Multiple sequence alignment - TraesCS6B01G402400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G402400 chr6B 100.000 6822 0 0 1 6822 678660021 678666842 0.000000e+00 12598.0
1 TraesCS6B01G402400 chr6B 88.889 405 36 6 1744 2140 602953112 602952709 2.210000e-134 490.0
2 TraesCS6B01G402400 chr6B 92.784 97 7 0 5150 5246 215729326 215729230 2.570000e-29 141.0
3 TraesCS6B01G402400 chr6D 95.033 2557 91 12 2143 4674 447841449 447843994 0.000000e+00 3986.0
4 TraesCS6B01G402400 chr6D 91.622 1683 92 20 4718 6387 447844001 447845647 0.000000e+00 2281.0
5 TraesCS6B01G402400 chr6D 89.195 870 37 24 904 1740 447840613 447841458 0.000000e+00 1033.0
6 TraesCS6B01G402400 chr6D 91.753 97 8 0 5150 5246 124523361 124523265 1.190000e-27 135.0
7 TraesCS6B01G402400 chr6D 91.753 97 8 0 5150 5246 168761727 168761631 1.190000e-27 135.0
8 TraesCS6B01G402400 chr6D 93.103 58 2 1 5246 5301 283191089 283191146 4.380000e-12 84.2
9 TraesCS6B01G402400 chr6D 75.000 176 44 0 376 551 47203841 47203666 1.580000e-11 82.4
10 TraesCS6B01G402400 chr6D 93.750 48 3 0 1335 1382 251262364 251262317 9.490000e-09 73.1
11 TraesCS6B01G402400 chr6A 94.854 2565 89 14 2148 4674 594430676 594433235 0.000000e+00 3965.0
12 TraesCS6B01G402400 chr6A 92.742 1557 77 12 4718 6257 594433242 594434779 0.000000e+00 2217.0
13 TraesCS6B01G402400 chr6A 92.447 609 23 12 904 1495 594429998 594430600 0.000000e+00 848.0
14 TraesCS6B01G402400 chr6A 88.099 605 51 10 6227 6822 594434776 594435368 0.000000e+00 699.0
15 TraesCS6B01G402400 chr6A 94.203 69 4 0 1605 1673 594430604 594430672 9.360000e-19 106.0
16 TraesCS6B01G402400 chr4A 92.090 847 58 8 1 841 136885004 136885847 0.000000e+00 1184.0
17 TraesCS6B01G402400 chrUn 89.822 845 73 8 1 841 326739872 326740707 0.000000e+00 1072.0
18 TraesCS6B01G402400 chrUn 89.704 845 74 8 1 841 326742911 326743746 0.000000e+00 1066.0
19 TraesCS6B01G402400 chr3B 95.556 405 14 3 1741 2141 327849617 327849213 0.000000e+00 645.0
20 TraesCS6B01G402400 chr3B 95.455 44 2 0 4677 4720 732827319 732827276 3.410000e-08 71.3
21 TraesCS6B01G402400 chr7B 94.132 409 19 3 1739 2143 91952509 91952102 9.720000e-173 617.0
22 TraesCS6B01G402400 chr7B 95.349 43 2 0 4677 4719 698212652 698212694 1.230000e-07 69.4
23 TraesCS6B01G402400 chr4B 92.383 407 23 5 1741 2142 373064039 373063636 2.130000e-159 573.0
24 TraesCS6B01G402400 chr4B 87.224 407 45 7 1740 2140 373928872 373928467 2.240000e-124 457.0
25 TraesCS6B01G402400 chr4B 90.769 65 3 2 5240 5301 495534110 495534046 4.380000e-12 84.2
26 TraesCS6B01G402400 chr1B 89.120 432 35 10 1734 2155 530005660 530005231 1.690000e-145 527.0
27 TraesCS6B01G402400 chr1B 95.349 43 2 0 4677 4719 171199937 171199895 1.230000e-07 69.4
28 TraesCS6B01G402400 chr1B 95.238 42 2 0 4679 4720 159061439 159061480 4.420000e-07 67.6
29 TraesCS6B01G402400 chr1B 95.122 41 2 0 4679 4719 370044465 370044505 1.590000e-06 65.8
30 TraesCS6B01G402400 chr5B 89.176 425 36 7 1741 2157 272587051 272586629 7.840000e-144 521.0
31 TraesCS6B01G402400 chr5B 92.000 100 8 0 5147 5246 567275582 567275681 2.570000e-29 141.0
32 TraesCS6B01G402400 chr5B 85.714 112 9 6 3080 3190 672579911 672579806 2.010000e-20 111.0
33 TraesCS6B01G402400 chr2A 87.654 405 45 3 1741 2140 703640298 703639894 3.730000e-127 466.0
34 TraesCS6B01G402400 chr2A 94.444 54 3 0 1325 1378 690923770 690923823 4.380000e-12 84.2
35 TraesCS6B01G402400 chr2A 95.238 42 1 1 4679 4720 747263451 747263411 1.590000e-06 65.8
36 TraesCS6B01G402400 chr3D 87.105 411 44 6 1740 2142 149850391 149850800 2.240000e-124 457.0
37 TraesCS6B01G402400 chr3D 95.349 43 2 0 4677 4719 25199389 25199347 1.230000e-07 69.4
38 TraesCS6B01G402400 chr3D 93.182 44 3 0 4684 4727 610347026 610346983 1.590000e-06 65.8
39 TraesCS6B01G402400 chr1D 92.000 100 8 0 5147 5246 43222136 43222235 2.570000e-29 141.0
40 TraesCS6B01G402400 chr1D 93.103 58 2 1 5246 5301 212432546 212432603 4.380000e-12 84.2
41 TraesCS6B01G402400 chr1D 93.103 58 2 1 5246 5301 351027492 351027435 4.380000e-12 84.2
42 TraesCS6B01G402400 chr7D 91.089 101 9 0 5146 5246 626691991 626692091 3.320000e-28 137.0
43 TraesCS6B01G402400 chr4D 91.089 101 9 0 5146 5246 241078973 241078873 3.320000e-28 137.0
44 TraesCS6B01G402400 chr4D 93.103 58 2 1 5246 5301 123692639 123692696 4.380000e-12 84.2
45 TraesCS6B01G402400 chr4D 93.103 58 2 1 5246 5301 173486424 173486481 4.380000e-12 84.2
46 TraesCS6B01G402400 chr4D 93.103 58 2 1 5246 5301 241057352 241057409 4.380000e-12 84.2
47 TraesCS6B01G402400 chr2B 93.103 58 4 0 1325 1382 655016957 655016900 1.220000e-12 86.1
48 TraesCS6B01G402400 chr2B 80.769 78 12 3 4677 4752 107082390 107082466 2.660000e-04 58.4
49 TraesCS6B01G402400 chr2D 94.444 54 3 0 1325 1378 548086422 548086369 4.380000e-12 84.2
50 TraesCS6B01G402400 chr5A 73.034 178 48 0 376 553 123441387 123441210 5.710000e-06 63.9
51 TraesCS6B01G402400 chr5A 96.970 33 1 0 18 50 285333731 285333763 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G402400 chr6B 678660021 678666842 6821 False 12598.000000 12598 100.000 1 6822 1 chr6B.!!$F1 6821
1 TraesCS6B01G402400 chr6D 447840613 447845647 5034 False 2433.333333 3986 91.950 904 6387 3 chr6D.!!$F2 5483
2 TraesCS6B01G402400 chr6A 594429998 594435368 5370 False 1567.000000 3965 92.469 904 6822 5 chr6A.!!$F1 5918
3 TraesCS6B01G402400 chr4A 136885004 136885847 843 False 1184.000000 1184 92.090 1 841 1 chr4A.!!$F1 840
4 TraesCS6B01G402400 chrUn 326739872 326743746 3874 False 1069.000000 1072 89.763 1 841 2 chrUn.!!$F1 840

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
871 3914 0.036010 ACTGCAAAGCTCCGTATGCT 60.036 50.0 8.99 0.00 43.32 3.79 F
2110 5201 0.037590 TAGAAATTGGGGCTGTGCGT 59.962 50.0 0.00 0.00 0.00 5.24 F
2111 5202 0.037590 AGAAATTGGGGCTGTGCGTA 59.962 50.0 0.00 0.00 0.00 4.42 F
2745 5844 0.321298 ATGGTTCGTTAGTTGCCGCT 60.321 50.0 0.00 0.00 0.00 5.52 F
4255 7364 0.874390 CACTAAACAGTGCACGCCAT 59.126 50.0 12.01 2.28 32.72 4.40 F
5248 8411 0.398696 ATCCACGCCAACAACCACTA 59.601 50.0 0.00 0.00 0.00 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2745 5844 0.035881 CCTCAGCTCCAGCAGTTTGA 59.964 55.000 0.48 0.00 45.16 2.69 R
4094 7201 3.392947 TCCCAAAGAGTACATGTCCACAA 59.607 43.478 0.00 0.00 0.00 3.33 R
4130 7238 8.492415 TTACAAGTATATCAGGAGGCATAAGT 57.508 34.615 0.00 0.00 0.00 2.24 R
4417 7548 1.064505 GCATGGTCATGGTCATGTTCG 59.935 52.381 21.50 5.85 41.83 3.95 R
5734 8906 0.168788 CAATCTTGTTGATGCGCGGT 59.831 50.000 8.83 0.00 35.21 5.68 R
6680 9889 0.249868 TTGAGGTGAGCAGACAACGG 60.250 55.000 0.00 0.00 32.17 4.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
120 121 2.573341 TAGCGAGACGGCGTTCTTCG 62.573 60.000 26.70 26.70 43.12 3.79
128 129 1.866925 GGCGTTCTTCGGAGGTTTG 59.133 57.895 0.00 0.00 40.26 2.93
149 150 3.843619 TGGTCACATCAATCTTCACCCTA 59.156 43.478 0.00 0.00 0.00 3.53
176 177 3.829026 GAGCAAAGTTCCCCTCAAAATCT 59.171 43.478 0.00 0.00 0.00 2.40
205 3244 1.687123 AGGCTCGGCGTATATGAACTT 59.313 47.619 6.85 0.00 0.00 2.66
287 3326 3.058450 CTGCATCCAGATGTCGATCTTC 58.942 50.000 9.29 0.00 41.77 2.87
323 3362 4.814771 GTGGAGGGTTTAGTAATTCCATCG 59.185 45.833 10.81 0.00 37.10 3.84
358 3398 3.430236 CCACCGCTTTTCCTTTGAAAGTT 60.430 43.478 4.02 0.00 41.31 2.66
394 3434 1.609635 TTACTCGCTCCCAATCGCCA 61.610 55.000 0.00 0.00 0.00 5.69
430 3470 5.815581 TGCAGGGTGTACATATTTTCTTCT 58.184 37.500 0.00 0.00 0.00 2.85
432 3472 7.398829 TGCAGGGTGTACATATTTTCTTCTAA 58.601 34.615 0.00 0.00 0.00 2.10
467 3507 1.694150 CTTCCTTCGCCAGATCCCATA 59.306 52.381 0.00 0.00 0.00 2.74
475 3515 2.804572 CGCCAGATCCCATACAACTCTG 60.805 54.545 0.00 0.00 34.48 3.35
513 3553 5.112686 CCAATACTGGCTGTAAGTCTTCTC 58.887 45.833 8.36 0.00 41.06 2.87
559 3599 4.717629 CGCGTTGCCTCGACAGGA 62.718 66.667 0.00 0.00 43.65 3.86
606 3646 3.117322 TCCTGTAGATCCTCCTCCTTCAG 60.117 52.174 0.00 0.00 0.00 3.02
617 3658 2.235650 TCCTCCTTCAGACAAGCTCATG 59.764 50.000 0.00 0.00 0.00 3.07
642 3683 1.662517 TTGCTTCAAGTTCAGTCGCA 58.337 45.000 0.00 0.00 0.00 5.10
647 3688 0.939577 TCAAGTTCAGTCGCAGTCGC 60.940 55.000 0.00 0.00 35.26 5.19
679 3720 0.179023 TGCGCCATCATCCATGCTTA 60.179 50.000 4.18 0.00 0.00 3.09
694 3735 2.108168 TGCTTATCTTGCCCGTAGAGT 58.892 47.619 0.00 0.00 0.00 3.24
702 3743 2.217510 TGCCCGTAGAGTTCTCTTCT 57.782 50.000 7.66 0.00 0.00 2.85
738 3779 2.036890 AACGTACCTCCCGAGCCT 59.963 61.111 0.00 0.00 0.00 4.58
751 3792 3.781770 GAGCCTGCCATCGTCGAGG 62.782 68.421 0.00 0.00 0.00 4.63
778 3820 2.050350 CCCTGACTACCGGCGAGAA 61.050 63.158 9.30 0.00 0.00 2.87
857 3900 5.401531 AAAAACTACGAGGATCTACTGCA 57.598 39.130 0.00 0.00 0.00 4.41
858 3901 5.401531 AAAACTACGAGGATCTACTGCAA 57.598 39.130 0.00 0.00 0.00 4.08
859 3902 5.401531 AAACTACGAGGATCTACTGCAAA 57.598 39.130 0.00 0.00 0.00 3.68
860 3903 4.640789 ACTACGAGGATCTACTGCAAAG 57.359 45.455 0.00 0.00 0.00 2.77
861 3904 2.301577 ACGAGGATCTACTGCAAAGC 57.698 50.000 0.00 0.00 0.00 3.51
862 3905 1.827969 ACGAGGATCTACTGCAAAGCT 59.172 47.619 0.00 0.00 0.00 3.74
863 3906 2.159170 ACGAGGATCTACTGCAAAGCTC 60.159 50.000 0.00 0.00 0.00 4.09
864 3907 2.801342 CGAGGATCTACTGCAAAGCTCC 60.801 54.545 9.56 9.56 30.81 4.70
865 3908 1.137872 AGGATCTACTGCAAAGCTCCG 59.862 52.381 11.13 0.00 34.99 4.63
866 3909 1.134670 GGATCTACTGCAAAGCTCCGT 60.135 52.381 3.57 0.00 0.00 4.69
867 3910 2.100916 GGATCTACTGCAAAGCTCCGTA 59.899 50.000 3.57 0.00 0.00 4.02
868 3911 3.243907 GGATCTACTGCAAAGCTCCGTAT 60.244 47.826 3.57 0.00 0.00 3.06
869 3912 3.165058 TCTACTGCAAAGCTCCGTATG 57.835 47.619 0.00 0.00 0.00 2.39
870 3913 1.594862 CTACTGCAAAGCTCCGTATGC 59.405 52.381 0.00 0.00 39.22 3.14
871 3914 0.036010 ACTGCAAAGCTCCGTATGCT 60.036 50.000 8.99 0.00 43.32 3.79
872 3915 0.654683 CTGCAAAGCTCCGTATGCTC 59.345 55.000 8.99 0.00 40.22 4.26
873 3916 0.744414 TGCAAAGCTCCGTATGCTCC 60.744 55.000 8.99 0.00 40.22 4.70
874 3917 1.766143 GCAAAGCTCCGTATGCTCCG 61.766 60.000 0.00 0.00 40.22 4.63
875 3918 1.144057 AAAGCTCCGTATGCTCCGG 59.856 57.895 0.00 0.00 46.83 5.14
876 3919 1.614241 AAAGCTCCGTATGCTCCGGT 61.614 55.000 0.00 0.00 45.63 5.28
877 3920 0.754217 AAGCTCCGTATGCTCCGGTA 60.754 55.000 0.00 0.00 45.63 4.02
878 3921 1.173444 AGCTCCGTATGCTCCGGTAG 61.173 60.000 0.00 0.00 45.63 3.18
902 3945 3.703127 GACTCCGAACGGGCCCTT 61.703 66.667 22.43 7.92 34.94 3.95
930 3973 4.143333 CCCGTTCGCTCGACCCAT 62.143 66.667 0.00 0.00 0.00 4.00
949 3992 4.443315 CCCATTTTCAAGTAATGGCCCATC 60.443 45.833 0.00 0.00 46.94 3.51
962 4005 2.603008 CCATCCCCAAATCCGGCT 59.397 61.111 0.00 0.00 0.00 5.52
1051 4096 1.485066 GTCCGTCCCACAATATCCACT 59.515 52.381 0.00 0.00 0.00 4.00
1434 4493 3.849951 CCTACCATGCGCCCGAGT 61.850 66.667 4.18 0.00 0.00 4.18
1445 4504 1.220529 CGCCCGAGTCGTGTAGTATA 58.779 55.000 12.31 0.00 0.00 1.47
1480 4539 4.291047 AGCGATGCTGGACACTTG 57.709 55.556 0.00 0.00 37.57 3.16
1483 4542 0.593128 GCGATGCTGGACACTTGTTT 59.407 50.000 0.00 0.00 0.00 2.83
1484 4543 1.001378 GCGATGCTGGACACTTGTTTT 60.001 47.619 0.00 0.00 0.00 2.43
1485 4544 2.653890 CGATGCTGGACACTTGTTTTG 58.346 47.619 0.00 0.00 0.00 2.44
1486 4545 2.397549 GATGCTGGACACTTGTTTTGC 58.602 47.619 0.00 0.00 0.00 3.68
1505 4591 9.019656 TGTTTTGCTAGATTACCATATTGTTGT 57.980 29.630 0.00 0.00 0.00 3.32
1518 4604 5.333035 CCATATTGTTGTGTATCCGCGTTAG 60.333 44.000 4.92 0.00 0.00 2.34
1531 4617 1.657094 CGCGTTAGTGGATTGTGGTAC 59.343 52.381 0.00 0.00 0.00 3.34
1571 4657 1.976132 GCACCTAGCCAGCATCAGGA 61.976 60.000 10.76 0.00 37.23 3.86
1603 4689 3.320541 CCTTGAGATAGTTCGCTCTGGAT 59.679 47.826 0.00 0.00 31.79 3.41
1632 4719 4.838423 TCATCTGGACTGTGAGGTTTAGAA 59.162 41.667 0.00 0.00 0.00 2.10
1675 4762 6.205076 CACTAGGACTAATCGTGTAGCTATGT 59.795 42.308 0.00 0.00 0.00 2.29
1682 4769 4.665833 ATCGTGTAGCTATGTGCCTTTA 57.334 40.909 0.00 0.00 44.23 1.85
1740 4831 7.276218 CCAAATGTGCCAATCATTGTTAGTAAG 59.724 37.037 0.00 0.00 35.95 2.34
1741 4832 7.701539 AATGTGCCAATCATTGTTAGTAAGA 57.298 32.000 0.00 0.00 34.74 2.10
1742 4833 6.741992 TGTGCCAATCATTGTTAGTAAGAG 57.258 37.500 0.00 0.00 0.00 2.85
1743 4834 6.472016 TGTGCCAATCATTGTTAGTAAGAGA 58.528 36.000 0.00 0.00 0.00 3.10
1744 4835 6.595326 TGTGCCAATCATTGTTAGTAAGAGAG 59.405 38.462 0.00 0.00 0.00 3.20
1745 4836 6.037610 GTGCCAATCATTGTTAGTAAGAGAGG 59.962 42.308 0.00 0.00 0.00 3.69
1746 4837 5.008118 GCCAATCATTGTTAGTAAGAGAGGC 59.992 44.000 0.00 0.00 0.00 4.70
1747 4838 5.235186 CCAATCATTGTTAGTAAGAGAGGCG 59.765 44.000 0.00 0.00 0.00 5.52
1748 4839 5.854010 ATCATTGTTAGTAAGAGAGGCGA 57.146 39.130 0.00 0.00 0.00 5.54
1749 4840 5.854010 TCATTGTTAGTAAGAGAGGCGAT 57.146 39.130 0.00 0.00 0.00 4.58
1750 4841 6.222038 TCATTGTTAGTAAGAGAGGCGATT 57.778 37.500 0.00 0.00 0.00 3.34
1751 4842 6.640518 TCATTGTTAGTAAGAGAGGCGATTT 58.359 36.000 0.00 0.00 0.00 2.17
1752 4843 6.757010 TCATTGTTAGTAAGAGAGGCGATTTC 59.243 38.462 0.00 0.00 0.00 2.17
1753 4844 5.007385 TGTTAGTAAGAGAGGCGATTTCC 57.993 43.478 0.00 0.00 0.00 3.13
1754 4845 4.710375 TGTTAGTAAGAGAGGCGATTTCCT 59.290 41.667 0.00 0.00 39.67 3.36
1755 4846 5.889853 TGTTAGTAAGAGAGGCGATTTCCTA 59.110 40.000 0.00 0.00 36.38 2.94
1756 4847 6.550108 TGTTAGTAAGAGAGGCGATTTCCTAT 59.450 38.462 0.00 0.00 36.38 2.57
1757 4848 5.461032 AGTAAGAGAGGCGATTTCCTATG 57.539 43.478 0.00 0.00 36.38 2.23
1758 4849 2.829741 AGAGAGGCGATTTCCTATGC 57.170 50.000 0.00 0.00 36.38 3.14
1759 4850 2.042464 AGAGAGGCGATTTCCTATGCA 58.958 47.619 0.00 0.00 36.38 3.96
1760 4851 2.636893 AGAGAGGCGATTTCCTATGCAT 59.363 45.455 3.79 3.79 36.38 3.96
1761 4852 2.740981 GAGAGGCGATTTCCTATGCATG 59.259 50.000 10.16 0.00 36.38 4.06
1762 4853 1.808945 GAGGCGATTTCCTATGCATGG 59.191 52.381 10.16 6.20 36.38 3.66
1763 4854 1.143684 AGGCGATTTCCTATGCATGGT 59.856 47.619 10.16 0.00 33.95 3.55
1764 4855 1.267806 GGCGATTTCCTATGCATGGTG 59.732 52.381 10.16 0.60 0.00 4.17
1765 4856 1.267806 GCGATTTCCTATGCATGGTGG 59.732 52.381 10.16 9.07 0.00 4.61
1766 4857 2.575532 CGATTTCCTATGCATGGTGGT 58.424 47.619 10.16 0.00 0.00 4.16
1767 4858 3.738982 CGATTTCCTATGCATGGTGGTA 58.261 45.455 10.16 0.01 0.00 3.25
1768 4859 3.748048 CGATTTCCTATGCATGGTGGTAG 59.252 47.826 10.16 0.00 0.00 3.18
1769 4860 2.638480 TTCCTATGCATGGTGGTAGC 57.362 50.000 10.16 0.00 0.00 3.58
1770 4861 1.806496 TCCTATGCATGGTGGTAGCT 58.194 50.000 10.16 0.00 0.00 3.32
1771 4862 2.970987 TCCTATGCATGGTGGTAGCTA 58.029 47.619 10.16 0.00 0.00 3.32
1772 4863 2.632996 TCCTATGCATGGTGGTAGCTAC 59.367 50.000 15.88 15.88 0.00 3.58
1773 4864 2.610479 CCTATGCATGGTGGTAGCTACG 60.610 54.545 17.48 3.95 0.00 3.51
1774 4865 0.106708 ATGCATGGTGGTAGCTACGG 59.893 55.000 17.48 4.25 0.00 4.02
1775 4866 0.973496 TGCATGGTGGTAGCTACGGA 60.973 55.000 17.48 3.99 0.00 4.69
1776 4867 0.529992 GCATGGTGGTAGCTACGGAC 60.530 60.000 17.48 15.34 0.00 4.79
1777 4868 0.248907 CATGGTGGTAGCTACGGACG 60.249 60.000 17.48 0.53 0.00 4.79
1778 4869 2.012902 ATGGTGGTAGCTACGGACGC 62.013 60.000 17.48 10.22 0.00 5.19
1779 4870 2.703798 GGTGGTAGCTACGGACGCA 61.704 63.158 17.48 6.73 0.00 5.24
1780 4871 1.436336 GTGGTAGCTACGGACGCAT 59.564 57.895 17.48 0.00 0.00 4.73
1781 4872 0.870307 GTGGTAGCTACGGACGCATG 60.870 60.000 17.48 0.00 0.00 4.06
1782 4873 1.299926 GGTAGCTACGGACGCATGG 60.300 63.158 17.48 0.00 0.00 3.66
1783 4874 1.436336 GTAGCTACGGACGCATGGT 59.564 57.895 8.40 0.00 0.00 3.55
1784 4875 0.870307 GTAGCTACGGACGCATGGTG 60.870 60.000 8.40 0.00 0.00 4.17
1785 4876 2.011741 TAGCTACGGACGCATGGTGG 62.012 60.000 0.00 0.00 0.00 4.61
1786 4877 2.890474 CTACGGACGCATGGTGGC 60.890 66.667 0.00 0.00 0.00 5.01
1795 4886 3.434319 CATGGTGGCGGCTCACAC 61.434 66.667 11.43 10.57 39.27 3.82
1799 4890 4.643387 GTGGCGGCTCACACCCTT 62.643 66.667 11.43 0.00 37.57 3.95
1800 4891 3.884774 TGGCGGCTCACACCCTTT 61.885 61.111 11.43 0.00 0.00 3.11
1801 4892 3.365265 GGCGGCTCACACCCTTTG 61.365 66.667 0.00 0.00 0.00 2.77
1802 4893 3.365265 GCGGCTCACACCCTTTGG 61.365 66.667 0.00 0.00 37.80 3.28
1803 4894 3.365265 CGGCTCACACCCTTTGGC 61.365 66.667 0.00 0.00 33.59 4.52
1804 4895 2.203480 GGCTCACACCCTTTGGCA 60.203 61.111 0.00 0.00 33.59 4.92
1805 4896 1.607467 GGCTCACACCCTTTGGCAT 60.607 57.895 0.00 0.00 33.59 4.40
1806 4897 0.323360 GGCTCACACCCTTTGGCATA 60.323 55.000 0.00 0.00 33.59 3.14
1807 4898 1.544724 GCTCACACCCTTTGGCATAA 58.455 50.000 0.00 0.00 33.59 1.90
1808 4899 1.474077 GCTCACACCCTTTGGCATAAG 59.526 52.381 0.00 0.00 33.59 1.73
1809 4900 2.795329 CTCACACCCTTTGGCATAAGT 58.205 47.619 0.00 0.00 33.59 2.24
1810 4901 2.489329 CTCACACCCTTTGGCATAAGTG 59.511 50.000 0.00 0.00 33.59 3.16
1841 4932 9.550406 TTTTATATAAGAGGTGTCGGGTTATTG 57.450 33.333 0.00 0.00 0.00 1.90
1842 4933 2.109425 AAGAGGTGTCGGGTTATTGC 57.891 50.000 0.00 0.00 0.00 3.56
1843 4934 0.981183 AGAGGTGTCGGGTTATTGCA 59.019 50.000 0.00 0.00 0.00 4.08
1844 4935 1.559682 AGAGGTGTCGGGTTATTGCAT 59.440 47.619 0.00 0.00 0.00 3.96
1845 4936 2.026262 AGAGGTGTCGGGTTATTGCATT 60.026 45.455 0.00 0.00 0.00 3.56
1846 4937 2.091541 AGGTGTCGGGTTATTGCATTG 58.908 47.619 0.00 0.00 0.00 2.82
1847 4938 1.134175 GGTGTCGGGTTATTGCATTGG 59.866 52.381 0.00 0.00 0.00 3.16
1848 4939 0.814457 TGTCGGGTTATTGCATTGGC 59.186 50.000 0.00 0.00 41.68 4.52
1872 4963 7.872163 CACAAGTGCATTTTTGCTTTATAGA 57.128 32.000 8.05 0.00 35.49 1.98
1873 4964 8.296799 CACAAGTGCATTTTTGCTTTATAGAA 57.703 30.769 8.05 0.00 35.49 2.10
1874 4965 8.763356 CACAAGTGCATTTTTGCTTTATAGAAA 58.237 29.630 8.05 0.00 35.49 2.52
1875 4966 9.492973 ACAAGTGCATTTTTGCTTTATAGAAAT 57.507 25.926 8.05 0.00 35.49 2.17
1876 4967 9.749490 CAAGTGCATTTTTGCTTTATAGAAATG 57.251 29.630 0.00 0.00 39.48 2.32
1877 4968 9.709495 AAGTGCATTTTTGCTTTATAGAAATGA 57.291 25.926 10.33 0.00 39.05 2.57
1878 4969 9.143631 AGTGCATTTTTGCTTTATAGAAATGAC 57.856 29.630 10.33 6.50 39.05 3.06
1879 4970 9.143631 GTGCATTTTTGCTTTATAGAAATGACT 57.856 29.630 10.33 0.00 39.05 3.41
1931 5022 8.962884 ATTTTCTTTTTGATACAAGTGCCTTT 57.037 26.923 0.00 0.00 0.00 3.11
1932 5023 8.785329 TTTTCTTTTTGATACAAGTGCCTTTT 57.215 26.923 0.00 0.00 0.00 2.27
1933 5024 8.419076 TTTCTTTTTGATACAAGTGCCTTTTC 57.581 30.769 0.00 0.00 0.00 2.29
1934 5025 6.205784 TCTTTTTGATACAAGTGCCTTTTCG 58.794 36.000 0.00 0.00 0.00 3.46
1935 5026 5.508200 TTTTGATACAAGTGCCTTTTCGT 57.492 34.783 0.00 0.00 0.00 3.85
1936 5027 5.508200 TTTGATACAAGTGCCTTTTCGTT 57.492 34.783 0.00 0.00 0.00 3.85
1937 5028 4.481930 TGATACAAGTGCCTTTTCGTTG 57.518 40.909 0.00 0.00 0.00 4.10
1938 5029 3.880490 TGATACAAGTGCCTTTTCGTTGT 59.120 39.130 0.00 0.00 35.56 3.32
1939 5030 2.559998 ACAAGTGCCTTTTCGTTGTG 57.440 45.000 0.00 0.00 30.25 3.33
1940 5031 1.816224 ACAAGTGCCTTTTCGTTGTGT 59.184 42.857 0.00 0.00 30.25 3.72
1941 5032 3.011119 ACAAGTGCCTTTTCGTTGTGTA 58.989 40.909 0.00 0.00 30.25 2.90
1942 5033 3.064820 ACAAGTGCCTTTTCGTTGTGTAG 59.935 43.478 0.00 0.00 30.25 2.74
1943 5034 3.188159 AGTGCCTTTTCGTTGTGTAGA 57.812 42.857 0.00 0.00 0.00 2.59
1944 5035 3.537580 AGTGCCTTTTCGTTGTGTAGAA 58.462 40.909 0.00 0.00 0.00 2.10
1945 5036 3.942748 AGTGCCTTTTCGTTGTGTAGAAA 59.057 39.130 0.00 0.00 34.91 2.52
1946 5037 4.035208 AGTGCCTTTTCGTTGTGTAGAAAG 59.965 41.667 0.00 0.00 37.61 2.62
1947 5038 4.034742 GTGCCTTTTCGTTGTGTAGAAAGA 59.965 41.667 0.00 0.00 37.61 2.52
1948 5039 4.272504 TGCCTTTTCGTTGTGTAGAAAGAG 59.727 41.667 0.00 0.00 37.61 2.85
1949 5040 4.773510 CCTTTTCGTTGTGTAGAAAGAGC 58.226 43.478 0.00 0.00 37.61 4.09
1950 5041 4.319549 CCTTTTCGTTGTGTAGAAAGAGCC 60.320 45.833 0.00 0.00 37.61 4.70
1951 5042 3.746045 TTCGTTGTGTAGAAAGAGCCT 57.254 42.857 0.00 0.00 0.00 4.58
1952 5043 3.746045 TCGTTGTGTAGAAAGAGCCTT 57.254 42.857 0.00 0.00 0.00 4.35
1953 5044 4.067972 TCGTTGTGTAGAAAGAGCCTTT 57.932 40.909 0.46 0.46 0.00 3.11
1954 5045 4.448210 TCGTTGTGTAGAAAGAGCCTTTT 58.552 39.130 2.33 0.00 0.00 2.27
1955 5046 4.510340 TCGTTGTGTAGAAAGAGCCTTTTC 59.490 41.667 3.06 3.06 37.34 2.29
1956 5047 4.511826 CGTTGTGTAGAAAGAGCCTTTTCT 59.488 41.667 15.02 15.02 46.27 2.52
1957 5048 5.333416 CGTTGTGTAGAAAGAGCCTTTTCTC 60.333 44.000 14.31 8.69 44.15 2.87
1958 5049 5.290493 TGTGTAGAAAGAGCCTTTTCTCA 57.710 39.130 14.31 10.53 44.15 3.27
1959 5050 5.057149 TGTGTAGAAAGAGCCTTTTCTCAC 58.943 41.667 14.31 18.33 44.15 3.51
1960 5051 5.163301 TGTGTAGAAAGAGCCTTTTCTCACT 60.163 40.000 23.78 12.72 44.15 3.41
1961 5052 5.760743 GTGTAGAAAGAGCCTTTTCTCACTT 59.239 40.000 14.31 0.00 44.15 3.16
1962 5053 5.992217 TGTAGAAAGAGCCTTTTCTCACTTC 59.008 40.000 14.31 0.00 44.15 3.01
1963 5054 5.303259 AGAAAGAGCCTTTTCTCACTTCT 57.697 39.130 7.12 0.00 42.22 2.85
1964 5055 5.304778 AGAAAGAGCCTTTTCTCACTTCTC 58.695 41.667 7.12 0.00 42.22 2.87
1965 5056 4.972751 AAGAGCCTTTTCTCACTTCTCT 57.027 40.909 0.00 0.00 35.59 3.10
1966 5057 4.535526 AGAGCCTTTTCTCACTTCTCTC 57.464 45.455 0.00 0.00 35.59 3.20
1967 5058 3.056891 AGAGCCTTTTCTCACTTCTCTCG 60.057 47.826 0.00 0.00 35.59 4.04
1968 5059 2.894126 AGCCTTTTCTCACTTCTCTCGA 59.106 45.455 0.00 0.00 0.00 4.04
1969 5060 3.513515 AGCCTTTTCTCACTTCTCTCGAT 59.486 43.478 0.00 0.00 0.00 3.59
1970 5061 4.020662 AGCCTTTTCTCACTTCTCTCGATT 60.021 41.667 0.00 0.00 0.00 3.34
1971 5062 4.693095 GCCTTTTCTCACTTCTCTCGATTT 59.307 41.667 0.00 0.00 0.00 2.17
1972 5063 5.180304 GCCTTTTCTCACTTCTCTCGATTTT 59.820 40.000 0.00 0.00 0.00 1.82
1973 5064 6.293680 GCCTTTTCTCACTTCTCTCGATTTTT 60.294 38.462 0.00 0.00 0.00 1.94
1994 5085 6.992063 TTTTTGCTTGACTTTTTGGCATAA 57.008 29.167 0.00 0.00 31.11 1.90
1995 5086 7.565323 TTTTTGCTTGACTTTTTGGCATAAT 57.435 28.000 0.00 0.00 31.11 1.28
1996 5087 7.565323 TTTTGCTTGACTTTTTGGCATAATT 57.435 28.000 0.00 0.00 31.11 1.40
1997 5088 6.542574 TTGCTTGACTTTTTGGCATAATTG 57.457 33.333 0.00 0.00 31.11 2.32
2014 5105 4.272100 GCATGTTTGCTTGCCTGG 57.728 55.556 0.00 0.00 45.77 4.45
2015 5106 2.030958 GCATGTTTGCTTGCCTGGC 61.031 57.895 12.87 12.87 45.77 4.85
2016 5107 1.669440 CATGTTTGCTTGCCTGGCT 59.331 52.632 21.03 0.00 0.00 4.75
2017 5108 0.669318 CATGTTTGCTTGCCTGGCTG 60.669 55.000 21.03 13.54 0.00 4.85
2018 5109 1.823169 ATGTTTGCTTGCCTGGCTGG 61.823 55.000 21.03 13.12 39.35 4.85
2019 5110 2.123338 TTTGCTTGCCTGGCTGGT 60.123 55.556 21.03 0.00 38.35 4.00
2020 5111 2.202395 TTTGCTTGCCTGGCTGGTC 61.202 57.895 21.03 7.01 38.35 4.02
2021 5112 4.666253 TGCTTGCCTGGCTGGTCC 62.666 66.667 21.03 4.50 38.35 4.46
2023 5114 4.020617 CTTGCCTGGCTGGTCCGA 62.021 66.667 21.03 0.00 37.80 4.55
2024 5115 3.551496 CTTGCCTGGCTGGTCCGAA 62.551 63.158 21.03 2.59 37.80 4.30
2025 5116 3.551496 TTGCCTGGCTGGTCCGAAG 62.551 63.158 21.03 0.00 37.80 3.79
2026 5117 4.021925 GCCTGGCTGGTCCGAAGT 62.022 66.667 12.43 0.00 37.80 3.01
2027 5118 2.266055 CCTGGCTGGTCCGAAGTC 59.734 66.667 1.62 0.00 37.80 3.01
2028 5119 2.583441 CCTGGCTGGTCCGAAGTCA 61.583 63.158 1.62 0.00 37.80 3.41
2029 5120 1.599047 CTGGCTGGTCCGAAGTCAT 59.401 57.895 0.00 0.00 37.80 3.06
2030 5121 0.742281 CTGGCTGGTCCGAAGTCATG 60.742 60.000 0.00 0.00 37.80 3.07
2031 5122 1.191489 TGGCTGGTCCGAAGTCATGA 61.191 55.000 0.00 0.00 37.80 3.07
2032 5123 0.179000 GGCTGGTCCGAAGTCATGAT 59.821 55.000 0.00 0.00 0.00 2.45
2033 5124 1.412710 GGCTGGTCCGAAGTCATGATA 59.587 52.381 0.00 0.00 0.00 2.15
2034 5125 2.037772 GGCTGGTCCGAAGTCATGATAT 59.962 50.000 0.00 0.00 0.00 1.63
2035 5126 3.495100 GGCTGGTCCGAAGTCATGATATT 60.495 47.826 0.00 0.00 0.00 1.28
2036 5127 4.130118 GCTGGTCCGAAGTCATGATATTT 58.870 43.478 0.00 0.00 0.00 1.40
2037 5128 4.576463 GCTGGTCCGAAGTCATGATATTTT 59.424 41.667 0.00 0.00 0.00 1.82
2038 5129 5.277538 GCTGGTCCGAAGTCATGATATTTTC 60.278 44.000 0.00 0.76 0.00 2.29
2039 5130 4.808895 TGGTCCGAAGTCATGATATTTTCG 59.191 41.667 19.12 19.12 40.03 3.46
2040 5131 4.809426 GGTCCGAAGTCATGATATTTTCGT 59.191 41.667 21.82 1.79 39.03 3.85
2041 5132 5.293569 GGTCCGAAGTCATGATATTTTCGTT 59.706 40.000 21.82 2.08 39.03 3.85
2042 5133 6.477688 GGTCCGAAGTCATGATATTTTCGTTA 59.522 38.462 21.82 13.26 39.03 3.18
2043 5134 7.170998 GGTCCGAAGTCATGATATTTTCGTTAT 59.829 37.037 21.82 0.00 39.03 1.89
2044 5135 9.188588 GTCCGAAGTCATGATATTTTCGTTATA 57.811 33.333 21.82 10.18 39.03 0.98
2045 5136 9.406828 TCCGAAGTCATGATATTTTCGTTATAG 57.593 33.333 21.82 12.83 39.03 1.31
2046 5137 9.406828 CCGAAGTCATGATATTTTCGTTATAGA 57.593 33.333 21.82 0.00 39.03 1.98
2103 5194 8.926092 AAATAAGTAGAGATAGAAATTGGGGC 57.074 34.615 0.00 0.00 0.00 5.80
2104 5195 7.880265 ATAAGTAGAGATAGAAATTGGGGCT 57.120 36.000 0.00 0.00 0.00 5.19
2105 5196 5.559148 AGTAGAGATAGAAATTGGGGCTG 57.441 43.478 0.00 0.00 0.00 4.85
2106 5197 4.971924 AGTAGAGATAGAAATTGGGGCTGT 59.028 41.667 0.00 0.00 0.00 4.40
2107 5198 4.162040 AGAGATAGAAATTGGGGCTGTG 57.838 45.455 0.00 0.00 0.00 3.66
2108 5199 2.620585 GAGATAGAAATTGGGGCTGTGC 59.379 50.000 0.00 0.00 0.00 4.57
2109 5200 1.334869 GATAGAAATTGGGGCTGTGCG 59.665 52.381 0.00 0.00 0.00 5.34
2110 5201 0.037590 TAGAAATTGGGGCTGTGCGT 59.962 50.000 0.00 0.00 0.00 5.24
2111 5202 0.037590 AGAAATTGGGGCTGTGCGTA 59.962 50.000 0.00 0.00 0.00 4.42
2112 5203 0.451783 GAAATTGGGGCTGTGCGTAG 59.548 55.000 0.00 0.00 0.00 3.51
2126 5217 2.208527 CGTAGCTACCACCATGGGT 58.791 57.895 18.09 7.84 43.37 4.51
2127 5218 1.405872 CGTAGCTACCACCATGGGTA 58.594 55.000 18.09 8.65 43.37 3.69
2131 5222 4.789899 TACCACCATGGGTAGCGA 57.210 55.556 18.09 0.00 43.37 4.93
2132 5223 2.993977 TACCACCATGGGTAGCGAA 58.006 52.632 18.09 0.00 43.37 4.70
2133 5224 1.502690 TACCACCATGGGTAGCGAAT 58.497 50.000 18.09 0.00 43.37 3.34
2134 5225 0.623723 ACCACCATGGGTAGCGAATT 59.376 50.000 18.09 0.00 43.37 2.17
2135 5226 1.841277 ACCACCATGGGTAGCGAATTA 59.159 47.619 18.09 0.00 43.37 1.40
2136 5227 2.441750 ACCACCATGGGTAGCGAATTAT 59.558 45.455 18.09 0.00 43.37 1.28
2137 5228 3.117663 ACCACCATGGGTAGCGAATTATT 60.118 43.478 18.09 0.00 43.37 1.40
2138 5229 3.888930 CCACCATGGGTAGCGAATTATTT 59.111 43.478 18.09 0.00 32.11 1.40
2139 5230 4.023193 CCACCATGGGTAGCGAATTATTTC 60.023 45.833 18.09 0.00 32.11 2.17
2140 5231 4.023193 CACCATGGGTAGCGAATTATTTCC 60.023 45.833 18.09 0.00 32.11 3.13
2141 5232 3.188460 CCATGGGTAGCGAATTATTTCCG 59.812 47.826 2.85 0.00 0.00 4.30
2142 5233 3.547054 TGGGTAGCGAATTATTTCCGT 57.453 42.857 0.00 0.00 0.00 4.69
2143 5234 3.876341 TGGGTAGCGAATTATTTCCGTT 58.124 40.909 0.00 0.00 0.00 4.44
2144 5235 3.623960 TGGGTAGCGAATTATTTCCGTTG 59.376 43.478 0.00 0.00 0.00 4.10
2145 5236 3.624410 GGGTAGCGAATTATTTCCGTTGT 59.376 43.478 0.00 0.00 0.00 3.32
2146 5237 4.095334 GGGTAGCGAATTATTTCCGTTGTT 59.905 41.667 0.00 0.00 0.00 2.83
2147 5238 5.294060 GGGTAGCGAATTATTTCCGTTGTTA 59.706 40.000 0.00 0.00 0.00 2.41
2148 5239 6.416514 GGTAGCGAATTATTTCCGTTGTTAG 58.583 40.000 0.00 0.00 0.00 2.34
2149 5240 6.036408 GGTAGCGAATTATTTCCGTTGTTAGT 59.964 38.462 0.00 0.00 0.00 2.24
2150 5241 7.222611 GGTAGCGAATTATTTCCGTTGTTAGTA 59.777 37.037 0.00 0.00 0.00 1.82
2151 5242 7.599630 AGCGAATTATTTCCGTTGTTAGTAA 57.400 32.000 0.00 0.00 0.00 2.24
2252 5348 7.336931 TGTTTAGAGGATGGCTAGAATCAAAAC 59.663 37.037 0.00 6.27 0.00 2.43
2260 5356 5.569355 TGGCTAGAATCAAAACAATCCTCA 58.431 37.500 0.00 0.00 0.00 3.86
2319 5417 8.267367 GCGTAAAAGAGTTCTGCTTATATGTAC 58.733 37.037 0.00 0.00 0.00 2.90
2326 5424 8.462811 AGAGTTCTGCTTATATGTACATATCCG 58.537 37.037 27.61 20.49 35.71 4.18
2327 5425 7.036220 AGTTCTGCTTATATGTACATATCCGC 58.964 38.462 27.61 27.04 35.71 5.54
2402 5501 4.887071 TCTGTTGTATTCACAGTTTGCCTT 59.113 37.500 0.24 0.00 35.67 4.35
2410 5509 3.855858 TCACAGTTTGCCTTTTGTTTCC 58.144 40.909 0.00 0.00 0.00 3.13
2586 5685 5.010112 GGACACATGCTATGCTAGTCTTCTA 59.990 44.000 0.00 0.00 33.29 2.10
2664 5763 1.723870 CCATGACGCCAGCTAAAGC 59.276 57.895 0.00 0.00 42.49 3.51
2677 5776 2.162681 GCTAAAGCAGGCAAGGAGAAA 58.837 47.619 0.00 0.00 41.59 2.52
2745 5844 0.321298 ATGGTTCGTTAGTTGCCGCT 60.321 50.000 0.00 0.00 0.00 5.52
2787 5886 4.940463 ACATAATGATGCTGAACAATGGC 58.060 39.130 0.00 0.00 36.43 4.40
2915 6014 4.700692 GGAAACTTTGTAGGAACAGGATCC 59.299 45.833 2.48 2.48 36.83 3.36
2933 6032 5.136737 AGGATCCCCACCATAATCAAGAAAT 59.863 40.000 8.55 0.00 33.88 2.17
2954 6053 8.547173 AGAAATCCTGTGAGATGTAATTCTCTT 58.453 33.333 3.41 0.00 42.22 2.85
2980 6080 5.659079 AGGTTAAACATCACCCAACTTTGAA 59.341 36.000 0.00 0.00 32.92 2.69
3036 6136 1.134965 CCATGTCGAGTTCTCTGACCC 60.135 57.143 15.86 1.71 0.00 4.46
3094 6194 7.164122 CAGCACCCATAATACAGACATTCTAT 58.836 38.462 0.00 0.00 0.00 1.98
3208 6308 3.785887 AGCCCAAGGGTATAGTCAATGAA 59.214 43.478 7.05 0.00 37.65 2.57
3339 6439 8.955794 AGGCCCTTTGTATTATTTCTATCCTTA 58.044 33.333 0.00 0.00 0.00 2.69
3438 6541 3.380637 AGCGTATAAGGGTCAGTACAGTG 59.619 47.826 0.00 0.00 0.00 3.66
3444 6547 1.279271 AGGGTCAGTACAGTGCATTCC 59.721 52.381 0.00 0.00 0.00 3.01
3445 6548 1.003118 GGGTCAGTACAGTGCATTCCA 59.997 52.381 0.00 0.00 0.00 3.53
3633 6737 4.652421 TTTTGGACCTTCCGTTTTTACC 57.348 40.909 0.00 0.00 40.17 2.85
3746 6850 7.044181 CACACTGGAATGATACATCTACAAGT 58.956 38.462 0.00 0.00 0.00 3.16
3830 6934 4.134379 ACTGCTGTGTGGATAGAATGAG 57.866 45.455 0.00 0.00 0.00 2.90
4076 7183 7.176165 ACACATTAGATGGCTCAATCCAATATG 59.824 37.037 0.00 0.00 39.96 1.78
4130 7238 5.604231 ACTCTTTGGGATATCATCAGTGCTA 59.396 40.000 4.83 0.00 0.00 3.49
4138 7246 5.814705 GGATATCATCAGTGCTACTTATGCC 59.185 44.000 4.83 0.00 31.62 4.40
4140 7248 4.327982 TCATCAGTGCTACTTATGCCTC 57.672 45.455 5.91 0.00 31.62 4.70
4219 7328 8.477419 TTTTCTTGGTAGAATCATCTGGTTTT 57.523 30.769 0.00 0.00 40.01 2.43
4220 7329 9.581289 TTTTCTTGGTAGAATCATCTGGTTTTA 57.419 29.630 0.00 0.00 40.01 1.52
4255 7364 0.874390 CACTAAACAGTGCACGCCAT 59.126 50.000 12.01 2.28 32.72 4.40
4281 7412 7.764443 TGTAGAGATCGTTCTTTATTTTCCCTG 59.236 37.037 0.00 0.00 30.30 4.45
4315 7446 6.673316 GCTCTAGTTGCTCAAATTAGGAAACG 60.673 42.308 3.84 0.00 0.00 3.60
4417 7548 3.968649 ACATGAACATGAACACAAGCAC 58.031 40.909 19.56 0.00 41.20 4.40
4426 7557 2.031560 TGAACACAAGCACGAACATGAC 59.968 45.455 0.00 0.00 0.00 3.06
4437 7586 1.064505 CGAACATGACCATGACCATGC 59.935 52.381 20.13 9.46 42.77 4.06
4442 7591 2.045045 ACCATGACCATGCCCACG 60.045 61.111 4.53 0.00 37.49 4.94
4443 7592 2.271821 CCATGACCATGCCCACGA 59.728 61.111 4.53 0.00 37.49 4.35
4444 7593 2.114670 CCATGACCATGCCCACGAC 61.115 63.158 4.53 0.00 37.49 4.34
4445 7594 2.114670 CATGACCATGCCCACGACC 61.115 63.158 0.00 0.00 31.39 4.79
4446 7595 2.601702 ATGACCATGCCCACGACCA 61.602 57.895 0.00 0.00 0.00 4.02
4447 7596 2.746277 GACCATGCCCACGACCAC 60.746 66.667 0.00 0.00 0.00 4.16
4505 7654 6.038161 TGGTGAGCATAGTATTATTTGTGTGC 59.962 38.462 0.00 0.00 0.00 4.57
4676 7827 9.847224 TGAAAAGGTCAGACTTAAAATTACTCT 57.153 29.630 0.00 0.00 0.00 3.24
4678 7829 9.628500 AAAAGGTCAGACTTAAAATTACTCTGT 57.372 29.630 0.00 0.00 31.94 3.41
4680 7831 9.930693 AAGGTCAGACTTAAAATTACTCTGTAG 57.069 33.333 0.00 0.00 31.94 2.74
4681 7832 9.091220 AGGTCAGACTTAAAATTACTCTGTAGT 57.909 33.333 0.00 0.00 39.91 2.73
4787 7939 5.947228 ATTTATGACCCTGCACATTATCG 57.053 39.130 0.00 0.00 0.00 2.92
4926 8078 0.598065 GTGGAATGCCTCAACGCTTT 59.402 50.000 0.00 0.00 34.31 3.51
4992 8152 6.377327 TCAATTTGTTCTCCTGTTCTTGTC 57.623 37.500 0.00 0.00 0.00 3.18
5014 8174 7.819644 TGTCAATGGAAACTAATCATGTCTTG 58.180 34.615 0.00 0.00 0.00 3.02
5028 8188 5.532557 TCATGTCTTGTCTAGTGACTTGTG 58.467 41.667 0.00 9.89 43.29 3.33
5127 8287 5.532406 AGCAGCTTGTCTTTTCTTTCATGTA 59.468 36.000 0.00 0.00 0.00 2.29
5148 8309 9.265901 CATGTACTTATTTGCTCTGCTATTAGT 57.734 33.333 0.00 0.00 0.00 2.24
5234 8397 8.677300 TCTGCAGAATTTAACAAGATAATCCAC 58.323 33.333 15.67 0.00 0.00 4.02
5248 8411 0.398696 ATCCACGCCAACAACCACTA 59.601 50.000 0.00 0.00 0.00 2.74
5255 8418 2.287368 CGCCAACAACCACTACTTTTCC 60.287 50.000 0.00 0.00 0.00 3.13
5330 8495 5.353123 TCGTTTGTGTTTACTGAGCTTTCTT 59.647 36.000 0.00 0.00 0.00 2.52
5357 8522 1.665599 GCGCCATGTGCTTTGCTTT 60.666 52.632 0.00 0.00 38.05 3.51
5418 8583 4.954970 CCACGCCCAAGCACCAGT 62.955 66.667 0.00 0.00 39.83 4.00
5446 8611 9.346725 GCTTGATCTTAATGGTTCTTTAACTTG 57.653 33.333 0.00 0.00 35.81 3.16
5470 8635 8.012957 TGTACTCCTGATCTAAGATCCTTTTC 57.987 38.462 0.00 0.00 0.00 2.29
5481 8647 8.202461 TCTAAGATCCTTTTCTTGTCCAACTA 57.798 34.615 0.00 0.00 36.63 2.24
5600 8769 9.889128 ATTTTTCTTTCAAATTTTCCTGAGTGA 57.111 25.926 0.00 0.00 0.00 3.41
5624 8796 5.061179 ACGAACAATTAGCTAGGTGTTGTT 58.939 37.500 26.47 26.47 43.39 2.83
5628 8800 5.528870 ACAATTAGCTAGGTGTTGTTTTGC 58.471 37.500 16.86 0.00 29.38 3.68
5631 8803 1.133482 AGCTAGGTGTTGTTTTGCCCT 60.133 47.619 0.00 0.00 0.00 5.19
5635 8807 0.673985 GGTGTTGTTTTGCCCTCTCC 59.326 55.000 0.00 0.00 0.00 3.71
5907 9079 5.590259 ACCTTATCCTTCATTGAAATGTCGG 59.410 40.000 0.01 5.32 37.65 4.79
5914 9086 5.048782 CCTTCATTGAAATGTCGGAAACTGA 60.049 40.000 0.01 0.00 37.65 3.41
5931 9103 6.445357 AAACTGAAACCGTTATTGAACTGT 57.555 33.333 0.00 0.00 34.80 3.55
5936 9108 3.374220 ACCGTTATTGAACTGTCACGA 57.626 42.857 0.00 0.00 31.90 4.35
6030 9202 3.243877 CGCAGATGTCTACTGTTATGCAC 59.756 47.826 0.00 0.00 37.64 4.57
6066 9238 7.261325 TGTGACTTGCAGAGATTTATAGACTC 58.739 38.462 3.37 0.00 0.00 3.36
6090 9262 3.817647 ACTGTGACTTGAGGAATTGCTTC 59.182 43.478 0.00 0.00 0.00 3.86
6091 9263 3.817084 CTGTGACTTGAGGAATTGCTTCA 59.183 43.478 0.00 0.00 32.70 3.02
6108 9280 7.499321 TTGCTTCATAAGTCCGAAAAGTTTA 57.501 32.000 0.00 0.00 0.00 2.01
6127 9299 6.370593 AGTTTACATAGCATGTGTTTCGTTG 58.629 36.000 10.77 0.00 44.60 4.10
6179 9352 5.597806 CTGAATACGGCTGAAGTTGGTATA 58.402 41.667 0.00 0.00 0.00 1.47
6260 9460 6.286240 TGTCTACTGTTATGACTTGCAGAT 57.714 37.500 0.00 0.00 33.57 2.90
6393 9600 4.120646 CTGTTCTGAAACAACAGTAGCG 57.879 45.455 4.69 0.00 44.53 4.26
6397 9604 2.069273 CTGAAACAACAGTAGCGGAGG 58.931 52.381 0.00 0.00 33.73 4.30
6432 9639 1.907222 GCTACTAGGGTTTGGGGCGT 61.907 60.000 0.00 0.00 0.00 5.68
6465 9672 2.665000 CTGGGTGGTCAGATGCGT 59.335 61.111 0.00 0.00 36.93 5.24
6469 9676 1.672356 GGTGGTCAGATGCGTGCTT 60.672 57.895 0.00 0.00 0.00 3.91
6480 9687 0.534877 TGCGTGCTTCAATGAGTGGT 60.535 50.000 0.00 0.00 0.00 4.16
6485 9692 2.880890 GTGCTTCAATGAGTGGTGAACT 59.119 45.455 0.00 0.00 43.85 3.01
6487 9694 2.227388 GCTTCAATGAGTGGTGAACTGG 59.773 50.000 0.00 0.00 40.07 4.00
6493 9700 1.140852 TGAGTGGTGAACTGGGAACTG 59.859 52.381 0.00 0.00 40.07 3.16
6532 9739 9.770097 TGAATATGTTCATAATCTGAGAGAACC 57.230 33.333 0.03 0.00 39.36 3.62
6535 9742 6.358974 TGTTCATAATCTGAGAGAACCACA 57.641 37.500 9.06 0.00 38.17 4.17
6536 9743 6.950842 TGTTCATAATCTGAGAGAACCACAT 58.049 36.000 9.06 0.00 38.17 3.21
6566 9773 1.168714 AGCGCCTTGAGAAATGGTTC 58.831 50.000 2.29 0.00 0.00 3.62
6567 9774 0.881118 GCGCCTTGAGAAATGGTTCA 59.119 50.000 0.00 0.00 36.09 3.18
6577 9784 8.306038 CCTTGAGAAATGGTTCAAAATCACATA 58.694 33.333 0.00 0.00 36.09 2.29
6578 9785 9.132521 CTTGAGAAATGGTTCAAAATCACATAC 57.867 33.333 0.00 0.00 36.09 2.39
6580 9787 8.081633 TGAGAAATGGTTCAAAATCACATACAC 58.918 33.333 0.00 0.00 36.09 2.90
6648 9857 1.905215 AGACAACATGACTGGAGAGGG 59.095 52.381 0.00 0.00 0.00 4.30
6649 9858 1.902508 GACAACATGACTGGAGAGGGA 59.097 52.381 0.00 0.00 0.00 4.20
6680 9889 1.647346 TTCATATCGGAACCGTGTGC 58.353 50.000 12.93 0.00 40.74 4.57
6686 9895 2.898343 GGAACCGTGTGCCGTTGT 60.898 61.111 0.00 0.00 33.66 3.32
6698 9907 1.367471 CCGTTGTCTGCTCACCTCA 59.633 57.895 0.00 0.00 0.00 3.86
6699 9908 0.249868 CCGTTGTCTGCTCACCTCAA 60.250 55.000 0.00 0.00 0.00 3.02
6720 9929 1.841919 TGAGATGTCTGACCATGGCAT 59.158 47.619 13.04 6.58 0.00 4.40
6739 9948 3.480470 CATGACTGGTTTCCTCACAAGT 58.520 45.455 0.00 0.00 0.00 3.16
6740 9949 3.194005 TGACTGGTTTCCTCACAAGTC 57.806 47.619 1.93 1.93 0.00 3.01
6741 9950 2.503765 TGACTGGTTTCCTCACAAGTCA 59.496 45.455 6.92 6.92 33.41 3.41
6742 9951 2.872858 GACTGGTTTCCTCACAAGTCAC 59.127 50.000 3.85 0.00 0.00 3.67
6743 9952 2.238646 ACTGGTTTCCTCACAAGTCACA 59.761 45.455 0.00 0.00 0.00 3.58
6744 9953 3.278574 CTGGTTTCCTCACAAGTCACAA 58.721 45.455 0.00 0.00 0.00 3.33
6745 9954 3.278574 TGGTTTCCTCACAAGTCACAAG 58.721 45.455 0.00 0.00 0.00 3.16
6753 9962 1.334869 CACAAGTCACAAGCCAAGTCC 59.665 52.381 0.00 0.00 0.00 3.85
6756 9965 0.468226 AGTCACAAGCCAAGTCCGAA 59.532 50.000 0.00 0.00 0.00 4.30
6762 9971 2.154462 CAAGCCAAGTCCGAATGAGTT 58.846 47.619 0.00 0.00 37.08 3.01
6765 9974 1.610624 GCCAAGTCCGAATGAGTTCCA 60.611 52.381 0.00 0.00 34.28 3.53
6786 9995 6.637657 TCCATATAGCAGATCAATACAGCTG 58.362 40.000 13.48 13.48 36.80 4.24
6790 9999 3.794717 AGCAGATCAATACAGCTGAGTG 58.205 45.455 23.35 14.62 33.67 3.51
6794 10003 5.042593 CAGATCAATACAGCTGAGTGAGAC 58.957 45.833 23.35 16.10 0.00 3.36
6815 10024 2.418746 CGTTCCTGGTCTCCAACATAGG 60.419 54.545 0.00 0.00 35.92 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
100 101 0.455633 GAAGAACGCCGTCTCGCTAA 60.456 55.000 0.00 0.00 0.00 3.09
120 121 3.690460 AGATTGATGTGACCAAACCTCC 58.310 45.455 0.00 0.00 0.00 4.30
128 129 3.356529 AGGGTGAAGATTGATGTGACC 57.643 47.619 0.00 0.00 0.00 4.02
149 150 0.182775 AGGGGAACTTTGCTCGTGTT 59.817 50.000 0.00 0.00 0.00 3.32
176 177 2.417516 GCCGAGCCTAGATCGCAA 59.582 61.111 10.73 0.00 40.26 4.85
227 3266 5.047092 GGATGGCTTTTTCTCCAAGATCAAA 60.047 40.000 0.00 0.00 35.75 2.69
287 3326 2.695666 ACCCTCCACTATTGATCTCACG 59.304 50.000 0.00 0.00 0.00 4.35
323 3362 2.046604 GGTGGTTCTGGCCCGTAC 60.047 66.667 0.00 0.00 0.00 3.67
394 3434 0.825010 CCCTGCAGTTTGCCTGTCTT 60.825 55.000 13.81 0.00 44.23 3.01
415 3455 7.492352 ACGCCCATTAGAAGAAAATATGTAC 57.508 36.000 0.00 0.00 0.00 2.90
430 3470 3.709653 AGGAAGTGAAGATACGCCCATTA 59.290 43.478 0.00 0.00 0.00 1.90
432 3472 2.119495 AGGAAGTGAAGATACGCCCAT 58.881 47.619 0.00 0.00 0.00 4.00
513 3553 2.086869 CAATAGCCAGGGTTCACACAG 58.913 52.381 0.00 0.00 0.00 3.66
559 3599 3.899980 TGATCGTGGAGGATGATGAGATT 59.100 43.478 0.00 0.00 29.73 2.40
642 3683 1.986757 ATCTGGCTCAGGTGCGACT 60.987 57.895 2.86 0.00 31.51 4.18
647 3688 3.200593 GCGCATCTGGCTCAGGTG 61.201 66.667 0.30 10.18 44.62 4.00
679 3720 2.741145 AGAGAACTCTACGGGCAAGAT 58.259 47.619 2.24 0.00 38.35 2.40
694 3735 1.980232 TACCGCCCGCAGAAGAGAA 60.980 57.895 0.00 0.00 0.00 2.87
751 3792 2.442272 TAGTCAGGGCTCTCGGGC 60.442 66.667 0.00 0.00 40.05 6.13
765 3807 1.392710 CCCATCTTCTCGCCGGTAGT 61.393 60.000 1.90 0.00 0.00 2.73
837 3880 5.401531 TTTGCAGTAGATCCTCGTAGTTT 57.598 39.130 0.00 0.00 0.00 2.66
840 3883 3.067461 AGCTTTGCAGTAGATCCTCGTAG 59.933 47.826 2.38 0.00 0.00 3.51
841 3884 3.024547 AGCTTTGCAGTAGATCCTCGTA 58.975 45.455 2.38 0.00 0.00 3.43
842 3885 1.827969 AGCTTTGCAGTAGATCCTCGT 59.172 47.619 2.38 0.00 0.00 4.18
843 3886 2.468831 GAGCTTTGCAGTAGATCCTCG 58.531 52.381 5.20 0.00 0.00 4.63
844 3887 2.801342 CGGAGCTTTGCAGTAGATCCTC 60.801 54.545 24.10 11.87 44.18 3.71
845 3888 1.137872 CGGAGCTTTGCAGTAGATCCT 59.862 52.381 24.10 5.37 44.18 3.24
846 3889 1.134670 ACGGAGCTTTGCAGTAGATCC 60.135 52.381 19.68 19.68 43.19 3.36
847 3890 2.301577 ACGGAGCTTTGCAGTAGATC 57.698 50.000 7.43 7.43 0.00 2.75
848 3891 3.722147 CATACGGAGCTTTGCAGTAGAT 58.278 45.455 2.38 0.00 0.00 1.98
849 3892 2.738643 GCATACGGAGCTTTGCAGTAGA 60.739 50.000 2.38 0.00 35.22 2.59
850 3893 1.594862 GCATACGGAGCTTTGCAGTAG 59.405 52.381 0.00 0.00 35.22 2.57
851 3894 1.207089 AGCATACGGAGCTTTGCAGTA 59.793 47.619 0.00 0.00 39.87 2.74
852 3895 0.036010 AGCATACGGAGCTTTGCAGT 60.036 50.000 0.00 0.00 39.87 4.40
853 3896 0.654683 GAGCATACGGAGCTTTGCAG 59.345 55.000 0.00 0.00 43.58 4.41
854 3897 0.744414 GGAGCATACGGAGCTTTGCA 60.744 55.000 0.00 0.00 43.58 4.08
855 3898 1.766143 CGGAGCATACGGAGCTTTGC 61.766 60.000 0.00 0.00 43.58 3.68
856 3899 2.301505 CGGAGCATACGGAGCTTTG 58.698 57.895 0.00 0.00 43.58 2.77
857 3900 4.835927 CGGAGCATACGGAGCTTT 57.164 55.556 0.00 0.00 43.58 3.51
873 3916 3.217743 GGAGTCCCTCCGCTACCG 61.218 72.222 0.00 0.00 41.08 4.02
880 3923 3.459063 CCCGTTCGGAGTCCCTCC 61.459 72.222 13.08 0.00 46.44 4.30
881 3924 4.144703 GCCCGTTCGGAGTCCCTC 62.145 72.222 13.08 0.00 0.00 4.30
885 3928 2.743126 AAAAGGGCCCGTTCGGAGTC 62.743 60.000 24.05 4.49 0.00 3.36
886 3929 1.482748 TAAAAGGGCCCGTTCGGAGT 61.483 55.000 24.05 10.09 0.00 3.85
887 3930 1.022982 GTAAAAGGGCCCGTTCGGAG 61.023 60.000 24.05 4.30 0.00 4.63
888 3931 1.003476 GTAAAAGGGCCCGTTCGGA 60.003 57.895 24.05 9.37 0.00 4.55
889 3932 1.002990 AGTAAAAGGGCCCGTTCGG 60.003 57.895 24.05 4.08 0.00 4.30
890 3933 1.918868 GCAGTAAAAGGGCCCGTTCG 61.919 60.000 24.05 13.13 0.00 3.95
891 3934 1.592400 GGCAGTAAAAGGGCCCGTTC 61.592 60.000 24.05 12.13 41.90 3.95
892 3935 1.605451 GGCAGTAAAAGGGCCCGTT 60.605 57.895 18.25 18.25 41.90 4.44
893 3936 2.035155 GGCAGTAAAAGGGCCCGT 59.965 61.111 18.44 11.44 41.90 5.28
897 3940 2.351244 GGGCTGGCAGTAAAAGGGC 61.351 63.158 17.16 0.56 0.00 5.19
898 3941 2.046285 CGGGCTGGCAGTAAAAGGG 61.046 63.158 17.16 0.00 0.00 3.95
899 3942 0.893727 AACGGGCTGGCAGTAAAAGG 60.894 55.000 17.16 2.76 0.00 3.11
900 3943 0.521735 GAACGGGCTGGCAGTAAAAG 59.478 55.000 17.16 6.24 0.00 2.27
901 3944 1.231958 CGAACGGGCTGGCAGTAAAA 61.232 55.000 17.16 0.00 0.00 1.52
902 3945 1.669760 CGAACGGGCTGGCAGTAAA 60.670 57.895 17.16 0.00 0.00 2.01
930 3973 3.103742 GGGATGGGCCATTACTTGAAAA 58.896 45.455 22.20 0.00 38.95 2.29
962 4005 1.834188 GAATTTGGGCTTCCTCCGAA 58.166 50.000 0.00 0.00 32.69 4.30
1311 4370 2.180204 GTTGTCGGGCGGGATCATG 61.180 63.158 0.00 0.00 0.00 3.07
1312 4371 2.189521 GTTGTCGGGCGGGATCAT 59.810 61.111 0.00 0.00 0.00 2.45
1445 4504 4.157120 GCGGGAGGGCGTGTATGT 62.157 66.667 0.00 0.00 0.00 2.29
1480 4539 9.289303 CACAACAATATGGTAATCTAGCAAAAC 57.711 33.333 0.00 0.00 39.89 2.43
1483 4542 9.845740 ATACACAACAATATGGTAATCTAGCAA 57.154 29.630 0.00 0.00 39.89 3.91
1484 4543 9.489084 GATACACAACAATATGGTAATCTAGCA 57.511 33.333 0.00 0.00 40.84 3.49
1485 4544 8.936864 GGATACACAACAATATGGTAATCTAGC 58.063 37.037 0.00 0.00 0.00 3.42
1486 4545 9.140286 CGGATACACAACAATATGGTAATCTAG 57.860 37.037 0.00 0.00 0.00 2.43
1505 4591 2.166870 ACAATCCACTAACGCGGATACA 59.833 45.455 12.47 0.00 41.28 2.29
1518 4604 3.933332 GCTTAGACTGTACCACAATCCAC 59.067 47.826 0.00 0.00 0.00 4.02
1523 4609 6.944290 TCTAACTAGCTTAGACTGTACCACAA 59.056 38.462 0.00 0.00 36.67 3.33
1525 4611 6.598850 ACTCTAACTAGCTTAGACTGTACCAC 59.401 42.308 0.00 0.00 36.67 4.16
1527 4613 7.041848 GCTACTCTAACTAGCTTAGACTGTACC 60.042 44.444 0.00 3.19 36.67 3.34
1531 4617 6.238538 GGTGCTACTCTAACTAGCTTAGACTG 60.239 46.154 0.00 5.74 36.67 3.51
1550 4636 0.755079 CTGATGCTGGCTAGGTGCTA 59.245 55.000 0.00 0.00 42.39 3.49
1571 4657 6.102663 CGAACTATCTCAAGGTTTCAGTGAT 58.897 40.000 0.00 0.00 0.00 3.06
1616 4703 7.173218 TCAATCAATGTTCTAAACCTCACAGTC 59.827 37.037 0.00 0.00 0.00 3.51
1632 4719 8.730680 GTCCTAGTGTTATTTGTCAATCAATGT 58.269 33.333 0.00 0.00 35.84 2.71
1725 4816 6.222038 TCGCCTCTCTTACTAACAATGATT 57.778 37.500 0.00 0.00 0.00 2.57
1740 4831 2.533266 TGCATAGGAAATCGCCTCTC 57.467 50.000 0.00 0.00 39.50 3.20
1741 4832 2.551721 CCATGCATAGGAAATCGCCTCT 60.552 50.000 0.00 0.00 39.50 3.69
1742 4833 1.808945 CCATGCATAGGAAATCGCCTC 59.191 52.381 0.00 0.00 39.50 4.70
1743 4834 1.143684 ACCATGCATAGGAAATCGCCT 59.856 47.619 18.41 0.00 42.15 5.52
1744 4835 1.267806 CACCATGCATAGGAAATCGCC 59.732 52.381 18.41 0.00 0.00 5.54
1745 4836 1.267806 CCACCATGCATAGGAAATCGC 59.732 52.381 18.41 0.00 0.00 4.58
1746 4837 2.575532 ACCACCATGCATAGGAAATCG 58.424 47.619 18.41 0.00 0.00 3.34
1747 4838 3.503748 GCTACCACCATGCATAGGAAATC 59.496 47.826 18.41 3.64 0.00 2.17
1748 4839 3.139025 AGCTACCACCATGCATAGGAAAT 59.861 43.478 18.41 7.98 0.00 2.17
1749 4840 2.509548 AGCTACCACCATGCATAGGAAA 59.490 45.455 18.41 6.82 0.00 3.13
1750 4841 2.126882 AGCTACCACCATGCATAGGAA 58.873 47.619 18.41 4.21 0.00 3.36
1751 4842 1.806496 AGCTACCACCATGCATAGGA 58.194 50.000 18.41 0.00 0.00 2.94
1752 4843 2.610479 CGTAGCTACCACCATGCATAGG 60.610 54.545 18.16 6.24 0.00 2.57
1753 4844 2.610479 CCGTAGCTACCACCATGCATAG 60.610 54.545 18.16 0.00 0.00 2.23
1754 4845 1.343142 CCGTAGCTACCACCATGCATA 59.657 52.381 18.16 0.00 0.00 3.14
1755 4846 0.106708 CCGTAGCTACCACCATGCAT 59.893 55.000 18.16 0.00 0.00 3.96
1756 4847 0.973496 TCCGTAGCTACCACCATGCA 60.973 55.000 18.16 0.00 0.00 3.96
1757 4848 0.529992 GTCCGTAGCTACCACCATGC 60.530 60.000 18.16 0.00 0.00 4.06
1758 4849 0.248907 CGTCCGTAGCTACCACCATG 60.249 60.000 18.16 2.89 0.00 3.66
1759 4850 2.012902 GCGTCCGTAGCTACCACCAT 62.013 60.000 18.16 0.00 0.00 3.55
1760 4851 2.703798 GCGTCCGTAGCTACCACCA 61.704 63.158 18.16 0.00 0.00 4.17
1761 4852 2.012902 ATGCGTCCGTAGCTACCACC 62.013 60.000 18.16 9.38 35.28 4.61
1762 4853 0.870307 CATGCGTCCGTAGCTACCAC 60.870 60.000 18.16 13.37 35.28 4.16
1763 4854 1.435925 CATGCGTCCGTAGCTACCA 59.564 57.895 18.16 9.99 35.28 3.25
1764 4855 1.299926 CCATGCGTCCGTAGCTACC 60.300 63.158 18.16 4.30 35.28 3.18
1765 4856 0.870307 CACCATGCGTCCGTAGCTAC 60.870 60.000 14.19 14.19 35.28 3.58
1766 4857 1.435925 CACCATGCGTCCGTAGCTA 59.564 57.895 0.00 0.00 35.28 3.32
1767 4858 2.184322 CACCATGCGTCCGTAGCT 59.816 61.111 0.00 0.00 35.28 3.32
1768 4859 2.890474 CCACCATGCGTCCGTAGC 60.890 66.667 0.00 0.00 0.00 3.58
1769 4860 2.890474 GCCACCATGCGTCCGTAG 60.890 66.667 0.00 0.00 0.00 3.51
1778 4869 3.434319 GTGTGAGCCGCCACCATG 61.434 66.667 8.84 0.00 36.26 3.66
1782 4873 4.643387 AAGGGTGTGAGCCGCCAC 62.643 66.667 5.35 5.35 46.21 5.01
1783 4874 3.884774 AAAGGGTGTGAGCCGCCA 61.885 61.111 0.00 0.00 46.21 5.69
1784 4875 3.365265 CAAAGGGTGTGAGCCGCC 61.365 66.667 0.00 0.00 41.56 6.13
1785 4876 3.365265 CCAAAGGGTGTGAGCCGC 61.365 66.667 0.00 0.00 41.56 6.53
1786 4877 3.365265 GCCAAAGGGTGTGAGCCG 61.365 66.667 0.00 0.00 41.56 5.52
1787 4878 0.323360 TATGCCAAAGGGTGTGAGCC 60.323 55.000 0.00 0.00 36.17 4.70
1788 4879 1.474077 CTTATGCCAAAGGGTGTGAGC 59.526 52.381 0.00 0.00 36.17 4.26
1789 4880 2.489329 CACTTATGCCAAAGGGTGTGAG 59.511 50.000 0.82 0.00 36.17 3.51
1790 4881 2.513753 CACTTATGCCAAAGGGTGTGA 58.486 47.619 0.82 0.00 36.17 3.58
1791 4882 1.067635 GCACTTATGCCAAAGGGTGTG 60.068 52.381 0.01 0.00 46.97 3.82
1792 4883 1.256812 GCACTTATGCCAAAGGGTGT 58.743 50.000 0.01 0.00 46.97 4.16
1815 4906 9.550406 CAATAACCCGACACCTCTTATATAAAA 57.450 33.333 0.00 0.00 0.00 1.52
1816 4907 7.658575 GCAATAACCCGACACCTCTTATATAAA 59.341 37.037 0.00 0.00 0.00 1.40
1817 4908 7.156673 GCAATAACCCGACACCTCTTATATAA 58.843 38.462 0.00 0.00 0.00 0.98
1818 4909 6.268158 TGCAATAACCCGACACCTCTTATATA 59.732 38.462 0.00 0.00 0.00 0.86
1819 4910 5.071250 TGCAATAACCCGACACCTCTTATAT 59.929 40.000 0.00 0.00 0.00 0.86
1820 4911 4.406326 TGCAATAACCCGACACCTCTTATA 59.594 41.667 0.00 0.00 0.00 0.98
1821 4912 3.199071 TGCAATAACCCGACACCTCTTAT 59.801 43.478 0.00 0.00 0.00 1.73
1822 4913 2.568062 TGCAATAACCCGACACCTCTTA 59.432 45.455 0.00 0.00 0.00 2.10
1823 4914 1.349688 TGCAATAACCCGACACCTCTT 59.650 47.619 0.00 0.00 0.00 2.85
1824 4915 0.981183 TGCAATAACCCGACACCTCT 59.019 50.000 0.00 0.00 0.00 3.69
1825 4916 2.038387 ATGCAATAACCCGACACCTC 57.962 50.000 0.00 0.00 0.00 3.85
1826 4917 2.091541 CAATGCAATAACCCGACACCT 58.908 47.619 0.00 0.00 0.00 4.00
1827 4918 1.134175 CCAATGCAATAACCCGACACC 59.866 52.381 0.00 0.00 0.00 4.16
1828 4919 1.469079 GCCAATGCAATAACCCGACAC 60.469 52.381 0.00 0.00 37.47 3.67
1829 4920 0.814457 GCCAATGCAATAACCCGACA 59.186 50.000 0.00 0.00 37.47 4.35
1830 4921 0.814457 TGCCAATGCAATAACCCGAC 59.186 50.000 0.00 0.00 46.66 4.79
1831 4922 3.272925 TGCCAATGCAATAACCCGA 57.727 47.368 0.00 0.00 46.66 5.14
1841 4932 1.515081 AAATGCACTTGTGCCAATGC 58.485 45.000 21.01 11.56 38.59 3.56
1842 4933 3.850374 GCAAAAATGCACTTGTGCCAATG 60.850 43.478 21.01 13.84 34.41 2.82
1843 4934 2.291190 GCAAAAATGCACTTGTGCCAAT 59.709 40.909 21.01 7.84 34.41 3.16
1844 4935 1.669779 GCAAAAATGCACTTGTGCCAA 59.330 42.857 21.01 5.82 34.41 4.52
1845 4936 1.134461 AGCAAAAATGCACTTGTGCCA 60.134 42.857 18.96 10.86 37.25 4.92
1846 4937 1.585297 AGCAAAAATGCACTTGTGCC 58.415 45.000 18.96 2.18 37.25 5.01
1847 4938 3.678915 AAAGCAAAAATGCACTTGTGC 57.321 38.095 15.15 15.15 37.25 4.57
1848 4939 7.872163 TCTATAAAGCAAAAATGCACTTGTG 57.128 32.000 3.41 0.00 37.25 3.33
1849 4940 8.885494 TTTCTATAAAGCAAAAATGCACTTGT 57.115 26.923 3.41 0.00 37.25 3.16
1850 4941 9.749490 CATTTCTATAAAGCAAAAATGCACTTG 57.251 29.630 3.41 0.00 37.25 3.16
1851 4942 9.709495 TCATTTCTATAAAGCAAAAATGCACTT 57.291 25.926 3.41 0.00 37.28 3.16
1852 4943 9.143631 GTCATTTCTATAAAGCAAAAATGCACT 57.856 29.630 3.41 0.00 37.28 4.40
1853 4944 9.143631 AGTCATTTCTATAAAGCAAAAATGCAC 57.856 29.630 3.41 0.00 37.28 4.57
1924 5015 3.955771 TTCTACACAACGAAAAGGCAC 57.044 42.857 0.00 0.00 0.00 5.01
1925 5016 4.193090 TCTTTCTACACAACGAAAAGGCA 58.807 39.130 0.00 0.00 0.00 4.75
1926 5017 4.773510 CTCTTTCTACACAACGAAAAGGC 58.226 43.478 0.00 0.00 0.00 4.35
1927 5018 4.319549 GGCTCTTTCTACACAACGAAAAGG 60.320 45.833 0.00 0.00 0.00 3.11
1928 5019 4.511826 AGGCTCTTTCTACACAACGAAAAG 59.488 41.667 0.00 0.00 0.00 2.27
1929 5020 4.448210 AGGCTCTTTCTACACAACGAAAA 58.552 39.130 0.00 0.00 0.00 2.29
1930 5021 4.067972 AGGCTCTTTCTACACAACGAAA 57.932 40.909 0.00 0.00 0.00 3.46
1931 5022 3.746045 AGGCTCTTTCTACACAACGAA 57.254 42.857 0.00 0.00 0.00 3.85
1932 5023 3.746045 AAGGCTCTTTCTACACAACGA 57.254 42.857 0.00 0.00 0.00 3.85
1933 5024 4.511826 AGAAAAGGCTCTTTCTACACAACG 59.488 41.667 17.37 0.00 42.53 4.10
1934 5025 5.527582 TGAGAAAAGGCTCTTTCTACACAAC 59.472 40.000 18.28 9.91 43.97 3.32
1935 5026 5.527582 GTGAGAAAAGGCTCTTTCTACACAA 59.472 40.000 24.63 12.27 43.97 3.33
1936 5027 5.057149 GTGAGAAAAGGCTCTTTCTACACA 58.943 41.667 24.63 17.39 43.97 3.72
1937 5028 5.301555 AGTGAGAAAAGGCTCTTTCTACAC 58.698 41.667 23.67 23.67 43.97 2.90
1938 5029 5.552870 AGTGAGAAAAGGCTCTTTCTACA 57.447 39.130 18.28 15.52 43.97 2.74
1939 5030 6.227522 AGAAGTGAGAAAAGGCTCTTTCTAC 58.772 40.000 18.28 16.13 43.97 2.59
1940 5031 6.268847 AGAGAAGTGAGAAAAGGCTCTTTCTA 59.731 38.462 18.28 9.20 43.97 2.10
1941 5032 5.071653 AGAGAAGTGAGAAAAGGCTCTTTCT 59.928 40.000 18.30 18.30 46.06 2.52
1942 5033 5.304778 AGAGAAGTGAGAAAAGGCTCTTTC 58.695 41.667 11.69 11.69 35.91 2.62
1943 5034 5.303259 AGAGAAGTGAGAAAAGGCTCTTT 57.697 39.130 0.00 0.00 35.91 2.52
1944 5035 4.560513 CGAGAGAAGTGAGAAAAGGCTCTT 60.561 45.833 0.00 0.00 35.91 2.85
1945 5036 3.056891 CGAGAGAAGTGAGAAAAGGCTCT 60.057 47.826 0.00 0.00 35.91 4.09
1946 5037 3.057174 TCGAGAGAAGTGAGAAAAGGCTC 60.057 47.826 0.00 0.00 37.03 4.70
1947 5038 2.894126 TCGAGAGAAGTGAGAAAAGGCT 59.106 45.455 0.00 0.00 37.03 4.58
1948 5039 3.305398 TCGAGAGAAGTGAGAAAAGGC 57.695 47.619 0.00 0.00 37.03 4.35
1971 5062 6.992063 TTATGCCAAAAAGTCAAGCAAAAA 57.008 29.167 0.00 0.00 36.95 1.94
1972 5063 7.416022 CAATTATGCCAAAAAGTCAAGCAAAA 58.584 30.769 0.00 0.00 36.95 2.44
1973 5064 6.957150 CAATTATGCCAAAAAGTCAAGCAAA 58.043 32.000 0.00 0.00 36.95 3.68
1974 5065 6.542574 CAATTATGCCAAAAAGTCAAGCAA 57.457 33.333 0.00 0.00 36.95 3.91
1990 5081 3.936453 AGGCAAGCAAACATGCAATTATG 59.064 39.130 3.41 0.00 42.27 1.90
1991 5082 3.936453 CAGGCAAGCAAACATGCAATTAT 59.064 39.130 3.41 0.00 42.27 1.28
1992 5083 3.327626 CAGGCAAGCAAACATGCAATTA 58.672 40.909 3.41 0.00 42.27 1.40
1993 5084 2.147958 CAGGCAAGCAAACATGCAATT 58.852 42.857 3.41 0.00 42.27 2.32
1994 5085 1.609580 CCAGGCAAGCAAACATGCAAT 60.610 47.619 3.41 0.00 42.27 3.56
1995 5086 0.249953 CCAGGCAAGCAAACATGCAA 60.250 50.000 3.41 0.00 42.27 4.08
1996 5087 1.368209 CCAGGCAAGCAAACATGCA 59.632 52.632 3.41 0.00 42.27 3.96
1997 5088 2.030958 GCCAGGCAAGCAAACATGC 61.031 57.895 6.55 0.00 39.77 4.06
1998 5089 0.669318 CAGCCAGGCAAGCAAACATG 60.669 55.000 15.80 0.00 0.00 3.21
1999 5090 1.669440 CAGCCAGGCAAGCAAACAT 59.331 52.632 15.80 0.00 0.00 2.71
2000 5091 2.500714 CCAGCCAGGCAAGCAAACA 61.501 57.895 15.80 0.00 0.00 2.83
2001 5092 2.341176 CCAGCCAGGCAAGCAAAC 59.659 61.111 15.80 0.00 0.00 2.93
2002 5093 2.123338 ACCAGCCAGGCAAGCAAA 60.123 55.556 15.80 0.00 43.14 3.68
2003 5094 2.598394 GACCAGCCAGGCAAGCAA 60.598 61.111 15.80 0.00 43.14 3.91
2004 5095 4.666253 GGACCAGCCAGGCAAGCA 62.666 66.667 15.80 0.00 43.14 3.91
2006 5097 3.551496 TTCGGACCAGCCAGGCAAG 62.551 63.158 15.80 6.70 43.14 4.01
2007 5098 3.551496 CTTCGGACCAGCCAGGCAA 62.551 63.158 15.80 0.00 43.14 4.52
2008 5099 4.020617 CTTCGGACCAGCCAGGCA 62.021 66.667 15.80 0.00 43.14 4.75
2009 5100 3.959991 GACTTCGGACCAGCCAGGC 62.960 68.421 1.84 1.84 43.14 4.85
2010 5101 1.903877 ATGACTTCGGACCAGCCAGG 61.904 60.000 0.00 0.00 45.67 4.45
2011 5102 0.742281 CATGACTTCGGACCAGCCAG 60.742 60.000 0.00 0.00 35.94 4.85
2012 5103 1.191489 TCATGACTTCGGACCAGCCA 61.191 55.000 0.00 0.00 35.94 4.75
2013 5104 0.179000 ATCATGACTTCGGACCAGCC 59.821 55.000 0.00 0.00 0.00 4.85
2014 5105 2.890808 TATCATGACTTCGGACCAGC 57.109 50.000 0.00 0.00 0.00 4.85
2015 5106 5.050769 CGAAAATATCATGACTTCGGACCAG 60.051 44.000 17.08 0.00 36.21 4.00
2016 5107 4.808895 CGAAAATATCATGACTTCGGACCA 59.191 41.667 17.08 0.00 36.21 4.02
2017 5108 4.809426 ACGAAAATATCATGACTTCGGACC 59.191 41.667 23.64 3.24 42.33 4.46
2018 5109 5.968387 ACGAAAATATCATGACTTCGGAC 57.032 39.130 23.64 6.00 42.33 4.79
2019 5110 9.406828 CTATAACGAAAATATCATGACTTCGGA 57.593 33.333 23.64 16.21 42.33 4.55
2020 5111 9.406828 TCTATAACGAAAATATCATGACTTCGG 57.593 33.333 23.64 12.70 42.33 4.30
2077 5168 9.355916 GCCCCAATTTCTATCTCTACTTATTTT 57.644 33.333 0.00 0.00 0.00 1.82
2078 5169 8.728098 AGCCCCAATTTCTATCTCTACTTATTT 58.272 33.333 0.00 0.00 0.00 1.40
2079 5170 8.160106 CAGCCCCAATTTCTATCTCTACTTATT 58.840 37.037 0.00 0.00 0.00 1.40
2080 5171 7.293535 ACAGCCCCAATTTCTATCTCTACTTAT 59.706 37.037 0.00 0.00 0.00 1.73
2081 5172 6.615726 ACAGCCCCAATTTCTATCTCTACTTA 59.384 38.462 0.00 0.00 0.00 2.24
2082 5173 5.430089 ACAGCCCCAATTTCTATCTCTACTT 59.570 40.000 0.00 0.00 0.00 2.24
2083 5174 4.971924 ACAGCCCCAATTTCTATCTCTACT 59.028 41.667 0.00 0.00 0.00 2.57
2084 5175 5.059833 CACAGCCCCAATTTCTATCTCTAC 58.940 45.833 0.00 0.00 0.00 2.59
2085 5176 4.444876 GCACAGCCCCAATTTCTATCTCTA 60.445 45.833 0.00 0.00 0.00 2.43
2086 5177 3.686691 GCACAGCCCCAATTTCTATCTCT 60.687 47.826 0.00 0.00 0.00 3.10
2087 5178 2.620585 GCACAGCCCCAATTTCTATCTC 59.379 50.000 0.00 0.00 0.00 2.75
2088 5179 2.659428 GCACAGCCCCAATTTCTATCT 58.341 47.619 0.00 0.00 0.00 1.98
2089 5180 1.334869 CGCACAGCCCCAATTTCTATC 59.665 52.381 0.00 0.00 0.00 2.08
2090 5181 1.340991 ACGCACAGCCCCAATTTCTAT 60.341 47.619 0.00 0.00 0.00 1.98
2091 5182 0.037590 ACGCACAGCCCCAATTTCTA 59.962 50.000 0.00 0.00 0.00 2.10
2092 5183 0.037590 TACGCACAGCCCCAATTTCT 59.962 50.000 0.00 0.00 0.00 2.52
2093 5184 0.451783 CTACGCACAGCCCCAATTTC 59.548 55.000 0.00 0.00 0.00 2.17
2094 5185 1.595093 GCTACGCACAGCCCCAATTT 61.595 55.000 0.00 0.00 35.40 1.82
2095 5186 2.046285 GCTACGCACAGCCCCAATT 61.046 57.895 0.00 0.00 35.40 2.32
2096 5187 1.622607 TAGCTACGCACAGCCCCAAT 61.623 55.000 3.03 0.00 42.84 3.16
2097 5188 2.287274 TAGCTACGCACAGCCCCAA 61.287 57.895 3.03 0.00 42.84 4.12
2098 5189 2.682136 TAGCTACGCACAGCCCCA 60.682 61.111 3.03 0.00 42.84 4.96
2099 5190 2.202892 GTAGCTACGCACAGCCCC 60.203 66.667 8.40 0.00 42.84 5.80
2100 5191 2.202892 GGTAGCTACGCACAGCCC 60.203 66.667 17.48 0.00 42.84 5.19
2101 5192 1.810030 GTGGTAGCTACGCACAGCC 60.810 63.158 27.03 12.16 42.84 4.85
2102 5193 1.810030 GGTGGTAGCTACGCACAGC 60.810 63.158 30.06 22.56 42.12 4.40
2103 5194 0.175760 ATGGTGGTAGCTACGCACAG 59.824 55.000 30.06 0.00 32.57 3.66
2104 5195 0.108377 CATGGTGGTAGCTACGCACA 60.108 55.000 30.06 22.70 32.57 4.57
2105 5196 0.810031 CCATGGTGGTAGCTACGCAC 60.810 60.000 25.36 25.36 31.35 5.34
2106 5197 1.520192 CCATGGTGGTAGCTACGCA 59.480 57.895 17.48 13.36 31.35 5.24
2107 5198 1.227556 CCCATGGTGGTAGCTACGC 60.228 63.158 17.48 12.34 35.17 4.42
2108 5199 1.405872 TACCCATGGTGGTAGCTACG 58.594 55.000 17.48 3.88 39.91 3.51
2114 5205 1.502690 ATTCGCTACCCATGGTGGTA 58.497 50.000 11.73 5.85 39.91 3.25
2115 5206 0.623723 AATTCGCTACCCATGGTGGT 59.376 50.000 11.73 4.84 42.62 4.16
2116 5207 2.631160 TAATTCGCTACCCATGGTGG 57.369 50.000 11.73 2.17 36.19 4.61
2117 5208 4.023193 GGAAATAATTCGCTACCCATGGTG 60.023 45.833 11.73 4.77 35.27 4.17
2118 5209 4.142038 GGAAATAATTCGCTACCCATGGT 58.858 43.478 11.73 1.30 36.71 3.55
2119 5210 3.188460 CGGAAATAATTCGCTACCCATGG 59.812 47.826 4.14 4.14 36.36 3.66
2120 5211 3.813166 ACGGAAATAATTCGCTACCCATG 59.187 43.478 0.00 0.00 36.36 3.66
2121 5212 4.081322 ACGGAAATAATTCGCTACCCAT 57.919 40.909 0.00 0.00 36.36 4.00
2122 5213 3.547054 ACGGAAATAATTCGCTACCCA 57.453 42.857 0.00 0.00 36.36 4.51
2123 5214 3.624410 ACAACGGAAATAATTCGCTACCC 59.376 43.478 0.00 0.00 36.36 3.69
2124 5215 4.870221 ACAACGGAAATAATTCGCTACC 57.130 40.909 0.00 0.00 36.36 3.18
2125 5216 6.997222 ACTAACAACGGAAATAATTCGCTAC 58.003 36.000 0.00 0.00 36.36 3.58
2126 5217 8.700722 TTACTAACAACGGAAATAATTCGCTA 57.299 30.769 0.00 0.00 36.36 4.26
2127 5218 7.599630 TTACTAACAACGGAAATAATTCGCT 57.400 32.000 0.00 0.00 36.36 4.93
2128 5219 8.831000 ATTTACTAACAACGGAAATAATTCGC 57.169 30.769 0.00 0.00 36.36 4.70
2131 5222 9.915629 TGCAATTTACTAACAACGGAAATAATT 57.084 25.926 0.00 0.00 0.00 1.40
2132 5223 9.915629 TTGCAATTTACTAACAACGGAAATAAT 57.084 25.926 0.00 0.00 0.00 1.28
2133 5224 9.745880 TTTGCAATTTACTAACAACGGAAATAA 57.254 25.926 0.00 0.00 0.00 1.40
2134 5225 9.400638 CTTTGCAATTTACTAACAACGGAAATA 57.599 29.630 0.00 0.00 0.00 1.40
2135 5226 7.923878 ACTTTGCAATTTACTAACAACGGAAAT 59.076 29.630 0.00 0.00 0.00 2.17
2136 5227 7.221067 CACTTTGCAATTTACTAACAACGGAAA 59.779 33.333 0.00 0.00 0.00 3.13
2137 5228 6.693545 CACTTTGCAATTTACTAACAACGGAA 59.306 34.615 0.00 0.00 0.00 4.30
2138 5229 6.038382 TCACTTTGCAATTTACTAACAACGGA 59.962 34.615 0.00 0.00 0.00 4.69
2139 5230 6.202937 TCACTTTGCAATTTACTAACAACGG 58.797 36.000 0.00 0.00 0.00 4.44
2140 5231 7.129622 TCTCACTTTGCAATTTACTAACAACG 58.870 34.615 0.00 0.00 0.00 4.10
2141 5232 8.743099 GTTCTCACTTTGCAATTTACTAACAAC 58.257 33.333 0.00 0.00 0.00 3.32
2142 5233 8.682710 AGTTCTCACTTTGCAATTTACTAACAA 58.317 29.630 0.00 0.00 0.00 2.83
2143 5234 8.220755 AGTTCTCACTTTGCAATTTACTAACA 57.779 30.769 0.00 0.00 0.00 2.41
2146 5237 9.555727 ACTAAGTTCTCACTTTGCAATTTACTA 57.444 29.630 0.00 0.00 40.66 1.82
2147 5238 8.451908 ACTAAGTTCTCACTTTGCAATTTACT 57.548 30.769 0.00 0.00 40.66 2.24
2148 5239 7.803659 GGACTAAGTTCTCACTTTGCAATTTAC 59.196 37.037 0.00 0.00 40.66 2.01
2149 5240 7.500892 TGGACTAAGTTCTCACTTTGCAATTTA 59.499 33.333 0.00 0.00 40.66 1.40
2150 5241 6.321181 TGGACTAAGTTCTCACTTTGCAATTT 59.679 34.615 0.00 0.00 40.66 1.82
2151 5242 5.827797 TGGACTAAGTTCTCACTTTGCAATT 59.172 36.000 0.00 0.00 40.66 2.32
2171 5262 6.183360 TGCCAAAACGAATGTTCTATATGGAC 60.183 38.462 0.00 0.00 37.31 4.02
2252 5348 6.266168 ACGCTCTAAGAGATATGAGGATTG 57.734 41.667 0.00 0.00 0.00 2.67
2260 5356 5.182380 GCTCCACTTACGCTCTAAGAGATAT 59.818 44.000 0.00 0.00 0.00 1.63
2271 5367 1.246056 TACGGTGCTCCACTTACGCT 61.246 55.000 5.52 0.00 34.40 5.07
2272 5368 0.388907 TTACGGTGCTCCACTTACGC 60.389 55.000 5.52 0.00 34.40 4.42
2319 5417 6.785488 AACAATATGTACACAGCGGATATG 57.215 37.500 0.00 0.00 0.00 1.78
2326 5424 8.496872 AAAAACGTTAACAATATGTACACAGC 57.503 30.769 0.00 0.00 0.00 4.40
2355 5453 6.068010 AGACAAGGACACATGGTATCAAAAA 58.932 36.000 0.00 0.00 0.00 1.94
2402 5501 3.754323 AGTTGTCTGTGAACGGAAACAAA 59.246 39.130 14.29 0.10 32.23 2.83
2410 5509 7.792508 GTGATTTAGTAAAGTTGTCTGTGAACG 59.207 37.037 1.21 0.00 0.00 3.95
2516 5615 6.823689 GCTCAGGGACTTGAAGAATAAACATA 59.176 38.462 0.00 0.00 34.60 2.29
2586 5685 9.914131 GTAAACTAAGAATGGCTTTTCAGATTT 57.086 29.630 4.09 0.00 38.05 2.17
2664 5763 3.822735 TCAAATCAGTTTCTCCTTGCCTG 59.177 43.478 0.00 0.00 0.00 4.85
2677 5776 7.313740 AGATAGATAGTGGCATCAAATCAGT 57.686 36.000 0.00 0.00 0.00 3.41
2745 5844 0.035881 CCTCAGCTCCAGCAGTTTGA 59.964 55.000 0.48 0.00 45.16 2.69
2787 5886 1.007734 CACAGTGCAGCAAAGGCAG 60.008 57.895 0.00 0.00 42.85 4.85
2915 6014 5.068198 CACAGGATTTCTTGATTATGGTGGG 59.932 44.000 0.00 0.00 0.00 4.61
2933 6032 6.127225 CCTCAAGAGAATTACATCTCACAGGA 60.127 42.308 7.04 0.00 46.73 3.86
2954 6053 4.447138 AGTTGGGTGATGTTTAACCTCA 57.553 40.909 0.00 0.00 36.64 3.86
3094 6194 9.013229 ACATCATTAAAAACTGTATCTTCTGCA 57.987 29.630 0.00 0.00 0.00 4.41
3286 6386 8.595533 CATAATTAGACACACATGACTACACAC 58.404 37.037 0.00 0.00 33.62 3.82
3339 6439 8.630917 CAAGAAATTAGCTCCTCATCAATCATT 58.369 33.333 0.00 0.00 0.00 2.57
3343 6443 7.951347 AACAAGAAATTAGCTCCTCATCAAT 57.049 32.000 0.00 0.00 0.00 2.57
3345 6445 7.624549 AGTAACAAGAAATTAGCTCCTCATCA 58.375 34.615 0.00 0.00 0.00 3.07
3346 6446 8.394121 CAAGTAACAAGAAATTAGCTCCTCATC 58.606 37.037 0.00 0.00 0.00 2.92
3347 6447 7.148171 GCAAGTAACAAGAAATTAGCTCCTCAT 60.148 37.037 0.00 0.00 0.00 2.90
3633 6737 8.498054 ACCATATGAAAGATAGTGTTCTGTTG 57.502 34.615 3.65 0.00 0.00 3.33
3746 6850 6.319405 TGCGAGTAACATCTACCATAGTTACA 59.681 38.462 14.39 0.00 45.26 2.41
3830 6934 7.887996 TTTCATTATGGTTGAACAAATCAGC 57.112 32.000 0.00 0.00 39.77 4.26
3904 7008 8.703604 TCTCTCAATGCTAGTAAACACAATAC 57.296 34.615 0.00 0.00 0.00 1.89
4076 7183 8.682710 TGTCCACAATTAACAAATAGCTAATCC 58.317 33.333 0.00 0.00 0.00 3.01
4094 7201 3.392947 TCCCAAAGAGTACATGTCCACAA 59.607 43.478 0.00 0.00 0.00 3.33
4130 7238 8.492415 TTACAAGTATATCAGGAGGCATAAGT 57.508 34.615 0.00 0.00 0.00 2.24
4220 7329 9.528489 ACTGTTTAGTGATTGTAAATACCCAAT 57.472 29.630 0.00 0.00 35.34 3.16
4255 7364 7.764443 CAGGGAAAATAAAGAACGATCTCTACA 59.236 37.037 0.00 0.00 33.77 2.74
4281 7412 9.631452 AATTTGAGCAACTAGAGCTAAATTTTC 57.369 29.630 13.06 2.55 43.58 2.29
4315 7446 9.487790 TGAAATCAAATTTCCTTTATGGTCAAC 57.512 29.630 9.31 0.00 46.18 3.18
4417 7548 1.064505 GCATGGTCATGGTCATGTTCG 59.935 52.381 21.50 5.85 41.83 3.95
4426 7557 2.114670 GTCGTGGGCATGGTCATGG 61.115 63.158 12.23 0.00 39.16 3.66
4437 7586 2.125673 GGTGATCGTGGTCGTGGG 60.126 66.667 0.00 0.00 38.33 4.61
4442 7591 2.602257 TGATGATGGTGATCGTGGTC 57.398 50.000 0.00 0.00 0.00 4.02
4443 7592 2.435437 TCATGATGATGGTGATCGTGGT 59.565 45.455 0.00 0.00 37.42 4.16
4444 7593 3.116079 TCATGATGATGGTGATCGTGG 57.884 47.619 0.00 0.00 37.42 4.94
4445 7594 4.923264 GATCATGATGATGGTGATCGTG 57.077 45.455 14.30 0.00 37.20 4.35
4686 7837 9.326413 CTCTGTCCCATAATATAAGACGTTTTT 57.674 33.333 0.00 0.00 0.00 1.94
4687 7838 7.441458 GCTCTGTCCCATAATATAAGACGTTTT 59.559 37.037 0.00 0.00 0.00 2.43
4688 7839 6.929606 GCTCTGTCCCATAATATAAGACGTTT 59.070 38.462 0.00 0.00 0.00 3.60
4689 7840 6.456501 GCTCTGTCCCATAATATAAGACGTT 58.543 40.000 0.00 0.00 0.00 3.99
4690 7841 5.335740 CGCTCTGTCCCATAATATAAGACGT 60.336 44.000 0.00 0.00 0.00 4.34
4691 7842 5.096169 CGCTCTGTCCCATAATATAAGACG 58.904 45.833 0.00 0.00 0.00 4.18
4692 7843 6.071840 ACTCGCTCTGTCCCATAATATAAGAC 60.072 42.308 0.00 0.00 0.00 3.01
4693 7844 6.010850 ACTCGCTCTGTCCCATAATATAAGA 58.989 40.000 0.00 0.00 0.00 2.10
4694 7845 6.274157 ACTCGCTCTGTCCCATAATATAAG 57.726 41.667 0.00 0.00 0.00 1.73
4695 7846 6.717997 TGTACTCGCTCTGTCCCATAATATAA 59.282 38.462 0.00 0.00 0.00 0.98
4696 7847 6.243148 TGTACTCGCTCTGTCCCATAATATA 58.757 40.000 0.00 0.00 0.00 0.86
4697 7848 5.077564 TGTACTCGCTCTGTCCCATAATAT 58.922 41.667 0.00 0.00 0.00 1.28
4698 7849 4.466827 TGTACTCGCTCTGTCCCATAATA 58.533 43.478 0.00 0.00 0.00 0.98
4699 7850 3.296854 TGTACTCGCTCTGTCCCATAAT 58.703 45.455 0.00 0.00 0.00 1.28
4700 7851 2.730382 TGTACTCGCTCTGTCCCATAA 58.270 47.619 0.00 0.00 0.00 1.90
4701 7852 2.430248 TGTACTCGCTCTGTCCCATA 57.570 50.000 0.00 0.00 0.00 2.74
4702 7853 1.781786 ATGTACTCGCTCTGTCCCAT 58.218 50.000 0.00 0.00 0.00 4.00
4703 7854 1.557099 AATGTACTCGCTCTGTCCCA 58.443 50.000 0.00 0.00 0.00 4.37
4704 7855 2.674796 AAATGTACTCGCTCTGTCCC 57.325 50.000 0.00 0.00 0.00 4.46
4705 7856 7.371936 AGATATAAAATGTACTCGCTCTGTCC 58.628 38.462 0.00 0.00 0.00 4.02
4706 7857 8.804688 AAGATATAAAATGTACTCGCTCTGTC 57.195 34.615 0.00 0.00 0.00 3.51
4707 7858 8.634444 AGAAGATATAAAATGTACTCGCTCTGT 58.366 33.333 0.00 0.00 0.00 3.41
4708 7859 9.123709 GAGAAGATATAAAATGTACTCGCTCTG 57.876 37.037 0.00 0.00 0.00 3.35
4709 7860 8.851145 TGAGAAGATATAAAATGTACTCGCTCT 58.149 33.333 0.00 0.00 0.00 4.09
4710 7861 9.464714 TTGAGAAGATATAAAATGTACTCGCTC 57.535 33.333 0.00 0.00 0.00 5.03
4711 7862 9.469807 CTTGAGAAGATATAAAATGTACTCGCT 57.530 33.333 0.00 0.00 0.00 4.93
4712 7863 9.464714 TCTTGAGAAGATATAAAATGTACTCGC 57.535 33.333 0.00 0.00 31.20 5.03
4787 7939 4.767928 TGTTTGTCCCAATATACACAACCC 59.232 41.667 0.00 0.00 0.00 4.11
4926 8078 7.817962 GCTAGAGTAACAAATACCTGAAAGACA 59.182 37.037 0.00 0.00 34.89 3.41
4992 8152 8.048534 AGACAAGACATGATTAGTTTCCATTG 57.951 34.615 0.00 0.00 0.00 2.82
5014 8174 4.745620 GTGTCCTTTCACAAGTCACTAGAC 59.254 45.833 0.00 0.00 40.11 2.59
5084 8244 6.425721 AGCTGCTTGTTTTATAAACAGACGTA 59.574 34.615 13.94 0.00 0.00 3.57
5086 8246 5.689819 AGCTGCTTGTTTTATAAACAGACG 58.310 37.500 13.94 0.00 0.00 4.18
5117 8277 6.881065 AGCAGAGCAAATAAGTACATGAAAGA 59.119 34.615 0.00 0.00 0.00 2.52
5127 8287 9.110502 GGTTTACTAATAGCAGAGCAAATAAGT 57.889 33.333 0.00 0.00 0.00 2.24
5234 8397 2.287368 GGAAAAGTAGTGGTTGTTGGCG 60.287 50.000 0.00 0.00 0.00 5.69
5255 8418 5.513267 GGGTAGGTTTGGCTATTCCTCTATG 60.513 48.000 0.00 0.00 35.26 2.23
5296 8461 1.999048 ACACAAACGAACACGACTGA 58.001 45.000 0.00 0.00 0.00 3.41
5379 8544 2.927553 ACGTAGGTACACCAACGATC 57.072 50.000 13.21 0.00 38.89 3.69
5418 8583 9.077885 AGTTAAAGAACCATTAAGATCAAGCAA 57.922 29.630 0.00 0.00 36.08 3.91
5446 8611 8.245195 AGAAAAGGATCTTAGATCAGGAGTAC 57.755 38.462 21.89 4.71 0.00 2.73
5463 8628 5.623956 TCAGTAGTTGGACAAGAAAAGGA 57.376 39.130 0.00 0.00 0.00 3.36
5470 8635 7.340122 TGATCTAGATCAGTAGTTGGACAAG 57.660 40.000 27.93 0.00 42.42 3.16
5545 8714 9.679661 TCATAGGCTTATACAAACAATCTTCAA 57.320 29.630 0.00 0.00 0.00 2.69
5594 8763 5.168569 CCTAGCTAATTGTTCGTTCACTCA 58.831 41.667 0.00 0.00 0.00 3.41
5595 8764 5.062308 CACCTAGCTAATTGTTCGTTCACTC 59.938 44.000 0.00 0.00 0.00 3.51
5597 8766 4.689345 ACACCTAGCTAATTGTTCGTTCAC 59.311 41.667 0.00 0.00 0.00 3.18
5600 8769 5.061179 ACAACACCTAGCTAATTGTTCGTT 58.939 37.500 14.08 3.38 29.30 3.85
5624 8796 2.817839 GCTTAACAAGGGAGAGGGCAAA 60.818 50.000 0.00 0.00 0.00 3.68
5628 8800 0.902531 TCGCTTAACAAGGGAGAGGG 59.097 55.000 1.91 0.00 44.37 4.30
5635 8807 1.997606 CGGTTAGGTCGCTTAACAAGG 59.002 52.381 11.70 1.13 33.66 3.61
5734 8906 0.168788 CAATCTTGTTGATGCGCGGT 59.831 50.000 8.83 0.00 35.21 5.68
5907 9079 6.492254 ACAGTTCAATAACGGTTTCAGTTTC 58.508 36.000 0.00 0.00 40.51 2.78
5914 9086 4.121317 TCGTGACAGTTCAATAACGGTTT 58.879 39.130 0.00 0.00 42.93 3.27
5931 9103 2.554806 ATACATCTCGCGTTTCGTGA 57.445 45.000 5.77 5.37 44.12 4.35
5936 9108 7.921214 CCCAATCTATATATACATCTCGCGTTT 59.079 37.037 5.77 0.00 0.00 3.60
6030 9202 1.661178 GCAAGTCACAGTGCAACATCG 60.661 52.381 0.00 0.00 41.43 3.84
6066 9238 4.573900 AGCAATTCCTCAAGTCACAGTAG 58.426 43.478 0.00 0.00 0.00 2.57
6090 9262 7.970384 TGCTATGTAAACTTTTCGGACTTATG 58.030 34.615 0.00 0.00 0.00 1.90
6091 9263 8.612619 CATGCTATGTAAACTTTTCGGACTTAT 58.387 33.333 0.00 0.00 0.00 1.73
6108 9280 5.431420 TTTCAACGAAACACATGCTATGT 57.569 34.783 0.00 0.00 46.22 2.29
6144 9316 7.390823 TCAGCCGTATTCAGCCATATTTATAA 58.609 34.615 0.00 0.00 0.00 0.98
6147 9320 5.222079 TCAGCCGTATTCAGCCATATTTA 57.778 39.130 0.00 0.00 0.00 1.40
6148 9321 4.085357 TCAGCCGTATTCAGCCATATTT 57.915 40.909 0.00 0.00 0.00 1.40
6149 9322 3.769739 TCAGCCGTATTCAGCCATATT 57.230 42.857 0.00 0.00 0.00 1.28
6150 9323 3.071602 ACTTCAGCCGTATTCAGCCATAT 59.928 43.478 0.00 0.00 0.00 1.78
6151 9324 2.434336 ACTTCAGCCGTATTCAGCCATA 59.566 45.455 0.00 0.00 0.00 2.74
6152 9325 1.210478 ACTTCAGCCGTATTCAGCCAT 59.790 47.619 0.00 0.00 0.00 4.40
6153 9326 0.613260 ACTTCAGCCGTATTCAGCCA 59.387 50.000 0.00 0.00 0.00 4.75
6154 9327 1.398390 CAACTTCAGCCGTATTCAGCC 59.602 52.381 0.00 0.00 0.00 4.85
6155 9328 1.398390 CCAACTTCAGCCGTATTCAGC 59.602 52.381 0.00 0.00 0.00 4.26
6156 9329 2.699954 ACCAACTTCAGCCGTATTCAG 58.300 47.619 0.00 0.00 0.00 3.02
6157 9330 2.851263 ACCAACTTCAGCCGTATTCA 57.149 45.000 0.00 0.00 0.00 2.57
6158 9331 5.989777 ACATATACCAACTTCAGCCGTATTC 59.010 40.000 0.00 0.00 0.00 1.75
6260 9460 5.541845 CAATTCCTCAAGTCACAGTAGTCA 58.458 41.667 0.00 0.00 0.00 3.41
6294 9501 3.198068 GCATGCTATGGAGACTTTTCGA 58.802 45.455 11.37 0.00 0.00 3.71
6375 9582 3.390135 CTCCGCTACTGTTGTTTCAGAA 58.610 45.455 0.65 0.00 38.63 3.02
6390 9597 1.531840 ATATCTCGTGCCCTCCGCT 60.532 57.895 0.00 0.00 38.78 5.52
6393 9600 0.605589 CTCCATATCTCGTGCCCTCC 59.394 60.000 0.00 0.00 0.00 4.30
6397 9604 1.067495 GTAGCCTCCATATCTCGTGCC 60.067 57.143 0.00 0.00 0.00 5.01
6402 9609 4.325084 ACCCTAGTAGCCTCCATATCTC 57.675 50.000 0.00 0.00 0.00 2.75
6403 9610 4.768807 AACCCTAGTAGCCTCCATATCT 57.231 45.455 0.00 0.00 0.00 1.98
6448 9655 1.742880 CACGCATCTGACCACCCAG 60.743 63.158 0.00 0.00 35.55 4.45
6457 9664 1.736126 ACTCATTGAAGCACGCATCTG 59.264 47.619 0.00 0.00 0.00 2.90
6465 9672 2.880268 CAGTTCACCACTCATTGAAGCA 59.120 45.455 0.00 0.00 32.40 3.91
6469 9676 2.054021 TCCCAGTTCACCACTCATTGA 58.946 47.619 0.00 0.00 30.92 2.57
6480 9687 1.883638 GCAGATGCAGTTCCCAGTTCA 60.884 52.381 0.00 0.00 41.59 3.18
6493 9700 4.563337 ACATATTCATGTGTGCAGATGC 57.437 40.909 4.66 0.00 43.89 3.91
6524 9731 6.584563 GCTATTTCTCGATATGTGGTTCTCTC 59.415 42.308 0.00 0.00 0.00 3.20
6525 9732 6.451393 GCTATTTCTCGATATGTGGTTCTCT 58.549 40.000 0.00 0.00 0.00 3.10
6531 9738 2.668457 GGCGCTATTTCTCGATATGTGG 59.332 50.000 7.64 0.00 0.00 4.17
6532 9739 3.579709 AGGCGCTATTTCTCGATATGTG 58.420 45.455 7.64 0.00 0.00 3.21
6535 9742 4.218635 TCTCAAGGCGCTATTTCTCGATAT 59.781 41.667 7.64 0.00 0.00 1.63
6536 9743 3.568430 TCTCAAGGCGCTATTTCTCGATA 59.432 43.478 7.64 0.00 0.00 2.92
6577 9784 3.192633 TGTGTGCAGATAGACATACGTGT 59.807 43.478 0.00 0.00 42.49 4.49
6578 9785 3.769536 TGTGTGCAGATAGACATACGTG 58.230 45.455 0.00 0.00 31.25 4.49
6580 9787 4.610945 TCATGTGTGCAGATAGACATACG 58.389 43.478 0.00 0.00 33.35 3.06
6586 9793 6.600427 ACAATCATTTCATGTGTGCAGATAGA 59.400 34.615 0.00 0.00 0.00 1.98
6588 9795 6.374894 TGACAATCATTTCATGTGTGCAGATA 59.625 34.615 0.00 0.00 0.00 1.98
6594 9801 6.361481 GTCTTGTGACAATCATTTCATGTGTG 59.639 38.462 0.00 0.00 42.48 3.82
6621 9829 3.648067 TCCAGTCATGTTGTCTTTCTCCT 59.352 43.478 0.00 0.00 0.00 3.69
6648 9857 6.085555 TCCGATATGAATGTTGTAGGAGTC 57.914 41.667 0.00 0.00 0.00 3.36
6649 9858 6.281405 GTTCCGATATGAATGTTGTAGGAGT 58.719 40.000 0.00 0.00 0.00 3.85
6680 9889 0.249868 TTGAGGTGAGCAGACAACGG 60.250 55.000 0.00 0.00 32.17 4.44
6684 9893 2.250924 TCTCATTGAGGTGAGCAGACA 58.749 47.619 13.59 0.00 44.15 3.41
6685 9894 3.196463 CATCTCATTGAGGTGAGCAGAC 58.804 50.000 20.19 0.00 42.86 3.51
6686 9895 2.836372 ACATCTCATTGAGGTGAGCAGA 59.164 45.455 29.18 2.45 42.86 4.26
6698 9907 2.240414 TGCCATGGTCAGACATCTCATT 59.760 45.455 14.67 0.00 0.00 2.57
6699 9908 1.841919 TGCCATGGTCAGACATCTCAT 59.158 47.619 14.67 0.00 0.00 2.90
6720 9929 2.503765 TGACTTGTGAGGAAACCAGTCA 59.496 45.455 7.05 7.05 45.48 3.41
6739 9948 1.071542 TCATTCGGACTTGGCTTGTGA 59.928 47.619 0.00 0.00 0.00 3.58
6740 9949 1.466167 CTCATTCGGACTTGGCTTGTG 59.534 52.381 0.00 0.00 0.00 3.33
6741 9950 1.072331 ACTCATTCGGACTTGGCTTGT 59.928 47.619 0.00 0.00 0.00 3.16
6742 9951 1.813513 ACTCATTCGGACTTGGCTTG 58.186 50.000 0.00 0.00 0.00 4.01
6743 9952 2.427506 GAACTCATTCGGACTTGGCTT 58.572 47.619 0.00 0.00 0.00 4.35
6744 9953 1.339151 GGAACTCATTCGGACTTGGCT 60.339 52.381 0.00 0.00 35.48 4.75
6745 9954 1.087501 GGAACTCATTCGGACTTGGC 58.912 55.000 0.00 0.00 35.48 4.52
6753 9962 6.393171 TGATCTGCTATATGGAACTCATTCG 58.607 40.000 0.00 0.00 37.30 3.34
6756 9965 8.819845 TGTATTGATCTGCTATATGGAACTCAT 58.180 33.333 0.00 0.00 39.78 2.90
6762 9971 6.438425 TCAGCTGTATTGATCTGCTATATGGA 59.562 38.462 14.67 0.00 37.85 3.41
6765 9974 7.178097 TCACTCAGCTGTATTGATCTGCTATAT 59.822 37.037 14.67 0.00 37.85 0.86
6786 9995 1.249407 AGACCAGGAACGTCTCACTC 58.751 55.000 0.00 0.00 35.68 3.51
6794 10003 2.418746 CCTATGTTGGAGACCAGGAACG 60.419 54.545 0.00 0.00 33.81 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.