Multiple sequence alignment - TraesCS6B01G397900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G397900 chr6B 100.000 4609 0 0 1 4609 673674636 673679244 0.000000e+00 8512.0
1 TraesCS6B01G397900 chr6B 95.637 2888 90 8 983 3841 672636462 672633582 0.000000e+00 4602.0
2 TraesCS6B01G397900 chr6B 84.955 1449 192 19 1505 2935 672680764 672682204 0.000000e+00 1445.0
3 TraesCS6B01G397900 chr6B 86.348 1172 148 8 2034 3197 673365649 673364482 0.000000e+00 1267.0
4 TraesCS6B01G397900 chr6B 87.841 954 114 2 2026 2977 672506931 672505978 0.000000e+00 1118.0
5 TraesCS6B01G397900 chr6B 87.686 942 105 6 2034 2966 673757597 673758536 0.000000e+00 1086.0
6 TraesCS6B01G397900 chr6B 85.497 986 127 11 2026 3003 672894352 672895329 0.000000e+00 1014.0
7 TraesCS6B01G397900 chr6B 88.166 769 79 6 3085 3841 672505949 672505181 0.000000e+00 905.0
8 TraesCS6B01G397900 chr6B 84.232 742 78 21 3085 3806 672682254 672682976 0.000000e+00 686.0
9 TraesCS6B01G397900 chr6B 86.004 493 66 2 3085 3574 672619490 672618998 4.090000e-145 525.0
10 TraesCS6B01G397900 chr6B 86.469 473 59 4 3082 3550 673698552 673699023 8.840000e-142 514.0
11 TraesCS6B01G397900 chr6B 90.598 351 30 1 995 1345 672883343 672883690 3.250000e-126 462.0
12 TraesCS6B01G397900 chr6B 88.418 354 36 4 993 1345 672507960 672507611 5.510000e-114 422.0
13 TraesCS6B01G397900 chr6B 85.042 361 37 12 986 1345 673696411 673696755 7.340000e-93 351.0
14 TraesCS6B01G397900 chr6B 83.123 397 54 8 1504 1889 673757075 673757469 2.640000e-92 350.0
15 TraesCS6B01G397900 chr6B 82.382 403 62 2 1512 1905 672883861 672884263 4.420000e-90 342.0
16 TraesCS6B01G397900 chr6B 84.211 361 40 12 986 1345 672621670 672621326 7.390000e-88 335.0
17 TraesCS6B01G397900 chr6B 97.297 148 4 0 792 939 672636611 672636464 7.660000e-63 252.0
18 TraesCS6B01G397900 chr6B 85.366 82 12 0 1345 1426 673696780 673696861 8.220000e-13 86.1
19 TraesCS6B01G397900 chr6B 85.507 69 10 0 1359 1427 672621287 672621219 6.400000e-09 73.1
20 TraesCS6B01G397900 chr6D 95.321 3099 80 15 783 3841 445825967 445822894 0.000000e+00 4859.0
21 TraesCS6B01G397900 chr6D 84.983 1485 170 21 2034 3504 445956279 445957724 0.000000e+00 1458.0
22 TraesCS6B01G397900 chr6D 85.484 992 124 14 2021 3003 445893797 445894777 0.000000e+00 1016.0
23 TraesCS6B01G397900 chr6D 85.743 498 68 2 3080 3574 445810790 445810293 1.470000e-144 523.0
24 TraesCS6B01G397900 chr6D 83.431 513 48 16 852 1342 445838018 445838515 4.230000e-120 442.0
25 TraesCS6B01G397900 chr6D 85.000 360 39 10 986 1345 445812953 445812609 7.340000e-93 351.0
26 TraesCS6B01G397900 chr6D 82.368 397 57 8 1504 1889 445799405 445799011 2.660000e-87 333.0
27 TraesCS6B01G397900 chr6D 91.160 181 11 3 3839 4018 445822803 445822627 1.660000e-59 241.0
28 TraesCS6B01G397900 chr6D 86.747 83 11 0 1345 1427 445812584 445812502 4.910000e-15 93.5
29 TraesCS6B01G397900 chr6A 88.775 1461 158 4 1512 2970 592501351 592499895 0.000000e+00 1784.0
30 TraesCS6B01G397900 chr6A 86.078 1020 128 9 1976 2988 592477423 592476411 0.000000e+00 1085.0
31 TraesCS6B01G397900 chr6A 81.974 760 79 25 3086 3841 592499761 592499056 3.970000e-165 592.0
32 TraesCS6B01G397900 chr6A 85.913 504 59 8 3080 3574 592492954 592492454 1.140000e-145 527.0
33 TraesCS6B01G397900 chr6A 87.464 351 41 1 995 1345 592478564 592478217 7.180000e-108 401.0
34 TraesCS6B01G397900 chr6A 82.282 412 62 6 1504 1905 592494493 592494083 3.410000e-91 346.0
35 TraesCS6B01G397900 chr6A 84.444 360 41 7 986 1345 592501863 592501519 1.590000e-89 340.0
36 TraesCS6B01G397900 chr2B 98.462 780 12 0 1 780 39204766 39203987 0.000000e+00 1375.0
37 TraesCS6B01G397900 chr2A 98.207 781 11 1 1 778 733430787 733430007 0.000000e+00 1362.0
38 TraesCS6B01G397900 chr2A 96.282 780 29 0 1 780 759529073 759528294 0.000000e+00 1280.0
39 TraesCS6B01G397900 chr5B 98.196 776 14 0 1 776 471017245 471016470 0.000000e+00 1356.0
40 TraesCS6B01G397900 chr3D 92.949 780 54 1 1 780 565003608 565002830 0.000000e+00 1134.0
41 TraesCS6B01G397900 chr7D 91.847 785 42 6 1 782 77045118 77045883 0.000000e+00 1075.0
42 TraesCS6B01G397900 chr7D 92.063 63 4 1 719 780 531068298 531068236 2.280000e-13 87.9
43 TraesCS6B01G397900 chr7A 85.185 243 36 0 1505 1747 97405867 97405625 2.750000e-62 250.0
44 TraesCS6B01G397900 chr7B 96.154 52 1 1 731 781 677082172 677082121 2.960000e-12 84.2
45 TraesCS6B01G397900 chr1B 91.525 59 3 2 728 784 573261758 573261816 3.820000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G397900 chr6B 673674636 673679244 4608 False 8512.000000 8512 100.000000 1 4609 1 chr6B.!!$F2 4608
1 TraesCS6B01G397900 chr6B 672633582 672636611 3029 True 2427.000000 4602 96.467000 792 3841 2 chr6B.!!$R4 3049
2 TraesCS6B01G397900 chr6B 673364482 673365649 1167 True 1267.000000 1267 86.348000 2034 3197 1 chr6B.!!$R1 1163
3 TraesCS6B01G397900 chr6B 672680764 672682976 2212 False 1065.500000 1445 84.593500 1505 3806 2 chr6B.!!$F3 2301
4 TraesCS6B01G397900 chr6B 672894352 672895329 977 False 1014.000000 1014 85.497000 2026 3003 1 chr6B.!!$F1 977
5 TraesCS6B01G397900 chr6B 672505181 672507960 2779 True 815.000000 1118 88.141667 993 3841 3 chr6B.!!$R2 2848
6 TraesCS6B01G397900 chr6B 673757075 673758536 1461 False 718.000000 1086 85.404500 1504 2966 2 chr6B.!!$F6 1462
7 TraesCS6B01G397900 chr6B 672883343 672884263 920 False 402.000000 462 86.490000 995 1905 2 chr6B.!!$F4 910
8 TraesCS6B01G397900 chr6B 673696411 673699023 2612 False 317.033333 514 85.625667 986 3550 3 chr6B.!!$F5 2564
9 TraesCS6B01G397900 chr6B 672618998 672621670 2672 True 311.033333 525 85.240667 986 3574 3 chr6B.!!$R3 2588
10 TraesCS6B01G397900 chr6D 445822627 445825967 3340 True 2550.000000 4859 93.240500 783 4018 2 chr6D.!!$R3 3235
11 TraesCS6B01G397900 chr6D 445956279 445957724 1445 False 1458.000000 1458 84.983000 2034 3504 1 chr6D.!!$F3 1470
12 TraesCS6B01G397900 chr6D 445893797 445894777 980 False 1016.000000 1016 85.484000 2021 3003 1 chr6D.!!$F2 982
13 TraesCS6B01G397900 chr6D 445810293 445812953 2660 True 322.500000 523 85.830000 986 3574 3 chr6D.!!$R2 2588
14 TraesCS6B01G397900 chr6A 592499056 592501863 2807 True 905.333333 1784 85.064333 986 3841 3 chr6A.!!$R3 2855
15 TraesCS6B01G397900 chr6A 592476411 592478564 2153 True 743.000000 1085 86.771000 995 2988 2 chr6A.!!$R1 1993
16 TraesCS6B01G397900 chr6A 592492454 592494493 2039 True 436.500000 527 84.097500 1504 3574 2 chr6A.!!$R2 2070
17 TraesCS6B01G397900 chr2B 39203987 39204766 779 True 1375.000000 1375 98.462000 1 780 1 chr2B.!!$R1 779
18 TraesCS6B01G397900 chr2A 733430007 733430787 780 True 1362.000000 1362 98.207000 1 778 1 chr2A.!!$R1 777
19 TraesCS6B01G397900 chr2A 759528294 759529073 779 True 1280.000000 1280 96.282000 1 780 1 chr2A.!!$R2 779
20 TraesCS6B01G397900 chr5B 471016470 471017245 775 True 1356.000000 1356 98.196000 1 776 1 chr5B.!!$R1 775
21 TraesCS6B01G397900 chr3D 565002830 565003608 778 True 1134.000000 1134 92.949000 1 780 1 chr3D.!!$R1 779
22 TraesCS6B01G397900 chr7D 77045118 77045883 765 False 1075.000000 1075 91.847000 1 782 1 chr7D.!!$F1 781

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
499 503 1.051008 ACATCGCCTGGCATCTATGA 58.949 50.0 20.29 6.83 0.00 2.15 F
1262 1269 0.603569 GCACGACAAGGAGAAGGAGA 59.396 55.0 0.00 0.00 0.00 3.71 F
2261 2638 0.607217 TCCTCACGACCAACGCTAGA 60.607 55.0 0.00 0.00 46.94 2.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1963 2223 1.037493 TCGTACCTGTGCTGAGTTGT 58.963 50.0 0.0 0.0 0.0 3.32 R
3023 3415 0.322456 TGTTGCCATCTTCCTTCCCG 60.322 55.0 0.0 0.0 0.0 5.14 R
4155 4767 0.035152 AGATTGCACCGCTTCCATGA 60.035 50.0 0.0 0.0 0.0 3.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
204 208 4.142381 GGTGAAATTCTACATGTGGCTTCC 60.142 45.833 9.11 4.22 0.00 3.46
457 461 3.050275 GCACCAGCAAGGACGGAC 61.050 66.667 1.83 0.00 41.22 4.79
499 503 1.051008 ACATCGCCTGGCATCTATGA 58.949 50.000 20.29 6.83 0.00 2.15
598 602 3.423539 ACATTGCTCAGTGAGGCTTTA 57.576 42.857 21.54 5.09 0.00 1.85
600 604 4.144297 ACATTGCTCAGTGAGGCTTTAAA 58.856 39.130 21.54 5.21 0.00 1.52
692 699 2.070783 GTGTTCGTTTTATGCTCGGGA 58.929 47.619 0.00 0.00 0.00 5.14
892 899 6.314648 TGCATCACAGTATTAAGAAAGAGCAG 59.685 38.462 0.00 0.00 0.00 4.24
903 910 1.803555 GAAAGAGCAGGCTCACTTGTC 59.196 52.381 22.12 4.02 44.99 3.18
981 988 1.656652 CCAACGGATACAGAGGCAAG 58.343 55.000 0.00 0.00 0.00 4.01
1262 1269 0.603569 GCACGACAAGGAGAAGGAGA 59.396 55.000 0.00 0.00 0.00 3.71
1263 1270 1.000955 GCACGACAAGGAGAAGGAGAA 59.999 52.381 0.00 0.00 0.00 2.87
1264 1271 2.928731 GCACGACAAGGAGAAGGAGAAG 60.929 54.545 0.00 0.00 0.00 2.85
1434 1475 1.420138 CTGGACTGGTGGTTTACAGGT 59.580 52.381 0.00 0.00 39.00 4.00
1963 2223 7.297936 TCCTGTAGAACAAGACAAACTGATA 57.702 36.000 0.00 0.00 0.00 2.15
2019 2312 2.026729 CCTCTTCTTCCTTTCCCCTGTC 60.027 54.545 0.00 0.00 0.00 3.51
2083 2403 7.222611 TGAGCTATGTTTCTTTTTCTTTGCAAC 59.777 33.333 0.00 0.00 0.00 4.17
2261 2638 0.607217 TCCTCACGACCAACGCTAGA 60.607 55.000 0.00 0.00 46.94 2.43
2360 2737 2.015736 ATCTGGTCAAGCATCACGTC 57.984 50.000 0.00 0.00 0.00 4.34
2663 3049 2.995872 GCTCCAGGACGACGAGCTT 61.996 63.158 0.00 0.00 44.52 3.74
2732 3124 3.744426 GCTACAACGCCTTTTTCTACTCA 59.256 43.478 0.00 0.00 0.00 3.41
2847 3239 3.053896 GTACGGCTGTGGGGTTGC 61.054 66.667 8.92 0.00 0.00 4.17
2868 3260 2.507407 TTGTTTGATGGGAGCCTACC 57.493 50.000 0.00 0.00 0.00 3.18
3023 3415 2.223180 ACGCAAAACAAAGGACGAAGAC 60.223 45.455 0.00 0.00 0.00 3.01
3109 3597 6.765355 AGAAAAAGGGAAGAAGGTAGAAGA 57.235 37.500 0.00 0.00 0.00 2.87
3110 3598 7.150447 AGAAAAAGGGAAGAAGGTAGAAGAA 57.850 36.000 0.00 0.00 0.00 2.52
3111 3599 7.583625 AGAAAAAGGGAAGAAGGTAGAAGAAA 58.416 34.615 0.00 0.00 0.00 2.52
3112 3600 8.059461 AGAAAAAGGGAAGAAGGTAGAAGAAAA 58.941 33.333 0.00 0.00 0.00 2.29
3113 3601 7.825331 AAAAGGGAAGAAGGTAGAAGAAAAG 57.175 36.000 0.00 0.00 0.00 2.27
3114 3602 6.765355 AAGGGAAGAAGGTAGAAGAAAAGA 57.235 37.500 0.00 0.00 0.00 2.52
3115 3603 6.765355 AGGGAAGAAGGTAGAAGAAAAGAA 57.235 37.500 0.00 0.00 0.00 2.52
3116 3604 6.774673 AGGGAAGAAGGTAGAAGAAAAGAAG 58.225 40.000 0.00 0.00 0.00 2.85
3117 3605 5.941058 GGGAAGAAGGTAGAAGAAAAGAAGG 59.059 44.000 0.00 0.00 0.00 3.46
3118 3606 5.941058 GGAAGAAGGTAGAAGAAAAGAAGGG 59.059 44.000 0.00 0.00 0.00 3.95
3119 3607 5.506730 AGAAGGTAGAAGAAAAGAAGGGG 57.493 43.478 0.00 0.00 0.00 4.79
3120 3608 4.289934 AGAAGGTAGAAGAAAAGAAGGGGG 59.710 45.833 0.00 0.00 0.00 5.40
3317 3811 3.056536 TCGCATTCTTCTACAGCAACTCT 60.057 43.478 0.00 0.00 0.00 3.24
3646 4148 2.809696 TGCAGCGTCGCTATACTATGTA 59.190 45.455 21.25 3.04 36.40 2.29
3734 4249 0.615827 TCTGCTCTGCCTCCTTGCTA 60.616 55.000 0.00 0.00 0.00 3.49
3757 4272 3.504375 AGGGCTTCATCAAAAAGCTTCT 58.496 40.909 0.00 3.87 46.59 2.85
3833 4350 3.118775 ACTCCGAGCATGCTTACATTGTA 60.119 43.478 23.61 1.27 32.87 2.41
3841 4452 6.348498 AGCATGCTTACATTGTATGTCACTA 58.652 36.000 16.30 0.00 43.67 2.74
3855 4466 1.078497 CACTAGAATGGGGCGTGCA 60.078 57.895 0.00 0.00 0.00 4.57
3856 4467 1.091771 CACTAGAATGGGGCGTGCAG 61.092 60.000 0.00 0.00 0.00 4.41
3883 4494 9.838163 CATGAATTGCAATAACATTTGTATTCG 57.162 29.630 21.47 10.07 35.21 3.34
3891 4502 8.185505 GCAATAACATTTGTATTCGGGAAACTA 58.814 33.333 0.00 0.00 0.00 2.24
3897 4508 8.966868 ACATTTGTATTCGGGAAACTAAATCAT 58.033 29.630 0.00 0.00 0.00 2.45
3932 4544 7.871853 ACTTATGAAACATTTGTCACTGGTAC 58.128 34.615 0.00 0.00 0.00 3.34
3968 4580 1.403323 GCAATCCTGCTAGCTTTGTCC 59.597 52.381 17.23 0.42 45.74 4.02
4001 4613 7.390013 TGTCACTAGGTATAGTCTGGAGTAT 57.610 40.000 0.00 3.81 40.38 2.12
4011 4623 7.233757 GGTATAGTCTGGAGTATTGTGGAATCT 59.766 40.741 3.66 0.00 0.00 2.40
4018 4630 7.987458 TCTGGAGTATTGTGGAATCTTGATAAC 59.013 37.037 0.00 0.00 0.00 1.89
4019 4631 7.861629 TGGAGTATTGTGGAATCTTGATAACT 58.138 34.615 0.00 0.00 0.00 2.24
4020 4632 8.988060 TGGAGTATTGTGGAATCTTGATAACTA 58.012 33.333 0.00 0.00 0.00 2.24
4021 4633 9.482627 GGAGTATTGTGGAATCTTGATAACTAG 57.517 37.037 0.00 0.00 0.00 2.57
4028 4640 9.551734 TGTGGAATCTTGATAACTAGATCATTG 57.448 33.333 0.00 0.00 37.55 2.82
4029 4641 9.770097 GTGGAATCTTGATAACTAGATCATTGA 57.230 33.333 0.00 0.00 37.55 2.57
4033 4645 8.845413 ATCTTGATAACTAGATCATTGAAGGC 57.155 34.615 0.00 0.00 34.57 4.35
4034 4646 6.925718 TCTTGATAACTAGATCATTGAAGGCG 59.074 38.462 0.00 0.00 35.77 5.52
4035 4647 4.991056 TGATAACTAGATCATTGAAGGCGC 59.009 41.667 0.00 0.00 30.75 6.53
4036 4648 1.858091 ACTAGATCATTGAAGGCGCG 58.142 50.000 0.00 0.00 0.00 6.86
4037 4649 0.510359 CTAGATCATTGAAGGCGCGC 59.490 55.000 25.94 25.94 0.00 6.86
4038 4650 1.215014 TAGATCATTGAAGGCGCGCG 61.215 55.000 28.44 28.44 0.00 6.86
4039 4651 2.813179 GATCATTGAAGGCGCGCGT 61.813 57.895 32.35 24.51 0.00 6.01
4040 4652 2.309764 GATCATTGAAGGCGCGCGTT 62.310 55.000 35.91 35.91 0.00 4.84
4041 4653 1.087202 ATCATTGAAGGCGCGCGTTA 61.087 50.000 35.47 23.25 0.00 3.18
4042 4654 1.580132 CATTGAAGGCGCGCGTTAC 60.580 57.895 35.47 27.03 0.00 2.50
4043 4655 1.740296 ATTGAAGGCGCGCGTTACT 60.740 52.632 35.47 23.20 0.00 2.24
4044 4656 1.966493 ATTGAAGGCGCGCGTTACTG 61.966 55.000 35.47 1.79 0.00 2.74
4045 4657 4.500568 GAAGGCGCGCGTTACTGC 62.501 66.667 35.47 20.96 0.00 4.40
4054 4666 4.077184 CGTTACTGCGCCCCTCCA 62.077 66.667 4.18 0.00 0.00 3.86
4055 4667 2.590092 GTTACTGCGCCCCTCCAT 59.410 61.111 4.18 0.00 0.00 3.41
4056 4668 1.077716 GTTACTGCGCCCCTCCATT 60.078 57.895 4.18 0.00 0.00 3.16
4057 4669 0.679960 GTTACTGCGCCCCTCCATTT 60.680 55.000 4.18 0.00 0.00 2.32
4058 4670 0.039035 TTACTGCGCCCCTCCATTTT 59.961 50.000 4.18 0.00 0.00 1.82
4059 4671 0.679640 TACTGCGCCCCTCCATTTTG 60.680 55.000 4.18 0.00 0.00 2.44
4060 4672 1.678635 CTGCGCCCCTCCATTTTGA 60.679 57.895 4.18 0.00 0.00 2.69
4061 4673 1.000233 TGCGCCCCTCCATTTTGAT 60.000 52.632 4.18 0.00 0.00 2.57
4062 4674 1.321805 TGCGCCCCTCCATTTTGATG 61.322 55.000 4.18 0.00 0.00 3.07
4063 4675 1.322538 GCGCCCCTCCATTTTGATGT 61.323 55.000 0.00 0.00 0.00 3.06
4064 4676 1.185315 CGCCCCTCCATTTTGATGTT 58.815 50.000 0.00 0.00 0.00 2.71
4065 4677 2.374184 CGCCCCTCCATTTTGATGTTA 58.626 47.619 0.00 0.00 0.00 2.41
4066 4678 2.958355 CGCCCCTCCATTTTGATGTTAT 59.042 45.455 0.00 0.00 0.00 1.89
4067 4679 4.141287 CGCCCCTCCATTTTGATGTTATA 58.859 43.478 0.00 0.00 0.00 0.98
4068 4680 4.766891 CGCCCCTCCATTTTGATGTTATAT 59.233 41.667 0.00 0.00 0.00 0.86
4069 4681 5.943416 CGCCCCTCCATTTTGATGTTATATA 59.057 40.000 0.00 0.00 0.00 0.86
4070 4682 6.603201 CGCCCCTCCATTTTGATGTTATATAT 59.397 38.462 0.00 0.00 0.00 0.86
4071 4683 7.122650 CGCCCCTCCATTTTGATGTTATATATT 59.877 37.037 0.00 0.00 0.00 1.28
4072 4684 9.474313 GCCCCTCCATTTTGATGTTATATATTA 57.526 33.333 0.00 0.00 0.00 0.98
4095 4707 9.705103 ATTAGGAACCATGGAAATATATGGATG 57.295 33.333 21.47 0.00 45.32 3.51
4096 4708 7.107435 AGGAACCATGGAAATATATGGATGT 57.893 36.000 21.47 0.00 45.32 3.06
4097 4709 8.230848 AGGAACCATGGAAATATATGGATGTA 57.769 34.615 21.47 0.00 45.32 2.29
4098 4710 8.849844 AGGAACCATGGAAATATATGGATGTAT 58.150 33.333 21.47 0.00 45.32 2.29
4099 4711 9.479549 GGAACCATGGAAATATATGGATGTATT 57.520 33.333 21.47 0.00 45.32 1.89
4137 4749 7.972832 TGTCGGTAATTTTTGTAAGTGATCT 57.027 32.000 0.00 0.00 0.00 2.75
4138 4750 7.802738 TGTCGGTAATTTTTGTAAGTGATCTG 58.197 34.615 0.00 0.00 0.00 2.90
4139 4751 7.442969 TGTCGGTAATTTTTGTAAGTGATCTGT 59.557 33.333 0.00 0.00 0.00 3.41
4140 4752 7.955864 GTCGGTAATTTTTGTAAGTGATCTGTC 59.044 37.037 0.00 0.00 0.00 3.51
4141 4753 7.118680 TCGGTAATTTTTGTAAGTGATCTGTCC 59.881 37.037 0.00 0.00 0.00 4.02
4142 4754 7.535997 GGTAATTTTTGTAAGTGATCTGTCCC 58.464 38.462 0.00 0.00 0.00 4.46
4143 4755 7.175990 GGTAATTTTTGTAAGTGATCTGTCCCA 59.824 37.037 0.00 0.00 0.00 4.37
4144 4756 7.781324 AATTTTTGTAAGTGATCTGTCCCAT 57.219 32.000 0.00 0.00 0.00 4.00
4145 4757 7.781324 ATTTTTGTAAGTGATCTGTCCCATT 57.219 32.000 0.00 0.00 0.00 3.16
4146 4758 6.573664 TTTTGTAAGTGATCTGTCCCATTG 57.426 37.500 0.00 0.00 0.00 2.82
4147 4759 4.908601 TGTAAGTGATCTGTCCCATTGT 57.091 40.909 0.00 0.00 0.00 2.71
4148 4760 6.367374 TTGTAAGTGATCTGTCCCATTGTA 57.633 37.500 0.00 0.00 0.00 2.41
4149 4761 5.977635 TGTAAGTGATCTGTCCCATTGTAG 58.022 41.667 0.00 0.00 0.00 2.74
4150 4762 3.550437 AGTGATCTGTCCCATTGTAGC 57.450 47.619 0.00 0.00 0.00 3.58
4151 4763 2.171448 AGTGATCTGTCCCATTGTAGCC 59.829 50.000 0.00 0.00 0.00 3.93
4152 4764 2.171448 GTGATCTGTCCCATTGTAGCCT 59.829 50.000 0.00 0.00 0.00 4.58
4153 4765 2.171237 TGATCTGTCCCATTGTAGCCTG 59.829 50.000 0.00 0.00 0.00 4.85
4154 4766 1.951209 TCTGTCCCATTGTAGCCTGA 58.049 50.000 0.00 0.00 0.00 3.86
4155 4767 2.481441 TCTGTCCCATTGTAGCCTGAT 58.519 47.619 0.00 0.00 0.00 2.90
4156 4768 2.435805 TCTGTCCCATTGTAGCCTGATC 59.564 50.000 0.00 0.00 0.00 2.92
4157 4769 2.171237 CTGTCCCATTGTAGCCTGATCA 59.829 50.000 0.00 0.00 0.00 2.92
4158 4770 2.779430 TGTCCCATTGTAGCCTGATCAT 59.221 45.455 0.00 0.00 0.00 2.45
4159 4771 3.144506 GTCCCATTGTAGCCTGATCATG 58.855 50.000 0.00 0.00 0.00 3.07
4160 4772 2.107031 TCCCATTGTAGCCTGATCATGG 59.893 50.000 0.00 1.07 0.00 3.66
4161 4773 2.107031 CCCATTGTAGCCTGATCATGGA 59.893 50.000 13.48 0.00 0.00 3.41
4162 4774 3.435457 CCCATTGTAGCCTGATCATGGAA 60.435 47.826 13.48 1.94 0.00 3.53
4163 4775 3.819337 CCATTGTAGCCTGATCATGGAAG 59.181 47.826 13.48 0.00 0.00 3.46
4164 4776 2.627515 TGTAGCCTGATCATGGAAGC 57.372 50.000 13.48 4.96 0.00 3.86
4165 4777 1.202568 TGTAGCCTGATCATGGAAGCG 60.203 52.381 13.48 0.00 0.00 4.68
4166 4778 0.394192 TAGCCTGATCATGGAAGCGG 59.606 55.000 13.48 3.40 0.00 5.52
4167 4779 1.153086 GCCTGATCATGGAAGCGGT 60.153 57.895 13.48 0.00 0.00 5.68
4168 4780 1.442526 GCCTGATCATGGAAGCGGTG 61.443 60.000 13.48 0.00 0.00 4.94
4169 4781 1.442526 CCTGATCATGGAAGCGGTGC 61.443 60.000 0.00 0.00 0.00 5.01
4170 4782 0.745486 CTGATCATGGAAGCGGTGCA 60.745 55.000 0.00 0.00 0.00 4.57
4171 4783 0.322366 TGATCATGGAAGCGGTGCAA 60.322 50.000 0.00 0.00 0.00 4.08
4172 4784 1.027357 GATCATGGAAGCGGTGCAAT 58.973 50.000 0.00 0.00 0.00 3.56
4173 4785 1.002033 GATCATGGAAGCGGTGCAATC 60.002 52.381 0.00 0.00 0.00 2.67
4174 4786 0.035152 TCATGGAAGCGGTGCAATCT 60.035 50.000 0.00 0.00 0.00 2.40
4175 4787 1.209261 TCATGGAAGCGGTGCAATCTA 59.791 47.619 0.00 0.00 0.00 1.98
4176 4788 2.016318 CATGGAAGCGGTGCAATCTAA 58.984 47.619 0.00 0.00 0.00 2.10
4177 4789 2.418368 TGGAAGCGGTGCAATCTAAT 57.582 45.000 0.00 0.00 0.00 1.73
4178 4790 2.722094 TGGAAGCGGTGCAATCTAATT 58.278 42.857 0.00 0.00 0.00 1.40
4179 4791 3.088532 TGGAAGCGGTGCAATCTAATTT 58.911 40.909 0.00 0.00 0.00 1.82
4180 4792 3.509575 TGGAAGCGGTGCAATCTAATTTT 59.490 39.130 0.00 0.00 0.00 1.82
4181 4793 4.105486 GGAAGCGGTGCAATCTAATTTTC 58.895 43.478 0.00 0.00 0.00 2.29
4182 4794 4.380444 GGAAGCGGTGCAATCTAATTTTCA 60.380 41.667 0.00 0.00 0.00 2.69
4183 4795 4.096732 AGCGGTGCAATCTAATTTTCAC 57.903 40.909 0.00 0.00 0.00 3.18
4184 4796 3.505680 AGCGGTGCAATCTAATTTTCACA 59.494 39.130 0.00 0.00 0.00 3.58
4185 4797 4.022416 AGCGGTGCAATCTAATTTTCACAA 60.022 37.500 0.00 0.00 0.00 3.33
4186 4798 4.683781 GCGGTGCAATCTAATTTTCACAAA 59.316 37.500 0.00 0.00 0.00 2.83
4187 4799 5.348451 GCGGTGCAATCTAATTTTCACAAAT 59.652 36.000 0.00 0.00 33.72 2.32
4188 4800 6.670452 GCGGTGCAATCTAATTTTCACAAATG 60.670 38.462 0.00 0.00 32.57 2.32
4189 4801 6.585702 CGGTGCAATCTAATTTTCACAAATGA 59.414 34.615 0.00 0.00 32.57 2.57
4190 4802 7.116090 CGGTGCAATCTAATTTTCACAAATGAA 59.884 33.333 0.00 0.00 43.28 2.57
4191 4803 8.938906 GGTGCAATCTAATTTTCACAAATGAAT 58.061 29.630 0.00 0.00 44.36 2.57
4202 4814 9.965824 ATTTTCACAAATGAATAAAGACTTCGT 57.034 25.926 0.00 0.00 44.36 3.85
4203 4815 9.796120 TTTTCACAAATGAATAAAGACTTCGTT 57.204 25.926 0.00 0.00 44.36 3.85
4204 4816 9.796120 TTTCACAAATGAATAAAGACTTCGTTT 57.204 25.926 0.00 0.00 44.36 3.60
4207 4819 9.329913 CACAAATGAATAAAGACTTCGTTTAGG 57.670 33.333 3.65 0.00 38.92 2.69
4208 4820 8.021396 ACAAATGAATAAAGACTTCGTTTAGGC 58.979 33.333 3.65 0.00 38.92 3.93
4209 4821 7.923414 AATGAATAAAGACTTCGTTTAGGCT 57.077 32.000 0.00 0.00 33.99 4.58
4210 4822 7.923414 ATGAATAAAGACTTCGTTTAGGCTT 57.077 32.000 0.00 0.00 45.44 4.35
4211 4823 7.360575 TGAATAAAGACTTCGTTTAGGCTTC 57.639 36.000 0.00 0.00 42.70 3.86
4212 4824 7.159372 TGAATAAAGACTTCGTTTAGGCTTCT 58.841 34.615 0.00 0.00 42.70 2.85
4213 4825 8.308931 TGAATAAAGACTTCGTTTAGGCTTCTA 58.691 33.333 0.00 1.57 42.70 2.10
4214 4826 9.148104 GAATAAAGACTTCGTTTAGGCTTCTAA 57.852 33.333 0.00 0.00 42.70 2.10
4215 4827 9.498176 AATAAAGACTTCGTTTAGGCTTCTAAA 57.502 29.630 0.00 0.00 42.70 1.85
4216 4828 7.981102 AAAGACTTCGTTTAGGCTTCTAAAT 57.019 32.000 0.00 0.00 42.70 1.40
4218 4830 8.705048 AAGACTTCGTTTAGGCTTCTAAATAG 57.295 34.615 0.00 4.10 39.29 1.73
4219 4831 7.838884 AGACTTCGTTTAGGCTTCTAAATAGT 58.161 34.615 0.00 6.48 42.70 2.12
4220 4832 7.975058 AGACTTCGTTTAGGCTTCTAAATAGTC 59.025 37.037 18.22 18.22 42.70 2.59
4221 4833 7.040494 ACTTCGTTTAGGCTTCTAAATAGTCC 58.960 38.462 0.00 0.00 42.70 3.85
4222 4834 6.534475 TCGTTTAGGCTTCTAAATAGTCCA 57.466 37.500 0.00 0.00 42.70 4.02
4223 4835 6.335777 TCGTTTAGGCTTCTAAATAGTCCAC 58.664 40.000 0.00 0.00 42.70 4.02
4224 4836 5.522824 CGTTTAGGCTTCTAAATAGTCCACC 59.477 44.000 0.00 0.00 42.70 4.61
4225 4837 6.629739 CGTTTAGGCTTCTAAATAGTCCACCT 60.630 42.308 0.00 0.00 42.70 4.00
4226 4838 6.886178 TTAGGCTTCTAAATAGTCCACCTT 57.114 37.500 0.00 0.00 30.68 3.50
4227 4839 5.780958 AGGCTTCTAAATAGTCCACCTTT 57.219 39.130 0.00 0.00 0.00 3.11
4228 4840 6.886178 AGGCTTCTAAATAGTCCACCTTTA 57.114 37.500 0.00 0.00 0.00 1.85
4229 4841 6.651086 AGGCTTCTAAATAGTCCACCTTTAC 58.349 40.000 0.00 0.00 0.00 2.01
4230 4842 5.821470 GGCTTCTAAATAGTCCACCTTTACC 59.179 44.000 0.00 0.00 0.00 2.85
4231 4843 6.412214 GCTTCTAAATAGTCCACCTTTACCA 58.588 40.000 0.00 0.00 0.00 3.25
4232 4844 6.882678 GCTTCTAAATAGTCCACCTTTACCAA 59.117 38.462 0.00 0.00 0.00 3.67
4233 4845 7.392393 GCTTCTAAATAGTCCACCTTTACCAAA 59.608 37.037 0.00 0.00 0.00 3.28
4234 4846 9.462606 CTTCTAAATAGTCCACCTTTACCAAAT 57.537 33.333 0.00 0.00 0.00 2.32
4235 4847 8.801882 TCTAAATAGTCCACCTTTACCAAATG 57.198 34.615 0.00 0.00 0.00 2.32
4236 4848 8.607713 TCTAAATAGTCCACCTTTACCAAATGA 58.392 33.333 0.00 0.00 0.00 2.57
4237 4849 7.703058 AAATAGTCCACCTTTACCAAATGAG 57.297 36.000 0.00 0.00 0.00 2.90
4238 4850 4.724279 AGTCCACCTTTACCAAATGAGT 57.276 40.909 0.00 0.00 0.00 3.41
4239 4851 5.061721 AGTCCACCTTTACCAAATGAGTT 57.938 39.130 0.00 0.00 0.00 3.01
4240 4852 5.070685 AGTCCACCTTTACCAAATGAGTTC 58.929 41.667 0.00 0.00 0.00 3.01
4241 4853 4.825085 GTCCACCTTTACCAAATGAGTTCA 59.175 41.667 0.00 0.00 0.00 3.18
4242 4854 5.300792 GTCCACCTTTACCAAATGAGTTCAA 59.699 40.000 0.00 0.00 0.00 2.69
4243 4855 5.894393 TCCACCTTTACCAAATGAGTTCAAA 59.106 36.000 0.00 0.00 0.00 2.69
4244 4856 6.381420 TCCACCTTTACCAAATGAGTTCAAAA 59.619 34.615 0.00 0.00 0.00 2.44
4245 4857 7.044798 CCACCTTTACCAAATGAGTTCAAAAA 58.955 34.615 0.00 0.00 0.00 1.94
4246 4858 7.714813 CCACCTTTACCAAATGAGTTCAAAAAT 59.285 33.333 0.00 0.00 0.00 1.82
4247 4859 9.757227 CACCTTTACCAAATGAGTTCAAAAATA 57.243 29.630 0.00 0.00 0.00 1.40
4273 4885 7.873719 TTGTTTGAAATTAGACAGAACCAGA 57.126 32.000 0.00 0.00 0.00 3.86
4274 4886 7.259290 TGTTTGAAATTAGACAGAACCAGAC 57.741 36.000 0.00 0.00 0.00 3.51
4275 4887 6.826231 TGTTTGAAATTAGACAGAACCAGACA 59.174 34.615 0.00 0.00 0.00 3.41
4276 4888 6.861065 TTGAAATTAGACAGAACCAGACAC 57.139 37.500 0.00 0.00 0.00 3.67
4277 4889 5.305585 TGAAATTAGACAGAACCAGACACC 58.694 41.667 0.00 0.00 0.00 4.16
4278 4890 3.983044 ATTAGACAGAACCAGACACCC 57.017 47.619 0.00 0.00 0.00 4.61
4279 4891 2.696526 TAGACAGAACCAGACACCCT 57.303 50.000 0.00 0.00 0.00 4.34
4280 4892 1.051812 AGACAGAACCAGACACCCTG 58.948 55.000 0.00 0.00 42.55 4.45
4291 4903 4.993029 CAGACACCCTGGTTTAACAAAA 57.007 40.909 0.00 0.00 39.23 2.44
4292 4904 5.331876 CAGACACCCTGGTTTAACAAAAA 57.668 39.130 0.00 0.00 39.23 1.94
4293 4905 5.912892 CAGACACCCTGGTTTAACAAAAAT 58.087 37.500 0.00 0.00 39.23 1.82
4294 4906 5.752955 CAGACACCCTGGTTTAACAAAAATG 59.247 40.000 0.00 0.00 39.23 2.32
4295 4907 5.423931 AGACACCCTGGTTTAACAAAAATGT 59.576 36.000 0.00 0.00 0.00 2.71
4296 4908 6.056090 ACACCCTGGTTTAACAAAAATGTT 57.944 33.333 0.00 0.00 35.93 2.71
4297 4909 6.477253 ACACCCTGGTTTAACAAAAATGTTT 58.523 32.000 0.00 0.00 33.59 2.83
4299 4911 6.595716 CACCCTGGTTTAACAAAAATGTTTGA 59.404 34.615 15.43 0.00 45.99 2.69
4300 4912 7.281999 CACCCTGGTTTAACAAAAATGTTTGAT 59.718 33.333 15.43 5.86 45.99 2.57
4301 4913 8.487028 ACCCTGGTTTAACAAAAATGTTTGATA 58.513 29.630 15.43 4.81 45.99 2.15
4302 4914 8.769891 CCCTGGTTTAACAAAAATGTTTGATAC 58.230 33.333 15.43 6.81 45.99 2.24
4303 4915 9.319143 CCTGGTTTAACAAAAATGTTTGATACA 57.681 29.630 15.43 0.00 45.99 2.29
4318 4930 8.417780 TGTTTGATACAATTTTTCACAACAGG 57.582 30.769 0.00 0.00 32.64 4.00
4319 4931 8.037758 TGTTTGATACAATTTTTCACAACAGGT 58.962 29.630 0.00 0.00 32.64 4.00
4320 4932 8.539674 GTTTGATACAATTTTTCACAACAGGTC 58.460 33.333 0.00 0.00 0.00 3.85
4321 4933 6.744112 TGATACAATTTTTCACAACAGGTCC 58.256 36.000 0.00 0.00 0.00 4.46
4322 4934 6.322456 TGATACAATTTTTCACAACAGGTCCA 59.678 34.615 0.00 0.00 0.00 4.02
4323 4935 5.009854 ACAATTTTTCACAACAGGTCCAG 57.990 39.130 0.00 0.00 0.00 3.86
4324 4936 4.141959 ACAATTTTTCACAACAGGTCCAGG 60.142 41.667 0.00 0.00 0.00 4.45
4325 4937 2.065899 TTTTCACAACAGGTCCAGGG 57.934 50.000 0.00 0.00 0.00 4.45
4326 4938 0.184933 TTTCACAACAGGTCCAGGGG 59.815 55.000 0.00 0.00 0.00 4.79
4327 4939 0.696143 TTCACAACAGGTCCAGGGGA 60.696 55.000 0.00 0.00 0.00 4.81
4328 4940 0.696143 TCACAACAGGTCCAGGGGAA 60.696 55.000 0.00 0.00 31.38 3.97
4329 4941 0.537371 CACAACAGGTCCAGGGGAAC 60.537 60.000 0.00 0.00 40.27 3.62
4348 4960 2.119801 CCTTGTGGAGGGATGTGAAG 57.880 55.000 0.00 0.00 42.26 3.02
4349 4961 1.630369 CCTTGTGGAGGGATGTGAAGA 59.370 52.381 0.00 0.00 42.26 2.87
4350 4962 2.240667 CCTTGTGGAGGGATGTGAAGAT 59.759 50.000 0.00 0.00 42.26 2.40
4351 4963 3.539604 CTTGTGGAGGGATGTGAAGATC 58.460 50.000 0.00 0.00 0.00 2.75
4352 4964 2.837947 TGTGGAGGGATGTGAAGATCT 58.162 47.619 0.00 0.00 0.00 2.75
4353 4965 3.184628 TGTGGAGGGATGTGAAGATCTT 58.815 45.455 7.95 7.95 0.00 2.40
4354 4966 3.054875 TGTGGAGGGATGTGAAGATCTTG 60.055 47.826 14.00 0.00 0.00 3.02
4355 4967 3.198635 GTGGAGGGATGTGAAGATCTTGA 59.801 47.826 14.00 0.14 0.00 3.02
4356 4968 3.845992 TGGAGGGATGTGAAGATCTTGAA 59.154 43.478 14.00 0.00 0.00 2.69
4357 4969 4.080695 TGGAGGGATGTGAAGATCTTGAAG 60.081 45.833 14.00 0.00 0.00 3.02
4358 4970 4.450053 GAGGGATGTGAAGATCTTGAAGG 58.550 47.826 14.00 0.00 0.00 3.46
4359 4971 3.201708 AGGGATGTGAAGATCTTGAAGGG 59.798 47.826 14.00 0.00 0.00 3.95
4360 4972 3.054065 GGGATGTGAAGATCTTGAAGGGT 60.054 47.826 14.00 0.00 0.00 4.34
4361 4973 3.944015 GGATGTGAAGATCTTGAAGGGTG 59.056 47.826 14.00 0.00 0.00 4.61
4362 4974 3.423539 TGTGAAGATCTTGAAGGGTGG 57.576 47.619 14.00 0.00 0.00 4.61
4363 4975 2.087646 GTGAAGATCTTGAAGGGTGGC 58.912 52.381 14.00 0.00 0.00 5.01
4364 4976 1.988107 TGAAGATCTTGAAGGGTGGCT 59.012 47.619 14.00 0.00 0.00 4.75
4365 4977 2.026822 TGAAGATCTTGAAGGGTGGCTC 60.027 50.000 14.00 0.00 0.00 4.70
4366 4978 1.661463 AGATCTTGAAGGGTGGCTCA 58.339 50.000 0.00 0.00 0.00 4.26
4367 4979 1.988107 AGATCTTGAAGGGTGGCTCAA 59.012 47.619 0.00 0.00 0.00 3.02
4368 4980 2.087646 GATCTTGAAGGGTGGCTCAAC 58.912 52.381 0.00 0.00 0.00 3.18
4369 4981 0.250295 TCTTGAAGGGTGGCTCAACG 60.250 55.000 0.00 0.00 0.00 4.10
4370 4982 1.228124 TTGAAGGGTGGCTCAACGG 60.228 57.895 0.00 0.00 0.00 4.44
4371 4983 3.056328 GAAGGGTGGCTCAACGGC 61.056 66.667 0.00 0.00 38.97 5.68
4377 4989 3.785982 TGGCTCAACGGCAGTAGA 58.214 55.556 0.00 0.00 44.12 2.59
4378 4990 1.292223 TGGCTCAACGGCAGTAGAC 59.708 57.895 0.00 0.00 44.12 2.59
4379 4991 1.448013 GGCTCAACGGCAGTAGACC 60.448 63.158 0.00 0.00 38.25 3.85
4380 4992 1.292223 GCTCAACGGCAGTAGACCA 59.708 57.895 0.00 0.00 0.00 4.02
4381 4993 0.108138 GCTCAACGGCAGTAGACCAT 60.108 55.000 0.00 0.00 0.00 3.55
4382 4994 1.136305 GCTCAACGGCAGTAGACCATA 59.864 52.381 0.00 0.00 0.00 2.74
4383 4995 2.810650 CTCAACGGCAGTAGACCATAC 58.189 52.381 0.00 0.00 0.00 2.39
4384 4996 2.427453 CTCAACGGCAGTAGACCATACT 59.573 50.000 0.00 0.00 0.00 2.12
4385 4997 2.829720 TCAACGGCAGTAGACCATACTT 59.170 45.455 0.00 0.00 0.00 2.24
4386 4998 3.259876 TCAACGGCAGTAGACCATACTTT 59.740 43.478 0.00 0.00 0.00 2.66
4387 4999 4.463539 TCAACGGCAGTAGACCATACTTTA 59.536 41.667 0.00 0.00 0.00 1.85
4388 5000 5.128171 TCAACGGCAGTAGACCATACTTTAT 59.872 40.000 0.00 0.00 0.00 1.40
4389 5001 5.197682 ACGGCAGTAGACCATACTTTATC 57.802 43.478 0.00 0.00 0.00 1.75
4390 5002 4.038883 ACGGCAGTAGACCATACTTTATCC 59.961 45.833 0.00 0.00 0.00 2.59
4391 5003 4.038763 CGGCAGTAGACCATACTTTATCCA 59.961 45.833 0.00 0.00 0.00 3.41
4392 5004 5.542779 GGCAGTAGACCATACTTTATCCAG 58.457 45.833 0.00 0.00 0.00 3.86
4393 5005 4.991687 GCAGTAGACCATACTTTATCCAGC 59.008 45.833 0.00 0.00 0.00 4.85
4394 5006 5.221541 GCAGTAGACCATACTTTATCCAGCT 60.222 44.000 0.00 0.00 0.00 4.24
4395 5007 6.219473 CAGTAGACCATACTTTATCCAGCTG 58.781 44.000 6.78 6.78 0.00 4.24
4396 5008 6.040955 CAGTAGACCATACTTTATCCAGCTGA 59.959 42.308 17.39 1.21 0.00 4.26
4397 5009 5.957771 AGACCATACTTTATCCAGCTGAA 57.042 39.130 17.39 0.00 0.00 3.02
4398 5010 5.923204 AGACCATACTTTATCCAGCTGAAG 58.077 41.667 17.39 13.22 0.00 3.02
4399 5011 4.455606 ACCATACTTTATCCAGCTGAAGC 58.544 43.478 17.39 0.00 42.49 3.86
4410 5022 3.432517 GCTGAAGCTGTCATCGTCT 57.567 52.632 0.00 0.00 35.07 4.18
4411 5023 1.719600 GCTGAAGCTGTCATCGTCTT 58.280 50.000 0.00 0.00 35.07 3.01
4412 5024 1.658095 GCTGAAGCTGTCATCGTCTTC 59.342 52.381 0.00 0.00 35.07 2.87
4413 5025 2.266554 CTGAAGCTGTCATCGTCTTCC 58.733 52.381 0.00 0.00 35.07 3.46
4414 5026 1.895798 TGAAGCTGTCATCGTCTTCCT 59.104 47.619 0.00 0.00 35.35 3.36
4415 5027 2.094494 TGAAGCTGTCATCGTCTTCCTC 60.094 50.000 0.00 0.00 35.35 3.71
4416 5028 1.550327 AGCTGTCATCGTCTTCCTCA 58.450 50.000 0.00 0.00 0.00 3.86
4417 5029 1.895798 AGCTGTCATCGTCTTCCTCAA 59.104 47.619 0.00 0.00 0.00 3.02
4418 5030 2.499289 AGCTGTCATCGTCTTCCTCAAT 59.501 45.455 0.00 0.00 0.00 2.57
4419 5031 3.701542 AGCTGTCATCGTCTTCCTCAATA 59.298 43.478 0.00 0.00 0.00 1.90
4420 5032 4.343526 AGCTGTCATCGTCTTCCTCAATAT 59.656 41.667 0.00 0.00 0.00 1.28
4421 5033 4.683781 GCTGTCATCGTCTTCCTCAATATC 59.316 45.833 0.00 0.00 0.00 1.63
4422 5034 5.201713 TGTCATCGTCTTCCTCAATATCC 57.798 43.478 0.00 0.00 0.00 2.59
4423 5035 4.895889 TGTCATCGTCTTCCTCAATATCCT 59.104 41.667 0.00 0.00 0.00 3.24
4424 5036 5.221322 TGTCATCGTCTTCCTCAATATCCTG 60.221 44.000 0.00 0.00 0.00 3.86
4425 5037 3.735237 TCGTCTTCCTCAATATCCTGC 57.265 47.619 0.00 0.00 0.00 4.85
4426 5038 3.031013 TCGTCTTCCTCAATATCCTGCA 58.969 45.455 0.00 0.00 0.00 4.41
4427 5039 3.450817 TCGTCTTCCTCAATATCCTGCAA 59.549 43.478 0.00 0.00 0.00 4.08
4428 5040 3.806521 CGTCTTCCTCAATATCCTGCAAG 59.193 47.826 0.00 0.00 0.00 4.01
4441 5053 2.486472 CTGCAAGGTTGAGGAGACAT 57.514 50.000 0.00 0.00 0.00 3.06
4442 5054 2.082231 CTGCAAGGTTGAGGAGACATG 58.918 52.381 0.00 0.00 0.00 3.21
4443 5055 0.807496 GCAAGGTTGAGGAGACATGC 59.193 55.000 0.00 0.00 0.00 4.06
4444 5056 1.081892 CAAGGTTGAGGAGACATGCG 58.918 55.000 0.00 0.00 0.00 4.73
4445 5057 0.036010 AAGGTTGAGGAGACATGCGG 60.036 55.000 0.00 0.00 0.00 5.69
4446 5058 2.109126 GGTTGAGGAGACATGCGGC 61.109 63.158 0.00 0.00 0.00 6.53
4447 5059 1.375908 GTTGAGGAGACATGCGGCA 60.376 57.895 4.58 4.58 0.00 5.69
4448 5060 0.955428 GTTGAGGAGACATGCGGCAA 60.955 55.000 6.82 0.00 0.00 4.52
4449 5061 0.674581 TTGAGGAGACATGCGGCAAG 60.675 55.000 6.82 4.89 0.00 4.01
4450 5062 1.817099 GAGGAGACATGCGGCAAGG 60.817 63.158 6.82 4.99 0.00 3.61
4451 5063 2.244117 GAGGAGACATGCGGCAAGGA 62.244 60.000 6.82 0.00 0.00 3.36
4452 5064 1.817099 GGAGACATGCGGCAAGGAG 60.817 63.158 6.82 0.00 0.00 3.69
4453 5065 2.437359 AGACATGCGGCAAGGAGC 60.437 61.111 6.82 0.00 44.65 4.70
4454 5066 2.437359 GACATGCGGCAAGGAGCT 60.437 61.111 6.82 0.00 44.79 4.09
4455 5067 2.437359 ACATGCGGCAAGGAGCTC 60.437 61.111 6.82 4.71 44.79 4.09
4456 5068 2.437180 CATGCGGCAAGGAGCTCA 60.437 61.111 17.19 0.00 44.79 4.26
4457 5069 2.124819 ATGCGGCAAGGAGCTCAG 60.125 61.111 17.19 5.86 44.79 3.35
4460 5072 4.093291 CGGCAAGGAGCTCAGCCT 62.093 66.667 29.51 13.34 44.85 4.58
4461 5073 2.124778 GGCAAGGAGCTCAGCCTC 60.125 66.667 27.21 7.66 43.70 4.70
4462 5074 2.667418 GCAAGGAGCTCAGCCTCA 59.333 61.111 17.19 0.00 41.15 3.86
4463 5075 1.744741 GCAAGGAGCTCAGCCTCAC 60.745 63.158 17.19 0.00 41.15 3.51
4464 5076 1.078567 CAAGGAGCTCAGCCTCACC 60.079 63.158 17.19 0.00 33.76 4.02
4465 5077 1.229464 AAGGAGCTCAGCCTCACCT 60.229 57.895 17.19 0.00 33.76 4.00
4466 5078 1.551908 AAGGAGCTCAGCCTCACCTG 61.552 60.000 17.19 0.00 33.76 4.00
4467 5079 2.125188 GAGCTCAGCCTCACCTGC 60.125 66.667 9.40 0.00 32.87 4.85
4468 5080 4.079850 AGCTCAGCCTCACCTGCG 62.080 66.667 0.00 0.00 32.87 5.18
4469 5081 4.385405 GCTCAGCCTCACCTGCGT 62.385 66.667 0.00 0.00 32.87 5.24
4470 5082 2.433838 CTCAGCCTCACCTGCGTG 60.434 66.667 0.00 0.00 41.72 5.34
4471 5083 4.687215 TCAGCCTCACCTGCGTGC 62.687 66.667 0.00 0.00 40.04 5.34
4472 5084 4.694233 CAGCCTCACCTGCGTGCT 62.694 66.667 0.00 0.00 40.04 4.40
4473 5085 4.385405 AGCCTCACCTGCGTGCTC 62.385 66.667 0.00 0.00 40.04 4.26
4475 5087 4.007644 CCTCACCTGCGTGCTCCA 62.008 66.667 0.00 0.00 40.04 3.86
4476 5088 2.740055 CTCACCTGCGTGCTCCAC 60.740 66.667 0.00 0.00 40.04 4.02
4477 5089 3.231889 CTCACCTGCGTGCTCCACT 62.232 63.158 0.00 0.00 40.04 4.00
4478 5090 2.281070 CACCTGCGTGCTCCACTT 60.281 61.111 0.00 0.00 32.04 3.16
4479 5091 2.281070 ACCTGCGTGCTCCACTTG 60.281 61.111 0.00 0.00 31.34 3.16
4480 5092 3.052082 CCTGCGTGCTCCACTTGG 61.052 66.667 0.00 0.00 31.34 3.61
4481 5093 2.281070 CTGCGTGCTCCACTTGGT 60.281 61.111 0.00 0.00 36.34 3.67
4482 5094 2.280797 TGCGTGCTCCACTTGGTC 60.281 61.111 0.00 0.00 36.34 4.02
4483 5095 2.280797 GCGTGCTCCACTTGGTCA 60.281 61.111 0.00 0.00 36.34 4.02
4484 5096 1.672356 GCGTGCTCCACTTGGTCAT 60.672 57.895 0.00 0.00 36.34 3.06
4485 5097 1.639298 GCGTGCTCCACTTGGTCATC 61.639 60.000 0.00 0.00 36.34 2.92
4486 5098 0.320683 CGTGCTCCACTTGGTCATCA 60.321 55.000 0.00 0.00 36.34 3.07
4487 5099 1.676916 CGTGCTCCACTTGGTCATCAT 60.677 52.381 0.00 0.00 36.34 2.45
4488 5100 1.741706 GTGCTCCACTTGGTCATCATG 59.258 52.381 0.00 0.00 36.34 3.07
4489 5101 1.340308 TGCTCCACTTGGTCATCATGG 60.340 52.381 0.00 0.00 36.34 3.66
4490 5102 1.340405 GCTCCACTTGGTCATCATGGT 60.340 52.381 0.00 0.00 36.34 3.55
4491 5103 2.636830 CTCCACTTGGTCATCATGGTC 58.363 52.381 0.00 0.00 36.34 4.02
4492 5104 1.281867 TCCACTTGGTCATCATGGTCC 59.718 52.381 0.00 0.00 36.34 4.46
4493 5105 1.283029 CCACTTGGTCATCATGGTCCT 59.717 52.381 0.00 0.00 0.00 3.85
4494 5106 2.362736 CACTTGGTCATCATGGTCCTG 58.637 52.381 0.00 0.00 0.00 3.86
4495 5107 1.340405 ACTTGGTCATCATGGTCCTGC 60.340 52.381 0.00 0.00 0.00 4.85
4496 5108 0.697658 TTGGTCATCATGGTCCTGCA 59.302 50.000 0.00 0.00 0.00 4.41
4497 5109 0.921166 TGGTCATCATGGTCCTGCAT 59.079 50.000 0.00 0.00 0.00 3.96
4498 5110 1.285667 TGGTCATCATGGTCCTGCATT 59.714 47.619 0.00 0.00 0.00 3.56
4499 5111 1.679680 GGTCATCATGGTCCTGCATTG 59.320 52.381 0.00 0.00 0.00 2.82
4500 5112 1.679680 GTCATCATGGTCCTGCATTGG 59.320 52.381 0.00 0.00 0.00 3.16
4501 5113 1.285667 TCATCATGGTCCTGCATTGGT 59.714 47.619 0.00 0.00 0.00 3.67
4502 5114 2.104967 CATCATGGTCCTGCATTGGTT 58.895 47.619 0.00 0.00 0.00 3.67
4503 5115 3.053768 TCATCATGGTCCTGCATTGGTTA 60.054 43.478 0.00 0.00 0.00 2.85
4504 5116 3.668141 TCATGGTCCTGCATTGGTTAT 57.332 42.857 0.00 0.00 0.00 1.89
4505 5117 3.289836 TCATGGTCCTGCATTGGTTATG 58.710 45.455 0.00 0.00 37.31 1.90
4506 5118 2.142356 TGGTCCTGCATTGGTTATGG 57.858 50.000 0.00 0.00 34.66 2.74
4507 5119 1.357420 TGGTCCTGCATTGGTTATGGT 59.643 47.619 0.00 0.00 34.66 3.55
4508 5120 2.225242 TGGTCCTGCATTGGTTATGGTT 60.225 45.455 0.00 0.00 34.66 3.67
4509 5121 2.166254 GGTCCTGCATTGGTTATGGTTG 59.834 50.000 0.00 0.00 34.66 3.77
4510 5122 2.825532 GTCCTGCATTGGTTATGGTTGT 59.174 45.455 0.00 0.00 34.66 3.32
4511 5123 2.824936 TCCTGCATTGGTTATGGTTGTG 59.175 45.455 0.00 0.00 34.66 3.33
4512 5124 2.562298 CCTGCATTGGTTATGGTTGTGT 59.438 45.455 0.00 0.00 34.66 3.72
4513 5125 3.006752 CCTGCATTGGTTATGGTTGTGTT 59.993 43.478 0.00 0.00 34.66 3.32
4514 5126 4.236935 CTGCATTGGTTATGGTTGTGTTC 58.763 43.478 0.00 0.00 34.66 3.18
4515 5127 3.638627 TGCATTGGTTATGGTTGTGTTCA 59.361 39.130 0.00 0.00 34.66 3.18
4516 5128 4.282957 TGCATTGGTTATGGTTGTGTTCAT 59.717 37.500 0.00 0.00 34.66 2.57
4517 5129 4.626604 GCATTGGTTATGGTTGTGTTCATG 59.373 41.667 0.00 0.00 34.66 3.07
4518 5130 5.782047 CATTGGTTATGGTTGTGTTCATGT 58.218 37.500 0.00 0.00 0.00 3.21
4519 5131 4.844998 TGGTTATGGTTGTGTTCATGTG 57.155 40.909 0.00 0.00 0.00 3.21
4520 5132 3.571828 TGGTTATGGTTGTGTTCATGTGG 59.428 43.478 0.00 0.00 0.00 4.17
4521 5133 3.823873 GGTTATGGTTGTGTTCATGTGGA 59.176 43.478 0.00 0.00 0.00 4.02
4522 5134 4.082787 GGTTATGGTTGTGTTCATGTGGAG 60.083 45.833 0.00 0.00 0.00 3.86
4523 5135 3.507162 ATGGTTGTGTTCATGTGGAGA 57.493 42.857 0.00 0.00 0.00 3.71
4524 5136 3.507162 TGGTTGTGTTCATGTGGAGAT 57.493 42.857 0.00 0.00 0.00 2.75
4525 5137 3.831323 TGGTTGTGTTCATGTGGAGATT 58.169 40.909 0.00 0.00 0.00 2.40
4526 5138 4.979335 TGGTTGTGTTCATGTGGAGATTA 58.021 39.130 0.00 0.00 0.00 1.75
4527 5139 5.569355 TGGTTGTGTTCATGTGGAGATTAT 58.431 37.500 0.00 0.00 0.00 1.28
4528 5140 6.716284 TGGTTGTGTTCATGTGGAGATTATA 58.284 36.000 0.00 0.00 0.00 0.98
4529 5141 6.823182 TGGTTGTGTTCATGTGGAGATTATAG 59.177 38.462 0.00 0.00 0.00 1.31
4530 5142 7.047891 GGTTGTGTTCATGTGGAGATTATAGA 58.952 38.462 0.00 0.00 0.00 1.98
4531 5143 7.552687 GGTTGTGTTCATGTGGAGATTATAGAA 59.447 37.037 0.00 0.00 0.00 2.10
4532 5144 8.946085 GTTGTGTTCATGTGGAGATTATAGAAA 58.054 33.333 0.00 0.00 0.00 2.52
4533 5145 9.685276 TTGTGTTCATGTGGAGATTATAGAAAT 57.315 29.630 0.00 0.00 0.00 2.17
4562 5174 1.812235 TGCTAGTGCACAATCACCTG 58.188 50.000 21.04 0.69 45.31 4.00
4563 5175 1.347378 TGCTAGTGCACAATCACCTGA 59.653 47.619 21.04 0.00 45.31 3.86
4564 5176 2.224499 TGCTAGTGCACAATCACCTGAA 60.224 45.455 21.04 0.00 45.31 3.02
4565 5177 2.813754 GCTAGTGCACAATCACCTGAAA 59.186 45.455 21.04 0.00 37.68 2.69
4566 5178 3.253188 GCTAGTGCACAATCACCTGAAAA 59.747 43.478 21.04 0.00 37.68 2.29
4567 5179 4.082571 GCTAGTGCACAATCACCTGAAAAT 60.083 41.667 21.04 0.00 37.68 1.82
4568 5180 4.942761 AGTGCACAATCACCTGAAAATT 57.057 36.364 21.04 0.00 37.68 1.82
4569 5181 4.874970 AGTGCACAATCACCTGAAAATTC 58.125 39.130 21.04 0.00 37.68 2.17
4570 5182 3.989817 GTGCACAATCACCTGAAAATTCC 59.010 43.478 13.17 0.00 0.00 3.01
4571 5183 3.896888 TGCACAATCACCTGAAAATTCCT 59.103 39.130 0.00 0.00 0.00 3.36
4572 5184 4.344679 TGCACAATCACCTGAAAATTCCTT 59.655 37.500 0.00 0.00 0.00 3.36
4573 5185 5.538053 TGCACAATCACCTGAAAATTCCTTA 59.462 36.000 0.00 0.00 0.00 2.69
4574 5186 6.041409 TGCACAATCACCTGAAAATTCCTTAA 59.959 34.615 0.00 0.00 0.00 1.85
4575 5187 6.587608 GCACAATCACCTGAAAATTCCTTAAG 59.412 38.462 0.00 0.00 0.00 1.85
4576 5188 7.661040 CACAATCACCTGAAAATTCCTTAAGT 58.339 34.615 0.97 0.00 0.00 2.24
4577 5189 8.143835 CACAATCACCTGAAAATTCCTTAAGTT 58.856 33.333 0.97 0.00 0.00 2.66
4578 5190 8.704668 ACAATCACCTGAAAATTCCTTAAGTTT 58.295 29.630 0.97 0.00 35.71 2.66
4579 5191 9.196552 CAATCACCTGAAAATTCCTTAAGTTTC 57.803 33.333 0.97 5.65 45.42 2.78
4599 5211 8.868522 AGTTTCAATCAATAATCTCAACTGGA 57.131 30.769 0.00 0.00 0.00 3.86
4600 5212 9.300681 AGTTTCAATCAATAATCTCAACTGGAA 57.699 29.630 0.00 0.00 0.00 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
204 208 0.236711 CCAGTTTCTGTTCTGCAGCG 59.763 55.000 9.47 0.00 44.66 5.18
499 503 1.962100 ACTCGACGGTTTCTCTCCTTT 59.038 47.619 0.00 0.00 0.00 3.11
598 602 2.413310 CTGCCGTATGGGTAGGTTTT 57.587 50.000 2.41 0.00 44.18 2.43
692 699 0.552615 AGGGGAGGGGTGTTAAGCAT 60.553 55.000 0.00 0.00 0.00 3.79
794 801 4.792804 GAGGAGGTGCCAGCCTGC 62.793 72.222 7.28 3.04 45.84 4.85
892 899 1.000163 TCAACTCTCGACAAGTGAGCC 60.000 52.381 0.00 0.00 42.53 4.70
903 910 4.494035 CGATCTCTCAACTCTCAACTCTCG 60.494 50.000 0.00 0.00 0.00 4.04
942 949 2.942796 ATCGCCGTCTGCACTGGAA 61.943 57.895 0.00 0.00 41.33 3.53
1262 1269 2.610727 CGGCGTCCTTCTTCTTCTTCTT 60.611 50.000 0.00 0.00 0.00 2.52
1263 1270 1.067495 CGGCGTCCTTCTTCTTCTTCT 60.067 52.381 0.00 0.00 0.00 2.85
1264 1271 1.336980 ACGGCGTCCTTCTTCTTCTTC 60.337 52.381 6.77 0.00 0.00 2.87
1434 1475 1.642037 CGGACGAGTCGGAGTGCTTA 61.642 60.000 18.30 0.00 32.43 3.09
1905 2141 1.060698 GATTCTGACGGTAAAGTGCGC 59.939 52.381 0.00 0.00 0.00 6.09
1963 2223 1.037493 TCGTACCTGTGCTGAGTTGT 58.963 50.000 0.00 0.00 0.00 3.32
2019 2312 7.420800 AGAAAGAAAGAAACAGTGTATTGCTG 58.579 34.615 0.00 0.00 39.67 4.41
2083 2403 4.210120 GCTCCTTAGAACTGCATTCATACG 59.790 45.833 10.26 0.00 40.09 3.06
2360 2737 2.233431 GAGTATCATGGCTGCCTCTAGG 59.767 54.545 21.03 1.01 34.35 3.02
2847 3239 2.755103 GGTAGGCTCCCATCAAACAAAG 59.245 50.000 0.00 0.00 0.00 2.77
2868 3260 4.697756 TTGAGTGCTTCCCGCGGG 62.698 66.667 39.13 39.13 43.27 6.13
2882 3274 3.584406 AGATGGATGTCTTGAGGTGTTGA 59.416 43.478 0.00 0.00 0.00 3.18
3004 3396 2.372350 CGTCTTCGTCCTTTGTTTTGC 58.628 47.619 0.00 0.00 0.00 3.68
3023 3415 0.322456 TGTTGCCATCTTCCTTCCCG 60.322 55.000 0.00 0.00 0.00 5.14
3117 3605 3.090037 GCTTCTTCCTTTCTTTACCCCC 58.910 50.000 0.00 0.00 0.00 5.40
3118 3606 3.506455 GTGCTTCTTCCTTTCTTTACCCC 59.494 47.826 0.00 0.00 0.00 4.95
3119 3607 3.188667 CGTGCTTCTTCCTTTCTTTACCC 59.811 47.826 0.00 0.00 0.00 3.69
3120 3608 4.062991 TCGTGCTTCTTCCTTTCTTTACC 58.937 43.478 0.00 0.00 0.00 2.85
3121 3609 4.989168 TCTCGTGCTTCTTCCTTTCTTTAC 59.011 41.667 0.00 0.00 0.00 2.01
3122 3610 5.209818 TCTCGTGCTTCTTCCTTTCTTTA 57.790 39.130 0.00 0.00 0.00 1.85
3123 3611 4.073293 TCTCGTGCTTCTTCCTTTCTTT 57.927 40.909 0.00 0.00 0.00 2.52
3124 3612 3.753294 TCTCGTGCTTCTTCCTTTCTT 57.247 42.857 0.00 0.00 0.00 2.52
3125 3613 3.594134 CATCTCGTGCTTCTTCCTTTCT 58.406 45.455 0.00 0.00 0.00 2.52
3317 3811 8.328758 ACAACTATGGAAGACATGAAGGAAATA 58.671 33.333 0.00 0.00 40.82 1.40
3715 4225 0.615827 TAGCAAGGAGGCAGAGCAGA 60.616 55.000 0.00 0.00 35.83 4.26
3757 4272 9.191479 CAACTAGAGTAGGAATCTAAAAGGAGA 57.809 37.037 0.00 0.00 0.00 3.71
3833 4350 1.134401 CACGCCCCATTCTAGTGACAT 60.134 52.381 0.00 0.00 35.03 3.06
3841 4452 3.650298 ATGCTGCACGCCCCATTCT 62.650 57.895 3.57 0.00 38.05 2.40
3857 4468 9.838163 CGAATACAAATGTTATTGCAATTCATG 57.162 29.630 18.75 14.47 36.62 3.07
3920 4531 3.704566 ACTTCAGACTGTACCAGTGACAA 59.295 43.478 0.86 0.00 45.44 3.18
3932 4544 4.940046 AGGATTGCACAATACTTCAGACTG 59.060 41.667 2.09 0.00 38.82 3.51
4011 4623 5.466728 GCGCCTTCAATGATCTAGTTATCAA 59.533 40.000 0.00 0.00 39.25 2.57
4018 4630 0.510359 GCGCGCCTTCAATGATCTAG 59.490 55.000 23.24 0.00 0.00 2.43
4019 4631 1.215014 CGCGCGCCTTCAATGATCTA 61.215 55.000 27.72 0.00 0.00 1.98
4020 4632 2.528743 CGCGCGCCTTCAATGATCT 61.529 57.895 27.72 0.00 0.00 2.75
4021 4633 2.052766 CGCGCGCCTTCAATGATC 60.053 61.111 27.72 0.00 0.00 2.92
4022 4634 1.087202 TAACGCGCGCCTTCAATGAT 61.087 50.000 32.58 6.71 0.00 2.45
4023 4635 1.738464 TAACGCGCGCCTTCAATGA 60.738 52.632 32.58 0.00 0.00 2.57
4024 4636 1.580132 GTAACGCGCGCCTTCAATG 60.580 57.895 32.58 12.27 0.00 2.82
4025 4637 1.740296 AGTAACGCGCGCCTTCAAT 60.740 52.632 32.58 5.07 0.00 2.57
4026 4638 2.356553 AGTAACGCGCGCCTTCAA 60.357 55.556 32.58 5.93 0.00 2.69
4027 4639 3.109547 CAGTAACGCGCGCCTTCA 61.110 61.111 32.58 7.58 0.00 3.02
4028 4640 4.500568 GCAGTAACGCGCGCCTTC 62.501 66.667 32.58 17.70 0.00 3.46
4037 4649 2.869503 AATGGAGGGGCGCAGTAACG 62.870 60.000 10.83 0.00 0.00 3.18
4038 4650 0.679960 AAATGGAGGGGCGCAGTAAC 60.680 55.000 10.83 0.00 0.00 2.50
4039 4651 0.039035 AAAATGGAGGGGCGCAGTAA 59.961 50.000 10.83 0.00 0.00 2.24
4040 4652 0.679640 CAAAATGGAGGGGCGCAGTA 60.680 55.000 10.83 0.00 0.00 2.74
4041 4653 1.978617 CAAAATGGAGGGGCGCAGT 60.979 57.895 10.83 0.00 0.00 4.40
4042 4654 1.039233 ATCAAAATGGAGGGGCGCAG 61.039 55.000 10.83 0.00 0.00 5.18
4043 4655 1.000233 ATCAAAATGGAGGGGCGCA 60.000 52.632 10.83 0.00 0.00 6.09
4044 4656 1.322538 ACATCAAAATGGAGGGGCGC 61.323 55.000 0.00 0.00 37.19 6.53
4045 4657 1.185315 AACATCAAAATGGAGGGGCG 58.815 50.000 0.00 0.00 37.19 6.13
4046 4658 7.961326 ATATATAACATCAAAATGGAGGGGC 57.039 36.000 0.00 0.00 37.19 5.80
4069 4681 9.705103 CATCCATATATTTCCATGGTTCCTAAT 57.295 33.333 12.58 7.64 42.07 1.73
4070 4682 8.677871 ACATCCATATATTTCCATGGTTCCTAA 58.322 33.333 12.58 0.00 42.07 2.69
4071 4683 8.230848 ACATCCATATATTTCCATGGTTCCTA 57.769 34.615 12.58 0.23 42.07 2.94
4072 4684 7.107435 ACATCCATATATTTCCATGGTTCCT 57.893 36.000 12.58 0.00 42.07 3.36
4073 4685 9.479549 AATACATCCATATATTTCCATGGTTCC 57.520 33.333 12.58 0.00 42.07 3.62
4111 4723 9.010029 AGATCACTTACAAAAATTACCGACAAT 57.990 29.630 0.00 0.00 0.00 2.71
4112 4724 8.286800 CAGATCACTTACAAAAATTACCGACAA 58.713 33.333 0.00 0.00 0.00 3.18
4113 4725 7.442969 ACAGATCACTTACAAAAATTACCGACA 59.557 33.333 0.00 0.00 0.00 4.35
4114 4726 7.803724 ACAGATCACTTACAAAAATTACCGAC 58.196 34.615 0.00 0.00 0.00 4.79
4115 4727 7.118680 GGACAGATCACTTACAAAAATTACCGA 59.881 37.037 0.00 0.00 0.00 4.69
4116 4728 7.241376 GGACAGATCACTTACAAAAATTACCG 58.759 38.462 0.00 0.00 0.00 4.02
4117 4729 7.175990 TGGGACAGATCACTTACAAAAATTACC 59.824 37.037 0.00 0.00 0.00 2.85
4118 4730 8.106247 TGGGACAGATCACTTACAAAAATTAC 57.894 34.615 0.00 0.00 0.00 1.89
4138 4750 3.144506 CATGATCAGGCTACAATGGGAC 58.855 50.000 0.09 0.00 0.00 4.46
4139 4751 2.107031 CCATGATCAGGCTACAATGGGA 59.893 50.000 0.73 0.00 0.00 4.37
4140 4752 2.107031 TCCATGATCAGGCTACAATGGG 59.893 50.000 0.73 2.51 0.00 4.00
4141 4753 3.497103 TCCATGATCAGGCTACAATGG 57.503 47.619 0.73 1.43 0.00 3.16
4142 4754 3.252701 GCTTCCATGATCAGGCTACAATG 59.747 47.826 0.73 0.00 0.00 2.82
4143 4755 3.484407 GCTTCCATGATCAGGCTACAAT 58.516 45.455 0.73 0.00 0.00 2.71
4144 4756 2.742856 CGCTTCCATGATCAGGCTACAA 60.743 50.000 0.73 0.00 0.00 2.41
4145 4757 1.202568 CGCTTCCATGATCAGGCTACA 60.203 52.381 0.73 0.00 0.00 2.74
4146 4758 1.506493 CGCTTCCATGATCAGGCTAC 58.494 55.000 0.73 0.00 0.00 3.58
4147 4759 0.394192 CCGCTTCCATGATCAGGCTA 59.606 55.000 0.73 0.00 0.00 3.93
4148 4760 1.147824 CCGCTTCCATGATCAGGCT 59.852 57.895 0.73 0.00 0.00 4.58
4149 4761 1.153086 ACCGCTTCCATGATCAGGC 60.153 57.895 0.73 0.08 0.00 4.85
4150 4762 1.442526 GCACCGCTTCCATGATCAGG 61.443 60.000 0.09 0.00 0.00 3.86
4151 4763 0.745486 TGCACCGCTTCCATGATCAG 60.745 55.000 0.09 0.00 0.00 2.90
4152 4764 0.322366 TTGCACCGCTTCCATGATCA 60.322 50.000 0.00 0.00 0.00 2.92
4153 4765 1.002033 GATTGCACCGCTTCCATGATC 60.002 52.381 0.00 0.00 0.00 2.92
4154 4766 1.027357 GATTGCACCGCTTCCATGAT 58.973 50.000 0.00 0.00 0.00 2.45
4155 4767 0.035152 AGATTGCACCGCTTCCATGA 60.035 50.000 0.00 0.00 0.00 3.07
4156 4768 1.667236 TAGATTGCACCGCTTCCATG 58.333 50.000 0.00 0.00 0.00 3.66
4157 4769 2.418368 TTAGATTGCACCGCTTCCAT 57.582 45.000 0.00 0.00 0.00 3.41
4158 4770 2.418368 ATTAGATTGCACCGCTTCCA 57.582 45.000 0.00 0.00 0.00 3.53
4159 4771 3.782889 AAATTAGATTGCACCGCTTCC 57.217 42.857 0.00 0.00 0.00 3.46
4160 4772 4.558860 GTGAAAATTAGATTGCACCGCTTC 59.441 41.667 0.00 0.00 0.00 3.86
4161 4773 4.022416 TGTGAAAATTAGATTGCACCGCTT 60.022 37.500 0.00 0.00 31.34 4.68
4162 4774 3.505680 TGTGAAAATTAGATTGCACCGCT 59.494 39.130 0.00 0.00 31.34 5.52
4163 4775 3.832276 TGTGAAAATTAGATTGCACCGC 58.168 40.909 0.00 0.00 31.34 5.68
4164 4776 6.585702 TCATTTGTGAAAATTAGATTGCACCG 59.414 34.615 0.00 0.00 31.34 4.94
4165 4777 7.887996 TCATTTGTGAAAATTAGATTGCACC 57.112 32.000 0.00 0.00 31.34 5.01
4176 4788 9.965824 ACGAAGTCTTTATTCATTTGTGAAAAT 57.034 25.926 0.00 0.00 29.74 1.82
4177 4789 9.796120 AACGAAGTCTTTATTCATTTGTGAAAA 57.204 25.926 0.00 0.00 45.00 2.29
4178 4790 9.796120 AAACGAAGTCTTTATTCATTTGTGAAA 57.204 25.926 0.00 0.00 45.00 2.69
4181 4793 9.329913 CCTAAACGAAGTCTTTATTCATTTGTG 57.670 33.333 0.00 0.00 45.00 3.33
4182 4794 8.021396 GCCTAAACGAAGTCTTTATTCATTTGT 58.979 33.333 0.00 0.00 45.00 2.83
4183 4795 8.237267 AGCCTAAACGAAGTCTTTATTCATTTG 58.763 33.333 0.00 0.00 45.00 2.32
4184 4796 8.336801 AGCCTAAACGAAGTCTTTATTCATTT 57.663 30.769 0.00 0.00 45.00 2.32
4185 4797 7.923414 AGCCTAAACGAAGTCTTTATTCATT 57.077 32.000 0.00 0.00 45.00 2.57
4186 4798 7.824779 AGAAGCCTAAACGAAGTCTTTATTCAT 59.175 33.333 0.00 0.00 45.00 2.57
4187 4799 7.159372 AGAAGCCTAAACGAAGTCTTTATTCA 58.841 34.615 0.00 0.00 45.00 2.57
4188 4800 7.598189 AGAAGCCTAAACGAAGTCTTTATTC 57.402 36.000 0.00 0.00 45.00 1.75
4189 4801 9.498176 TTTAGAAGCCTAAACGAAGTCTTTATT 57.502 29.630 0.00 0.00 45.00 1.40
4190 4802 9.668497 ATTTAGAAGCCTAAACGAAGTCTTTAT 57.332 29.630 0.00 0.00 45.00 1.40
4192 4804 7.981102 ATTTAGAAGCCTAAACGAAGTCTTT 57.019 32.000 0.00 0.00 45.00 2.52
4193 4805 8.312564 ACTATTTAGAAGCCTAAACGAAGTCTT 58.687 33.333 0.00 0.00 45.00 3.01
4194 4806 7.838884 ACTATTTAGAAGCCTAAACGAAGTCT 58.161 34.615 0.00 0.00 45.00 3.24
4195 4807 7.222417 GGACTATTTAGAAGCCTAAACGAAGTC 59.778 40.741 17.54 17.54 45.00 3.01
4197 4809 7.010275 GTGGACTATTTAGAAGCCTAAACGAAG 59.990 40.741 0.00 0.00 44.79 3.79
4198 4810 6.815142 GTGGACTATTTAGAAGCCTAAACGAA 59.185 38.462 0.00 0.00 44.79 3.85
4199 4811 6.335777 GTGGACTATTTAGAAGCCTAAACGA 58.664 40.000 0.00 0.00 44.79 3.85
4200 4812 5.522824 GGTGGACTATTTAGAAGCCTAAACG 59.477 44.000 0.00 0.00 44.79 3.60
4201 4813 6.651086 AGGTGGACTATTTAGAAGCCTAAAC 58.349 40.000 0.00 0.00 44.79 2.01
4202 4814 6.886178 AGGTGGACTATTTAGAAGCCTAAA 57.114 37.500 0.00 0.00 45.69 1.85
4203 4815 6.886178 AAGGTGGACTATTTAGAAGCCTAA 57.114 37.500 0.00 0.00 33.32 2.69
4204 4816 6.886178 AAAGGTGGACTATTTAGAAGCCTA 57.114 37.500 0.00 0.00 0.00 3.93
4205 4817 5.780958 AAAGGTGGACTATTTAGAAGCCT 57.219 39.130 0.00 0.00 0.00 4.58
4206 4818 5.821470 GGTAAAGGTGGACTATTTAGAAGCC 59.179 44.000 0.00 0.00 0.00 4.35
4207 4819 6.412214 TGGTAAAGGTGGACTATTTAGAAGC 58.588 40.000 0.00 0.00 0.00 3.86
4208 4820 8.857694 TTTGGTAAAGGTGGACTATTTAGAAG 57.142 34.615 0.00 0.00 0.00 2.85
4209 4821 9.238368 CATTTGGTAAAGGTGGACTATTTAGAA 57.762 33.333 0.00 0.00 0.00 2.10
4210 4822 8.607713 TCATTTGGTAAAGGTGGACTATTTAGA 58.392 33.333 0.00 0.00 0.00 2.10
4211 4823 8.801882 TCATTTGGTAAAGGTGGACTATTTAG 57.198 34.615 0.00 0.00 0.00 1.85
4212 4824 8.387813 ACTCATTTGGTAAAGGTGGACTATTTA 58.612 33.333 0.00 0.00 0.00 1.40
4213 4825 7.238710 ACTCATTTGGTAAAGGTGGACTATTT 58.761 34.615 0.00 0.00 0.00 1.40
4214 4826 6.790319 ACTCATTTGGTAAAGGTGGACTATT 58.210 36.000 0.00 0.00 0.00 1.73
4215 4827 6.388619 ACTCATTTGGTAAAGGTGGACTAT 57.611 37.500 0.00 0.00 0.00 2.12
4216 4828 5.836024 ACTCATTTGGTAAAGGTGGACTA 57.164 39.130 0.00 0.00 0.00 2.59
4217 4829 4.724279 ACTCATTTGGTAAAGGTGGACT 57.276 40.909 0.00 0.00 0.00 3.85
4218 4830 4.825085 TGAACTCATTTGGTAAAGGTGGAC 59.175 41.667 0.00 0.00 0.00 4.02
4219 4831 5.055265 TGAACTCATTTGGTAAAGGTGGA 57.945 39.130 0.00 0.00 0.00 4.02
4220 4832 5.782893 TTGAACTCATTTGGTAAAGGTGG 57.217 39.130 0.00 0.00 0.00 4.61
4221 4833 8.661352 ATTTTTGAACTCATTTGGTAAAGGTG 57.339 30.769 0.00 0.00 0.00 4.00
4247 4859 8.912988 TCTGGTTCTGTCTAATTTCAAACAAAT 58.087 29.630 0.00 0.00 0.00 2.32
4248 4860 8.188139 GTCTGGTTCTGTCTAATTTCAAACAAA 58.812 33.333 0.00 0.00 0.00 2.83
4249 4861 7.338196 TGTCTGGTTCTGTCTAATTTCAAACAA 59.662 33.333 0.00 0.00 0.00 2.83
4250 4862 6.826231 TGTCTGGTTCTGTCTAATTTCAAACA 59.174 34.615 0.00 0.00 0.00 2.83
4251 4863 7.132863 GTGTCTGGTTCTGTCTAATTTCAAAC 58.867 38.462 0.00 0.00 0.00 2.93
4252 4864 6.262273 GGTGTCTGGTTCTGTCTAATTTCAAA 59.738 38.462 0.00 0.00 0.00 2.69
4253 4865 5.763204 GGTGTCTGGTTCTGTCTAATTTCAA 59.237 40.000 0.00 0.00 0.00 2.69
4254 4866 5.305585 GGTGTCTGGTTCTGTCTAATTTCA 58.694 41.667 0.00 0.00 0.00 2.69
4255 4867 4.695928 GGGTGTCTGGTTCTGTCTAATTTC 59.304 45.833 0.00 0.00 0.00 2.17
4256 4868 4.351111 AGGGTGTCTGGTTCTGTCTAATTT 59.649 41.667 0.00 0.00 0.00 1.82
4257 4869 3.910627 AGGGTGTCTGGTTCTGTCTAATT 59.089 43.478 0.00 0.00 0.00 1.40
4258 4870 3.261897 CAGGGTGTCTGGTTCTGTCTAAT 59.738 47.826 0.00 0.00 39.76 1.73
4259 4871 2.632996 CAGGGTGTCTGGTTCTGTCTAA 59.367 50.000 0.00 0.00 39.76 2.10
4260 4872 2.248248 CAGGGTGTCTGGTTCTGTCTA 58.752 52.381 0.00 0.00 39.76 2.59
4261 4873 1.051812 CAGGGTGTCTGGTTCTGTCT 58.948 55.000 0.00 0.00 39.76 3.41
4262 4874 3.614399 CAGGGTGTCTGGTTCTGTC 57.386 57.895 0.00 0.00 39.76 3.51
4270 4882 4.993029 TTTTGTTAAACCAGGGTGTCTG 57.007 40.909 0.00 0.00 43.00 3.51
4271 4883 5.423931 ACATTTTTGTTAAACCAGGGTGTCT 59.576 36.000 0.00 0.00 0.00 3.41
4272 4884 5.666462 ACATTTTTGTTAAACCAGGGTGTC 58.334 37.500 0.00 0.00 0.00 3.67
4273 4885 5.685520 ACATTTTTGTTAAACCAGGGTGT 57.314 34.783 0.00 0.00 0.00 4.16
4274 4886 6.595716 TCAAACATTTTTGTTAAACCAGGGTG 59.404 34.615 4.35 0.00 42.51 4.61
4275 4887 6.712276 TCAAACATTTTTGTTAAACCAGGGT 58.288 32.000 4.35 0.00 42.51 4.34
4276 4888 7.800155 ATCAAACATTTTTGTTAAACCAGGG 57.200 32.000 4.35 0.00 42.51 4.45
4277 4889 9.319143 TGTATCAAACATTTTTGTTAAACCAGG 57.681 29.630 4.35 0.00 42.51 4.45
4292 4904 9.044150 CCTGTTGTGAAAAATTGTATCAAACAT 57.956 29.630 11.66 0.00 38.10 2.71
4293 4905 8.037758 ACCTGTTGTGAAAAATTGTATCAAACA 58.962 29.630 0.00 0.00 35.88 2.83
4294 4906 8.419076 ACCTGTTGTGAAAAATTGTATCAAAC 57.581 30.769 0.00 0.00 0.00 2.93
4295 4907 7.708752 GGACCTGTTGTGAAAAATTGTATCAAA 59.291 33.333 0.00 0.00 0.00 2.69
4296 4908 7.147828 TGGACCTGTTGTGAAAAATTGTATCAA 60.148 33.333 0.00 0.00 0.00 2.57
4297 4909 6.322456 TGGACCTGTTGTGAAAAATTGTATCA 59.678 34.615 0.00 0.00 0.00 2.15
4298 4910 6.744112 TGGACCTGTTGTGAAAAATTGTATC 58.256 36.000 0.00 0.00 0.00 2.24
4299 4911 6.239289 CCTGGACCTGTTGTGAAAAATTGTAT 60.239 38.462 0.00 0.00 0.00 2.29
4300 4912 5.068460 CCTGGACCTGTTGTGAAAAATTGTA 59.932 40.000 0.00 0.00 0.00 2.41
4301 4913 4.141959 CCTGGACCTGTTGTGAAAAATTGT 60.142 41.667 0.00 0.00 0.00 2.71
4302 4914 4.370917 CCTGGACCTGTTGTGAAAAATTG 58.629 43.478 0.00 0.00 0.00 2.32
4303 4915 3.387699 CCCTGGACCTGTTGTGAAAAATT 59.612 43.478 0.00 0.00 0.00 1.82
4304 4916 2.965147 CCCTGGACCTGTTGTGAAAAAT 59.035 45.455 0.00 0.00 0.00 1.82
4305 4917 2.383855 CCCTGGACCTGTTGTGAAAAA 58.616 47.619 0.00 0.00 0.00 1.94
4306 4918 1.410932 CCCCTGGACCTGTTGTGAAAA 60.411 52.381 0.00 0.00 0.00 2.29
4307 4919 0.184933 CCCCTGGACCTGTTGTGAAA 59.815 55.000 0.00 0.00 0.00 2.69
4308 4920 0.696143 TCCCCTGGACCTGTTGTGAA 60.696 55.000 0.00 0.00 0.00 3.18
4309 4921 0.696143 TTCCCCTGGACCTGTTGTGA 60.696 55.000 0.00 0.00 0.00 3.58
4310 4922 0.537371 GTTCCCCTGGACCTGTTGTG 60.537 60.000 0.00 0.00 0.00 3.33
4311 4923 1.716028 GGTTCCCCTGGACCTGTTGT 61.716 60.000 0.00 0.00 0.00 3.32
4312 4924 1.074951 GGTTCCCCTGGACCTGTTG 59.925 63.158 0.00 0.00 0.00 3.33
4313 4925 0.701310 AAGGTTCCCCTGGACCTGTT 60.701 55.000 6.35 0.00 41.56 3.16
4314 4926 1.072930 AAGGTTCCCCTGGACCTGT 60.073 57.895 6.35 0.00 41.56 4.00
4315 4927 1.380302 CAAGGTTCCCCTGGACCTG 59.620 63.158 6.35 0.00 41.56 4.00
4316 4928 1.072930 ACAAGGTTCCCCTGGACCT 60.073 57.895 0.00 0.00 41.56 3.85
4317 4929 1.074951 CACAAGGTTCCCCTGGACC 59.925 63.158 0.00 0.00 41.56 4.46
4318 4930 1.074951 CCACAAGGTTCCCCTGGAC 59.925 63.158 0.00 0.00 41.56 4.02
4319 4931 1.073319 TCCACAAGGTTCCCCTGGA 60.073 57.895 0.00 0.00 41.56 3.86
4320 4932 1.380302 CTCCACAAGGTTCCCCTGG 59.620 63.158 0.00 0.00 41.56 4.45
4321 4933 1.380302 CCTCCACAAGGTTCCCCTG 59.620 63.158 0.00 0.00 41.56 4.45
4322 4934 1.852626 CCCTCCACAAGGTTCCCCT 60.853 63.158 0.00 0.00 44.56 4.79
4323 4935 1.214992 ATCCCTCCACAAGGTTCCCC 61.215 60.000 0.00 0.00 44.56 4.81
4324 4936 0.034089 CATCCCTCCACAAGGTTCCC 60.034 60.000 0.00 0.00 44.56 3.97
4325 4937 0.698818 ACATCCCTCCACAAGGTTCC 59.301 55.000 0.00 0.00 44.56 3.62
4326 4938 1.351017 TCACATCCCTCCACAAGGTTC 59.649 52.381 0.00 0.00 44.56 3.62
4327 4939 1.444933 TCACATCCCTCCACAAGGTT 58.555 50.000 0.00 0.00 44.56 3.50
4328 4940 1.352352 CTTCACATCCCTCCACAAGGT 59.648 52.381 0.00 0.00 44.56 3.50
4329 4941 1.630369 TCTTCACATCCCTCCACAAGG 59.370 52.381 0.00 0.00 45.77 3.61
4330 4942 3.199508 AGATCTTCACATCCCTCCACAAG 59.800 47.826 0.00 0.00 0.00 3.16
4331 4943 3.184628 AGATCTTCACATCCCTCCACAA 58.815 45.455 0.00 0.00 0.00 3.33
4332 4944 2.837947 AGATCTTCACATCCCTCCACA 58.162 47.619 0.00 0.00 0.00 4.17
4333 4945 3.198635 TCAAGATCTTCACATCCCTCCAC 59.801 47.826 4.57 0.00 0.00 4.02
4334 4946 3.453868 TCAAGATCTTCACATCCCTCCA 58.546 45.455 4.57 0.00 0.00 3.86
4335 4947 4.450053 CTTCAAGATCTTCACATCCCTCC 58.550 47.826 4.57 0.00 0.00 4.30
4336 4948 4.450053 CCTTCAAGATCTTCACATCCCTC 58.550 47.826 4.57 0.00 0.00 4.30
4337 4949 3.201708 CCCTTCAAGATCTTCACATCCCT 59.798 47.826 4.57 0.00 0.00 4.20
4338 4950 3.054065 ACCCTTCAAGATCTTCACATCCC 60.054 47.826 4.57 0.00 0.00 3.85
4339 4951 3.944015 CACCCTTCAAGATCTTCACATCC 59.056 47.826 4.57 0.00 0.00 3.51
4340 4952 3.944015 CCACCCTTCAAGATCTTCACATC 59.056 47.826 4.57 0.00 0.00 3.06
4341 4953 3.875369 GCCACCCTTCAAGATCTTCACAT 60.875 47.826 4.57 0.00 0.00 3.21
4342 4954 2.553028 GCCACCCTTCAAGATCTTCACA 60.553 50.000 4.57 0.00 0.00 3.58
4343 4955 2.087646 GCCACCCTTCAAGATCTTCAC 58.912 52.381 4.57 0.00 0.00 3.18
4344 4956 1.988107 AGCCACCCTTCAAGATCTTCA 59.012 47.619 4.57 0.00 0.00 3.02
4345 4957 2.026822 TGAGCCACCCTTCAAGATCTTC 60.027 50.000 4.57 0.00 0.00 2.87
4346 4958 1.988107 TGAGCCACCCTTCAAGATCTT 59.012 47.619 0.88 0.88 0.00 2.40
4347 4959 1.661463 TGAGCCACCCTTCAAGATCT 58.339 50.000 0.00 0.00 0.00 2.75
4348 4960 2.087646 GTTGAGCCACCCTTCAAGATC 58.912 52.381 0.00 0.00 0.00 2.75
4349 4961 1.611673 CGTTGAGCCACCCTTCAAGAT 60.612 52.381 0.00 0.00 0.00 2.40
4350 4962 0.250295 CGTTGAGCCACCCTTCAAGA 60.250 55.000 0.00 0.00 0.00 3.02
4351 4963 1.237285 CCGTTGAGCCACCCTTCAAG 61.237 60.000 0.00 0.00 0.00 3.02
4352 4964 1.228124 CCGTTGAGCCACCCTTCAA 60.228 57.895 0.00 0.00 0.00 2.69
4353 4965 2.429930 CCGTTGAGCCACCCTTCA 59.570 61.111 0.00 0.00 0.00 3.02
4354 4966 3.056328 GCCGTTGAGCCACCCTTC 61.056 66.667 0.00 0.00 0.00 3.46
4355 4967 3.850098 CTGCCGTTGAGCCACCCTT 62.850 63.158 0.00 0.00 0.00 3.95
4356 4968 4.335647 CTGCCGTTGAGCCACCCT 62.336 66.667 0.00 0.00 0.00 4.34
4357 4969 3.248446 TACTGCCGTTGAGCCACCC 62.248 63.158 0.00 0.00 0.00 4.61
4358 4970 1.741770 CTACTGCCGTTGAGCCACC 60.742 63.158 0.00 0.00 0.00 4.61
4359 4971 1.014564 GTCTACTGCCGTTGAGCCAC 61.015 60.000 0.00 0.00 0.00 5.01
4360 4972 1.292223 GTCTACTGCCGTTGAGCCA 59.708 57.895 0.00 0.00 0.00 4.75
4361 4973 1.448013 GGTCTACTGCCGTTGAGCC 60.448 63.158 9.96 3.92 37.40 4.70
4362 4974 0.108138 ATGGTCTACTGCCGTTGAGC 60.108 55.000 13.25 13.25 41.56 4.26
4363 4975 2.427453 AGTATGGTCTACTGCCGTTGAG 59.573 50.000 0.00 0.00 0.00 3.02
4364 4976 2.453521 AGTATGGTCTACTGCCGTTGA 58.546 47.619 0.00 0.00 0.00 3.18
4365 4977 2.961526 AGTATGGTCTACTGCCGTTG 57.038 50.000 0.00 0.00 0.00 4.10
4366 4978 3.975168 AAAGTATGGTCTACTGCCGTT 57.025 42.857 0.00 0.00 0.00 4.44
4367 4979 4.038883 GGATAAAGTATGGTCTACTGCCGT 59.961 45.833 0.00 0.00 0.00 5.68
4368 4980 4.038763 TGGATAAAGTATGGTCTACTGCCG 59.961 45.833 0.00 0.00 0.00 5.69
4369 4981 5.542779 CTGGATAAAGTATGGTCTACTGCC 58.457 45.833 0.00 0.00 0.00 4.85
4370 4982 4.991687 GCTGGATAAAGTATGGTCTACTGC 59.008 45.833 0.00 0.00 0.00 4.40
4371 4983 6.040955 TCAGCTGGATAAAGTATGGTCTACTG 59.959 42.308 15.13 0.00 0.00 2.74
4372 4984 6.136857 TCAGCTGGATAAAGTATGGTCTACT 58.863 40.000 15.13 0.00 0.00 2.57
4373 4985 6.406692 TCAGCTGGATAAAGTATGGTCTAC 57.593 41.667 15.13 0.00 0.00 2.59
4374 4986 6.463049 GCTTCAGCTGGATAAAGTATGGTCTA 60.463 42.308 15.13 0.00 38.21 2.59
4375 4987 5.686124 GCTTCAGCTGGATAAAGTATGGTCT 60.686 44.000 15.13 0.00 38.21 3.85
4376 4988 4.513318 GCTTCAGCTGGATAAAGTATGGTC 59.487 45.833 15.13 0.00 38.21 4.02
4377 4989 4.455606 GCTTCAGCTGGATAAAGTATGGT 58.544 43.478 15.13 0.00 38.21 3.55
4392 5004 1.658095 GAAGACGATGACAGCTTCAGC 59.342 52.381 0.00 4.66 37.77 4.26
4393 5005 2.094286 AGGAAGACGATGACAGCTTCAG 60.094 50.000 0.00 0.00 37.77 3.02
4394 5006 1.895798 AGGAAGACGATGACAGCTTCA 59.104 47.619 0.00 1.85 38.72 3.02
4395 5007 2.094494 TGAGGAAGACGATGACAGCTTC 60.094 50.000 0.00 0.00 36.81 3.86
4396 5008 1.895798 TGAGGAAGACGATGACAGCTT 59.104 47.619 0.00 0.00 0.00 3.74
4397 5009 1.550327 TGAGGAAGACGATGACAGCT 58.450 50.000 0.00 0.00 0.00 4.24
4398 5010 2.370281 TTGAGGAAGACGATGACAGC 57.630 50.000 0.00 0.00 0.00 4.40
4399 5011 5.010516 AGGATATTGAGGAAGACGATGACAG 59.989 44.000 0.00 0.00 0.00 3.51
4400 5012 4.895889 AGGATATTGAGGAAGACGATGACA 59.104 41.667 0.00 0.00 0.00 3.58
4401 5013 5.226396 CAGGATATTGAGGAAGACGATGAC 58.774 45.833 0.00 0.00 0.00 3.06
4402 5014 4.262207 GCAGGATATTGAGGAAGACGATGA 60.262 45.833 0.00 0.00 0.00 2.92
4403 5015 3.993081 GCAGGATATTGAGGAAGACGATG 59.007 47.826 0.00 0.00 0.00 3.84
4404 5016 3.643320 TGCAGGATATTGAGGAAGACGAT 59.357 43.478 0.00 0.00 0.00 3.73
4405 5017 3.031013 TGCAGGATATTGAGGAAGACGA 58.969 45.455 0.00 0.00 0.00 4.20
4406 5018 3.459232 TGCAGGATATTGAGGAAGACG 57.541 47.619 0.00 0.00 0.00 4.18
4407 5019 4.133078 CCTTGCAGGATATTGAGGAAGAC 58.867 47.826 0.00 0.00 37.67 3.01
4408 5020 3.782523 ACCTTGCAGGATATTGAGGAAGA 59.217 43.478 8.91 0.00 37.67 2.87
4409 5021 4.162040 ACCTTGCAGGATATTGAGGAAG 57.838 45.455 8.91 0.00 37.67 3.46
4410 5022 4.018506 TCAACCTTGCAGGATATTGAGGAA 60.019 41.667 8.91 0.00 37.67 3.36
4411 5023 3.523157 TCAACCTTGCAGGATATTGAGGA 59.477 43.478 8.91 0.00 37.67 3.71
4412 5024 3.881688 CTCAACCTTGCAGGATATTGAGG 59.118 47.826 20.26 10.97 39.99 3.86
4413 5025 3.881688 CCTCAACCTTGCAGGATATTGAG 59.118 47.826 20.71 20.71 41.75 3.02
4414 5026 3.523157 TCCTCAACCTTGCAGGATATTGA 59.477 43.478 8.91 8.91 37.67 2.57
4415 5027 3.881688 CTCCTCAACCTTGCAGGATATTG 59.118 47.826 8.91 5.41 37.67 1.90
4416 5028 3.782523 TCTCCTCAACCTTGCAGGATATT 59.217 43.478 8.91 0.00 37.67 1.28
4417 5029 3.135530 GTCTCCTCAACCTTGCAGGATAT 59.864 47.826 8.91 0.00 37.67 1.63
4418 5030 2.501723 GTCTCCTCAACCTTGCAGGATA 59.498 50.000 8.91 0.00 37.67 2.59
4419 5031 1.280421 GTCTCCTCAACCTTGCAGGAT 59.720 52.381 8.91 0.00 37.67 3.24
4420 5032 0.687354 GTCTCCTCAACCTTGCAGGA 59.313 55.000 8.91 0.00 37.67 3.86
4421 5033 0.397941 TGTCTCCTCAACCTTGCAGG 59.602 55.000 1.16 1.16 42.49 4.85
4422 5034 2.082231 CATGTCTCCTCAACCTTGCAG 58.918 52.381 0.00 0.00 0.00 4.41
4423 5035 1.883638 GCATGTCTCCTCAACCTTGCA 60.884 52.381 0.00 0.00 0.00 4.08
4424 5036 0.807496 GCATGTCTCCTCAACCTTGC 59.193 55.000 0.00 0.00 0.00 4.01
4425 5037 1.081892 CGCATGTCTCCTCAACCTTG 58.918 55.000 0.00 0.00 0.00 3.61
4426 5038 0.036010 CCGCATGTCTCCTCAACCTT 60.036 55.000 0.00 0.00 0.00 3.50
4427 5039 1.599047 CCGCATGTCTCCTCAACCT 59.401 57.895 0.00 0.00 0.00 3.50
4428 5040 2.109126 GCCGCATGTCTCCTCAACC 61.109 63.158 0.00 0.00 0.00 3.77
4429 5041 0.955428 TTGCCGCATGTCTCCTCAAC 60.955 55.000 0.00 0.00 0.00 3.18
4430 5042 0.674581 CTTGCCGCATGTCTCCTCAA 60.675 55.000 0.00 0.00 0.00 3.02
4431 5043 1.078918 CTTGCCGCATGTCTCCTCA 60.079 57.895 0.00 0.00 0.00 3.86
4432 5044 1.817099 CCTTGCCGCATGTCTCCTC 60.817 63.158 0.00 0.00 0.00 3.71
4433 5045 2.249413 CTCCTTGCCGCATGTCTCCT 62.249 60.000 0.00 0.00 0.00 3.69
4434 5046 1.817099 CTCCTTGCCGCATGTCTCC 60.817 63.158 0.00 0.00 0.00 3.71
4435 5047 2.467826 GCTCCTTGCCGCATGTCTC 61.468 63.158 0.00 0.00 35.15 3.36
4436 5048 2.437359 GCTCCTTGCCGCATGTCT 60.437 61.111 0.00 0.00 35.15 3.41
4437 5049 2.437359 AGCTCCTTGCCGCATGTC 60.437 61.111 0.00 0.00 44.23 3.06
4438 5050 2.437359 GAGCTCCTTGCCGCATGT 60.437 61.111 0.87 0.00 44.23 3.21
4439 5051 2.437180 TGAGCTCCTTGCCGCATG 60.437 61.111 12.15 0.00 44.23 4.06
4440 5052 2.124819 CTGAGCTCCTTGCCGCAT 60.125 61.111 12.15 0.00 44.23 4.73
4444 5056 2.124778 GAGGCTGAGCTCCTTGCC 60.125 66.667 25.59 25.59 44.23 4.52
4445 5057 1.744741 GTGAGGCTGAGCTCCTTGC 60.745 63.158 12.15 12.67 43.29 4.01
4446 5058 1.078567 GGTGAGGCTGAGCTCCTTG 60.079 63.158 12.15 2.59 33.24 3.61
4447 5059 1.229464 AGGTGAGGCTGAGCTCCTT 60.229 57.895 12.15 0.00 33.24 3.36
4448 5060 1.988956 CAGGTGAGGCTGAGCTCCT 60.989 63.158 12.15 0.68 36.46 3.69
4449 5061 2.583520 CAGGTGAGGCTGAGCTCC 59.416 66.667 12.15 0.00 0.00 4.70
4450 5062 2.125188 GCAGGTGAGGCTGAGCTC 60.125 66.667 6.82 6.82 0.00 4.09
4451 5063 4.079850 CGCAGGTGAGGCTGAGCT 62.080 66.667 3.72 0.00 0.00 4.09
4452 5064 4.385405 ACGCAGGTGAGGCTGAGC 62.385 66.667 0.00 0.00 0.00 4.26
4462 5074 2.281070 CAAGTGGAGCACGCAGGT 60.281 61.111 0.00 0.00 39.64 4.00
4463 5075 3.052082 CCAAGTGGAGCACGCAGG 61.052 66.667 0.00 0.00 39.64 4.85
4464 5076 2.281070 ACCAAGTGGAGCACGCAG 60.281 61.111 3.83 0.00 39.64 5.18
4465 5077 2.280797 GACCAAGTGGAGCACGCA 60.281 61.111 3.83 0.00 39.64 5.24
4466 5078 1.639298 GATGACCAAGTGGAGCACGC 61.639 60.000 3.83 0.00 39.64 5.34
4467 5079 0.320683 TGATGACCAAGTGGAGCACG 60.321 55.000 3.83 0.00 39.64 5.34
4468 5080 1.741706 CATGATGACCAAGTGGAGCAC 59.258 52.381 3.83 0.00 38.94 4.40
4469 5081 1.340308 CCATGATGACCAAGTGGAGCA 60.340 52.381 3.83 2.33 38.94 4.26
4470 5082 1.340405 ACCATGATGACCAAGTGGAGC 60.340 52.381 3.83 0.00 38.94 4.70
4471 5083 2.636830 GACCATGATGACCAAGTGGAG 58.363 52.381 3.83 0.00 38.94 3.86
4472 5084 1.281867 GGACCATGATGACCAAGTGGA 59.718 52.381 3.83 0.00 38.94 4.02
4473 5085 1.283029 AGGACCATGATGACCAAGTGG 59.717 52.381 10.20 0.00 42.17 4.00
4474 5086 2.362736 CAGGACCATGATGACCAAGTG 58.637 52.381 10.20 0.00 0.00 3.16
4475 5087 1.340405 GCAGGACCATGATGACCAAGT 60.340 52.381 10.20 0.00 0.00 3.16
4476 5088 1.340308 TGCAGGACCATGATGACCAAG 60.340 52.381 10.20 4.82 0.00 3.61
4477 5089 0.697658 TGCAGGACCATGATGACCAA 59.302 50.000 10.20 0.00 0.00 3.67
4478 5090 0.921166 ATGCAGGACCATGATGACCA 59.079 50.000 10.20 0.00 0.00 4.02
4479 5091 1.679680 CAATGCAGGACCATGATGACC 59.320 52.381 0.00 0.00 0.00 4.02
4480 5092 1.679680 CCAATGCAGGACCATGATGAC 59.320 52.381 0.00 0.00 0.00 3.06
4481 5093 1.285667 ACCAATGCAGGACCATGATGA 59.714 47.619 0.00 0.00 0.00 2.92
4482 5094 1.771565 ACCAATGCAGGACCATGATG 58.228 50.000 0.00 0.00 0.00 3.07
4483 5095 2.537633 AACCAATGCAGGACCATGAT 57.462 45.000 0.00 0.00 0.00 2.45
4484 5096 3.289836 CATAACCAATGCAGGACCATGA 58.710 45.455 0.00 0.00 0.00 3.07
4485 5097 2.363038 CCATAACCAATGCAGGACCATG 59.637 50.000 0.00 0.00 33.92 3.66
4486 5098 2.024080 ACCATAACCAATGCAGGACCAT 60.024 45.455 0.00 0.00 33.92 3.55
4487 5099 1.357420 ACCATAACCAATGCAGGACCA 59.643 47.619 0.00 0.00 33.92 4.02
4488 5100 2.143876 ACCATAACCAATGCAGGACC 57.856 50.000 0.00 0.00 33.92 4.46
4489 5101 2.825532 ACAACCATAACCAATGCAGGAC 59.174 45.455 0.00 0.00 33.92 3.85
4490 5102 2.824936 CACAACCATAACCAATGCAGGA 59.175 45.455 0.00 0.00 33.92 3.86
4491 5103 2.562298 ACACAACCATAACCAATGCAGG 59.438 45.455 0.00 0.00 33.92 4.85
4492 5104 3.940209 ACACAACCATAACCAATGCAG 57.060 42.857 0.00 0.00 33.92 4.41
4493 5105 3.638627 TGAACACAACCATAACCAATGCA 59.361 39.130 0.00 0.00 33.92 3.96
4494 5106 4.250116 TGAACACAACCATAACCAATGC 57.750 40.909 0.00 0.00 33.92 3.56
4495 5107 5.634439 CACATGAACACAACCATAACCAATG 59.366 40.000 0.00 0.00 35.15 2.82
4496 5108 5.279406 CCACATGAACACAACCATAACCAAT 60.279 40.000 0.00 0.00 0.00 3.16
4497 5109 4.038522 CCACATGAACACAACCATAACCAA 59.961 41.667 0.00 0.00 0.00 3.67
4498 5110 3.571828 CCACATGAACACAACCATAACCA 59.428 43.478 0.00 0.00 0.00 3.67
4499 5111 3.823873 TCCACATGAACACAACCATAACC 59.176 43.478 0.00 0.00 0.00 2.85
4500 5112 4.759693 TCTCCACATGAACACAACCATAAC 59.240 41.667 0.00 0.00 0.00 1.89
4501 5113 4.979335 TCTCCACATGAACACAACCATAA 58.021 39.130 0.00 0.00 0.00 1.90
4502 5114 4.632327 TCTCCACATGAACACAACCATA 57.368 40.909 0.00 0.00 0.00 2.74
4503 5115 3.507162 TCTCCACATGAACACAACCAT 57.493 42.857 0.00 0.00 0.00 3.55
4504 5116 3.507162 ATCTCCACATGAACACAACCA 57.493 42.857 0.00 0.00 0.00 3.67
4505 5117 7.047891 TCTATAATCTCCACATGAACACAACC 58.952 38.462 0.00 0.00 0.00 3.77
4506 5118 8.492673 TTCTATAATCTCCACATGAACACAAC 57.507 34.615 0.00 0.00 0.00 3.32
4507 5119 9.685276 ATTTCTATAATCTCCACATGAACACAA 57.315 29.630 0.00 0.00 0.00 3.33
4544 5156 2.099141 TCAGGTGATTGTGCACTAGC 57.901 50.000 19.41 14.38 38.78 3.42
4545 5157 5.633830 ATTTTCAGGTGATTGTGCACTAG 57.366 39.130 19.41 0.00 38.78 2.57
4546 5158 5.048083 GGAATTTTCAGGTGATTGTGCACTA 60.048 40.000 19.41 11.52 38.78 2.74
4547 5159 4.262164 GGAATTTTCAGGTGATTGTGCACT 60.262 41.667 19.41 0.00 38.78 4.40
4548 5160 3.989817 GGAATTTTCAGGTGATTGTGCAC 59.010 43.478 10.75 10.75 38.05 4.57
4549 5161 3.896888 AGGAATTTTCAGGTGATTGTGCA 59.103 39.130 0.00 0.00 0.00 4.57
4550 5162 4.525912 AGGAATTTTCAGGTGATTGTGC 57.474 40.909 0.00 0.00 0.00 4.57
4551 5163 7.661040 ACTTAAGGAATTTTCAGGTGATTGTG 58.339 34.615 7.53 0.00 0.00 3.33
4552 5164 7.839680 ACTTAAGGAATTTTCAGGTGATTGT 57.160 32.000 7.53 0.00 0.00 2.71
4553 5165 9.196552 GAAACTTAAGGAATTTTCAGGTGATTG 57.803 33.333 7.53 0.00 35.41 2.67
4554 5166 8.923270 TGAAACTTAAGGAATTTTCAGGTGATT 58.077 29.630 12.51 0.00 38.55 2.57
4555 5167 8.477419 TGAAACTTAAGGAATTTTCAGGTGAT 57.523 30.769 12.51 0.00 38.55 3.06
4556 5168 7.889873 TGAAACTTAAGGAATTTTCAGGTGA 57.110 32.000 12.51 0.00 38.55 4.02
4557 5169 9.196552 GATTGAAACTTAAGGAATTTTCAGGTG 57.803 33.333 14.82 0.00 42.06 4.00
4558 5170 8.923270 TGATTGAAACTTAAGGAATTTTCAGGT 58.077 29.630 14.82 10.32 42.06 4.00
4559 5171 9.762933 TTGATTGAAACTTAAGGAATTTTCAGG 57.237 29.630 14.82 0.00 42.06 3.86
4573 5185 9.300681 TCCAGTTGAGATTATTGATTGAAACTT 57.699 29.630 0.00 0.00 0.00 2.66
4574 5186 8.868522 TCCAGTTGAGATTATTGATTGAAACT 57.131 30.769 0.00 0.00 0.00 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.