Multiple sequence alignment - TraesCS6B01G396200
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6B01G396200 | chr6B | 100.000 | 7644 | 0 | 0 | 1 | 7644 | 672361239 | 672368882 | 0.000000e+00 | 14116.0 |
1 | TraesCS6B01G396200 | chr6B | 92.441 | 635 | 47 | 1 | 1 | 635 | 82188333 | 82188966 | 0.000000e+00 | 905.0 |
2 | TraesCS6B01G396200 | chr6B | 83.041 | 342 | 36 | 13 | 6488 | 6818 | 672406864 | 672407194 | 2.700000e-74 | 291.0 |
3 | TraesCS6B01G396200 | chr6B | 83.333 | 132 | 18 | 3 | 635 | 765 | 645346615 | 645346743 | 1.350000e-22 | 119.0 |
4 | TraesCS6B01G396200 | chr6A | 92.952 | 3746 | 172 | 41 | 2001 | 5699 | 592435426 | 592439126 | 0.000000e+00 | 5371.0 |
5 | TraesCS6B01G396200 | chr6A | 92.248 | 516 | 25 | 6 | 5827 | 6335 | 592439124 | 592439631 | 0.000000e+00 | 717.0 |
6 | TraesCS6B01G396200 | chr6A | 92.229 | 489 | 34 | 3 | 1514 | 2001 | 592434887 | 592435372 | 0.000000e+00 | 689.0 |
7 | TraesCS6B01G396200 | chr6A | 85.513 | 711 | 40 | 10 | 800 | 1471 | 592433985 | 592434671 | 0.000000e+00 | 684.0 |
8 | TraesCS6B01G396200 | chr6A | 87.313 | 536 | 41 | 14 | 6332 | 6847 | 592439991 | 592440519 | 8.540000e-164 | 588.0 |
9 | TraesCS6B01G396200 | chr6A | 86.923 | 260 | 26 | 3 | 5233 | 5492 | 101615285 | 101615536 | 1.260000e-72 | 285.0 |
10 | TraesCS6B01G396200 | chr6A | 81.163 | 361 | 40 | 13 | 6580 | 6922 | 592455575 | 592455925 | 1.640000e-66 | 265.0 |
11 | TraesCS6B01G396200 | chr6A | 84.681 | 235 | 26 | 6 | 4981 | 5206 | 536253968 | 536253735 | 7.720000e-55 | 226.0 |
12 | TraesCS6B01G396200 | chr6A | 88.060 | 134 | 14 | 2 | 5696 | 5828 | 30435508 | 30435376 | 2.860000e-34 | 158.0 |
13 | TraesCS6B01G396200 | chr3D | 87.559 | 2982 | 245 | 56 | 2052 | 4980 | 612316805 | 612313897 | 0.000000e+00 | 3336.0 |
14 | TraesCS6B01G396200 | chr3D | 90.709 | 635 | 56 | 3 | 1 | 635 | 12499775 | 12500406 | 0.000000e+00 | 843.0 |
15 | TraesCS6B01G396200 | chr3D | 88.819 | 635 | 70 | 1 | 1 | 635 | 553475825 | 553476458 | 0.000000e+00 | 778.0 |
16 | TraesCS6B01G396200 | chr3D | 89.056 | 466 | 44 | 3 | 5204 | 5665 | 612313904 | 612313442 | 8.610000e-159 | 571.0 |
17 | TraesCS6B01G396200 | chr3D | 77.171 | 1117 | 135 | 59 | 5842 | 6932 | 612313426 | 612312404 | 2.430000e-149 | 540.0 |
18 | TraesCS6B01G396200 | chr3D | 79.566 | 553 | 61 | 31 | 1476 | 1994 | 612317425 | 612316891 | 1.580000e-91 | 348.0 |
19 | TraesCS6B01G396200 | chr3D | 90.952 | 210 | 18 | 1 | 7436 | 7644 | 498400468 | 498400259 | 1.620000e-71 | 281.0 |
20 | TraesCS6B01G396200 | chr3D | 89.447 | 199 | 21 | 0 | 7442 | 7640 | 560074948 | 560075146 | 1.270000e-62 | 252.0 |
21 | TraesCS6B01G396200 | chr3D | 93.798 | 129 | 8 | 0 | 5700 | 5828 | 414642445 | 414642317 | 2.180000e-45 | 195.0 |
22 | TraesCS6B01G396200 | chr3D | 93.694 | 111 | 5 | 2 | 5699 | 5807 | 305251201 | 305251091 | 1.710000e-36 | 165.0 |
23 | TraesCS6B01G396200 | chr3D | 89.076 | 119 | 12 | 1 | 5087 | 5204 | 337952720 | 337952838 | 6.180000e-31 | 147.0 |
24 | TraesCS6B01G396200 | chr3D | 86.822 | 129 | 14 | 3 | 635 | 762 | 492112403 | 492112529 | 2.880000e-29 | 141.0 |
25 | TraesCS6B01G396200 | chr3D | 83.007 | 153 | 22 | 3 | 1850 | 2001 | 45494530 | 45494381 | 1.340000e-27 | 135.0 |
26 | TraesCS6B01G396200 | chr6D | 93.494 | 2152 | 89 | 23 | 3336 | 5460 | 445764260 | 445766387 | 0.000000e+00 | 3151.0 |
27 | TraesCS6B01G396200 | chr6D | 92.525 | 883 | 48 | 9 | 5827 | 6700 | 445766783 | 445767656 | 0.000000e+00 | 1249.0 |
28 | TraesCS6B01G396200 | chr6D | 95.362 | 733 | 28 | 3 | 2001 | 2727 | 445762895 | 445763627 | 0.000000e+00 | 1160.0 |
29 | TraesCS6B01G396200 | chr6D | 92.845 | 573 | 20 | 6 | 2725 | 3294 | 445763708 | 445764262 | 0.000000e+00 | 811.0 |
30 | TraesCS6B01G396200 | chr6D | 94.737 | 494 | 20 | 3 | 1514 | 2001 | 445762348 | 445762841 | 0.000000e+00 | 763.0 |
31 | TraesCS6B01G396200 | chr6D | 83.044 | 749 | 46 | 30 | 800 | 1471 | 445761461 | 445762205 | 8.480000e-169 | 604.0 |
32 | TraesCS6B01G396200 | chr6D | 85.591 | 465 | 38 | 17 | 6994 | 7435 | 445769598 | 445770056 | 1.940000e-125 | 460.0 |
33 | TraesCS6B01G396200 | chr6D | 90.984 | 244 | 13 | 4 | 5459 | 5699 | 445766548 | 445766785 | 3.440000e-83 | 320.0 |
34 | TraesCS6B01G396200 | chr6D | 86.441 | 236 | 21 | 6 | 4981 | 5206 | 389973735 | 389973501 | 1.650000e-61 | 248.0 |
35 | TraesCS6B01G396200 | chr6D | 94.118 | 102 | 5 | 1 | 6692 | 6793 | 445769113 | 445769213 | 3.690000e-33 | 154.0 |
36 | TraesCS6B01G396200 | chr6D | 91.111 | 45 | 3 | 1 | 6947 | 6991 | 24623841 | 24623884 | 8.280000e-05 | 60.2 |
37 | TraesCS6B01G396200 | chr3B | 85.687 | 3109 | 299 | 74 | 1476 | 4482 | 826621629 | 826624693 | 0.000000e+00 | 3142.0 |
38 | TraesCS6B01G396200 | chr3B | 86.780 | 1702 | 140 | 36 | 2020 | 3661 | 826647234 | 826648910 | 0.000000e+00 | 1818.0 |
39 | TraesCS6B01G396200 | chr3B | 89.689 | 1319 | 115 | 16 | 3666 | 4978 | 826649010 | 826650313 | 0.000000e+00 | 1663.0 |
40 | TraesCS6B01G396200 | chr3B | 89.047 | 1123 | 109 | 12 | 3365 | 4482 | 826595538 | 826596651 | 0.000000e+00 | 1380.0 |
41 | TraesCS6B01G396200 | chr3B | 88.869 | 1123 | 111 | 12 | 3365 | 4482 | 826455127 | 826456240 | 0.000000e+00 | 1369.0 |
42 | TraesCS6B01G396200 | chr3B | 77.884 | 1049 | 123 | 59 | 5912 | 6932 | 826650839 | 826651806 | 1.120000e-152 | 551.0 |
43 | TraesCS6B01G396200 | chr3B | 87.152 | 467 | 49 | 6 | 5204 | 5662 | 826650308 | 826650771 | 3.160000e-143 | 520.0 |
44 | TraesCS6B01G396200 | chr3B | 78.018 | 555 | 71 | 29 | 1476 | 1994 | 826646643 | 826647182 | 1.250000e-77 | 302.0 |
45 | TraesCS6B01G396200 | chr3B | 79.108 | 493 | 57 | 24 | 1476 | 1934 | 826615772 | 826616252 | 1.610000e-76 | 298.0 |
46 | TraesCS6B01G396200 | chr3B | 88.060 | 134 | 15 | 1 | 5695 | 5827 | 753131512 | 753131645 | 2.860000e-34 | 158.0 |
47 | TraesCS6B01G396200 | chr3A | 88.344 | 1896 | 163 | 26 | 3106 | 4980 | 747006546 | 747004688 | 0.000000e+00 | 2224.0 |
48 | TraesCS6B01G396200 | chr3A | 89.265 | 857 | 74 | 11 | 2052 | 2893 | 747007521 | 747006668 | 0.000000e+00 | 1057.0 |
49 | TraesCS6B01G396200 | chr3A | 89.134 | 635 | 68 | 1 | 1 | 635 | 689850091 | 689850724 | 0.000000e+00 | 789.0 |
50 | TraesCS6B01G396200 | chr3A | 78.597 | 1126 | 141 | 55 | 5838 | 6941 | 747004071 | 747003024 | 0.000000e+00 | 652.0 |
51 | TraesCS6B01G396200 | chr3A | 77.878 | 556 | 64 | 36 | 1476 | 1996 | 747008135 | 747007604 | 2.700000e-74 | 291.0 |
52 | TraesCS6B01G396200 | chr3A | 86.861 | 137 | 17 | 1 | 5695 | 5830 | 120806248 | 120806112 | 1.330000e-32 | 152.0 |
53 | TraesCS6B01G396200 | chr3A | 89.062 | 64 | 5 | 2 | 5088 | 5150 | 455780124 | 455780062 | 2.290000e-10 | 78.7 |
54 | TraesCS6B01G396200 | chr3A | 97.500 | 40 | 1 | 0 | 6956 | 6995 | 71191747 | 71191786 | 1.380000e-07 | 69.4 |
55 | TraesCS6B01G396200 | chrUn | 88.869 | 1123 | 111 | 12 | 3365 | 4482 | 330628068 | 330629181 | 0.000000e+00 | 1369.0 |
56 | TraesCS6B01G396200 | chrUn | 87.313 | 134 | 15 | 2 | 5696 | 5827 | 80232295 | 80232428 | 1.330000e-32 | 152.0 |
57 | TraesCS6B01G396200 | chr4B | 93.810 | 630 | 39 | 0 | 1 | 630 | 517345413 | 517344784 | 0.000000e+00 | 948.0 |
58 | TraesCS6B01G396200 | chr4B | 97.674 | 43 | 1 | 0 | 6953 | 6995 | 525844418 | 525844460 | 2.960000e-09 | 75.0 |
59 | TraesCS6B01G396200 | chr4B | 97.674 | 43 | 1 | 0 | 6953 | 6995 | 624766398 | 624766356 | 2.960000e-09 | 75.0 |
60 | TraesCS6B01G396200 | chr1B | 92.767 | 636 | 43 | 3 | 1 | 635 | 26014930 | 26014297 | 0.000000e+00 | 917.0 |
61 | TraesCS6B01G396200 | chr1B | 91.981 | 636 | 50 | 1 | 1 | 635 | 556245955 | 556245320 | 0.000000e+00 | 891.0 |
62 | TraesCS6B01G396200 | chr1B | 86.598 | 97 | 11 | 2 | 5121 | 5216 | 660292029 | 660292124 | 1.050000e-18 | 106.0 |
63 | TraesCS6B01G396200 | chr7B | 90.596 | 638 | 54 | 5 | 1 | 635 | 733392554 | 733391920 | 0.000000e+00 | 841.0 |
64 | TraesCS6B01G396200 | chr7B | 88.725 | 204 | 22 | 1 | 7441 | 7644 | 334777974 | 334778176 | 1.650000e-61 | 248.0 |
65 | TraesCS6B01G396200 | chr7B | 89.655 | 116 | 10 | 2 | 635 | 749 | 71297301 | 71297415 | 6.180000e-31 | 147.0 |
66 | TraesCS6B01G396200 | chr7B | 83.007 | 153 | 22 | 3 | 1850 | 2001 | 164155040 | 164155189 | 1.340000e-27 | 135.0 |
67 | TraesCS6B01G396200 | chr1D | 89.683 | 630 | 64 | 1 | 1 | 630 | 20712074 | 20711446 | 0.000000e+00 | 802.0 |
68 | TraesCS6B01G396200 | chr1D | 88.835 | 206 | 20 | 3 | 7440 | 7644 | 493226518 | 493226721 | 4.580000e-62 | 250.0 |
69 | TraesCS6B01G396200 | chr5A | 86.923 | 260 | 25 | 4 | 5233 | 5492 | 554435931 | 554435681 | 4.520000e-72 | 283.0 |
70 | TraesCS6B01G396200 | chr5A | 86.538 | 260 | 27 | 3 | 5233 | 5492 | 20365011 | 20364760 | 5.840000e-71 | 279.0 |
71 | TraesCS6B01G396200 | chr5A | 86.538 | 260 | 26 | 4 | 5233 | 5492 | 554380534 | 554380284 | 2.100000e-70 | 278.0 |
72 | TraesCS6B01G396200 | chr5A | 89.320 | 206 | 21 | 1 | 7440 | 7644 | 638912251 | 638912456 | 2.740000e-64 | 257.0 |
73 | TraesCS6B01G396200 | chr5A | 81.122 | 196 | 26 | 8 | 5017 | 5203 | 330196080 | 330196273 | 6.180000e-31 | 147.0 |
74 | TraesCS6B01G396200 | chr5A | 90.909 | 44 | 4 | 0 | 6953 | 6996 | 325923612 | 325923655 | 8.280000e-05 | 60.2 |
75 | TraesCS6B01G396200 | chr4A | 86.590 | 261 | 26 | 4 | 5233 | 5492 | 197480816 | 197480564 | 5.840000e-71 | 279.0 |
76 | TraesCS6B01G396200 | chr4A | 83.594 | 128 | 16 | 5 | 635 | 759 | 731933969 | 731933844 | 1.740000e-21 | 115.0 |
77 | TraesCS6B01G396200 | chr5D | 91.837 | 196 | 15 | 1 | 7435 | 7629 | 344691802 | 344691607 | 9.770000e-69 | 272.0 |
78 | TraesCS6B01G396200 | chr5D | 89.447 | 199 | 20 | 1 | 7440 | 7638 | 515850030 | 515850227 | 4.580000e-62 | 250.0 |
79 | TraesCS6B01G396200 | chr5D | 88.406 | 207 | 23 | 1 | 7439 | 7644 | 108339365 | 108339571 | 1.650000e-61 | 248.0 |
80 | TraesCS6B01G396200 | chr5D | 90.769 | 130 | 9 | 3 | 635 | 763 | 427245862 | 427245735 | 3.670000e-38 | 171.0 |
81 | TraesCS6B01G396200 | chr5D | 85.606 | 132 | 16 | 3 | 635 | 765 | 305726971 | 305727100 | 1.340000e-27 | 135.0 |
82 | TraesCS6B01G396200 | chr5D | 86.154 | 130 | 10 | 7 | 635 | 762 | 482528021 | 482527898 | 4.810000e-27 | 134.0 |
83 | TraesCS6B01G396200 | chr5D | 97.674 | 43 | 1 | 0 | 6953 | 6995 | 557005139 | 557005097 | 2.960000e-09 | 75.0 |
84 | TraesCS6B01G396200 | chr4D | 88.095 | 210 | 21 | 4 | 7438 | 7644 | 8891974 | 8892182 | 5.920000e-61 | 246.0 |
85 | TraesCS6B01G396200 | chr4D | 85.496 | 131 | 13 | 6 | 635 | 763 | 328326027 | 328326153 | 1.730000e-26 | 132.0 |
86 | TraesCS6B01G396200 | chr7D | 92.254 | 142 | 8 | 3 | 5694 | 5833 | 437643792 | 437643652 | 1.680000e-46 | 198.0 |
87 | TraesCS6B01G396200 | chr7D | 81.579 | 152 | 21 | 4 | 1850 | 2001 | 325936335 | 325936191 | 1.350000e-22 | 119.0 |
88 | TraesCS6B01G396200 | chr7D | 95.349 | 43 | 2 | 0 | 6953 | 6995 | 564141966 | 564142008 | 1.380000e-07 | 69.4 |
89 | TraesCS6B01G396200 | chr2D | 79.577 | 284 | 41 | 10 | 5844 | 6117 | 590977142 | 590976866 | 3.640000e-43 | 187.0 |
90 | TraesCS6B01G396200 | chr2D | 79.381 | 194 | 30 | 7 | 5019 | 5205 | 73292214 | 73292024 | 2.240000e-25 | 128.0 |
91 | TraesCS6B01G396200 | chr2D | 84.034 | 119 | 14 | 3 | 635 | 753 | 54131625 | 54131512 | 8.110000e-20 | 110.0 |
92 | TraesCS6B01G396200 | chr2B | 79.720 | 286 | 34 | 12 | 5842 | 6117 | 132500603 | 132500332 | 1.310000e-42 | 185.0 |
93 | TraesCS6B01G396200 | chr2B | 94.595 | 37 | 2 | 0 | 6953 | 6989 | 424318479 | 424318443 | 2.980000e-04 | 58.4 |
94 | TraesCS6B01G396200 | chr7A | 88.060 | 134 | 15 | 1 | 5695 | 5827 | 26675568 | 26675701 | 2.860000e-34 | 158.0 |
95 | TraesCS6B01G396200 | chr5B | 88.060 | 134 | 15 | 1 | 5695 | 5827 | 103481030 | 103481163 | 2.860000e-34 | 158.0 |
96 | TraesCS6B01G396200 | chr5B | 89.908 | 109 | 7 | 4 | 5057 | 5163 | 9504712 | 9504606 | 3.720000e-28 | 137.0 |
97 | TraesCS6B01G396200 | chr5B | 93.182 | 44 | 3 | 0 | 6953 | 6996 | 106953920 | 106953877 | 1.780000e-06 | 65.8 |
98 | TraesCS6B01G396200 | chr2A | 81.699 | 153 | 26 | 2 | 1850 | 2002 | 758293465 | 758293315 | 8.050000e-25 | 126.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6B01G396200 | chr6B | 672361239 | 672368882 | 7643 | False | 14116.000000 | 14116 | 100.000000 | 1 | 7644 | 1 | chr6B.!!$F3 | 7643 |
1 | TraesCS6B01G396200 | chr6B | 82188333 | 82188966 | 633 | False | 905.000000 | 905 | 92.441000 | 1 | 635 | 1 | chr6B.!!$F1 | 634 |
2 | TraesCS6B01G396200 | chr6A | 592433985 | 592440519 | 6534 | False | 1609.800000 | 5371 | 90.051000 | 800 | 6847 | 5 | chr6A.!!$F3 | 6047 |
3 | TraesCS6B01G396200 | chr3D | 612312404 | 612317425 | 5021 | True | 1198.750000 | 3336 | 83.338000 | 1476 | 6932 | 4 | chr3D.!!$R5 | 5456 |
4 | TraesCS6B01G396200 | chr3D | 12499775 | 12500406 | 631 | False | 843.000000 | 843 | 90.709000 | 1 | 635 | 1 | chr3D.!!$F1 | 634 |
5 | TraesCS6B01G396200 | chr3D | 553475825 | 553476458 | 633 | False | 778.000000 | 778 | 88.819000 | 1 | 635 | 1 | chr3D.!!$F4 | 634 |
6 | TraesCS6B01G396200 | chr6D | 445761461 | 445770056 | 8595 | False | 963.555556 | 3151 | 91.411111 | 800 | 7435 | 9 | chr6D.!!$F2 | 6635 |
7 | TraesCS6B01G396200 | chr3B | 826621629 | 826624693 | 3064 | False | 3142.000000 | 3142 | 85.687000 | 1476 | 4482 | 1 | chr3B.!!$F5 | 3006 |
8 | TraesCS6B01G396200 | chr3B | 826595538 | 826596651 | 1113 | False | 1380.000000 | 1380 | 89.047000 | 3365 | 4482 | 1 | chr3B.!!$F3 | 1117 |
9 | TraesCS6B01G396200 | chr3B | 826455127 | 826456240 | 1113 | False | 1369.000000 | 1369 | 88.869000 | 3365 | 4482 | 1 | chr3B.!!$F2 | 1117 |
10 | TraesCS6B01G396200 | chr3B | 826646643 | 826651806 | 5163 | False | 970.800000 | 1818 | 83.904600 | 1476 | 6932 | 5 | chr3B.!!$F6 | 5456 |
11 | TraesCS6B01G396200 | chr3A | 747003024 | 747008135 | 5111 | True | 1056.000000 | 2224 | 83.521000 | 1476 | 6941 | 4 | chr3A.!!$R3 | 5465 |
12 | TraesCS6B01G396200 | chr3A | 689850091 | 689850724 | 633 | False | 789.000000 | 789 | 89.134000 | 1 | 635 | 1 | chr3A.!!$F2 | 634 |
13 | TraesCS6B01G396200 | chrUn | 330628068 | 330629181 | 1113 | False | 1369.000000 | 1369 | 88.869000 | 3365 | 4482 | 1 | chrUn.!!$F2 | 1117 |
14 | TraesCS6B01G396200 | chr4B | 517344784 | 517345413 | 629 | True | 948.000000 | 948 | 93.810000 | 1 | 630 | 1 | chr4B.!!$R1 | 629 |
15 | TraesCS6B01G396200 | chr1B | 26014297 | 26014930 | 633 | True | 917.000000 | 917 | 92.767000 | 1 | 635 | 1 | chr1B.!!$R1 | 634 |
16 | TraesCS6B01G396200 | chr1B | 556245320 | 556245955 | 635 | True | 891.000000 | 891 | 91.981000 | 1 | 635 | 1 | chr1B.!!$R2 | 634 |
17 | TraesCS6B01G396200 | chr7B | 733391920 | 733392554 | 634 | True | 841.000000 | 841 | 90.596000 | 1 | 635 | 1 | chr7B.!!$R1 | 634 |
18 | TraesCS6B01G396200 | chr1D | 20711446 | 20712074 | 628 | True | 802.000000 | 802 | 89.683000 | 1 | 630 | 1 | chr1D.!!$R1 | 629 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
668 | 673 | 0.313987 | GCTTTTGGTCTGAAACGGGG | 59.686 | 55.0 | 0.00 | 0.00 | 0.00 | 5.73 | F |
850 | 856 | 0.834612 | ATCCTAATCGAACGGCCCAA | 59.165 | 50.0 | 0.00 | 0.00 | 0.00 | 4.12 | F |
1526 | 1827 | 0.246086 | CCTGAGTGAGTGTGCTCCTC | 59.754 | 60.0 | 0.00 | 0.00 | 40.95 | 3.71 | F |
2998 | 3538 | 0.310854 | ACGGCTTTTGTGCTTGTAGC | 59.689 | 50.0 | 0.00 | 0.00 | 42.82 | 3.58 | F |
4076 | 4758 | 0.179121 | TAACGTCAGTATGCCGGCAG | 60.179 | 55.0 | 35.36 | 21.14 | 34.76 | 4.85 | F |
5715 | 6664 | 0.248743 | TTAGGCGCTGTTCGGTATCG | 60.249 | 55.0 | 7.64 | 0.00 | 38.94 | 2.92 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1507 | 1805 | 0.246086 | GAGGAGCACACTCACTCAGG | 59.754 | 60.000 | 0.00 | 0.00 | 45.42 | 3.86 | R |
2350 | 2786 | 1.065854 | ACATCTGTGCCACCTAGAAGC | 60.066 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 | R |
3332 | 3900 | 0.535102 | AGAAAGGTCAAGTGGCACCG | 60.535 | 55.000 | 15.27 | 6.13 | 37.79 | 4.94 | R |
4889 | 5587 | 1.202604 | ACACACGGAGTAAGTTGTGGG | 60.203 | 52.381 | 5.63 | 0.00 | 41.61 | 4.61 | R |
5750 | 6699 | 0.038892 | CGCCATTTTGAACTGCAGCT | 60.039 | 50.000 | 15.27 | 0.00 | 0.00 | 4.24 | R |
7499 | 10544 | 0.030235 | GTTGGGCCGACTTTTGTGTC | 59.970 | 55.000 | 17.07 | 0.00 | 0.00 | 3.67 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
20 | 21 | 2.978010 | CTTTTCCGGCGCTGGTGT | 60.978 | 61.111 | 33.59 | 0.00 | 0.00 | 4.16 |
112 | 114 | 1.684248 | GGGCATTCTCTGTGGCATTCT | 60.684 | 52.381 | 0.00 | 0.00 | 43.28 | 2.40 |
134 | 136 | 4.800355 | TCGATCGACGAGTCTCGA | 57.200 | 55.556 | 28.33 | 15.81 | 46.45 | 4.04 |
136 | 138 | 0.457337 | TCGATCGACGAGTCTCGACA | 60.457 | 55.000 | 28.33 | 13.03 | 45.14 | 4.35 |
198 | 200 | 4.980805 | GCCTCCGTTGCGTGTGGA | 62.981 | 66.667 | 0.00 | 0.00 | 0.00 | 4.02 |
357 | 362 | 0.469705 | TGGTTGCTCATGTTTGGCCT | 60.470 | 50.000 | 3.32 | 0.00 | 0.00 | 5.19 |
369 | 374 | 1.747325 | TTTGGCCTTCTGGTTGCAGC | 61.747 | 55.000 | 3.32 | 0.00 | 35.27 | 5.25 |
403 | 408 | 2.215451 | ATTGCCCGATGTTGCCCTCT | 62.215 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
549 | 554 | 9.653287 | TTTCTCTGTTGTGTAATTCCTATGTAG | 57.347 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
599 | 604 | 3.459063 | GCCGGCCTAGGTTCGAGT | 61.459 | 66.667 | 18.11 | 0.00 | 0.00 | 4.18 |
636 | 641 | 4.668576 | GCCAATGCCTTTTCTTTAAAGC | 57.331 | 40.909 | 10.51 | 0.00 | 41.60 | 3.51 |
637 | 642 | 3.436704 | GCCAATGCCTTTTCTTTAAAGCC | 59.563 | 43.478 | 10.51 | 0.00 | 41.60 | 4.35 |
638 | 643 | 4.803924 | GCCAATGCCTTTTCTTTAAAGCCT | 60.804 | 41.667 | 10.51 | 0.00 | 41.60 | 4.58 |
639 | 644 | 4.931601 | CCAATGCCTTTTCTTTAAAGCCTC | 59.068 | 41.667 | 10.51 | 0.00 | 41.60 | 4.70 |
640 | 645 | 3.915437 | TGCCTTTTCTTTAAAGCCTCG | 57.085 | 42.857 | 10.51 | 0.00 | 41.60 | 4.63 |
641 | 646 | 2.030274 | TGCCTTTTCTTTAAAGCCTCGC | 60.030 | 45.455 | 10.51 | 8.37 | 41.60 | 5.03 |
642 | 647 | 2.229062 | GCCTTTTCTTTAAAGCCTCGCT | 59.771 | 45.455 | 10.51 | 0.00 | 41.60 | 4.93 |
643 | 648 | 3.439129 | GCCTTTTCTTTAAAGCCTCGCTA | 59.561 | 43.478 | 10.51 | 0.00 | 41.60 | 4.26 |
644 | 649 | 4.082949 | GCCTTTTCTTTAAAGCCTCGCTAA | 60.083 | 41.667 | 10.51 | 0.00 | 41.60 | 3.09 |
645 | 650 | 5.631992 | CCTTTTCTTTAAAGCCTCGCTAAG | 58.368 | 41.667 | 10.51 | 5.81 | 41.60 | 2.18 |
646 | 651 | 4.680171 | TTTCTTTAAAGCCTCGCTAAGC | 57.320 | 40.909 | 10.51 | 0.00 | 38.25 | 3.09 |
647 | 652 | 3.328382 | TCTTTAAAGCCTCGCTAAGCA | 57.672 | 42.857 | 10.51 | 0.00 | 38.25 | 3.91 |
648 | 653 | 3.873910 | TCTTTAAAGCCTCGCTAAGCAT | 58.126 | 40.909 | 10.51 | 0.00 | 38.25 | 3.79 |
649 | 654 | 3.623060 | TCTTTAAAGCCTCGCTAAGCATG | 59.377 | 43.478 | 10.51 | 0.00 | 38.25 | 4.06 |
650 | 655 | 1.299541 | TAAAGCCTCGCTAAGCATGC | 58.700 | 50.000 | 10.51 | 10.51 | 38.25 | 4.06 |
651 | 656 | 0.393537 | AAAGCCTCGCTAAGCATGCT | 60.394 | 50.000 | 16.30 | 16.30 | 38.25 | 3.79 |
652 | 657 | 0.393537 | AAGCCTCGCTAAGCATGCTT | 60.394 | 50.000 | 33.70 | 33.70 | 38.25 | 3.91 |
653 | 658 | 0.393537 | AGCCTCGCTAAGCATGCTTT | 60.394 | 50.000 | 35.99 | 20.50 | 36.99 | 3.51 |
654 | 659 | 0.453390 | GCCTCGCTAAGCATGCTTTT | 59.547 | 50.000 | 35.99 | 17.60 | 37.47 | 2.27 |
655 | 660 | 1.796617 | GCCTCGCTAAGCATGCTTTTG | 60.797 | 52.381 | 35.99 | 27.55 | 37.47 | 2.44 |
656 | 661 | 1.202222 | CCTCGCTAAGCATGCTTTTGG | 60.202 | 52.381 | 35.99 | 25.20 | 37.47 | 3.28 |
657 | 662 | 1.470098 | CTCGCTAAGCATGCTTTTGGT | 59.530 | 47.619 | 35.99 | 16.04 | 37.47 | 3.67 |
658 | 663 | 1.468520 | TCGCTAAGCATGCTTTTGGTC | 59.531 | 47.619 | 35.99 | 19.04 | 37.47 | 4.02 |
659 | 664 | 1.470098 | CGCTAAGCATGCTTTTGGTCT | 59.530 | 47.619 | 35.99 | 14.50 | 37.47 | 3.85 |
660 | 665 | 2.730090 | CGCTAAGCATGCTTTTGGTCTG | 60.730 | 50.000 | 35.99 | 17.95 | 37.47 | 3.51 |
661 | 666 | 2.489329 | GCTAAGCATGCTTTTGGTCTGA | 59.511 | 45.455 | 35.99 | 15.86 | 37.47 | 3.27 |
662 | 667 | 3.057315 | GCTAAGCATGCTTTTGGTCTGAA | 60.057 | 43.478 | 35.99 | 15.14 | 37.47 | 3.02 |
663 | 668 | 4.559300 | GCTAAGCATGCTTTTGGTCTGAAA | 60.559 | 41.667 | 35.99 | 14.41 | 37.47 | 2.69 |
664 | 669 | 3.375782 | AGCATGCTTTTGGTCTGAAAC | 57.624 | 42.857 | 16.30 | 0.00 | 0.00 | 2.78 |
665 | 670 | 2.053627 | GCATGCTTTTGGTCTGAAACG | 58.946 | 47.619 | 11.37 | 0.00 | 0.00 | 3.60 |
666 | 671 | 2.664916 | CATGCTTTTGGTCTGAAACGG | 58.335 | 47.619 | 0.00 | 0.00 | 0.00 | 4.44 |
667 | 672 | 1.028905 | TGCTTTTGGTCTGAAACGGG | 58.971 | 50.000 | 0.00 | 0.00 | 0.00 | 5.28 |
668 | 673 | 0.313987 | GCTTTTGGTCTGAAACGGGG | 59.686 | 55.000 | 0.00 | 0.00 | 0.00 | 5.73 |
669 | 674 | 0.958822 | CTTTTGGTCTGAAACGGGGG | 59.041 | 55.000 | 0.00 | 0.00 | 0.00 | 5.40 |
670 | 675 | 1.110518 | TTTTGGTCTGAAACGGGGGC | 61.111 | 55.000 | 0.00 | 0.00 | 0.00 | 5.80 |
671 | 676 | 3.835790 | TTGGTCTGAAACGGGGGCG | 62.836 | 63.158 | 0.00 | 0.00 | 0.00 | 6.13 |
707 | 712 | 9.557061 | GTTATTAAACCCCCTAGACTTAGATTG | 57.443 | 37.037 | 0.00 | 0.00 | 0.00 | 2.67 |
708 | 713 | 7.766736 | ATTAAACCCCCTAGACTTAGATTGT | 57.233 | 36.000 | 0.00 | 0.00 | 0.00 | 2.71 |
709 | 714 | 8.865244 | ATTAAACCCCCTAGACTTAGATTGTA | 57.135 | 34.615 | 0.00 | 0.00 | 0.00 | 2.41 |
710 | 715 | 8.865244 | TTAAACCCCCTAGACTTAGATTGTAT | 57.135 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
711 | 716 | 6.997942 | AACCCCCTAGACTTAGATTGTATC | 57.002 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
712 | 717 | 5.404395 | ACCCCCTAGACTTAGATTGTATCC | 58.596 | 45.833 | 0.00 | 0.00 | 0.00 | 2.59 |
713 | 718 | 5.138123 | ACCCCCTAGACTTAGATTGTATCCT | 59.862 | 44.000 | 0.00 | 0.00 | 0.00 | 3.24 |
714 | 719 | 6.337472 | ACCCCCTAGACTTAGATTGTATCCTA | 59.663 | 42.308 | 0.00 | 0.00 | 0.00 | 2.94 |
715 | 720 | 7.020781 | ACCCCCTAGACTTAGATTGTATCCTAT | 59.979 | 40.741 | 0.00 | 0.00 | 0.00 | 2.57 |
716 | 721 | 7.343316 | CCCCCTAGACTTAGATTGTATCCTATG | 59.657 | 44.444 | 0.00 | 0.00 | 0.00 | 2.23 |
717 | 722 | 8.116669 | CCCCTAGACTTAGATTGTATCCTATGA | 58.883 | 40.741 | 0.00 | 0.00 | 0.00 | 2.15 |
718 | 723 | 9.535170 | CCCTAGACTTAGATTGTATCCTATGAA | 57.465 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
752 | 757 | 7.801716 | TCAATAAAGCAAGTGTGTTTAGACT | 57.198 | 32.000 | 0.00 | 0.00 | 30.59 | 3.24 |
753 | 758 | 7.861630 | TCAATAAAGCAAGTGTGTTTAGACTC | 58.138 | 34.615 | 0.00 | 0.00 | 28.86 | 3.36 |
754 | 759 | 7.497579 | TCAATAAAGCAAGTGTGTTTAGACTCA | 59.502 | 33.333 | 0.00 | 0.00 | 28.86 | 3.41 |
755 | 760 | 5.741388 | AAAGCAAGTGTGTTTAGACTCAG | 57.259 | 39.130 | 0.00 | 0.00 | 30.58 | 3.35 |
756 | 761 | 4.672587 | AGCAAGTGTGTTTAGACTCAGA | 57.327 | 40.909 | 0.00 | 0.00 | 30.58 | 3.27 |
757 | 762 | 5.023533 | AGCAAGTGTGTTTAGACTCAGAA | 57.976 | 39.130 | 0.00 | 0.00 | 30.58 | 3.02 |
758 | 763 | 5.428253 | AGCAAGTGTGTTTAGACTCAGAAA | 58.572 | 37.500 | 0.00 | 0.00 | 30.58 | 2.52 |
759 | 764 | 5.880332 | AGCAAGTGTGTTTAGACTCAGAAAA | 59.120 | 36.000 | 0.00 | 0.00 | 30.58 | 2.29 |
760 | 765 | 6.374333 | AGCAAGTGTGTTTAGACTCAGAAAAA | 59.626 | 34.615 | 0.00 | 0.00 | 30.58 | 1.94 |
784 | 789 | 7.739498 | AAAACTTAACACACCGTATGATTCT | 57.261 | 32.000 | 0.00 | 0.00 | 0.00 | 2.40 |
785 | 790 | 8.836268 | AAAACTTAACACACCGTATGATTCTA | 57.164 | 30.769 | 0.00 | 0.00 | 0.00 | 2.10 |
786 | 791 | 8.836268 | AAACTTAACACACCGTATGATTCTAA | 57.164 | 30.769 | 0.00 | 0.00 | 0.00 | 2.10 |
787 | 792 | 8.836268 | AACTTAACACACCGTATGATTCTAAA | 57.164 | 30.769 | 0.00 | 0.00 | 0.00 | 1.85 |
788 | 793 | 8.836268 | ACTTAACACACCGTATGATTCTAAAA | 57.164 | 30.769 | 0.00 | 0.00 | 0.00 | 1.52 |
789 | 794 | 9.275398 | ACTTAACACACCGTATGATTCTAAAAA | 57.725 | 29.630 | 0.00 | 0.00 | 0.00 | 1.94 |
848 | 854 | 1.226746 | CAATCCTAATCGAACGGCCC | 58.773 | 55.000 | 0.00 | 0.00 | 0.00 | 5.80 |
850 | 856 | 0.834612 | ATCCTAATCGAACGGCCCAA | 59.165 | 50.000 | 0.00 | 0.00 | 0.00 | 4.12 |
879 | 885 | 4.832248 | TCGAAGCAAAATCACCTCAGTAT | 58.168 | 39.130 | 0.00 | 0.00 | 0.00 | 2.12 |
880 | 886 | 5.972935 | TCGAAGCAAAATCACCTCAGTATA | 58.027 | 37.500 | 0.00 | 0.00 | 0.00 | 1.47 |
881 | 887 | 6.042777 | TCGAAGCAAAATCACCTCAGTATAG | 58.957 | 40.000 | 0.00 | 0.00 | 0.00 | 1.31 |
882 | 888 | 5.277058 | CGAAGCAAAATCACCTCAGTATAGC | 60.277 | 44.000 | 0.00 | 0.00 | 0.00 | 2.97 |
883 | 889 | 5.365021 | AGCAAAATCACCTCAGTATAGCT | 57.635 | 39.130 | 0.00 | 0.00 | 0.00 | 3.32 |
884 | 890 | 5.749462 | AGCAAAATCACCTCAGTATAGCTT | 58.251 | 37.500 | 0.00 | 0.00 | 0.00 | 3.74 |
885 | 891 | 5.587844 | AGCAAAATCACCTCAGTATAGCTTG | 59.412 | 40.000 | 0.00 | 0.00 | 0.00 | 4.01 |
886 | 892 | 5.220931 | GCAAAATCACCTCAGTATAGCTTGG | 60.221 | 44.000 | 0.00 | 0.00 | 0.00 | 3.61 |
887 | 893 | 3.760580 | ATCACCTCAGTATAGCTTGGC | 57.239 | 47.619 | 0.00 | 0.00 | 0.00 | 4.52 |
1059 | 1075 | 4.501285 | TCTCTCCGCGGGTCCGAT | 62.501 | 66.667 | 27.83 | 0.00 | 42.83 | 4.18 |
1122 | 1138 | 1.269723 | GACGAGGACGATGGATATGCA | 59.730 | 52.381 | 0.00 | 0.00 | 42.66 | 3.96 |
1164 | 1207 | 1.590259 | GCTCGATGAAGAGGACGGC | 60.590 | 63.158 | 0.00 | 0.00 | 38.63 | 5.68 |
1366 | 1456 | 4.775253 | TGTGATTCACCTACACATGGAGTA | 59.225 | 41.667 | 14.05 | 0.00 | 39.17 | 2.59 |
1373 | 1463 | 6.170506 | TCACCTACACATGGAGTATTGTTTC | 58.829 | 40.000 | 0.00 | 0.00 | 0.00 | 2.78 |
1436 | 1533 | 3.129988 | CCCCTCAATTGACTCTTCATTGC | 59.870 | 47.826 | 3.38 | 0.00 | 0.00 | 3.56 |
1437 | 1534 | 4.015084 | CCCTCAATTGACTCTTCATTGCT | 58.985 | 43.478 | 3.38 | 0.00 | 0.00 | 3.91 |
1438 | 1535 | 5.188434 | CCCTCAATTGACTCTTCATTGCTA | 58.812 | 41.667 | 3.38 | 0.00 | 0.00 | 3.49 |
1439 | 1536 | 5.065731 | CCCTCAATTGACTCTTCATTGCTAC | 59.934 | 44.000 | 3.38 | 0.00 | 0.00 | 3.58 |
1471 | 1568 | 2.017049 | GCCCAGCGATGACATTAGTTT | 58.983 | 47.619 | 0.06 | 0.00 | 0.00 | 2.66 |
1472 | 1569 | 2.032178 | GCCCAGCGATGACATTAGTTTC | 59.968 | 50.000 | 0.06 | 0.00 | 0.00 | 2.78 |
1473 | 1570 | 2.614057 | CCCAGCGATGACATTAGTTTCC | 59.386 | 50.000 | 0.06 | 0.00 | 0.00 | 3.13 |
1474 | 1571 | 3.270027 | CCAGCGATGACATTAGTTTCCA | 58.730 | 45.455 | 0.06 | 0.00 | 0.00 | 3.53 |
1494 | 1792 | 3.599343 | CATGCTACTGCTGGAGTTGTAA | 58.401 | 45.455 | 7.25 | 0.00 | 40.48 | 2.41 |
1500 | 1798 | 3.206150 | ACTGCTGGAGTTGTAAGTGTTG | 58.794 | 45.455 | 0.00 | 0.00 | 0.00 | 3.33 |
1501 | 1799 | 3.206150 | CTGCTGGAGTTGTAAGTGTTGT | 58.794 | 45.455 | 0.00 | 0.00 | 0.00 | 3.32 |
1502 | 1800 | 2.942376 | TGCTGGAGTTGTAAGTGTTGTG | 59.058 | 45.455 | 0.00 | 0.00 | 0.00 | 3.33 |
1503 | 1801 | 2.943033 | GCTGGAGTTGTAAGTGTTGTGT | 59.057 | 45.455 | 0.00 | 0.00 | 0.00 | 3.72 |
1504 | 1802 | 3.002348 | GCTGGAGTTGTAAGTGTTGTGTC | 59.998 | 47.826 | 0.00 | 0.00 | 0.00 | 3.67 |
1505 | 1803 | 4.188462 | CTGGAGTTGTAAGTGTTGTGTCA | 58.812 | 43.478 | 0.00 | 0.00 | 0.00 | 3.58 |
1506 | 1804 | 3.936453 | TGGAGTTGTAAGTGTTGTGTCAC | 59.064 | 43.478 | 0.00 | 0.00 | 38.46 | 3.67 |
1507 | 1805 | 3.311596 | GGAGTTGTAAGTGTTGTGTCACC | 59.688 | 47.826 | 0.00 | 0.00 | 38.91 | 4.02 |
1510 | 1808 | 2.912771 | TGTAAGTGTTGTGTCACCCTG | 58.087 | 47.619 | 0.00 | 0.00 | 38.91 | 4.45 |
1512 | 1810 | 2.332063 | AAGTGTTGTGTCACCCTGAG | 57.668 | 50.000 | 0.00 | 0.00 | 38.91 | 3.35 |
1526 | 1827 | 0.246086 | CCTGAGTGAGTGTGCTCCTC | 59.754 | 60.000 | 0.00 | 0.00 | 40.95 | 3.71 |
1631 | 1932 | 8.419922 | AGCCAATATACTCTAGGTAAGGTAAC | 57.580 | 38.462 | 0.00 | 0.00 | 33.74 | 2.50 |
1743 | 2069 | 2.568956 | AGATGAGCACAAGTTAGCTGGA | 59.431 | 45.455 | 6.72 | 0.00 | 42.04 | 3.86 |
1783 | 2109 | 3.735746 | GGCGATTGTTTCTTTTGTTGAGG | 59.264 | 43.478 | 0.00 | 0.00 | 0.00 | 3.86 |
1833 | 2175 | 2.645797 | CCTAACCTTTTCCTGTGGGGTA | 59.354 | 50.000 | 0.00 | 0.00 | 36.25 | 3.69 |
1994 | 2339 | 2.203470 | TCAGAAGGACAATGCATGCA | 57.797 | 45.000 | 25.04 | 25.04 | 0.00 | 3.96 |
2011 | 2414 | 4.807304 | GCATGCATTCTTCCCTTTTATGTG | 59.193 | 41.667 | 14.21 | 0.00 | 0.00 | 3.21 |
2072 | 2478 | 7.119846 | CCTTCCTTACAGATAGTTTTCCTTGTG | 59.880 | 40.741 | 0.00 | 0.00 | 0.00 | 3.33 |
2156 | 2562 | 4.054671 | GACAACTAGAGCTCATGTATGGC | 58.945 | 47.826 | 17.77 | 12.32 | 0.00 | 4.40 |
2350 | 2786 | 2.692557 | TCCCAAATTTGATATGGCACCG | 59.307 | 45.455 | 19.86 | 0.00 | 32.71 | 4.94 |
2427 | 2863 | 5.419542 | GTCAGCTTGTTTCCTTTTCCTTTT | 58.580 | 37.500 | 0.00 | 0.00 | 0.00 | 2.27 |
2439 | 2876 | 4.518970 | CCTTTTCCTTTTCACGGATCTCAA | 59.481 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
2595 | 3034 | 2.719739 | CAGGACATTGCTGATTCAGGT | 58.280 | 47.619 | 15.28 | 4.56 | 38.14 | 4.00 |
2670 | 3109 | 8.970020 | TGCCATGACTTTCATTTTGATACTAAT | 58.030 | 29.630 | 0.00 | 0.00 | 34.28 | 1.73 |
2771 | 3293 | 2.069273 | CTGAACACTCTTTAGGTGCCG | 58.931 | 52.381 | 0.00 | 0.00 | 38.14 | 5.69 |
2852 | 3390 | 7.222224 | GTCAGTTACGTCTTTTACCATATCCAG | 59.778 | 40.741 | 0.00 | 0.00 | 0.00 | 3.86 |
2926 | 3464 | 3.463700 | TGGTATCCCCAATTCCCCA | 57.536 | 52.632 | 0.00 | 0.00 | 41.50 | 4.96 |
2994 | 3534 | 4.893795 | GTAGTATACGGCTTTTGTGCTTG | 58.106 | 43.478 | 0.00 | 0.00 | 0.00 | 4.01 |
2995 | 3535 | 3.408634 | AGTATACGGCTTTTGTGCTTGT | 58.591 | 40.909 | 0.00 | 0.00 | 0.00 | 3.16 |
2996 | 3536 | 4.571919 | AGTATACGGCTTTTGTGCTTGTA | 58.428 | 39.130 | 0.00 | 0.00 | 0.00 | 2.41 |
2997 | 3537 | 4.630069 | AGTATACGGCTTTTGTGCTTGTAG | 59.370 | 41.667 | 0.00 | 0.00 | 31.48 | 2.74 |
2998 | 3538 | 0.310854 | ACGGCTTTTGTGCTTGTAGC | 59.689 | 50.000 | 0.00 | 0.00 | 42.82 | 3.58 |
2999 | 3539 | 0.387239 | CGGCTTTTGTGCTTGTAGCC | 60.387 | 55.000 | 0.00 | 0.00 | 46.16 | 3.93 |
3000 | 3540 | 0.961753 | GGCTTTTGTGCTTGTAGCCT | 59.038 | 50.000 | 0.00 | 0.00 | 46.14 | 4.58 |
3058 | 3598 | 7.610865 | AGATTGCTCCTTCTAGTGCTATTATC | 58.389 | 38.462 | 0.00 | 0.00 | 0.00 | 1.75 |
3129 | 3695 | 7.759489 | TTGCTAGTGTTTGGAGACATTTAAT | 57.241 | 32.000 | 0.00 | 0.00 | 42.32 | 1.40 |
3183 | 3749 | 2.413112 | CCGTGTTTGTGAGAGCTACATG | 59.587 | 50.000 | 0.00 | 0.00 | 0.00 | 3.21 |
3293 | 3861 | 4.637483 | TCCTGCTTATGTGCTAAAATGC | 57.363 | 40.909 | 0.00 | 0.00 | 0.00 | 3.56 |
3306 | 3874 | 5.005299 | GTGCTAAAATGCAACACGTTTCTTT | 59.995 | 36.000 | 0.00 | 0.00 | 45.12 | 2.52 |
3314 | 3882 | 9.953697 | AAATGCAACACGTTTCTTTTTATAGTA | 57.046 | 25.926 | 0.00 | 0.00 | 31.65 | 1.82 |
3332 | 3900 | 9.595823 | TTTATAGTAACTCCTCAATACACTTGC | 57.404 | 33.333 | 0.00 | 0.00 | 0.00 | 4.01 |
3441 | 4009 | 7.066645 | CCATATCCAAGCTGATATACCACATTG | 59.933 | 40.741 | 6.31 | 0.00 | 36.11 | 2.82 |
3555 | 4123 | 0.591170 | CTTGGCAAACGGTACCAGTG | 59.409 | 55.000 | 13.54 | 7.39 | 34.28 | 3.66 |
3661 | 4245 | 3.181452 | ACAGAACTTTGCCATGCCAAATT | 60.181 | 39.130 | 1.82 | 0.00 | 34.50 | 1.82 |
3831 | 4511 | 8.798859 | ACTTTGCATCCTGATGATATATTACC | 57.201 | 34.615 | 11.23 | 0.00 | 41.20 | 2.85 |
3949 | 4630 | 4.072131 | GGTCTGTTTAATGCAGGACTTCA | 58.928 | 43.478 | 0.00 | 0.00 | 34.89 | 3.02 |
3998 | 4679 | 5.222007 | CCAAGATACAATCCTATGGCCTTCT | 60.222 | 44.000 | 3.32 | 0.00 | 0.00 | 2.85 |
4058 | 4740 | 3.581770 | AGGCTCTCTGAATATGCATGCTA | 59.418 | 43.478 | 20.33 | 9.18 | 0.00 | 3.49 |
4067 | 4749 | 5.596845 | TGAATATGCATGCTAACGTCAGTA | 58.403 | 37.500 | 20.33 | 0.00 | 0.00 | 2.74 |
4076 | 4758 | 0.179121 | TAACGTCAGTATGCCGGCAG | 60.179 | 55.000 | 35.36 | 21.14 | 34.76 | 4.85 |
4151 | 4833 | 5.739959 | TGTAGAAGTTTATATGCAGTGCCA | 58.260 | 37.500 | 13.72 | 0.00 | 0.00 | 4.92 |
4329 | 5011 | 8.889849 | AAAATGTCGAATACTCGGTTAAAATG | 57.110 | 30.769 | 0.00 | 0.00 | 45.49 | 2.32 |
4371 | 5059 | 2.289694 | GCTGCCTACCATGTACTATGGG | 60.290 | 54.545 | 21.11 | 9.26 | 43.32 | 4.00 |
4391 | 5079 | 5.794894 | TGGGACTGAGACAACTATTCTTTC | 58.205 | 41.667 | 0.00 | 0.00 | 0.00 | 2.62 |
4484 | 5173 | 6.714810 | AGGTCTTTACATGAAAATGTACTGCA | 59.285 | 34.615 | 0.00 | 0.00 | 36.82 | 4.41 |
4615 | 5304 | 0.963962 | AGCTGGACTGTGGCATTTTG | 59.036 | 50.000 | 0.00 | 0.00 | 0.00 | 2.44 |
4719 | 5415 | 9.988815 | AGGTATTGAATATTGATGACAGTACTC | 57.011 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
4737 | 5433 | 6.817140 | CAGTACTCCTACATTGTTTACTTCCC | 59.183 | 42.308 | 0.00 | 0.00 | 0.00 | 3.97 |
4753 | 5449 | 5.678955 | ACTTCCCTATTACTGAACTGTCC | 57.321 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
4761 | 5459 | 7.038659 | CCTATTACTGAACTGTCCTTTGAGAG | 58.961 | 42.308 | 0.00 | 0.00 | 37.87 | 3.20 |
4857 | 5555 | 5.049818 | CCACACAGAACTCAATTCAGAAGAC | 60.050 | 44.000 | 0.00 | 0.00 | 40.09 | 3.01 |
4889 | 5587 | 0.605589 | GTGAGTTACCCAGGCACACC | 60.606 | 60.000 | 0.00 | 0.00 | 0.00 | 4.16 |
4948 | 5649 | 4.691216 | AGATCGGCTTGTTTCAGTTAGTTC | 59.309 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
4967 | 5668 | 9.099454 | GTTAGTTCATTCCTCCAAGTTATAGTG | 57.901 | 37.037 | 0.00 | 0.00 | 0.00 | 2.74 |
4991 | 5692 | 8.818057 | GTGCTTATTATATAACGGGAATGCTAG | 58.182 | 37.037 | 0.00 | 0.00 | 0.00 | 3.42 |
5025 | 5727 | 9.709495 | ACTTCAGATTTTAAGCATTGCAAATTA | 57.291 | 25.926 | 11.91 | 0.39 | 0.00 | 1.40 |
5112 | 5835 | 4.527816 | AGGATTTGCCATGCTTGTTAAAGA | 59.472 | 37.500 | 0.00 | 0.00 | 40.02 | 2.52 |
5118 | 5841 | 7.565323 | TTGCCATGCTTGTTAAAGAAAATTT | 57.435 | 28.000 | 0.00 | 0.00 | 35.19 | 1.82 |
5181 | 5904 | 5.981315 | CGATTTGCCATGCTAAAAATCTGAT | 59.019 | 36.000 | 13.79 | 0.00 | 37.04 | 2.90 |
5183 | 5906 | 4.049546 | TGCCATGCTAAAAATCTGATGC | 57.950 | 40.909 | 0.00 | 0.00 | 0.00 | 3.91 |
5247 | 5971 | 8.895845 | GCAACTATAGAAATATGCAATTCGTTG | 58.104 | 33.333 | 6.78 | 15.86 | 34.10 | 4.10 |
5284 | 6008 | 3.072944 | GCTCTGATAGCCAATTAGCCAG | 58.927 | 50.000 | 0.00 | 0.00 | 46.25 | 4.85 |
5366 | 6094 | 6.377327 | AGGGATGTATAAACTGAATTTGCG | 57.623 | 37.500 | 0.00 | 0.00 | 0.00 | 4.85 |
5417 | 6160 | 6.410942 | TCCACTCATGTCCATAACTCTATG | 57.589 | 41.667 | 0.00 | 0.00 | 35.57 | 2.23 |
5499 | 6445 | 5.148651 | ACTATTGTTGTACCTGGACACTC | 57.851 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
5514 | 6460 | 4.159135 | TGGACACTCTTATAGGGACGAAAC | 59.841 | 45.833 | 0.00 | 0.00 | 30.77 | 2.78 |
5551 | 6497 | 3.119459 | TGACATGTTCTACCTTCGAGAGC | 60.119 | 47.826 | 0.00 | 0.00 | 0.00 | 4.09 |
5663 | 6609 | 2.002586 | GAACTTCTGCAAGCATAGCGA | 58.997 | 47.619 | 0.00 | 0.00 | 32.09 | 4.93 |
5672 | 6618 | 3.129113 | TGCAAGCATAGCGATGTGAAAAT | 59.871 | 39.130 | 8.67 | 0.00 | 35.30 | 1.82 |
5685 | 6634 | 6.143758 | GCGATGTGAAAATAAAACTTCTGCAA | 59.856 | 34.615 | 0.00 | 0.00 | 0.00 | 4.08 |
5702 | 6651 | 4.991056 | TCTGCAATCTTAGCTATTTAGGCG | 59.009 | 41.667 | 0.00 | 0.00 | 34.52 | 5.52 |
5703 | 6652 | 3.498397 | TGCAATCTTAGCTATTTAGGCGC | 59.502 | 43.478 | 0.00 | 0.00 | 34.52 | 6.53 |
5704 | 6653 | 3.748568 | GCAATCTTAGCTATTTAGGCGCT | 59.251 | 43.478 | 7.64 | 0.00 | 37.77 | 5.92 |
5705 | 6654 | 4.377841 | GCAATCTTAGCTATTTAGGCGCTG | 60.378 | 45.833 | 7.64 | 0.00 | 35.33 | 5.18 |
5706 | 6655 | 4.608948 | ATCTTAGCTATTTAGGCGCTGT | 57.391 | 40.909 | 7.64 | 0.00 | 35.33 | 4.40 |
5707 | 6656 | 4.402056 | TCTTAGCTATTTAGGCGCTGTT | 57.598 | 40.909 | 7.64 | 0.00 | 35.33 | 3.16 |
5708 | 6657 | 4.369182 | TCTTAGCTATTTAGGCGCTGTTC | 58.631 | 43.478 | 7.64 | 0.00 | 35.33 | 3.18 |
5709 | 6658 | 1.571919 | AGCTATTTAGGCGCTGTTCG | 58.428 | 50.000 | 7.64 | 0.00 | 42.12 | 3.95 |
5710 | 6659 | 0.582005 | GCTATTTAGGCGCTGTTCGG | 59.418 | 55.000 | 7.64 | 0.00 | 38.94 | 4.30 |
5711 | 6660 | 1.935933 | CTATTTAGGCGCTGTTCGGT | 58.064 | 50.000 | 7.64 | 0.00 | 38.94 | 4.69 |
5712 | 6661 | 2.800629 | GCTATTTAGGCGCTGTTCGGTA | 60.801 | 50.000 | 7.64 | 0.00 | 38.94 | 4.02 |
5713 | 6662 | 2.614829 | ATTTAGGCGCTGTTCGGTAT | 57.385 | 45.000 | 7.64 | 0.00 | 38.94 | 2.73 |
5714 | 6663 | 1.930567 | TTTAGGCGCTGTTCGGTATC | 58.069 | 50.000 | 7.64 | 0.00 | 38.94 | 2.24 |
5715 | 6664 | 0.248743 | TTAGGCGCTGTTCGGTATCG | 60.249 | 55.000 | 7.64 | 0.00 | 38.94 | 2.92 |
5716 | 6665 | 2.672908 | TAGGCGCTGTTCGGTATCGC | 62.673 | 60.000 | 7.64 | 0.00 | 44.39 | 4.58 |
5717 | 6666 | 2.582498 | GCGCTGTTCGGTATCGCT | 60.582 | 61.111 | 0.00 | 0.00 | 42.19 | 4.93 |
5718 | 6667 | 2.577785 | GCGCTGTTCGGTATCGCTC | 61.578 | 63.158 | 0.00 | 0.00 | 42.19 | 5.03 |
5719 | 6668 | 1.944676 | CGCTGTTCGGTATCGCTCC | 60.945 | 63.158 | 0.00 | 0.00 | 36.13 | 4.70 |
5721 | 6670 | 1.944676 | CTGTTCGGTATCGCTCCGC | 60.945 | 63.158 | 7.64 | 0.00 | 46.49 | 5.54 |
5722 | 6671 | 2.337749 | CTGTTCGGTATCGCTCCGCT | 62.338 | 60.000 | 7.64 | 0.00 | 46.49 | 5.52 |
5723 | 6672 | 1.657794 | GTTCGGTATCGCTCCGCTC | 60.658 | 63.158 | 7.64 | 1.50 | 46.49 | 5.03 |
5724 | 6673 | 2.842256 | TTCGGTATCGCTCCGCTCC | 61.842 | 63.158 | 7.64 | 0.00 | 46.49 | 4.70 |
5725 | 6674 | 3.592814 | CGGTATCGCTCCGCTCCA | 61.593 | 66.667 | 0.00 | 0.00 | 41.48 | 3.86 |
5726 | 6675 | 2.027751 | GGTATCGCTCCGCTCCAC | 59.972 | 66.667 | 0.00 | 0.00 | 0.00 | 4.02 |
5727 | 6676 | 2.782222 | GGTATCGCTCCGCTCCACA | 61.782 | 63.158 | 0.00 | 0.00 | 0.00 | 4.17 |
5728 | 6677 | 1.141019 | GTATCGCTCCGCTCCACAA | 59.859 | 57.895 | 0.00 | 0.00 | 0.00 | 3.33 |
5729 | 6678 | 1.141019 | TATCGCTCCGCTCCACAAC | 59.859 | 57.895 | 0.00 | 0.00 | 0.00 | 3.32 |
5730 | 6679 | 1.320344 | TATCGCTCCGCTCCACAACT | 61.320 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
5731 | 6680 | 2.564553 | ATCGCTCCGCTCCACAACTC | 62.565 | 60.000 | 0.00 | 0.00 | 0.00 | 3.01 |
5732 | 6681 | 2.435059 | GCTCCGCTCCACAACTCC | 60.435 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
5733 | 6682 | 3.059982 | CTCCGCTCCACAACTCCA | 58.940 | 61.111 | 0.00 | 0.00 | 0.00 | 3.86 |
5734 | 6683 | 1.079543 | CTCCGCTCCACAACTCCAG | 60.080 | 63.158 | 0.00 | 0.00 | 0.00 | 3.86 |
5735 | 6684 | 2.046892 | CCGCTCCACAACTCCAGG | 60.047 | 66.667 | 0.00 | 0.00 | 0.00 | 4.45 |
5736 | 6685 | 2.583441 | CCGCTCCACAACTCCAGGA | 61.583 | 63.158 | 0.00 | 0.00 | 0.00 | 3.86 |
5739 | 6688 | 1.079543 | CTCCACAACTCCAGGAGCG | 60.080 | 63.158 | 17.31 | 10.59 | 42.13 | 5.03 |
5740 | 6689 | 2.046892 | CCACAACTCCAGGAGCGG | 60.047 | 66.667 | 17.31 | 11.23 | 32.04 | 5.52 |
5741 | 6690 | 2.583441 | CCACAACTCCAGGAGCGGA | 61.583 | 63.158 | 17.31 | 0.00 | 32.04 | 5.54 |
5746 | 6695 | 2.581354 | CTCCAGGAGCGGAGTTGG | 59.419 | 66.667 | 2.60 | 0.00 | 46.48 | 3.77 |
5747 | 6696 | 3.672295 | CTCCAGGAGCGGAGTTGGC | 62.672 | 68.421 | 2.60 | 0.00 | 46.48 | 4.52 |
5751 | 6700 | 4.821589 | GGAGCGGAGTTGGCGGAG | 62.822 | 72.222 | 0.00 | 0.00 | 35.00 | 4.63 |
5766 | 6715 | 1.973138 | CGGAGCTGCAGTTCAAAATG | 58.027 | 50.000 | 28.64 | 11.17 | 0.00 | 2.32 |
5767 | 6716 | 1.401931 | CGGAGCTGCAGTTCAAAATGG | 60.402 | 52.381 | 28.64 | 9.13 | 0.00 | 3.16 |
5768 | 6717 | 1.670967 | GGAGCTGCAGTTCAAAATGGC | 60.671 | 52.381 | 28.64 | 8.67 | 0.00 | 4.40 |
5769 | 6718 | 0.038892 | AGCTGCAGTTCAAAATGGCG | 60.039 | 50.000 | 16.64 | 0.00 | 0.00 | 5.69 |
5770 | 6719 | 1.010419 | GCTGCAGTTCAAAATGGCGG | 61.010 | 55.000 | 16.64 | 0.00 | 0.00 | 6.13 |
5771 | 6720 | 0.597568 | CTGCAGTTCAAAATGGCGGA | 59.402 | 50.000 | 5.25 | 0.00 | 32.69 | 5.54 |
5772 | 6721 | 0.597568 | TGCAGTTCAAAATGGCGGAG | 59.402 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
5773 | 6722 | 0.598065 | GCAGTTCAAAATGGCGGAGT | 59.402 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
5774 | 6723 | 1.000274 | GCAGTTCAAAATGGCGGAGTT | 60.000 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
5775 | 6724 | 2.664916 | CAGTTCAAAATGGCGGAGTTG | 58.335 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
5776 | 6725 | 1.000274 | AGTTCAAAATGGCGGAGTTGC | 60.000 | 47.619 | 0.00 | 0.00 | 0.00 | 4.17 |
5777 | 6726 | 1.035923 | TTCAAAATGGCGGAGTTGCA | 58.964 | 45.000 | 0.00 | 0.00 | 36.28 | 4.08 |
5778 | 6727 | 0.597568 | TCAAAATGGCGGAGTTGCAG | 59.402 | 50.000 | 0.00 | 0.00 | 36.28 | 4.41 |
5779 | 6728 | 0.314935 | CAAAATGGCGGAGTTGCAGT | 59.685 | 50.000 | 0.00 | 0.00 | 36.28 | 4.40 |
5780 | 6729 | 1.039856 | AAAATGGCGGAGTTGCAGTT | 58.960 | 45.000 | 0.00 | 0.00 | 36.28 | 3.16 |
5781 | 6730 | 1.039856 | AAATGGCGGAGTTGCAGTTT | 58.960 | 45.000 | 0.00 | 0.00 | 36.28 | 2.66 |
5782 | 6731 | 0.598065 | AATGGCGGAGTTGCAGTTTC | 59.402 | 50.000 | 0.00 | 0.00 | 36.28 | 2.78 |
5783 | 6732 | 1.244019 | ATGGCGGAGTTGCAGTTTCC | 61.244 | 55.000 | 3.77 | 3.77 | 36.28 | 3.13 |
5784 | 6733 | 2.626780 | GGCGGAGTTGCAGTTTCCC | 61.627 | 63.158 | 7.41 | 2.14 | 36.28 | 3.97 |
5785 | 6734 | 2.626780 | GCGGAGTTGCAGTTTCCCC | 61.627 | 63.158 | 7.41 | 0.00 | 34.15 | 4.81 |
5786 | 6735 | 1.971695 | CGGAGTTGCAGTTTCCCCC | 60.972 | 63.158 | 7.41 | 0.00 | 0.00 | 5.40 |
5787 | 6736 | 1.460699 | GGAGTTGCAGTTTCCCCCT | 59.539 | 57.895 | 2.67 | 0.00 | 0.00 | 4.79 |
5788 | 6737 | 0.609406 | GGAGTTGCAGTTTCCCCCTC | 60.609 | 60.000 | 2.67 | 0.00 | 0.00 | 4.30 |
5789 | 6738 | 0.609406 | GAGTTGCAGTTTCCCCCTCC | 60.609 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5790 | 6739 | 1.971695 | GTTGCAGTTTCCCCCTCCG | 60.972 | 63.158 | 0.00 | 0.00 | 0.00 | 4.63 |
5791 | 6740 | 3.860930 | TTGCAGTTTCCCCCTCCGC | 62.861 | 63.158 | 0.00 | 0.00 | 0.00 | 5.54 |
5792 | 6741 | 4.344865 | GCAGTTTCCCCCTCCGCA | 62.345 | 66.667 | 0.00 | 0.00 | 0.00 | 5.69 |
5793 | 6742 | 2.045926 | CAGTTTCCCCCTCCGCAG | 60.046 | 66.667 | 0.00 | 0.00 | 0.00 | 5.18 |
5794 | 6743 | 2.203938 | AGTTTCCCCCTCCGCAGA | 60.204 | 61.111 | 0.00 | 0.00 | 0.00 | 4.26 |
5795 | 6744 | 1.616628 | AGTTTCCCCCTCCGCAGAT | 60.617 | 57.895 | 0.00 | 0.00 | 0.00 | 2.90 |
5796 | 6745 | 1.208165 | AGTTTCCCCCTCCGCAGATT | 61.208 | 55.000 | 0.00 | 0.00 | 0.00 | 2.40 |
5797 | 6746 | 0.748367 | GTTTCCCCCTCCGCAGATTC | 60.748 | 60.000 | 0.00 | 0.00 | 0.00 | 2.52 |
5798 | 6747 | 1.921869 | TTTCCCCCTCCGCAGATTCC | 61.922 | 60.000 | 0.00 | 0.00 | 0.00 | 3.01 |
5799 | 6748 | 4.241555 | CCCCCTCCGCAGATTCCG | 62.242 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
5800 | 6749 | 4.241555 | CCCCTCCGCAGATTCCGG | 62.242 | 72.222 | 0.00 | 0.00 | 46.88 | 5.14 |
5801 | 6750 | 4.241555 | CCCTCCGCAGATTCCGGG | 62.242 | 72.222 | 0.00 | 0.00 | 45.60 | 5.73 |
5802 | 6751 | 3.154473 | CCTCCGCAGATTCCGGGA | 61.154 | 66.667 | 0.00 | 0.00 | 45.60 | 5.14 |
5803 | 6752 | 2.419198 | CTCCGCAGATTCCGGGAG | 59.581 | 66.667 | 0.00 | 0.00 | 45.60 | 4.30 |
5804 | 6753 | 2.363795 | TCCGCAGATTCCGGGAGT | 60.364 | 61.111 | 0.00 | 0.00 | 45.60 | 3.85 |
5805 | 6754 | 2.202932 | CCGCAGATTCCGGGAGTG | 60.203 | 66.667 | 0.00 | 0.00 | 41.99 | 3.51 |
5806 | 6755 | 2.202932 | CGCAGATTCCGGGAGTGG | 60.203 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
5807 | 6756 | 2.190578 | GCAGATTCCGGGAGTGGG | 59.809 | 66.667 | 0.00 | 0.00 | 0.00 | 4.61 |
5808 | 6757 | 2.670148 | GCAGATTCCGGGAGTGGGT | 61.670 | 63.158 | 0.00 | 0.00 | 0.00 | 4.51 |
5809 | 6758 | 1.335132 | GCAGATTCCGGGAGTGGGTA | 61.335 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
5810 | 6759 | 1.200519 | CAGATTCCGGGAGTGGGTAA | 58.799 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
5811 | 6760 | 1.768870 | CAGATTCCGGGAGTGGGTAAT | 59.231 | 52.381 | 0.00 | 0.00 | 0.00 | 1.89 |
5812 | 6761 | 2.172717 | CAGATTCCGGGAGTGGGTAATT | 59.827 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
5813 | 6762 | 3.389983 | CAGATTCCGGGAGTGGGTAATTA | 59.610 | 47.826 | 0.00 | 0.00 | 0.00 | 1.40 |
5814 | 6763 | 3.390311 | AGATTCCGGGAGTGGGTAATTAC | 59.610 | 47.826 | 7.09 | 7.09 | 0.00 | 1.89 |
5815 | 6764 | 1.499368 | TCCGGGAGTGGGTAATTACC | 58.501 | 55.000 | 24.19 | 24.19 | 45.71 | 2.85 |
5825 | 6774 | 1.671979 | GGTAATTACCGAACAGGGCC | 58.328 | 55.000 | 18.70 | 0.00 | 46.96 | 5.80 |
5826 | 6775 | 1.211212 | GGTAATTACCGAACAGGGCCT | 59.789 | 52.381 | 18.70 | 0.00 | 46.96 | 5.19 |
5827 | 6776 | 2.356432 | GGTAATTACCGAACAGGGCCTT | 60.356 | 50.000 | 18.70 | 0.00 | 46.96 | 4.35 |
5828 | 6777 | 3.118298 | GGTAATTACCGAACAGGGCCTTA | 60.118 | 47.826 | 18.70 | 0.00 | 46.96 | 2.69 |
5829 | 6778 | 3.724732 | AATTACCGAACAGGGCCTTAA | 57.275 | 42.857 | 1.32 | 0.00 | 46.96 | 1.85 |
5830 | 6779 | 2.773993 | TTACCGAACAGGGCCTTAAG | 57.226 | 50.000 | 1.32 | 0.00 | 46.96 | 1.85 |
5831 | 6780 | 1.941377 | TACCGAACAGGGCCTTAAGA | 58.059 | 50.000 | 1.32 | 0.00 | 46.96 | 2.10 |
5896 | 6851 | 7.873505 | AGGGAAATAATAGCTCGTACATCTTTC | 59.126 | 37.037 | 0.00 | 0.00 | 0.00 | 2.62 |
5948 | 6903 | 1.202927 | ACAGCCAAAGGTGCAGTATGT | 60.203 | 47.619 | 0.00 | 0.00 | 45.66 | 2.29 |
6003 | 6967 | 2.094182 | TGCGAAGACCTAGAACCATCAC | 60.094 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
6067 | 7032 | 2.297597 | CTGTAGCCTGTAGGGAGCATAC | 59.702 | 54.545 | 0.00 | 0.00 | 37.23 | 2.39 |
6068 | 7033 | 2.091278 | TGTAGCCTGTAGGGAGCATACT | 60.091 | 50.000 | 0.00 | 0.00 | 37.23 | 2.12 |
6069 | 7034 | 3.139584 | TGTAGCCTGTAGGGAGCATACTA | 59.860 | 47.826 | 0.00 | 0.00 | 37.23 | 1.82 |
6126 | 7092 | 0.034574 | TGCAGTTGTGGTTCTGTGGT | 60.035 | 50.000 | 0.00 | 0.00 | 34.57 | 4.16 |
6140 | 7106 | 4.672587 | TCTGTGGTATTGATGTCCTAGC | 57.327 | 45.455 | 0.00 | 0.00 | 0.00 | 3.42 |
6159 | 7125 | 1.375908 | AGTACCTGCATGTGCCGTG | 60.376 | 57.895 | 4.73 | 0.00 | 41.18 | 4.94 |
6176 | 7148 | 3.251571 | CCGTGGAAGTTACTAGCTCAAC | 58.748 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
6178 | 7153 | 3.251571 | GTGGAAGTTACTAGCTCAACCG | 58.748 | 50.000 | 0.00 | 0.00 | 0.00 | 4.44 |
6197 | 7172 | 0.249447 | GTGCTGTTTCCTGTTTGCCC | 60.249 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
6288 | 7263 | 2.360165 | CCAGGATTTTGAGCTGTATGCC | 59.640 | 50.000 | 0.00 | 0.00 | 44.23 | 4.40 |
6353 | 7689 | 2.293677 | TACAGTTCAGCGATGCGATT | 57.706 | 45.000 | 0.00 | 0.00 | 0.00 | 3.34 |
6383 | 7720 | 8.194104 | GCATCATCTATAGTAATACTGTCCTGG | 58.806 | 40.741 | 2.68 | 0.00 | 0.00 | 4.45 |
6389 | 7726 | 9.736414 | TCTATAGTAATACTGTCCTGGTGTATC | 57.264 | 37.037 | 2.68 | 0.00 | 0.00 | 2.24 |
6436 | 7773 | 2.559785 | CTTGCAGACCCAAGCGATT | 58.440 | 52.632 | 0.00 | 0.00 | 36.18 | 3.34 |
6483 | 7820 | 3.706594 | TGGATCAGGGATCTACAAGACAC | 59.293 | 47.826 | 6.22 | 0.00 | 38.91 | 3.67 |
6485 | 7822 | 4.442192 | GGATCAGGGATCTACAAGACACAC | 60.442 | 50.000 | 6.22 | 0.00 | 38.91 | 3.82 |
6496 | 7833 | 6.993079 | TCTACAAGACACACTGTTCATACAT | 58.007 | 36.000 | 0.00 | 0.00 | 32.86 | 2.29 |
6598 | 7936 | 7.253651 | CGAAATCTTTCATGATTCATGTGCTTG | 60.254 | 37.037 | 22.64 | 11.82 | 41.98 | 4.01 |
6775 | 9598 | 0.598419 | GTCGATGCTGCGATCCATCA | 60.598 | 55.000 | 9.45 | 1.64 | 42.82 | 3.07 |
6801 | 9624 | 8.677300 | AGGCGCCATTTCTTATTTATATGTATG | 58.323 | 33.333 | 31.54 | 0.00 | 0.00 | 2.39 |
6961 | 9798 | 9.904198 | TTCATGATGTAATTTGGATCTAGACAA | 57.096 | 29.630 | 0.00 | 0.00 | 0.00 | 3.18 |
6962 | 9799 | 9.904198 | TCATGATGTAATTTGGATCTAGACAAA | 57.096 | 29.630 | 10.06 | 10.06 | 40.44 | 2.83 |
6965 | 9802 | 9.685276 | TGATGTAATTTGGATCTAGACAAATGT | 57.315 | 29.630 | 17.44 | 11.97 | 44.11 | 2.71 |
6971 | 9808 | 9.739276 | AATTTGGATCTAGACAAATGTAAGACA | 57.261 | 29.630 | 17.44 | 0.00 | 44.11 | 3.41 |
6972 | 9809 | 9.739276 | ATTTGGATCTAGACAAATGTAAGACAA | 57.261 | 29.630 | 16.47 | 1.13 | 43.47 | 3.18 |
6973 | 9810 | 8.777865 | TTGGATCTAGACAAATGTAAGACAAG | 57.222 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
6976 | 9992 | 9.871238 | GGATCTAGACAAATGTAAGACAAGTAA | 57.129 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
6985 | 10001 | 6.737254 | ATGTAAGACAAGTAATTTGGGACG | 57.263 | 37.500 | 0.00 | 0.00 | 41.25 | 4.79 |
6990 | 10006 | 4.225267 | AGACAAGTAATTTGGGACGGAGAT | 59.775 | 41.667 | 0.00 | 0.00 | 41.25 | 2.75 |
6992 | 10008 | 6.057321 | ACAAGTAATTTGGGACGGAGATAA | 57.943 | 37.500 | 0.00 | 0.00 | 41.25 | 1.75 |
6997 | 10013 | 9.862149 | AAGTAATTTGGGACGGAGATAATATTT | 57.138 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
7020 | 10044 | 7.962995 | TTAATATTGTAACTGGAATTGGGCA | 57.037 | 32.000 | 0.00 | 0.00 | 0.00 | 5.36 |
7024 | 10048 | 4.584638 | TGTAACTGGAATTGGGCATACT | 57.415 | 40.909 | 0.00 | 0.00 | 0.00 | 2.12 |
7053 | 10077 | 5.280317 | GGAATTACTTCCCTGTGTTGGTCTA | 60.280 | 44.000 | 0.28 | 0.00 | 44.56 | 2.59 |
7055 | 10079 | 7.365295 | GGAATTACTTCCCTGTGTTGGTCTATA | 60.365 | 40.741 | 0.28 | 0.00 | 44.56 | 1.31 |
7061 | 10085 | 5.274015 | TCCCTGTGTTGGTCTATACATACA | 58.726 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
7079 | 10103 | 7.364522 | ACATACATGTCAAAGTACACATCAC | 57.635 | 36.000 | 0.00 | 0.00 | 35.87 | 3.06 |
7092 | 10116 | 4.207891 | ACACATCACAGTTGGAGGATAC | 57.792 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
7104 | 10128 | 1.697982 | GGAGGATACGGCAAGGGTTAT | 59.302 | 52.381 | 0.00 | 0.00 | 46.39 | 1.89 |
7127 | 10151 | 2.897271 | TATCCAACATGGTTGGCAGT | 57.103 | 45.000 | 20.52 | 12.45 | 39.03 | 4.40 |
7128 | 10152 | 1.259609 | ATCCAACATGGTTGGCAGTG | 58.740 | 50.000 | 20.52 | 0.51 | 39.03 | 3.66 |
7134 | 10158 | 0.813184 | CATGGTTGGCAGTGTGATCC | 59.187 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
7135 | 10159 | 0.700564 | ATGGTTGGCAGTGTGATCCT | 59.299 | 50.000 | 0.00 | 0.00 | 0.00 | 3.24 |
7259 | 10297 | 1.754803 | CAGAGGTCCGGTGTAATGCTA | 59.245 | 52.381 | 0.00 | 0.00 | 0.00 | 3.49 |
7263 | 10301 | 2.167900 | AGGTCCGGTGTAATGCTAGAAC | 59.832 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
7276 | 10314 | 9.764363 | TGTAATGCTAGAACCTATTGAGTAATG | 57.236 | 33.333 | 0.00 | 0.00 | 0.00 | 1.90 |
7288 | 10328 | 6.309980 | CCTATTGAGTAATGAAGCGCTCTATG | 59.690 | 42.308 | 12.06 | 0.00 | 0.00 | 2.23 |
7290 | 10330 | 3.636764 | TGAGTAATGAAGCGCTCTATGGA | 59.363 | 43.478 | 12.06 | 0.00 | 0.00 | 3.41 |
7306 | 10346 | 6.350445 | GCTCTATGGAAAAAGCCTCATGAAAA | 60.350 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
7315 | 10355 | 2.818432 | AGCCTCATGAAAACTTGCTGAG | 59.182 | 45.455 | 0.00 | 0.00 | 34.48 | 3.35 |
7316 | 10356 | 2.816087 | GCCTCATGAAAACTTGCTGAGA | 59.184 | 45.455 | 0.00 | 0.00 | 36.32 | 3.27 |
7318 | 10358 | 4.082354 | GCCTCATGAAAACTTGCTGAGAAT | 60.082 | 41.667 | 0.00 | 0.00 | 36.32 | 2.40 |
7321 | 10361 | 6.365247 | CCTCATGAAAACTTGCTGAGAATTTG | 59.635 | 38.462 | 0.00 | 0.00 | 36.32 | 2.32 |
7323 | 10363 | 7.490840 | TCATGAAAACTTGCTGAGAATTTGAA | 58.509 | 30.769 | 0.00 | 0.00 | 0.00 | 2.69 |
7324 | 10364 | 7.650504 | TCATGAAAACTTGCTGAGAATTTGAAG | 59.349 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
7377 | 10419 | 6.682113 | GCATGCATGAGTGTCCAATCTTAATT | 60.682 | 38.462 | 30.64 | 0.00 | 0.00 | 1.40 |
7381 | 10423 | 6.623486 | CATGAGTGTCCAATCTTAATTGCAA | 58.377 | 36.000 | 0.00 | 0.00 | 40.85 | 4.08 |
7383 | 10425 | 5.048083 | TGAGTGTCCAATCTTAATTGCAACC | 60.048 | 40.000 | 0.00 | 0.00 | 40.85 | 3.77 |
7391 | 10433 | 9.249053 | TCCAATCTTAATTGCAACCTGTTAATA | 57.751 | 29.630 | 0.00 | 0.00 | 40.85 | 0.98 |
7416 | 10461 | 2.268762 | TTGCATAGCACAACAGGTCA | 57.731 | 45.000 | 0.00 | 0.00 | 38.71 | 4.02 |
7421 | 10466 | 0.317160 | TAGCACAACAGGTCAGTCCG | 59.683 | 55.000 | 0.00 | 0.00 | 41.99 | 4.79 |
7429 | 10474 | 0.813610 | CAGGTCAGTCCGTGTGCAAA | 60.814 | 55.000 | 0.00 | 0.00 | 41.99 | 3.68 |
7435 | 10480 | 1.400142 | CAGTCCGTGTGCAAAACTTGA | 59.600 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
7436 | 10481 | 2.088423 | AGTCCGTGTGCAAAACTTGAA | 58.912 | 42.857 | 0.00 | 0.00 | 0.00 | 2.69 |
7437 | 10482 | 2.687935 | AGTCCGTGTGCAAAACTTGAAT | 59.312 | 40.909 | 0.00 | 0.00 | 0.00 | 2.57 |
7438 | 10483 | 2.788786 | GTCCGTGTGCAAAACTTGAATG | 59.211 | 45.455 | 0.00 | 0.00 | 0.00 | 2.67 |
7439 | 10484 | 2.425312 | TCCGTGTGCAAAACTTGAATGT | 59.575 | 40.909 | 0.00 | 0.00 | 0.00 | 2.71 |
7440 | 10485 | 3.628032 | TCCGTGTGCAAAACTTGAATGTA | 59.372 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
7441 | 10486 | 4.096532 | TCCGTGTGCAAAACTTGAATGTAA | 59.903 | 37.500 | 0.00 | 0.00 | 0.00 | 2.41 |
7442 | 10487 | 4.440758 | CCGTGTGCAAAACTTGAATGTAAG | 59.559 | 41.667 | 0.00 | 0.00 | 0.00 | 2.34 |
7443 | 10488 | 5.270083 | CGTGTGCAAAACTTGAATGTAAGA | 58.730 | 37.500 | 0.00 | 0.00 | 0.00 | 2.10 |
7444 | 10489 | 5.396362 | CGTGTGCAAAACTTGAATGTAAGAG | 59.604 | 40.000 | 0.00 | 0.00 | 0.00 | 2.85 |
7445 | 10490 | 5.173854 | GTGTGCAAAACTTGAATGTAAGAGC | 59.826 | 40.000 | 0.00 | 0.00 | 0.00 | 4.09 |
7446 | 10491 | 5.163571 | TGTGCAAAACTTGAATGTAAGAGCA | 60.164 | 36.000 | 0.00 | 0.00 | 0.00 | 4.26 |
7447 | 10492 | 5.748152 | GTGCAAAACTTGAATGTAAGAGCAA | 59.252 | 36.000 | 0.00 | 0.00 | 32.03 | 3.91 |
7448 | 10493 | 5.748152 | TGCAAAACTTGAATGTAAGAGCAAC | 59.252 | 36.000 | 0.00 | 0.00 | 0.00 | 4.17 |
7449 | 10494 | 5.979517 | GCAAAACTTGAATGTAAGAGCAACT | 59.020 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
7450 | 10495 | 6.142958 | GCAAAACTTGAATGTAAGAGCAACTC | 59.857 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
7451 | 10496 | 5.948992 | AACTTGAATGTAAGAGCAACTCC | 57.051 | 39.130 | 0.00 | 0.00 | 0.00 | 3.85 |
7452 | 10497 | 4.973168 | ACTTGAATGTAAGAGCAACTCCA | 58.027 | 39.130 | 0.00 | 0.00 | 0.00 | 3.86 |
7453 | 10498 | 5.376625 | ACTTGAATGTAAGAGCAACTCCAA | 58.623 | 37.500 | 0.00 | 0.00 | 0.00 | 3.53 |
7454 | 10499 | 5.239525 | ACTTGAATGTAAGAGCAACTCCAAC | 59.760 | 40.000 | 0.00 | 0.00 | 0.00 | 3.77 |
7455 | 10500 | 4.713553 | TGAATGTAAGAGCAACTCCAACA | 58.286 | 39.130 | 3.09 | 3.09 | 32.74 | 3.33 |
7456 | 10501 | 4.756642 | TGAATGTAAGAGCAACTCCAACAG | 59.243 | 41.667 | 6.01 | 0.00 | 32.08 | 3.16 |
7457 | 10502 | 3.126001 | TGTAAGAGCAACTCCAACAGG | 57.874 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
7458 | 10503 | 2.224523 | TGTAAGAGCAACTCCAACAGGG | 60.225 | 50.000 | 0.00 | 0.00 | 38.37 | 4.45 |
7459 | 10504 | 0.538287 | AAGAGCAACTCCAACAGGGC | 60.538 | 55.000 | 0.00 | 0.00 | 36.21 | 5.19 |
7460 | 10505 | 1.973812 | GAGCAACTCCAACAGGGCC | 60.974 | 63.158 | 0.00 | 0.00 | 36.21 | 5.80 |
7461 | 10506 | 2.203480 | GCAACTCCAACAGGGCCA | 60.203 | 61.111 | 6.18 | 0.00 | 36.21 | 5.36 |
7462 | 10507 | 2.564721 | GCAACTCCAACAGGGCCAC | 61.565 | 63.158 | 6.18 | 0.00 | 36.21 | 5.01 |
7463 | 10508 | 1.903404 | CAACTCCAACAGGGCCACC | 60.903 | 63.158 | 6.18 | 0.00 | 36.21 | 4.61 |
7464 | 10509 | 3.146828 | AACTCCAACAGGGCCACCC | 62.147 | 63.158 | 6.18 | 0.00 | 45.90 | 4.61 |
7473 | 10518 | 2.754254 | GGGCCACCCATTTCGTCC | 60.754 | 66.667 | 4.39 | 0.00 | 44.65 | 4.79 |
7474 | 10519 | 3.131478 | GGCCACCCATTTCGTCCG | 61.131 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
7475 | 10520 | 3.810896 | GCCACCCATTTCGTCCGC | 61.811 | 66.667 | 0.00 | 0.00 | 0.00 | 5.54 |
7476 | 10521 | 2.046314 | CCACCCATTTCGTCCGCT | 60.046 | 61.111 | 0.00 | 0.00 | 0.00 | 5.52 |
7477 | 10522 | 2.398554 | CCACCCATTTCGTCCGCTG | 61.399 | 63.158 | 0.00 | 0.00 | 0.00 | 5.18 |
7478 | 10523 | 2.046314 | ACCCATTTCGTCCGCTGG | 60.046 | 61.111 | 0.00 | 0.00 | 0.00 | 4.85 |
7479 | 10524 | 3.508840 | CCCATTTCGTCCGCTGGC | 61.509 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
7480 | 10525 | 3.864686 | CCATTTCGTCCGCTGGCG | 61.865 | 66.667 | 8.08 | 8.08 | 39.44 | 5.69 |
7481 | 10526 | 3.118454 | CATTTCGTCCGCTGGCGT | 61.118 | 61.111 | 13.84 | 0.00 | 37.81 | 5.68 |
7482 | 10527 | 2.813908 | ATTTCGTCCGCTGGCGTC | 60.814 | 61.111 | 13.84 | 5.90 | 37.81 | 5.19 |
7492 | 10537 | 3.047877 | CTGGCGTCCGTTTGGGTC | 61.048 | 66.667 | 0.00 | 0.00 | 37.00 | 4.46 |
7507 | 10552 | 3.641986 | GTCGGCGCGGACACAAAA | 61.642 | 61.111 | 34.74 | 4.76 | 36.91 | 2.44 |
7508 | 10553 | 3.342627 | TCGGCGCGGACACAAAAG | 61.343 | 61.111 | 14.27 | 0.00 | 0.00 | 2.27 |
7509 | 10554 | 3.645975 | CGGCGCGGACACAAAAGT | 61.646 | 61.111 | 9.72 | 0.00 | 0.00 | 2.66 |
7510 | 10555 | 2.251371 | GGCGCGGACACAAAAGTC | 59.749 | 61.111 | 8.83 | 0.00 | 37.80 | 3.01 |
7511 | 10556 | 2.127758 | GCGCGGACACAAAAGTCG | 60.128 | 61.111 | 8.83 | 0.00 | 39.42 | 4.18 |
7512 | 10557 | 2.549282 | CGCGGACACAAAAGTCGG | 59.451 | 61.111 | 0.00 | 0.00 | 39.42 | 4.79 |
7514 | 10559 | 2.943653 | CGGACACAAAAGTCGGCC | 59.056 | 61.111 | 0.00 | 0.00 | 39.42 | 6.13 |
7515 | 10560 | 2.613506 | CGGACACAAAAGTCGGCCC | 61.614 | 63.158 | 0.00 | 0.00 | 39.42 | 5.80 |
7516 | 10561 | 1.527380 | GGACACAAAAGTCGGCCCA | 60.527 | 57.895 | 0.00 | 0.00 | 39.42 | 5.36 |
7517 | 10562 | 1.104577 | GGACACAAAAGTCGGCCCAA | 61.105 | 55.000 | 0.00 | 0.00 | 39.42 | 4.12 |
7518 | 10563 | 0.030235 | GACACAAAAGTCGGCCCAAC | 59.970 | 55.000 | 0.00 | 0.00 | 0.00 | 3.77 |
7519 | 10564 | 1.008995 | CACAAAAGTCGGCCCAACG | 60.009 | 57.895 | 0.00 | 0.00 | 0.00 | 4.10 |
7520 | 10565 | 2.050442 | CAAAAGTCGGCCCAACGC | 60.050 | 61.111 | 0.00 | 0.00 | 0.00 | 4.84 |
7521 | 10566 | 3.656045 | AAAAGTCGGCCCAACGCG | 61.656 | 61.111 | 3.53 | 3.53 | 38.94 | 6.01 |
7531 | 10576 | 3.955101 | CCAACGCGCCGACCAAAA | 61.955 | 61.111 | 5.73 | 0.00 | 0.00 | 2.44 |
7532 | 10577 | 2.724358 | CAACGCGCCGACCAAAAC | 60.724 | 61.111 | 5.73 | 0.00 | 0.00 | 2.43 |
7533 | 10578 | 4.302172 | AACGCGCCGACCAAAACG | 62.302 | 61.111 | 5.73 | 0.00 | 0.00 | 3.60 |
7540 | 10585 | 2.247267 | CGACCAAAACGGACGCAC | 59.753 | 61.111 | 0.00 | 0.00 | 45.59 | 5.34 |
7541 | 10586 | 2.247267 | GACCAAAACGGACGCACG | 59.753 | 61.111 | 0.00 | 0.00 | 38.63 | 5.34 |
7551 | 10596 | 3.764049 | GACGCACGTCCGCTTGTC | 61.764 | 66.667 | 12.04 | 0.00 | 39.08 | 3.18 |
7554 | 10599 | 3.764049 | GCACGTCCGCTTGTCGTC | 61.764 | 66.667 | 0.00 | 0.00 | 35.62 | 4.20 |
7555 | 10600 | 3.103911 | CACGTCCGCTTGTCGTCC | 61.104 | 66.667 | 0.00 | 0.00 | 35.62 | 4.79 |
7556 | 10601 | 3.598715 | ACGTCCGCTTGTCGTCCA | 61.599 | 61.111 | 0.00 | 0.00 | 36.19 | 4.02 |
7557 | 10602 | 3.103911 | CGTCCGCTTGTCGTCCAC | 61.104 | 66.667 | 0.00 | 0.00 | 36.19 | 4.02 |
7558 | 10603 | 2.737376 | GTCCGCTTGTCGTCCACC | 60.737 | 66.667 | 0.00 | 0.00 | 36.19 | 4.61 |
7559 | 10604 | 2.915659 | TCCGCTTGTCGTCCACCT | 60.916 | 61.111 | 0.00 | 0.00 | 36.19 | 4.00 |
7560 | 10605 | 2.738521 | CCGCTTGTCGTCCACCTG | 60.739 | 66.667 | 0.00 | 0.00 | 36.19 | 4.00 |
7561 | 10606 | 3.414700 | CGCTTGTCGTCCACCTGC | 61.415 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
7562 | 10607 | 3.050275 | GCTTGTCGTCCACCTGCC | 61.050 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
7563 | 10608 | 2.425592 | CTTGTCGTCCACCTGCCA | 59.574 | 61.111 | 0.00 | 0.00 | 0.00 | 4.92 |
7564 | 10609 | 1.227823 | CTTGTCGTCCACCTGCCAA | 60.228 | 57.895 | 0.00 | 0.00 | 0.00 | 4.52 |
7565 | 10610 | 1.507141 | CTTGTCGTCCACCTGCCAAC | 61.507 | 60.000 | 0.00 | 0.00 | 0.00 | 3.77 |
7566 | 10611 | 2.668550 | GTCGTCCACCTGCCAACC | 60.669 | 66.667 | 0.00 | 0.00 | 0.00 | 3.77 |
7567 | 10612 | 3.948719 | TCGTCCACCTGCCAACCC | 61.949 | 66.667 | 0.00 | 0.00 | 0.00 | 4.11 |
7568 | 10613 | 4.263572 | CGTCCACCTGCCAACCCA | 62.264 | 66.667 | 0.00 | 0.00 | 0.00 | 4.51 |
7569 | 10614 | 2.440599 | GTCCACCTGCCAACCCAT | 59.559 | 61.111 | 0.00 | 0.00 | 0.00 | 4.00 |
7570 | 10615 | 1.228862 | GTCCACCTGCCAACCCATT | 60.229 | 57.895 | 0.00 | 0.00 | 0.00 | 3.16 |
7571 | 10616 | 0.831711 | GTCCACCTGCCAACCCATTT | 60.832 | 55.000 | 0.00 | 0.00 | 0.00 | 2.32 |
7572 | 10617 | 0.541764 | TCCACCTGCCAACCCATTTC | 60.542 | 55.000 | 0.00 | 0.00 | 0.00 | 2.17 |
7573 | 10618 | 1.543944 | CCACCTGCCAACCCATTTCC | 61.544 | 60.000 | 0.00 | 0.00 | 0.00 | 3.13 |
7574 | 10619 | 1.606313 | ACCTGCCAACCCATTTCCG | 60.606 | 57.895 | 0.00 | 0.00 | 0.00 | 4.30 |
7575 | 10620 | 2.350458 | CCTGCCAACCCATTTCCGG | 61.350 | 63.158 | 0.00 | 0.00 | 0.00 | 5.14 |
7576 | 10621 | 2.994417 | TGCCAACCCATTTCCGGC | 60.994 | 61.111 | 0.00 | 0.00 | 43.28 | 6.13 |
7577 | 10622 | 3.770040 | GCCAACCCATTTCCGGCC | 61.770 | 66.667 | 0.00 | 0.00 | 36.73 | 6.13 |
7578 | 10623 | 3.074369 | CCAACCCATTTCCGGCCC | 61.074 | 66.667 | 0.00 | 0.00 | 0.00 | 5.80 |
7579 | 10624 | 2.283532 | CAACCCATTTCCGGCCCA | 60.284 | 61.111 | 0.00 | 0.00 | 0.00 | 5.36 |
7580 | 10625 | 1.685421 | CAACCCATTTCCGGCCCAT | 60.685 | 57.895 | 0.00 | 0.00 | 0.00 | 4.00 |
7581 | 10626 | 1.080170 | AACCCATTTCCGGCCCATT | 59.920 | 52.632 | 0.00 | 0.00 | 0.00 | 3.16 |
7582 | 10627 | 0.546507 | AACCCATTTCCGGCCCATTT | 60.547 | 50.000 | 0.00 | 0.00 | 0.00 | 2.32 |
7583 | 10628 | 0.546507 | ACCCATTTCCGGCCCATTTT | 60.547 | 50.000 | 0.00 | 0.00 | 0.00 | 1.82 |
7584 | 10629 | 0.617935 | CCCATTTCCGGCCCATTTTT | 59.382 | 50.000 | 0.00 | 0.00 | 0.00 | 1.94 |
7585 | 10630 | 1.678425 | CCCATTTCCGGCCCATTTTTG | 60.678 | 52.381 | 0.00 | 0.00 | 0.00 | 2.44 |
7586 | 10631 | 1.277557 | CCATTTCCGGCCCATTTTTGA | 59.722 | 47.619 | 0.00 | 0.00 | 0.00 | 2.69 |
7587 | 10632 | 2.620242 | CATTTCCGGCCCATTTTTGAG | 58.380 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
7588 | 10633 | 0.320050 | TTTCCGGCCCATTTTTGAGC | 59.680 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
7589 | 10634 | 1.540435 | TTCCGGCCCATTTTTGAGCC | 61.540 | 55.000 | 0.00 | 0.00 | 42.18 | 4.70 |
7591 | 10636 | 2.578664 | GGCCCATTTTTGAGCCGG | 59.421 | 61.111 | 0.00 | 0.00 | 35.30 | 6.13 |
7592 | 10637 | 1.981853 | GGCCCATTTTTGAGCCGGA | 60.982 | 57.895 | 5.05 | 0.00 | 35.30 | 5.14 |
7593 | 10638 | 1.329913 | GGCCCATTTTTGAGCCGGAT | 61.330 | 55.000 | 5.05 | 0.00 | 35.30 | 4.18 |
7594 | 10639 | 0.536724 | GCCCATTTTTGAGCCGGATT | 59.463 | 50.000 | 5.05 | 0.00 | 0.00 | 3.01 |
7595 | 10640 | 1.066215 | GCCCATTTTTGAGCCGGATTT | 60.066 | 47.619 | 5.05 | 0.00 | 0.00 | 2.17 |
7596 | 10641 | 2.620242 | CCCATTTTTGAGCCGGATTTG | 58.380 | 47.619 | 5.05 | 0.00 | 0.00 | 2.32 |
7597 | 10642 | 2.001872 | CCATTTTTGAGCCGGATTTGC | 58.998 | 47.619 | 5.05 | 0.00 | 0.00 | 3.68 |
7598 | 10643 | 1.655099 | CATTTTTGAGCCGGATTTGCG | 59.345 | 47.619 | 5.05 | 0.00 | 0.00 | 4.85 |
7599 | 10644 | 0.671251 | TTTTTGAGCCGGATTTGCGT | 59.329 | 45.000 | 5.05 | 0.00 | 0.00 | 5.24 |
7600 | 10645 | 0.239879 | TTTTGAGCCGGATTTGCGTC | 59.760 | 50.000 | 5.05 | 0.00 | 0.00 | 5.19 |
7601 | 10646 | 1.906994 | TTTGAGCCGGATTTGCGTCG | 61.907 | 55.000 | 5.05 | 0.00 | 0.00 | 5.12 |
7602 | 10647 | 3.564027 | GAGCCGGATTTGCGTCGG | 61.564 | 66.667 | 5.05 | 0.00 | 45.84 | 4.79 |
7614 | 10659 | 2.880879 | CGTCGGCATGGACACGAG | 60.881 | 66.667 | 0.00 | 0.00 | 37.30 | 4.18 |
7615 | 10660 | 2.509336 | GTCGGCATGGACACGAGG | 60.509 | 66.667 | 0.00 | 0.00 | 37.30 | 4.63 |
7616 | 10661 | 4.451150 | TCGGCATGGACACGAGGC | 62.451 | 66.667 | 0.00 | 0.00 | 32.29 | 4.70 |
7619 | 10664 | 4.451150 | GCATGGACACGAGGCGGA | 62.451 | 66.667 | 0.00 | 0.00 | 0.00 | 5.54 |
7620 | 10665 | 2.509336 | CATGGACACGAGGCGGAC | 60.509 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
7621 | 10666 | 4.129737 | ATGGACACGAGGCGGACG | 62.130 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
7642 | 10687 | 3.491652 | GCGCGCACCTTCTCCTTC | 61.492 | 66.667 | 29.10 | 0.00 | 0.00 | 3.46 |
7643 | 10688 | 2.815647 | CGCGCACCTTCTCCTTCC | 60.816 | 66.667 | 8.75 | 0.00 | 0.00 | 3.46 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
20 | 21 | 0.402272 | ACTCCCACCAACCAGGGTAA | 60.402 | 55.000 | 0.00 | 0.00 | 45.64 | 2.85 |
44 | 45 | 1.828595 | TGGATTGGAATCGTCGGAGAA | 59.171 | 47.619 | 0.00 | 0.00 | 36.27 | 2.87 |
87 | 89 | 1.457346 | CCACAGAGAATGCCCAAGAC | 58.543 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
92 | 94 | 0.743097 | GAATGCCACAGAGAATGCCC | 59.257 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
96 | 98 | 3.996921 | AGACAGAATGCCACAGAGAAT | 57.003 | 42.857 | 0.00 | 0.00 | 42.53 | 2.40 |
198 | 200 | 2.435586 | GACACAGCAGCGGCAGAT | 60.436 | 61.111 | 12.44 | 0.00 | 44.61 | 2.90 |
369 | 374 | 3.511595 | AATGCATCGTGCCGCTGG | 61.512 | 61.111 | 0.00 | 0.00 | 44.23 | 4.85 |
403 | 408 | 3.876309 | ACCAAACTAAGGCCTCAGAAA | 57.124 | 42.857 | 10.91 | 0.00 | 0.00 | 2.52 |
549 | 554 | 2.438434 | CCATCAACCGGCCAGGAC | 60.438 | 66.667 | 18.74 | 0.00 | 45.00 | 3.85 |
599 | 604 | 1.004200 | GGCCGAACCCGAGAAAAGA | 60.004 | 57.895 | 0.00 | 0.00 | 38.22 | 2.52 |
630 | 635 | 1.670811 | GCATGCTTAGCGAGGCTTTAA | 59.329 | 47.619 | 11.37 | 0.00 | 40.44 | 1.52 |
635 | 640 | 0.453390 | AAAAGCATGCTTAGCGAGGC | 59.547 | 50.000 | 32.12 | 3.02 | 34.84 | 4.70 |
636 | 641 | 1.202222 | CCAAAAGCATGCTTAGCGAGG | 60.202 | 52.381 | 32.12 | 23.02 | 34.84 | 4.63 |
637 | 642 | 1.470098 | ACCAAAAGCATGCTTAGCGAG | 59.530 | 47.619 | 32.12 | 20.37 | 34.84 | 5.03 |
638 | 643 | 1.468520 | GACCAAAAGCATGCTTAGCGA | 59.531 | 47.619 | 32.12 | 0.00 | 34.84 | 4.93 |
639 | 644 | 1.470098 | AGACCAAAAGCATGCTTAGCG | 59.530 | 47.619 | 32.12 | 22.46 | 34.84 | 4.26 |
640 | 645 | 2.489329 | TCAGACCAAAAGCATGCTTAGC | 59.511 | 45.455 | 32.12 | 18.64 | 34.84 | 3.09 |
641 | 646 | 4.771590 | TTCAGACCAAAAGCATGCTTAG | 57.228 | 40.909 | 32.12 | 25.34 | 34.84 | 2.18 |
642 | 647 | 4.556501 | CGTTTCAGACCAAAAGCATGCTTA | 60.557 | 41.667 | 32.12 | 12.16 | 34.84 | 3.09 |
643 | 648 | 3.721035 | GTTTCAGACCAAAAGCATGCTT | 58.279 | 40.909 | 27.21 | 27.21 | 37.98 | 3.91 |
644 | 649 | 2.287788 | CGTTTCAGACCAAAAGCATGCT | 60.288 | 45.455 | 16.30 | 16.30 | 0.00 | 3.79 |
645 | 650 | 2.053627 | CGTTTCAGACCAAAAGCATGC | 58.946 | 47.619 | 10.51 | 10.51 | 0.00 | 4.06 |
646 | 651 | 2.607771 | CCCGTTTCAGACCAAAAGCATG | 60.608 | 50.000 | 0.00 | 0.00 | 0.00 | 4.06 |
647 | 652 | 1.613437 | CCCGTTTCAGACCAAAAGCAT | 59.387 | 47.619 | 0.00 | 0.00 | 0.00 | 3.79 |
648 | 653 | 1.028905 | CCCGTTTCAGACCAAAAGCA | 58.971 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
649 | 654 | 0.313987 | CCCCGTTTCAGACCAAAAGC | 59.686 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
650 | 655 | 0.958822 | CCCCCGTTTCAGACCAAAAG | 59.041 | 55.000 | 0.00 | 0.00 | 0.00 | 2.27 |
651 | 656 | 1.110518 | GCCCCCGTTTCAGACCAAAA | 61.111 | 55.000 | 0.00 | 0.00 | 0.00 | 2.44 |
652 | 657 | 1.529713 | GCCCCCGTTTCAGACCAAA | 60.530 | 57.895 | 0.00 | 0.00 | 0.00 | 3.28 |
653 | 658 | 2.114411 | GCCCCCGTTTCAGACCAA | 59.886 | 61.111 | 0.00 | 0.00 | 0.00 | 3.67 |
654 | 659 | 4.323477 | CGCCCCCGTTTCAGACCA | 62.323 | 66.667 | 0.00 | 0.00 | 0.00 | 4.02 |
681 | 686 | 9.557061 | CAATCTAAGTCTAGGGGGTTTAATAAC | 57.443 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
682 | 687 | 9.287818 | ACAATCTAAGTCTAGGGGGTTTAATAA | 57.712 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
683 | 688 | 8.865244 | ACAATCTAAGTCTAGGGGGTTTAATA | 57.135 | 34.615 | 0.00 | 0.00 | 0.00 | 0.98 |
684 | 689 | 7.766736 | ACAATCTAAGTCTAGGGGGTTTAAT | 57.233 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
685 | 690 | 8.865244 | ATACAATCTAAGTCTAGGGGGTTTAA | 57.135 | 34.615 | 0.00 | 0.00 | 0.00 | 1.52 |
686 | 691 | 7.511714 | GGATACAATCTAAGTCTAGGGGGTTTA | 59.488 | 40.741 | 0.00 | 0.00 | 0.00 | 2.01 |
687 | 692 | 6.329460 | GGATACAATCTAAGTCTAGGGGGTTT | 59.671 | 42.308 | 0.00 | 0.00 | 0.00 | 3.27 |
688 | 693 | 5.845065 | GGATACAATCTAAGTCTAGGGGGTT | 59.155 | 44.000 | 0.00 | 0.00 | 0.00 | 4.11 |
689 | 694 | 5.138123 | AGGATACAATCTAAGTCTAGGGGGT | 59.862 | 44.000 | 0.00 | 0.00 | 41.41 | 4.95 |
690 | 695 | 5.656420 | AGGATACAATCTAAGTCTAGGGGG | 58.344 | 45.833 | 0.00 | 0.00 | 41.41 | 5.40 |
691 | 696 | 8.116669 | TCATAGGATACAATCTAAGTCTAGGGG | 58.883 | 40.741 | 0.00 | 0.00 | 41.41 | 4.79 |
692 | 697 | 9.535170 | TTCATAGGATACAATCTAAGTCTAGGG | 57.465 | 37.037 | 0.00 | 0.00 | 41.41 | 3.53 |
726 | 731 | 8.850156 | AGTCTAAACACACTTGCTTTATTGATT | 58.150 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
727 | 732 | 8.396272 | AGTCTAAACACACTTGCTTTATTGAT | 57.604 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
728 | 733 | 7.497579 | TGAGTCTAAACACACTTGCTTTATTGA | 59.502 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
729 | 734 | 7.639039 | TGAGTCTAAACACACTTGCTTTATTG | 58.361 | 34.615 | 0.00 | 0.00 | 0.00 | 1.90 |
730 | 735 | 7.715249 | TCTGAGTCTAAACACACTTGCTTTATT | 59.285 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
731 | 736 | 7.217200 | TCTGAGTCTAAACACACTTGCTTTAT | 58.783 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
732 | 737 | 6.578944 | TCTGAGTCTAAACACACTTGCTTTA | 58.421 | 36.000 | 0.00 | 0.00 | 0.00 | 1.85 |
733 | 738 | 5.428253 | TCTGAGTCTAAACACACTTGCTTT | 58.572 | 37.500 | 0.00 | 0.00 | 0.00 | 3.51 |
734 | 739 | 5.023533 | TCTGAGTCTAAACACACTTGCTT | 57.976 | 39.130 | 0.00 | 0.00 | 0.00 | 3.91 |
735 | 740 | 4.672587 | TCTGAGTCTAAACACACTTGCT | 57.327 | 40.909 | 0.00 | 0.00 | 0.00 | 3.91 |
736 | 741 | 5.734855 | TTTCTGAGTCTAAACACACTTGC | 57.265 | 39.130 | 0.00 | 0.00 | 0.00 | 4.01 |
759 | 764 | 8.161699 | AGAATCATACGGTGTGTTAAGTTTTT | 57.838 | 30.769 | 4.77 | 0.00 | 0.00 | 1.94 |
760 | 765 | 7.739498 | AGAATCATACGGTGTGTTAAGTTTT | 57.261 | 32.000 | 4.77 | 0.00 | 0.00 | 2.43 |
761 | 766 | 8.836268 | TTAGAATCATACGGTGTGTTAAGTTT | 57.164 | 30.769 | 4.77 | 0.00 | 0.00 | 2.66 |
762 | 767 | 8.836268 | TTTAGAATCATACGGTGTGTTAAGTT | 57.164 | 30.769 | 4.77 | 0.00 | 0.00 | 2.66 |
763 | 768 | 8.836268 | TTTTAGAATCATACGGTGTGTTAAGT | 57.164 | 30.769 | 4.77 | 0.00 | 0.00 | 2.24 |
848 | 854 | 4.087085 | GTGATTTTGCTTCGATTCACGTTG | 59.913 | 41.667 | 0.00 | 0.00 | 43.13 | 4.10 |
850 | 856 | 3.364964 | GGTGATTTTGCTTCGATTCACGT | 60.365 | 43.478 | 0.00 | 0.00 | 43.13 | 4.49 |
879 | 885 | 1.755179 | GCTGAGAAATGGCCAAGCTA | 58.245 | 50.000 | 10.96 | 0.00 | 0.00 | 3.32 |
880 | 886 | 1.310933 | CGCTGAGAAATGGCCAAGCT | 61.311 | 55.000 | 19.80 | 13.08 | 0.00 | 3.74 |
881 | 887 | 1.138247 | CGCTGAGAAATGGCCAAGC | 59.862 | 57.895 | 10.96 | 12.74 | 0.00 | 4.01 |
882 | 888 | 0.731417 | CTCGCTGAGAAATGGCCAAG | 59.269 | 55.000 | 10.96 | 1.53 | 0.00 | 3.61 |
883 | 889 | 1.308069 | GCTCGCTGAGAAATGGCCAA | 61.308 | 55.000 | 10.96 | 0.00 | 0.00 | 4.52 |
884 | 890 | 1.746615 | GCTCGCTGAGAAATGGCCA | 60.747 | 57.895 | 8.56 | 8.56 | 0.00 | 5.36 |
885 | 891 | 1.451028 | AGCTCGCTGAGAAATGGCC | 60.451 | 57.895 | 0.00 | 0.00 | 0.00 | 5.36 |
886 | 892 | 1.712977 | CCAGCTCGCTGAGAAATGGC | 61.713 | 60.000 | 19.78 | 0.00 | 46.30 | 4.40 |
887 | 893 | 1.712977 | GCCAGCTCGCTGAGAAATGG | 61.713 | 60.000 | 19.78 | 7.73 | 46.30 | 3.16 |
991 | 1007 | 2.690510 | TGGATCCATGGCCACGGA | 60.691 | 61.111 | 25.24 | 25.24 | 35.27 | 4.69 |
1172 | 1215 | 2.285668 | TTCTGGGGCTGGGAGAGG | 60.286 | 66.667 | 0.00 | 0.00 | 0.00 | 3.69 |
1174 | 1217 | 3.011517 | GCTTCTGGGGCTGGGAGA | 61.012 | 66.667 | 0.00 | 0.00 | 0.00 | 3.71 |
1366 | 1456 | 6.705302 | TGATGTAGCTCAAGAGAGAAACAAT | 58.295 | 36.000 | 0.32 | 0.00 | 44.98 | 2.71 |
1373 | 1463 | 6.751157 | AGATGATTGATGTAGCTCAAGAGAG | 58.249 | 40.000 | 0.32 | 0.00 | 44.96 | 3.20 |
1424 | 1521 | 6.312918 | TCCAAATTACGTAGCAATGAAGAGTC | 59.687 | 38.462 | 0.00 | 0.00 | 0.00 | 3.36 |
1426 | 1523 | 6.662414 | TCCAAATTACGTAGCAATGAAGAG | 57.338 | 37.500 | 0.00 | 0.00 | 0.00 | 2.85 |
1436 | 1533 | 2.290641 | GCTGGGCATCCAAATTACGTAG | 59.709 | 50.000 | 0.00 | 0.00 | 43.51 | 3.51 |
1437 | 1534 | 2.294074 | GCTGGGCATCCAAATTACGTA | 58.706 | 47.619 | 0.00 | 0.00 | 43.51 | 3.57 |
1438 | 1535 | 1.102978 | GCTGGGCATCCAAATTACGT | 58.897 | 50.000 | 0.00 | 0.00 | 43.51 | 3.57 |
1439 | 1536 | 0.029300 | CGCTGGGCATCCAAATTACG | 59.971 | 55.000 | 0.00 | 0.00 | 43.51 | 3.18 |
1471 | 1568 | 1.065926 | CAACTCCAGCAGTAGCATGGA | 60.066 | 52.381 | 0.00 | 0.00 | 45.49 | 3.41 |
1472 | 1569 | 1.339438 | ACAACTCCAGCAGTAGCATGG | 60.339 | 52.381 | 0.00 | 0.00 | 45.49 | 3.66 |
1473 | 1570 | 2.105006 | ACAACTCCAGCAGTAGCATG | 57.895 | 50.000 | 0.00 | 0.00 | 45.49 | 4.06 |
1474 | 1571 | 3.261897 | ACTTACAACTCCAGCAGTAGCAT | 59.738 | 43.478 | 0.00 | 0.00 | 45.49 | 3.79 |
1494 | 1792 | 1.204146 | ACTCAGGGTGACACAACACT | 58.796 | 50.000 | 8.08 | 0.00 | 40.22 | 3.55 |
1505 | 1803 | 1.476007 | GGAGCACACTCACTCAGGGT | 61.476 | 60.000 | 0.00 | 0.00 | 45.42 | 4.34 |
1506 | 1804 | 1.190833 | AGGAGCACACTCACTCAGGG | 61.191 | 60.000 | 0.00 | 0.00 | 45.42 | 4.45 |
1507 | 1805 | 0.246086 | GAGGAGCACACTCACTCAGG | 59.754 | 60.000 | 0.00 | 0.00 | 45.42 | 3.86 |
1510 | 1808 | 0.530288 | GGAGAGGAGCACACTCACTC | 59.470 | 60.000 | 7.83 | 9.46 | 45.42 | 3.51 |
1512 | 1810 | 0.972883 | AAGGAGAGGAGCACACTCAC | 59.027 | 55.000 | 7.83 | 1.07 | 45.42 | 3.51 |
1521 | 1822 | 2.170187 | CCTGGAACATCAAGGAGAGGAG | 59.830 | 54.545 | 0.00 | 0.00 | 38.20 | 3.69 |
1526 | 1827 | 3.920231 | TCATCCTGGAACATCAAGGAG | 57.080 | 47.619 | 9.28 | 2.79 | 38.20 | 3.69 |
1631 | 1932 | 9.308318 | TCATGAATCATTTTTGCATAAGTGATG | 57.692 | 29.630 | 22.19 | 14.41 | 35.47 | 3.07 |
1783 | 2109 | 6.422223 | CAAATCTAATCGTTGCATACCTGTC | 58.578 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1994 | 2339 | 6.948309 | ACAGTTAGCACATAAAAGGGAAGAAT | 59.052 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
2028 | 2431 | 5.046950 | AGGAAGGAGAGTGTACAATCAACTC | 60.047 | 44.000 | 23.89 | 13.16 | 0.00 | 3.01 |
2156 | 2562 | 1.799258 | GCAACAGTGGAAGCACCTGG | 61.799 | 60.000 | 0.00 | 0.00 | 39.86 | 4.45 |
2350 | 2786 | 1.065854 | ACATCTGTGCCACCTAGAAGC | 60.066 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
2427 | 2863 | 7.921786 | AAATGAATTAAGTTGAGATCCGTGA | 57.078 | 32.000 | 0.00 | 0.00 | 0.00 | 4.35 |
2439 | 2876 | 8.860088 | AGCACTAAAGTCCAAAATGAATTAAGT | 58.140 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
2595 | 3034 | 5.299028 | ACACATCAACAGTGCAAATAGAACA | 59.701 | 36.000 | 0.00 | 0.00 | 40.59 | 3.18 |
2670 | 3109 | 6.761242 | CAGTAAGATGAATACGTCAAATGGGA | 59.239 | 38.462 | 0.00 | 0.00 | 40.50 | 4.37 |
2771 | 3293 | 7.419204 | TCTATAAAGCTCTAGAAAGTTCGAGC | 58.581 | 38.462 | 11.01 | 11.01 | 46.89 | 5.03 |
2852 | 3390 | 7.768120 | AGTTCTCAGAAATGTGGAATATCACTC | 59.232 | 37.037 | 0.00 | 0.00 | 38.40 | 3.51 |
2919 | 3457 | 8.386012 | AGATCGAAGATTCTAATATGGGGAAT | 57.614 | 34.615 | 0.00 | 0.00 | 45.12 | 3.01 |
2920 | 3458 | 7.798710 | AGATCGAAGATTCTAATATGGGGAA | 57.201 | 36.000 | 0.00 | 0.00 | 45.12 | 3.97 |
2921 | 3459 | 7.798710 | AAGATCGAAGATTCTAATATGGGGA | 57.201 | 36.000 | 0.00 | 0.00 | 45.12 | 4.81 |
2922 | 3460 | 7.550906 | GGAAAGATCGAAGATTCTAATATGGGG | 59.449 | 40.741 | 0.00 | 0.00 | 45.12 | 4.96 |
2923 | 3461 | 8.097038 | TGGAAAGATCGAAGATTCTAATATGGG | 58.903 | 37.037 | 0.00 | 0.00 | 45.12 | 4.00 |
2924 | 3462 | 9.149225 | CTGGAAAGATCGAAGATTCTAATATGG | 57.851 | 37.037 | 0.00 | 0.00 | 45.12 | 2.74 |
2925 | 3463 | 9.703892 | ACTGGAAAGATCGAAGATTCTAATATG | 57.296 | 33.333 | 0.00 | 0.00 | 45.12 | 1.78 |
2994 | 3534 | 3.437049 | CCTTTGTCAAGCTACAAGGCTAC | 59.563 | 47.826 | 6.07 | 0.00 | 42.24 | 3.58 |
2995 | 3535 | 3.559171 | CCCTTTGTCAAGCTACAAGGCTA | 60.559 | 47.826 | 6.07 | 0.00 | 42.24 | 3.93 |
2996 | 3536 | 2.508526 | CCTTTGTCAAGCTACAAGGCT | 58.491 | 47.619 | 6.07 | 0.00 | 45.30 | 4.58 |
2997 | 3537 | 1.541588 | CCCTTTGTCAAGCTACAAGGC | 59.458 | 52.381 | 6.07 | 0.00 | 40.29 | 4.35 |
2998 | 3538 | 2.554032 | CACCCTTTGTCAAGCTACAAGG | 59.446 | 50.000 | 4.85 | 4.85 | 40.29 | 3.61 |
2999 | 3539 | 2.030805 | GCACCCTTTGTCAAGCTACAAG | 60.031 | 50.000 | 2.49 | 0.00 | 40.29 | 3.16 |
3000 | 3540 | 1.953686 | GCACCCTTTGTCAAGCTACAA | 59.046 | 47.619 | 0.00 | 0.00 | 37.58 | 2.41 |
3183 | 3749 | 7.671495 | ATTGGACAAACCTGAAATTAAATGC | 57.329 | 32.000 | 0.00 | 0.00 | 39.86 | 3.56 |
3293 | 3861 | 9.590088 | GGAGTTACTATAAAAAGAAACGTGTTG | 57.410 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
3306 | 3874 | 9.595823 | GCAAGTGTATTGAGGAGTTACTATAAA | 57.404 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
3314 | 3882 | 2.038557 | ACCGCAAGTGTATTGAGGAGTT | 59.961 | 45.455 | 15.84 | 0.00 | 41.10 | 3.01 |
3331 | 3899 | 2.130073 | GAAAGGTCAAGTGGCACCGC | 62.130 | 60.000 | 15.27 | 1.86 | 37.79 | 5.68 |
3332 | 3900 | 0.535102 | AGAAAGGTCAAGTGGCACCG | 60.535 | 55.000 | 15.27 | 6.13 | 37.79 | 4.94 |
3441 | 4009 | 4.940654 | AGGCTTTCTACAGAAATTCTCAGC | 59.059 | 41.667 | 4.93 | 4.15 | 42.44 | 4.26 |
3555 | 4123 | 3.451526 | GCAAGGAGCAATCTAAATTGGC | 58.548 | 45.455 | 0.79 | 0.00 | 42.18 | 4.52 |
3607 | 4181 | 0.318445 | GATCGCAGATGCAATTGGCC | 60.318 | 55.000 | 7.72 | 0.00 | 45.12 | 5.36 |
3831 | 4511 | 6.532657 | GGAGGACAATATGAAATTTGCAAGTG | 59.467 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
3882 | 4562 | 8.359642 | CAGGTCAAGGTTTTTCATTTCAGATAA | 58.640 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
3949 | 4630 | 5.184892 | AGCATATGGGTGAAAAAGACTCT | 57.815 | 39.130 | 4.56 | 0.00 | 0.00 | 3.24 |
4039 | 4720 | 4.987285 | ACGTTAGCATGCATATTCAGAGAG | 59.013 | 41.667 | 21.98 | 0.83 | 0.00 | 3.20 |
4040 | 4721 | 4.948847 | ACGTTAGCATGCATATTCAGAGA | 58.051 | 39.130 | 21.98 | 0.00 | 0.00 | 3.10 |
4067 | 4749 | 2.645838 | AATGAAGATACTGCCGGCAT | 57.354 | 45.000 | 32.87 | 21.92 | 0.00 | 4.40 |
4111 | 4793 | 5.808366 | TCTACAAGTTTCCATCTGTGTCT | 57.192 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
4329 | 5011 | 2.663602 | CGTGCACTCAGTATCTTGTGAC | 59.336 | 50.000 | 16.19 | 0.00 | 32.72 | 3.67 |
4371 | 5059 | 6.150318 | TCACGAAAGAATAGTTGTCTCAGTC | 58.850 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
4391 | 5079 | 1.369625 | GGCCCTAGACATTGTTCACG | 58.630 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
4484 | 5173 | 7.146715 | AGATCAATAGGGACATCTTCAACAT | 57.853 | 36.000 | 0.00 | 0.00 | 0.00 | 2.71 |
4719 | 5415 | 9.326413 | CAGTAATAGGGAAGTAAACAATGTAGG | 57.674 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
4737 | 5433 | 7.831753 | TCTCTCAAAGGACAGTTCAGTAATAG | 58.168 | 38.462 | 0.00 | 0.00 | 0.00 | 1.73 |
4753 | 5449 | 3.188048 | GCACACATCAGGTTCTCTCAAAG | 59.812 | 47.826 | 0.00 | 0.00 | 0.00 | 2.77 |
4761 | 5459 | 2.816087 | ACAATCTGCACACATCAGGTTC | 59.184 | 45.455 | 0.00 | 0.00 | 32.96 | 3.62 |
4889 | 5587 | 1.202604 | ACACACGGAGTAAGTTGTGGG | 60.203 | 52.381 | 5.63 | 0.00 | 41.61 | 4.61 |
4932 | 5633 | 6.486657 | TGGAGGAATGAACTAACTGAAACAAG | 59.513 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
4948 | 5649 | 8.682936 | AATAAGCACTATAACTTGGAGGAATG | 57.317 | 34.615 | 0.00 | 0.00 | 0.00 | 2.67 |
4967 | 5668 | 9.595823 | TTCTAGCATTCCCGTTATATAATAAGC | 57.404 | 33.333 | 0.00 | 0.00 | 0.00 | 3.09 |
5025 | 5727 | 1.255882 | TTGCCATCCTCGCAACAATT | 58.744 | 45.000 | 0.00 | 0.00 | 41.17 | 2.32 |
5027 | 5729 | 1.255882 | ATTTGCCATCCTCGCAACAA | 58.744 | 45.000 | 0.00 | 0.00 | 45.48 | 2.83 |
5028 | 5730 | 1.255882 | AATTTGCCATCCTCGCAACA | 58.744 | 45.000 | 0.00 | 0.00 | 45.48 | 3.33 |
5029 | 5731 | 2.368655 | AAATTTGCCATCCTCGCAAC | 57.631 | 45.000 | 0.00 | 0.00 | 45.48 | 4.17 |
5032 | 5734 | 3.782889 | AACTAAATTTGCCATCCTCGC | 57.217 | 42.857 | 0.00 | 0.00 | 0.00 | 5.03 |
5051 | 5774 | 2.824689 | TCCAGGAATTGCCATGCTAA | 57.175 | 45.000 | 0.00 | 0.00 | 40.02 | 3.09 |
5112 | 5835 | 4.226761 | GTTGTCGCGAGGATGAAAATTTT | 58.773 | 39.130 | 10.24 | 2.28 | 0.00 | 1.82 |
5118 | 5841 | 2.951457 | TATGTTGTCGCGAGGATGAA | 57.049 | 45.000 | 10.24 | 0.00 | 0.00 | 2.57 |
5284 | 6008 | 2.973694 | TCCCAACGGCATCTTAGTAC | 57.026 | 50.000 | 0.00 | 0.00 | 0.00 | 2.73 |
5417 | 6160 | 5.163343 | TGCTCCCAGACACTAACATATAACC | 60.163 | 44.000 | 0.00 | 0.00 | 0.00 | 2.85 |
5418 | 6161 | 5.914033 | TGCTCCCAGACACTAACATATAAC | 58.086 | 41.667 | 0.00 | 0.00 | 0.00 | 1.89 |
5419 | 6162 | 6.747414 | ATGCTCCCAGACACTAACATATAA | 57.253 | 37.500 | 0.00 | 0.00 | 0.00 | 0.98 |
5420 | 6163 | 7.010771 | ACTATGCTCCCAGACACTAACATATA | 58.989 | 38.462 | 0.00 | 0.00 | 0.00 | 0.86 |
5421 | 6164 | 5.841237 | ACTATGCTCCCAGACACTAACATAT | 59.159 | 40.000 | 0.00 | 0.00 | 0.00 | 1.78 |
5422 | 6165 | 5.208890 | ACTATGCTCCCAGACACTAACATA | 58.791 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
5423 | 6166 | 4.033709 | ACTATGCTCCCAGACACTAACAT | 58.966 | 43.478 | 0.00 | 0.00 | 0.00 | 2.71 |
5424 | 6167 | 3.441101 | ACTATGCTCCCAGACACTAACA | 58.559 | 45.455 | 0.00 | 0.00 | 0.00 | 2.41 |
5663 | 6609 | 9.768662 | AAGATTGCAGAAGTTTTATTTTCACAT | 57.231 | 25.926 | 0.00 | 0.00 | 0.00 | 3.21 |
5685 | 6634 | 4.608948 | ACAGCGCCTAAATAGCTAAGAT | 57.391 | 40.909 | 2.29 | 0.00 | 39.48 | 2.40 |
5699 | 6648 | 3.627218 | GCGATACCGAACAGCGCC | 61.627 | 66.667 | 2.29 | 0.00 | 41.65 | 6.53 |
5702 | 6651 | 4.014065 | GGAGCGATACCGAACAGC | 57.986 | 61.111 | 0.00 | 0.00 | 38.22 | 4.40 |
5716 | 6665 | 1.079543 | CTGGAGTTGTGGAGCGGAG | 60.080 | 63.158 | 0.00 | 0.00 | 0.00 | 4.63 |
5717 | 6666 | 2.583441 | CCTGGAGTTGTGGAGCGGA | 61.583 | 63.158 | 0.00 | 0.00 | 0.00 | 5.54 |
5718 | 6667 | 2.046892 | CCTGGAGTTGTGGAGCGG | 60.047 | 66.667 | 0.00 | 0.00 | 0.00 | 5.52 |
5719 | 6668 | 1.079543 | CTCCTGGAGTTGTGGAGCG | 60.080 | 63.158 | 15.76 | 0.00 | 40.52 | 5.03 |
5722 | 6671 | 2.583441 | CCGCTCCTGGAGTTGTGGA | 61.583 | 63.158 | 23.92 | 0.00 | 31.39 | 4.02 |
5723 | 6672 | 2.046892 | CCGCTCCTGGAGTTGTGG | 60.047 | 66.667 | 23.92 | 16.41 | 31.39 | 4.17 |
5724 | 6673 | 3.059982 | TCCGCTCCTGGAGTTGTG | 58.940 | 61.111 | 23.92 | 11.88 | 33.05 | 3.33 |
5730 | 6679 | 3.706373 | GCCAACTCCGCTCCTGGA | 61.706 | 66.667 | 0.00 | 0.00 | 36.37 | 3.86 |
5734 | 6683 | 4.821589 | CTCCGCCAACTCCGCTCC | 62.822 | 72.222 | 0.00 | 0.00 | 0.00 | 4.70 |
5739 | 6688 | 4.704833 | TGCAGCTCCGCCAACTCC | 62.705 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
5740 | 6689 | 3.123620 | CTGCAGCTCCGCCAACTC | 61.124 | 66.667 | 0.00 | 0.00 | 0.00 | 3.01 |
5741 | 6690 | 3.482232 | AACTGCAGCTCCGCCAACT | 62.482 | 57.895 | 15.27 | 0.00 | 0.00 | 3.16 |
5742 | 6691 | 2.970974 | GAACTGCAGCTCCGCCAAC | 61.971 | 63.158 | 15.27 | 0.00 | 0.00 | 3.77 |
5743 | 6692 | 2.669569 | GAACTGCAGCTCCGCCAA | 60.670 | 61.111 | 15.27 | 0.00 | 0.00 | 4.52 |
5744 | 6693 | 2.956799 | TTTGAACTGCAGCTCCGCCA | 62.957 | 55.000 | 15.27 | 0.00 | 0.00 | 5.69 |
5745 | 6694 | 1.795170 | TTTTGAACTGCAGCTCCGCC | 61.795 | 55.000 | 15.27 | 0.00 | 0.00 | 6.13 |
5746 | 6695 | 0.242017 | ATTTTGAACTGCAGCTCCGC | 59.758 | 50.000 | 15.27 | 0.00 | 0.00 | 5.54 |
5747 | 6696 | 1.401931 | CCATTTTGAACTGCAGCTCCG | 60.402 | 52.381 | 15.27 | 0.00 | 0.00 | 4.63 |
5748 | 6697 | 1.670967 | GCCATTTTGAACTGCAGCTCC | 60.671 | 52.381 | 15.27 | 3.47 | 0.00 | 4.70 |
5749 | 6698 | 1.706443 | GCCATTTTGAACTGCAGCTC | 58.294 | 50.000 | 15.27 | 12.53 | 0.00 | 4.09 |
5750 | 6699 | 0.038892 | CGCCATTTTGAACTGCAGCT | 60.039 | 50.000 | 15.27 | 0.00 | 0.00 | 4.24 |
5751 | 6700 | 1.010419 | CCGCCATTTTGAACTGCAGC | 61.010 | 55.000 | 15.27 | 0.00 | 0.00 | 5.25 |
5752 | 6701 | 0.597568 | TCCGCCATTTTGAACTGCAG | 59.402 | 50.000 | 13.48 | 13.48 | 0.00 | 4.41 |
5753 | 6702 | 0.597568 | CTCCGCCATTTTGAACTGCA | 59.402 | 50.000 | 0.00 | 0.00 | 0.00 | 4.41 |
5754 | 6703 | 0.598065 | ACTCCGCCATTTTGAACTGC | 59.402 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
5755 | 6704 | 2.664916 | CAACTCCGCCATTTTGAACTG | 58.335 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
5756 | 6705 | 1.000274 | GCAACTCCGCCATTTTGAACT | 60.000 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
5757 | 6706 | 1.269517 | TGCAACTCCGCCATTTTGAAC | 60.270 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
5758 | 6707 | 1.000385 | CTGCAACTCCGCCATTTTGAA | 60.000 | 47.619 | 0.00 | 0.00 | 0.00 | 2.69 |
5759 | 6708 | 0.597568 | CTGCAACTCCGCCATTTTGA | 59.402 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
5760 | 6709 | 0.314935 | ACTGCAACTCCGCCATTTTG | 59.685 | 50.000 | 0.00 | 0.00 | 0.00 | 2.44 |
5761 | 6710 | 1.039856 | AACTGCAACTCCGCCATTTT | 58.960 | 45.000 | 0.00 | 0.00 | 0.00 | 1.82 |
5762 | 6711 | 1.000274 | GAAACTGCAACTCCGCCATTT | 60.000 | 47.619 | 0.00 | 0.00 | 0.00 | 2.32 |
5763 | 6712 | 0.598065 | GAAACTGCAACTCCGCCATT | 59.402 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
5764 | 6713 | 1.244019 | GGAAACTGCAACTCCGCCAT | 61.244 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
5765 | 6714 | 1.896660 | GGAAACTGCAACTCCGCCA | 60.897 | 57.895 | 0.00 | 0.00 | 0.00 | 5.69 |
5766 | 6715 | 2.626780 | GGGAAACTGCAACTCCGCC | 61.627 | 63.158 | 0.00 | 0.00 | 0.00 | 6.13 |
5767 | 6716 | 2.626780 | GGGGAAACTGCAACTCCGC | 61.627 | 63.158 | 8.96 | 8.96 | 35.35 | 5.54 |
5768 | 6717 | 1.971695 | GGGGGAAACTGCAACTCCG | 60.972 | 63.158 | 0.00 | 0.00 | 0.00 | 4.63 |
5769 | 6718 | 0.609406 | GAGGGGGAAACTGCAACTCC | 60.609 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
5770 | 6719 | 0.609406 | GGAGGGGGAAACTGCAACTC | 60.609 | 60.000 | 0.00 | 0.00 | 0.00 | 3.01 |
5771 | 6720 | 1.460699 | GGAGGGGGAAACTGCAACT | 59.539 | 57.895 | 0.00 | 0.00 | 0.00 | 3.16 |
5772 | 6721 | 1.971695 | CGGAGGGGGAAACTGCAAC | 60.972 | 63.158 | 0.00 | 0.00 | 0.00 | 4.17 |
5773 | 6722 | 2.434331 | CGGAGGGGGAAACTGCAA | 59.566 | 61.111 | 0.00 | 0.00 | 0.00 | 4.08 |
5774 | 6723 | 4.344865 | GCGGAGGGGGAAACTGCA | 62.345 | 66.667 | 0.00 | 0.00 | 36.16 | 4.41 |
5775 | 6724 | 4.344865 | TGCGGAGGGGGAAACTGC | 62.345 | 66.667 | 0.00 | 0.00 | 36.58 | 4.40 |
5776 | 6725 | 1.915078 | ATCTGCGGAGGGGGAAACTG | 61.915 | 60.000 | 3.37 | 0.00 | 0.00 | 3.16 |
5777 | 6726 | 1.208165 | AATCTGCGGAGGGGGAAACT | 61.208 | 55.000 | 3.37 | 0.00 | 0.00 | 2.66 |
5778 | 6727 | 0.748367 | GAATCTGCGGAGGGGGAAAC | 60.748 | 60.000 | 3.37 | 0.00 | 0.00 | 2.78 |
5779 | 6728 | 1.607612 | GAATCTGCGGAGGGGGAAA | 59.392 | 57.895 | 3.37 | 0.00 | 0.00 | 3.13 |
5780 | 6729 | 2.375345 | GGAATCTGCGGAGGGGGAA | 61.375 | 63.158 | 3.37 | 0.00 | 0.00 | 3.97 |
5781 | 6730 | 2.768344 | GGAATCTGCGGAGGGGGA | 60.768 | 66.667 | 3.37 | 0.00 | 0.00 | 4.81 |
5782 | 6731 | 4.241555 | CGGAATCTGCGGAGGGGG | 62.242 | 72.222 | 3.37 | 0.00 | 0.00 | 5.40 |
5789 | 6738 | 2.202932 | CCACTCCCGGAATCTGCG | 60.203 | 66.667 | 0.73 | 0.00 | 0.00 | 5.18 |
5790 | 6739 | 1.335132 | TACCCACTCCCGGAATCTGC | 61.335 | 60.000 | 0.73 | 0.00 | 0.00 | 4.26 |
5791 | 6740 | 1.200519 | TTACCCACTCCCGGAATCTG | 58.799 | 55.000 | 0.73 | 0.00 | 0.00 | 2.90 |
5792 | 6741 | 2.191981 | ATTACCCACTCCCGGAATCT | 57.808 | 50.000 | 0.73 | 0.00 | 0.00 | 2.40 |
5793 | 6742 | 3.495629 | GGTAATTACCCACTCCCGGAATC | 60.496 | 52.174 | 22.15 | 0.00 | 40.53 | 2.52 |
5794 | 6743 | 2.440627 | GGTAATTACCCACTCCCGGAAT | 59.559 | 50.000 | 22.15 | 0.00 | 40.53 | 3.01 |
5795 | 6744 | 1.839354 | GGTAATTACCCACTCCCGGAA | 59.161 | 52.381 | 22.15 | 0.00 | 40.53 | 4.30 |
5796 | 6745 | 1.499368 | GGTAATTACCCACTCCCGGA | 58.501 | 55.000 | 22.15 | 0.00 | 40.53 | 5.14 |
5797 | 6746 | 0.105408 | CGGTAATTACCCACTCCCGG | 59.895 | 60.000 | 25.64 | 8.07 | 43.51 | 5.73 |
5798 | 6747 | 1.113788 | TCGGTAATTACCCACTCCCG | 58.886 | 55.000 | 25.64 | 14.15 | 43.51 | 5.14 |
5799 | 6748 | 2.236893 | TGTTCGGTAATTACCCACTCCC | 59.763 | 50.000 | 25.64 | 10.59 | 43.51 | 4.30 |
5800 | 6749 | 3.528532 | CTGTTCGGTAATTACCCACTCC | 58.471 | 50.000 | 25.64 | 11.79 | 43.51 | 3.85 |
5801 | 6750 | 3.528532 | CCTGTTCGGTAATTACCCACTC | 58.471 | 50.000 | 25.64 | 15.08 | 43.51 | 3.51 |
5802 | 6751 | 2.237893 | CCCTGTTCGGTAATTACCCACT | 59.762 | 50.000 | 25.64 | 0.00 | 43.51 | 4.00 |
5803 | 6752 | 2.635714 | CCCTGTTCGGTAATTACCCAC | 58.364 | 52.381 | 25.64 | 21.83 | 43.51 | 4.61 |
5804 | 6753 | 1.065272 | GCCCTGTTCGGTAATTACCCA | 60.065 | 52.381 | 25.64 | 17.55 | 43.51 | 4.51 |
5805 | 6754 | 1.671979 | GCCCTGTTCGGTAATTACCC | 58.328 | 55.000 | 25.64 | 14.22 | 43.51 | 3.69 |
5806 | 6755 | 1.211212 | AGGCCCTGTTCGGTAATTACC | 59.789 | 52.381 | 22.69 | 22.69 | 42.98 | 2.85 |
5807 | 6756 | 2.704464 | AGGCCCTGTTCGGTAATTAC | 57.296 | 50.000 | 7.09 | 7.09 | 0.00 | 1.89 |
5808 | 6757 | 4.470664 | TCTTAAGGCCCTGTTCGGTAATTA | 59.529 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
5809 | 6758 | 3.264964 | TCTTAAGGCCCTGTTCGGTAATT | 59.735 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
5810 | 6759 | 2.841881 | TCTTAAGGCCCTGTTCGGTAAT | 59.158 | 45.455 | 0.00 | 0.00 | 0.00 | 1.89 |
5811 | 6760 | 2.259012 | TCTTAAGGCCCTGTTCGGTAA | 58.741 | 47.619 | 0.00 | 0.00 | 0.00 | 2.85 |
5812 | 6761 | 1.941377 | TCTTAAGGCCCTGTTCGGTA | 58.059 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
5813 | 6762 | 1.061546 | TTCTTAAGGCCCTGTTCGGT | 58.938 | 50.000 | 0.00 | 0.00 | 0.00 | 4.69 |
5814 | 6763 | 2.194201 | TTTCTTAAGGCCCTGTTCGG | 57.806 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5815 | 6764 | 2.882137 | TGTTTTCTTAAGGCCCTGTTCG | 59.118 | 45.455 | 0.00 | 0.00 | 0.00 | 3.95 |
5816 | 6765 | 3.889538 | AGTGTTTTCTTAAGGCCCTGTTC | 59.110 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
5817 | 6766 | 3.636764 | CAGTGTTTTCTTAAGGCCCTGTT | 59.363 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
5818 | 6767 | 3.222603 | CAGTGTTTTCTTAAGGCCCTGT | 58.777 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
5819 | 6768 | 2.029918 | GCAGTGTTTTCTTAAGGCCCTG | 60.030 | 50.000 | 0.00 | 0.00 | 0.00 | 4.45 |
5820 | 6769 | 2.158460 | AGCAGTGTTTTCTTAAGGCCCT | 60.158 | 45.455 | 0.00 | 0.00 | 0.00 | 5.19 |
5821 | 6770 | 2.229062 | GAGCAGTGTTTTCTTAAGGCCC | 59.771 | 50.000 | 0.00 | 0.00 | 0.00 | 5.80 |
5822 | 6771 | 3.057946 | CAGAGCAGTGTTTTCTTAAGGCC | 60.058 | 47.826 | 1.85 | 0.00 | 0.00 | 5.19 |
5823 | 6772 | 3.815401 | TCAGAGCAGTGTTTTCTTAAGGC | 59.185 | 43.478 | 1.85 | 0.00 | 0.00 | 4.35 |
5824 | 6773 | 6.202226 | GTTTCAGAGCAGTGTTTTCTTAAGG | 58.798 | 40.000 | 1.85 | 0.00 | 0.00 | 2.69 |
5825 | 6774 | 6.183360 | TGGTTTCAGAGCAGTGTTTTCTTAAG | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 1.85 |
5826 | 6775 | 5.650266 | TGGTTTCAGAGCAGTGTTTTCTTAA | 59.350 | 36.000 | 0.00 | 0.00 | 0.00 | 1.85 |
5827 | 6776 | 5.189928 | TGGTTTCAGAGCAGTGTTTTCTTA | 58.810 | 37.500 | 0.00 | 0.00 | 0.00 | 2.10 |
5828 | 6777 | 4.016444 | TGGTTTCAGAGCAGTGTTTTCTT | 58.984 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
5829 | 6778 | 3.620488 | TGGTTTCAGAGCAGTGTTTTCT | 58.380 | 40.909 | 0.00 | 0.00 | 0.00 | 2.52 |
5830 | 6779 | 3.957468 | CTGGTTTCAGAGCAGTGTTTTC | 58.043 | 45.455 | 0.00 | 0.00 | 46.35 | 2.29 |
5885 | 6834 | 6.040878 | ACCGATCTTAAAGGAAAGATGTACG | 58.959 | 40.000 | 3.93 | 2.48 | 44.38 | 3.67 |
5896 | 6851 | 8.587952 | AAACATTCAAAAACCGATCTTAAAGG | 57.412 | 30.769 | 0.00 | 0.00 | 0.00 | 3.11 |
5948 | 6903 | 9.881529 | GTACCAATTCAACGTAAAATAGAACAA | 57.118 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
6067 | 7032 | 1.002684 | CCGCCTCGTAACAGCTACTAG | 60.003 | 57.143 | 0.00 | 0.00 | 0.00 | 2.57 |
6068 | 7033 | 1.019673 | CCGCCTCGTAACAGCTACTA | 58.980 | 55.000 | 0.00 | 0.00 | 0.00 | 1.82 |
6069 | 7034 | 1.807886 | CCGCCTCGTAACAGCTACT | 59.192 | 57.895 | 0.00 | 0.00 | 0.00 | 2.57 |
6150 | 7116 | 2.677037 | GCTAGTAACTTCCACGGCACAT | 60.677 | 50.000 | 0.00 | 0.00 | 0.00 | 3.21 |
6152 | 7118 | 1.067071 | AGCTAGTAACTTCCACGGCAC | 60.067 | 52.381 | 0.00 | 0.00 | 0.00 | 5.01 |
6153 | 7119 | 1.203994 | GAGCTAGTAACTTCCACGGCA | 59.796 | 52.381 | 0.00 | 0.00 | 0.00 | 5.69 |
6159 | 7125 | 3.251571 | CACGGTTGAGCTAGTAACTTCC | 58.748 | 50.000 | 7.61 | 0.00 | 0.00 | 3.46 |
6176 | 7148 | 0.594796 | GCAAACAGGAAACAGCACGG | 60.595 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
6178 | 7153 | 0.249447 | GGGCAAACAGGAAACAGCAC | 60.249 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
6197 | 7172 | 9.347934 | TGTAACAAAATAACTGTGAAACACTTG | 57.652 | 29.630 | 0.00 | 0.00 | 45.67 | 3.16 |
6288 | 7263 | 2.743928 | GCCAGTGGACTGAAGGCG | 60.744 | 66.667 | 15.20 | 0.00 | 46.59 | 5.52 |
6389 | 7726 | 7.757097 | ATGCGTGTACTCAAAGTAAGATTAG | 57.243 | 36.000 | 0.00 | 0.00 | 31.62 | 1.73 |
6436 | 7773 | 4.163268 | TGGCATACTCTGTTGCATACCTTA | 59.837 | 41.667 | 0.00 | 0.00 | 40.66 | 2.69 |
6483 | 7820 | 4.696877 | TGCTTTCTCCATGTATGAACAGTG | 59.303 | 41.667 | 0.00 | 0.00 | 39.49 | 3.66 |
6485 | 7822 | 4.095483 | GGTGCTTTCTCCATGTATGAACAG | 59.905 | 45.833 | 0.00 | 0.00 | 39.49 | 3.16 |
6524 | 7861 | 8.086522 | AGTACACGAGTTTACATACAAGACAAT | 58.913 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
6560 | 7898 | 6.352682 | TGAAAGATTTCGACGAAAGAAACA | 57.647 | 33.333 | 25.45 | 17.96 | 39.96 | 2.83 |
6561 | 7899 | 7.069569 | TCATGAAAGATTTCGACGAAAGAAAC | 58.930 | 34.615 | 25.45 | 16.62 | 39.96 | 2.78 |
6562 | 7900 | 7.184800 | TCATGAAAGATTTCGACGAAAGAAA | 57.815 | 32.000 | 25.45 | 5.70 | 41.17 | 2.52 |
6578 | 7916 | 3.863424 | GGCAAGCACATGAATCATGAAAG | 59.137 | 43.478 | 27.86 | 17.42 | 43.81 | 2.62 |
6598 | 7936 | 1.755179 | ATTGCCTGTGTCAGTATGGC | 58.245 | 50.000 | 0.00 | 0.00 | 44.49 | 4.40 |
6697 | 9500 | 5.078949 | TGTCCTGAACAATGACCATGAAAT | 58.921 | 37.500 | 0.00 | 0.00 | 34.03 | 2.17 |
6698 | 9501 | 4.468713 | TGTCCTGAACAATGACCATGAAA | 58.531 | 39.130 | 0.00 | 0.00 | 34.03 | 2.69 |
6705 | 9508 | 5.863935 | GCCTTAATTTGTCCTGAACAATGAC | 59.136 | 40.000 | 0.00 | 0.00 | 46.94 | 3.06 |
6775 | 9598 | 8.677300 | CATACATATAAATAAGAAATGGCGCCT | 58.323 | 33.333 | 29.70 | 7.33 | 0.00 | 5.52 |
6945 | 9782 | 9.739276 | TGTCTTACATTTGTCTAGATCCAAATT | 57.261 | 29.630 | 15.22 | 10.96 | 38.79 | 1.82 |
6947 | 9784 | 9.219603 | CTTGTCTTACATTTGTCTAGATCCAAA | 57.780 | 33.333 | 10.06 | 10.06 | 35.25 | 3.28 |
6948 | 9785 | 8.375506 | ACTTGTCTTACATTTGTCTAGATCCAA | 58.624 | 33.333 | 0.00 | 0.00 | 0.00 | 3.53 |
6949 | 9786 | 7.907389 | ACTTGTCTTACATTTGTCTAGATCCA | 58.093 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
6950 | 9787 | 9.871238 | TTACTTGTCTTACATTTGTCTAGATCC | 57.129 | 33.333 | 0.00 | 0.00 | 0.00 | 3.36 |
6956 | 9793 | 8.576442 | CCCAAATTACTTGTCTTACATTTGTCT | 58.424 | 33.333 | 0.00 | 0.00 | 32.65 | 3.41 |
6958 | 9795 | 8.357402 | GTCCCAAATTACTTGTCTTACATTTGT | 58.643 | 33.333 | 0.00 | 0.00 | 32.65 | 2.83 |
6959 | 9796 | 7.537306 | CGTCCCAAATTACTTGTCTTACATTTG | 59.463 | 37.037 | 0.00 | 0.00 | 32.65 | 2.32 |
6960 | 9797 | 7.308951 | CCGTCCCAAATTACTTGTCTTACATTT | 60.309 | 37.037 | 0.00 | 0.00 | 32.65 | 2.32 |
6961 | 9798 | 6.150474 | CCGTCCCAAATTACTTGTCTTACATT | 59.850 | 38.462 | 0.00 | 0.00 | 32.65 | 2.71 |
6962 | 9799 | 5.646360 | CCGTCCCAAATTACTTGTCTTACAT | 59.354 | 40.000 | 0.00 | 0.00 | 32.65 | 2.29 |
6963 | 9800 | 4.998672 | CCGTCCCAAATTACTTGTCTTACA | 59.001 | 41.667 | 0.00 | 0.00 | 32.65 | 2.41 |
6964 | 9801 | 5.240121 | TCCGTCCCAAATTACTTGTCTTAC | 58.760 | 41.667 | 0.00 | 0.00 | 32.65 | 2.34 |
6965 | 9802 | 5.246656 | TCTCCGTCCCAAATTACTTGTCTTA | 59.753 | 40.000 | 0.00 | 0.00 | 32.65 | 2.10 |
6966 | 9803 | 4.041198 | TCTCCGTCCCAAATTACTTGTCTT | 59.959 | 41.667 | 0.00 | 0.00 | 32.65 | 3.01 |
6967 | 9804 | 3.581332 | TCTCCGTCCCAAATTACTTGTCT | 59.419 | 43.478 | 0.00 | 0.00 | 32.65 | 3.41 |
6968 | 9805 | 3.934068 | TCTCCGTCCCAAATTACTTGTC | 58.066 | 45.455 | 0.00 | 0.00 | 32.65 | 3.18 |
6969 | 9806 | 4.569719 | ATCTCCGTCCCAAATTACTTGT | 57.430 | 40.909 | 0.00 | 0.00 | 32.65 | 3.16 |
6970 | 9807 | 8.848474 | ATATTATCTCCGTCCCAAATTACTTG | 57.152 | 34.615 | 0.00 | 0.00 | 34.52 | 3.16 |
6971 | 9808 | 9.862149 | AAATATTATCTCCGTCCCAAATTACTT | 57.138 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
6997 | 10013 | 9.073475 | GTATGCCCAATTCCAGTTACAATATTA | 57.927 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
6998 | 10014 | 7.784550 | AGTATGCCCAATTCCAGTTACAATATT | 59.215 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
7001 | 10017 | 5.518865 | AGTATGCCCAATTCCAGTTACAAT | 58.481 | 37.500 | 0.00 | 0.00 | 0.00 | 2.71 |
7002 | 10018 | 4.929479 | AGTATGCCCAATTCCAGTTACAA | 58.071 | 39.130 | 0.00 | 0.00 | 0.00 | 2.41 |
7004 | 10020 | 5.417580 | TCAAAGTATGCCCAATTCCAGTTAC | 59.582 | 40.000 | 0.00 | 0.00 | 0.00 | 2.50 |
7005 | 10021 | 5.575157 | TCAAAGTATGCCCAATTCCAGTTA | 58.425 | 37.500 | 0.00 | 0.00 | 0.00 | 2.24 |
7006 | 10022 | 4.415596 | TCAAAGTATGCCCAATTCCAGTT | 58.584 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
7007 | 10023 | 4.019174 | CTCAAAGTATGCCCAATTCCAGT | 58.981 | 43.478 | 0.00 | 0.00 | 0.00 | 4.00 |
7016 | 10040 | 5.299531 | GGAAGTAATTCCTCAAAGTATGCCC | 59.700 | 44.000 | 14.67 | 0.00 | 38.09 | 5.36 |
7020 | 10044 | 7.112779 | CACAGGGAAGTAATTCCTCAAAGTAT | 58.887 | 38.462 | 20.57 | 0.00 | 40.90 | 2.12 |
7024 | 10048 | 5.319043 | ACACAGGGAAGTAATTCCTCAAA | 57.681 | 39.130 | 20.57 | 0.00 | 40.90 | 2.69 |
7040 | 10064 | 6.582636 | ACATGTATGTATAGACCAACACAGG | 58.417 | 40.000 | 0.00 | 0.00 | 39.68 | 4.00 |
7053 | 10077 | 9.098355 | GTGATGTGTACTTTGACATGTATGTAT | 57.902 | 33.333 | 0.00 | 0.00 | 41.95 | 2.29 |
7055 | 10079 | 6.934083 | TGTGATGTGTACTTTGACATGTATGT | 59.066 | 34.615 | 0.00 | 0.00 | 45.16 | 2.29 |
7061 | 10085 | 5.239306 | CCAACTGTGATGTGTACTTTGACAT | 59.761 | 40.000 | 0.00 | 0.00 | 35.46 | 3.06 |
7079 | 10103 | 1.656652 | CTTGCCGTATCCTCCAACTG | 58.343 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
7092 | 10116 | 4.993029 | TGGATAAAAATAACCCTTGCCG | 57.007 | 40.909 | 0.00 | 0.00 | 0.00 | 5.69 |
7104 | 10128 | 4.346418 | ACTGCCAACCATGTTGGATAAAAA | 59.654 | 37.500 | 25.91 | 6.13 | 40.96 | 1.94 |
7128 | 10152 | 2.474816 | GCTTATGGTGACGAGGATCAC | 58.525 | 52.381 | 0.00 | 0.00 | 46.95 | 3.06 |
7134 | 10158 | 2.783828 | AGATCGCTTATGGTGACGAG | 57.216 | 50.000 | 0.00 | 0.00 | 38.04 | 4.18 |
7135 | 10159 | 5.952526 | TTATAGATCGCTTATGGTGACGA | 57.047 | 39.130 | 0.00 | 0.00 | 37.27 | 4.20 |
7244 | 10282 | 2.167900 | AGGTTCTAGCATTACACCGGAC | 59.832 | 50.000 | 9.46 | 0.00 | 32.32 | 4.79 |
7259 | 10297 | 4.811557 | GCGCTTCATTACTCAATAGGTTCT | 59.188 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
7263 | 10301 | 4.626042 | AGAGCGCTTCATTACTCAATAGG | 58.374 | 43.478 | 13.26 | 0.00 | 0.00 | 2.57 |
7276 | 10314 | 2.223363 | GGCTTTTTCCATAGAGCGCTTC | 60.223 | 50.000 | 13.26 | 4.88 | 36.02 | 3.86 |
7278 | 10316 | 1.065126 | AGGCTTTTTCCATAGAGCGCT | 60.065 | 47.619 | 11.27 | 11.27 | 36.02 | 5.92 |
7288 | 10328 | 4.212004 | GCAAGTTTTCATGAGGCTTTTTCC | 59.788 | 41.667 | 0.00 | 0.00 | 0.00 | 3.13 |
7290 | 10330 | 4.812626 | CAGCAAGTTTTCATGAGGCTTTTT | 59.187 | 37.500 | 0.00 | 0.00 | 0.00 | 1.94 |
7306 | 10346 | 9.822185 | AATTTTAACTTCAAATTCTCAGCAAGT | 57.178 | 25.926 | 0.00 | 0.00 | 29.50 | 3.16 |
7337 | 10379 | 3.085533 | TGCATGCCCACGTTATTACTTT | 58.914 | 40.909 | 16.68 | 0.00 | 0.00 | 2.66 |
7340 | 10382 | 2.616376 | TCATGCATGCCCACGTTATTAC | 59.384 | 45.455 | 22.25 | 0.00 | 0.00 | 1.89 |
7347 | 10389 | 1.985447 | GACACTCATGCATGCCCACG | 61.985 | 60.000 | 22.25 | 10.30 | 0.00 | 4.94 |
7350 | 10392 | 0.966875 | TTGGACACTCATGCATGCCC | 60.967 | 55.000 | 22.25 | 15.98 | 0.00 | 5.36 |
7377 | 10419 | 7.220741 | TGCAAAAGTATATTAACAGGTTGCA | 57.779 | 32.000 | 3.31 | 3.31 | 44.58 | 4.08 |
7381 | 10423 | 8.621286 | GTGCTATGCAAAAGTATATTAACAGGT | 58.379 | 33.333 | 0.00 | 0.00 | 41.47 | 4.00 |
7391 | 10433 | 4.766891 | ACCTGTTGTGCTATGCAAAAGTAT | 59.233 | 37.500 | 0.00 | 0.00 | 41.47 | 2.12 |
7394 | 10436 | 3.004629 | TGACCTGTTGTGCTATGCAAAAG | 59.995 | 43.478 | 0.00 | 0.00 | 41.47 | 2.27 |
7395 | 10437 | 2.954989 | TGACCTGTTGTGCTATGCAAAA | 59.045 | 40.909 | 0.00 | 0.00 | 41.47 | 2.44 |
7399 | 10444 | 1.734465 | GACTGACCTGTTGTGCTATGC | 59.266 | 52.381 | 0.00 | 0.00 | 0.00 | 3.14 |
7416 | 10461 | 1.745232 | TCAAGTTTTGCACACGGACT | 58.255 | 45.000 | 0.00 | 0.00 | 0.00 | 3.85 |
7421 | 10466 | 5.173854 | GCTCTTACATTCAAGTTTTGCACAC | 59.826 | 40.000 | 0.00 | 0.00 | 0.00 | 3.82 |
7429 | 10474 | 5.376625 | TGGAGTTGCTCTTACATTCAAGTT | 58.623 | 37.500 | 0.00 | 0.00 | 0.00 | 2.66 |
7435 | 10480 | 4.074970 | CCTGTTGGAGTTGCTCTTACATT | 58.925 | 43.478 | 0.00 | 0.00 | 34.57 | 2.71 |
7436 | 10481 | 3.560025 | CCCTGTTGGAGTTGCTCTTACAT | 60.560 | 47.826 | 0.00 | 0.00 | 35.39 | 2.29 |
7437 | 10482 | 2.224523 | CCCTGTTGGAGTTGCTCTTACA | 60.225 | 50.000 | 0.00 | 0.00 | 35.39 | 2.41 |
7438 | 10483 | 2.427506 | CCCTGTTGGAGTTGCTCTTAC | 58.572 | 52.381 | 0.00 | 0.00 | 35.39 | 2.34 |
7439 | 10484 | 1.271379 | GCCCTGTTGGAGTTGCTCTTA | 60.271 | 52.381 | 0.00 | 0.00 | 35.39 | 2.10 |
7440 | 10485 | 0.538287 | GCCCTGTTGGAGTTGCTCTT | 60.538 | 55.000 | 0.00 | 0.00 | 35.39 | 2.85 |
7441 | 10486 | 1.073897 | GCCCTGTTGGAGTTGCTCT | 59.926 | 57.895 | 0.00 | 0.00 | 35.39 | 4.09 |
7442 | 10487 | 1.973812 | GGCCCTGTTGGAGTTGCTC | 60.974 | 63.158 | 0.00 | 0.00 | 35.39 | 4.26 |
7443 | 10488 | 2.116125 | GGCCCTGTTGGAGTTGCT | 59.884 | 61.111 | 0.00 | 0.00 | 35.39 | 3.91 |
7444 | 10489 | 2.203480 | TGGCCCTGTTGGAGTTGC | 60.203 | 61.111 | 0.00 | 0.00 | 35.39 | 4.17 |
7445 | 10490 | 1.903404 | GGTGGCCCTGTTGGAGTTG | 60.903 | 63.158 | 0.00 | 0.00 | 35.39 | 3.16 |
7446 | 10491 | 2.520968 | GGTGGCCCTGTTGGAGTT | 59.479 | 61.111 | 0.00 | 0.00 | 35.39 | 3.01 |
7447 | 10492 | 3.580319 | GGGTGGCCCTGTTGGAGT | 61.580 | 66.667 | 0.00 | 0.00 | 41.34 | 3.85 |
7448 | 10493 | 2.445492 | AATGGGTGGCCCTGTTGGAG | 62.445 | 60.000 | 0.00 | 0.00 | 45.70 | 3.86 |
7449 | 10494 | 2.029892 | AAATGGGTGGCCCTGTTGGA | 62.030 | 55.000 | 0.00 | 0.00 | 45.70 | 3.53 |
7450 | 10495 | 1.536174 | AAATGGGTGGCCCTGTTGG | 60.536 | 57.895 | 0.00 | 0.00 | 45.70 | 3.77 |
7451 | 10496 | 1.876497 | CGAAATGGGTGGCCCTGTTG | 61.876 | 60.000 | 0.00 | 0.00 | 45.70 | 3.33 |
7452 | 10497 | 1.606313 | CGAAATGGGTGGCCCTGTT | 60.606 | 57.895 | 0.00 | 0.00 | 45.70 | 3.16 |
7453 | 10498 | 2.035626 | CGAAATGGGTGGCCCTGT | 59.964 | 61.111 | 0.00 | 0.00 | 45.70 | 4.00 |
7454 | 10499 | 2.035626 | ACGAAATGGGTGGCCCTG | 59.964 | 61.111 | 0.00 | 0.00 | 45.70 | 4.45 |
7455 | 10500 | 2.355115 | GACGAAATGGGTGGCCCT | 59.645 | 61.111 | 0.00 | 0.00 | 45.70 | 5.19 |
7456 | 10501 | 2.754254 | GGACGAAATGGGTGGCCC | 60.754 | 66.667 | 0.00 | 0.00 | 45.71 | 5.80 |
7457 | 10502 | 3.131478 | CGGACGAAATGGGTGGCC | 61.131 | 66.667 | 0.00 | 0.00 | 0.00 | 5.36 |
7458 | 10503 | 3.810896 | GCGGACGAAATGGGTGGC | 61.811 | 66.667 | 0.00 | 0.00 | 0.00 | 5.01 |
7459 | 10504 | 2.046314 | AGCGGACGAAATGGGTGG | 60.046 | 61.111 | 0.00 | 0.00 | 0.00 | 4.61 |
7460 | 10505 | 2.398554 | CCAGCGGACGAAATGGGTG | 61.399 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
7461 | 10506 | 2.046314 | CCAGCGGACGAAATGGGT | 60.046 | 61.111 | 0.00 | 0.00 | 0.00 | 4.51 |
7462 | 10507 | 3.508840 | GCCAGCGGACGAAATGGG | 61.509 | 66.667 | 11.26 | 0.00 | 33.23 | 4.00 |
7463 | 10508 | 3.864686 | CGCCAGCGGACGAAATGG | 61.865 | 66.667 | 3.61 | 1.37 | 35.56 | 3.16 |
7464 | 10509 | 3.083600 | GACGCCAGCGGACGAAATG | 62.084 | 63.158 | 17.33 | 0.00 | 44.69 | 2.32 |
7465 | 10510 | 2.813908 | GACGCCAGCGGACGAAAT | 60.814 | 61.111 | 17.33 | 0.00 | 44.69 | 2.17 |
7475 | 10520 | 3.047877 | GACCCAAACGGACGCCAG | 61.048 | 66.667 | 0.00 | 0.00 | 34.64 | 4.85 |
7476 | 10521 | 4.973055 | CGACCCAAACGGACGCCA | 62.973 | 66.667 | 0.00 | 0.00 | 42.69 | 5.69 |
7490 | 10535 | 3.573489 | CTTTTGTGTCCGCGCCGAC | 62.573 | 63.158 | 20.04 | 20.04 | 0.00 | 4.79 |
7491 | 10536 | 3.342627 | CTTTTGTGTCCGCGCCGA | 61.343 | 61.111 | 0.00 | 0.00 | 0.00 | 5.54 |
7492 | 10537 | 3.573489 | GACTTTTGTGTCCGCGCCG | 62.573 | 63.158 | 0.00 | 0.00 | 0.00 | 6.46 |
7493 | 10538 | 2.251371 | GACTTTTGTGTCCGCGCC | 59.749 | 61.111 | 0.00 | 0.00 | 0.00 | 6.53 |
7494 | 10539 | 2.127758 | CGACTTTTGTGTCCGCGC | 60.128 | 61.111 | 0.00 | 0.00 | 33.70 | 6.86 |
7495 | 10540 | 2.549282 | CCGACTTTTGTGTCCGCG | 59.451 | 61.111 | 0.00 | 0.00 | 33.70 | 6.46 |
7496 | 10541 | 2.251371 | GCCGACTTTTGTGTCCGC | 59.749 | 61.111 | 0.00 | 0.00 | 35.04 | 5.54 |
7497 | 10542 | 2.613506 | GGGCCGACTTTTGTGTCCG | 61.614 | 63.158 | 0.00 | 0.00 | 33.70 | 4.79 |
7498 | 10543 | 1.104577 | TTGGGCCGACTTTTGTGTCC | 61.105 | 55.000 | 0.00 | 0.00 | 33.70 | 4.02 |
7499 | 10544 | 0.030235 | GTTGGGCCGACTTTTGTGTC | 59.970 | 55.000 | 17.07 | 0.00 | 0.00 | 3.67 |
7500 | 10545 | 1.720694 | CGTTGGGCCGACTTTTGTGT | 61.721 | 55.000 | 21.44 | 0.00 | 0.00 | 3.72 |
7501 | 10546 | 1.008995 | CGTTGGGCCGACTTTTGTG | 60.009 | 57.895 | 21.44 | 1.08 | 0.00 | 3.33 |
7502 | 10547 | 2.841160 | GCGTTGGGCCGACTTTTGT | 61.841 | 57.895 | 21.44 | 0.00 | 34.80 | 2.83 |
7503 | 10548 | 2.050442 | GCGTTGGGCCGACTTTTG | 60.050 | 61.111 | 21.44 | 7.22 | 34.80 | 2.44 |
7504 | 10549 | 3.656045 | CGCGTTGGGCCGACTTTT | 61.656 | 61.111 | 21.44 | 0.00 | 38.94 | 2.27 |
7514 | 10559 | 3.955101 | TTTTGGTCGGCGCGTTGG | 61.955 | 61.111 | 8.43 | 0.00 | 0.00 | 3.77 |
7515 | 10560 | 2.724358 | GTTTTGGTCGGCGCGTTG | 60.724 | 61.111 | 8.43 | 0.00 | 0.00 | 4.10 |
7516 | 10561 | 4.302172 | CGTTTTGGTCGGCGCGTT | 62.302 | 61.111 | 8.43 | 0.00 | 0.00 | 4.84 |
7519 | 10564 | 4.379143 | GTCCGTTTTGGTCGGCGC | 62.379 | 66.667 | 0.00 | 0.00 | 46.49 | 6.53 |
7520 | 10565 | 4.067016 | CGTCCGTTTTGGTCGGCG | 62.067 | 66.667 | 0.00 | 0.00 | 46.49 | 6.46 |
7524 | 10569 | 2.247267 | CGTGCGTCCGTTTTGGTC | 59.753 | 61.111 | 0.00 | 0.00 | 39.52 | 4.02 |
7525 | 10570 | 2.512057 | ACGTGCGTCCGTTTTGGT | 60.512 | 55.556 | 0.00 | 0.00 | 37.96 | 3.67 |
7526 | 10571 | 2.247267 | GACGTGCGTCCGTTTTGG | 59.753 | 61.111 | 13.11 | 0.00 | 41.98 | 3.28 |
7534 | 10579 | 3.764049 | GACAAGCGGACGTGCGTC | 61.764 | 66.667 | 29.81 | 21.29 | 43.87 | 5.19 |
7537 | 10582 | 3.764049 | GACGACAAGCGGACGTGC | 61.764 | 66.667 | 12.56 | 0.00 | 46.49 | 5.34 |
7538 | 10583 | 3.103911 | GGACGACAAGCGGACGTG | 61.104 | 66.667 | 12.56 | 0.00 | 46.49 | 4.49 |
7539 | 10584 | 3.598715 | TGGACGACAAGCGGACGT | 61.599 | 61.111 | 8.37 | 8.37 | 46.49 | 4.34 |
7540 | 10585 | 3.103911 | GTGGACGACAAGCGGACG | 61.104 | 66.667 | 0.00 | 2.38 | 46.49 | 4.79 |
7541 | 10586 | 2.737376 | GGTGGACGACAAGCGGAC | 60.737 | 66.667 | 0.00 | 0.00 | 46.49 | 4.79 |
7542 | 10587 | 2.915659 | AGGTGGACGACAAGCGGA | 60.916 | 61.111 | 0.00 | 0.00 | 46.49 | 5.54 |
7543 | 10588 | 2.738521 | CAGGTGGACGACAAGCGG | 60.739 | 66.667 | 0.00 | 0.00 | 46.49 | 5.52 |
7545 | 10590 | 3.050275 | GGCAGGTGGACGACAAGC | 61.050 | 66.667 | 0.00 | 0.00 | 0.00 | 4.01 |
7546 | 10591 | 1.227823 | TTGGCAGGTGGACGACAAG | 60.228 | 57.895 | 0.00 | 0.00 | 0.00 | 3.16 |
7547 | 10592 | 1.525077 | GTTGGCAGGTGGACGACAA | 60.525 | 57.895 | 0.00 | 0.00 | 38.95 | 3.18 |
7548 | 10593 | 2.110213 | GTTGGCAGGTGGACGACA | 59.890 | 61.111 | 0.00 | 0.00 | 38.95 | 4.35 |
7549 | 10594 | 2.668550 | GGTTGGCAGGTGGACGAC | 60.669 | 66.667 | 0.00 | 0.00 | 38.31 | 4.34 |
7550 | 10595 | 3.948719 | GGGTTGGCAGGTGGACGA | 61.949 | 66.667 | 0.00 | 0.00 | 0.00 | 4.20 |
7551 | 10596 | 3.567579 | ATGGGTTGGCAGGTGGACG | 62.568 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
7552 | 10597 | 0.831711 | AAATGGGTTGGCAGGTGGAC | 60.832 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
7553 | 10598 | 0.541764 | GAAATGGGTTGGCAGGTGGA | 60.542 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
7554 | 10599 | 1.543944 | GGAAATGGGTTGGCAGGTGG | 61.544 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
7555 | 10600 | 1.876497 | CGGAAATGGGTTGGCAGGTG | 61.876 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
7556 | 10601 | 1.606313 | CGGAAATGGGTTGGCAGGT | 60.606 | 57.895 | 0.00 | 0.00 | 0.00 | 4.00 |
7557 | 10602 | 2.350458 | CCGGAAATGGGTTGGCAGG | 61.350 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
7558 | 10603 | 3.005540 | GCCGGAAATGGGTTGGCAG | 62.006 | 63.158 | 5.05 | 0.00 | 45.06 | 4.85 |
7559 | 10604 | 2.994417 | GCCGGAAATGGGTTGGCA | 60.994 | 61.111 | 5.05 | 0.00 | 45.06 | 4.92 |
7560 | 10605 | 3.770040 | GGCCGGAAATGGGTTGGC | 61.770 | 66.667 | 5.05 | 0.00 | 44.98 | 4.52 |
7561 | 10606 | 3.074369 | GGGCCGGAAATGGGTTGG | 61.074 | 66.667 | 5.05 | 0.00 | 0.00 | 3.77 |
7562 | 10607 | 1.264045 | AATGGGCCGGAAATGGGTTG | 61.264 | 55.000 | 5.05 | 0.00 | 0.00 | 3.77 |
7563 | 10608 | 0.546507 | AAATGGGCCGGAAATGGGTT | 60.547 | 50.000 | 5.05 | 0.00 | 0.00 | 4.11 |
7564 | 10609 | 0.546507 | AAAATGGGCCGGAAATGGGT | 60.547 | 50.000 | 5.05 | 0.00 | 0.00 | 4.51 |
7565 | 10610 | 0.617935 | AAAAATGGGCCGGAAATGGG | 59.382 | 50.000 | 5.05 | 0.00 | 0.00 | 4.00 |
7566 | 10611 | 1.277557 | TCAAAAATGGGCCGGAAATGG | 59.722 | 47.619 | 5.05 | 0.00 | 0.00 | 3.16 |
7567 | 10612 | 2.620242 | CTCAAAAATGGGCCGGAAATG | 58.380 | 47.619 | 5.05 | 0.00 | 0.00 | 2.32 |
7568 | 10613 | 1.066215 | GCTCAAAAATGGGCCGGAAAT | 60.066 | 47.619 | 5.05 | 0.00 | 0.00 | 2.17 |
7569 | 10614 | 0.320050 | GCTCAAAAATGGGCCGGAAA | 59.680 | 50.000 | 5.05 | 0.00 | 0.00 | 3.13 |
7570 | 10615 | 1.540435 | GGCTCAAAAATGGGCCGGAA | 61.540 | 55.000 | 5.05 | 0.00 | 35.08 | 4.30 |
7571 | 10616 | 1.981853 | GGCTCAAAAATGGGCCGGA | 60.982 | 57.895 | 5.05 | 0.00 | 35.08 | 5.14 |
7572 | 10617 | 2.578664 | GGCTCAAAAATGGGCCGG | 59.421 | 61.111 | 3.61 | 0.00 | 35.08 | 6.13 |
7574 | 10619 | 1.329913 | ATCCGGCTCAAAAATGGGCC | 61.330 | 55.000 | 9.70 | 9.70 | 41.02 | 5.80 |
7575 | 10620 | 0.536724 | AATCCGGCTCAAAAATGGGC | 59.463 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
7576 | 10621 | 2.620242 | CAAATCCGGCTCAAAAATGGG | 58.380 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
7577 | 10622 | 2.001872 | GCAAATCCGGCTCAAAAATGG | 58.998 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
7578 | 10623 | 1.655099 | CGCAAATCCGGCTCAAAAATG | 59.345 | 47.619 | 0.00 | 0.00 | 0.00 | 2.32 |
7579 | 10624 | 1.272212 | ACGCAAATCCGGCTCAAAAAT | 59.728 | 42.857 | 0.00 | 0.00 | 0.00 | 1.82 |
7580 | 10625 | 0.671251 | ACGCAAATCCGGCTCAAAAA | 59.329 | 45.000 | 0.00 | 0.00 | 0.00 | 1.94 |
7581 | 10626 | 0.239879 | GACGCAAATCCGGCTCAAAA | 59.760 | 50.000 | 0.00 | 0.00 | 32.31 | 2.44 |
7582 | 10627 | 1.873165 | GACGCAAATCCGGCTCAAA | 59.127 | 52.632 | 0.00 | 0.00 | 32.31 | 2.69 |
7583 | 10628 | 2.387445 | CGACGCAAATCCGGCTCAA | 61.387 | 57.895 | 0.00 | 0.00 | 33.03 | 3.02 |
7584 | 10629 | 2.813474 | CGACGCAAATCCGGCTCA | 60.813 | 61.111 | 0.00 | 0.00 | 33.03 | 4.26 |
7585 | 10630 | 3.564027 | CCGACGCAAATCCGGCTC | 61.564 | 66.667 | 0.00 | 0.00 | 36.62 | 4.70 |
7597 | 10642 | 2.880879 | CTCGTGTCCATGCCGACG | 60.881 | 66.667 | 0.00 | 0.00 | 35.40 | 5.12 |
7598 | 10643 | 2.509336 | CCTCGTGTCCATGCCGAC | 60.509 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
7599 | 10644 | 4.451150 | GCCTCGTGTCCATGCCGA | 62.451 | 66.667 | 0.00 | 0.00 | 0.00 | 5.54 |
7602 | 10647 | 4.451150 | TCCGCCTCGTGTCCATGC | 62.451 | 66.667 | 0.00 | 0.00 | 0.00 | 4.06 |
7603 | 10648 | 2.509336 | GTCCGCCTCGTGTCCATG | 60.509 | 66.667 | 0.00 | 0.00 | 0.00 | 3.66 |
7604 | 10649 | 4.129737 | CGTCCGCCTCGTGTCCAT | 62.130 | 66.667 | 0.00 | 0.00 | 0.00 | 3.41 |
7625 | 10670 | 3.491652 | GAAGGAGAAGGTGCGCGC | 61.492 | 66.667 | 27.26 | 27.26 | 0.00 | 6.86 |
7626 | 10671 | 2.815647 | GGAAGGAGAAGGTGCGCG | 60.816 | 66.667 | 0.00 | 0.00 | 0.00 | 6.86 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.