Multiple sequence alignment - TraesCS6B01G402300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G402300 chr6B 100.000 4364 0 0 1 4364 678627263 678631626 0.000000e+00 8059
1 TraesCS6B01G402300 chr6B 88.406 138 14 2 3859 3995 678630961 678631097 9.710000e-37 165
2 TraesCS6B01G402300 chr6D 90.955 1769 102 27 1970 3695 447827824 447829577 0.000000e+00 2327
3 TraesCS6B01G402300 chr6D 90.064 1399 78 26 604 1968 447826279 447827650 0.000000e+00 1757
4 TraesCS6B01G402300 chr6D 91.250 160 9 5 3695 3851 351933210 351933053 3.420000e-51 213
5 TraesCS6B01G402300 chr6A 91.111 1755 93 33 242 1968 594404696 594406415 0.000000e+00 2318
6 TraesCS6B01G402300 chr6A 89.243 1004 67 19 2467 3443 594407034 594408023 0.000000e+00 1218
7 TraesCS6B01G402300 chr6A 91.264 435 22 9 1968 2394 594406608 594407034 2.930000e-161 579
8 TraesCS6B01G402300 chr6A 90.821 207 12 5 3489 3695 594408019 594408218 2.000000e-68 270
9 TraesCS6B01G402300 chr3B 81.076 539 60 17 3695 4220 654645692 654645183 4.090000e-105 392
10 TraesCS6B01G402300 chr3B 82.383 386 47 14 3850 4220 654645095 654644716 2.530000e-82 316
11 TraesCS6B01G402300 chr3B 89.441 161 12 4 3694 3851 672401650 672401492 9.570000e-47 198
12 TraesCS6B01G402300 chr4D 85.399 363 37 5 3859 4208 11147235 11147594 3.210000e-96 363
13 TraesCS6B01G402300 chr7A 84.677 372 45 2 3859 4218 498321624 498321253 1.150000e-95 361
14 TraesCS6B01G402300 chr7A 83.186 226 23 8 3859 4069 692929539 692929764 4.450000e-45 193
15 TraesCS6B01G402300 chr7A 80.753 239 30 9 3847 4069 194793925 194793687 5.800000e-39 172
16 TraesCS6B01G402300 chr1D 84.699 366 44 6 3857 4210 198439948 198439583 5.370000e-94 355
17 TraesCS6B01G402300 chr7D 84.511 368 44 2 3859 4214 26561397 26561763 6.940000e-93 351
18 TraesCS6B01G402300 chr7D 83.740 369 45 5 3860 4215 129975456 129975822 6.990000e-88 335
19 TraesCS6B01G402300 chr7D 78.689 244 34 7 3843 4069 189248416 189248658 3.520000e-31 147
20 TraesCS6B01G402300 chr2D 84.367 371 45 4 3859 4216 75563909 75563539 6.940000e-93 351
21 TraesCS6B01G402300 chr5D 83.051 354 38 10 3859 4212 34041067 34041398 7.090000e-78 302
22 TraesCS6B01G402300 chr5D 82.231 242 25 6 3844 4069 498658444 498658683 4.450000e-45 193
23 TraesCS6B01G402300 chr4A 80.720 389 49 10 3699 4069 665693164 665693544 3.320000e-71 279
24 TraesCS6B01G402300 chr5A 82.581 310 36 12 3694 3995 38154438 38154737 1.560000e-64 257
25 TraesCS6B01G402300 chr5A 80.172 232 29 11 3853 4069 397507017 397507246 1.620000e-34 158
26 TraesCS6B01G402300 chr5B 79.076 368 39 10 3695 4048 436179073 436178730 7.350000e-53 219
27 TraesCS6B01G402300 chr5B 89.697 165 14 3 3688 3851 369336235 369336073 1.590000e-49 207
28 TraesCS6B01G402300 chr7B 89.937 159 13 3 3694 3851 709917561 709917717 7.400000e-48 202
29 TraesCS6B01G402300 chr7B 85.714 147 16 3 3851 3995 498577792 498577935 2.720000e-32 150
30 TraesCS6B01G402300 chr3A 89.441 161 11 5 3695 3851 12612846 12613004 9.570000e-47 198
31 TraesCS6B01G402300 chr1A 88.889 162 13 5 3693 3851 297047142 297046983 1.240000e-45 195


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G402300 chr6B 678627263 678631626 4363 False 4112.00 8059 94.20300 1 4364 2 chr6B.!!$F1 4363
1 TraesCS6B01G402300 chr6D 447826279 447829577 3298 False 2042.00 2327 90.50950 604 3695 2 chr6D.!!$F1 3091
2 TraesCS6B01G402300 chr6A 594404696 594408218 3522 False 1096.25 2318 90.60975 242 3695 4 chr6A.!!$F1 3453
3 TraesCS6B01G402300 chr3B 654644716 654645692 976 True 354.00 392 81.72950 3695 4220 2 chr3B.!!$R2 525

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
197 198 0.038618 AAGAAAATTGGCGGCCGAAC 60.039 50.0 33.48 21.72 0.00 3.95 F
270 271 0.179073 GCTCCGCTCAAGCATTCCTA 60.179 55.0 2.50 0.00 42.21 2.94 F
696 701 0.527817 GAACAGGTCATACGGGCGAG 60.528 60.0 0.00 0.00 0.00 5.03 F
1474 1506 0.804544 TAAGAATGCGCGACGGAAGG 60.805 55.0 12.10 0.00 0.00 3.46 F
1892 1930 0.804989 CTTTCTAGCCAAGGCCAACG 59.195 55.0 5.01 0.00 43.17 4.10 F
3182 3457 0.168348 GCTGCTCATGACTTGCACAG 59.832 55.0 4.13 1.50 33.52 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1685 1722 1.078567 CTCCACTGGAAGAGGCAGC 60.079 63.158 0.00 0.0 45.13 5.25 R
2053 2293 2.355756 CCATTTCTGTAATCCGCACCAG 59.644 50.000 0.00 0.0 0.00 4.00 R
2568 2818 0.034896 ACTGCCCTTGACTTACACGG 59.965 55.000 0.00 0.0 37.61 4.94 R
2913 3164 0.312729 CCGGTTGGCTTTGGTTGTAC 59.687 55.000 0.00 0.0 0.00 2.90 R
3324 3610 0.320334 TTGCGCGGAACATGAGAAGA 60.320 50.000 9.68 0.0 0.00 2.87 R
4311 5121 0.174162 ATGTCCGTTACTACACCGGC 59.826 55.000 0.00 0.0 41.46 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.499403 AGCCAACAAAGATATAGAAAGAAGAC 57.501 34.615 0.00 0.00 0.00 3.01
26 27 8.103305 AGCCAACAAAGATATAGAAAGAAGACA 58.897 33.333 0.00 0.00 0.00 3.41
27 28 8.730680 GCCAACAAAGATATAGAAAGAAGACAA 58.269 33.333 0.00 0.00 0.00 3.18
54 55 7.575414 AAAACAAACAAAGAAACCCAAAAGT 57.425 28.000 0.00 0.00 0.00 2.66
55 56 8.678593 AAAACAAACAAAGAAACCCAAAAGTA 57.321 26.923 0.00 0.00 0.00 2.24
56 57 8.678593 AAACAAACAAAGAAACCCAAAAGTAA 57.321 26.923 0.00 0.00 0.00 2.24
57 58 8.678593 AACAAACAAAGAAACCCAAAAGTAAA 57.321 26.923 0.00 0.00 0.00 2.01
58 59 8.678593 ACAAACAAAGAAACCCAAAAGTAAAA 57.321 26.923 0.00 0.00 0.00 1.52
59 60 9.121658 ACAAACAAAGAAACCCAAAAGTAAAAA 57.878 25.926 0.00 0.00 0.00 1.94
193 194 2.162319 TTTGAAGAAAATTGGCGGCC 57.838 45.000 13.32 13.32 0.00 6.13
194 195 0.038709 TTGAAGAAAATTGGCGGCCG 60.039 50.000 24.05 24.05 0.00 6.13
195 196 0.891449 TGAAGAAAATTGGCGGCCGA 60.891 50.000 33.48 12.25 0.00 5.54
196 197 0.242555 GAAGAAAATTGGCGGCCGAA 59.757 50.000 33.48 16.72 0.00 4.30
197 198 0.038618 AAGAAAATTGGCGGCCGAAC 60.039 50.000 33.48 21.72 0.00 3.95
198 199 1.445410 GAAAATTGGCGGCCGAACC 60.445 57.895 33.48 22.77 0.00 3.62
199 200 2.148558 GAAAATTGGCGGCCGAACCA 62.149 55.000 33.48 25.45 39.03 3.67
200 201 2.153547 AAAATTGGCGGCCGAACCAG 62.154 55.000 33.48 0.00 39.03 4.00
201 202 3.860930 AATTGGCGGCCGAACCAGT 62.861 57.895 33.48 21.61 39.03 4.00
212 213 2.883572 GAACCAGTCGAGCCCTAGA 58.116 57.895 0.00 0.00 0.00 2.43
213 214 1.404843 GAACCAGTCGAGCCCTAGAT 58.595 55.000 0.00 0.00 0.00 1.98
214 215 1.338655 GAACCAGTCGAGCCCTAGATC 59.661 57.143 0.00 0.00 0.00 2.75
215 216 0.259065 ACCAGTCGAGCCCTAGATCA 59.741 55.000 0.00 0.00 0.00 2.92
216 217 1.133325 ACCAGTCGAGCCCTAGATCAT 60.133 52.381 0.00 0.00 0.00 2.45
217 218 1.543802 CCAGTCGAGCCCTAGATCATC 59.456 57.143 0.00 0.00 0.00 2.92
218 219 2.234143 CAGTCGAGCCCTAGATCATCA 58.766 52.381 0.00 0.00 0.00 3.07
219 220 2.824936 CAGTCGAGCCCTAGATCATCAT 59.175 50.000 0.00 0.00 0.00 2.45
220 221 3.088532 AGTCGAGCCCTAGATCATCATC 58.911 50.000 0.00 0.00 0.00 2.92
221 222 2.822561 GTCGAGCCCTAGATCATCATCA 59.177 50.000 0.00 0.00 0.00 3.07
222 223 3.446873 GTCGAGCCCTAGATCATCATCAT 59.553 47.826 0.00 0.00 0.00 2.45
223 224 3.446516 TCGAGCCCTAGATCATCATCATG 59.553 47.826 0.00 0.00 0.00 3.07
224 225 3.533547 GAGCCCTAGATCATCATCATGC 58.466 50.000 0.00 0.00 0.00 4.06
225 226 3.182976 AGCCCTAGATCATCATCATGCT 58.817 45.455 0.00 0.00 0.00 3.79
226 227 3.198200 AGCCCTAGATCATCATCATGCTC 59.802 47.826 0.00 0.00 0.00 4.26
227 228 3.055312 GCCCTAGATCATCATCATGCTCA 60.055 47.826 0.00 0.00 28.88 4.26
228 229 4.565028 GCCCTAGATCATCATCATGCTCAA 60.565 45.833 0.00 0.00 28.88 3.02
229 230 4.936411 CCCTAGATCATCATCATGCTCAAC 59.064 45.833 0.00 0.00 28.88 3.18
230 231 5.280062 CCCTAGATCATCATCATGCTCAACT 60.280 44.000 0.00 0.00 28.88 3.16
231 232 6.070938 CCCTAGATCATCATCATGCTCAACTA 60.071 42.308 0.00 0.00 28.88 2.24
232 233 6.812656 CCTAGATCATCATCATGCTCAACTAC 59.187 42.308 0.00 0.00 28.88 2.73
233 234 6.422344 AGATCATCATCATGCTCAACTACT 57.578 37.500 0.00 0.00 28.88 2.57
234 235 6.457355 AGATCATCATCATGCTCAACTACTC 58.543 40.000 0.00 0.00 28.88 2.59
235 236 4.614946 TCATCATCATGCTCAACTACTCG 58.385 43.478 0.00 0.00 0.00 4.18
236 237 4.339247 TCATCATCATGCTCAACTACTCGA 59.661 41.667 0.00 0.00 0.00 4.04
237 238 4.033990 TCATCATGCTCAACTACTCGAC 57.966 45.455 0.00 0.00 0.00 4.20
238 239 3.696548 TCATCATGCTCAACTACTCGACT 59.303 43.478 0.00 0.00 0.00 4.18
239 240 4.881850 TCATCATGCTCAACTACTCGACTA 59.118 41.667 0.00 0.00 0.00 2.59
240 241 5.532779 TCATCATGCTCAACTACTCGACTAT 59.467 40.000 0.00 0.00 0.00 2.12
249 250 3.567397 ACTACTCGACTATTCATGGCCT 58.433 45.455 3.32 0.00 0.00 5.19
264 265 4.441695 CCTCGCTCCGCTCAAGCA 62.442 66.667 2.50 0.00 42.21 3.91
270 271 0.179073 GCTCCGCTCAAGCATTCCTA 60.179 55.000 2.50 0.00 42.21 2.94
273 274 2.362397 CTCCGCTCAAGCATTCCTAGTA 59.638 50.000 2.50 0.00 42.21 1.82
275 276 3.196901 TCCGCTCAAGCATTCCTAGTAAA 59.803 43.478 2.50 0.00 42.21 2.01
276 277 4.130118 CCGCTCAAGCATTCCTAGTAAAT 58.870 43.478 2.50 0.00 42.21 1.40
277 278 4.212214 CCGCTCAAGCATTCCTAGTAAATC 59.788 45.833 2.50 0.00 42.21 2.17
286 287 5.710984 CATTCCTAGTAAATCGTCGCCTAT 58.289 41.667 0.00 0.00 0.00 2.57
295 296 2.478890 CGTCGCCTATCCGTGACCT 61.479 63.158 0.00 0.00 39.59 3.85
318 321 1.451927 CCGCATCTTTGGCCTGCTA 60.452 57.895 11.67 0.00 33.75 3.49
365 368 1.003442 CCTCTCATCCCCTCACCCA 59.997 63.158 0.00 0.00 0.00 4.51
384 387 3.057174 CCCACTATCTTGGCTATCGTCTC 60.057 52.174 0.00 0.00 35.00 3.36
392 395 2.331805 CTATCGTCTCCCGCCACG 59.668 66.667 0.00 0.00 37.36 4.94
482 485 8.198109 CCGGATGATCTTTTTCGGTCTATATAT 58.802 37.037 0.00 0.00 33.63 0.86
483 486 9.025020 CGGATGATCTTTTTCGGTCTATATATG 57.975 37.037 0.00 0.00 0.00 1.78
484 487 8.821894 GGATGATCTTTTTCGGTCTATATATGC 58.178 37.037 0.00 0.00 0.00 3.14
487 490 7.755373 TGATCTTTTTCGGTCTATATATGCTCG 59.245 37.037 0.00 0.00 0.00 5.03
494 497 4.261238 CGGTCTATATATGCTCGGTCATCC 60.261 50.000 0.00 0.00 0.00 3.51
497 500 6.212235 GTCTATATATGCTCGGTCATCCATG 58.788 44.000 0.00 0.00 0.00 3.66
547 550 5.450592 TTTTGTAAACCCGAAATACCCAC 57.549 39.130 0.00 0.00 0.00 4.61
562 565 1.700739 ACCCACAGACCGAATTAACCA 59.299 47.619 0.00 0.00 0.00 3.67
568 571 3.251487 ACAGACCGAATTAACCAAAACGG 59.749 43.478 0.00 0.00 42.68 4.44
573 576 5.658468 ACCGAATTAACCAAAACGGAAAAA 58.342 33.333 0.00 0.00 40.89 1.94
602 605 2.409870 CGAATGCCCAGGCTGTTCC 61.410 63.158 14.43 1.56 42.51 3.62
696 701 0.527817 GAACAGGTCATACGGGCGAG 60.528 60.000 0.00 0.00 0.00 5.03
757 762 2.612672 GCCATAAAACCGGAGAGCTTAC 59.387 50.000 9.46 0.00 0.00 2.34
890 906 2.805546 CTAGCGCCGGTAAGCTCA 59.194 61.111 21.05 9.77 43.44 4.26
899 915 1.211818 CGGTAAGCTCAGCTGATCGC 61.212 60.000 18.63 18.15 36.80 4.58
922 938 3.462021 CCCTCTTCTTCCGTTCATCATC 58.538 50.000 0.00 0.00 0.00 2.92
927 943 1.202417 TCTTCCGTTCATCATCTCGCC 60.202 52.381 0.00 0.00 0.00 5.54
929 945 1.951130 CCGTTCATCATCTCGCCGG 60.951 63.158 0.00 0.00 0.00 6.13
930 946 2.589492 CGTTCATCATCTCGCCGGC 61.589 63.158 19.07 19.07 0.00 6.13
957 973 3.366476 GGATATTCTGATCTCGGTGGTCG 60.366 52.174 0.00 0.00 40.90 4.79
974 990 1.389106 GTCGATCCCAACGTTCTTTCG 59.611 52.381 0.00 5.50 0.00 3.46
976 992 1.804601 GATCCCAACGTTCTTTCGGT 58.195 50.000 0.00 0.00 34.94 4.69
1112 1128 2.203126 CATGCGGAGGAGGGCTTC 60.203 66.667 0.00 0.00 0.00 3.86
1113 1129 2.366167 ATGCGGAGGAGGGCTTCT 60.366 61.111 0.00 0.00 0.00 2.85
1114 1130 1.997874 ATGCGGAGGAGGGCTTCTT 60.998 57.895 0.00 0.00 0.00 2.52
1115 1131 2.124942 GCGGAGGAGGGCTTCTTG 60.125 66.667 0.00 0.00 0.00 3.02
1116 1132 2.124942 CGGAGGAGGGCTTCTTGC 60.125 66.667 0.00 0.00 41.94 4.01
1117 1133 2.124942 GGAGGAGGGCTTCTTGCG 60.125 66.667 0.00 0.00 44.05 4.85
1118 1134 2.124942 GAGGAGGGCTTCTTGCGG 60.125 66.667 0.00 0.00 44.05 5.69
1119 1135 2.930562 AGGAGGGCTTCTTGCGGT 60.931 61.111 0.00 0.00 44.05 5.68
1173 1189 4.388499 TCGCCCAGGTTCTTCGGC 62.388 66.667 0.00 0.00 38.07 5.54
1225 1241 3.052082 CCTGGCCTGTTCGCTGTG 61.052 66.667 3.32 0.00 0.00 3.66
1239 1255 4.111016 TGTGGCTACGGCTCGTCG 62.111 66.667 3.45 0.00 41.54 5.12
1242 1258 4.549516 GGCTACGGCTCGTCGTCC 62.550 72.222 0.00 0.00 42.82 4.79
1322 1338 1.220749 GCGTCATGGAGGCTGGTAA 59.779 57.895 0.00 0.00 39.86 2.85
1355 1387 8.486210 TGTGCTATTACAAGGATTCTGAGTAAT 58.514 33.333 13.68 13.68 38.01 1.89
1373 1405 7.455058 TGAGTAATTTTGGCTTCTGGTTAGTA 58.545 34.615 0.00 0.00 0.00 1.82
1374 1406 7.606456 TGAGTAATTTTGGCTTCTGGTTAGTAG 59.394 37.037 0.00 0.00 0.00 2.57
1375 1407 7.459234 AGTAATTTTGGCTTCTGGTTAGTAGT 58.541 34.615 0.00 0.00 0.00 2.73
1376 1408 7.942894 AGTAATTTTGGCTTCTGGTTAGTAGTT 59.057 33.333 0.00 0.00 0.00 2.24
1377 1409 6.819397 ATTTTGGCTTCTGGTTAGTAGTTC 57.181 37.500 0.00 0.00 0.00 3.01
1382 1414 3.995048 GCTTCTGGTTAGTAGTTCGCTTT 59.005 43.478 0.00 0.00 0.00 3.51
1400 1432 0.893270 TTGGCGGGTTCAGTGATTGG 60.893 55.000 0.00 0.00 0.00 3.16
1405 1437 2.773487 CGGGTTCAGTGATTGGTTGTA 58.227 47.619 0.00 0.00 0.00 2.41
1406 1438 2.482721 CGGGTTCAGTGATTGGTTGTAC 59.517 50.000 0.00 0.00 0.00 2.90
1407 1439 3.751518 GGGTTCAGTGATTGGTTGTACT 58.248 45.455 0.00 0.00 0.00 2.73
1418 1450 7.117812 AGTGATTGGTTGTACTATCTGTTTTCG 59.882 37.037 0.00 0.00 0.00 3.46
1423 1455 5.163982 GGTTGTACTATCTGTTTTCGCAGTC 60.164 44.000 0.00 0.00 37.70 3.51
1441 1473 2.220224 CGAGCTCAGATGCGTGTCG 61.220 63.158 15.40 0.00 38.13 4.35
1474 1506 0.804544 TAAGAATGCGCGACGGAAGG 60.805 55.000 12.10 0.00 0.00 3.46
1513 1545 2.180204 CAATCCCCGCGTGCTAAGG 61.180 63.158 4.92 0.00 0.00 2.69
1525 1557 2.886782 GCTAAGGCTGCGCGATTCC 61.887 63.158 12.10 6.57 35.22 3.01
1640 1673 6.343716 TGGACACATTTTGCAATTCTACAT 57.656 33.333 0.00 0.00 0.00 2.29
1685 1722 4.883083 AGTATTACTGATATGTGCCCACG 58.117 43.478 0.00 0.00 0.00 4.94
1745 1782 2.461110 CGCCCTTCGGAACATTCGG 61.461 63.158 0.00 0.00 33.78 4.30
1758 1795 5.121768 CGGAACATTCGGATTGTAAGACTTT 59.878 40.000 6.01 0.00 0.00 2.66
1892 1930 0.804989 CTTTCTAGCCAAGGCCAACG 59.195 55.000 5.01 0.00 43.17 4.10
1944 1982 5.407407 AATGATGGGATATACGGTGAGTC 57.593 43.478 0.00 0.00 0.00 3.36
2325 2568 9.995003 AACTGCTCATAATATTTTGGTTTTCAA 57.005 25.926 6.12 0.00 0.00 2.69
2340 2583 7.859325 TGGTTTTCAACTATAGGTATTGCTC 57.141 36.000 4.43 0.00 0.00 4.26
2376 2619 2.708861 TGTCTTAACCTCTTTGGCCTGA 59.291 45.455 3.32 0.00 40.22 3.86
2387 2630 3.011144 TCTTTGGCCTGATGGGATTTGTA 59.989 43.478 3.32 0.00 37.23 2.41
2450 2698 2.877335 ACAGAGTTACCGATTTCTCGC 58.123 47.619 0.00 0.00 43.66 5.03
2464 2712 1.243902 TCTCGCCCAATCACCAAAAC 58.756 50.000 0.00 0.00 0.00 2.43
2465 2713 1.202879 TCTCGCCCAATCACCAAAACT 60.203 47.619 0.00 0.00 0.00 2.66
2504 2754 5.529430 TCGAAGATCTTGTTTTGCAACCTTA 59.471 36.000 14.00 0.00 32.90 2.69
2505 2755 6.038825 TCGAAGATCTTGTTTTGCAACCTTAA 59.961 34.615 14.00 0.00 32.90 1.85
2568 2818 1.673168 AGAGAAAGCCATTCGCCATC 58.327 50.000 0.89 0.00 43.15 3.51
2585 2835 0.981183 ATCCGTGTAAGTCAAGGGCA 59.019 50.000 0.00 0.00 44.00 5.36
2621 2871 1.064952 GCCAGTTTACTTGTTGCGTGT 59.935 47.619 0.00 0.00 0.00 4.49
2624 2874 2.529894 CAGTTTACTTGTTGCGTGTTGC 59.470 45.455 0.00 0.00 46.70 4.17
2634 2884 2.128128 CGTGTTGCTGTTCGCGTC 60.128 61.111 5.77 1.06 43.27 5.19
2647 2897 1.949631 CGCGTCGGCTCCCTTTATC 60.950 63.158 0.00 0.00 36.88 1.75
2665 2915 6.317391 CCTTTATCTTTCTCCTCCATGTTGTC 59.683 42.308 0.00 0.00 0.00 3.18
2711 2961 7.175797 TCCTCAAAGTCTCTGACTATGTCTTA 58.824 38.462 0.34 0.00 42.59 2.10
2737 2988 5.984233 TTGTTGGCGTAACTGATATCATC 57.016 39.130 5.72 0.00 40.05 2.92
2772 3023 9.687210 AATAAATTACCCTTTGTCGAAAGAAAC 57.313 29.630 0.00 0.00 45.01 2.78
2773 3024 6.702716 AATTACCCTTTGTCGAAAGAAACA 57.297 33.333 0.00 0.00 45.01 2.83
2774 3025 5.744666 TTACCCTTTGTCGAAAGAAACAG 57.255 39.130 0.00 0.00 45.01 3.16
2782 3033 5.924475 TGTCGAAAGAAACAGAATTCCTC 57.076 39.130 0.65 0.00 45.01 3.71
2793 3044 6.541111 AACAGAATTCCTCAAGTACGAAAC 57.459 37.500 0.65 0.00 0.00 2.78
2885 3136 6.047231 GGTTCCTATACAAGTCAATAAGCGT 58.953 40.000 0.00 0.00 0.00 5.07
2888 3139 8.913656 GTTCCTATACAAGTCAATAAGCGTATC 58.086 37.037 0.00 0.00 0.00 2.24
2930 3181 2.429250 AGTTGTACAACCAAAGCCAACC 59.571 45.455 30.36 5.81 42.06 3.77
2999 3250 9.129209 GACAAGTAAGATGGCAAAAATAACTTC 57.871 33.333 0.00 0.00 0.00 3.01
3018 3269 4.785376 ACTTCCATAGGTTCCTGTCAGAAT 59.215 41.667 0.00 0.00 0.00 2.40
3041 3314 2.936202 AGTGTTTCTCCAAGCACACAT 58.064 42.857 4.26 0.00 44.12 3.21
3042 3315 3.290710 AGTGTTTCTCCAAGCACACATT 58.709 40.909 4.26 0.00 44.12 2.71
3088 3363 1.228245 TGGTGACCAGCCTTGCTTC 60.228 57.895 0.00 0.00 36.40 3.86
3103 3378 0.606673 GCTTCGAAGCCCAGGAGTTT 60.607 55.000 34.88 0.00 46.20 2.66
3112 3387 1.273327 GCCCAGGAGTTTGATTTGGTG 59.727 52.381 0.00 0.00 0.00 4.17
3115 3390 1.608590 CAGGAGTTTGATTTGGTGCGT 59.391 47.619 0.00 0.00 0.00 5.24
3157 3432 3.728845 TGAGGAACGCTATAAAGATGCC 58.271 45.455 0.00 0.00 0.00 4.40
3169 3444 0.462759 AAGATGCCGGTAAGCTGCTC 60.463 55.000 1.00 0.00 0.00 4.26
3178 3453 1.399791 GGTAAGCTGCTCATGACTTGC 59.600 52.381 1.00 5.28 0.00 4.01
3182 3457 0.168348 GCTGCTCATGACTTGCACAG 59.832 55.000 4.13 1.50 33.52 3.66
3191 3466 6.810182 GCTCATGACTTGCACAGATAAAATTT 59.190 34.615 0.00 0.00 0.00 1.82
3203 3478 5.163794 ACAGATAAAATTTACGCGTTCCCTG 60.164 40.000 20.78 13.74 0.00 4.45
3211 3490 2.829206 CGCGTTCCCTGTGTTGCAA 61.829 57.895 0.00 0.00 0.00 4.08
3324 3610 4.991153 TTCAGCTCAATACAGAGATCGT 57.009 40.909 0.00 0.00 37.87 3.73
3339 3625 1.855360 GATCGTCTTCTCATGTTCCGC 59.145 52.381 0.00 0.00 0.00 5.54
3428 3727 1.093159 GAGGTGCTCTGCCAAATCAG 58.907 55.000 0.00 0.00 35.46 2.90
3443 3796 6.210784 TGCCAAATCAGTCACTACTAACTACT 59.789 38.462 0.00 0.00 33.48 2.57
3444 3797 6.531948 GCCAAATCAGTCACTACTAACTACTG 59.468 42.308 0.00 0.00 39.10 2.74
3446 3799 7.755822 CCAAATCAGTCACTACTAACTACTGTC 59.244 40.741 0.00 0.00 38.88 3.51
3447 3800 7.997773 AATCAGTCACTACTAACTACTGTCA 57.002 36.000 0.00 0.00 38.88 3.58
3449 3802 7.379098 TCAGTCACTACTAACTACTGTCATG 57.621 40.000 0.00 0.00 38.88 3.07
3450 3803 6.030849 CAGTCACTACTAACTACTGTCATGC 58.969 44.000 0.00 0.00 34.28 4.06
3451 3804 5.946972 AGTCACTACTAACTACTGTCATGCT 59.053 40.000 0.00 0.00 32.84 3.79
3452 3805 6.030849 GTCACTACTAACTACTGTCATGCTG 58.969 44.000 0.00 0.00 0.00 4.41
3453 3806 4.800993 CACTACTAACTACTGTCATGCTGC 59.199 45.833 0.00 0.00 0.00 5.25
3454 3807 3.961480 ACTAACTACTGTCATGCTGCA 57.039 42.857 4.13 4.13 0.00 4.41
3455 3808 4.271696 ACTAACTACTGTCATGCTGCAA 57.728 40.909 6.36 0.00 0.00 4.08
3456 3809 4.836825 ACTAACTACTGTCATGCTGCAAT 58.163 39.130 6.36 0.00 0.00 3.56
3457 3810 5.248640 ACTAACTACTGTCATGCTGCAATT 58.751 37.500 6.36 0.00 0.00 2.32
3458 3811 5.707298 ACTAACTACTGTCATGCTGCAATTT 59.293 36.000 6.36 0.00 0.00 1.82
3459 3812 4.430137 ACTACTGTCATGCTGCAATTTG 57.570 40.909 6.36 0.01 0.00 2.32
3460 3813 3.822735 ACTACTGTCATGCTGCAATTTGT 59.177 39.130 6.36 5.25 0.00 2.83
3461 3814 3.293311 ACTGTCATGCTGCAATTTGTC 57.707 42.857 6.36 0.00 0.00 3.18
3462 3815 2.624364 ACTGTCATGCTGCAATTTGTCA 59.376 40.909 6.36 4.00 0.00 3.58
3463 3816 3.257375 ACTGTCATGCTGCAATTTGTCAT 59.743 39.130 6.36 0.00 0.00 3.06
3464 3817 4.242475 CTGTCATGCTGCAATTTGTCATT 58.758 39.130 6.36 0.00 0.00 2.57
3465 3818 3.991121 TGTCATGCTGCAATTTGTCATTG 59.009 39.130 6.36 0.00 0.00 2.82
3466 3819 3.991773 GTCATGCTGCAATTTGTCATTGT 59.008 39.130 6.36 0.00 0.00 2.71
3467 3820 4.449743 GTCATGCTGCAATTTGTCATTGTT 59.550 37.500 6.36 0.00 0.00 2.83
3468 3821 5.049954 GTCATGCTGCAATTTGTCATTGTTT 60.050 36.000 6.36 0.00 0.00 2.83
3469 3822 5.177881 TCATGCTGCAATTTGTCATTGTTTC 59.822 36.000 6.36 0.00 0.00 2.78
3470 3823 4.439968 TGCTGCAATTTGTCATTGTTTCA 58.560 34.783 0.00 0.00 0.00 2.69
3471 3824 4.270566 TGCTGCAATTTGTCATTGTTTCAC 59.729 37.500 0.00 0.00 0.00 3.18
3472 3825 4.508861 GCTGCAATTTGTCATTGTTTCACT 59.491 37.500 0.00 0.00 0.00 3.41
3473 3826 5.557514 GCTGCAATTTGTCATTGTTTCACTG 60.558 40.000 0.00 0.00 0.00 3.66
3474 3827 5.417811 TGCAATTTGTCATTGTTTCACTGT 58.582 33.333 0.00 0.00 0.00 3.55
3475 3828 5.519566 TGCAATTTGTCATTGTTTCACTGTC 59.480 36.000 0.00 0.00 0.00 3.51
3476 3829 5.750067 GCAATTTGTCATTGTTTCACTGTCT 59.250 36.000 0.00 0.00 0.00 3.41
3477 3830 6.291955 GCAATTTGTCATTGTTTCACTGTCTG 60.292 38.462 0.00 0.00 0.00 3.51
3478 3831 5.895636 TTTGTCATTGTTTCACTGTCTGT 57.104 34.783 0.00 0.00 0.00 3.41
3479 3832 5.895636 TTGTCATTGTTTCACTGTCTGTT 57.104 34.783 0.00 0.00 0.00 3.16
3480 3833 5.484173 TGTCATTGTTTCACTGTCTGTTC 57.516 39.130 0.00 0.00 0.00 3.18
3481 3834 5.185454 TGTCATTGTTTCACTGTCTGTTCT 58.815 37.500 0.00 0.00 0.00 3.01
3482 3835 6.345298 TGTCATTGTTTCACTGTCTGTTCTA 58.655 36.000 0.00 0.00 0.00 2.10
3483 3836 6.257849 TGTCATTGTTTCACTGTCTGTTCTAC 59.742 38.462 0.00 0.00 0.00 2.59
3484 3837 5.758296 TCATTGTTTCACTGTCTGTTCTACC 59.242 40.000 0.00 0.00 0.00 3.18
3485 3838 3.713288 TGTTTCACTGTCTGTTCTACCG 58.287 45.455 0.00 0.00 0.00 4.02
3486 3839 3.057734 GTTTCACTGTCTGTTCTACCGG 58.942 50.000 0.00 0.00 0.00 5.28
3487 3840 1.991121 TCACTGTCTGTTCTACCGGT 58.009 50.000 13.98 13.98 0.00 5.28
3488 3841 3.144657 TCACTGTCTGTTCTACCGGTA 57.855 47.619 14.95 14.95 0.00 4.02
3489 3842 2.816087 TCACTGTCTGTTCTACCGGTAC 59.184 50.000 11.16 4.33 0.00 3.34
3490 3843 2.818432 CACTGTCTGTTCTACCGGTACT 59.182 50.000 11.16 0.00 0.00 2.73
3491 3844 2.818432 ACTGTCTGTTCTACCGGTACTG 59.182 50.000 11.16 8.38 0.00 2.74
3492 3845 3.079578 CTGTCTGTTCTACCGGTACTGA 58.920 50.000 11.16 10.77 0.00 3.41
3493 3846 2.816087 TGTCTGTTCTACCGGTACTGAC 59.184 50.000 26.72 26.72 39.63 3.51
3494 3847 2.816087 GTCTGTTCTACCGGTACTGACA 59.184 50.000 27.71 21.79 39.26 3.58
3495 3848 3.254166 GTCTGTTCTACCGGTACTGACAA 59.746 47.826 27.71 14.39 39.26 3.18
3496 3849 4.082354 GTCTGTTCTACCGGTACTGACAAT 60.082 45.833 27.71 1.59 39.26 2.71
3497 3850 4.525487 TCTGTTCTACCGGTACTGACAATT 59.475 41.667 11.16 0.00 0.00 2.32
3498 3851 5.011329 TCTGTTCTACCGGTACTGACAATTT 59.989 40.000 11.16 0.00 0.00 1.82
3499 3852 5.613329 TGTTCTACCGGTACTGACAATTTT 58.387 37.500 11.16 0.00 0.00 1.82
3500 3853 5.697633 TGTTCTACCGGTACTGACAATTTTC 59.302 40.000 11.16 0.00 0.00 2.29
3501 3854 5.471556 TCTACCGGTACTGACAATTTTCA 57.528 39.130 11.16 0.00 0.00 2.69
3502 3855 6.045072 TCTACCGGTACTGACAATTTTCAT 57.955 37.500 11.16 0.00 0.00 2.57
3523 3876 4.970662 TTTTGTCATAATCAGAGCCTGC 57.029 40.909 0.00 0.00 0.00 4.85
3527 3880 2.121948 TCATAATCAGAGCCTGCTGGT 58.878 47.619 11.69 0.00 36.55 4.00
3586 3939 3.753272 TCTAGCAAACATCAAGAAGCACC 59.247 43.478 0.00 0.00 0.00 5.01
3686 4039 9.577110 CTGCACAATTGATTATAGTCAAACATT 57.423 29.630 13.59 2.77 41.09 2.71
3743 4097 5.278808 GGTTCTGTTTCACCTTTATTCCCAC 60.279 44.000 0.00 0.00 0.00 4.61
3760 4114 2.073716 ACCACCCCTTCGTCCAACA 61.074 57.895 0.00 0.00 0.00 3.33
3761 4115 1.599797 CCACCCCTTCGTCCAACAC 60.600 63.158 0.00 0.00 0.00 3.32
3763 4117 0.682852 CACCCCTTCGTCCAACACTA 59.317 55.000 0.00 0.00 0.00 2.74
3764 4118 1.278127 CACCCCTTCGTCCAACACTAT 59.722 52.381 0.00 0.00 0.00 2.12
3807 4294 7.599998 TCACCTTAATTAACGTACCTTCTGAAC 59.400 37.037 0.00 0.00 0.00 3.18
3808 4295 7.601508 CACCTTAATTAACGTACCTTCTGAACT 59.398 37.037 0.00 0.00 0.00 3.01
3891 4689 2.916702 AACGTAAGGTTCCCGTTTCT 57.083 45.000 0.00 0.00 41.58 2.52
3897 4695 4.561326 CGTAAGGTTCCCGTTTCTCCTTTA 60.561 45.833 0.00 0.00 39.00 1.85
3900 4698 4.586884 AGGTTCCCGTTTCTCCTTTATTC 58.413 43.478 0.00 0.00 0.00 1.75
3901 4699 3.693085 GGTTCCCGTTTCTCCTTTATTCC 59.307 47.826 0.00 0.00 0.00 3.01
3904 4702 3.014623 CCCGTTTCTCCTTTATTCCCAC 58.985 50.000 0.00 0.00 0.00 4.61
3910 4708 1.004436 TCCTTTATTCCCACCACCCC 58.996 55.000 0.00 0.00 0.00 4.95
3925 4723 0.767060 ACCCCTTCGTCCAACCTTCT 60.767 55.000 0.00 0.00 0.00 2.85
3927 4725 0.036294 CCCTTCGTCCAACCTTCTCC 60.036 60.000 0.00 0.00 0.00 3.71
3928 4726 0.389948 CCTTCGTCCAACCTTCTCCG 60.390 60.000 0.00 0.00 0.00 4.63
3930 4728 0.032952 TTCGTCCAACCTTCTCCGTG 59.967 55.000 0.00 0.00 0.00 4.94
3940 4738 5.878116 CCAACCTTCTCCGTGTAATAATCAA 59.122 40.000 0.00 0.00 0.00 2.57
3941 4739 6.542370 CCAACCTTCTCCGTGTAATAATCAAT 59.458 38.462 0.00 0.00 0.00 2.57
3942 4740 7.254795 CCAACCTTCTCCGTGTAATAATCAATC 60.255 40.741 0.00 0.00 0.00 2.67
3943 4741 6.884832 ACCTTCTCCGTGTAATAATCAATCA 58.115 36.000 0.00 0.00 0.00 2.57
3944 4742 6.761714 ACCTTCTCCGTGTAATAATCAATCAC 59.238 38.462 0.00 0.00 0.00 3.06
3945 4743 6.202954 CCTTCTCCGTGTAATAATCAATCACC 59.797 42.308 0.00 0.00 0.00 4.02
3946 4744 6.479972 TCTCCGTGTAATAATCAATCACCT 57.520 37.500 0.00 0.00 0.00 4.00
3947 4745 6.884832 TCTCCGTGTAATAATCAATCACCTT 58.115 36.000 0.00 0.00 0.00 3.50
3948 4746 8.014070 TCTCCGTGTAATAATCAATCACCTTA 57.986 34.615 0.00 0.00 0.00 2.69
3949 4747 8.141909 TCTCCGTGTAATAATCAATCACCTTAG 58.858 37.037 0.00 0.00 0.00 2.18
3967 4765 8.092687 TCACCTTAGTTTACATACCTTCTGAAC 58.907 37.037 0.00 0.00 0.00 3.18
3968 4766 8.095169 CACCTTAGTTTACATACCTTCTGAACT 58.905 37.037 0.00 0.00 0.00 3.01
4026 4836 5.943349 AAATCATGGGCAGAATTTGATGA 57.057 34.783 0.00 0.00 0.00 2.92
4035 4845 7.042950 TGGGCAGAATTTGATGAACATTTATG 58.957 34.615 0.00 0.00 0.00 1.90
4038 4848 9.754382 GGCAGAATTTGATGAACATTTATGTAT 57.246 29.630 0.00 0.00 40.80 2.29
4051 4861 9.755064 GAACATTTATGTATACAATCGCATACC 57.245 33.333 10.14 0.00 40.80 2.73
4052 4862 8.840833 ACATTTATGTATACAATCGCATACCA 57.159 30.769 10.14 0.00 39.68 3.25
4054 4864 9.706846 CATTTATGTATACAATCGCATACCATG 57.293 33.333 10.14 0.00 0.00 3.66
4055 4865 7.841915 TTATGTATACAATCGCATACCATGG 57.158 36.000 11.19 11.19 0.00 3.66
4060 4870 0.473755 AATCGCATACCATGGGCAGA 59.526 50.000 18.09 11.66 42.34 4.26
4069 4879 3.959495 ACCATGGGCAGATAAATCACT 57.041 42.857 18.09 0.00 0.00 3.41
4144 4954 7.888250 TTACACAATCACATATTATGGGCAA 57.112 32.000 8.48 0.00 32.41 4.52
4155 4965 8.849168 CACATATTATGGGCAAGTAAATCAGAA 58.151 33.333 8.48 0.00 33.60 3.02
4162 4972 4.700213 GGGCAAGTAAATCAGAAGCTAACA 59.300 41.667 0.00 0.00 0.00 2.41
4167 4977 9.314321 GCAAGTAAATCAGAAGCTAACATACTA 57.686 33.333 0.00 0.00 0.00 1.82
4190 5000 9.216117 ACTAGAATATTTATATCCCGTTGCAAC 57.784 33.333 19.89 19.89 0.00 4.17
4212 5022 2.095372 GCACGGGCATTGTTCTAGTTAC 59.905 50.000 3.77 0.00 40.72 2.50
4214 5024 4.000988 CACGGGCATTGTTCTAGTTACTT 58.999 43.478 0.00 0.00 0.00 2.24
4216 5026 5.291128 CACGGGCATTGTTCTAGTTACTTAG 59.709 44.000 0.00 0.00 0.00 2.18
4217 5027 5.186409 ACGGGCATTGTTCTAGTTACTTAGA 59.814 40.000 0.00 0.00 0.00 2.10
4218 5028 6.127140 ACGGGCATTGTTCTAGTTACTTAGAT 60.127 38.462 0.00 0.00 30.20 1.98
4219 5029 7.069085 ACGGGCATTGTTCTAGTTACTTAGATA 59.931 37.037 0.00 0.00 30.20 1.98
4220 5030 8.088981 CGGGCATTGTTCTAGTTACTTAGATAT 58.911 37.037 0.00 0.00 30.20 1.63
4221 5031 9.425577 GGGCATTGTTCTAGTTACTTAGATATC 57.574 37.037 0.00 0.00 30.20 1.63
4244 5054 8.753497 ATCTTTTAGGGAATCAAATGACTACC 57.247 34.615 0.00 0.00 0.00 3.18
4245 5055 7.928873 TCTTTTAGGGAATCAAATGACTACCT 58.071 34.615 0.71 0.71 0.00 3.08
4246 5056 8.390921 TCTTTTAGGGAATCAAATGACTACCTT 58.609 33.333 0.21 0.00 0.00 3.50
4247 5057 9.681062 CTTTTAGGGAATCAAATGACTACCTTA 57.319 33.333 0.21 0.00 0.00 2.69
4248 5058 9.681062 TTTTAGGGAATCAAATGACTACCTTAG 57.319 33.333 0.21 0.00 0.00 2.18
4249 5059 5.685728 AGGGAATCAAATGACTACCTTAGC 58.314 41.667 0.00 0.00 0.00 3.09
4250 5060 5.430089 AGGGAATCAAATGACTACCTTAGCT 59.570 40.000 0.00 0.00 0.00 3.32
4251 5061 5.760743 GGGAATCAAATGACTACCTTAGCTC 59.239 44.000 0.00 0.00 0.00 4.09
4252 5062 5.760743 GGAATCAAATGACTACCTTAGCTCC 59.239 44.000 0.00 0.00 0.00 4.70
4253 5063 4.386867 TCAAATGACTACCTTAGCTCCG 57.613 45.455 0.00 0.00 0.00 4.63
4254 5064 4.021229 TCAAATGACTACCTTAGCTCCGA 58.979 43.478 0.00 0.00 0.00 4.55
4255 5065 4.649674 TCAAATGACTACCTTAGCTCCGAT 59.350 41.667 0.00 0.00 0.00 4.18
4256 5066 4.592485 AATGACTACCTTAGCTCCGATG 57.408 45.455 0.00 0.00 0.00 3.84
4257 5067 3.014304 TGACTACCTTAGCTCCGATGT 57.986 47.619 0.00 0.00 0.00 3.06
4258 5068 4.160642 TGACTACCTTAGCTCCGATGTA 57.839 45.455 0.00 0.00 0.00 2.29
4259 5069 4.529897 TGACTACCTTAGCTCCGATGTAA 58.470 43.478 0.00 0.00 0.00 2.41
4260 5070 4.951715 TGACTACCTTAGCTCCGATGTAAA 59.048 41.667 0.00 0.00 0.00 2.01
4261 5071 5.067413 TGACTACCTTAGCTCCGATGTAAAG 59.933 44.000 0.00 0.00 0.00 1.85
4262 5072 5.198965 ACTACCTTAGCTCCGATGTAAAGA 58.801 41.667 0.00 0.00 0.00 2.52
4263 5073 5.834204 ACTACCTTAGCTCCGATGTAAAGAT 59.166 40.000 0.00 0.00 0.00 2.40
4264 5074 7.002879 ACTACCTTAGCTCCGATGTAAAGATA 58.997 38.462 0.00 0.00 0.00 1.98
4265 5075 6.919775 ACCTTAGCTCCGATGTAAAGATAT 57.080 37.500 0.00 0.00 0.00 1.63
4266 5076 7.304497 ACCTTAGCTCCGATGTAAAGATATT 57.696 36.000 0.00 0.00 0.00 1.28
4267 5077 7.379750 ACCTTAGCTCCGATGTAAAGATATTC 58.620 38.462 0.00 0.00 0.00 1.75
4268 5078 6.814146 CCTTAGCTCCGATGTAAAGATATTCC 59.186 42.308 0.00 0.00 0.00 3.01
4269 5079 5.808366 AGCTCCGATGTAAAGATATTCCA 57.192 39.130 0.00 0.00 0.00 3.53
4270 5080 5.788450 AGCTCCGATGTAAAGATATTCCAG 58.212 41.667 0.00 0.00 0.00 3.86
4271 5081 5.540337 AGCTCCGATGTAAAGATATTCCAGA 59.460 40.000 0.00 0.00 0.00 3.86
4272 5082 5.635700 GCTCCGATGTAAAGATATTCCAGAC 59.364 44.000 0.00 0.00 0.00 3.51
4273 5083 5.769367 TCCGATGTAAAGATATTCCAGACG 58.231 41.667 0.00 0.00 0.00 4.18
4274 5084 4.386049 CCGATGTAAAGATATTCCAGACGC 59.614 45.833 0.00 0.00 0.00 5.19
4275 5085 4.982295 CGATGTAAAGATATTCCAGACGCA 59.018 41.667 0.00 0.00 0.00 5.24
4276 5086 5.462068 CGATGTAAAGATATTCCAGACGCAA 59.538 40.000 0.00 0.00 0.00 4.85
4277 5087 6.146184 CGATGTAAAGATATTCCAGACGCAAT 59.854 38.462 0.00 0.00 0.00 3.56
4278 5088 7.328493 CGATGTAAAGATATTCCAGACGCAATA 59.672 37.037 0.00 0.00 0.00 1.90
4279 5089 7.709269 TGTAAAGATATTCCAGACGCAATAC 57.291 36.000 0.00 0.00 0.00 1.89
4280 5090 7.497595 TGTAAAGATATTCCAGACGCAATACT 58.502 34.615 0.00 0.00 0.00 2.12
4281 5091 6.851222 AAAGATATTCCAGACGCAATACTG 57.149 37.500 0.00 0.00 0.00 2.74
4282 5092 5.791336 AGATATTCCAGACGCAATACTGA 57.209 39.130 0.00 0.00 36.38 3.41
4283 5093 6.352016 AGATATTCCAGACGCAATACTGAT 57.648 37.500 0.00 0.00 36.38 2.90
4284 5094 7.468141 AGATATTCCAGACGCAATACTGATA 57.532 36.000 0.00 0.00 36.38 2.15
4285 5095 7.542890 AGATATTCCAGACGCAATACTGATAG 58.457 38.462 0.00 0.00 36.38 2.08
4286 5096 5.791336 ATTCCAGACGCAATACTGATAGA 57.209 39.130 0.00 0.00 36.38 1.98
4287 5097 4.569761 TCCAGACGCAATACTGATAGAC 57.430 45.455 0.00 0.00 36.38 2.59
4288 5098 3.951680 TCCAGACGCAATACTGATAGACA 59.048 43.478 0.00 0.00 36.38 3.41
4289 5099 4.584743 TCCAGACGCAATACTGATAGACAT 59.415 41.667 0.00 0.00 36.38 3.06
4290 5100 4.683320 CCAGACGCAATACTGATAGACATG 59.317 45.833 0.00 0.00 36.38 3.21
4291 5101 5.284864 CAGACGCAATACTGATAGACATGT 58.715 41.667 0.00 0.00 36.38 3.21
4292 5102 6.438763 CAGACGCAATACTGATAGACATGTA 58.561 40.000 0.00 0.00 36.38 2.29
4293 5103 6.360947 CAGACGCAATACTGATAGACATGTAC 59.639 42.308 0.00 0.00 36.38 2.90
4294 5104 6.263392 AGACGCAATACTGATAGACATGTACT 59.737 38.462 0.00 0.37 0.00 2.73
4295 5105 6.209361 ACGCAATACTGATAGACATGTACTG 58.791 40.000 0.00 0.00 0.00 2.74
4296 5106 5.117745 CGCAATACTGATAGACATGTACTGC 59.882 44.000 0.00 0.00 34.93 4.40
4297 5107 5.985530 GCAATACTGATAGACATGTACTGCA 59.014 40.000 0.00 1.28 36.46 4.41
4298 5108 6.648310 GCAATACTGATAGACATGTACTGCAT 59.352 38.462 0.00 0.00 36.46 3.96
4299 5109 7.172190 GCAATACTGATAGACATGTACTGCATT 59.828 37.037 0.00 0.00 36.46 3.56
4300 5110 9.049523 CAATACTGATAGACATGTACTGCATTT 57.950 33.333 0.00 0.00 35.19 2.32
4301 5111 8.824159 ATACTGATAGACATGTACTGCATTTC 57.176 34.615 0.00 0.00 35.19 2.17
4302 5112 6.643388 ACTGATAGACATGTACTGCATTTCA 58.357 36.000 0.00 0.00 36.89 2.69
4303 5113 7.105588 ACTGATAGACATGTACTGCATTTCAA 58.894 34.615 0.00 0.00 36.89 2.69
4304 5114 7.772292 ACTGATAGACATGTACTGCATTTCAAT 59.228 33.333 0.00 0.00 36.89 2.57
4305 5115 9.264719 CTGATAGACATGTACTGCATTTCAATA 57.735 33.333 0.00 0.00 36.89 1.90
4306 5116 9.045223 TGATAGACATGTACTGCATTTCAATAC 57.955 33.333 0.00 0.00 36.89 1.89
4307 5117 9.265901 GATAGACATGTACTGCATTTCAATACT 57.734 33.333 0.00 0.00 36.89 2.12
4312 5122 8.993121 ACATGTACTGCATTTCAATACTATAGC 58.007 33.333 0.00 0.00 35.19 2.97
4313 5123 7.962964 TGTACTGCATTTCAATACTATAGCC 57.037 36.000 0.00 0.00 29.37 3.93
4314 5124 6.645003 TGTACTGCATTTCAATACTATAGCCG 59.355 38.462 0.00 0.00 29.37 5.52
4315 5125 4.997395 ACTGCATTTCAATACTATAGCCGG 59.003 41.667 0.00 0.00 0.00 6.13
4316 5126 4.968259 TGCATTTCAATACTATAGCCGGT 58.032 39.130 1.90 0.00 0.00 5.28
4317 5127 4.754618 TGCATTTCAATACTATAGCCGGTG 59.245 41.667 1.90 0.00 0.00 4.94
4318 5128 4.755123 GCATTTCAATACTATAGCCGGTGT 59.245 41.667 1.90 0.00 0.00 4.16
4319 5129 5.929992 GCATTTCAATACTATAGCCGGTGTA 59.070 40.000 1.90 0.00 0.00 2.90
4320 5130 6.090898 GCATTTCAATACTATAGCCGGTGTAG 59.909 42.308 1.90 5.85 0.00 2.74
4321 5131 6.720112 TTTCAATACTATAGCCGGTGTAGT 57.280 37.500 16.15 16.15 36.98 2.73
4322 5132 7.822161 TTTCAATACTATAGCCGGTGTAGTA 57.178 36.000 18.49 18.49 39.06 1.82
4323 5133 7.822161 TTCAATACTATAGCCGGTGTAGTAA 57.178 36.000 19.46 8.41 38.44 2.24
4324 5134 7.206981 TCAATACTATAGCCGGTGTAGTAAC 57.793 40.000 19.46 0.00 38.44 2.50
4325 5135 5.869753 ATACTATAGCCGGTGTAGTAACG 57.130 43.478 19.46 0.00 38.44 3.18
4333 5143 3.070429 CGGTGTAGTAACGGACATACC 57.930 52.381 0.00 0.00 0.00 2.73
4334 5144 2.423185 CGGTGTAGTAACGGACATACCA 59.577 50.000 0.00 0.00 38.90 3.25
4335 5145 3.119531 CGGTGTAGTAACGGACATACCAA 60.120 47.826 0.00 0.00 38.90 3.67
4336 5146 4.617995 CGGTGTAGTAACGGACATACCAAA 60.618 45.833 0.00 0.00 38.90 3.28
4337 5147 4.627035 GGTGTAGTAACGGACATACCAAAC 59.373 45.833 0.00 0.00 38.90 2.93
4338 5148 5.473039 GTGTAGTAACGGACATACCAAACT 58.527 41.667 0.00 0.00 38.90 2.66
4339 5149 5.928264 GTGTAGTAACGGACATACCAAACTT 59.072 40.000 0.00 0.00 38.90 2.66
4340 5150 6.089954 GTGTAGTAACGGACATACCAAACTTC 59.910 42.308 0.00 0.00 38.90 3.01
4341 5151 5.479124 AGTAACGGACATACCAAACTTCT 57.521 39.130 0.00 0.00 38.90 2.85
4342 5152 6.594788 AGTAACGGACATACCAAACTTCTA 57.405 37.500 0.00 0.00 38.90 2.10
4343 5153 6.628185 AGTAACGGACATACCAAACTTCTAG 58.372 40.000 0.00 0.00 38.90 2.43
4344 5154 5.733620 AACGGACATACCAAACTTCTAGA 57.266 39.130 0.00 0.00 38.90 2.43
4345 5155 5.326200 ACGGACATACCAAACTTCTAGAG 57.674 43.478 0.00 0.00 38.90 2.43
4346 5156 4.771054 ACGGACATACCAAACTTCTAGAGT 59.229 41.667 0.00 0.00 38.33 3.24
4347 5157 5.948162 ACGGACATACCAAACTTCTAGAGTA 59.052 40.000 0.00 0.00 36.55 2.59
4348 5158 6.435277 ACGGACATACCAAACTTCTAGAGTAA 59.565 38.462 0.00 0.00 36.55 2.24
4349 5159 6.750963 CGGACATACCAAACTTCTAGAGTAAC 59.249 42.308 0.00 0.00 36.55 2.50
4350 5160 7.040494 GGACATACCAAACTTCTAGAGTAACC 58.960 42.308 0.00 0.00 36.68 2.85
4351 5161 7.310237 GGACATACCAAACTTCTAGAGTAACCA 60.310 40.741 0.00 0.00 36.68 3.67
4352 5162 7.384477 ACATACCAAACTTCTAGAGTAACCAC 58.616 38.462 0.00 0.00 37.72 4.16
4353 5163 5.224821 ACCAAACTTCTAGAGTAACCACC 57.775 43.478 0.00 0.00 37.72 4.61
4354 5164 4.657039 ACCAAACTTCTAGAGTAACCACCA 59.343 41.667 0.00 0.00 37.72 4.17
4355 5165 5.309806 ACCAAACTTCTAGAGTAACCACCAT 59.690 40.000 0.00 0.00 37.72 3.55
4356 5166 6.499350 ACCAAACTTCTAGAGTAACCACCATA 59.501 38.462 0.00 0.00 37.72 2.74
4357 5167 7.016858 ACCAAACTTCTAGAGTAACCACCATAA 59.983 37.037 0.00 0.00 37.72 1.90
4358 5168 7.333672 CCAAACTTCTAGAGTAACCACCATAAC 59.666 40.741 0.00 0.00 37.72 1.89
4359 5169 6.541934 ACTTCTAGAGTAACCACCATAACC 57.458 41.667 0.00 0.00 36.65 2.85
4360 5170 6.021030 ACTTCTAGAGTAACCACCATAACCA 58.979 40.000 0.00 0.00 36.65 3.67
4361 5171 6.499350 ACTTCTAGAGTAACCACCATAACCAA 59.501 38.462 0.00 0.00 36.65 3.67
4362 5172 6.540438 TCTAGAGTAACCACCATAACCAAG 57.460 41.667 0.00 0.00 0.00 3.61
4363 5173 6.021030 TCTAGAGTAACCACCATAACCAAGT 58.979 40.000 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.103305 TGTCTTCTTTCTATATCTTTGTTGGCT 58.897 33.333 0.00 0.00 0.00 4.75
1 2 8.268850 TGTCTTCTTTCTATATCTTTGTTGGC 57.731 34.615 0.00 0.00 0.00 4.52
29 30 8.001881 ACTTTTGGGTTTCTTTGTTTGTTTTT 57.998 26.923 0.00 0.00 0.00 1.94
30 31 7.575414 ACTTTTGGGTTTCTTTGTTTGTTTT 57.425 28.000 0.00 0.00 0.00 2.43
31 32 8.678593 TTACTTTTGGGTTTCTTTGTTTGTTT 57.321 26.923 0.00 0.00 0.00 2.83
32 33 8.678593 TTTACTTTTGGGTTTCTTTGTTTGTT 57.321 26.923 0.00 0.00 0.00 2.83
33 34 8.678593 TTTTACTTTTGGGTTTCTTTGTTTGT 57.321 26.923 0.00 0.00 0.00 2.83
172 173 2.875317 GGCCGCCAATTTTCTTCAAAAA 59.125 40.909 3.91 0.00 35.10 1.94
173 174 2.488952 GGCCGCCAATTTTCTTCAAAA 58.511 42.857 3.91 0.00 35.92 2.44
174 175 1.604185 CGGCCGCCAATTTTCTTCAAA 60.604 47.619 14.67 0.00 0.00 2.69
175 176 0.038709 CGGCCGCCAATTTTCTTCAA 60.039 50.000 14.67 0.00 0.00 2.69
176 177 0.891449 TCGGCCGCCAATTTTCTTCA 60.891 50.000 23.51 0.00 0.00 3.02
177 178 0.242555 TTCGGCCGCCAATTTTCTTC 59.757 50.000 23.51 0.00 0.00 2.87
178 179 0.038618 GTTCGGCCGCCAATTTTCTT 60.039 50.000 23.51 0.00 0.00 2.52
179 180 1.584495 GTTCGGCCGCCAATTTTCT 59.416 52.632 23.51 0.00 0.00 2.52
180 181 1.445410 GGTTCGGCCGCCAATTTTC 60.445 57.895 23.51 3.82 0.00 2.29
181 182 2.153547 CTGGTTCGGCCGCCAATTTT 62.154 55.000 23.51 0.00 41.21 1.82
182 183 2.598985 TGGTTCGGCCGCCAATTT 60.599 55.556 23.51 0.00 41.21 1.82
183 184 3.061848 CTGGTTCGGCCGCCAATT 61.062 61.111 23.51 0.00 41.21 2.32
184 185 4.344865 ACTGGTTCGGCCGCCAAT 62.345 61.111 23.51 10.62 41.21 3.16
194 195 1.338655 GATCTAGGGCTCGACTGGTTC 59.661 57.143 0.00 0.00 0.00 3.62
195 196 1.342076 TGATCTAGGGCTCGACTGGTT 60.342 52.381 0.00 0.00 0.00 3.67
196 197 0.259065 TGATCTAGGGCTCGACTGGT 59.741 55.000 0.00 0.00 0.00 4.00
197 198 1.543802 GATGATCTAGGGCTCGACTGG 59.456 57.143 0.00 0.00 0.00 4.00
198 199 2.234143 TGATGATCTAGGGCTCGACTG 58.766 52.381 0.00 0.00 0.00 3.51
199 200 2.666272 TGATGATCTAGGGCTCGACT 57.334 50.000 0.00 0.00 0.00 4.18
200 201 2.822561 TGATGATGATCTAGGGCTCGAC 59.177 50.000 0.00 0.00 0.00 4.20
201 202 3.160679 TGATGATGATCTAGGGCTCGA 57.839 47.619 0.00 0.00 0.00 4.04
202 203 3.783191 CATGATGATGATCTAGGGCTCG 58.217 50.000 0.00 0.00 0.00 5.03
203 204 3.198200 AGCATGATGATGATCTAGGGCTC 59.802 47.826 0.00 0.00 0.00 4.70
204 205 3.182976 AGCATGATGATGATCTAGGGCT 58.817 45.455 0.00 0.00 0.00 5.19
205 206 3.055312 TGAGCATGATGATGATCTAGGGC 60.055 47.826 11.67 0.00 44.05 5.19
206 207 4.820894 TGAGCATGATGATGATCTAGGG 57.179 45.455 11.67 0.00 44.05 3.53
207 208 5.795972 AGTTGAGCATGATGATGATCTAGG 58.204 41.667 11.67 0.00 44.05 3.02
208 209 7.604549 AGTAGTTGAGCATGATGATGATCTAG 58.395 38.462 11.67 0.00 44.05 2.43
209 210 7.536159 AGTAGTTGAGCATGATGATGATCTA 57.464 36.000 11.67 1.12 44.05 1.98
210 211 6.422344 AGTAGTTGAGCATGATGATGATCT 57.578 37.500 11.67 0.00 44.05 2.75
211 212 5.345472 CGAGTAGTTGAGCATGATGATGATC 59.655 44.000 3.23 3.23 44.00 2.92
212 213 5.010415 TCGAGTAGTTGAGCATGATGATGAT 59.990 40.000 0.00 0.00 0.00 2.45
213 214 4.339247 TCGAGTAGTTGAGCATGATGATGA 59.661 41.667 0.00 0.00 0.00 2.92
214 215 4.443725 GTCGAGTAGTTGAGCATGATGATG 59.556 45.833 0.00 0.00 0.00 3.07
215 216 4.340666 AGTCGAGTAGTTGAGCATGATGAT 59.659 41.667 0.00 0.00 0.00 2.45
216 217 3.696548 AGTCGAGTAGTTGAGCATGATGA 59.303 43.478 0.00 0.00 0.00 2.92
217 218 4.039151 AGTCGAGTAGTTGAGCATGATG 57.961 45.455 0.00 0.00 0.00 3.07
218 219 6.039829 TGAATAGTCGAGTAGTTGAGCATGAT 59.960 38.462 6.10 0.00 0.00 2.45
219 220 5.357032 TGAATAGTCGAGTAGTTGAGCATGA 59.643 40.000 6.10 0.00 0.00 3.07
220 221 5.582550 TGAATAGTCGAGTAGTTGAGCATG 58.417 41.667 6.10 0.00 0.00 4.06
221 222 5.836821 TGAATAGTCGAGTAGTTGAGCAT 57.163 39.130 6.10 0.00 0.00 3.79
222 223 5.450550 CCATGAATAGTCGAGTAGTTGAGCA 60.451 44.000 6.10 0.00 0.00 4.26
223 224 4.979197 CCATGAATAGTCGAGTAGTTGAGC 59.021 45.833 6.10 0.00 0.00 4.26
224 225 4.979197 GCCATGAATAGTCGAGTAGTTGAG 59.021 45.833 6.10 0.00 0.00 3.02
225 226 4.202121 GGCCATGAATAGTCGAGTAGTTGA 60.202 45.833 6.10 0.00 0.00 3.18
226 227 4.051922 GGCCATGAATAGTCGAGTAGTTG 58.948 47.826 6.10 0.00 0.00 3.16
227 228 3.961408 AGGCCATGAATAGTCGAGTAGTT 59.039 43.478 5.01 1.05 0.00 2.24
228 229 3.567397 AGGCCATGAATAGTCGAGTAGT 58.433 45.455 5.01 2.63 0.00 2.73
229 230 3.365465 CGAGGCCATGAATAGTCGAGTAG 60.365 52.174 5.01 0.00 0.00 2.57
230 231 2.552743 CGAGGCCATGAATAGTCGAGTA 59.447 50.000 5.01 1.68 0.00 2.59
231 232 1.338337 CGAGGCCATGAATAGTCGAGT 59.662 52.381 5.01 0.00 0.00 4.18
232 233 1.932604 GCGAGGCCATGAATAGTCGAG 60.933 57.143 5.01 0.00 0.00 4.04
233 234 0.032130 GCGAGGCCATGAATAGTCGA 59.968 55.000 5.01 0.00 0.00 4.20
234 235 0.032678 AGCGAGGCCATGAATAGTCG 59.967 55.000 5.01 3.57 0.00 4.18
235 236 1.606737 GGAGCGAGGCCATGAATAGTC 60.607 57.143 5.01 0.00 0.00 2.59
236 237 0.394565 GGAGCGAGGCCATGAATAGT 59.605 55.000 5.01 0.00 0.00 2.12
237 238 0.668706 CGGAGCGAGGCCATGAATAG 60.669 60.000 5.01 0.00 0.00 1.73
238 239 1.367471 CGGAGCGAGGCCATGAATA 59.633 57.895 5.01 0.00 0.00 1.75
239 240 2.109799 CGGAGCGAGGCCATGAAT 59.890 61.111 5.01 0.00 0.00 2.57
264 265 5.105837 GGATAGGCGACGATTTACTAGGAAT 60.106 44.000 0.00 0.00 0.00 3.01
270 271 1.952296 ACGGATAGGCGACGATTTACT 59.048 47.619 0.00 0.00 0.00 2.24
273 274 0.742505 TCACGGATAGGCGACGATTT 59.257 50.000 0.00 0.00 0.00 2.17
275 276 1.653115 GTCACGGATAGGCGACGAT 59.347 57.895 0.00 0.00 0.00 3.73
276 277 2.475466 GGTCACGGATAGGCGACGA 61.475 63.158 0.00 0.00 0.00 4.20
277 278 2.025727 GGTCACGGATAGGCGACG 59.974 66.667 0.00 0.00 0.00 5.12
365 368 3.158676 GGGAGACGATAGCCAAGATAGT 58.841 50.000 0.00 0.00 42.67 2.12
453 456 3.418047 ACCGAAAAAGATCATCCGGTTT 58.582 40.909 0.00 0.00 46.64 3.27
459 462 9.593134 AGCATATATAGACCGAAAAAGATCATC 57.407 33.333 0.00 0.00 0.00 2.92
465 468 6.157211 ACCGAGCATATATAGACCGAAAAAG 58.843 40.000 0.00 0.00 0.00 2.27
482 485 0.752658 CCTACATGGATGACCGAGCA 59.247 55.000 0.00 0.00 39.42 4.26
483 486 0.601311 GCCTACATGGATGACCGAGC 60.601 60.000 0.00 0.00 39.42 5.03
484 487 0.752658 TGCCTACATGGATGACCGAG 59.247 55.000 0.00 0.00 39.42 4.63
487 490 2.301346 CCTTTGCCTACATGGATGACC 58.699 52.381 0.00 0.00 38.35 4.02
494 497 3.058016 CCGAATATGCCTTTGCCTACATG 60.058 47.826 0.00 0.00 36.33 3.21
497 500 2.572290 ACCGAATATGCCTTTGCCTAC 58.428 47.619 0.00 0.00 36.33 3.18
528 531 3.327172 TCTGTGGGTATTTCGGGTTTACA 59.673 43.478 0.00 0.00 0.00 2.41
529 532 3.686241 GTCTGTGGGTATTTCGGGTTTAC 59.314 47.826 0.00 0.00 0.00 2.01
530 533 3.307621 GGTCTGTGGGTATTTCGGGTTTA 60.308 47.826 0.00 0.00 0.00 2.01
533 536 0.616891 GGTCTGTGGGTATTTCGGGT 59.383 55.000 0.00 0.00 0.00 5.28
536 539 2.373540 TTCGGTCTGTGGGTATTTCG 57.626 50.000 0.00 0.00 0.00 3.46
537 540 5.065602 GGTTAATTCGGTCTGTGGGTATTTC 59.934 44.000 0.00 0.00 0.00 2.17
538 541 4.945543 GGTTAATTCGGTCTGTGGGTATTT 59.054 41.667 0.00 0.00 0.00 1.40
539 542 4.019141 TGGTTAATTCGGTCTGTGGGTATT 60.019 41.667 0.00 0.00 0.00 1.89
540 543 3.520317 TGGTTAATTCGGTCTGTGGGTAT 59.480 43.478 0.00 0.00 0.00 2.73
541 544 2.905085 TGGTTAATTCGGTCTGTGGGTA 59.095 45.455 0.00 0.00 0.00 3.69
547 550 3.499157 TCCGTTTTGGTTAATTCGGTCTG 59.501 43.478 0.00 0.00 39.14 3.51
562 565 3.757493 GGGTTTTTGGGTTTTTCCGTTTT 59.243 39.130 0.00 0.00 37.00 2.43
568 571 3.002862 GCATTCGGGTTTTTGGGTTTTTC 59.997 43.478 0.00 0.00 0.00 2.29
573 576 1.476845 GGGCATTCGGGTTTTTGGGT 61.477 55.000 0.00 0.00 0.00 4.51
602 605 3.819188 GAGGCAGGCAAATCCTCG 58.181 61.111 0.00 0.00 45.52 4.63
696 701 0.596600 TCGCCGTGAAGTTGACACTC 60.597 55.000 0.00 0.00 36.29 3.51
899 915 0.912486 ATGAACGGAAGAAGAGGGGG 59.088 55.000 0.00 0.00 0.00 5.40
927 943 2.098280 AGATCAGAATATCCGATCGCCG 59.902 50.000 10.32 0.00 40.39 6.46
929 945 3.358775 CGAGATCAGAATATCCGATCGC 58.641 50.000 10.32 0.00 40.39 4.58
930 946 3.375610 ACCGAGATCAGAATATCCGATCG 59.624 47.826 8.51 8.51 40.39 3.69
957 973 1.463444 CACCGAAAGAACGTTGGGATC 59.537 52.381 5.00 0.00 31.28 3.36
974 990 4.096984 CCTTGGATTATCAAGAGCAACACC 59.903 45.833 6.21 0.00 44.98 4.16
976 992 4.272489 CCCTTGGATTATCAAGAGCAACA 58.728 43.478 6.21 0.00 44.98 3.33
1198 1214 4.357279 AGGCCAGGAGCTTGTGCC 62.357 66.667 5.01 8.87 43.05 5.01
1225 1241 4.549516 GGACGACGAGCCGTAGCC 62.550 72.222 0.00 6.64 43.49 3.93
1342 1365 6.405176 CCAGAAGCCAAAATTACTCAGAATCC 60.405 42.308 0.00 0.00 0.00 3.01
1355 1387 4.753107 CGAACTACTAACCAGAAGCCAAAA 59.247 41.667 0.00 0.00 0.00 2.44
1382 1414 1.303236 CCAATCACTGAACCCGCCA 60.303 57.895 0.00 0.00 0.00 5.69
1388 1420 6.874134 ACAGATAGTACAACCAATCACTGAAC 59.126 38.462 0.00 0.00 0.00 3.18
1400 1432 5.442909 CGACTGCGAAAACAGATAGTACAAC 60.443 44.000 0.00 0.00 40.25 3.32
1405 1437 3.570926 TCGACTGCGAAAACAGATAGT 57.429 42.857 0.00 0.00 44.78 2.12
1418 1450 2.229589 CGCATCTGAGCTCGACTGC 61.230 63.158 18.89 18.89 0.00 4.40
1423 1455 2.220224 CGACACGCATCTGAGCTCG 61.220 63.158 9.64 4.19 0.00 5.03
1441 1473 5.036737 CGCATTCTTATCACAAAACCATCC 58.963 41.667 0.00 0.00 0.00 3.51
1474 1506 4.894784 TGTTCTGGACACATCTAAGGTTC 58.105 43.478 0.00 0.00 32.00 3.62
1525 1557 1.217585 CGATAGCATGGTGAGGCGTG 61.218 60.000 7.89 0.00 32.81 5.34
1640 1673 3.846423 TTGCGCAATCAGAAAAGCATA 57.154 38.095 21.02 0.00 34.44 3.14
1685 1722 1.078567 CTCCACTGGAAGAGGCAGC 60.079 63.158 0.00 0.00 45.13 5.25
1832 1869 7.266125 CGCAGTTCAAAAACAGAAAAAGAAAAC 59.734 33.333 0.00 0.00 37.88 2.43
1837 1875 5.761818 ACGCAGTTCAAAAACAGAAAAAG 57.238 34.783 0.00 0.00 37.78 2.27
1919 1957 5.306937 ACTCACCGTATATCCCATCATTTCA 59.693 40.000 0.00 0.00 0.00 2.69
2053 2293 2.355756 CCATTTCTGTAATCCGCACCAG 59.644 50.000 0.00 0.00 0.00 4.00
2159 2399 8.827177 TGTTGTACTTAATTACTTCAGAGGTG 57.173 34.615 4.80 0.00 0.00 4.00
2171 2411 9.342308 CTGGATACCATGATGTTGTACTTAATT 57.658 33.333 0.00 0.00 30.82 1.40
2172 2412 8.713971 TCTGGATACCATGATGTTGTACTTAAT 58.286 33.333 0.00 0.00 30.82 1.40
2173 2413 8.084985 TCTGGATACCATGATGTTGTACTTAA 57.915 34.615 0.00 0.00 30.82 1.85
2174 2414 7.669089 TCTGGATACCATGATGTTGTACTTA 57.331 36.000 0.00 0.00 30.82 2.24
2325 2568 4.341235 TCAGTTGCGAGCAATACCTATAGT 59.659 41.667 13.89 0.00 38.28 2.12
2404 2647 6.371809 TTTCCTGTTGTCTGTACAATGTTC 57.628 37.500 0.00 0.00 46.84 3.18
2430 2677 2.416972 GGCGAGAAATCGGTAACTCTGT 60.417 50.000 0.00 0.00 0.00 3.41
2437 2684 1.483004 TGATTGGGCGAGAAATCGGTA 59.517 47.619 0.00 0.00 35.89 4.02
2450 2698 7.656707 CAAAATAGAAGTTTTGGTGATTGGG 57.343 36.000 4.62 0.00 42.51 4.12
2484 2734 5.507315 CCGTTAAGGTTGCAAAACAAGATCT 60.507 40.000 0.00 0.00 39.50 2.75
2568 2818 0.034896 ACTGCCCTTGACTTACACGG 59.965 55.000 0.00 0.00 37.61 4.94
2585 2835 1.888512 CTGGCAGCAACACCATTTACT 59.111 47.619 0.00 0.00 34.82 2.24
2634 2884 2.436173 AGGAGAAAGATAAAGGGAGCCG 59.564 50.000 0.00 0.00 0.00 5.52
2640 2890 6.183347 ACAACATGGAGGAGAAAGATAAAGG 58.817 40.000 0.00 0.00 0.00 3.11
2647 2897 7.636150 AAATATGACAACATGGAGGAGAAAG 57.364 36.000 0.00 0.00 37.87 2.62
2711 2961 8.621532 ATGATATCAGTTACGCCAACAATATT 57.378 30.769 11.78 0.00 39.81 1.28
2719 2969 5.529581 TCAAGATGATATCAGTTACGCCA 57.470 39.130 11.78 0.00 0.00 5.69
2772 3023 5.120830 CCAGTTTCGTACTTGAGGAATTCTG 59.879 44.000 5.23 0.23 35.89 3.02
2773 3024 5.221661 ACCAGTTTCGTACTTGAGGAATTCT 60.222 40.000 5.23 0.00 33.85 2.40
2774 3025 4.995487 ACCAGTTTCGTACTTGAGGAATTC 59.005 41.667 0.00 0.00 33.85 2.17
2782 3033 2.476619 CAGAGCACCAGTTTCGTACTTG 59.523 50.000 0.00 0.00 33.85 3.16
2793 3044 2.486982 CCATGAAGAAACAGAGCACCAG 59.513 50.000 0.00 0.00 0.00 4.00
2840 3091 3.434739 CCTGAGGGCAAAGATAGAGCAAT 60.435 47.826 0.00 0.00 0.00 3.56
2843 3094 1.488393 ACCTGAGGGCAAAGATAGAGC 59.512 52.381 2.38 0.00 35.63 4.09
2885 3136 3.119424 TCAGACCGTTGTTGTATGCGATA 60.119 43.478 0.00 0.00 0.00 2.92
2888 3139 1.424403 TCAGACCGTTGTTGTATGCG 58.576 50.000 0.00 0.00 0.00 4.73
2913 3164 0.312729 CCGGTTGGCTTTGGTTGTAC 59.687 55.000 0.00 0.00 0.00 2.90
2999 3250 6.540189 CACTTAATTCTGACAGGAACCTATGG 59.460 42.308 1.81 0.00 0.00 2.74
3018 3269 4.265893 TGTGTGCTTGGAGAAACACTTAA 58.734 39.130 6.38 0.00 42.66 1.85
3042 3315 8.190122 GCCTACAACAAAATGATAATGATGTGA 58.810 33.333 4.35 0.00 33.09 3.58
3088 3363 1.826385 AATCAAACTCCTGGGCTTCG 58.174 50.000 0.00 0.00 0.00 3.79
3103 3378 0.808125 GCATACCACGCACCAAATCA 59.192 50.000 0.00 0.00 0.00 2.57
3157 3432 1.662629 CAAGTCATGAGCAGCTTACCG 59.337 52.381 0.00 0.00 0.00 4.02
3169 3444 7.253420 GCGTAAATTTTATCTGTGCAAGTCATG 60.253 37.037 0.00 0.00 0.00 3.07
3178 3453 5.025826 GGGAACGCGTAAATTTTATCTGTG 58.974 41.667 14.46 0.00 0.00 3.66
3182 3457 5.025826 CACAGGGAACGCGTAAATTTTATC 58.974 41.667 14.46 2.93 0.00 1.75
3191 3466 1.957186 GCAACACAGGGAACGCGTA 60.957 57.895 14.46 0.00 0.00 4.42
3244 3523 8.232913 ACAAGGATTACACAAAACATAACTGT 57.767 30.769 0.00 0.00 37.12 3.55
3285 3571 6.791303 AGCTGAAATTGTAACACGAGAAAAA 58.209 32.000 0.00 0.00 0.00 1.94
3286 3572 6.037720 TGAGCTGAAATTGTAACACGAGAAAA 59.962 34.615 0.00 0.00 0.00 2.29
3293 3579 7.806690 TCTGTATTGAGCTGAAATTGTAACAC 58.193 34.615 0.00 0.00 0.00 3.32
3324 3610 0.320334 TTGCGCGGAACATGAGAAGA 60.320 50.000 9.68 0.00 0.00 2.87
3339 3625 7.112287 TGTTATATCGTGTTCTTTTTGTTTGCG 59.888 33.333 0.00 0.00 0.00 4.85
3406 3705 1.504275 ATTTGGCAGAGCACCTCCCT 61.504 55.000 0.00 0.00 0.00 4.20
3428 3727 6.030849 CAGCATGACAGTAGTTAGTAGTGAC 58.969 44.000 8.72 3.60 39.69 3.67
3443 3796 3.945981 ATGACAAATTGCAGCATGACA 57.054 38.095 0.00 0.00 39.69 3.58
3444 3797 3.991773 ACAATGACAAATTGCAGCATGAC 59.008 39.130 0.00 0.00 38.34 3.06
3446 3799 5.050023 TGAAACAATGACAAATTGCAGCATG 60.050 36.000 0.00 0.00 40.87 4.06
3447 3800 5.049954 GTGAAACAATGACAAATTGCAGCAT 60.050 36.000 0.00 0.00 36.32 3.79
3449 3802 4.508861 AGTGAAACAATGACAAATTGCAGC 59.491 37.500 0.00 0.00 41.43 5.25
3450 3803 5.521010 ACAGTGAAACAATGACAAATTGCAG 59.479 36.000 6.22 0.00 41.43 4.41
3451 3804 5.417811 ACAGTGAAACAATGACAAATTGCA 58.582 33.333 6.22 0.00 41.43 4.08
3452 3805 5.750067 AGACAGTGAAACAATGACAAATTGC 59.250 36.000 6.22 0.00 41.43 3.56
3453 3806 6.753279 ACAGACAGTGAAACAATGACAAATTG 59.247 34.615 6.22 0.00 41.43 2.32
3454 3807 6.866480 ACAGACAGTGAAACAATGACAAATT 58.134 32.000 6.22 0.00 41.43 1.82
3455 3808 6.455360 ACAGACAGTGAAACAATGACAAAT 57.545 33.333 6.22 0.00 41.43 2.32
3456 3809 5.895636 ACAGACAGTGAAACAATGACAAA 57.104 34.783 6.22 0.00 41.43 2.83
3457 3810 5.647658 AGAACAGACAGTGAAACAATGACAA 59.352 36.000 6.22 0.00 41.43 3.18
3458 3811 5.185454 AGAACAGACAGTGAAACAATGACA 58.815 37.500 6.22 0.00 41.43 3.58
3459 3812 5.741388 AGAACAGACAGTGAAACAATGAC 57.259 39.130 6.22 0.43 41.43 3.06
3460 3813 5.758296 GGTAGAACAGACAGTGAAACAATGA 59.242 40.000 6.22 0.00 41.43 2.57
3461 3814 5.333339 CGGTAGAACAGACAGTGAAACAATG 60.333 44.000 0.00 0.00 41.43 2.82
3462 3815 4.750098 CGGTAGAACAGACAGTGAAACAAT 59.250 41.667 0.00 0.00 41.43 2.71
3463 3816 4.116961 CGGTAGAACAGACAGTGAAACAA 58.883 43.478 0.00 0.00 41.43 2.83
3464 3817 3.491964 CCGGTAGAACAGACAGTGAAACA 60.492 47.826 0.00 0.00 41.43 2.83
3465 3818 3.057734 CCGGTAGAACAGACAGTGAAAC 58.942 50.000 0.00 0.00 0.00 2.78
3466 3819 2.696707 ACCGGTAGAACAGACAGTGAAA 59.303 45.455 4.49 0.00 0.00 2.69
3467 3820 2.313317 ACCGGTAGAACAGACAGTGAA 58.687 47.619 4.49 0.00 0.00 3.18
3468 3821 1.991121 ACCGGTAGAACAGACAGTGA 58.009 50.000 4.49 0.00 0.00 3.41
3469 3822 2.818432 AGTACCGGTAGAACAGACAGTG 59.182 50.000 16.41 0.00 0.00 3.66
3470 3823 2.818432 CAGTACCGGTAGAACAGACAGT 59.182 50.000 16.41 0.00 0.00 3.55
3471 3824 3.079578 TCAGTACCGGTAGAACAGACAG 58.920 50.000 16.41 0.50 0.00 3.51
3472 3825 2.816087 GTCAGTACCGGTAGAACAGACA 59.184 50.000 16.41 0.00 31.97 3.41
3473 3826 2.816087 TGTCAGTACCGGTAGAACAGAC 59.184 50.000 16.41 18.24 32.22 3.51
3474 3827 3.144657 TGTCAGTACCGGTAGAACAGA 57.855 47.619 16.41 5.71 0.00 3.41
3475 3828 3.928727 TTGTCAGTACCGGTAGAACAG 57.071 47.619 16.41 2.96 0.00 3.16
3476 3829 4.877378 AATTGTCAGTACCGGTAGAACA 57.123 40.909 16.41 16.12 0.00 3.18
3477 3830 5.697633 TGAAAATTGTCAGTACCGGTAGAAC 59.302 40.000 16.41 13.67 0.00 3.01
3478 3831 5.856156 TGAAAATTGTCAGTACCGGTAGAA 58.144 37.500 16.41 0.00 0.00 2.10
3479 3832 5.471556 TGAAAATTGTCAGTACCGGTAGA 57.528 39.130 16.41 7.05 0.00 2.59
3480 3833 6.737254 AATGAAAATTGTCAGTACCGGTAG 57.263 37.500 16.41 4.29 0.00 3.18
3481 3834 7.013464 ACAAAATGAAAATTGTCAGTACCGGTA 59.987 33.333 11.16 11.16 34.84 4.02
3482 3835 6.183360 ACAAAATGAAAATTGTCAGTACCGGT 60.183 34.615 13.98 13.98 34.84 5.28
3483 3836 6.212955 ACAAAATGAAAATTGTCAGTACCGG 58.787 36.000 4.31 0.00 34.84 5.28
3494 3847 9.374838 GGCTCTGATTATGACAAAATGAAAATT 57.625 29.630 0.00 0.00 0.00 1.82
3495 3848 8.755977 AGGCTCTGATTATGACAAAATGAAAAT 58.244 29.630 0.00 0.00 0.00 1.82
3496 3849 8.030692 CAGGCTCTGATTATGACAAAATGAAAA 58.969 33.333 0.00 0.00 32.44 2.29
3497 3850 7.541162 CAGGCTCTGATTATGACAAAATGAAA 58.459 34.615 0.00 0.00 32.44 2.69
3498 3851 6.405065 GCAGGCTCTGATTATGACAAAATGAA 60.405 38.462 6.40 0.00 32.44 2.57
3499 3852 5.066893 GCAGGCTCTGATTATGACAAAATGA 59.933 40.000 6.40 0.00 32.44 2.57
3500 3853 5.067413 AGCAGGCTCTGATTATGACAAAATG 59.933 40.000 6.40 0.00 32.44 2.32
3501 3854 5.067413 CAGCAGGCTCTGATTATGACAAAAT 59.933 40.000 6.40 0.00 36.19 1.82
3502 3855 4.397103 CAGCAGGCTCTGATTATGACAAAA 59.603 41.667 6.40 0.00 36.19 2.44
3523 3876 2.832129 AGGTCACTATGTACACCACCAG 59.168 50.000 0.00 0.00 0.00 4.00
3527 3880 3.558321 GGCAAAGGTCACTATGTACACCA 60.558 47.826 0.00 0.00 0.00 4.17
3557 3910 4.934001 TCTTGATGTTTGCTAGAGCTTCTG 59.066 41.667 2.72 0.00 42.66 3.02
3720 4073 5.278808 GGTGGGAATAAAGGTGAAACAGAAC 60.279 44.000 0.00 0.00 39.98 3.01
3724 4077 3.892588 GTGGTGGGAATAAAGGTGAAACA 59.107 43.478 0.00 0.00 39.98 2.83
3736 4090 1.848886 GACGAAGGGGTGGTGGGAAT 61.849 60.000 0.00 0.00 0.00 3.01
3739 4093 4.029809 GGACGAAGGGGTGGTGGG 62.030 72.222 0.00 0.00 0.00 4.61
3740 4094 2.824880 TTGGACGAAGGGGTGGTGG 61.825 63.158 0.00 0.00 0.00 4.61
3743 4097 1.599797 GTGTTGGACGAAGGGGTGG 60.600 63.158 0.00 0.00 0.00 4.61
3784 4271 9.643693 TTAGTTCAGAAGGTACGTTAATTAAGG 57.356 33.333 14.73 14.73 0.00 2.69
3884 4682 3.014623 GGTGGGAATAAAGGAGAAACGG 58.985 50.000 0.00 0.00 0.00 4.44
3886 4684 3.762288 GGTGGTGGGAATAAAGGAGAAAC 59.238 47.826 0.00 0.00 0.00 2.78
3891 4689 1.004436 GGGGTGGTGGGAATAAAGGA 58.996 55.000 0.00 0.00 0.00 3.36
3897 4695 1.848886 GACGAAGGGGTGGTGGGAAT 61.849 60.000 0.00 0.00 0.00 3.01
3900 4698 4.029809 GGACGAAGGGGTGGTGGG 62.030 72.222 0.00 0.00 0.00 4.61
3901 4699 2.824880 TTGGACGAAGGGGTGGTGG 61.825 63.158 0.00 0.00 0.00 4.61
3904 4702 2.033602 GGTTGGACGAAGGGGTGG 59.966 66.667 0.00 0.00 0.00 4.61
3910 4708 0.317479 ACGGAGAAGGTTGGACGAAG 59.683 55.000 0.00 0.00 0.00 3.79
3925 4723 7.788026 ACTAAGGTGATTGATTATTACACGGA 58.212 34.615 0.00 0.00 33.08 4.69
3940 4738 8.375493 TCAGAAGGTATGTAAACTAAGGTGAT 57.625 34.615 0.00 0.00 0.00 3.06
3941 4739 7.786046 TCAGAAGGTATGTAAACTAAGGTGA 57.214 36.000 0.00 0.00 0.00 4.02
3942 4740 8.095169 AGTTCAGAAGGTATGTAAACTAAGGTG 58.905 37.037 0.00 0.00 0.00 4.00
3943 4741 8.203681 AGTTCAGAAGGTATGTAAACTAAGGT 57.796 34.615 0.00 0.00 0.00 3.50
4026 4836 9.278978 TGGTATGCGATTGTATACATAAATGTT 57.721 29.630 19.30 0.00 43.18 2.71
4035 4845 3.374058 GCCCATGGTATGCGATTGTATAC 59.626 47.826 11.73 11.67 41.38 1.47
4038 4848 1.141858 TGCCCATGGTATGCGATTGTA 59.858 47.619 11.73 0.00 0.00 2.41
4051 4861 5.128205 TCAGAAGTGATTTATCTGCCCATG 58.872 41.667 0.00 0.00 40.26 3.66
4052 4862 5.378230 TCAGAAGTGATTTATCTGCCCAT 57.622 39.130 0.00 0.00 40.26 4.00
4054 4864 5.371526 TGATCAGAAGTGATTTATCTGCCC 58.628 41.667 0.00 0.00 43.92 5.36
4055 4865 6.932356 TTGATCAGAAGTGATTTATCTGCC 57.068 37.500 0.00 0.00 43.92 4.85
4184 4994 3.600694 AATGCCCGTGCGTTGCAA 61.601 55.556 0.00 0.00 44.90 4.08
4190 5000 1.019278 ACTAGAACAATGCCCGTGCG 61.019 55.000 0.00 0.00 41.78 5.34
4218 5028 9.847224 GGTAGTCATTTGATTCCCTAAAAGATA 57.153 33.333 0.00 0.00 0.00 1.98
4219 5029 8.560903 AGGTAGTCATTTGATTCCCTAAAAGAT 58.439 33.333 0.00 0.00 0.00 2.40
4220 5030 7.928873 AGGTAGTCATTTGATTCCCTAAAAGA 58.071 34.615 0.00 0.00 0.00 2.52
4221 5031 8.581253 AAGGTAGTCATTTGATTCCCTAAAAG 57.419 34.615 0.00 0.00 0.00 2.27
4222 5032 9.681062 CTAAGGTAGTCATTTGATTCCCTAAAA 57.319 33.333 0.00 0.00 0.00 1.52
4223 5033 7.773690 GCTAAGGTAGTCATTTGATTCCCTAAA 59.226 37.037 0.00 0.00 0.00 1.85
4224 5034 7.127339 AGCTAAGGTAGTCATTTGATTCCCTAA 59.873 37.037 0.00 0.00 0.00 2.69
4225 5035 6.615726 AGCTAAGGTAGTCATTTGATTCCCTA 59.384 38.462 0.00 0.00 0.00 3.53
4226 5036 5.430089 AGCTAAGGTAGTCATTTGATTCCCT 59.570 40.000 0.00 0.00 0.00 4.20
4227 5037 5.685728 AGCTAAGGTAGTCATTTGATTCCC 58.314 41.667 0.00 0.00 0.00 3.97
4228 5038 5.760743 GGAGCTAAGGTAGTCATTTGATTCC 59.239 44.000 0.00 0.00 0.00 3.01
4229 5039 5.463724 CGGAGCTAAGGTAGTCATTTGATTC 59.536 44.000 0.00 0.00 0.00 2.52
4230 5040 5.128827 TCGGAGCTAAGGTAGTCATTTGATT 59.871 40.000 0.00 0.00 0.00 2.57
4231 5041 4.649674 TCGGAGCTAAGGTAGTCATTTGAT 59.350 41.667 0.00 0.00 0.00 2.57
4232 5042 4.021229 TCGGAGCTAAGGTAGTCATTTGA 58.979 43.478 0.00 0.00 0.00 2.69
4233 5043 4.386867 TCGGAGCTAAGGTAGTCATTTG 57.613 45.455 0.00 0.00 0.00 2.32
4234 5044 4.406003 ACATCGGAGCTAAGGTAGTCATTT 59.594 41.667 0.00 0.00 0.00 2.32
4235 5045 3.961408 ACATCGGAGCTAAGGTAGTCATT 59.039 43.478 0.00 0.00 0.00 2.57
4236 5046 3.567397 ACATCGGAGCTAAGGTAGTCAT 58.433 45.455 0.00 0.00 0.00 3.06
4237 5047 3.014304 ACATCGGAGCTAAGGTAGTCA 57.986 47.619 0.00 0.00 0.00 3.41
4238 5048 5.298777 TCTTTACATCGGAGCTAAGGTAGTC 59.701 44.000 0.00 0.00 0.00 2.59
4239 5049 5.198965 TCTTTACATCGGAGCTAAGGTAGT 58.801 41.667 0.00 0.00 0.00 2.73
4240 5050 5.769484 TCTTTACATCGGAGCTAAGGTAG 57.231 43.478 0.00 0.00 0.00 3.18
4241 5051 8.418597 AATATCTTTACATCGGAGCTAAGGTA 57.581 34.615 0.00 0.00 0.00 3.08
4242 5052 6.919775 ATATCTTTACATCGGAGCTAAGGT 57.080 37.500 0.00 0.00 0.00 3.50
4243 5053 6.814146 GGAATATCTTTACATCGGAGCTAAGG 59.186 42.308 0.00 0.00 0.00 2.69
4244 5054 7.378966 TGGAATATCTTTACATCGGAGCTAAG 58.621 38.462 0.00 0.00 0.00 2.18
4245 5055 7.232737 TCTGGAATATCTTTACATCGGAGCTAA 59.767 37.037 0.00 0.00 0.00 3.09
4246 5056 6.719829 TCTGGAATATCTTTACATCGGAGCTA 59.280 38.462 0.00 0.00 0.00 3.32
4247 5057 5.540337 TCTGGAATATCTTTACATCGGAGCT 59.460 40.000 0.00 0.00 0.00 4.09
4248 5058 5.635700 GTCTGGAATATCTTTACATCGGAGC 59.364 44.000 0.00 0.00 0.00 4.70
4249 5059 5.859114 CGTCTGGAATATCTTTACATCGGAG 59.141 44.000 0.00 0.00 0.00 4.63
4250 5060 5.769367 CGTCTGGAATATCTTTACATCGGA 58.231 41.667 0.00 0.00 0.00 4.55
4251 5061 4.386049 GCGTCTGGAATATCTTTACATCGG 59.614 45.833 0.00 0.00 0.00 4.18
4252 5062 4.982295 TGCGTCTGGAATATCTTTACATCG 59.018 41.667 0.00 0.00 0.00 3.84
4253 5063 6.844696 TTGCGTCTGGAATATCTTTACATC 57.155 37.500 0.00 0.00 0.00 3.06
4254 5064 8.150945 AGTATTGCGTCTGGAATATCTTTACAT 58.849 33.333 0.00 0.00 40.02 2.29
4255 5065 7.438160 CAGTATTGCGTCTGGAATATCTTTACA 59.562 37.037 0.00 0.00 40.02 2.41
4256 5066 7.652105 TCAGTATTGCGTCTGGAATATCTTTAC 59.348 37.037 0.00 0.00 40.02 2.01
4257 5067 7.722363 TCAGTATTGCGTCTGGAATATCTTTA 58.278 34.615 0.00 0.00 40.02 1.85
4258 5068 6.582636 TCAGTATTGCGTCTGGAATATCTTT 58.417 36.000 0.00 0.00 40.02 2.52
4259 5069 6.161855 TCAGTATTGCGTCTGGAATATCTT 57.838 37.500 0.00 0.00 40.02 2.40
4260 5070 5.791336 TCAGTATTGCGTCTGGAATATCT 57.209 39.130 0.00 0.00 40.02 1.98
4261 5071 7.486551 GTCTATCAGTATTGCGTCTGGAATATC 59.513 40.741 0.00 0.00 40.02 1.63
4262 5072 7.039714 TGTCTATCAGTATTGCGTCTGGAATAT 60.040 37.037 0.00 0.00 40.02 1.28
4263 5073 6.264518 TGTCTATCAGTATTGCGTCTGGAATA 59.735 38.462 0.00 0.00 37.35 1.75
4264 5074 5.069119 TGTCTATCAGTATTGCGTCTGGAAT 59.931 40.000 0.00 0.00 39.66 3.01
4265 5075 4.401202 TGTCTATCAGTATTGCGTCTGGAA 59.599 41.667 0.00 0.00 33.13 3.53
4266 5076 3.951680 TGTCTATCAGTATTGCGTCTGGA 59.048 43.478 0.00 0.00 33.13 3.86
4267 5077 4.307443 TGTCTATCAGTATTGCGTCTGG 57.693 45.455 0.00 0.00 33.13 3.86
4268 5078 5.284864 ACATGTCTATCAGTATTGCGTCTG 58.715 41.667 0.00 0.00 0.00 3.51
4269 5079 5.521906 ACATGTCTATCAGTATTGCGTCT 57.478 39.130 0.00 0.00 0.00 4.18
4270 5080 6.360947 CAGTACATGTCTATCAGTATTGCGTC 59.639 42.308 0.00 0.00 0.00 5.19
4271 5081 6.209361 CAGTACATGTCTATCAGTATTGCGT 58.791 40.000 0.00 0.00 0.00 5.24
4272 5082 5.117745 GCAGTACATGTCTATCAGTATTGCG 59.882 44.000 0.00 0.00 39.31 4.85
4273 5083 5.985530 TGCAGTACATGTCTATCAGTATTGC 59.014 40.000 0.00 10.65 44.98 3.56
4274 5084 8.599055 AATGCAGTACATGTCTATCAGTATTG 57.401 34.615 0.00 0.00 39.60 1.90
4275 5085 9.265901 GAAATGCAGTACATGTCTATCAGTATT 57.734 33.333 0.00 0.00 39.60 1.89
4276 5086 8.424133 TGAAATGCAGTACATGTCTATCAGTAT 58.576 33.333 0.00 0.00 42.74 2.12
4277 5087 7.781056 TGAAATGCAGTACATGTCTATCAGTA 58.219 34.615 0.00 0.00 42.74 2.74
4278 5088 6.643388 TGAAATGCAGTACATGTCTATCAGT 58.357 36.000 0.00 0.00 42.74 3.41
4279 5089 7.543947 TTGAAATGCAGTACATGTCTATCAG 57.456 36.000 0.00 0.00 42.74 2.90
4280 5090 9.045223 GTATTGAAATGCAGTACATGTCTATCA 57.955 33.333 0.00 0.00 42.74 2.15
4281 5091 9.265901 AGTATTGAAATGCAGTACATGTCTATC 57.734 33.333 0.00 0.00 42.74 2.08
4286 5096 8.993121 GCTATAGTATTGAAATGCAGTACATGT 58.007 33.333 2.69 2.69 40.89 3.21
4287 5097 8.446273 GGCTATAGTATTGAAATGCAGTACATG 58.554 37.037 0.84 0.00 40.89 3.21
4288 5098 7.331934 CGGCTATAGTATTGAAATGCAGTACAT 59.668 37.037 0.84 0.00 40.89 2.29
4289 5099 6.645003 CGGCTATAGTATTGAAATGCAGTACA 59.355 38.462 0.84 0.00 40.89 2.90
4290 5100 6.090898 CCGGCTATAGTATTGAAATGCAGTAC 59.909 42.308 0.84 0.00 39.30 2.73
4291 5101 6.163476 CCGGCTATAGTATTGAAATGCAGTA 58.837 40.000 0.84 0.00 0.00 2.74
4292 5102 4.997395 CCGGCTATAGTATTGAAATGCAGT 59.003 41.667 0.84 0.00 0.00 4.40
4293 5103 4.997395 ACCGGCTATAGTATTGAAATGCAG 59.003 41.667 0.00 0.00 0.00 4.41
4294 5104 4.754618 CACCGGCTATAGTATTGAAATGCA 59.245 41.667 0.00 0.00 0.00 3.96
4295 5105 4.755123 ACACCGGCTATAGTATTGAAATGC 59.245 41.667 0.00 0.00 0.00 3.56
4296 5106 7.152645 ACTACACCGGCTATAGTATTGAAATG 58.847 38.462 0.00 0.00 0.00 2.32
4297 5107 7.299246 ACTACACCGGCTATAGTATTGAAAT 57.701 36.000 0.00 0.00 0.00 2.17
4298 5108 6.720112 ACTACACCGGCTATAGTATTGAAA 57.280 37.500 0.00 0.00 0.00 2.69
4299 5109 7.520453 CGTTACTACACCGGCTATAGTATTGAA 60.520 40.741 16.59 5.50 32.77 2.69
4300 5110 6.073058 CGTTACTACACCGGCTATAGTATTGA 60.073 42.308 16.59 4.40 32.77 2.57
4301 5111 6.082338 CGTTACTACACCGGCTATAGTATTG 58.918 44.000 16.59 10.70 32.77 1.90
4302 5112 5.182001 CCGTTACTACACCGGCTATAGTATT 59.818 44.000 16.59 4.58 32.77 1.89
4303 5113 4.697352 CCGTTACTACACCGGCTATAGTAT 59.303 45.833 16.59 0.00 32.77 2.12
4304 5114 4.065088 CCGTTACTACACCGGCTATAGTA 58.935 47.826 13.42 13.42 34.62 1.82
4305 5115 2.880890 CCGTTACTACACCGGCTATAGT 59.119 50.000 15.06 15.06 34.62 2.12
4306 5116 3.058639 GTCCGTTACTACACCGGCTATAG 60.059 52.174 0.00 3.21 41.46 1.31
4307 5117 2.878406 GTCCGTTACTACACCGGCTATA 59.122 50.000 0.00 0.00 41.46 1.31
4308 5118 1.678101 GTCCGTTACTACACCGGCTAT 59.322 52.381 0.00 0.00 41.46 2.97
4309 5119 1.094785 GTCCGTTACTACACCGGCTA 58.905 55.000 0.00 0.00 41.46 3.93
4310 5120 0.895100 TGTCCGTTACTACACCGGCT 60.895 55.000 0.00 0.00 41.46 5.52
4311 5121 0.174162 ATGTCCGTTACTACACCGGC 59.826 55.000 0.00 0.00 41.46 6.13
4312 5122 2.223572 GGTATGTCCGTTACTACACCGG 60.224 54.545 0.00 0.00 43.03 5.28
4313 5123 2.423185 TGGTATGTCCGTTACTACACCG 59.577 50.000 0.00 0.00 39.52 4.94
4314 5124 4.454728 TTGGTATGTCCGTTACTACACC 57.545 45.455 0.00 0.00 39.52 4.16
4315 5125 5.473039 AGTTTGGTATGTCCGTTACTACAC 58.527 41.667 0.00 0.00 39.52 2.90
4316 5126 5.726980 AGTTTGGTATGTCCGTTACTACA 57.273 39.130 0.00 0.00 39.52 2.74
4317 5127 6.393171 AGAAGTTTGGTATGTCCGTTACTAC 58.607 40.000 0.00 0.00 39.52 2.73
4318 5128 6.594788 AGAAGTTTGGTATGTCCGTTACTA 57.405 37.500 0.00 0.00 39.52 1.82
4319 5129 5.479124 AGAAGTTTGGTATGTCCGTTACT 57.521 39.130 0.00 0.00 39.52 2.24
4320 5130 6.624423 TCTAGAAGTTTGGTATGTCCGTTAC 58.376 40.000 0.00 0.00 39.52 2.50
4321 5131 6.435277 ACTCTAGAAGTTTGGTATGTCCGTTA 59.565 38.462 0.00 0.00 34.85 3.18
4322 5132 5.245526 ACTCTAGAAGTTTGGTATGTCCGTT 59.754 40.000 0.00 0.00 34.85 4.44
4323 5133 4.771054 ACTCTAGAAGTTTGGTATGTCCGT 59.229 41.667 0.00 0.00 34.85 4.69
4324 5134 5.326200 ACTCTAGAAGTTTGGTATGTCCG 57.674 43.478 0.00 0.00 34.85 4.79
4325 5135 7.040494 GGTTACTCTAGAAGTTTGGTATGTCC 58.960 42.308 0.00 0.00 39.55 4.02
4326 5136 7.544915 GTGGTTACTCTAGAAGTTTGGTATGTC 59.455 40.741 0.00 0.00 39.55 3.06
4327 5137 7.384477 GTGGTTACTCTAGAAGTTTGGTATGT 58.616 38.462 0.00 0.00 39.55 2.29
4328 5138 6.817140 GGTGGTTACTCTAGAAGTTTGGTATG 59.183 42.308 0.00 0.00 39.55 2.39
4329 5139 6.499350 TGGTGGTTACTCTAGAAGTTTGGTAT 59.501 38.462 0.00 0.00 39.55 2.73
4330 5140 5.840149 TGGTGGTTACTCTAGAAGTTTGGTA 59.160 40.000 0.00 0.00 39.55 3.25
4331 5141 4.657039 TGGTGGTTACTCTAGAAGTTTGGT 59.343 41.667 0.00 0.00 39.55 3.67
4332 5142 5.223449 TGGTGGTTACTCTAGAAGTTTGG 57.777 43.478 0.00 0.00 39.55 3.28
4333 5143 7.333672 GGTTATGGTGGTTACTCTAGAAGTTTG 59.666 40.741 0.00 0.00 39.55 2.93
4334 5144 7.016858 TGGTTATGGTGGTTACTCTAGAAGTTT 59.983 37.037 0.00 0.00 39.55 2.66
4335 5145 6.499350 TGGTTATGGTGGTTACTCTAGAAGTT 59.501 38.462 0.00 0.00 39.55 2.66
4336 5146 6.021030 TGGTTATGGTGGTTACTCTAGAAGT 58.979 40.000 0.00 0.00 42.33 3.01
4337 5147 6.540438 TGGTTATGGTGGTTACTCTAGAAG 57.460 41.667 0.00 0.00 0.00 2.85
4338 5148 6.499350 ACTTGGTTATGGTGGTTACTCTAGAA 59.501 38.462 0.00 0.00 0.00 2.10
4339 5149 6.021030 ACTTGGTTATGGTGGTTACTCTAGA 58.979 40.000 0.00 0.00 0.00 2.43
4340 5150 6.295719 ACTTGGTTATGGTGGTTACTCTAG 57.704 41.667 0.00 0.00 0.00 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.