6.32 0.00 37.49 2.17
2575 3194 1.969713 ACCTACCGGGGAAATAACCA 58.030 50.000 6.32 0.00 40.03 3.67
2576 3195 1.841919 ACCTACCGGGGAAATAACCAG 59.158 52.381 6.32 0.00 40.03 4.00
2577 3196 1.476291 CCTACCGGGGAAATAACCAGC 60.476 57.143 6.32 0.00 0.00 4.85
2578 3197 1.210967 CTACCGGGGAAATAACCAGCA 59.789 52.381 6.32 0.00 0.00 4.41
2579 3198 0.629058 ACCGGGGAAATAACCAGCAT 59.371 50.000 6.32 0.00 0.00 3.79
2580 3199 1.032014 CCGGGGAAATAACCAGCATG 58.968 55.000 0.00 0.00 0.00 4.06
2590 3209 0.252479 AACCAGCATGAGCAGAGAGG 59.748 55.000 0.00 0.00 45.49 3.69
2640 3261 7.829725 TGAACTTTATGCATGATTAGCAAAGT 58.170 30.769 10.16 12.13 46.27 2.66
2641 3262 8.306038 TGAACTTTATGCATGATTAGCAAAGTT 58.694 29.630 24.07 24.07 46.96 2.66
2642 3263 9.143631 GAACTTTATGCATGATTAGCAAAGTTT 57.856 29.630 24.40 14.42 45.58 2.66
2643 3264 9.492973 AACTTTATGCATGATTAGCAAAGTTTT 57.507 25.926 20.66 7.50 44.34 2.43
2644 3265 9.492973 ACTTTATGCATGATTAGCAAAGTTTTT 57.507 25.926 10.16 0.00 46.27 1.94
2668 3289 7.776618 TTTTAAAGAAAAGAGGAAGATCCCC 57.223 36.000 0.00 0.00 31.83 4.81
2669 3290 3.636153 AAGAAAAGAGGAAGATCCCCG 57.364 47.619 0.00 0.00 37.19 5.73
2670 3291 1.840635 AGAAAAGAGGAAGATCCCCGG 59.159 52.381 0.00 0.00 37.19 5.73
2671 3292 0.256177 AAAAGAGGAAGATCCCCGGC 59.744 55.000 0.00 0.00 37.19 6.13
2672 3293 1.636769 AAAGAGGAAGATCCCCGGCC 61.637 60.000 0.00 0.00 37.19 6.13
2673 3294 2.446802 GAGGAAGATCCCCGGCCT 60.447 66.667 0.00 0.00 37.19 5.19
2674 3295 2.446802 AGGAAGATCCCCGGCCTC 60.447 66.667 0.00 0.00 37.19 4.70
2675 3296 2.446802 GGAAGATCCCCGGCCTCT 60.447 66.667 0.00 0.00 0.00 3.69
2676 3297 2.812619 GGAAGATCCCCGGCCTCTG 61.813 68.421 0.00 0.00 0.00 3.35
2677 3298 3.468326 GAAGATCCCCGGCCTCTGC 62.468 68.421 0.00 0.00 0.00 4.26
2678 3299 4.804420 AGATCCCCGGCCTCTGCA 62.804 66.667 0.00 0.00 40.13 4.41
2679 3300 3.564218 GATCCCCGGCCTCTGCAT 61.564 66.667 0.00 0.00 40.13 3.96
2680 3301 3.543536 GATCCCCGGCCTCTGCATC 62.544 68.421 0.00 0.00 40.13 3.91
2682 3303 4.559063 CCCCGGCCTCTGCATCAG 62.559 72.222 0.00 0.00 40.13 2.90
2683 3304 3.473647 CCCGGCCTCTGCATCAGA 61.474 66.667 0.00 0.00 38.25 3.27
2684 3305 2.586245 CCGGCCTCTGCATCAGAA 59.414 61.111 0.00 0.00 40.18 3.02
2685 3306 1.817099 CCGGCCTCTGCATCAGAAC 60.817 63.158 0.00 0.00 40.18 3.01
2686 3307 2.169789 CGGCCTCTGCATCAGAACG 61.170 63.158 0.00 0.63 40.18 3.95
2687 3308 1.219124 GGCCTCTGCATCAGAACGA 59.781 57.895 0.00 0.00 40.18 3.85
2688 3309 0.179062 GGCCTCTGCATCAGAACGAT 60.179 55.000 0.00 0.00 40.18 3.73
2697 3318 1.193203 CATCAGAACGATGCATACGGC 59.807 52.381 18.34 11.86 44.95 5.68
2698 3319 0.529773 TCAGAACGATGCATACGGCC 60.530 55.000 18.34 0.00 43.89 6.13
2699 3320 0.809636 CAGAACGATGCATACGGCCA 60.810 55.000 18.34 0.00 43.89 5.36
2700 3321 0.810031 AGAACGATGCATACGGCCAC 60.810 55.000 18.34 9.37 43.89 5.01
2701 3322 1.078778 AACGATGCATACGGCCACA 60.079 52.632 18.34 0.00 43.89 4.17
2702 3323 0.463654 AACGATGCATACGGCCACAT 60.464 50.000 18.34 0.00 43.89 3.21
2703 3324 0.463654 ACGATGCATACGGCCACATT 60.464 50.000 18.34 0.00 43.89 2.71
2704 3325 0.662619 CGATGCATACGGCCACATTT 59.337 50.000 2.24 0.00 43.89 2.32
2705 3326 1.870402 CGATGCATACGGCCACATTTA 59.130 47.619 2.24 0.00 43.89 1.40
2706 3327 2.483877 CGATGCATACGGCCACATTTAT 59.516 45.455 2.24 0.00 43.89 1.40
2707 3328 3.058293 CGATGCATACGGCCACATTTATT 60.058 43.478 2.24 0.00 43.89 1.40
2708 3329 4.153296 CGATGCATACGGCCACATTTATTA 59.847 41.667 2.24 0.00 43.89 0.98
2709 3330 5.334491 CGATGCATACGGCCACATTTATTAA 60.334 40.000 2.24 0.00 43.89 1.40
2710 3331 5.836821 TGCATACGGCCACATTTATTAAA 57.163 34.783 2.24 0.00 43.89 1.52
2711 3332 6.208988 TGCATACGGCCACATTTATTAAAA 57.791 33.333 2.24 0.00 43.89 1.52
2712 3333 6.631016 TGCATACGGCCACATTTATTAAAAA 58.369 32.000 2.24 0.00 43.89 1.94
2713 3334 6.754209 TGCATACGGCCACATTTATTAAAAAG 59.246 34.615 2.24 0.00 43.89 2.27
2714 3335 6.292114 GCATACGGCCACATTTATTAAAAAGC 60.292 38.462 2.24 0.00 36.11 3.51
2715 3336 5.140747 ACGGCCACATTTATTAAAAAGCA 57.859 34.783 2.24 0.00 0.00 3.91
2716 3337 5.542779 ACGGCCACATTTATTAAAAAGCAA 58.457 33.333 2.24 0.00 0.00 3.91
2717 3338 5.992217 ACGGCCACATTTATTAAAAAGCAAA 59.008 32.000 2.24 0.00 0.00 3.68
2718 3339 6.652900 ACGGCCACATTTATTAAAAAGCAAAT 59.347 30.769 2.24 0.00 0.00 2.32
2719 3340 7.819900 ACGGCCACATTTATTAAAAAGCAAATA 59.180 29.630 2.24 0.00 0.00 1.40
2720 3341 8.660373 CGGCCACATTTATTAAAAAGCAAATAA 58.340 29.630 2.24 0.00 0.00 1.40
2721 3342 9.986833 GGCCACATTTATTAAAAAGCAAATAAG 57.013 29.630 0.00 0.00 31.21 1.73
2734 3355 9.476202 AAAAAGCAAATAAGTTCAACATAGGTC 57.524 29.630 0.00 0.00 0.00 3.85
2735 3356 6.759497 AGCAAATAAGTTCAACATAGGTCC 57.241 37.500 0.00 0.00 0.00 4.46
2736 3357 6.485171 AGCAAATAAGTTCAACATAGGTCCT 58.515 36.000 0.00 0.00 0.00 3.85
2737 3358 6.599638 AGCAAATAAGTTCAACATAGGTCCTC 59.400 38.462 0.00 0.00 0.00 3.71
2738 3359 6.374333 GCAAATAAGTTCAACATAGGTCCTCA 59.626 38.462 0.00 0.00 0.00 3.86
2739 3360 7.094377 GCAAATAAGTTCAACATAGGTCCTCAA 60.094 37.037 0.00 0.00 0.00 3.02
2740 3361 7.923414 AATAAGTTCAACATAGGTCCTCAAC 57.077 36.000 0.00 0.00 0.00 3.18
2741 3362 5.568620 AAGTTCAACATAGGTCCTCAACT 57.431 39.130 0.00 0.00 0.00 3.16
2742 3363 5.153950 AGTTCAACATAGGTCCTCAACTC 57.846 43.478 0.00 0.00 0.00 3.01
2743 3364 4.841246 AGTTCAACATAGGTCCTCAACTCT 59.159 41.667 0.00 0.00 0.00 3.24
2744 3365 5.046950 AGTTCAACATAGGTCCTCAACTCTC 60.047 44.000 0.00 0.00 0.00 3.20
2745 3366 4.416516 TCAACATAGGTCCTCAACTCTCA 58.583 43.478 0.00 0.00 0.00 3.27
2746 3367 4.838423 TCAACATAGGTCCTCAACTCTCAA 59.162 41.667 0.00 0.00 0.00 3.02
2747 3368 4.810191 ACATAGGTCCTCAACTCTCAAC 57.190 45.455 0.00 0.00 0.00 3.18
2748 3369 4.160329 ACATAGGTCCTCAACTCTCAACA 58.840 43.478 0.00 0.00 0.00 3.33
2749 3370 4.780021 ACATAGGTCCTCAACTCTCAACAT 59.220 41.667 0.00 0.00 0.00 2.71
2750 3371 3.692257 AGGTCCTCAACTCTCAACATG 57.308 47.619 0.00 0.00 0.00 3.21
2751 3372 3.242867 AGGTCCTCAACTCTCAACATGA 58.757 45.455 0.00 0.00 0.00 3.07
2752 3373 3.648067 AGGTCCTCAACTCTCAACATGAA 59.352 43.478 0.00 0.00 0.00 2.57
2753 3374 4.288105 AGGTCCTCAACTCTCAACATGAAT 59.712 41.667 0.00 0.00 0.00 2.57
2754 3375 4.394300 GGTCCTCAACTCTCAACATGAATG 59.606 45.833 0.00 0.00 0.00 2.67
2755 3376 5.240891 GTCCTCAACTCTCAACATGAATGA 58.759 41.667 0.00 2.56 0.00 2.57
2756 3377 5.702670 GTCCTCAACTCTCAACATGAATGAA 59.297 40.000 0.00 0.00 0.00 2.57
2757 3378 5.936372 TCCTCAACTCTCAACATGAATGAAG 59.064 40.000 0.00 6.77 0.00 3.02
2758 3379 5.391736 CCTCAACTCTCAACATGAATGAAGC 60.392 44.000 0.00 0.00 0.00 3.86
2759 3380 5.065235 TCAACTCTCAACATGAATGAAGCA 58.935 37.500 0.00 0.00 0.00 3.91
2760 3381 5.532032 TCAACTCTCAACATGAATGAAGCAA 59.468 36.000 0.00 0.00 0.00 3.91
2761 3382 6.039605 TCAACTCTCAACATGAATGAAGCAAA 59.960 34.615 0.00 0.00 0.00 3.68
2762 3383 6.395426 ACTCTCAACATGAATGAAGCAAAA 57.605 33.333 0.00 0.00 0.00 2.44
2763 3384 6.808829 ACTCTCAACATGAATGAAGCAAAAA 58.191 32.000 0.00 0.00 0.00 1.94
2788 3409 5.947228 CTCACAAAGAGCATGAAGGTAAA 57.053 39.130 0.00 0.00 37.59 2.01
2789 3410 6.317789 CTCACAAAGAGCATGAAGGTAAAA 57.682 37.500 0.00 0.00 37.59 1.52
2790 3411 6.707440 TCACAAAGAGCATGAAGGTAAAAA 57.293 33.333 0.00 0.00 0.00 1.94
2791 3412 7.288810 TCACAAAGAGCATGAAGGTAAAAAT 57.711 32.000 0.00 0.00 0.00 1.82
2792 3413 8.402798 TCACAAAGAGCATGAAGGTAAAAATA 57.597 30.769 0.00 0.00 0.00 1.40
2793 3414 8.855110 TCACAAAGAGCATGAAGGTAAAAATAA 58.145 29.630 0.00 0.00 0.00 1.40
2794 3415 9.474920 CACAAAGAGCATGAAGGTAAAAATAAA 57.525 29.630 0.00 0.00 0.00 1.40
2795 3416 9.696917 ACAAAGAGCATGAAGGTAAAAATAAAG 57.303 29.630 0.00 0.00 0.00 1.85
2796 3417 9.696917 CAAAGAGCATGAAGGTAAAAATAAAGT 57.303 29.630 0.00 0.00 0.00 2.66
2797 3418 9.914131 AAAGAGCATGAAGGTAAAAATAAAGTC 57.086 29.630 0.00 0.00 0.00 3.01
2798 3419 8.635765 AGAGCATGAAGGTAAAAATAAAGTCA 57.364 30.769 0.00 0.00 0.00 3.41
2799 3420 8.515414 AGAGCATGAAGGTAAAAATAAAGTCAC 58.485 33.333 0.00 0.00 0.00 3.67
2800 3421 8.177119 AGCATGAAGGTAAAAATAAAGTCACA 57.823 30.769 0.00 0.00 0.00 3.58
2801 3422 8.637986 AGCATGAAGGTAAAAATAAAGTCACAA 58.362 29.630 0.00 0.00 0.00 3.33
2802 3423 8.699749 GCATGAAGGTAAAAATAAAGTCACAAC 58.300 33.333 0.00 0.00 0.00 3.32
2803 3424 9.191995 CATGAAGGTAAAAATAAAGTCACAACC 57.808 33.333 0.00 0.00 0.00 3.77
2804 3425 7.419204 TGAAGGTAAAAATAAAGTCACAACCG 58.581 34.615 0.00 0.00 0.00 4.44
2805 3426 6.321848 AGGTAAAAATAAAGTCACAACCGG 57.678 37.500 0.00 0.00 0.00 5.28
2806 3427 4.919168 GGTAAAAATAAAGTCACAACCGGC 59.081 41.667 0.00 0.00 0.00 6.13
2807 3428 4.929819 AAAAATAAAGTCACAACCGGCT 57.070 36.364 0.00 0.00 0.00 5.52
2808 3429 3.915437 AAATAAAGTCACAACCGGCTG 57.085 42.857 0.00 0.62 0.00 4.85
2809 3430 1.821216 ATAAAGTCACAACCGGCTGG 58.179 50.000 11.02 11.02 42.84 4.85
2810 3431 0.887387 TAAAGTCACAACCGGCTGGC 60.887 55.000 12.89 0.00 39.70 4.85
2811 3432 4.643387 AGTCACAACCGGCTGGCC 62.643 66.667 12.89 0.00 39.70 5.36
2812 3433 4.947147 GTCACAACCGGCTGGCCA 62.947 66.667 12.89 4.71 39.70 5.36
2813 3434 4.196778 TCACAACCGGCTGGCCAA 62.197 61.111 12.89 0.00 39.70 4.52
2814 3435 3.222855 CACAACCGGCTGGCCAAA 61.223 61.111 12.89 0.00 39.70 3.28
2815 3436 2.443016 ACAACCGGCTGGCCAAAA 60.443 55.556 12.89 0.00 39.70 2.44
2816 3437 2.339712 CAACCGGCTGGCCAAAAG 59.660 61.111 12.89 0.00 39.70 2.27
2817 3438 2.197324 AACCGGCTGGCCAAAAGA 59.803 55.556 12.89 0.00 39.70 2.52
2818 3439 1.456705 AACCGGCTGGCCAAAAGAA 60.457 52.632 12.89 0.00 39.70 2.52
2819 3440 1.045911 AACCGGCTGGCCAAAAGAAA 61.046 50.000 12.89 0.00 39.70 2.52
2820 3441 1.290009 CCGGCTGGCCAAAAGAAAG 59.710 57.895 7.01 0.00 35.37 2.62
2821 3442 1.178534 CCGGCTGGCCAAAAGAAAGA 61.179 55.000 7.01 0.00 35.37 2.52
2822 3443 0.890683 CGGCTGGCCAAAAGAAAGAT 59.109 50.000 7.01 0.00 35.37 2.40
2823 3444 2.091541 CGGCTGGCCAAAAGAAAGATA 58.908 47.619 7.01 0.00 35.37 1.98
2824 3445 2.098117 CGGCTGGCCAAAAGAAAGATAG 59.902 50.000 7.01 0.00 35.37 2.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.374743 ACAATTCAATAAACCAAAATAGCCAGT 58.625 29.630 0.00 0.00 0.00 4.00
1 2 8.776376 ACAATTCAATAAACCAAAATAGCCAG 57.224 30.769 0.00 0.00 0.00 4.85
49 50 9.883142 TTTGGAGTGTTGATTTTGTTTTCTTAT 57.117 25.926 0.00 0.00 0.00 1.73
50 51 9.712305 TTTTGGAGTGTTGATTTTGTTTTCTTA 57.288 25.926 0.00 0.00 0.00 2.10
51 52 8.614469 TTTTGGAGTGTTGATTTTGTTTTCTT 57.386 26.923 0.00 0.00 0.00 2.52
52 53 8.667463 CATTTTGGAGTGTTGATTTTGTTTTCT 58.333 29.630 0.00 0.00 0.00 2.52
53 54 7.429051 GCATTTTGGAGTGTTGATTTTGTTTTC 59.571 33.333 0.00 0.00 0.00 2.29
54 55 7.121020 AGCATTTTGGAGTGTTGATTTTGTTTT 59.879 29.630 0.00 0.00 0.00 2.43
55 56 6.598850 AGCATTTTGGAGTGTTGATTTTGTTT 59.401 30.769 0.00 0.00 0.00 2.83
56 57 6.114767 AGCATTTTGGAGTGTTGATTTTGTT 58.885 32.000 0.00 0.00 0.00 2.83
57 58 5.673514 AGCATTTTGGAGTGTTGATTTTGT 58.326 33.333 0.00 0.00 0.00 2.83
58 59 6.607735 AAGCATTTTGGAGTGTTGATTTTG 57.392 33.333 0.00 0.00 0.00 2.44
75 76 6.702282 CCAAAAATGCCATTTTCAAAAGCATT 59.298 30.769 15.31 13.82 45.67 3.56
76 77 6.040616 TCCAAAAATGCCATTTTCAAAAGCAT 59.959 30.769 15.31 4.20 41.30 3.79
77 78 5.359009 TCCAAAAATGCCATTTTCAAAAGCA 59.641 32.000 15.31 0.00 41.30 3.91
78 79 5.829829 TCCAAAAATGCCATTTTCAAAAGC 58.170 33.333 15.31 0.00 41.30 3.51
79 80 5.916320 GCTCCAAAAATGCCATTTTCAAAAG 59.084 36.000 15.31 11.38 41.30 2.27
80 81 5.505324 CGCTCCAAAAATGCCATTTTCAAAA 60.505 36.000 15.31 2.38 41.30 2.44
81 82 4.024218 CGCTCCAAAAATGCCATTTTCAAA 60.024 37.500 15.31 3.94 41.30 2.69
82 83 3.497640 CGCTCCAAAAATGCCATTTTCAA 59.502 39.130 15.31 4.25 41.30 2.69
83 84 3.065655 CGCTCCAAAAATGCCATTTTCA 58.934 40.909 15.31 3.07 41.30 2.69
84 85 3.066380 ACGCTCCAAAAATGCCATTTTC 58.934 40.909 15.31 2.68 41.30 2.29
85 86 3.066380 GACGCTCCAAAAATGCCATTTT 58.934 40.909 9.57 9.57 43.83 1.82
86 87 2.687370 GACGCTCCAAAAATGCCATTT 58.313 42.857 0.00 0.00 0.00 2.32
87 88 1.402720 CGACGCTCCAAAAATGCCATT 60.403 47.619 0.00 0.00 0.00 3.16
88 89 0.171007 CGACGCTCCAAAAATGCCAT 59.829 50.000 0.00 0.00 0.00 4.40
89 90 0.886938 TCGACGCTCCAAAAATGCCA 60.887 50.000 0.00 0.00 0.00 4.92
90 91 0.451783 ATCGACGCTCCAAAAATGCC 59.548 50.000 0.00 0.00 0.00 4.40
91 92 2.262572 AATCGACGCTCCAAAAATGC 57.737 45.000 0.00 0.00 0.00 3.56
111 112 4.257731 GGAAGTGGTGGCAAAAAGAAAAA 58.742 39.130 0.00 0.00 0.00 1.94
112 113 3.261897 TGGAAGTGGTGGCAAAAAGAAAA 59.738 39.130 0.00 0.00 0.00 2.29
113 114 2.834549 TGGAAGTGGTGGCAAAAAGAAA 59.165 40.909 0.00 0.00 0.00 2.52
114 115 2.167487 GTGGAAGTGGTGGCAAAAAGAA 59.833 45.455 0.00 0.00 0.00 2.52
115 116 1.754226 GTGGAAGTGGTGGCAAAAAGA 59.246 47.619 0.00 0.00 0.00 2.52
116 117 1.480137 TGTGGAAGTGGTGGCAAAAAG 59.520 47.619 0.00 0.00 0.00 2.27
117 118 1.561643 TGTGGAAGTGGTGGCAAAAA 58.438 45.000 0.00 0.00 0.00 1.94
118 119 1.561643 TTGTGGAAGTGGTGGCAAAA 58.438 45.000 0.00 0.00 0.00 2.44
119 120 1.561643 TTTGTGGAAGTGGTGGCAAA 58.438 45.000 0.00 0.00 0.00 3.68
120 121 1.786937 ATTTGTGGAAGTGGTGGCAA 58.213 45.000 0.00 0.00 0.00 4.52
121 122 2.666272 TATTTGTGGAAGTGGTGGCA 57.334 45.000 0.00 0.00 0.00 4.92
122 123 3.088532 TCATATTTGTGGAAGTGGTGGC 58.911 45.455 0.00 0.00 0.00 5.01
123 124 5.920193 AATCATATTTGTGGAAGTGGTGG 57.080 39.130 0.00 0.00 0.00 4.61
124 125 7.161773 AGAAATCATATTTGTGGAAGTGGTG 57.838 36.000 0.00 0.00 0.00 4.17
125 126 7.451255 TCAAGAAATCATATTTGTGGAAGTGGT 59.549 33.333 0.00 0.00 0.00 4.16
126 127 7.829725 TCAAGAAATCATATTTGTGGAAGTGG 58.170 34.615 0.00 0.00 0.00 4.00
127 128 9.297586 CATCAAGAAATCATATTTGTGGAAGTG 57.702 33.333 0.00 0.00 0.00 3.16
128 129 9.246670 TCATCAAGAAATCATATTTGTGGAAGT 57.753 29.630 0.00 0.00 0.00 3.01
145 146 4.751098 GTGCTTGCCAAATTTCATCAAGAA 59.249 37.500 19.60 11.52 37.03 2.52
146 147 4.202233 TGTGCTTGCCAAATTTCATCAAGA 60.202 37.500 19.60 8.46 37.03 3.02
147 148 4.059511 TGTGCTTGCCAAATTTCATCAAG 58.940 39.130 14.51 14.51 37.70 3.02
148 149 3.808726 GTGTGCTTGCCAAATTTCATCAA 59.191 39.130 0.00 0.00 0.00 2.57
149 150 3.181468 TGTGTGCTTGCCAAATTTCATCA 60.181 39.130 0.00 0.00 0.00 3.07
150 151 3.391965 TGTGTGCTTGCCAAATTTCATC 58.608 40.909 0.00 0.00 0.00 2.92
151 152 3.069872 TCTGTGTGCTTGCCAAATTTCAT 59.930 39.130 0.00 0.00 0.00 2.57
152 153 2.429971 TCTGTGTGCTTGCCAAATTTCA 59.570 40.909 0.00 0.00 0.00 2.69
153 154 3.096489 TCTGTGTGCTTGCCAAATTTC 57.904 42.857 0.00 0.00 0.00 2.17
154 155 3.540314 TTCTGTGTGCTTGCCAAATTT 57.460 38.095 0.00 0.00 0.00 1.82
155 156 3.540314 TTTCTGTGTGCTTGCCAAATT 57.460 38.095 0.00 0.00 0.00 1.82
156 157 3.118665 ACTTTTCTGTGTGCTTGCCAAAT 60.119 39.130 0.00 0.00 0.00 2.32
157 158 2.233431 ACTTTTCTGTGTGCTTGCCAAA 59.767 40.909 0.00 0.00 0.00 3.28
158 159 1.824230 ACTTTTCTGTGTGCTTGCCAA 59.176 42.857 0.00 0.00 0.00 4.52
159 160 1.473258 ACTTTTCTGTGTGCTTGCCA 58.527 45.000 0.00 0.00 0.00 4.92
160 161 2.195922 CAACTTTTCTGTGTGCTTGCC 58.804 47.619 0.00 0.00 0.00 4.52
161 162 1.589779 GCAACTTTTCTGTGTGCTTGC 59.410 47.619 0.00 0.00 0.00 4.01
162 163 2.195922 GGCAACTTTTCTGTGTGCTTG 58.804 47.619 0.00 0.00 0.00 4.01
163 164 1.824230 TGGCAACTTTTCTGTGTGCTT 59.176 42.857 0.00 0.00 37.61 3.91
164 165 1.473258 TGGCAACTTTTCTGTGTGCT 58.527 45.000 0.00 0.00 37.61 4.40
165 166 2.292103 TTGGCAACTTTTCTGTGTGC 57.708 45.000 0.00 0.00 37.61 4.57
166 167 3.784338 ACATTGGCAACTTTTCTGTGTG 58.216 40.909 0.00 0.00 37.61 3.82
167 168 4.470334 AACATTGGCAACTTTTCTGTGT 57.530 36.364 0.00 0.00 37.61 3.72
168 169 4.026640 CGAAACATTGGCAACTTTTCTGTG 60.027 41.667 22.95 11.13 37.61 3.66
169 170 4.111916 CGAAACATTGGCAACTTTTCTGT 58.888 39.130 22.95 12.81 37.61 3.41
170 171 3.060339 GCGAAACATTGGCAACTTTTCTG 60.060 43.478 22.95 18.79 34.26 3.02
171 172 3.123050 GCGAAACATTGGCAACTTTTCT 58.877 40.909 22.95 0.00 34.26 2.52
172 173 2.863137 TGCGAAACATTGGCAACTTTTC 59.137 40.909 18.77 18.77 41.49 2.29
173 174 2.607180 GTGCGAAACATTGGCAACTTTT 59.393 40.909 0.00 4.72 45.88 2.27
174 175 2.200899 GTGCGAAACATTGGCAACTTT 58.799 42.857 0.00 3.01 45.88 2.66
175 176 1.135915 TGTGCGAAACATTGGCAACTT 59.864 42.857 0.00 0.00 45.88 2.66
176 177 0.743688 TGTGCGAAACATTGGCAACT 59.256 45.000 0.00 0.00 45.88 3.16
177 178 1.565305 TTGTGCGAAACATTGGCAAC 58.435 45.000 0.00 0.00 45.88 4.17
178 179 1.929836 GTTTGTGCGAAACATTGGCAA 59.070 42.857 0.68 0.68 45.88 4.52
179 180 1.134995 TGTTTGTGCGAAACATTGGCA 60.135 42.857 9.21 0.00 42.21 4.92
180 181 1.565305 TGTTTGTGCGAAACATTGGC 58.435 45.000 9.21 0.00 38.99 4.52
181 182 4.590400 TTTTGTTTGTGCGAAACATTGG 57.410 36.364 13.01 0.00 39.56 3.16
182 183 6.246449 TGAATTTTGTTTGTGCGAAACATTG 58.754 32.000 13.01 0.00 39.56 2.82
183 184 6.312426 TCTGAATTTTGTTTGTGCGAAACATT 59.688 30.769 13.01 6.48 39.56 2.71
184 185 5.809562 TCTGAATTTTGTTTGTGCGAAACAT 59.190 32.000 13.01 0.97 39.56 2.71
185 186 5.164233 TCTGAATTTTGTTTGTGCGAAACA 58.836 33.333 9.21 9.21 38.26 2.83
186 187 5.694674 TCTGAATTTTGTTTGTGCGAAAC 57.305 34.783 4.58 4.58 0.00 2.78
187 188 6.900568 ATTCTGAATTTTGTTTGTGCGAAA 57.099 29.167 0.00 0.00 0.00 3.46
188 189 6.900568 AATTCTGAATTTTGTTTGTGCGAA 57.099 29.167 9.76 0.00 0.00 4.70
189 190 8.586570 AATAATTCTGAATTTTGTTTGTGCGA 57.413 26.923 19.68 0.00 32.38 5.10
190 191 9.094459 CAAATAATTCTGAATTTTGTTTGTGCG 57.906 29.630 19.68 5.46 32.38 5.34
231 232 8.617809 GCCCGTATGAAGAGTAAAATCATAAAA 58.382 33.333 0.00 0.00 37.68 1.52
232 233 7.990886 AGCCCGTATGAAGAGTAAAATCATAAA 59.009 33.333 0.00 0.00 37.68 1.40
233 234 7.506114 AGCCCGTATGAAGAGTAAAATCATAA 58.494 34.615 0.00 0.00 37.68 1.90
234 235 7.062749 AGCCCGTATGAAGAGTAAAATCATA 57.937 36.000 0.00 0.00 35.53 2.15
235 236 5.930135 AGCCCGTATGAAGAGTAAAATCAT 58.070 37.500 0.00 0.00 37.54 2.45
236 237 5.105106 TGAGCCCGTATGAAGAGTAAAATCA 60.105 40.000 0.00 0.00 0.00 2.57
237 238 5.357257 TGAGCCCGTATGAAGAGTAAAATC 58.643 41.667 0.00 0.00 0.00 2.17
238 239 5.353394 TGAGCCCGTATGAAGAGTAAAAT 57.647 39.130 0.00 0.00 0.00 1.82
239 240 4.811969 TGAGCCCGTATGAAGAGTAAAA 57.188 40.909 0.00 0.00 0.00 1.52
240 241 5.353394 AATGAGCCCGTATGAAGAGTAAA 57.647 39.130 0.00 0.00 0.00 2.01
241 242 5.105106 TCAAATGAGCCCGTATGAAGAGTAA 60.105 40.000 0.00 0.00 0.00 2.24
242 243 4.404394 TCAAATGAGCCCGTATGAAGAGTA 59.596 41.667 0.00 0.00 0.00 2.59
243 244 3.197766 TCAAATGAGCCCGTATGAAGAGT 59.802 43.478 0.00 0.00 0.00 3.24
244 245 3.797039 TCAAATGAGCCCGTATGAAGAG 58.203 45.455 0.00 0.00 0.00 2.85
245 246 3.797039 CTCAAATGAGCCCGTATGAAGA 58.203 45.455 0.00 0.00 35.13 2.87
269 270 3.447229 TGGACGCAACTATTCTCAGATCA 59.553 43.478 0.00 0.00 0.00 2.92
272 273 5.791336 ATATGGACGCAACTATTCTCAGA 57.209 39.130 0.00 0.00 0.00 3.27
283 284 3.213506 AGCTAATGCAATATGGACGCAA 58.786 40.909 0.00 0.00 42.74 4.85
285 286 5.106555 ACAATAGCTAATGCAATATGGACGC 60.107 40.000 8.77 0.00 42.74 5.19
368 374 5.042463 TGAGGAGTACCATTGACACAAAA 57.958 39.130 0.00 0.00 38.94 2.44
436 443 5.070446 TCTCTGTGACCTGCTTTAGAAGAAA 59.930 40.000 0.00 0.00 0.00 2.52
448 455 1.405256 GCACCTGATCTCTGTGACCTG 60.405 57.143 12.14 0.00 0.00 4.00
450 457 0.610174 TGCACCTGATCTCTGTGACC 59.390 55.000 12.14 0.00 0.00 4.02
554 716 5.736951 ATATGCTAGGAGAAATTCTCGCT 57.263 39.130 15.88 15.36 44.28 4.93
584 746 6.073222 CCAGAGCATTTACCGGATATTAACAC 60.073 42.308 9.46 0.00 0.00 3.32
585 747 5.995282 CCAGAGCATTTACCGGATATTAACA 59.005 40.000 9.46 0.00 0.00 2.41
748 935 7.037586 TGTGGGAGAGGAAAGACAAATAGTATT 60.038 37.037 0.00 0.00 31.85 1.89
757 944 1.971357 GTCTGTGGGAGAGGAAAGACA 59.029 52.381 0.00 0.00 35.29 3.41
798 985 0.034960 CACGAGACCTCCCTCTCAGA 60.035 60.000 0.00 0.00 37.16 3.27
815 1012 1.032014 TCCAAGGCAAAGCAAGACAC 58.968 50.000 0.00 0.00 0.00 3.67
833 1030 1.204312 GACGACGGTGCTTGCTTTC 59.796 57.895 0.00 0.00 0.00 2.62
834 1031 2.594962 CGACGACGGTGCTTGCTTT 61.595 57.895 0.00 0.00 35.72 3.51
895 1092 6.171921 AGAAGACAGACAAAGAATCCATGAG 58.828 40.000 0.00 0.00 0.00 2.90
913 1110 3.406764 AGAGCAAACACATGGAGAAGAC 58.593 45.455 0.00 0.00 0.00 3.01
953 1150 1.507141 GCCGTGGAGTTGTTGGACAG 61.507 60.000 0.00 0.00 0.00 3.51
956 1153 0.534203 GAAGCCGTGGAGTTGTTGGA 60.534 55.000 0.00 0.00 0.00 3.53
958 1155 1.569493 CGAAGCCGTGGAGTTGTTG 59.431 57.895 0.00 0.00 0.00 3.33
997 1194 0.605319 TCAAGCCGCTCGGACATTTT 60.605 50.000 13.11 0.00 37.50 1.82
998 1195 0.392998 ATCAAGCCGCTCGGACATTT 60.393 50.000 13.11 0.00 37.50 2.32
1005 1202 1.220169 CCTCATCATCAAGCCGCTCG 61.220 60.000 0.00 0.00 0.00 5.03
1010 1207 2.372264 TGCTTTCCTCATCATCAAGCC 58.628 47.619 0.00 0.00 39.33 4.35
1104 1301 3.391665 CTCGCGGGAGGCAAGGAAT 62.392 63.158 21.06 0.00 43.84 3.01
1156 1353 2.671682 GGACTTCCAGAGGGTGCC 59.328 66.667 0.00 0.00 35.64 5.01
1218 1415 0.385390 CAAACGTGCTGGAGCCTTTT 59.615 50.000 0.00 0.00 41.18 2.27
1260 1457 1.918293 ATTCAGAGGCACCGGGTCA 60.918 57.895 6.32 0.00 0.00 4.02
1344 1541 2.525124 ATGCTGGACCCACGGTTCA 61.525 57.895 0.00 0.00 39.18 3.18
1365 1562 1.133253 CCAAGCTTGACATGACGCG 59.867 57.895 28.05 3.53 0.00 6.01
1367 1564 1.503542 GCCCAAGCTTGACATGACG 59.496 57.895 28.05 8.76 35.50 4.35
1371 1568 2.034687 AGCGCCCAAGCTTGACAT 59.965 55.556 28.05 7.99 46.80 3.06
1381 1578 1.337118 AAGGAAATTTGAAGCGCCCA 58.663 45.000 2.29 0.00 0.00 5.36
1391 1588 3.667360 GCATGGCAGACAAAGGAAATTT 58.333 40.909 0.00 0.00 0.00 1.82
1395 1592 1.243342 CCGCATGGCAGACAAAGGAA 61.243 55.000 0.00 0.00 0.00 3.36
1475 1672 1.832167 AGATCCAGAGAGCCTCCGC 60.832 63.158 0.00 0.00 0.00 5.54
1492 1689 3.108289 CACACGGCAGCTCGACAG 61.108 66.667 9.87 3.04 0.00 3.51
1505 1702 3.944055 TCTTCAACTCCTCTAGCACAC 57.056 47.619 0.00 0.00 0.00 3.82
1714 1911 4.567159 GTCGATCTCTTCAGGCGTAAAAAT 59.433 41.667 0.00 0.00 0.00 1.82
1717 1914 2.477357 CGTCGATCTCTTCAGGCGTAAA 60.477 50.000 0.00 0.00 0.00 2.01
1816 2013 7.132694 TCATTCTGACAACACATTACATGAC 57.867 36.000 0.00 0.00 0.00 3.06
1817 2014 7.926674 ATCATTCTGACAACACATTACATGA 57.073 32.000 0.00 0.00 0.00 3.07
1868 2065 6.877322 AGTACCGGCATACATAATGTAATTCC 59.123 38.462 0.00 0.00 36.31 3.01
1906 2465 6.061441 TCAACCATACATGTTTCAAGTGACT 58.939 36.000 2.30 0.00 0.00 3.41
1907 2466 6.204688 TCTCAACCATACATGTTTCAAGTGAC 59.795 38.462 2.30 0.00 0.00 3.67
1908 2467 6.295249 TCTCAACCATACATGTTTCAAGTGA 58.705 36.000 2.30 0.80 0.00 3.41
1909 2468 6.558771 TCTCAACCATACATGTTTCAAGTG 57.441 37.500 2.30 0.00 0.00 3.16
2006 2575 7.775053 AATATAAACTGGGCAAAGTGAAGAA 57.225 32.000 0.00 0.00 0.00 2.52
2037 2606 9.336171 ACAACATTTTAAACTTGCCAAACATAT 57.664 25.926 0.00 0.00 0.00 1.78
2045 2614 5.293079 TGAGCAACAACATTTTAAACTTGCC 59.707 36.000 0.00 0.00 34.39 4.52
2053 2622 7.651304 CACCAGTTATTGAGCAACAACATTTTA 59.349 33.333 7.07 0.00 41.52 1.52
2058 2627 3.951037 ACACCAGTTATTGAGCAACAACA 59.049 39.130 7.07 0.00 41.52 3.33
2072 2642 0.036164 TCATTAGCCGCACACCAGTT 59.964 50.000 0.00 0.00 0.00 3.16
2082 2652 0.876342 GCCCTCGAAGTCATTAGCCG 60.876 60.000 0.00 0.00 0.00 5.52
2103 2673 0.454957 CGAATGTTCCGCCAGCTTTG 60.455 55.000 0.00 0.00 0.00 2.77
2104 2674 0.889186 ACGAATGTTCCGCCAGCTTT 60.889 50.000 0.00 0.00 0.00 3.51
2105 2675 1.302511 ACGAATGTTCCGCCAGCTT 60.303 52.632 0.00 0.00 0.00 3.74
2106 2676 2.034879 CACGAATGTTCCGCCAGCT 61.035 57.895 0.00 0.00 0.00 4.24
2107 2677 2.480555 CACGAATGTTCCGCCAGC 59.519 61.111 0.00 0.00 0.00 4.85
2109 2679 1.599518 AAGCACGAATGTTCCGCCA 60.600 52.632 0.00 0.00 0.00 5.69
2111 2681 0.452784 GACAAGCACGAATGTTCCGC 60.453 55.000 0.00 0.00 0.00 5.54
2112 2682 0.865111 TGACAAGCACGAATGTTCCG 59.135 50.000 0.00 0.00 0.00 4.30
2113 2683 2.921126 CTTGACAAGCACGAATGTTCC 58.079 47.619 1.43 0.00 0.00 3.62
2125 2695 0.381801 AACAACGGCAGCTTGACAAG 59.618 50.000 11.02 11.02 0.00 3.16
2126 2696 0.100325 CAACAACGGCAGCTTGACAA 59.900 50.000 1.51 0.00 0.00 3.18
2127 2697 1.723608 CCAACAACGGCAGCTTGACA 61.724 55.000 1.51 0.00 0.00 3.58
2128 2698 1.008538 CCAACAACGGCAGCTTGAC 60.009 57.895 1.51 0.00 0.00 3.18
2129 2699 3.431055 CCAACAACGGCAGCTTGA 58.569 55.556 1.51 0.00 0.00 3.02
2137 2707 2.820330 AGACAAAAATGCCAACAACGG 58.180 42.857 0.00 0.00 0.00 4.44
2138 2708 4.111916 AGAAGACAAAAATGCCAACAACG 58.888 39.130 0.00 0.00 0.00 4.10
2139 2709 6.421377 AAAGAAGACAAAAATGCCAACAAC 57.579 33.333 0.00 0.00 0.00 3.32
2140 2710 7.446001 AAAAAGAAGACAAAAATGCCAACAA 57.554 28.000 0.00 0.00 0.00 2.83
2161 2731 2.737039 GCACAACAAGCCCGAAGAAAAA 60.737 45.455 0.00 0.00 0.00 1.94
2162 2732 1.202359 GCACAACAAGCCCGAAGAAAA 60.202 47.619 0.00 0.00 0.00 2.29
2163 2733 0.383949 GCACAACAAGCCCGAAGAAA 59.616 50.000 0.00 0.00 0.00 2.52
2164 2734 1.452145 GGCACAACAAGCCCGAAGAA 61.452 55.000 0.00 0.00 46.50 2.52
2165 2735 1.896660 GGCACAACAAGCCCGAAGA 60.897 57.895 0.00 0.00 46.50 2.87
2166 2736 2.644992 GGCACAACAAGCCCGAAG 59.355 61.111 0.00 0.00 46.50 3.79
2172 2742 2.725815 GCGAACGGCACAACAAGC 60.726 61.111 0.00 0.00 42.87 4.01
2173 2743 2.051345 GGCGAACGGCACAACAAG 60.051 61.111 15.29 0.00 46.16 3.16
2183 2753 4.745751 TAACTGCCGGGGCGAACG 62.746 66.667 2.18 0.00 45.51 3.95
2184 2754 3.122971 GTAACTGCCGGGGCGAAC 61.123 66.667 2.18 0.00 45.51 3.95
2185 2755 4.397832 GGTAACTGCCGGGGCGAA 62.398 66.667 2.18 0.00 45.51 4.70
2195 2765 5.894673 CGAACACCGATCACAAGGTAACTG 61.895 50.000 0.00 0.00 45.27 3.16
2197 2767 2.410730 CGAACACCGATCACAAGGTAAC 59.589 50.000 0.00 0.00 39.00 2.50
2198 2768 2.036217 ACGAACACCGATCACAAGGTAA 59.964 45.455 0.00 0.00 39.00 2.85
2199 2769 1.614903 ACGAACACCGATCACAAGGTA 59.385 47.619 0.00 0.00 39.00 3.08
2200 2770 0.391597 ACGAACACCGATCACAAGGT 59.608 50.000 0.00 0.00 42.34 3.50
2201 2771 0.790207 CACGAACACCGATCACAAGG 59.210 55.000 0.00 0.00 41.76 3.61
2202 2772 0.163788 GCACGAACACCGATCACAAG 59.836 55.000 0.00 0.00 41.76 3.16
2203 2773 0.249699 AGCACGAACACCGATCACAA 60.250 50.000 0.00 0.00 41.76 3.33
2204 2774 0.249699 AAGCACGAACACCGATCACA 60.250 50.000 0.00 0.00 41.76 3.58
2205 2775 0.865769 AAAGCACGAACACCGATCAC 59.134 50.000 0.00 0.00 41.76 3.06
2206 2776 2.442212 TAAAGCACGAACACCGATCA 57.558 45.000 0.00 0.00 41.76 2.92
2207 2777 5.652744 ATTATAAAGCACGAACACCGATC 57.347 39.130 0.00 0.00 41.76 3.69
2208 2778 8.821147 TTATATTATAAAGCACGAACACCGAT 57.179 30.769 0.00 0.00 41.76 4.18
2209 2779 8.645730 TTTATATTATAAAGCACGAACACCGA 57.354 30.769 5.01 0.00 41.76 4.69
2210 2780 8.545420 ACTTTATATTATAAAGCACGAACACCG 58.455 33.333 25.76 8.29 39.71 4.94
2211 2781 9.646336 CACTTTATATTATAAAGCACGAACACC 57.354 33.333 25.76 0.00 37.89 4.16
2212 2782 9.646336 CCACTTTATATTATAAAGCACGAACAC 57.354 33.333 25.76 0.00 37.89 3.32
2213 2783 8.832521 CCCACTTTATATTATAAAGCACGAACA 58.167 33.333 25.76 0.00 37.89 3.18
2214 2784 8.287503 CCCCACTTTATATTATAAAGCACGAAC 58.712 37.037 25.76 0.00 37.89 3.95
2215 2785 8.212312 TCCCCACTTTATATTATAAAGCACGAA 58.788 33.333 25.76 12.97 37.89 3.85
2216 2786 7.737869 TCCCCACTTTATATTATAAAGCACGA 58.262 34.615 25.76 17.07 37.89 4.35
2217 2787 7.972832 TCCCCACTTTATATTATAAAGCACG 57.027 36.000 25.76 17.85 37.89 5.34
2220 2790 9.976511 GGTTTTCCCCACTTTATATTATAAAGC 57.023 33.333 25.76 12.65 37.89 3.51
2239 2809 5.349061 TCCTAGACGAAATAGGGTTTTCC 57.651 43.478 10.85 0.00 40.30 3.13
2240 2810 7.011202 GTGAATCCTAGACGAAATAGGGTTTTC 59.989 40.741 10.65 11.20 42.58 2.29
2241 2811 6.822170 GTGAATCCTAGACGAAATAGGGTTTT 59.178 38.462 10.65 4.95 42.58 2.43
2242 2812 6.346896 GTGAATCCTAGACGAAATAGGGTTT 58.653 40.000 10.65 6.69 42.58 3.27
2243 2813 5.163332 GGTGAATCCTAGACGAAATAGGGTT 60.163 44.000 9.56 9.56 44.70 4.11
2244 2814 4.344390 GGTGAATCCTAGACGAAATAGGGT 59.656 45.833 10.85 3.27 40.30 4.34
2245 2815 4.344102 TGGTGAATCCTAGACGAAATAGGG 59.656 45.833 10.85 0.00 40.30 3.53
2246 2816 5.531122 TGGTGAATCCTAGACGAAATAGG 57.469 43.478 0.00 0.00 41.11 2.57
2247 2817 7.928706 AGAATTGGTGAATCCTAGACGAAATAG 59.071 37.037 0.00 0.00 37.07 1.73
2248 2818 7.792032 AGAATTGGTGAATCCTAGACGAAATA 58.208 34.615 0.00 0.00 37.07 1.40
2249 2819 6.653989 AGAATTGGTGAATCCTAGACGAAAT 58.346 36.000 0.00 0.00 37.07 2.17
2250 2820 6.049955 AGAATTGGTGAATCCTAGACGAAA 57.950 37.500 0.00 0.00 37.07 3.46
2251 2821 5.677319 AGAATTGGTGAATCCTAGACGAA 57.323 39.130 0.00 0.00 37.07 3.85
2252 2822 6.127101 TCTAGAATTGGTGAATCCTAGACGA 58.873 40.000 0.00 0.00 37.07 4.20
2253 2823 6.392625 TCTAGAATTGGTGAATCCTAGACG 57.607 41.667 0.00 0.00 37.07 4.18
2254 2824 6.740122 GCCTCTAGAATTGGTGAATCCTAGAC 60.740 46.154 0.00 0.00 37.07 2.59
2255 2825 5.305644 GCCTCTAGAATTGGTGAATCCTAGA 59.694 44.000 0.00 0.00 37.07 2.43
2256 2826 5.546526 GCCTCTAGAATTGGTGAATCCTAG 58.453 45.833 0.00 0.00 37.07 3.02
2257 2827 4.039245 CGCCTCTAGAATTGGTGAATCCTA 59.961 45.833 4.43 0.00 37.07 2.94
2258 2828 3.181461 CGCCTCTAGAATTGGTGAATCCT 60.181 47.826 4.43 0.00 37.07 3.24
2259 2829 3.134458 CGCCTCTAGAATTGGTGAATCC 58.866 50.000 4.43 0.00 33.56 3.01
2260 2830 2.545946 GCGCCTCTAGAATTGGTGAATC 59.454 50.000 12.90 0.00 33.56 2.52
2335 2912 2.096069 CACATGGCGACTTCAAAGACAG 60.096 50.000 0.00 0.00 0.00 3.51
2358 2940 5.460091 GCTTTGATCCTGAAGTCAACAAAAC 59.540 40.000 0.00 0.00 34.34 2.43
2376 2958 2.504367 GGCCTTGAGTTACAGCTTTGA 58.496 47.619 0.00 0.00 0.00 2.69
2377 2959 1.197721 CGGCCTTGAGTTACAGCTTTG 59.802 52.381 0.00 0.00 0.00 2.77
2414 3033 5.308825 ACAGTGATTGTTCCCTTTGAGTAG 58.691 41.667 0.00 0.00 36.31 2.57
2415 3034 5.304686 ACAGTGATTGTTCCCTTTGAGTA 57.695 39.130 0.00 0.00 36.31 2.59
2416 3035 4.170468 ACAGTGATTGTTCCCTTTGAGT 57.830 40.909 0.00 0.00 36.31 3.41
2428 3047 0.587768 TGCTGCGACAACAGTGATTG 59.412 50.000 0.00 0.32 39.96 2.67
2435 3054 1.150827 CTTGAGATGCTGCGACAACA 58.849 50.000 0.00 0.00 0.00 3.33
2444 3063 9.686683 ATACAATTTTAACTACCTTGAGATGCT 57.313 29.630 0.00 0.00 0.00 3.79
2460 3079 5.806818 TCCTTCCGGACACATACAATTTTA 58.193 37.500 1.83 0.00 33.30 1.52
2466 3085 3.773418 TTTTCCTTCCGGACACATACA 57.227 42.857 1.83 0.00 39.60 2.29
2467 3086 4.007659 ACATTTTCCTTCCGGACACATAC 58.992 43.478 1.83 0.00 39.60 2.39
2536 3155 7.344093 GGTAGGTAAGGTCACCTCTAATAAACT 59.656 40.741 0.00 0.00 46.34 2.66
2538 3157 6.322201 CGGTAGGTAAGGTCACCTCTAATAAA 59.678 42.308 0.00 0.00 46.34 1.40
2554 3173 3.455543 CTGGTTATTTCCCCGGTAGGTAA 59.544 47.826 0.00 0.00 35.12 2.85
2556 3175 1.841919 CTGGTTATTTCCCCGGTAGGT 59.158 52.381 0.00 0.00 35.12 3.08
2557 3176 1.476291 GCTGGTTATTTCCCCGGTAGG 60.476 57.143 0.00 0.00 37.24 3.18
2560 3179 0.629058 ATGCTGGTTATTTCCCCGGT 59.371 50.000 0.00 0.00 0.00 5.28
2569 3188 2.104451 CCTCTCTGCTCATGCTGGTTAT 59.896 50.000 0.00 0.00 40.48 1.89
2570 3189 1.483827 CCTCTCTGCTCATGCTGGTTA 59.516 52.381 0.00 0.00 40.48 2.85
2575 3194 1.619827 GCTATCCTCTCTGCTCATGCT 59.380 52.381 0.00 0.00 40.48 3.79
2576 3195 1.343789 TGCTATCCTCTCTGCTCATGC 59.656 52.381 0.00 0.00 40.20 4.06
2577 3196 2.629137 AGTGCTATCCTCTCTGCTCATG 59.371 50.000 0.00 0.00 0.00 3.07
2578 3197 2.629137 CAGTGCTATCCTCTCTGCTCAT 59.371 50.000 0.00 0.00 0.00 2.90
2579 3198 2.030371 CAGTGCTATCCTCTCTGCTCA 58.970 52.381 0.00 0.00 0.00 4.26
2580 3199 1.269726 GCAGTGCTATCCTCTCTGCTC 60.270 57.143 8.18 0.00 45.14 4.26
2643 3264 7.039993 CGGGGATCTTCCTCTTTTCTTTAAAAA 60.040 37.037 0.00 0.00 33.85 1.94
2644 3265 6.433093 CGGGGATCTTCCTCTTTTCTTTAAAA 59.567 38.462 0.00 0.00 33.85 1.52
2645 3266 5.944007 CGGGGATCTTCCTCTTTTCTTTAAA 59.056 40.000 0.00 0.00 33.85 1.52
2646 3267 5.497474 CGGGGATCTTCCTCTTTTCTTTAA 58.503 41.667 0.00 0.00 33.85 1.52
2647 3268 4.080526 CCGGGGATCTTCCTCTTTTCTTTA 60.081 45.833 0.00 0.00 33.85 1.85
2648 3269 3.308473 CCGGGGATCTTCCTCTTTTCTTT 60.308 47.826 0.00 0.00 33.85 2.52
2649 3270 2.239907 CCGGGGATCTTCCTCTTTTCTT 59.760 50.000 0.00 0.00 33.85 2.52
2650 3271 1.840635 CCGGGGATCTTCCTCTTTTCT 59.159 52.381 0.00 0.00 33.85 2.52
2651 3272 1.747552 GCCGGGGATCTTCCTCTTTTC 60.748 57.143 2.18 0.00 33.85 2.29
2652 3273 0.256177 GCCGGGGATCTTCCTCTTTT 59.744 55.000 2.18 0.00 33.85 2.27
2653 3274 1.636769 GGCCGGGGATCTTCCTCTTT 61.637 60.000 2.18 0.00 33.85 2.52
2654 3275 2.073101 GGCCGGGGATCTTCCTCTT 61.073 63.158 2.18 0.00 33.85 2.85
2655 3276 2.446802 GGCCGGGGATCTTCCTCT 60.447 66.667 2.18 0.00 33.85 3.69
2656 3277 2.446802 AGGCCGGGGATCTTCCTC 60.447 66.667 2.18 0.00 36.57 3.71
2657 3278 2.446802 GAGGCCGGGGATCTTCCT 60.447 66.667 2.18 0.00 36.57 3.36
2658 3279 2.446802 AGAGGCCGGGGATCTTCC 60.447 66.667 2.18 0.00 35.23 3.46
2659 3280 2.825264 CAGAGGCCGGGGATCTTC 59.175 66.667 2.18 0.00 0.00 2.87
2660 3281 3.483869 GCAGAGGCCGGGGATCTT 61.484 66.667 2.18 0.00 0.00 2.40
2661 3282 4.804420 TGCAGAGGCCGGGGATCT 62.804 66.667 2.18 0.00 40.13 2.75
2662 3283 3.543536 GATGCAGAGGCCGGGGATC 62.544 68.421 2.18 9.34 40.13 3.36
2663 3284 3.564218 GATGCAGAGGCCGGGGAT 61.564 66.667 2.18 0.00 40.13 3.85
2665 3286 4.559063 CTGATGCAGAGGCCGGGG 62.559 72.222 2.18 0.00 40.13 5.73
2666 3287 3.035173 TTCTGATGCAGAGGCCGGG 62.035 63.158 2.18 0.00 41.75 5.73
2667 3288 1.817099 GTTCTGATGCAGAGGCCGG 60.817 63.158 0.00 0.00 41.75 6.13
2668 3289 2.169789 CGTTCTGATGCAGAGGCCG 61.170 63.158 0.00 0.00 41.75 6.13
2669 3290 0.179062 ATCGTTCTGATGCAGAGGCC 60.179 55.000 0.00 0.00 41.75 5.19
2670 3291 3.376218 ATCGTTCTGATGCAGAGGC 57.624 52.632 0.00 0.00 41.75 4.70
2678 3299 1.502231 GCCGTATGCATCGTTCTGAT 58.498 50.000 0.19 0.00 40.77 2.90
2679 3300 0.529773 GGCCGTATGCATCGTTCTGA 60.530 55.000 0.19 0.00 43.89 3.27
2680 3301 0.809636 TGGCCGTATGCATCGTTCTG 60.810 55.000 0.19 0.00 43.89 3.02
2681 3302 0.810031 GTGGCCGTATGCATCGTTCT 60.810 55.000 0.19 0.00 43.89 3.01
2682 3303 1.087202 TGTGGCCGTATGCATCGTTC 61.087 55.000 0.19 2.49 43.89 3.95
2683 3304 0.463654 ATGTGGCCGTATGCATCGTT 60.464 50.000 0.19 0.00 43.89 3.85
2684 3305 0.463654 AATGTGGCCGTATGCATCGT 60.464 50.000 0.19 0.00 43.89 3.73
2685 3306 0.662619 AAATGTGGCCGTATGCATCG 59.337 50.000 0.19 7.03 43.89 3.84
2686 3307 4.503741 AATAAATGTGGCCGTATGCATC 57.496 40.909 0.19 0.00 43.89 3.91
2687 3308 6.398234 TTTAATAAATGTGGCCGTATGCAT 57.602 33.333 3.79 3.79 43.89 3.96
2688 3309 5.836821 TTTAATAAATGTGGCCGTATGCA 57.163 34.783 0.00 0.00 43.89 3.96
2689 3310 6.292114 GCTTTTTAATAAATGTGGCCGTATGC 60.292 38.462 0.00 0.00 40.16 3.14
2690 3311 6.754209 TGCTTTTTAATAAATGTGGCCGTATG 59.246 34.615 0.00 0.00 0.00 2.39
2691 3312 6.868622 TGCTTTTTAATAAATGTGGCCGTAT 58.131 32.000 0.00 0.00 0.00 3.06
2692 3313 6.268825 TGCTTTTTAATAAATGTGGCCGTA 57.731 33.333 0.00 0.00 0.00 4.02
2693 3314 5.140747 TGCTTTTTAATAAATGTGGCCGT 57.859 34.783 0.00 0.00 0.00 5.68
2694 3315 6.473397 TTTGCTTTTTAATAAATGTGGCCG 57.527 33.333 0.00 0.00 0.00 6.13
2695 3316 9.986833 CTTATTTGCTTTTTAATAAATGTGGCC 57.013 29.630 0.00 0.00 0.00 5.36
2708 3329 9.476202 GACCTATGTTGAACTTATTTGCTTTTT 57.524 29.630 0.00 0.00 0.00 1.94
2709 3330 8.088365 GGACCTATGTTGAACTTATTTGCTTTT 58.912 33.333 0.00 0.00 0.00 2.27
2710 3331 7.451566 AGGACCTATGTTGAACTTATTTGCTTT 59.548 33.333 0.00 0.00 0.00 3.51
2711 3332 6.948309 AGGACCTATGTTGAACTTATTTGCTT 59.052 34.615 0.00 0.00 0.00 3.91
2712 3333 6.485171 AGGACCTATGTTGAACTTATTTGCT 58.515 36.000 0.00 0.00 0.00 3.91
2713 3334 6.374333 TGAGGACCTATGTTGAACTTATTTGC 59.626 38.462 0.00 0.00 0.00 3.68
2714 3335 7.921786 TGAGGACCTATGTTGAACTTATTTG 57.078 36.000 0.00 0.00 0.00 2.32
2715 3336 8.164070 AGTTGAGGACCTATGTTGAACTTATTT 58.836 33.333 0.00 0.00 0.00 1.40
2716 3337 7.690256 AGTTGAGGACCTATGTTGAACTTATT 58.310 34.615 0.00 0.00 0.00 1.40
2717 3338 7.181125 AGAGTTGAGGACCTATGTTGAACTTAT 59.819 37.037 0.00 0.00 0.00 1.73
2718 3339 6.497259 AGAGTTGAGGACCTATGTTGAACTTA 59.503 38.462 0.00 0.00 0.00 2.24
2719 3340 5.308237 AGAGTTGAGGACCTATGTTGAACTT 59.692 40.000 0.00 0.00 0.00 2.66
2720 3341 4.841246 AGAGTTGAGGACCTATGTTGAACT 59.159 41.667 0.00 0.00 0.00 3.01
2721 3342 5.153950 AGAGTTGAGGACCTATGTTGAAC 57.846 43.478 0.00 0.00 0.00 3.18
2722 3343 4.838423 TGAGAGTTGAGGACCTATGTTGAA 59.162 41.667 0.00 0.00 0.00 2.69
2723 3344 4.416516 TGAGAGTTGAGGACCTATGTTGA 58.583 43.478 0.00 0.00 0.00 3.18
2724 3345 4.808414 TGAGAGTTGAGGACCTATGTTG 57.192 45.455 0.00 0.00 0.00 3.33
2725 3346 4.593206 TGTTGAGAGTTGAGGACCTATGTT 59.407 41.667 0.00 0.00 0.00 2.71
2726 3347 4.160329 TGTTGAGAGTTGAGGACCTATGT 58.840 43.478 0.00 0.00 0.00 2.29
2727 3348 4.808414 TGTTGAGAGTTGAGGACCTATG 57.192 45.455 0.00 0.00 0.00 2.23
2728 3349 5.026121 TCATGTTGAGAGTTGAGGACCTAT 58.974 41.667 0.00 0.00 0.00 2.57
2729 3350 4.416516 TCATGTTGAGAGTTGAGGACCTA 58.583 43.478 0.00 0.00 0.00 3.08
2730 3351 3.242867 TCATGTTGAGAGTTGAGGACCT 58.757 45.455 0.00 0.00 0.00 3.85
2731 3352 3.685139 TCATGTTGAGAGTTGAGGACC 57.315 47.619 0.00 0.00 0.00 4.46
2732 3353 5.240891 TCATTCATGTTGAGAGTTGAGGAC 58.759 41.667 0.00 0.00 0.00 3.85
2733 3354 5.488262 TCATTCATGTTGAGAGTTGAGGA 57.512 39.130 0.00 0.00 0.00 3.71
2734 3355 5.391736 GCTTCATTCATGTTGAGAGTTGAGG 60.392 44.000 0.00 0.00 0.00 3.86
2735 3356 5.180680 TGCTTCATTCATGTTGAGAGTTGAG 59.819 40.000 0.00 0.00 0.00 3.02
2736 3357 5.065235 TGCTTCATTCATGTTGAGAGTTGA 58.935 37.500 0.00 0.00 0.00 3.18
2737 3358 5.366829 TGCTTCATTCATGTTGAGAGTTG 57.633 39.130 0.00 0.00 0.00 3.16
2738 3359 6.395426 TTTGCTTCATTCATGTTGAGAGTT 57.605 33.333 0.00 0.00 0.00 3.01
2739 3360 6.395426 TTTTGCTTCATTCATGTTGAGAGT 57.605 33.333 0.00 0.00 0.00 3.24
2766 3387 5.947228 TTTACCTTCATGCTCTTTGTGAG 57.053 39.130 0.00 0.00 45.33 3.51
2767 3388 6.707440 TTTTTACCTTCATGCTCTTTGTGA 57.293 33.333 0.00 0.00 0.00 3.58
2768 3389 9.474920 TTTATTTTTACCTTCATGCTCTTTGTG 57.525 29.630 0.00 0.00 0.00 3.33
2769 3390 9.696917 CTTTATTTTTACCTTCATGCTCTTTGT 57.303 29.630 0.00 0.00 0.00 2.83
2770 3391 9.696917 ACTTTATTTTTACCTTCATGCTCTTTG 57.303 29.630 0.00 0.00 0.00 2.77
2771 3392 9.914131 GACTTTATTTTTACCTTCATGCTCTTT 57.086 29.630 0.00 0.00 0.00 2.52
2772 3393 9.077885 TGACTTTATTTTTACCTTCATGCTCTT 57.922 29.630 0.00 0.00 0.00 2.85
2773 3394 8.515414 GTGACTTTATTTTTACCTTCATGCTCT 58.485 33.333 0.00 0.00 0.00 4.09
2774 3395 8.296713 TGTGACTTTATTTTTACCTTCATGCTC 58.703 33.333 0.00 0.00 0.00 4.26
2775 3396 8.177119 TGTGACTTTATTTTTACCTTCATGCT 57.823 30.769 0.00 0.00 0.00 3.79
2776 3397 8.699749 GTTGTGACTTTATTTTTACCTTCATGC 58.300 33.333 0.00 0.00 0.00 4.06
2777 3398 9.191995 GGTTGTGACTTTATTTTTACCTTCATG 57.808 33.333 0.00 0.00 0.00 3.07
2778 3399 8.079809 CGGTTGTGACTTTATTTTTACCTTCAT 58.920 33.333 0.00 0.00 0.00 2.57
2779 3400 7.419204 CGGTTGTGACTTTATTTTTACCTTCA 58.581 34.615 0.00 0.00 0.00 3.02
2780 3401 6.859508 CCGGTTGTGACTTTATTTTTACCTTC 59.140 38.462 0.00 0.00 0.00 3.46
2781 3402 6.736519 GCCGGTTGTGACTTTATTTTTACCTT 60.737 38.462 1.90 0.00 0.00 3.50
2782 3403 5.278610 GCCGGTTGTGACTTTATTTTTACCT 60.279 40.000 1.90 0.00 0.00 3.08
2783 3404 4.919168 GCCGGTTGTGACTTTATTTTTACC 59.081 41.667 1.90 0.00 0.00 2.85
2784 3405 5.627780 CAGCCGGTTGTGACTTTATTTTTAC 59.372 40.000 10.61 0.00 0.00 2.01
2785 3406 5.278561 CCAGCCGGTTGTGACTTTATTTTTA 60.279 40.000 17.69 0.00 0.00 1.52
2786 3407 4.500716 CCAGCCGGTTGTGACTTTATTTTT 60.501 41.667 17.69 0.00 0.00 1.94
2787 3408 3.005367 CCAGCCGGTTGTGACTTTATTTT 59.995 43.478 17.69 0.00 0.00 1.82
2788 3409 2.556622 CCAGCCGGTTGTGACTTTATTT 59.443 45.455 17.69 0.00 0.00 1.40
2789 3410 2.159382 CCAGCCGGTTGTGACTTTATT 58.841 47.619 17.69 0.00 0.00 1.40
2790 3411 1.821216 CCAGCCGGTTGTGACTTTAT 58.179 50.000 17.69 0.00 0.00 1.40
2791 3412 0.887387 GCCAGCCGGTTGTGACTTTA 60.887 55.000 17.69 0.00 33.28 1.85
2792 3413 2.193536 GCCAGCCGGTTGTGACTTT 61.194 57.895 17.69 0.00 33.28 2.66
2793 3414 2.594592 GCCAGCCGGTTGTGACTT 60.595 61.111 17.69 0.00 33.28 3.01
2794 3415 4.643387 GGCCAGCCGGTTGTGACT 62.643 66.667 17.69 0.00 33.28 3.41
2795 3416 4.947147 TGGCCAGCCGGTTGTGAC 62.947 66.667 17.69 11.27 39.42 3.67
2796 3417 3.723097 TTTGGCCAGCCGGTTGTGA 62.723 57.895 17.69 0.00 39.42 3.58
2797 3418 2.697992 CTTTTGGCCAGCCGGTTGTG 62.698 60.000 17.69 9.73 39.42 3.33
2798 3419 2.443016 TTTTGGCCAGCCGGTTGT 60.443 55.556 17.69 0.00 39.42 3.32
2799 3420 1.743321 TTCTTTTGGCCAGCCGGTTG 61.743 55.000 11.98 11.98 39.42 3.77
2800 3421 1.045911 TTTCTTTTGGCCAGCCGGTT 61.046 50.000 5.11 0.00 39.42 4.44
2801 3422 1.456705 TTTCTTTTGGCCAGCCGGT 60.457 52.632 5.11 0.00 39.42 5.28
2802 3423 1.178534 TCTTTCTTTTGGCCAGCCGG 61.179 55.000 5.11 0.00 39.42 6.13
2803 3424 0.890683 ATCTTTCTTTTGGCCAGCCG 59.109 50.000 5.11 0.00 39.42 5.52
2804 3425 3.790152 CTATCTTTCTTTTGGCCAGCC 57.210 47.619 5.11 0.38 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.