Multiple sequence alignment - TraesCS6B01G402600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G402600 chr6B 100.000 6348 0 0 1 6348 678734596 678740943 0.000000e+00 11723.0
1 TraesCS6B01G402600 chr6B 82.789 337 48 7 6020 6346 679244874 679244538 6.220000e-75 292.0
2 TraesCS6B01G402600 chr6B 80.952 336 60 3 6017 6348 678745244 678745579 4.880000e-66 263.0
3 TraesCS6B01G402600 chr6B 90.385 52 4 1 730 781 102136551 102136601 4.110000e-07 67.6
4 TraesCS6B01G402600 chr6A 94.273 2916 144 15 2600 5502 594493627 594496532 0.000000e+00 4438.0
5 TraesCS6B01G402600 chr6A 87.095 1914 97 59 1 1819 594491135 594492993 0.000000e+00 2028.0
6 TraesCS6B01G402600 chr6A 91.289 551 33 9 1884 2427 594493021 594493563 0.000000e+00 737.0
7 TraesCS6B01G402600 chr6A 89.635 521 32 12 5514 6020 594496702 594497214 1.490000e-180 643.0
8 TraesCS6B01G402600 chr6A 95.669 254 10 1 6096 6348 594498261 594498514 2.130000e-109 407.0
9 TraesCS6B01G402600 chr6A 97.959 49 1 0 6020 6068 594498212 594498260 1.130000e-12 86.1
10 TraesCS6B01G402600 chr6D 92.609 1556 81 17 4482 6020 447908841 447910379 0.000000e+00 2206.0
11 TraesCS6B01G402600 chr6D 87.493 1887 97 56 32 1819 447904506 447906352 0.000000e+00 2049.0
12 TraesCS6B01G402600 chr6D 94.826 1121 48 6 3321 4433 447907712 447908830 0.000000e+00 1740.0
13 TraesCS6B01G402600 chr6D 94.271 803 41 1 2489 3286 447906912 447907714 0.000000e+00 1223.0
14 TraesCS6B01G402600 chr6D 90.018 541 39 10 1884 2422 447906377 447906904 0.000000e+00 686.0
15 TraesCS6B01G402600 chr6D 93.114 334 20 3 6017 6348 447914210 447914542 2.660000e-133 486.0
16 TraesCS6B01G402600 chr6D 83.544 237 35 3 6030 6262 448025924 448026160 1.070000e-52 219.0
17 TraesCS6B01G402600 chr6D 97.297 37 1 0 4 40 447904102 447904138 5.310000e-06 63.9
18 TraesCS6B01G402600 chr3D 84.478 335 23 6 5708 6020 143023699 143024026 2.880000e-78 303.0
19 TraesCS6B01G402600 chr7D 83.582 335 27 5 5707 6020 383405938 383405611 8.050000e-74 289.0
20 TraesCS6B01G402600 chr7D 82.985 335 28 10 5707 6020 100778351 100778677 6.270000e-70 276.0
21 TraesCS6B01G402600 chr2D 83.582 335 26 10 5707 6020 577524221 577523895 2.900000e-73 287.0
22 TraesCS6B01G402600 chr5D 83.284 335 28 5 5707 6020 449433496 449433823 3.750000e-72 283.0
23 TraesCS6B01G402600 chr5D 96.875 32 1 0 759 790 386040645 386040614 3.000000e-03 54.7
24 TraesCS6B01G402600 chr7A 77.011 348 68 11 4027 4368 92894775 92894434 8.400000e-44 189.0
25 TraesCS6B01G402600 chr4A 78.541 233 46 2 6040 6271 697503681 697503452 3.960000e-32 150.0
26 TraesCS6B01G402600 chr4A 77.350 234 49 2 6039 6271 696600570 696600800 1.110000e-27 135.0
27 TraesCS6B01G402600 chr4A 77.193 228 48 2 6026 6252 697574133 697573909 5.160000e-26 130.0
28 TraesCS6B01G402600 chr2B 85.859 99 13 1 684 782 53941221 53941124 3.130000e-18 104.0
29 TraesCS6B01G402600 chr2A 85.417 96 10 4 696 790 20562843 20562751 5.240000e-16 97.1
30 TraesCS6B01G402600 chr5B 87.059 85 10 1 706 790 223986423 223986340 1.880000e-15 95.3
31 TraesCS6B01G402600 chr5A 86.486 74 7 3 718 790 647608026 647607955 1.900000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G402600 chr6B 678734596 678740943 6347 False 11723.00 11723 100.000000 1 6348 1 chr6B.!!$F2 6347
1 TraesCS6B01G402600 chr6A 594491135 594498514 7379 False 1389.85 4438 92.653333 1 6348 6 chr6A.!!$F1 6347
2 TraesCS6B01G402600 chr6D 447904102 447914542 10440 False 1207.70 2206 92.804000 4 6348 7 chr6D.!!$F2 6344

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
746 1171 1.140161 CTTGTATCGTTCGGCCGGA 59.860 57.895 27.83 16.16 0.00 5.14 F
1057 1512 0.825840 CCACCGGAAAACCACCACAT 60.826 55.000 9.46 0.00 0.00 3.21 F
2517 3022 0.248825 TCATTTTTGCGCGCACAACT 60.249 45.000 36.72 25.09 0.00 3.16 F
3183 3694 0.550914 GAGGGCCATGGGATTACACA 59.449 55.000 15.13 0.00 0.00 3.72 F
3254 3765 0.749454 GGCTGGGAGCTTGGTATGTG 60.749 60.000 0.00 0.00 41.99 3.21 F
3884 4396 0.850784 ATTTAGGCCCCGGTATGCTT 59.149 50.000 0.00 0.00 0.00 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2499 3004 0.111617 CAGTTGTGCGCGCAAAAATG 60.112 50.000 39.30 39.30 33.80 2.32 R
2691 3201 0.526954 GGCAGCATTCATGAAAGCGG 60.527 55.000 25.04 25.04 39.69 5.52 R
4285 4805 0.249573 CAACCAAGGTTTGCCTGCAG 60.250 55.000 6.78 6.78 46.33 4.41 R
4915 5437 0.183492 ACCTTCTGTGCTCCTTTGCA 59.817 50.000 0.00 0.00 41.05 4.08 R
4951 5473 0.467290 TTGTGAGCCCAGGTGTTTCC 60.467 55.000 0.00 0.00 0.00 3.13 R
5528 6215 2.009774 AGAAAATGCACGGGAGAATCG 58.990 47.619 0.00 0.00 34.37 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 461 5.891551 GGAGGGCTAACCAAAATTCTATCAA 59.108 40.000 0.00 0.00 43.89 2.57
181 558 5.941788 AGACCCCAATGTCCAATAATAGAC 58.058 41.667 0.00 0.00 35.83 2.59
221 598 5.855395 CACTTTGAGAGCTTCTTGCATTTAC 59.145 40.000 0.00 0.00 45.94 2.01
309 686 7.775053 AACCTAGCATCTAAACCAAATCAAA 57.225 32.000 0.00 0.00 0.00 2.69
445 822 2.392662 AGCTATGCAGGAGTCAGCTTA 58.607 47.619 8.09 5.60 39.49 3.09
560 955 4.793071 TGAAATTTGTAACAGGTCGCATG 58.207 39.130 0.00 0.00 0.00 4.06
564 959 1.790755 TGTAACAGGTCGCATGTGTC 58.209 50.000 6.09 0.00 0.00 3.67
609 1005 9.606631 TTTGCGCATACATACATATATCCATTA 57.393 29.630 12.75 0.00 0.00 1.90
640 1037 3.442076 ACAAAAGTGTGTTTTGGGGGTA 58.558 40.909 13.28 0.00 42.09 3.69
643 1040 5.045505 ACAAAAGTGTGTTTTGGGGGTAAAT 60.046 36.000 13.28 0.00 42.09 1.40
644 1041 4.948341 AAGTGTGTTTTGGGGGTAAATC 57.052 40.909 0.00 0.00 0.00 2.17
678 1103 3.393800 CAAAGATCGGCGTTCATCCTAT 58.606 45.455 19.04 0.00 0.00 2.57
701 1126 2.774809 TGTTCCGGTTATCATGGGATCA 59.225 45.455 0.00 0.00 34.89 2.92
702 1127 3.201045 TGTTCCGGTTATCATGGGATCAA 59.799 43.478 0.00 0.00 34.89 2.57
712 1137 4.479786 TCATGGGATCAACGTTGTATGA 57.520 40.909 26.47 22.36 0.00 2.15
737 1162 3.068307 GCTACCTCATCACCTTGTATCGT 59.932 47.826 0.00 0.00 0.00 3.73
745 1170 1.881252 CCTTGTATCGTTCGGCCGG 60.881 63.158 27.83 9.82 0.00 6.13
746 1171 1.140161 CTTGTATCGTTCGGCCGGA 59.860 57.895 27.83 16.16 0.00 5.14
783 1208 8.643752 CGGTTGTTGTTTTATTTATAAAGCAGG 58.356 33.333 3.94 0.00 41.93 4.85
784 1209 9.699703 GGTTGTTGTTTTATTTATAAAGCAGGA 57.300 29.630 3.94 2.02 41.93 3.86
799 1224 2.093764 AGCAGGACGAAATTCAGAGAGG 60.094 50.000 0.00 0.00 0.00 3.69
804 1229 3.429684 GGACGAAATTCAGAGAGGGAGAC 60.430 52.174 0.00 0.00 0.00 3.36
824 1270 4.338118 AGACGAGCATTTTCCAAAGAAACA 59.662 37.500 0.00 0.00 41.69 2.83
909 1359 3.117169 CCCCTAAATCCCCAATGACATGA 60.117 47.826 0.00 0.00 0.00 3.07
912 1362 5.711976 CCCTAAATCCCCAATGACATGATAC 59.288 44.000 0.00 0.00 0.00 2.24
1057 1512 0.825840 CCACCGGAAAACCACCACAT 60.826 55.000 9.46 0.00 0.00 3.21
1069 1524 4.473520 CCACATCCCGCCGCTCTT 62.474 66.667 0.00 0.00 0.00 2.85
1080 1541 3.157949 CGCTCTTCCTCCCCCTCC 61.158 72.222 0.00 0.00 0.00 4.30
1084 1545 1.550374 TCTTCCTCCCCCTCCCTCT 60.550 63.158 0.00 0.00 0.00 3.69
1085 1546 1.074850 CTTCCTCCCCCTCCCTCTC 60.075 68.421 0.00 0.00 0.00 3.20
1087 1548 1.595058 TTCCTCCCCCTCCCTCTCTC 61.595 65.000 0.00 0.00 0.00 3.20
1088 1549 2.612251 CTCCCCCTCCCTCTCTCC 59.388 72.222 0.00 0.00 0.00 3.71
1089 1550 2.204624 TCCCCCTCCCTCTCTCCA 60.205 66.667 0.00 0.00 0.00 3.86
1090 1551 1.630333 TCCCCCTCCCTCTCTCCAT 60.630 63.158 0.00 0.00 0.00 3.41
1104 1574 1.632409 TCTCCATGGCAAGAAGAAGCT 59.368 47.619 6.96 0.00 0.00 3.74
1105 1575 2.840038 TCTCCATGGCAAGAAGAAGCTA 59.160 45.455 6.96 0.00 0.00 3.32
1106 1576 3.118482 TCTCCATGGCAAGAAGAAGCTAG 60.118 47.826 6.96 0.00 0.00 3.42
1107 1577 1.674962 CCATGGCAAGAAGAAGCTAGC 59.325 52.381 6.62 6.62 0.00 3.42
1108 1578 2.641305 CATGGCAAGAAGAAGCTAGCT 58.359 47.619 12.68 12.68 0.00 3.32
1109 1579 2.867109 TGGCAAGAAGAAGCTAGCTT 57.133 45.000 29.71 29.71 39.23 3.74
1110 1580 2.430465 TGGCAAGAAGAAGCTAGCTTG 58.570 47.619 33.91 19.89 40.40 4.01
1127 1597 1.625818 CTTGTAGCTTCCCTCACCTGT 59.374 52.381 0.00 0.00 0.00 4.00
1128 1598 0.976641 TGTAGCTTCCCTCACCTGTG 59.023 55.000 0.00 0.00 0.00 3.66
1186 1656 2.806244 CCGGTGTAGTTCTTGGTTCTTG 59.194 50.000 0.00 0.00 0.00 3.02
1192 1662 2.310538 AGTTCTTGGTTCTTGGCTTGG 58.689 47.619 0.00 0.00 0.00 3.61
1193 1663 1.039856 TTCTTGGTTCTTGGCTTGGC 58.960 50.000 0.00 0.00 0.00 4.52
1478 1948 0.919710 GGCCTCCTCAACCTGGTAAT 59.080 55.000 0.00 0.00 0.00 1.89
1479 1949 2.124411 GGCCTCCTCAACCTGGTAATA 58.876 52.381 0.00 0.00 0.00 0.98
1480 1950 2.508300 GGCCTCCTCAACCTGGTAATAA 59.492 50.000 0.00 0.00 0.00 1.40
1482 1952 3.684697 GCCTCCTCAACCTGGTAATAACC 60.685 52.174 0.00 0.00 46.98 2.85
1483 1953 3.780850 CCTCCTCAACCTGGTAATAACCT 59.219 47.826 0.00 0.00 46.91 3.50
1484 1954 4.141688 CCTCCTCAACCTGGTAATAACCTC 60.142 50.000 0.00 0.00 46.91 3.85
1485 1955 4.431378 TCCTCAACCTGGTAATAACCTCA 58.569 43.478 0.00 0.00 46.91 3.86
1487 1957 4.225267 CCTCAACCTGGTAATAACCTCACT 59.775 45.833 0.00 0.00 46.91 3.41
1493 1963 4.020573 CCTGGTAATAACCTCACTCACACA 60.021 45.833 0.00 0.00 46.91 3.72
1495 1965 4.251268 GGTAATAACCTCACTCACACACC 58.749 47.826 0.00 0.00 43.08 4.16
1505 1975 1.141053 ACTCACACACCCTCTGTTTCC 59.859 52.381 0.00 0.00 0.00 3.13
1514 1984 0.969894 CCTCTGTTTCCGTCCTCTGT 59.030 55.000 0.00 0.00 0.00 3.41
1515 1985 1.067495 CCTCTGTTTCCGTCCTCTGTC 60.067 57.143 0.00 0.00 0.00 3.51
1516 1986 1.613925 CTCTGTTTCCGTCCTCTGTCA 59.386 52.381 0.00 0.00 0.00 3.58
1560 2031 1.663135 GAGACGCTTGAAATCTCTGCC 59.337 52.381 0.00 0.00 36.69 4.85
1567 2039 4.325472 CGCTTGAAATCTCTGCCAAATTTC 59.675 41.667 0.00 0.00 39.01 2.17
1573 2045 8.314143 TGAAATCTCTGCCAAATTTCAAAATC 57.686 30.769 7.16 0.00 43.02 2.17
1574 2046 7.388500 TGAAATCTCTGCCAAATTTCAAAATCC 59.612 33.333 7.16 0.00 43.02 3.01
1575 2047 6.616237 ATCTCTGCCAAATTTCAAAATCCT 57.384 33.333 0.00 0.00 0.00 3.24
1576 2048 5.786311 TCTCTGCCAAATTTCAAAATCCTG 58.214 37.500 0.00 0.00 0.00 3.86
1596 2068 2.485426 TGTTGTTTGAGCTCTGCATAGC 59.515 45.455 15.84 15.84 43.11 2.97
1606 2081 5.411669 TGAGCTCTGCATAGCATATGAATTG 59.588 40.000 24.15 0.97 45.30 2.32
1690 2182 1.039233 AGCGCCATGGATCTTTTGGG 61.039 55.000 18.40 0.00 0.00 4.12
1716 2208 4.517075 GGATAGGAATTTTGACAGCCTAGC 59.483 45.833 0.00 0.00 37.00 3.42
1717 2209 3.728385 AGGAATTTTGACAGCCTAGCT 57.272 42.857 0.00 0.00 40.77 3.32
1718 2210 4.844349 AGGAATTTTGACAGCCTAGCTA 57.156 40.909 0.00 0.00 36.40 3.32
1719 2211 4.775236 AGGAATTTTGACAGCCTAGCTAG 58.225 43.478 14.20 14.20 36.40 3.42
1744 2236 3.387050 AGGAGATTACACGGACCCATAAC 59.613 47.826 0.00 0.00 0.00 1.89
1745 2237 3.387050 GGAGATTACACGGACCCATAACT 59.613 47.826 0.00 0.00 0.00 2.24
1819 2312 3.166434 CCACTGCCCACCAACCTA 58.834 61.111 0.00 0.00 0.00 3.08
1820 2313 1.691219 CCACTGCCCACCAACCTAT 59.309 57.895 0.00 0.00 0.00 2.57
1821 2314 0.916086 CCACTGCCCACCAACCTATA 59.084 55.000 0.00 0.00 0.00 1.31
1822 2315 1.283613 CCACTGCCCACCAACCTATAA 59.716 52.381 0.00 0.00 0.00 0.98
1823 2316 2.091885 CCACTGCCCACCAACCTATAAT 60.092 50.000 0.00 0.00 0.00 1.28
1824 2317 3.627237 CCACTGCCCACCAACCTATAATT 60.627 47.826 0.00 0.00 0.00 1.40
1825 2318 4.385865 CCACTGCCCACCAACCTATAATTA 60.386 45.833 0.00 0.00 0.00 1.40
1827 2320 5.299279 CACTGCCCACCAACCTATAATTAAG 59.701 44.000 0.00 0.00 0.00 1.85
1828 2321 5.192923 ACTGCCCACCAACCTATAATTAAGA 59.807 40.000 0.00 0.00 0.00 2.10
1829 2322 5.690865 TGCCCACCAACCTATAATTAAGAG 58.309 41.667 0.00 0.00 0.00 2.85
1830 2323 5.192923 TGCCCACCAACCTATAATTAAGAGT 59.807 40.000 0.00 0.00 0.00 3.24
1832 2325 6.296803 CCCACCAACCTATAATTAAGAGTCC 58.703 44.000 0.00 0.00 0.00 3.85
1833 2326 6.101296 CCCACCAACCTATAATTAAGAGTCCT 59.899 42.308 0.00 0.00 0.00 3.85
1834 2327 7.217906 CCACCAACCTATAATTAAGAGTCCTC 58.782 42.308 0.00 0.00 0.00 3.71
1835 2328 7.217906 CACCAACCTATAATTAAGAGTCCTCC 58.782 42.308 0.00 0.00 0.00 4.30
1836 2329 7.071321 CACCAACCTATAATTAAGAGTCCTCCT 59.929 40.741 0.00 0.00 0.00 3.69
1837 2330 7.071321 ACCAACCTATAATTAAGAGTCCTCCTG 59.929 40.741 0.00 0.00 0.00 3.86
1838 2331 6.673839 ACCTATAATTAAGAGTCCTCCTGC 57.326 41.667 0.00 0.00 0.00 4.85
1840 2333 5.544176 CCTATAATTAAGAGTCCTCCTGCCA 59.456 44.000 0.00 0.00 0.00 4.92
1841 2334 5.975988 ATAATTAAGAGTCCTCCTGCCAA 57.024 39.130 0.00 0.00 0.00 4.52
1842 2335 3.636153 ATTAAGAGTCCTCCTGCCAAC 57.364 47.619 0.00 0.00 0.00 3.77
1843 2336 2.024176 TAAGAGTCCTCCTGCCAACA 57.976 50.000 0.00 0.00 0.00 3.33
1844 2337 1.366319 AAGAGTCCTCCTGCCAACAT 58.634 50.000 0.00 0.00 0.00 2.71
1845 2338 1.366319 AGAGTCCTCCTGCCAACATT 58.634 50.000 0.00 0.00 0.00 2.71
1846 2339 1.280421 AGAGTCCTCCTGCCAACATTC 59.720 52.381 0.00 0.00 0.00 2.67
1847 2340 1.003580 GAGTCCTCCTGCCAACATTCA 59.996 52.381 0.00 0.00 0.00 2.57
1848 2341 1.425066 AGTCCTCCTGCCAACATTCAA 59.575 47.619 0.00 0.00 0.00 2.69
1849 2342 2.158475 AGTCCTCCTGCCAACATTCAAA 60.158 45.455 0.00 0.00 0.00 2.69
1850 2343 2.627699 GTCCTCCTGCCAACATTCAAAA 59.372 45.455 0.00 0.00 0.00 2.44
1851 2344 3.069443 GTCCTCCTGCCAACATTCAAAAA 59.931 43.478 0.00 0.00 0.00 1.94
1876 2369 6.759497 AAAATAATTAAGAGAAGCGGCACT 57.241 33.333 1.45 0.44 0.00 4.40
1877 2370 5.993106 AATAATTAAGAGAAGCGGCACTC 57.007 39.130 15.75 15.75 0.00 3.51
1878 2371 2.317530 ATTAAGAGAAGCGGCACTCC 57.682 50.000 18.49 6.23 34.13 3.85
1895 2388 4.566004 CACTCCGAAGTCCAAACAGATTA 58.434 43.478 0.00 0.00 31.71 1.75
1902 2395 6.183360 CCGAAGTCCAAACAGATTAGATTTCC 60.183 42.308 0.00 0.00 0.00 3.13
1937 2430 6.898041 TGACAAAATTTCAGAACTCATACCG 58.102 36.000 0.00 0.00 0.00 4.02
1943 2436 3.313012 TCAGAACTCATACCGGTTGTG 57.687 47.619 15.04 13.20 37.83 3.33
1961 2454 5.927115 GGTTGTGGCAACGGAATTTATTAAA 59.073 36.000 6.00 0.00 42.51 1.52
1996 2489 4.038080 GGTCACTTTTGGCGCCGG 62.038 66.667 23.90 14.13 0.00 6.13
2034 2527 2.121538 GCGGGAAATGAGGCCTTCC 61.122 63.158 6.77 10.14 40.44 3.46
2041 2534 4.065789 GGAAATGAGGCCTTCCGTATTAG 58.934 47.826 6.77 0.00 37.47 1.73
2042 2535 4.444449 GGAAATGAGGCCTTCCGTATTAGT 60.444 45.833 6.77 0.00 37.47 2.24
2043 2536 5.221581 GGAAATGAGGCCTTCCGTATTAGTA 60.222 44.000 6.77 0.00 37.47 1.82
2044 2537 5.470047 AATGAGGCCTTCCGTATTAGTAG 57.530 43.478 6.77 0.00 37.47 2.57
2045 2538 3.228453 TGAGGCCTTCCGTATTAGTAGG 58.772 50.000 6.77 0.00 37.47 3.18
2046 2539 3.117398 TGAGGCCTTCCGTATTAGTAGGA 60.117 47.826 6.77 0.00 37.47 2.94
2047 2540 3.893813 GAGGCCTTCCGTATTAGTAGGAA 59.106 47.826 6.77 0.00 41.28 3.36
2048 2541 4.292643 AGGCCTTCCGTATTAGTAGGAAA 58.707 43.478 0.00 0.00 42.71 3.13
2049 2542 4.344390 AGGCCTTCCGTATTAGTAGGAAAG 59.656 45.833 0.00 0.00 42.71 2.62
2053 2546 6.820152 GCCTTCCGTATTAGTAGGAAAGAAAA 59.180 38.462 0.00 0.00 42.71 2.29
2089 2582 3.359654 GTCTTCGTGAAATTGTTGCGTT 58.640 40.909 0.00 0.00 0.00 4.84
2133 2630 9.322773 CATGTGAAATATATATGTAGAGCAGGG 57.677 37.037 0.00 0.00 0.00 4.45
2137 2634 6.891306 AATATATATGTAGAGCAGGGGCAA 57.109 37.500 0.00 0.00 44.61 4.52
2138 2635 2.938956 ATATGTAGAGCAGGGGCAAC 57.061 50.000 0.00 0.00 44.61 4.17
2337 2837 2.236395 ACTACCACTAACCCTGTGATGC 59.764 50.000 0.00 0.00 37.60 3.91
2340 2840 1.453155 CACTAACCCTGTGATGCCAC 58.547 55.000 0.00 0.00 43.46 5.01
2394 2895 7.661027 CCAATCAATAGAACAACCCACAATTTT 59.339 33.333 0.00 0.00 0.00 1.82
2402 2903 8.887036 AGAACAACCCACAATTTTCTATTTTC 57.113 30.769 0.00 0.00 0.00 2.29
2437 2942 8.847196 AGAAACAACAACTAAAATTCTAGTCCC 58.153 33.333 0.00 0.00 30.67 4.46
2438 2943 8.762481 AAACAACAACTAAAATTCTAGTCCCT 57.238 30.769 0.00 0.00 30.67 4.20
2439 2944 7.981102 ACAACAACTAAAATTCTAGTCCCTC 57.019 36.000 0.00 0.00 30.67 4.30
2440 2945 6.649557 ACAACAACTAAAATTCTAGTCCCTCG 59.350 38.462 0.00 0.00 30.67 4.63
2441 2946 5.176592 ACAACTAAAATTCTAGTCCCTCGC 58.823 41.667 0.00 0.00 30.67 5.03
2442 2947 5.175859 CAACTAAAATTCTAGTCCCTCGCA 58.824 41.667 0.00 0.00 30.67 5.10
2443 2948 5.416271 ACTAAAATTCTAGTCCCTCGCAA 57.584 39.130 0.00 0.00 0.00 4.85
2444 2949 5.801380 ACTAAAATTCTAGTCCCTCGCAAA 58.199 37.500 0.00 0.00 0.00 3.68
2445 2950 6.235664 ACTAAAATTCTAGTCCCTCGCAAAA 58.764 36.000 0.00 0.00 0.00 2.44
2446 2951 6.713450 ACTAAAATTCTAGTCCCTCGCAAAAA 59.287 34.615 0.00 0.00 0.00 1.94
2489 2994 9.964354 TTCTAGTATAATCTATACCCGTAGCAA 57.036 33.333 1.13 0.00 41.49 3.91
2492 2997 8.647256 AGTATAATCTATACCCGTAGCAACTT 57.353 34.615 1.13 0.00 41.49 2.66
2499 3004 8.652810 TCTATACCCGTAGCAACTTAATTTTC 57.347 34.615 0.00 0.00 0.00 2.29
2513 3018 2.575589 ATTTTCATTTTTGCGCGCAC 57.424 40.000 36.72 4.65 0.00 5.34
2514 3019 1.280982 TTTTCATTTTTGCGCGCACA 58.719 40.000 36.72 27.06 0.00 4.57
2517 3022 0.248825 TCATTTTTGCGCGCACAACT 60.249 45.000 36.72 25.09 0.00 3.16
2522 3027 0.734253 TTTGCGCGCACAACTGTTTT 60.734 45.000 36.72 0.00 0.00 2.43
2626 3136 1.489649 CAGCCATGATTGTCTCCCTCT 59.510 52.381 0.00 0.00 0.00 3.69
2684 3194 0.796927 GAAAGGTAAGGCACGCTCAC 59.203 55.000 0.00 0.00 0.00 3.51
2691 3201 3.050275 GGCACGCTCACCACCTTC 61.050 66.667 0.00 0.00 0.00 3.46
2781 3291 4.338710 CCCGGCGGTTCCTTTCCA 62.339 66.667 26.32 0.00 0.00 3.53
2971 3481 2.813754 CAACGCCTTCTTCCAGAAATCA 59.186 45.455 0.00 0.00 33.19 2.57
3008 3518 3.381272 CGTAATCGGTAACCCCAACTCTA 59.619 47.826 0.00 0.00 0.00 2.43
3077 3588 9.420118 TGATAATGTGACCTTATTGGCTTATTT 57.580 29.630 0.00 0.00 40.22 1.40
3183 3694 0.550914 GAGGGCCATGGGATTACACA 59.449 55.000 15.13 0.00 0.00 3.72
3254 3765 0.749454 GGCTGGGAGCTTGGTATGTG 60.749 60.000 0.00 0.00 41.99 3.21
3389 3900 8.579850 AGTATGATCAAGAGAGATCCTGATAC 57.420 38.462 0.00 0.00 42.95 2.24
3481 3992 6.489603 TGTAAAGAGCAAGGGGAAATATCAA 58.510 36.000 0.00 0.00 0.00 2.57
3483 3994 7.619302 TGTAAAGAGCAAGGGGAAATATCAATT 59.381 33.333 0.00 0.00 0.00 2.32
3524 4035 3.513462 TTTCACGCGTTACTCAATGTG 57.487 42.857 10.22 0.00 37.23 3.21
3533 4044 4.791411 GCGTTACTCAATGTGCAAAAAGGA 60.791 41.667 0.00 0.00 0.00 3.36
3662 4174 0.944386 TTGCAGGAAACGAACTCAGC 59.056 50.000 0.00 0.00 0.00 4.26
3729 4241 3.826157 GGATGTGATCAACCTGAACCAAA 59.174 43.478 0.00 0.00 34.31 3.28
3884 4396 0.850784 ATTTAGGCCCCGGTATGCTT 59.149 50.000 0.00 0.00 0.00 3.91
3891 4403 1.453745 CCCGGTATGCTTGCCATGT 60.454 57.895 0.00 0.00 35.34 3.21
3893 4405 1.643292 CGGTATGCTTGCCATGTCG 59.357 57.895 7.48 0.00 35.34 4.35
3907 4419 2.202388 GTCGCACCGTCGATTCGA 60.202 61.111 4.29 4.29 40.84 3.71
3923 4435 4.084066 CGATTCGACACATGAACTGGAAAA 60.084 41.667 0.00 0.00 0.00 2.29
3924 4436 5.559991 CGATTCGACACATGAACTGGAAAAA 60.560 40.000 0.00 0.00 0.00 1.94
4151 4663 3.293311 ACTGATGCATTTGTGTTCAGC 57.707 42.857 10.41 0.00 37.84 4.26
4162 4674 4.415881 TTGTGTTCAGCTTCTGGTAAGA 57.584 40.909 0.00 0.00 31.51 2.10
4163 4675 4.415881 TGTGTTCAGCTTCTGGTAAGAA 57.584 40.909 0.00 0.00 40.20 2.52
4190 4702 8.169977 AGAAAATGATCAGCAGTTGAAGTTAA 57.830 30.769 0.09 0.00 39.77 2.01
4239 4759 7.523293 TTATGACATGTTGATGTTTCAGGTT 57.477 32.000 0.00 0.00 43.22 3.50
4285 4805 5.429615 GCAAAGTACGACACAAAGAGTTAC 58.570 41.667 0.00 0.00 0.00 2.50
4312 4832 1.686587 CAAACCTTGGTTGGAGGGAAC 59.313 52.381 5.74 0.00 38.65 3.62
4321 4841 1.134068 GTTGGAGGGAACTATGGCCTC 60.134 57.143 3.32 0.00 44.43 4.70
4469 4989 8.659491 CATAAATCATGATTACATACCAGTCGG 58.341 37.037 21.00 1.16 36.69 4.79
4470 4990 3.990092 TCATGATTACATACCAGTCGGC 58.010 45.455 0.00 0.00 35.09 5.54
4487 5007 2.543848 TCGGCGCATGTCTAAAATCATC 59.456 45.455 10.83 0.00 0.00 2.92
4579 5099 4.099881 ACTGAAACATGATGCCAAACTTGT 59.900 37.500 0.00 0.00 0.00 3.16
4697 5217 4.328983 ACAAACAAGATCCGTGCTTATACG 59.671 41.667 0.00 0.00 43.35 3.06
4797 5319 8.387190 ACCAACTGACCTGTACTAAATTTTAC 57.613 34.615 0.00 0.00 0.00 2.01
4798 5320 7.446319 ACCAACTGACCTGTACTAAATTTTACC 59.554 37.037 0.00 0.00 0.00 2.85
4799 5321 7.094506 CCAACTGACCTGTACTAAATTTTACCC 60.095 40.741 0.00 0.00 0.00 3.69
4910 5432 4.514577 AAGAGGTCGCGCATCCCG 62.515 66.667 8.75 0.00 40.75 5.14
4958 5480 3.562635 CGAAGCTCGGGGAAACAC 58.437 61.111 0.00 0.00 36.00 3.32
5020 5542 1.518903 GGAACCTGCAGAGCCAACAC 61.519 60.000 17.39 0.00 0.00 3.32
5034 5556 1.542472 CCAACACATGCTGCTCAATGA 59.458 47.619 0.00 0.00 0.00 2.57
5050 5572 1.252904 ATGACAATGTGCTGGCCACC 61.253 55.000 0.00 0.00 44.01 4.61
5102 5624 0.465460 TGTGCAGGTTGAGGGAACAC 60.465 55.000 0.00 0.00 36.12 3.32
5134 5656 0.331278 TGGGCCCTTACTCCATTGTG 59.669 55.000 25.70 0.00 0.00 3.33
5237 5760 0.108281 GGTTAGAGGAAGTGCCGGTC 60.108 60.000 1.90 0.00 43.43 4.79
5299 5822 2.035704 TGTAAGGCTGCAATGTTTGTGG 59.964 45.455 0.50 0.00 0.00 4.17
5369 5894 4.262592 GCACATGAAAGAAATGAAAGGGGT 60.263 41.667 0.00 0.00 0.00 4.95
5425 5950 8.902806 TCTGTCATTCTGTTTTTATTGACACTT 58.097 29.630 0.00 0.00 38.71 3.16
5468 5993 6.648879 AGCTCCTTTTTGTTACTAATGCAA 57.351 33.333 0.00 0.00 0.00 4.08
5502 6027 8.840321 GCTGCTTTCAGTATATGATAGGAAAAA 58.160 33.333 0.00 0.00 42.29 1.94
5724 6411 0.545171 ACTGAGACAGCATCCCATGG 59.455 55.000 4.14 4.14 34.37 3.66
5743 6430 7.012607 CCCATGGTCCAGATATAAATTCCTTT 58.987 38.462 11.73 0.00 0.00 3.11
5773 6460 3.998341 GTCGCCTTTACCAACATAGAACA 59.002 43.478 0.00 0.00 0.00 3.18
5780 6467 7.553044 GCCTTTACCAACATAGAACATCTACTT 59.447 37.037 0.00 0.00 30.79 2.24
5781 6468 9.099454 CCTTTACCAACATAGAACATCTACTTC 57.901 37.037 0.00 0.00 30.79 3.01
5782 6469 9.099454 CTTTACCAACATAGAACATCTACTTCC 57.901 37.037 0.00 0.00 30.79 3.46
5804 6491 8.614469 TTCCAAACAGAAGAAAAATGTTGTTT 57.386 26.923 0.00 0.00 38.77 2.83
5816 6503 7.502561 AGAAAAATGTTGTTTCTAGCAGGTACT 59.497 33.333 0.00 0.00 42.22 2.73
5817 6504 7.582667 AAAATGTTGTTTCTAGCAGGTACTT 57.417 32.000 0.00 0.00 34.60 2.24
5818 6505 6.803154 AATGTTGTTTCTAGCAGGTACTTC 57.197 37.500 0.00 0.00 34.60 3.01
5819 6506 5.284861 TGTTGTTTCTAGCAGGTACTTCA 57.715 39.130 0.00 0.00 34.60 3.02
5822 6509 4.883083 TGTTTCTAGCAGGTACTTCACAG 58.117 43.478 0.00 0.00 34.60 3.66
5823 6510 4.344102 TGTTTCTAGCAGGTACTTCACAGT 59.656 41.667 0.00 0.00 34.60 3.55
5824 6511 5.163343 TGTTTCTAGCAGGTACTTCACAGTT 60.163 40.000 0.00 0.00 34.60 3.16
5825 6512 4.785511 TCTAGCAGGTACTTCACAGTTC 57.214 45.455 0.00 0.00 34.60 3.01
5826 6513 4.149598 TCTAGCAGGTACTTCACAGTTCA 58.850 43.478 0.00 0.00 34.60 3.18
5843 6544 4.212214 CAGTTCACAGTCCTAGAAGCAAAC 59.788 45.833 0.00 0.00 0.00 2.93
5846 6547 3.641436 TCACAGTCCTAGAAGCAAACTGA 59.359 43.478 7.73 0.00 39.72 3.41
5906 6608 5.741011 TCAAAGGTATGGGTACTGATTGTC 58.259 41.667 0.00 0.00 0.00 3.18
5907 6609 5.249622 TCAAAGGTATGGGTACTGATTGTCA 59.750 40.000 0.00 0.00 0.00 3.58
5908 6610 5.975988 AAGGTATGGGTACTGATTGTCAT 57.024 39.130 0.00 0.00 0.00 3.06
5909 6611 7.126573 TCAAAGGTATGGGTACTGATTGTCATA 59.873 37.037 0.00 0.00 0.00 2.15
5910 6612 7.446106 AAGGTATGGGTACTGATTGTCATAA 57.554 36.000 0.00 0.00 0.00 1.90
5911 6613 7.067496 AGGTATGGGTACTGATTGTCATAAG 57.933 40.000 0.00 0.00 0.00 1.73
5912 6614 6.615726 AGGTATGGGTACTGATTGTCATAAGT 59.384 38.462 0.00 0.00 0.00 2.24
5928 6630 9.483916 TTGTCATAAGTTATAACATATCCCACG 57.516 33.333 17.65 4.12 0.00 4.94
5930 6632 8.092687 GTCATAAGTTATAACATATCCCACGGT 58.907 37.037 17.65 0.00 0.00 4.83
5938 6640 7.921786 ATAACATATCCCACGGTATTCATTG 57.078 36.000 0.00 0.00 0.00 2.82
5946 6648 4.380444 CCCACGGTATTCATTGGTTTCAAG 60.380 45.833 0.00 0.00 36.19 3.02
5954 6656 9.396022 GGTATTCATTGGTTTCAAGATCTCTTA 57.604 33.333 0.00 0.00 36.19 2.10
5992 6694 5.875359 CCAACTAGTGTAAACCCTGAGATTC 59.125 44.000 0.00 0.00 0.00 2.52
6020 6722 0.476611 AGGAGAAGGCAAAGGGGAGT 60.477 55.000 0.00 0.00 0.00 3.85
6022 6724 1.847088 GGAGAAGGCAAAGGGGAGTAT 59.153 52.381 0.00 0.00 0.00 2.12
6070 10612 1.811266 CGGCTTCATGTCCTCCACG 60.811 63.158 0.00 0.00 0.00 4.94
6228 10771 2.044252 TTCCCGGTCTCGAGGAGG 60.044 66.667 13.56 13.03 37.17 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 461 9.965824 CAAGTTGATCCACTTTATGTTAAAACT 57.034 29.630 9.39 0.00 34.60 2.66
181 558 6.546034 TCTCAAAGTGGTCCTTTTTCTTTAGG 59.454 38.462 0.00 0.00 41.51 2.69
309 686 5.984725 TCATTGGATAAGGACGTGTACATT 58.015 37.500 0.00 0.00 0.00 2.71
455 832 3.726859 TGCTTATGGGGTAATGGAGGATT 59.273 43.478 0.00 0.00 0.00 3.01
456 833 3.335748 TGCTTATGGGGTAATGGAGGAT 58.664 45.455 0.00 0.00 0.00 3.24
458 835 3.222603 GTTGCTTATGGGGTAATGGAGG 58.777 50.000 0.00 0.00 0.00 4.30
460 837 2.091555 GGGTTGCTTATGGGGTAATGGA 60.092 50.000 0.00 0.00 0.00 3.41
461 838 2.316108 GGGTTGCTTATGGGGTAATGG 58.684 52.381 0.00 0.00 0.00 3.16
464 841 1.006162 GGTGGGTTGCTTATGGGGTAA 59.994 52.381 0.00 0.00 0.00 2.85
465 842 0.626916 GGTGGGTTGCTTATGGGGTA 59.373 55.000 0.00 0.00 0.00 3.69
466 843 1.386550 GGTGGGTTGCTTATGGGGT 59.613 57.895 0.00 0.00 0.00 4.95
467 844 0.684153 CTGGTGGGTTGCTTATGGGG 60.684 60.000 0.00 0.00 0.00 4.96
537 914 4.902443 TGCGACCTGTTACAAATTTCAA 57.098 36.364 0.00 0.00 0.00 2.69
539 916 4.616802 CACATGCGACCTGTTACAAATTTC 59.383 41.667 0.00 0.00 0.00 2.17
541 918 3.568007 ACACATGCGACCTGTTACAAATT 59.432 39.130 0.00 0.00 0.00 1.82
571 966 4.447054 TGTATGCGCAAATTTTGAAACCAG 59.553 37.500 17.11 0.00 0.00 4.00
613 1010 6.375736 CCCCCAAAACACACTTTTGTAAATTT 59.624 34.615 0.00 0.00 37.62 1.82
625 1022 3.006430 CAGGATTTACCCCCAAAACACAC 59.994 47.826 0.00 0.00 40.05 3.82
634 1031 2.755952 AATGCTCAGGATTTACCCCC 57.244 50.000 0.00 0.00 40.05 5.40
640 1037 6.616237 ATCTTTGGAAAATGCTCAGGATTT 57.384 33.333 0.00 0.00 0.00 2.17
643 1040 3.691118 CGATCTTTGGAAAATGCTCAGGA 59.309 43.478 0.00 0.00 0.00 3.86
644 1041 3.181493 CCGATCTTTGGAAAATGCTCAGG 60.181 47.826 0.00 0.00 0.00 3.86
678 1103 1.909986 TCCCATGATAACCGGAACACA 59.090 47.619 9.46 3.27 0.00 3.72
701 1126 3.762288 TGAGGTAGCTCTCATACAACGTT 59.238 43.478 21.80 0.00 38.70 3.99
702 1127 3.353557 TGAGGTAGCTCTCATACAACGT 58.646 45.455 21.80 0.00 38.70 3.99
712 1137 2.826488 ACAAGGTGATGAGGTAGCTCT 58.174 47.619 21.80 8.35 0.00 4.09
737 1162 2.078392 GAACAAAAGTATCCGGCCGAA 58.922 47.619 30.73 6.63 0.00 4.30
745 1170 7.514573 AAAACAACAACCGAACAAAAGTATC 57.485 32.000 0.00 0.00 0.00 2.24
746 1171 9.589111 AATAAAACAACAACCGAACAAAAGTAT 57.411 25.926 0.00 0.00 0.00 2.12
783 1208 3.732471 CGTCTCCCTCTCTGAATTTCGTC 60.732 52.174 0.00 0.00 0.00 4.20
784 1209 2.164624 CGTCTCCCTCTCTGAATTTCGT 59.835 50.000 0.00 0.00 0.00 3.85
799 1224 3.074412 TCTTTGGAAAATGCTCGTCTCC 58.926 45.455 0.00 0.00 0.00 3.71
804 1229 5.964887 TTTGTTTCTTTGGAAAATGCTCG 57.035 34.783 0.00 0.00 42.22 5.03
824 1270 4.775236 TGCCCTTTGTGCTTTTACATTTT 58.225 34.783 0.00 0.00 0.00 1.82
872 1322 7.256908 GGGATTTAGGGGAGCAACAGTATATTA 60.257 40.741 0.00 0.00 0.00 0.98
874 1324 5.014228 GGGATTTAGGGGAGCAACAGTATAT 59.986 44.000 0.00 0.00 0.00 0.86
875 1325 4.349930 GGGATTTAGGGGAGCAACAGTATA 59.650 45.833 0.00 0.00 0.00 1.47
909 1359 2.497675 TGGCAGAAGAGAGAAAGCGTAT 59.502 45.455 0.00 0.00 0.00 3.06
912 1362 1.462670 GTTGGCAGAAGAGAGAAAGCG 59.537 52.381 0.00 0.00 0.00 4.68
1069 1524 2.015726 GAGAGAGGGAGGGGGAGGA 61.016 68.421 0.00 0.00 0.00 3.71
1080 1541 1.836166 TCTTCTTGCCATGGAGAGAGG 59.164 52.381 18.40 16.98 0.00 3.69
1084 1545 1.632409 AGCTTCTTCTTGCCATGGAGA 59.368 47.619 18.40 7.60 0.00 3.71
1085 1546 2.125773 AGCTTCTTCTTGCCATGGAG 57.874 50.000 18.40 4.77 0.00 3.86
1087 1548 1.674962 GCTAGCTTCTTCTTGCCATGG 59.325 52.381 7.63 7.63 0.00 3.66
1088 1549 2.641305 AGCTAGCTTCTTCTTGCCATG 58.359 47.619 12.68 0.00 35.85 3.66
1089 1550 3.015327 CAAGCTAGCTTCTTCTTGCCAT 58.985 45.455 27.08 0.00 35.85 4.40
1090 1551 2.224621 ACAAGCTAGCTTCTTCTTGCCA 60.225 45.455 27.08 0.00 39.45 4.92
1106 1576 0.615850 AGGTGAGGGAAGCTACAAGC 59.384 55.000 0.00 0.00 42.84 4.01
1107 1577 1.625818 ACAGGTGAGGGAAGCTACAAG 59.374 52.381 0.00 0.00 0.00 3.16
1108 1578 1.347707 CACAGGTGAGGGAAGCTACAA 59.652 52.381 0.00 0.00 0.00 2.41
1109 1579 0.976641 CACAGGTGAGGGAAGCTACA 59.023 55.000 0.00 0.00 0.00 2.74
1110 1580 1.267121 TCACAGGTGAGGGAAGCTAC 58.733 55.000 0.00 0.00 34.14 3.58
1127 1597 3.129502 GCAGCAATGCCGCTCTCA 61.130 61.111 6.14 0.00 41.38 3.27
1128 1598 3.885521 GGCAGCAATGCCGCTCTC 61.886 66.667 13.48 0.00 45.79 3.20
1197 1667 2.043652 AGCAATCCAGCCGCCATT 60.044 55.556 0.00 0.00 34.23 3.16
1230 1700 0.249955 AGAAGCAGAAGCAGAGCCTC 59.750 55.000 0.00 0.00 45.49 4.70
1235 1705 0.668706 GACGCAGAAGCAGAAGCAGA 60.669 55.000 0.00 0.00 45.49 4.26
1236 1706 0.669932 AGACGCAGAAGCAGAAGCAG 60.670 55.000 0.00 0.00 45.49 4.24
1237 1707 0.947660 CAGACGCAGAAGCAGAAGCA 60.948 55.000 0.00 0.00 45.49 3.91
1238 1708 1.633852 CCAGACGCAGAAGCAGAAGC 61.634 60.000 0.00 0.00 42.27 3.86
1239 1709 1.018226 CCCAGACGCAGAAGCAGAAG 61.018 60.000 0.00 0.00 42.27 2.85
1240 1710 1.004560 CCCAGACGCAGAAGCAGAA 60.005 57.895 0.00 0.00 42.27 3.02
1478 1948 1.968493 GAGGGTGTGTGAGTGAGGTTA 59.032 52.381 0.00 0.00 0.00 2.85
1479 1949 0.759346 GAGGGTGTGTGAGTGAGGTT 59.241 55.000 0.00 0.00 0.00 3.50
1480 1950 0.105453 AGAGGGTGTGTGAGTGAGGT 60.105 55.000 0.00 0.00 0.00 3.85
1482 1952 1.043816 ACAGAGGGTGTGTGAGTGAG 58.956 55.000 0.00 0.00 38.28 3.51
1483 1953 1.496060 AACAGAGGGTGTGTGAGTGA 58.504 50.000 0.00 0.00 40.26 3.41
1484 1954 2.213499 GAAACAGAGGGTGTGTGAGTG 58.787 52.381 0.00 0.00 40.26 3.51
1485 1955 1.141053 GGAAACAGAGGGTGTGTGAGT 59.859 52.381 0.00 0.00 40.26 3.41
1487 1957 0.105964 CGGAAACAGAGGGTGTGTGA 59.894 55.000 0.00 0.00 40.26 3.58
1493 1963 0.178929 AGAGGACGGAAACAGAGGGT 60.179 55.000 0.00 0.00 0.00 4.34
1495 1965 0.969894 ACAGAGGACGGAAACAGAGG 59.030 55.000 0.00 0.00 0.00 3.69
1505 1975 2.354510 GAGAGTGAGATGACAGAGGACG 59.645 54.545 0.00 0.00 0.00 4.79
1514 1984 8.659491 CGATAAACAAATTTGAGAGTGAGATGA 58.341 33.333 24.64 0.00 0.00 2.92
1515 1985 8.659491 TCGATAAACAAATTTGAGAGTGAGATG 58.341 33.333 24.64 4.80 0.00 2.90
1516 1986 8.777865 TCGATAAACAAATTTGAGAGTGAGAT 57.222 30.769 24.64 6.09 0.00 2.75
1560 2031 7.641020 GCTCAAACAACAGGATTTTGAAATTTG 59.359 33.333 0.00 0.00 38.45 2.32
1567 2039 4.980434 CAGAGCTCAAACAACAGGATTTTG 59.020 41.667 17.77 0.00 0.00 2.44
1573 2045 1.311859 TGCAGAGCTCAAACAACAGG 58.688 50.000 17.77 0.00 0.00 4.00
1574 2046 3.425892 GCTATGCAGAGCTCAAACAACAG 60.426 47.826 25.63 12.34 39.50 3.16
1575 2047 2.485426 GCTATGCAGAGCTCAAACAACA 59.515 45.455 25.63 4.72 39.50 3.33
1576 2048 2.485426 TGCTATGCAGAGCTCAAACAAC 59.515 45.455 31.40 2.50 43.27 3.32
1596 2068 5.204833 CCCGCGTTCTAAACAATTCATATG 58.795 41.667 4.92 0.00 0.00 1.78
1606 2081 1.347221 CGATGCCCGCGTTCTAAAC 59.653 57.895 4.92 0.00 0.00 2.01
1642 2117 3.119280 ACCCGAAAAACAACCAAACAGAG 60.119 43.478 0.00 0.00 0.00 3.35
1690 2182 5.136105 AGGCTGTCAAAATTCCTATCCATC 58.864 41.667 0.00 0.00 0.00 3.51
1716 2208 2.885894 GTCCGTGTAATCTCCTCCCTAG 59.114 54.545 0.00 0.00 0.00 3.02
1717 2209 2.423947 GGTCCGTGTAATCTCCTCCCTA 60.424 54.545 0.00 0.00 0.00 3.53
1718 2210 1.688627 GGTCCGTGTAATCTCCTCCCT 60.689 57.143 0.00 0.00 0.00 4.20
1719 2211 0.751452 GGTCCGTGTAATCTCCTCCC 59.249 60.000 0.00 0.00 0.00 4.30
1819 2312 5.191722 TGTTGGCAGGAGGACTCTTAATTAT 59.808 40.000 0.00 0.00 0.00 1.28
1820 2313 4.534500 TGTTGGCAGGAGGACTCTTAATTA 59.466 41.667 0.00 0.00 0.00 1.40
1821 2314 3.330701 TGTTGGCAGGAGGACTCTTAATT 59.669 43.478 0.00 0.00 0.00 1.40
1822 2315 2.912956 TGTTGGCAGGAGGACTCTTAAT 59.087 45.455 0.00 0.00 0.00 1.40
1823 2316 2.334977 TGTTGGCAGGAGGACTCTTAA 58.665 47.619 0.00 0.00 0.00 1.85
1824 2317 2.024176 TGTTGGCAGGAGGACTCTTA 57.976 50.000 0.00 0.00 0.00 2.10
1825 2318 1.366319 ATGTTGGCAGGAGGACTCTT 58.634 50.000 0.00 0.00 0.00 2.85
1827 2320 1.003580 TGAATGTTGGCAGGAGGACTC 59.996 52.381 0.00 0.00 0.00 3.36
1828 2321 1.067295 TGAATGTTGGCAGGAGGACT 58.933 50.000 0.00 0.00 0.00 3.85
1829 2322 1.909700 TTGAATGTTGGCAGGAGGAC 58.090 50.000 0.00 0.00 0.00 3.85
1830 2323 2.673775 TTTGAATGTTGGCAGGAGGA 57.326 45.000 0.00 0.00 0.00 3.71
1852 2345 7.158099 AGTGCCGCTTCTCTTAATTATTTTT 57.842 32.000 0.00 0.00 0.00 1.94
1853 2346 6.183360 GGAGTGCCGCTTCTCTTAATTATTTT 60.183 38.462 13.05 0.00 0.00 1.82
1854 2347 5.297029 GGAGTGCCGCTTCTCTTAATTATTT 59.703 40.000 13.05 0.00 0.00 1.40
1855 2348 4.816925 GGAGTGCCGCTTCTCTTAATTATT 59.183 41.667 13.05 0.00 0.00 1.40
1856 2349 4.381411 GGAGTGCCGCTTCTCTTAATTAT 58.619 43.478 13.05 0.00 0.00 1.28
1857 2350 3.793559 GGAGTGCCGCTTCTCTTAATTA 58.206 45.455 13.05 0.00 0.00 1.40
1858 2351 2.633488 GGAGTGCCGCTTCTCTTAATT 58.367 47.619 13.05 0.00 0.00 1.40
1859 2352 2.317530 GGAGTGCCGCTTCTCTTAAT 57.682 50.000 13.05 0.00 0.00 1.40
1860 2353 3.834732 GGAGTGCCGCTTCTCTTAA 57.165 52.632 13.05 0.00 0.00 1.85
1871 2364 0.534203 TGTTTGGACTTCGGAGTGCC 60.534 55.000 13.41 8.96 42.97 5.01
1872 2365 0.868406 CTGTTTGGACTTCGGAGTGC 59.132 55.000 8.70 8.70 43.80 4.40
1873 2366 2.526304 TCTGTTTGGACTTCGGAGTG 57.474 50.000 0.00 0.00 35.88 3.51
1874 2367 3.771577 AATCTGTTTGGACTTCGGAGT 57.228 42.857 0.00 0.00 39.32 3.85
1875 2368 5.073311 TCTAATCTGTTTGGACTTCGGAG 57.927 43.478 0.00 0.00 0.00 4.63
1876 2369 5.677319 ATCTAATCTGTTTGGACTTCGGA 57.323 39.130 0.00 0.00 0.00 4.55
1877 2370 6.183360 GGAAATCTAATCTGTTTGGACTTCGG 60.183 42.308 1.73 0.00 33.40 4.30
1878 2371 6.371548 TGGAAATCTAATCTGTTTGGACTTCG 59.628 38.462 1.73 0.00 33.40 3.79
1879 2372 7.687941 TGGAAATCTAATCTGTTTGGACTTC 57.312 36.000 0.00 0.00 32.27 3.01
1880 2373 7.890127 TGATGGAAATCTAATCTGTTTGGACTT 59.110 33.333 0.00 0.00 0.00 3.01
1881 2374 7.405292 TGATGGAAATCTAATCTGTTTGGACT 58.595 34.615 0.00 0.00 0.00 3.85
1882 2375 7.554118 TCTGATGGAAATCTAATCTGTTTGGAC 59.446 37.037 0.00 0.00 0.00 4.02
1895 2388 8.413309 TTTTGTCATTCTTCTGATGGAAATCT 57.587 30.769 0.00 0.00 33.07 2.40
1902 2395 9.687210 TTCTGAAATTTTGTCATTCTTCTGATG 57.313 29.630 0.00 0.00 0.00 3.07
1937 2430 3.586100 ATAAATTCCGTTGCCACAACC 57.414 42.857 4.96 0.00 0.00 3.77
1943 2436 7.547722 ACCTGAAATTTAATAAATTCCGTTGCC 59.452 33.333 10.95 0.00 40.05 4.52
1961 2454 8.706322 AAGTGACCAAATTACTTACCTGAAAT 57.294 30.769 0.00 0.00 33.22 2.17
1996 2489 1.341369 CGAAACCGGAAAAATGGCGC 61.341 55.000 9.46 0.00 0.00 6.53
2118 2614 2.299013 CGTTGCCCCTGCTCTACATATA 59.701 50.000 0.00 0.00 38.71 0.86
2119 2615 1.070758 CGTTGCCCCTGCTCTACATAT 59.929 52.381 0.00 0.00 38.71 1.78
2147 2644 7.703197 ACGAAAAACAATCAACGAAAATACCTT 59.297 29.630 0.00 0.00 0.00 3.50
2191 2688 4.572389 CCATTCTCTCTCACAAAATACCCG 59.428 45.833 0.00 0.00 0.00 5.28
2196 2693 7.020827 TCTTACCCATTCTCTCTCACAAAAT 57.979 36.000 0.00 0.00 0.00 1.82
2295 2792 5.978814 AGTAGTTTAATGGTCAGTAGGCAG 58.021 41.667 0.00 0.00 0.00 4.85
2463 2968 9.964354 TTGCTACGGGTATAGATTATACTAGAA 57.036 33.333 0.00 0.00 40.61 2.10
2464 2969 9.388506 GTTGCTACGGGTATAGATTATACTAGA 57.611 37.037 0.00 0.00 40.61 2.43
2465 2970 9.393512 AGTTGCTACGGGTATAGATTATACTAG 57.606 37.037 6.29 0.00 40.61 2.57
2466 2971 9.745018 AAGTTGCTACGGGTATAGATTATACTA 57.255 33.333 6.29 0.00 40.61 1.82
2467 2972 8.647256 AAGTTGCTACGGGTATAGATTATACT 57.353 34.615 6.29 0.00 40.61 2.12
2472 2977 9.623000 AAAATTAAGTTGCTACGGGTATAGATT 57.377 29.630 0.00 0.00 0.00 2.40
2473 2978 9.269453 GAAAATTAAGTTGCTACGGGTATAGAT 57.731 33.333 0.00 0.00 0.00 1.98
2474 2979 8.259411 TGAAAATTAAGTTGCTACGGGTATAGA 58.741 33.333 0.00 0.00 0.00 1.98
2475 2980 8.428186 TGAAAATTAAGTTGCTACGGGTATAG 57.572 34.615 0.00 0.00 0.00 1.31
2476 2981 8.967664 ATGAAAATTAAGTTGCTACGGGTATA 57.032 30.769 0.00 0.00 0.00 1.47
2477 2982 7.875327 ATGAAAATTAAGTTGCTACGGGTAT 57.125 32.000 0.00 0.00 0.00 2.73
2478 2983 7.690952 AATGAAAATTAAGTTGCTACGGGTA 57.309 32.000 0.00 0.00 0.00 3.69
2479 2984 6.584185 AATGAAAATTAAGTTGCTACGGGT 57.416 33.333 0.00 0.00 0.00 5.28
2480 2985 7.883229 AAAATGAAAATTAAGTTGCTACGGG 57.117 32.000 0.00 0.00 0.00 5.28
2481 2986 7.739911 GCAAAAATGAAAATTAAGTTGCTACGG 59.260 33.333 0.00 0.00 37.67 4.02
2482 2987 7.470966 CGCAAAAATGAAAATTAAGTTGCTACG 59.529 33.333 0.00 0.00 38.33 3.51
2483 2988 7.266125 GCGCAAAAATGAAAATTAAGTTGCTAC 59.734 33.333 0.30 0.00 38.33 3.58
2484 2989 7.287229 GCGCAAAAATGAAAATTAAGTTGCTA 58.713 30.769 0.30 0.00 38.33 3.49
2485 2990 6.135400 GCGCAAAAATGAAAATTAAGTTGCT 58.865 32.000 0.30 0.00 38.33 3.91
2486 2991 5.056687 CGCGCAAAAATGAAAATTAAGTTGC 59.943 36.000 8.75 0.00 37.38 4.17
2487 2992 5.056687 GCGCGCAAAAATGAAAATTAAGTTG 59.943 36.000 29.10 0.00 0.00 3.16
2488 2993 5.136711 GCGCGCAAAAATGAAAATTAAGTT 58.863 33.333 29.10 0.00 0.00 2.66
2489 2994 4.210120 TGCGCGCAAAAATGAAAATTAAGT 59.790 33.333 34.66 0.00 0.00 2.24
2492 2997 3.490896 TGTGCGCGCAAAAATGAAAATTA 59.509 34.783 38.24 4.21 0.00 1.40
2494 2999 1.863454 TGTGCGCGCAAAAATGAAAAT 59.137 38.095 38.24 0.00 0.00 1.82
2497 3002 0.574454 GTTGTGCGCGCAAAAATGAA 59.426 45.000 36.34 13.82 0.00 2.57
2499 3004 0.111617 CAGTTGTGCGCGCAAAAATG 60.112 50.000 39.30 39.30 33.80 2.32
2524 3029 8.929487 AGGGGATTTTACACAAATTAAACTGAA 58.071 29.630 0.00 0.00 0.00 3.02
2525 3030 8.485578 AGGGGATTTTACACAAATTAAACTGA 57.514 30.769 0.00 0.00 0.00 3.41
2527 3032 8.929487 TGAAGGGGATTTTACACAAATTAAACT 58.071 29.630 0.00 0.00 0.00 2.66
2583 3088 4.202151 GGGGTCAGATTATTTTGCCATGTC 60.202 45.833 0.00 0.00 0.00 3.06
2684 3194 1.533625 TTCATGAAAGCGGAAGGTGG 58.466 50.000 5.45 0.00 43.76 4.61
2691 3201 0.526954 GGCAGCATTCATGAAAGCGG 60.527 55.000 25.04 25.04 39.69 5.52
2771 3281 1.203287 GGCTGCAAGATGGAAAGGAAC 59.797 52.381 0.50 0.00 34.07 3.62
2775 3285 2.422832 GAGAAGGCTGCAAGATGGAAAG 59.577 50.000 0.50 0.00 34.07 2.62
2781 3291 0.918310 AGGGGAGAAGGCTGCAAGAT 60.918 55.000 0.50 0.00 34.07 2.40
2946 3456 1.630244 CTGGAAGAAGGCGTTGAGCG 61.630 60.000 0.00 0.00 42.23 5.03
2971 3481 5.806366 CGATTACGGTGAAAAATTACCCT 57.194 39.130 0.00 0.00 33.32 4.34
3063 3574 8.093927 TCACCAAAAGGAAAATAAGCCAATAAG 58.906 33.333 0.00 0.00 0.00 1.73
3077 3588 3.896888 ACTGCAATCATCACCAAAAGGAA 59.103 39.130 0.00 0.00 0.00 3.36
3183 3694 2.494870 GTGGATGAAAGAGGCAGCATTT 59.505 45.455 0.00 0.00 0.00 2.32
3334 3845 8.529911 CAGGATTTCTTTCGTATCGTAAAGTAC 58.470 37.037 0.00 0.00 34.88 2.73
3389 3900 5.458779 GTCTGGGATTTCTTTTGTTCAAACG 59.541 40.000 0.00 0.00 0.00 3.60
3481 3992 6.786967 AAAGCAAAGGAGAGCATCATTAAT 57.213 33.333 0.00 0.00 37.82 1.40
3483 3994 6.209192 TGAAAAAGCAAAGGAGAGCATCATTA 59.791 34.615 0.00 0.00 37.82 1.90
3533 4044 7.295340 AGTTCAGGGTATTTCCTAAAAGTGTT 58.705 34.615 0.00 0.00 34.92 3.32
3662 4174 2.358737 GTCCCAACTCCACTGCCG 60.359 66.667 0.00 0.00 0.00 5.69
3729 4241 2.851263 TGGTAGGCTTTGTCAACGAT 57.149 45.000 0.00 0.00 0.00 3.73
3891 4403 2.202388 GTCGAATCGACGGTGCGA 60.202 61.111 20.24 7.21 46.56 5.10
4103 4615 1.574428 GTGGCCACTGTTGTAAGCG 59.426 57.895 29.12 0.00 0.00 4.68
4151 4663 9.837525 CTGATCATTTTCTTTTCTTACCAGAAG 57.162 33.333 0.00 0.00 40.28 2.85
4162 4674 7.495055 ACTTCAACTGCTGATCATTTTCTTTT 58.505 30.769 0.00 0.00 32.78 2.27
4163 4675 7.047460 ACTTCAACTGCTGATCATTTTCTTT 57.953 32.000 0.00 0.00 32.78 2.52
4239 4759 1.123077 CATCCCGAGTTGATCCAGGA 58.877 55.000 0.00 0.00 32.76 3.86
4285 4805 0.249573 CAACCAAGGTTTGCCTGCAG 60.250 55.000 6.78 6.78 46.33 4.41
4312 4832 2.290260 TGTTGTGTTGAGGAGGCCATAG 60.290 50.000 5.01 0.00 0.00 2.23
4321 4841 4.566360 GGTTCAAATGTTGTTGTGTTGAGG 59.434 41.667 0.00 0.00 30.43 3.86
4469 4989 4.031028 GTGTGATGATTTTAGACATGCGC 58.969 43.478 0.00 0.00 0.00 6.09
4470 4990 5.475273 AGTGTGATGATTTTAGACATGCG 57.525 39.130 0.00 0.00 0.00 4.73
4487 5007 6.542005 TGTGGTGCCATATTCTAATAAGTGTG 59.458 38.462 0.00 0.00 0.00 3.82
4502 5022 4.263727 TGGAAACTAAGTATGTGGTGCCAT 60.264 41.667 0.00 0.00 0.00 4.40
4579 5099 5.066893 GCAGGAATAAGTTGCATGAAGATGA 59.933 40.000 0.00 0.00 37.75 2.92
4697 5217 0.641783 CCGAATCTTTTGCGCAATGC 59.358 50.000 25.64 6.51 46.70 3.56
4797 5319 2.578021 TCCTGGAAAATTCAGAGAGGGG 59.422 50.000 0.00 0.00 34.36 4.79
4798 5320 4.268359 CTTCCTGGAAAATTCAGAGAGGG 58.732 47.826 10.86 0.00 34.36 4.30
4799 5321 4.268359 CCTTCCTGGAAAATTCAGAGAGG 58.732 47.826 10.86 0.00 38.35 3.69
4915 5437 0.183492 ACCTTCTGTGCTCCTTTGCA 59.817 50.000 0.00 0.00 41.05 4.08
4951 5473 0.467290 TTGTGAGCCCAGGTGTTTCC 60.467 55.000 0.00 0.00 0.00 3.13
4958 5480 2.360852 CTGCCTTGTGAGCCCAGG 60.361 66.667 0.00 0.00 0.00 4.45
5020 5542 3.179048 CACATTGTCATTGAGCAGCATG 58.821 45.455 0.00 0.00 40.87 4.06
5034 5556 2.985282 CGGTGGCCAGCACATTGT 60.985 61.111 32.71 0.00 0.00 2.71
5050 5572 2.440796 ATGGCTCCATTGGCACCG 60.441 61.111 0.00 0.00 45.12 4.94
5118 5640 2.352715 GCAAACACAATGGAGTAAGGGC 60.353 50.000 0.00 0.00 0.00 5.19
5134 5656 4.725790 AAAGCCTGGAATATGAGCAAAC 57.274 40.909 0.00 0.00 0.00 2.93
5237 5760 3.689224 CATGCTTTGCTTCTCACCG 57.311 52.632 0.00 0.00 0.00 4.94
5299 5822 7.621832 TCGTTTCATGAAAACAATGATGAAC 57.378 32.000 22.07 5.53 46.33 3.18
5383 5908 9.354673 AGAATGACAGAGGTATGAAAAGAAAAA 57.645 29.630 0.00 0.00 0.00 1.94
5384 5909 8.786898 CAGAATGACAGAGGTATGAAAAGAAAA 58.213 33.333 0.00 0.00 39.69 2.29
5385 5910 7.939039 ACAGAATGACAGAGGTATGAAAAGAAA 59.061 33.333 0.00 0.00 39.69 2.52
5390 5915 8.463930 AAAAACAGAATGACAGAGGTATGAAA 57.536 30.769 0.00 0.00 39.69 2.69
5399 5924 8.450578 AGTGTCAATAAAAACAGAATGACAGA 57.549 30.769 6.65 0.00 45.33 3.41
5425 5950 8.426489 AGGAGCTATGTGTTCGGTATTTATAAA 58.574 33.333 0.00 0.00 0.00 1.40
5433 5958 4.546829 AAAAGGAGCTATGTGTTCGGTA 57.453 40.909 0.00 0.00 0.00 4.02
5468 5993 8.737168 TCATATACTGAAAGCAGCTTAAATGT 57.263 30.769 8.45 7.99 46.26 2.71
5528 6215 2.009774 AGAAAATGCACGGGAGAATCG 58.990 47.619 0.00 0.00 34.37 3.34
5657 6344 2.046313 CTTTTCATGTTCTGCACGTGC 58.954 47.619 33.11 33.11 41.66 5.34
5743 6430 5.549347 TGTTGGTAAAGGCGACTGTAATAA 58.451 37.500 0.00 0.00 42.68 1.40
5753 6440 4.876107 AGATGTTCTATGTTGGTAAAGGCG 59.124 41.667 0.00 0.00 0.00 5.52
5773 6460 9.136323 ACATTTTTCTTCTGTTTGGAAGTAGAT 57.864 29.630 0.00 0.00 42.19 1.98
5780 6467 8.093927 AGAAACAACATTTTTCTTCTGTTTGGA 58.906 29.630 2.96 0.00 39.77 3.53
5781 6468 8.255394 AGAAACAACATTTTTCTTCTGTTTGG 57.745 30.769 2.96 0.00 39.77 3.28
5804 6491 4.022242 GTGAACTGTGAAGTACCTGCTAGA 60.022 45.833 0.00 0.00 0.00 2.43
5816 6503 4.501571 GCTTCTAGGACTGTGAACTGTGAA 60.502 45.833 0.00 0.00 0.00 3.18
5817 6504 3.005897 GCTTCTAGGACTGTGAACTGTGA 59.994 47.826 0.00 0.00 0.00 3.58
5818 6505 3.243873 TGCTTCTAGGACTGTGAACTGTG 60.244 47.826 0.00 0.00 0.00 3.66
5819 6506 2.965831 TGCTTCTAGGACTGTGAACTGT 59.034 45.455 0.00 0.00 0.00 3.55
5822 6509 4.212214 CAGTTTGCTTCTAGGACTGTGAAC 59.788 45.833 0.00 0.00 34.51 3.18
5823 6510 4.100963 TCAGTTTGCTTCTAGGACTGTGAA 59.899 41.667 0.00 0.00 38.95 3.18
5824 6511 3.641436 TCAGTTTGCTTCTAGGACTGTGA 59.359 43.478 0.00 0.00 38.95 3.58
5825 6512 3.995199 TCAGTTTGCTTCTAGGACTGTG 58.005 45.455 0.00 0.00 38.95 3.66
5826 6513 4.899352 ATCAGTTTGCTTCTAGGACTGT 57.101 40.909 0.00 0.00 38.95 3.55
5843 6544 5.990120 ACAGGGGAATCTTGAAAAATCAG 57.010 39.130 0.00 0.00 0.00 2.90
5846 6547 5.154418 TGGAACAGGGGAATCTTGAAAAAT 58.846 37.500 0.00 0.00 0.00 1.82
5909 6611 8.653191 TGAATACCGTGGGATATGTTATAACTT 58.347 33.333 16.33 12.42 0.00 2.66
5910 6612 8.197592 TGAATACCGTGGGATATGTTATAACT 57.802 34.615 16.33 5.22 0.00 2.24
5911 6613 9.444600 AATGAATACCGTGGGATATGTTATAAC 57.555 33.333 8.75 8.75 0.00 1.89
5912 6614 9.443323 CAATGAATACCGTGGGATATGTTATAA 57.557 33.333 0.00 0.00 0.00 0.98
5924 6626 4.457603 TCTTGAAACCAATGAATACCGTGG 59.542 41.667 0.00 0.00 0.00 4.94
5925 6627 5.621197 TCTTGAAACCAATGAATACCGTG 57.379 39.130 0.00 0.00 0.00 4.94
5926 6628 6.180472 AGATCTTGAAACCAATGAATACCGT 58.820 36.000 0.00 0.00 0.00 4.83
5928 6630 7.872113 AGAGATCTTGAAACCAATGAATACC 57.128 36.000 0.00 0.00 0.00 2.73
5958 6660 8.727910 GGGTTTACACTAGTTGGAAATTAAGAG 58.272 37.037 0.00 0.00 40.35 2.85
5963 6665 6.607019 TCAGGGTTTACACTAGTTGGAAATT 58.393 36.000 0.00 0.00 40.35 1.82
5992 6694 0.179020 TGCCTTCTCCTTGTGTGTGG 60.179 55.000 0.00 0.00 0.00 4.17
6020 6722 1.066422 CTCTGCTCCGCTTCGCATA 59.934 57.895 0.00 0.00 35.32 3.14
6100 10642 1.220749 CTTCGGGCCGATGAAGGAA 59.779 57.895 31.45 14.46 38.31 3.36
6312 10855 1.065109 CGTCCGGTGCGACATCATA 59.935 57.895 14.16 0.00 32.74 2.15
6314 10857 4.429212 CCGTCCGGTGCGACATCA 62.429 66.667 19.39 0.00 32.74 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.