Multiple sequence alignment - TraesCS6B01G391800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G391800 chr6B 100.000 2786 0 0 1 2786 666773485 666776270 0.000000e+00 5145.0
1 TraesCS6B01G391800 chr6D 93.818 1828 95 10 235 2054 441525046 441526863 0.000000e+00 2734.0
2 TraesCS6B01G391800 chr6D 94.402 393 20 2 2226 2616 441534772 441535164 1.100000e-168 603.0
3 TraesCS6B01G391800 chr6D 80.034 591 110 8 892 1477 441291265 441291852 5.510000e-117 431.0
4 TraesCS6B01G391800 chr6D 78.648 651 122 12 882 1529 441316743 441317379 1.540000e-112 416.0
5 TraesCS6B01G391800 chr6D 78.648 651 122 12 882 1529 441397605 441398241 1.540000e-112 416.0
6 TraesCS6B01G391800 chr6D 88.626 211 7 8 2045 2238 441526884 441527094 9.970000e-60 241.0
7 TraesCS6B01G391800 chr6D 82.174 230 35 5 882 1109 441098647 441098872 2.830000e-45 193.0
8 TraesCS6B01G391800 chr6A 93.736 1836 89 13 235 2060 590043235 590045054 0.000000e+00 2730.0
9 TraesCS6B01G391800 chr6A 89.326 534 27 8 2086 2616 590045330 590045836 0.000000e+00 643.0
10 TraesCS6B01G391800 chr6A 79.035 601 118 8 882 1477 589175230 589175827 3.340000e-109 405.0
11 TraesCS6B01G391800 chr6A 78.869 601 119 8 882 1477 589192434 589191837 1.550000e-107 399.0
12 TraesCS6B01G391800 chr3A 84.926 471 69 2 994 1463 552434316 552434785 2.510000e-130 475.0
13 TraesCS6B01G391800 chr1B 81.818 88 7 8 2651 2734 2561561 2561479 6.440000e-07 65.8
14 TraesCS6B01G391800 chr1B 80.682 88 9 7 2651 2734 2622305 2622222 8.330000e-06 62.1
15 TraesCS6B01G391800 chr2D 94.118 34 2 0 2497 2530 402554112 402554145 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G391800 chr6B 666773485 666776270 2785 False 5145.0 5145 100.000 1 2786 1 chr6B.!!$F1 2785
1 TraesCS6B01G391800 chr6D 441525046 441527094 2048 False 1487.5 2734 91.222 235 2238 2 chr6D.!!$F6 2003
2 TraesCS6B01G391800 chr6D 441291265 441291852 587 False 431.0 431 80.034 892 1477 1 chr6D.!!$F2 585
3 TraesCS6B01G391800 chr6D 441316743 441317379 636 False 416.0 416 78.648 882 1529 1 chr6D.!!$F3 647
4 TraesCS6B01G391800 chr6D 441397605 441398241 636 False 416.0 416 78.648 882 1529 1 chr6D.!!$F4 647
5 TraesCS6B01G391800 chr6A 590043235 590045836 2601 False 1686.5 2730 91.531 235 2616 2 chr6A.!!$F2 2381
6 TraesCS6B01G391800 chr6A 589175230 589175827 597 False 405.0 405 79.035 882 1477 1 chr6A.!!$F1 595
7 TraesCS6B01G391800 chr6A 589191837 589192434 597 True 399.0 399 78.869 882 1477 1 chr6A.!!$R1 595

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
83 84 0.030908 GGCTACTCGCGCAGACTTAT 59.969 55.0 8.75 0.00 40.44 1.73 F
215 216 0.106708 TGAGATGCCCGTAATGCTCC 59.893 55.0 0.00 0.00 0.00 4.70 F
288 291 0.179225 GACAGCAACAACGCGGTATG 60.179 55.0 12.47 8.04 40.53 2.39 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1592 1608 0.038744 CCAGCCCTCCTGATGTTGTT 59.961 55.000 0.00 0.00 44.64 2.83 R
1648 1664 1.021390 CCACCGTAAAGCAGCTGAGG 61.021 60.000 20.43 12.03 0.00 3.86 R
1815 1832 1.608025 GCGGCCGGAGATGAAATGATA 60.608 52.381 29.38 0.00 0.00 2.15 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.453983 ATTTTTGGCCGTTGATGGTG 57.546 45.000 0.00 0.00 0.00 4.17
20 21 1.403814 TTTTTGGCCGTTGATGGTGA 58.596 45.000 0.00 0.00 0.00 4.02
21 22 1.403814 TTTTGGCCGTTGATGGTGAA 58.596 45.000 0.00 0.00 0.00 3.18
22 23 1.403814 TTTGGCCGTTGATGGTGAAA 58.596 45.000 0.00 0.00 0.00 2.69
23 24 1.403814 TTGGCCGTTGATGGTGAAAA 58.596 45.000 0.00 0.00 0.00 2.29
24 25 1.403814 TGGCCGTTGATGGTGAAAAA 58.596 45.000 0.00 0.00 0.00 1.94
54 55 9.968870 TTGTTTAATTGGGTGTCTATTACAAAC 57.031 29.630 0.00 0.00 40.63 2.93
55 56 9.132923 TGTTTAATTGGGTGTCTATTACAAACA 57.867 29.630 0.00 0.00 40.63 2.83
56 57 9.968870 GTTTAATTGGGTGTCTATTACAAACAA 57.031 29.630 0.00 0.00 40.63 2.83
57 58 9.968870 TTTAATTGGGTGTCTATTACAAACAAC 57.031 29.630 0.00 0.00 40.63 3.32
58 59 5.676532 TTGGGTGTCTATTACAAACAACG 57.323 39.130 0.00 0.00 40.63 4.10
59 60 4.706035 TGGGTGTCTATTACAAACAACGT 58.294 39.130 0.00 0.00 40.63 3.99
60 61 5.124645 TGGGTGTCTATTACAAACAACGTT 58.875 37.500 0.00 0.00 40.63 3.99
61 62 5.236911 TGGGTGTCTATTACAAACAACGTTC 59.763 40.000 0.00 0.00 40.63 3.95
62 63 5.236911 GGGTGTCTATTACAAACAACGTTCA 59.763 40.000 0.00 0.00 40.63 3.18
63 64 6.072893 GGGTGTCTATTACAAACAACGTTCAT 60.073 38.462 0.00 0.00 40.63 2.57
64 65 6.795114 GGTGTCTATTACAAACAACGTTCATG 59.205 38.462 0.00 0.00 40.63 3.07
65 66 6.795114 GTGTCTATTACAAACAACGTTCATGG 59.205 38.462 0.00 0.00 40.63 3.66
66 67 5.793457 GTCTATTACAAACAACGTTCATGGC 59.207 40.000 0.00 0.00 0.00 4.40
67 68 4.846779 ATTACAAACAACGTTCATGGCT 57.153 36.364 0.00 0.00 0.00 4.75
68 69 5.950758 ATTACAAACAACGTTCATGGCTA 57.049 34.783 0.00 0.00 0.00 3.93
69 70 3.619233 ACAAACAACGTTCATGGCTAC 57.381 42.857 0.00 0.00 0.00 3.58
70 71 3.211045 ACAAACAACGTTCATGGCTACT 58.789 40.909 0.00 0.00 0.00 2.57
71 72 3.250040 ACAAACAACGTTCATGGCTACTC 59.750 43.478 0.00 0.00 0.00 2.59
72 73 1.710013 ACAACGTTCATGGCTACTCG 58.290 50.000 0.00 0.00 0.00 4.18
73 74 0.370273 CAACGTTCATGGCTACTCGC 59.630 55.000 0.00 0.00 38.13 5.03
74 75 1.076533 AACGTTCATGGCTACTCGCG 61.077 55.000 0.00 0.00 40.44 5.87
75 76 2.860628 CGTTCATGGCTACTCGCGC 61.861 63.158 0.00 0.00 40.44 6.86
76 77 1.809619 GTTCATGGCTACTCGCGCA 60.810 57.895 8.75 0.00 40.44 6.09
77 78 1.519234 TTCATGGCTACTCGCGCAG 60.519 57.895 8.75 6.77 40.44 5.18
78 79 1.944234 TTCATGGCTACTCGCGCAGA 61.944 55.000 8.75 4.86 40.44 4.26
79 80 2.105128 ATGGCTACTCGCGCAGAC 59.895 61.111 8.75 0.00 40.44 3.51
80 81 2.418910 ATGGCTACTCGCGCAGACT 61.419 57.895 8.75 0.00 40.44 3.24
81 82 1.949847 ATGGCTACTCGCGCAGACTT 61.950 55.000 8.75 0.00 40.44 3.01
82 83 1.310216 TGGCTACTCGCGCAGACTTA 61.310 55.000 8.75 0.00 40.44 2.24
83 84 0.030908 GGCTACTCGCGCAGACTTAT 59.969 55.000 8.75 0.00 40.44 1.73
84 85 1.536284 GGCTACTCGCGCAGACTTATT 60.536 52.381 8.75 0.00 40.44 1.40
85 86 1.518929 GCTACTCGCGCAGACTTATTG 59.481 52.381 8.75 0.00 0.00 1.90
86 87 2.798680 CTACTCGCGCAGACTTATTGT 58.201 47.619 8.75 1.85 0.00 2.71
87 88 2.080286 ACTCGCGCAGACTTATTGTT 57.920 45.000 8.75 0.00 0.00 2.83
88 89 3.226346 ACTCGCGCAGACTTATTGTTA 57.774 42.857 8.75 0.00 0.00 2.41
89 90 2.921754 ACTCGCGCAGACTTATTGTTAC 59.078 45.455 8.75 0.00 0.00 2.50
90 91 1.915350 TCGCGCAGACTTATTGTTACG 59.085 47.619 8.75 0.00 0.00 3.18
91 92 1.006391 CGCGCAGACTTATTGTTACGG 60.006 52.381 8.75 0.00 0.00 4.02
92 93 2.264813 GCGCAGACTTATTGTTACGGA 58.735 47.619 0.30 0.00 0.00 4.69
93 94 2.669434 GCGCAGACTTATTGTTACGGAA 59.331 45.455 0.30 0.00 0.00 4.30
94 95 3.308866 GCGCAGACTTATTGTTACGGAAT 59.691 43.478 0.30 0.00 0.00 3.01
95 96 4.550255 GCGCAGACTTATTGTTACGGAATC 60.550 45.833 0.30 0.00 0.00 2.52
96 97 4.565166 CGCAGACTTATTGTTACGGAATCA 59.435 41.667 0.00 0.00 0.00 2.57
97 98 5.062934 CGCAGACTTATTGTTACGGAATCAA 59.937 40.000 0.00 0.00 0.00 2.57
98 99 6.248631 GCAGACTTATTGTTACGGAATCAAC 58.751 40.000 0.00 0.00 0.00 3.18
99 100 6.128391 GCAGACTTATTGTTACGGAATCAACA 60.128 38.462 0.00 0.00 32.98 3.33
100 101 7.456253 CAGACTTATTGTTACGGAATCAACAG 58.544 38.462 0.00 0.00 36.13 3.16
101 102 7.330946 CAGACTTATTGTTACGGAATCAACAGA 59.669 37.037 9.08 0.00 36.13 3.41
102 103 7.331193 AGACTTATTGTTACGGAATCAACAGAC 59.669 37.037 9.08 5.31 36.13 3.51
103 104 7.159372 ACTTATTGTTACGGAATCAACAGACT 58.841 34.615 9.08 0.00 36.13 3.24
104 105 5.862924 ATTGTTACGGAATCAACAGACTG 57.137 39.130 0.00 0.00 36.13 3.51
105 106 4.330944 TGTTACGGAATCAACAGACTGT 57.669 40.909 1.07 1.07 31.29 3.55
106 107 5.456548 TGTTACGGAATCAACAGACTGTA 57.543 39.130 8.91 0.00 31.29 2.74
107 108 5.845103 TGTTACGGAATCAACAGACTGTAA 58.155 37.500 8.91 0.47 33.56 2.41
108 109 6.460781 TGTTACGGAATCAACAGACTGTAAT 58.539 36.000 8.91 3.07 36.78 1.89
109 110 6.932400 TGTTACGGAATCAACAGACTGTAATT 59.068 34.615 8.91 11.64 36.78 1.40
110 111 8.089597 TGTTACGGAATCAACAGACTGTAATTA 58.910 33.333 8.91 0.00 36.78 1.40
111 112 8.592998 GTTACGGAATCAACAGACTGTAATTAG 58.407 37.037 8.91 11.22 36.78 1.73
112 113 6.106673 ACGGAATCAACAGACTGTAATTAGG 58.893 40.000 8.91 9.33 0.00 2.69
113 114 6.106673 CGGAATCAACAGACTGTAATTAGGT 58.893 40.000 8.91 0.00 0.00 3.08
114 115 6.036083 CGGAATCAACAGACTGTAATTAGGTG 59.964 42.308 8.91 1.58 0.00 4.00
115 116 6.316390 GGAATCAACAGACTGTAATTAGGTGG 59.684 42.308 8.91 0.00 0.00 4.61
116 117 5.818678 TCAACAGACTGTAATTAGGTGGT 57.181 39.130 8.91 0.00 0.00 4.16
117 118 6.921486 TCAACAGACTGTAATTAGGTGGTA 57.079 37.500 8.91 0.00 0.00 3.25
118 119 6.931838 TCAACAGACTGTAATTAGGTGGTAG 58.068 40.000 8.91 0.00 0.00 3.18
119 120 6.495872 TCAACAGACTGTAATTAGGTGGTAGT 59.504 38.462 8.91 0.00 0.00 2.73
120 121 6.930068 ACAGACTGTAATTAGGTGGTAGTT 57.070 37.500 6.24 0.00 0.00 2.24
121 122 7.312415 ACAGACTGTAATTAGGTGGTAGTTT 57.688 36.000 6.24 0.00 0.00 2.66
122 123 7.742767 ACAGACTGTAATTAGGTGGTAGTTTT 58.257 34.615 6.24 0.00 0.00 2.43
123 124 8.215736 ACAGACTGTAATTAGGTGGTAGTTTTT 58.784 33.333 6.24 0.00 0.00 1.94
145 146 5.677319 TTTACTGGTGATTAGGAGTGAGG 57.323 43.478 0.00 0.00 0.00 3.86
146 147 3.191888 ACTGGTGATTAGGAGTGAGGT 57.808 47.619 0.00 0.00 0.00 3.85
147 148 2.834549 ACTGGTGATTAGGAGTGAGGTG 59.165 50.000 0.00 0.00 0.00 4.00
148 149 2.169352 CTGGTGATTAGGAGTGAGGTGG 59.831 54.545 0.00 0.00 0.00 4.61
149 150 2.188817 GGTGATTAGGAGTGAGGTGGT 58.811 52.381 0.00 0.00 0.00 4.16
150 151 2.093447 GGTGATTAGGAGTGAGGTGGTG 60.093 54.545 0.00 0.00 0.00 4.17
151 152 1.555075 TGATTAGGAGTGAGGTGGTGC 59.445 52.381 0.00 0.00 0.00 5.01
152 153 0.912486 ATTAGGAGTGAGGTGGTGCC 59.088 55.000 0.00 0.00 37.58 5.01
153 154 1.198759 TTAGGAGTGAGGTGGTGCCC 61.199 60.000 0.00 0.00 38.26 5.36
154 155 2.395180 TAGGAGTGAGGTGGTGCCCA 62.395 60.000 0.00 0.00 38.26 5.36
164 165 2.119391 GGTGCCCACCCCATGAAA 59.881 61.111 6.16 0.00 45.68 2.69
165 166 1.535202 GGTGCCCACCCCATGAAAA 60.535 57.895 6.16 0.00 45.68 2.29
166 167 0.909133 GGTGCCCACCCCATGAAAAT 60.909 55.000 6.16 0.00 45.68 1.82
167 168 0.249955 GTGCCCACCCCATGAAAATG 59.750 55.000 0.00 0.00 0.00 2.32
168 169 0.178909 TGCCCACCCCATGAAAATGT 60.179 50.000 0.00 0.00 0.00 2.71
169 170 0.249955 GCCCACCCCATGAAAATGTG 59.750 55.000 0.00 0.00 0.00 3.21
170 171 0.903942 CCCACCCCATGAAAATGTGG 59.096 55.000 0.00 3.32 44.79 4.17
173 174 2.806434 CACCCCATGAAAATGTGGAGA 58.194 47.619 0.00 0.00 37.72 3.71
174 175 3.368248 CACCCCATGAAAATGTGGAGAT 58.632 45.455 0.00 0.00 37.72 2.75
175 176 3.770933 CACCCCATGAAAATGTGGAGATT 59.229 43.478 0.00 0.00 37.72 2.40
176 177 3.770933 ACCCCATGAAAATGTGGAGATTG 59.229 43.478 0.00 0.00 37.72 2.67
177 178 4.025360 CCCCATGAAAATGTGGAGATTGA 58.975 43.478 0.00 0.00 37.72 2.57
178 179 4.098960 CCCCATGAAAATGTGGAGATTGAG 59.901 45.833 0.00 0.00 37.72 3.02
179 180 4.708421 CCCATGAAAATGTGGAGATTGAGT 59.292 41.667 0.00 0.00 37.72 3.41
180 181 5.887598 CCCATGAAAATGTGGAGATTGAGTA 59.112 40.000 0.00 0.00 37.72 2.59
181 182 6.039047 CCCATGAAAATGTGGAGATTGAGTAG 59.961 42.308 0.00 0.00 37.72 2.57
182 183 6.459298 CCATGAAAATGTGGAGATTGAGTAGC 60.459 42.308 0.00 0.00 37.72 3.58
183 184 4.631377 TGAAAATGTGGAGATTGAGTAGCG 59.369 41.667 0.00 0.00 0.00 4.26
184 185 3.895232 AATGTGGAGATTGAGTAGCGT 57.105 42.857 0.00 0.00 0.00 5.07
185 186 2.941453 TGTGGAGATTGAGTAGCGTC 57.059 50.000 0.00 0.00 0.00 5.19
186 187 1.132453 TGTGGAGATTGAGTAGCGTCG 59.868 52.381 0.00 0.00 0.00 5.12
187 188 1.400846 GTGGAGATTGAGTAGCGTCGA 59.599 52.381 0.00 0.00 0.00 4.20
188 189 2.089201 TGGAGATTGAGTAGCGTCGAA 58.911 47.619 0.00 0.00 0.00 3.71
189 190 2.490509 TGGAGATTGAGTAGCGTCGAAA 59.509 45.455 0.00 0.00 0.00 3.46
190 191 3.130516 TGGAGATTGAGTAGCGTCGAAAT 59.869 43.478 0.00 0.00 0.00 2.17
191 192 4.337274 TGGAGATTGAGTAGCGTCGAAATA 59.663 41.667 0.00 0.00 0.00 1.40
192 193 4.676018 GGAGATTGAGTAGCGTCGAAATAC 59.324 45.833 0.00 0.00 0.00 1.89
193 194 4.608951 AGATTGAGTAGCGTCGAAATACC 58.391 43.478 0.00 0.00 0.00 2.73
194 195 2.857592 TGAGTAGCGTCGAAATACCC 57.142 50.000 0.00 0.00 0.00 3.69
195 196 1.064505 TGAGTAGCGTCGAAATACCCG 59.935 52.381 0.00 0.00 0.00 5.28
196 197 1.064654 GAGTAGCGTCGAAATACCCGT 59.935 52.381 0.00 0.00 0.00 5.28
197 198 1.194495 GTAGCGTCGAAATACCCGTG 58.806 55.000 0.00 0.00 0.00 4.94
198 199 1.093972 TAGCGTCGAAATACCCGTGA 58.906 50.000 0.00 0.00 0.00 4.35
199 200 0.179145 AGCGTCGAAATACCCGTGAG 60.179 55.000 0.00 0.00 0.00 3.51
200 201 0.179156 GCGTCGAAATACCCGTGAGA 60.179 55.000 0.00 0.00 0.00 3.27
201 202 1.535437 GCGTCGAAATACCCGTGAGAT 60.535 52.381 0.00 0.00 0.00 2.75
202 203 2.117137 CGTCGAAATACCCGTGAGATG 58.883 52.381 0.00 0.00 0.00 2.90
203 204 1.859080 GTCGAAATACCCGTGAGATGC 59.141 52.381 0.00 0.00 0.00 3.91
204 205 1.202486 TCGAAATACCCGTGAGATGCC 60.202 52.381 0.00 0.00 0.00 4.40
205 206 1.594331 GAAATACCCGTGAGATGCCC 58.406 55.000 0.00 0.00 0.00 5.36
206 207 0.179056 AAATACCCGTGAGATGCCCG 60.179 55.000 0.00 0.00 0.00 6.13
207 208 1.335132 AATACCCGTGAGATGCCCGT 61.335 55.000 0.00 0.00 0.00 5.28
208 209 0.468585 ATACCCGTGAGATGCCCGTA 60.469 55.000 0.00 0.00 0.00 4.02
209 210 0.683828 TACCCGTGAGATGCCCGTAA 60.684 55.000 0.00 0.00 0.00 3.18
210 211 1.335132 ACCCGTGAGATGCCCGTAAT 61.335 55.000 0.00 0.00 0.00 1.89
211 212 0.880278 CCCGTGAGATGCCCGTAATG 60.880 60.000 0.00 0.00 0.00 1.90
212 213 1.498865 CCGTGAGATGCCCGTAATGC 61.499 60.000 0.00 0.00 0.00 3.56
213 214 0.530650 CGTGAGATGCCCGTAATGCT 60.531 55.000 0.00 0.00 0.00 3.79
214 215 1.221414 GTGAGATGCCCGTAATGCTC 58.779 55.000 0.00 0.00 0.00 4.26
215 216 0.106708 TGAGATGCCCGTAATGCTCC 59.893 55.000 0.00 0.00 0.00 4.70
216 217 0.946221 GAGATGCCCGTAATGCTCCG 60.946 60.000 0.00 0.00 0.00 4.63
217 218 1.227556 GATGCCCGTAATGCTCCGT 60.228 57.895 0.00 0.00 0.00 4.69
218 219 1.498865 GATGCCCGTAATGCTCCGTG 61.499 60.000 0.00 0.00 0.00 4.94
219 220 3.573491 GCCCGTAATGCTCCGTGC 61.573 66.667 0.00 0.00 43.25 5.34
220 221 3.261951 CCCGTAATGCTCCGTGCG 61.262 66.667 0.00 0.00 46.63 5.34
221 222 2.508439 CCGTAATGCTCCGTGCGT 60.508 61.111 0.00 0.00 46.63 5.24
222 223 2.514013 CCGTAATGCTCCGTGCGTC 61.514 63.158 0.00 0.00 46.63 5.19
223 224 1.516386 CGTAATGCTCCGTGCGTCT 60.516 57.895 0.00 0.00 46.63 4.18
224 225 1.076533 CGTAATGCTCCGTGCGTCTT 61.077 55.000 0.00 0.00 46.63 3.01
225 226 0.370273 GTAATGCTCCGTGCGTCTTG 59.630 55.000 0.00 0.00 46.63 3.02
226 227 0.739462 TAATGCTCCGTGCGTCTTGG 60.739 55.000 0.00 0.00 46.63 3.61
227 228 2.449031 AATGCTCCGTGCGTCTTGGA 62.449 55.000 0.00 0.00 46.63 3.53
228 229 2.125512 GCTCCGTGCGTCTTGGAT 60.126 61.111 0.00 0.00 0.00 3.41
229 230 1.741770 GCTCCGTGCGTCTTGGATT 60.742 57.895 0.00 0.00 0.00 3.01
230 231 0.459585 GCTCCGTGCGTCTTGGATTA 60.460 55.000 0.00 0.00 0.00 1.75
231 232 1.806623 GCTCCGTGCGTCTTGGATTAT 60.807 52.381 0.00 0.00 0.00 1.28
232 233 2.550978 CTCCGTGCGTCTTGGATTATT 58.449 47.619 0.00 0.00 0.00 1.40
233 234 2.276201 TCCGTGCGTCTTGGATTATTG 58.724 47.619 0.00 0.00 0.00 1.90
253 255 1.999024 GTTTCGGGTCGCCGTTTATAA 59.001 47.619 1.33 0.00 34.52 0.98
288 291 0.179225 GACAGCAACAACGCGGTATG 60.179 55.000 12.47 8.04 40.53 2.39
374 377 4.975502 CACACAATGTGCAAAACTAATCGT 59.024 37.500 14.01 0.00 41.89 3.73
383 386 7.418408 TGTGCAAAACTAATCGTTGTAATTGA 58.582 30.769 0.00 0.00 35.61 2.57
428 431 7.767250 TTATTCATTTCAATACACCACCACA 57.233 32.000 0.00 0.00 0.00 4.17
433 436 2.705730 TCAATACACCACCACATTCCG 58.294 47.619 0.00 0.00 0.00 4.30
441 444 2.243736 ACCACCACATTCCGGGATAATT 59.756 45.455 0.00 0.00 0.00 1.40
443 446 4.079672 ACCACCACATTCCGGGATAATTTA 60.080 41.667 0.00 0.00 0.00 1.40
609 617 7.033530 TGTGTTAATAAAGATTTATGGCCCG 57.966 36.000 0.00 0.00 33.85 6.13
614 622 3.885724 AAAGATTTATGGCCCGTTTGG 57.114 42.857 0.00 0.00 37.09 3.28
680 688 1.267806 GATGGGCGAGCAATATTGTGG 59.732 52.381 16.61 7.56 0.00 4.17
689 697 5.333645 GCGAGCAATATTGTGGTAATGAGAG 60.334 44.000 16.61 0.00 0.00 3.20
690 698 5.178252 CGAGCAATATTGTGGTAATGAGAGG 59.822 44.000 16.61 0.00 0.00 3.69
691 699 5.380043 AGCAATATTGTGGTAATGAGAGGG 58.620 41.667 16.61 0.00 0.00 4.30
692 700 4.520492 GCAATATTGTGGTAATGAGAGGGG 59.480 45.833 16.61 0.00 0.00 4.79
693 701 5.072741 CAATATTGTGGTAATGAGAGGGGG 58.927 45.833 7.32 0.00 0.00 5.40
697 705 2.307686 TGTGGTAATGAGAGGGGGAAAC 59.692 50.000 0.00 0.00 0.00 2.78
720 731 4.219264 TCTGTGGTGTGATGATGCATTA 57.781 40.909 0.00 0.00 0.00 1.90
814 825 3.198872 GGGTTTGAGATGTGCTAGCTAC 58.801 50.000 17.23 12.72 0.00 3.58
815 826 3.369471 GGGTTTGAGATGTGCTAGCTACA 60.369 47.826 17.23 17.78 0.00 2.74
845 856 3.605056 TCACGTTAACGAGCACTAAATCG 59.395 43.478 33.06 3.35 44.36 3.34
859 870 0.249073 AAATCGTGCGATCTCCTCCG 60.249 55.000 7.57 0.00 33.08 4.63
915 926 8.168725 ACCATATCATGAAATTAAGAGCATCCT 58.831 33.333 0.00 0.00 33.66 3.24
942 954 2.969950 TCCACTATAAATCCACCCCTCG 59.030 50.000 0.00 0.00 0.00 4.63
1124 1137 1.226802 CCATCCTCTGCGACGTCAG 60.227 63.158 17.16 7.17 35.46 3.51
1188 1201 3.179339 TTCCCCTCCCACGCCAAA 61.179 61.111 0.00 0.00 0.00 3.28
1215 1228 3.782443 ATCCTCACCCGGTTCCGC 61.782 66.667 0.00 0.00 0.00 5.54
1245 1258 2.202395 GCTGGGGCAGTGCAAGAAA 61.202 57.895 18.61 0.00 38.54 2.52
1428 1441 1.519455 CAGCGTCGGATGGAAGGTC 60.519 63.158 0.00 0.00 32.44 3.85
1548 1561 1.202782 AGCAGCATGGAGGATCACATC 60.203 52.381 0.00 0.00 36.25 3.06
1583 1599 2.689573 TACCAGGTCCAGGCACCACT 62.690 60.000 0.00 0.00 39.16 4.00
1590 1606 3.362797 CAGGCACCACTGCAGCAG 61.363 66.667 21.54 21.54 46.28 4.24
1648 1664 4.821589 CCGCAGAAGACCTCGGCC 62.822 72.222 0.00 0.00 41.75 6.13
1650 1666 3.394836 GCAGAAGACCTCGGCCCT 61.395 66.667 0.00 0.00 39.14 5.19
1711 1727 2.440430 TCGGCTTCTCCTCCTCCG 60.440 66.667 0.00 0.00 41.30 4.63
1716 1732 4.377760 TTCTCCTCCTCCGGCGGT 62.378 66.667 27.32 0.00 0.00 5.68
1782 1798 0.552848 TGAGCCATTTCCCTCCCATC 59.447 55.000 0.00 0.00 0.00 3.51
1794 1811 3.076182 TCCCTCCCATCTAAGCTACCTAG 59.924 52.174 0.00 0.00 0.00 3.02
1815 1832 2.955461 GCTACCTAGGATGGTGGTGAGT 60.955 54.545 17.98 0.00 40.20 3.41
1819 1836 3.052109 ACCTAGGATGGTGGTGAGTATCA 60.052 47.826 17.98 0.00 40.47 2.15
1821 1838 5.877784 ACCTAGGATGGTGGTGAGTATCATT 60.878 44.000 17.98 0.00 43.24 2.57
1916 1933 2.335316 TGGTATTGCCGTATTGGTCC 57.665 50.000 0.00 0.00 41.21 4.46
1927 1944 2.677902 CGTATTGGTCCAGATGCACAGT 60.678 50.000 0.00 0.00 0.00 3.55
1983 2000 6.884832 TCCTGAAATTGTTATATGAGGTCGT 58.115 36.000 0.00 0.00 0.00 4.34
1984 2001 8.014070 TCCTGAAATTGTTATATGAGGTCGTA 57.986 34.615 0.00 0.00 0.00 3.43
1985 2002 8.647796 TCCTGAAATTGTTATATGAGGTCGTAT 58.352 33.333 0.00 0.00 33.10 3.06
1986 2003 9.923143 CCTGAAATTGTTATATGAGGTCGTATA 57.077 33.333 0.00 0.00 31.14 1.47
2037 2054 8.142994 TCTTCGAGCCAAGTCATTTATAATTC 57.857 34.615 0.00 0.00 0.00 2.17
2089 2356 5.028549 TGATCTCTTCCATAGGCTTGTTC 57.971 43.478 0.00 0.00 0.00 3.18
2121 2388 2.029244 CGTAAATCGTAAGCTGCACCTG 59.971 50.000 1.02 0.00 34.52 4.00
2148 2416 7.522901 TTTTGATGTCACAATGTTTTGTCAG 57.477 32.000 0.00 0.00 44.24 3.51
2150 2418 5.820131 TGATGTCACAATGTTTTGTCAGAC 58.180 37.500 0.00 0.00 44.24 3.51
2277 2547 0.968405 GGTGCCTTGAATTTCCTGCA 59.032 50.000 0.00 0.00 0.00 4.41
2344 2614 4.899352 AACTAGTTGAAGATGTGCTCCT 57.101 40.909 7.48 0.00 0.00 3.69
2345 2615 4.199432 ACTAGTTGAAGATGTGCTCCTG 57.801 45.455 0.00 0.00 0.00 3.86
2347 2617 1.980765 AGTTGAAGATGTGCTCCTGGA 59.019 47.619 0.00 0.00 0.00 3.86
2348 2618 2.027377 AGTTGAAGATGTGCTCCTGGAG 60.027 50.000 19.55 19.55 0.00 3.86
2361 2631 3.690460 CTCCTGGAGCAAAGGTAAATGT 58.310 45.455 11.42 0.00 36.14 2.71
2362 2632 3.420893 TCCTGGAGCAAAGGTAAATGTG 58.579 45.455 0.00 0.00 36.14 3.21
2363 2633 2.094545 CCTGGAGCAAAGGTAAATGTGC 60.095 50.000 0.00 0.00 37.26 4.57
2365 2635 2.557924 TGGAGCAAAGGTAAATGTGCTG 59.442 45.455 1.06 0.00 46.99 4.41
2366 2636 2.094545 GGAGCAAAGGTAAATGTGCTGG 60.095 50.000 1.06 0.00 46.99 4.85
2367 2637 2.819608 GAGCAAAGGTAAATGTGCTGGA 59.180 45.455 1.06 0.00 46.99 3.86
2368 2638 3.434309 AGCAAAGGTAAATGTGCTGGAT 58.566 40.909 0.00 0.00 45.35 3.41
2369 2639 3.194116 AGCAAAGGTAAATGTGCTGGATG 59.806 43.478 0.00 0.00 45.35 3.51
2370 2640 3.676873 GCAAAGGTAAATGTGCTGGATGG 60.677 47.826 0.00 0.00 34.13 3.51
2371 2641 3.456380 AAGGTAAATGTGCTGGATGGT 57.544 42.857 0.00 0.00 0.00 3.55
2372 2642 3.456380 AGGTAAATGTGCTGGATGGTT 57.544 42.857 0.00 0.00 0.00 3.67
2373 2643 3.356290 AGGTAAATGTGCTGGATGGTTC 58.644 45.455 0.00 0.00 0.00 3.62
2378 2648 2.118313 TGTGCTGGATGGTTCATCTG 57.882 50.000 7.68 3.46 40.39 2.90
2401 2671 6.514947 TGTGCCTGGATAATTAATGATTTGC 58.485 36.000 0.00 0.00 0.00 3.68
2417 2687 6.751514 TGATTTGCGACTTAATTACATGGT 57.248 33.333 0.00 0.00 0.00 3.55
2446 2716 6.960468 GCTGTTCTAGTTAACTGCTTCTTTT 58.040 36.000 18.56 0.00 45.51 2.27
2489 2759 3.963383 ACTCAAAGTTTACCACAAGCG 57.037 42.857 0.00 0.00 0.00 4.68
2515 2785 3.914771 ACAAATAGGATCATGGGGTTGG 58.085 45.455 0.00 0.00 0.00 3.77
2534 2804 1.342819 GGCTTAACCAAACATGGCACA 59.657 47.619 0.00 0.00 40.77 4.57
2535 2805 2.028203 GGCTTAACCAAACATGGCACAT 60.028 45.455 0.00 0.00 40.84 3.21
2555 2825 6.128282 GCACATCTGATTTAAAGACCGAGAAA 60.128 38.462 0.00 0.00 0.00 2.52
2568 2839 5.866207 AGACCGAGAAAACTTGGAAGTAAT 58.134 37.500 10.09 0.00 38.57 1.89
2581 2853 4.941713 TGGAAGTAATTGGGCTTGGTATT 58.058 39.130 0.00 0.00 0.00 1.89
2588 2860 9.930158 AAGTAATTGGGCTTGGTATTCTAATTA 57.070 29.630 0.00 0.00 0.00 1.40
2626 2898 9.947669 ACAAATTATACTACTATGTCGTCTGAC 57.052 33.333 0.00 0.00 45.71 3.51
2632 2904 6.847956 ACTACTATGTCGTCTGACTATCAC 57.152 41.667 6.21 0.00 45.70 3.06
2633 2905 5.759273 ACTACTATGTCGTCTGACTATCACC 59.241 44.000 6.21 0.00 45.70 4.02
2634 2906 4.524053 ACTATGTCGTCTGACTATCACCA 58.476 43.478 6.21 0.00 45.70 4.17
2635 2907 4.948004 ACTATGTCGTCTGACTATCACCAA 59.052 41.667 6.21 0.00 45.70 3.67
2636 2908 5.594725 ACTATGTCGTCTGACTATCACCAAT 59.405 40.000 6.21 0.00 45.70 3.16
2637 2909 4.110036 TGTCGTCTGACTATCACCAATG 57.890 45.455 6.21 0.00 45.70 2.82
2638 2910 2.860735 GTCGTCTGACTATCACCAATGC 59.139 50.000 6.21 0.00 42.08 3.56
2639 2911 1.854743 CGTCTGACTATCACCAATGCG 59.145 52.381 6.21 0.00 0.00 4.73
2640 2912 2.205074 GTCTGACTATCACCAATGCGG 58.795 52.381 0.00 0.00 42.50 5.69
2641 2913 0.940126 CTGACTATCACCAATGCGGC 59.060 55.000 0.00 0.00 39.03 6.53
2642 2914 0.251634 TGACTATCACCAATGCGGCA 59.748 50.000 4.58 4.58 39.03 5.69
2643 2915 1.339535 TGACTATCACCAATGCGGCAA 60.340 47.619 6.82 0.00 39.03 4.52
2644 2916 1.742831 GACTATCACCAATGCGGCAAA 59.257 47.619 6.82 0.00 39.03 3.68
2645 2917 1.472480 ACTATCACCAATGCGGCAAAC 59.528 47.619 6.82 0.00 39.03 2.93
2646 2918 0.814457 TATCACCAATGCGGCAAACC 59.186 50.000 6.82 0.00 39.03 3.27
2647 2919 1.184322 ATCACCAATGCGGCAAACCA 61.184 50.000 6.82 0.00 39.03 3.67
2648 2920 1.373246 CACCAATGCGGCAAACCAG 60.373 57.895 6.82 0.00 39.03 4.00
2649 2921 1.530419 ACCAATGCGGCAAACCAGA 60.530 52.632 6.82 0.00 39.03 3.86
2650 2922 1.080569 CCAATGCGGCAAACCAGAC 60.081 57.895 6.82 0.00 34.57 3.51
2651 2923 1.080569 CAATGCGGCAAACCAGACC 60.081 57.895 6.82 0.00 34.57 3.85
2652 2924 2.275380 AATGCGGCAAACCAGACCC 61.275 57.895 6.82 0.00 34.57 4.46
2653 2925 2.713531 AATGCGGCAAACCAGACCCT 62.714 55.000 6.82 0.00 34.57 4.34
2654 2926 3.365265 GCGGCAAACCAGACCCTG 61.365 66.667 0.00 0.00 34.57 4.45
2655 2927 2.113139 CGGCAAACCAGACCCTGT 59.887 61.111 0.00 0.00 34.57 4.00
2656 2928 2.260869 CGGCAAACCAGACCCTGTG 61.261 63.158 0.00 0.00 34.57 3.66
2657 2929 1.152756 GGCAAACCAGACCCTGTGT 60.153 57.895 0.00 0.00 35.26 3.72
2658 2930 1.172812 GGCAAACCAGACCCTGTGTC 61.173 60.000 0.00 0.00 44.82 3.67
2666 2938 3.896317 GACCCTGTGTCAGAGTGTC 57.104 57.895 0.00 0.00 43.85 3.67
2667 2939 1.333177 GACCCTGTGTCAGAGTGTCT 58.667 55.000 5.50 0.00 43.85 3.41
2668 2940 1.271102 GACCCTGTGTCAGAGTGTCTC 59.729 57.143 5.50 0.00 43.85 3.36
2669 2941 0.242286 CCCTGTGTCAGAGTGTCTCG 59.758 60.000 0.00 0.00 35.36 4.04
2670 2942 0.387878 CCTGTGTCAGAGTGTCTCGC 60.388 60.000 0.00 0.00 35.36 5.03
2671 2943 0.387878 CTGTGTCAGAGTGTCTCGCC 60.388 60.000 0.00 0.00 35.36 5.54
2672 2944 1.080434 GTGTCAGAGTGTCTCGCCC 60.080 63.158 0.00 0.00 35.36 6.13
2673 2945 1.228583 TGTCAGAGTGTCTCGCCCT 60.229 57.895 0.00 0.00 35.36 5.19
2674 2946 0.827925 TGTCAGAGTGTCTCGCCCTT 60.828 55.000 0.00 0.00 35.36 3.95
2675 2947 0.109039 GTCAGAGTGTCTCGCCCTTC 60.109 60.000 0.00 0.00 35.36 3.46
2676 2948 0.251386 TCAGAGTGTCTCGCCCTTCT 60.251 55.000 0.00 0.00 35.36 2.85
2677 2949 1.004394 TCAGAGTGTCTCGCCCTTCTA 59.996 52.381 0.00 0.00 35.36 2.10
2678 2950 1.403679 CAGAGTGTCTCGCCCTTCTAG 59.596 57.143 0.00 0.00 35.36 2.43
2679 2951 0.741915 GAGTGTCTCGCCCTTCTAGG 59.258 60.000 0.00 0.00 34.30 3.02
2680 2952 0.331954 AGTGTCTCGCCCTTCTAGGA 59.668 55.000 0.00 0.00 37.67 2.94
2681 2953 1.063567 AGTGTCTCGCCCTTCTAGGAT 60.064 52.381 0.00 0.00 37.67 3.24
2682 2954 2.175069 AGTGTCTCGCCCTTCTAGGATA 59.825 50.000 0.00 0.00 37.67 2.59
2683 2955 2.554893 GTGTCTCGCCCTTCTAGGATAG 59.445 54.545 0.00 0.00 37.67 2.08
2684 2956 1.542472 GTCTCGCCCTTCTAGGATAGC 59.458 57.143 0.00 0.00 37.67 2.97
2685 2957 1.425831 TCTCGCCCTTCTAGGATAGCT 59.574 52.381 0.00 0.00 37.67 3.32
2686 2958 1.816224 CTCGCCCTTCTAGGATAGCTC 59.184 57.143 0.00 0.00 37.67 4.09
2687 2959 1.425831 TCGCCCTTCTAGGATAGCTCT 59.574 52.381 0.00 0.00 37.67 4.09
2688 2960 1.816224 CGCCCTTCTAGGATAGCTCTC 59.184 57.143 0.00 0.00 37.67 3.20
2689 2961 2.176045 GCCCTTCTAGGATAGCTCTCC 58.824 57.143 10.13 10.13 37.67 3.71
2690 2962 2.491825 GCCCTTCTAGGATAGCTCTCCA 60.492 54.545 19.47 5.68 37.67 3.86
2691 2963 3.161866 CCCTTCTAGGATAGCTCTCCAC 58.838 54.545 19.47 0.00 37.67 4.02
2692 2964 3.437198 CCCTTCTAGGATAGCTCTCCACA 60.437 52.174 19.47 6.60 37.67 4.17
2693 2965 3.572255 CCTTCTAGGATAGCTCTCCACAC 59.428 52.174 19.47 0.00 37.67 3.82
2694 2966 3.231207 TCTAGGATAGCTCTCCACACC 57.769 52.381 19.47 0.99 38.99 4.16
2695 2967 2.786445 TCTAGGATAGCTCTCCACACCT 59.214 50.000 19.47 7.88 38.99 4.00
2696 2968 1.786937 AGGATAGCTCTCCACACCTG 58.213 55.000 19.47 0.00 37.81 4.00
2697 2969 0.105778 GGATAGCTCTCCACACCTGC 59.894 60.000 13.09 0.00 35.24 4.85
2698 2970 0.249238 GATAGCTCTCCACACCTGCG 60.249 60.000 0.00 0.00 0.00 5.18
2699 2971 0.684479 ATAGCTCTCCACACCTGCGA 60.684 55.000 0.00 0.00 0.00 5.10
2700 2972 0.684479 TAGCTCTCCACACCTGCGAT 60.684 55.000 0.00 0.00 0.00 4.58
2701 2973 1.812922 GCTCTCCACACCTGCGATG 60.813 63.158 0.00 0.00 0.00 3.84
2702 2974 1.153489 CTCTCCACACCTGCGATGG 60.153 63.158 0.00 0.00 34.58 3.51
2703 2975 2.821366 CTCCACACCTGCGATGGC 60.821 66.667 0.00 0.00 40.52 4.40
2704 2976 4.758251 TCCACACCTGCGATGGCG 62.758 66.667 0.00 0.00 44.10 5.69
2726 2998 3.515286 CCCAAGCTCGGCATGCAG 61.515 66.667 21.36 16.69 0.00 4.41
2727 2999 2.437180 CCAAGCTCGGCATGCAGA 60.437 61.111 21.36 20.41 0.00 4.26
2728 3000 2.042259 CCAAGCTCGGCATGCAGAA 61.042 57.895 21.00 5.97 0.00 3.02
2729 3001 1.588824 CCAAGCTCGGCATGCAGAAA 61.589 55.000 21.00 0.40 0.00 2.52
2730 3002 0.241749 CAAGCTCGGCATGCAGAAAA 59.758 50.000 21.00 0.00 0.00 2.29
2731 3003 1.135199 CAAGCTCGGCATGCAGAAAAT 60.135 47.619 21.00 7.53 0.00 1.82
2732 3004 0.737219 AGCTCGGCATGCAGAAAATC 59.263 50.000 21.00 10.58 0.00 2.17
2733 3005 0.452987 GCTCGGCATGCAGAAAATCA 59.547 50.000 21.00 0.00 0.00 2.57
2734 3006 1.796617 GCTCGGCATGCAGAAAATCAC 60.797 52.381 21.00 3.90 0.00 3.06
2735 3007 1.741706 CTCGGCATGCAGAAAATCACT 59.258 47.619 21.00 0.00 0.00 3.41
2736 3008 1.739466 TCGGCATGCAGAAAATCACTC 59.261 47.619 18.56 0.00 0.00 3.51
2737 3009 1.530441 CGGCATGCAGAAAATCACTCG 60.530 52.381 21.36 5.06 0.00 4.18
2738 3010 1.739466 GGCATGCAGAAAATCACTCGA 59.261 47.619 21.36 0.00 0.00 4.04
2739 3011 2.162208 GGCATGCAGAAAATCACTCGAA 59.838 45.455 21.36 0.00 0.00 3.71
2740 3012 3.423571 GCATGCAGAAAATCACTCGAAG 58.576 45.455 14.21 0.00 0.00 3.79
2741 3013 3.730061 GCATGCAGAAAATCACTCGAAGG 60.730 47.826 14.21 0.00 0.00 3.46
2742 3014 3.401033 TGCAGAAAATCACTCGAAGGA 57.599 42.857 0.00 0.00 0.00 3.36
2743 3015 3.738982 TGCAGAAAATCACTCGAAGGAA 58.261 40.909 0.00 0.00 0.00 3.36
2744 3016 4.133820 TGCAGAAAATCACTCGAAGGAAA 58.866 39.130 0.00 0.00 0.00 3.13
2745 3017 4.761739 TGCAGAAAATCACTCGAAGGAAAT 59.238 37.500 0.00 0.00 0.00 2.17
2746 3018 5.937540 TGCAGAAAATCACTCGAAGGAAATA 59.062 36.000 0.00 0.00 0.00 1.40
2747 3019 6.128282 TGCAGAAAATCACTCGAAGGAAATAC 60.128 38.462 0.00 0.00 0.00 1.89
2748 3020 6.092807 GCAGAAAATCACTCGAAGGAAATACT 59.907 38.462 0.00 0.00 0.00 2.12
2749 3021 7.361286 GCAGAAAATCACTCGAAGGAAATACTT 60.361 37.037 0.00 0.00 0.00 2.24
2750 3022 9.151471 CAGAAAATCACTCGAAGGAAATACTTA 57.849 33.333 0.00 0.00 0.00 2.24
2751 3023 9.372369 AGAAAATCACTCGAAGGAAATACTTAG 57.628 33.333 0.00 0.00 0.00 2.18
2752 3024 7.541122 AAATCACTCGAAGGAAATACTTAGC 57.459 36.000 0.00 0.00 0.00 3.09
2753 3025 5.916661 TCACTCGAAGGAAATACTTAGCT 57.083 39.130 0.00 0.00 0.00 3.32
2754 3026 5.892568 TCACTCGAAGGAAATACTTAGCTC 58.107 41.667 0.00 0.00 0.00 4.09
2755 3027 4.735822 CACTCGAAGGAAATACTTAGCTCG 59.264 45.833 0.00 0.00 0.00 5.03
2756 3028 4.398673 ACTCGAAGGAAATACTTAGCTCGT 59.601 41.667 0.00 0.00 0.00 4.18
2757 3029 5.587844 ACTCGAAGGAAATACTTAGCTCGTA 59.412 40.000 0.00 0.00 0.00 3.43
2758 3030 6.057627 TCGAAGGAAATACTTAGCTCGTAG 57.942 41.667 0.00 0.00 0.00 3.51
2759 3031 5.819379 TCGAAGGAAATACTTAGCTCGTAGA 59.181 40.000 0.00 0.00 0.00 2.59
2760 3032 6.317140 TCGAAGGAAATACTTAGCTCGTAGAA 59.683 38.462 0.00 0.00 34.09 2.10
2761 3033 7.013083 TCGAAGGAAATACTTAGCTCGTAGAAT 59.987 37.037 0.00 0.00 34.09 2.40
2762 3034 7.648510 CGAAGGAAATACTTAGCTCGTAGAATT 59.351 37.037 0.00 0.00 34.09 2.17
2763 3035 8.874744 AAGGAAATACTTAGCTCGTAGAATTC 57.125 34.615 0.00 0.00 34.09 2.17
2764 3036 7.140048 AGGAAATACTTAGCTCGTAGAATTCG 58.860 38.462 0.00 0.00 34.09 3.34
2765 3037 6.916932 GGAAATACTTAGCTCGTAGAATTCGT 59.083 38.462 0.00 0.00 34.09 3.85
2766 3038 7.096558 GGAAATACTTAGCTCGTAGAATTCGTG 60.097 40.741 0.00 0.00 34.09 4.35
2767 3039 3.436496 ACTTAGCTCGTAGAATTCGTGC 58.564 45.455 0.00 2.03 44.40 5.34
2768 3040 3.119602 ACTTAGCTCGTAGAATTCGTGCA 60.120 43.478 12.60 0.00 45.75 4.57
2769 3041 1.630148 AGCTCGTAGAATTCGTGCAC 58.370 50.000 6.82 6.82 45.75 4.57
2770 3042 0.645868 GCTCGTAGAATTCGTGCACC 59.354 55.000 12.15 0.00 43.81 5.01
2771 3043 0.914551 CTCGTAGAATTCGTGCACCG 59.085 55.000 12.15 6.39 34.09 4.94
2772 3044 0.522626 TCGTAGAATTCGTGCACCGA 59.477 50.000 12.15 8.87 45.66 4.69
2773 3045 3.350125 CTCGTAGAATTCGTGCACCGAG 61.350 54.545 18.64 18.64 41.77 4.63
2785 3057 2.037527 ACCGAGGGAGGTGGAGTC 59.962 66.667 0.00 0.00 44.07 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.967066 TCACCATCAACGGCCAAAAAT 59.033 42.857 2.24 0.00 0.00 1.82
1 2 1.403814 TCACCATCAACGGCCAAAAA 58.596 45.000 2.24 0.00 0.00 1.94
2 3 1.403814 TTCACCATCAACGGCCAAAA 58.596 45.000 2.24 0.00 0.00 2.44
3 4 1.403814 TTTCACCATCAACGGCCAAA 58.596 45.000 2.24 0.00 0.00 3.28
4 5 1.403814 TTTTCACCATCAACGGCCAA 58.596 45.000 2.24 0.00 0.00 4.52
5 6 1.403814 TTTTTCACCATCAACGGCCA 58.596 45.000 2.24 0.00 0.00 5.36
28 29 9.968870 GTTTGTAATAGACACCCAATTAAACAA 57.031 29.630 0.00 0.00 37.96 2.83
29 30 9.132923 TGTTTGTAATAGACACCCAATTAAACA 57.867 29.630 0.00 0.00 37.96 2.83
30 31 9.968870 TTGTTTGTAATAGACACCCAATTAAAC 57.031 29.630 0.00 0.00 37.96 2.01
31 32 9.968870 GTTGTTTGTAATAGACACCCAATTAAA 57.031 29.630 0.00 0.00 37.96 1.52
32 33 8.291032 CGTTGTTTGTAATAGACACCCAATTAA 58.709 33.333 0.00 0.00 37.96 1.40
33 34 7.444792 ACGTTGTTTGTAATAGACACCCAATTA 59.555 33.333 0.00 0.00 37.96 1.40
34 35 6.263617 ACGTTGTTTGTAATAGACACCCAATT 59.736 34.615 0.00 0.00 37.96 2.32
35 36 5.766174 ACGTTGTTTGTAATAGACACCCAAT 59.234 36.000 0.00 0.00 37.96 3.16
36 37 5.124645 ACGTTGTTTGTAATAGACACCCAA 58.875 37.500 0.00 0.00 37.96 4.12
37 38 4.706035 ACGTTGTTTGTAATAGACACCCA 58.294 39.130 0.00 0.00 37.96 4.51
38 39 5.236911 TGAACGTTGTTTGTAATAGACACCC 59.763 40.000 5.00 0.00 37.96 4.61
39 40 6.289745 TGAACGTTGTTTGTAATAGACACC 57.710 37.500 5.00 0.00 37.96 4.16
40 41 6.795114 CCATGAACGTTGTTTGTAATAGACAC 59.205 38.462 5.00 0.00 37.96 3.67
41 42 6.566942 GCCATGAACGTTGTTTGTAATAGACA 60.567 38.462 5.00 0.00 35.78 3.41
42 43 5.793457 GCCATGAACGTTGTTTGTAATAGAC 59.207 40.000 5.00 0.00 0.00 2.59
43 44 5.703592 AGCCATGAACGTTGTTTGTAATAGA 59.296 36.000 5.00 0.00 0.00 1.98
44 45 5.938322 AGCCATGAACGTTGTTTGTAATAG 58.062 37.500 5.00 0.00 0.00 1.73
45 46 5.950758 AGCCATGAACGTTGTTTGTAATA 57.049 34.783 5.00 0.00 0.00 0.98
46 47 4.846779 AGCCATGAACGTTGTTTGTAAT 57.153 36.364 5.00 0.00 0.00 1.89
47 48 4.817464 AGTAGCCATGAACGTTGTTTGTAA 59.183 37.500 5.00 0.00 0.00 2.41
48 49 4.382291 AGTAGCCATGAACGTTGTTTGTA 58.618 39.130 5.00 0.00 0.00 2.41
49 50 3.211045 AGTAGCCATGAACGTTGTTTGT 58.789 40.909 5.00 0.00 0.00 2.83
50 51 3.664276 CGAGTAGCCATGAACGTTGTTTG 60.664 47.826 5.00 0.00 0.00 2.93
51 52 2.478894 CGAGTAGCCATGAACGTTGTTT 59.521 45.455 5.00 0.00 0.00 2.83
52 53 2.066262 CGAGTAGCCATGAACGTTGTT 58.934 47.619 5.00 0.00 0.00 2.83
53 54 1.710013 CGAGTAGCCATGAACGTTGT 58.290 50.000 5.00 0.00 0.00 3.32
54 55 0.370273 GCGAGTAGCCATGAACGTTG 59.630 55.000 5.00 0.00 40.81 4.10
55 56 1.076533 CGCGAGTAGCCATGAACGTT 61.077 55.000 0.00 0.00 44.76 3.99
56 57 1.516386 CGCGAGTAGCCATGAACGT 60.516 57.895 0.00 0.00 44.76 3.99
57 58 2.860628 GCGCGAGTAGCCATGAACG 61.861 63.158 12.10 0.00 44.76 3.95
58 59 1.756375 CTGCGCGAGTAGCCATGAAC 61.756 60.000 12.10 0.00 44.76 3.18
59 60 1.519234 CTGCGCGAGTAGCCATGAA 60.519 57.895 12.10 0.00 44.76 2.57
60 61 2.104928 CTGCGCGAGTAGCCATGA 59.895 61.111 12.10 0.00 44.76 3.07
61 62 2.104928 TCTGCGCGAGTAGCCATG 59.895 61.111 12.10 0.00 44.04 3.66
62 63 1.949847 AAGTCTGCGCGAGTAGCCAT 61.950 55.000 12.10 0.00 44.04 4.40
63 64 1.310216 TAAGTCTGCGCGAGTAGCCA 61.310 55.000 12.10 0.00 44.04 4.75
64 65 0.030908 ATAAGTCTGCGCGAGTAGCC 59.969 55.000 12.10 0.00 44.04 3.93
65 66 1.518929 CAATAAGTCTGCGCGAGTAGC 59.481 52.381 12.10 1.26 44.04 3.58
66 67 2.798680 ACAATAAGTCTGCGCGAGTAG 58.201 47.619 12.10 4.46 45.89 2.57
67 68 2.933495 ACAATAAGTCTGCGCGAGTA 57.067 45.000 12.10 0.00 0.00 2.59
68 69 2.080286 AACAATAAGTCTGCGCGAGT 57.920 45.000 12.10 3.11 0.00 4.18
69 70 2.035674 CGTAACAATAAGTCTGCGCGAG 60.036 50.000 12.10 4.52 0.00 5.03
70 71 1.915350 CGTAACAATAAGTCTGCGCGA 59.085 47.619 12.10 0.00 0.00 5.87
71 72 1.006391 CCGTAACAATAAGTCTGCGCG 60.006 52.381 0.00 0.00 0.00 6.86
72 73 2.264813 TCCGTAACAATAAGTCTGCGC 58.735 47.619 0.00 0.00 0.00 6.09
73 74 4.565166 TGATTCCGTAACAATAAGTCTGCG 59.435 41.667 0.00 0.00 0.00 5.18
74 75 6.128391 TGTTGATTCCGTAACAATAAGTCTGC 60.128 38.462 0.00 0.00 34.17 4.26
75 76 7.330946 TCTGTTGATTCCGTAACAATAAGTCTG 59.669 37.037 0.00 0.00 36.47 3.51
76 77 7.331193 GTCTGTTGATTCCGTAACAATAAGTCT 59.669 37.037 0.00 0.00 36.47 3.24
77 78 7.331193 AGTCTGTTGATTCCGTAACAATAAGTC 59.669 37.037 0.00 0.00 36.47 3.01
78 79 7.117812 CAGTCTGTTGATTCCGTAACAATAAGT 59.882 37.037 0.00 0.00 36.47 2.24
79 80 7.117812 ACAGTCTGTTGATTCCGTAACAATAAG 59.882 37.037 0.00 0.00 36.47 1.73
80 81 6.932400 ACAGTCTGTTGATTCCGTAACAATAA 59.068 34.615 0.00 0.00 36.47 1.40
81 82 6.460781 ACAGTCTGTTGATTCCGTAACAATA 58.539 36.000 0.00 0.00 36.47 1.90
82 83 5.305585 ACAGTCTGTTGATTCCGTAACAAT 58.694 37.500 0.00 0.00 36.47 2.71
83 84 4.699637 ACAGTCTGTTGATTCCGTAACAA 58.300 39.130 0.00 0.00 36.47 2.83
84 85 4.330944 ACAGTCTGTTGATTCCGTAACA 57.669 40.909 0.00 0.00 35.66 2.41
85 86 6.963049 ATTACAGTCTGTTGATTCCGTAAC 57.037 37.500 11.54 0.00 0.00 2.50
86 87 7.762615 CCTAATTACAGTCTGTTGATTCCGTAA 59.237 37.037 11.54 0.00 0.00 3.18
87 88 7.093640 ACCTAATTACAGTCTGTTGATTCCGTA 60.094 37.037 11.54 0.00 0.00 4.02
88 89 6.106673 CCTAATTACAGTCTGTTGATTCCGT 58.893 40.000 11.54 0.00 0.00 4.69
89 90 6.036083 CACCTAATTACAGTCTGTTGATTCCG 59.964 42.308 11.54 8.13 0.00 4.30
90 91 6.316390 CCACCTAATTACAGTCTGTTGATTCC 59.684 42.308 11.54 0.00 0.00 3.01
91 92 6.879458 ACCACCTAATTACAGTCTGTTGATTC 59.121 38.462 11.54 0.00 0.00 2.52
92 93 6.779860 ACCACCTAATTACAGTCTGTTGATT 58.220 36.000 11.54 13.67 0.00 2.57
93 94 6.374417 ACCACCTAATTACAGTCTGTTGAT 57.626 37.500 11.54 3.36 0.00 2.57
94 95 5.818678 ACCACCTAATTACAGTCTGTTGA 57.181 39.130 11.54 0.85 0.00 3.18
95 96 6.698380 ACTACCACCTAATTACAGTCTGTTG 58.302 40.000 11.54 1.13 0.00 3.33
96 97 6.930068 ACTACCACCTAATTACAGTCTGTT 57.070 37.500 11.54 0.00 0.00 3.16
97 98 6.930068 AACTACCACCTAATTACAGTCTGT 57.070 37.500 10.99 10.99 0.00 3.41
98 99 8.617290 AAAAACTACCACCTAATTACAGTCTG 57.383 34.615 0.00 0.00 0.00 3.51
121 122 6.043938 ACCTCACTCCTAATCACCAGTAAAAA 59.956 38.462 0.00 0.00 0.00 1.94
122 123 5.546499 ACCTCACTCCTAATCACCAGTAAAA 59.454 40.000 0.00 0.00 0.00 1.52
123 124 5.046591 CACCTCACTCCTAATCACCAGTAAA 60.047 44.000 0.00 0.00 0.00 2.01
124 125 4.466370 CACCTCACTCCTAATCACCAGTAA 59.534 45.833 0.00 0.00 0.00 2.24
125 126 4.023980 CACCTCACTCCTAATCACCAGTA 58.976 47.826 0.00 0.00 0.00 2.74
126 127 2.834549 CACCTCACTCCTAATCACCAGT 59.165 50.000 0.00 0.00 0.00 4.00
127 128 2.169352 CCACCTCACTCCTAATCACCAG 59.831 54.545 0.00 0.00 0.00 4.00
128 129 2.187958 CCACCTCACTCCTAATCACCA 58.812 52.381 0.00 0.00 0.00 4.17
129 130 2.093447 CACCACCTCACTCCTAATCACC 60.093 54.545 0.00 0.00 0.00 4.02
130 131 2.678190 GCACCACCTCACTCCTAATCAC 60.678 54.545 0.00 0.00 0.00 3.06
131 132 1.555075 GCACCACCTCACTCCTAATCA 59.445 52.381 0.00 0.00 0.00 2.57
132 133 1.134371 GGCACCACCTCACTCCTAATC 60.134 57.143 0.00 0.00 34.51 1.75
133 134 0.912486 GGCACCACCTCACTCCTAAT 59.088 55.000 0.00 0.00 34.51 1.73
134 135 2.372852 GGCACCACCTCACTCCTAA 58.627 57.895 0.00 0.00 34.51 2.69
135 136 4.130255 GGCACCACCTCACTCCTA 57.870 61.111 0.00 0.00 34.51 2.94
148 149 0.249955 CATTTTCATGGGGTGGGCAC 59.750 55.000 0.00 0.00 0.00 5.01
149 150 0.178909 ACATTTTCATGGGGTGGGCA 60.179 50.000 0.00 0.00 34.27 5.36
150 151 0.249955 CACATTTTCATGGGGTGGGC 59.750 55.000 0.00 0.00 34.27 5.36
156 157 4.708421 ACTCAATCTCCACATTTTCATGGG 59.292 41.667 0.00 0.00 36.56 4.00
157 158 5.909621 ACTCAATCTCCACATTTTCATGG 57.090 39.130 0.00 0.00 34.27 3.66
158 159 6.493116 GCTACTCAATCTCCACATTTTCATG 58.507 40.000 0.00 0.00 36.34 3.07
159 160 5.295292 CGCTACTCAATCTCCACATTTTCAT 59.705 40.000 0.00 0.00 0.00 2.57
160 161 4.631377 CGCTACTCAATCTCCACATTTTCA 59.369 41.667 0.00 0.00 0.00 2.69
161 162 4.631813 ACGCTACTCAATCTCCACATTTTC 59.368 41.667 0.00 0.00 0.00 2.29
162 163 4.579869 ACGCTACTCAATCTCCACATTTT 58.420 39.130 0.00 0.00 0.00 1.82
163 164 4.184629 GACGCTACTCAATCTCCACATTT 58.815 43.478 0.00 0.00 0.00 2.32
164 165 3.735208 CGACGCTACTCAATCTCCACATT 60.735 47.826 0.00 0.00 0.00 2.71
165 166 2.223595 CGACGCTACTCAATCTCCACAT 60.224 50.000 0.00 0.00 0.00 3.21
166 167 1.132453 CGACGCTACTCAATCTCCACA 59.868 52.381 0.00 0.00 0.00 4.17
167 168 1.400846 TCGACGCTACTCAATCTCCAC 59.599 52.381 0.00 0.00 0.00 4.02
168 169 1.746470 TCGACGCTACTCAATCTCCA 58.254 50.000 0.00 0.00 0.00 3.86
169 170 2.846039 TTCGACGCTACTCAATCTCC 57.154 50.000 0.00 0.00 0.00 3.71
170 171 4.676018 GGTATTTCGACGCTACTCAATCTC 59.324 45.833 0.00 0.00 0.00 2.75
171 172 4.499357 GGGTATTTCGACGCTACTCAATCT 60.499 45.833 0.00 0.00 0.00 2.40
172 173 3.734735 GGGTATTTCGACGCTACTCAATC 59.265 47.826 0.00 0.00 0.00 2.67
173 174 3.714391 GGGTATTTCGACGCTACTCAAT 58.286 45.455 0.00 0.00 0.00 2.57
174 175 2.478370 CGGGTATTTCGACGCTACTCAA 60.478 50.000 0.00 0.00 0.00 3.02
175 176 1.064505 CGGGTATTTCGACGCTACTCA 59.935 52.381 0.00 0.00 0.00 3.41
176 177 1.064654 ACGGGTATTTCGACGCTACTC 59.935 52.381 0.00 0.00 0.00 2.59
177 178 1.098050 ACGGGTATTTCGACGCTACT 58.902 50.000 0.00 0.00 0.00 2.57
178 179 1.194495 CACGGGTATTTCGACGCTAC 58.806 55.000 0.00 0.00 0.00 3.58
179 180 1.064505 CTCACGGGTATTTCGACGCTA 59.935 52.381 0.00 0.00 0.00 4.26
180 181 0.179145 CTCACGGGTATTTCGACGCT 60.179 55.000 0.00 0.00 0.00 5.07
181 182 0.179156 TCTCACGGGTATTTCGACGC 60.179 55.000 0.00 0.00 0.00 5.19
182 183 2.117137 CATCTCACGGGTATTTCGACG 58.883 52.381 0.00 0.00 0.00 5.12
183 184 1.859080 GCATCTCACGGGTATTTCGAC 59.141 52.381 0.00 0.00 0.00 4.20
184 185 1.202486 GGCATCTCACGGGTATTTCGA 60.202 52.381 0.00 0.00 0.00 3.71
185 186 1.217882 GGCATCTCACGGGTATTTCG 58.782 55.000 0.00 0.00 0.00 3.46
186 187 1.594331 GGGCATCTCACGGGTATTTC 58.406 55.000 0.00 0.00 0.00 2.17
187 188 0.179056 CGGGCATCTCACGGGTATTT 60.179 55.000 0.00 0.00 0.00 1.40
188 189 1.335132 ACGGGCATCTCACGGGTATT 61.335 55.000 0.00 0.00 0.00 1.89
189 190 0.468585 TACGGGCATCTCACGGGTAT 60.469 55.000 0.00 0.00 0.00 2.73
190 191 0.683828 TTACGGGCATCTCACGGGTA 60.684 55.000 0.00 0.00 0.00 3.69
191 192 1.335132 ATTACGGGCATCTCACGGGT 61.335 55.000 0.00 0.00 0.00 5.28
192 193 0.880278 CATTACGGGCATCTCACGGG 60.880 60.000 0.00 0.00 0.00 5.28
193 194 1.498865 GCATTACGGGCATCTCACGG 61.499 60.000 0.00 0.00 0.00 4.94
194 195 0.530650 AGCATTACGGGCATCTCACG 60.531 55.000 0.00 0.00 0.00 4.35
195 196 1.221414 GAGCATTACGGGCATCTCAC 58.779 55.000 0.00 0.00 0.00 3.51
196 197 0.106708 GGAGCATTACGGGCATCTCA 59.893 55.000 0.00 0.00 0.00 3.27
197 198 0.946221 CGGAGCATTACGGGCATCTC 60.946 60.000 0.00 0.00 0.00 2.75
198 199 1.069765 CGGAGCATTACGGGCATCT 59.930 57.895 0.00 0.00 0.00 2.90
199 200 1.227556 ACGGAGCATTACGGGCATC 60.228 57.895 0.00 0.00 0.00 3.91
200 201 1.523711 CACGGAGCATTACGGGCAT 60.524 57.895 0.00 0.00 0.00 4.40
201 202 2.125310 CACGGAGCATTACGGGCA 60.125 61.111 0.00 0.00 0.00 5.36
203 204 3.261951 CGCACGGAGCATTACGGG 61.262 66.667 3.06 0.00 46.13 5.28
204 205 2.508439 ACGCACGGAGCATTACGG 60.508 61.111 3.06 0.00 46.13 4.02
205 206 1.076533 AAGACGCACGGAGCATTACG 61.077 55.000 3.06 0.00 46.13 3.18
206 207 0.370273 CAAGACGCACGGAGCATTAC 59.630 55.000 3.06 0.00 46.13 1.89
207 208 0.739462 CCAAGACGCACGGAGCATTA 60.739 55.000 3.06 0.00 46.13 1.90
208 209 2.034879 CCAAGACGCACGGAGCATT 61.035 57.895 3.06 0.00 46.13 3.56
209 210 2.244117 ATCCAAGACGCACGGAGCAT 62.244 55.000 3.06 0.00 46.13 3.79
210 211 2.449031 AATCCAAGACGCACGGAGCA 62.449 55.000 3.06 0.00 46.13 4.26
211 212 0.459585 TAATCCAAGACGCACGGAGC 60.460 55.000 0.00 0.00 40.87 4.70
212 213 2.225068 ATAATCCAAGACGCACGGAG 57.775 50.000 0.00 0.00 30.84 4.63
213 214 2.276201 CAATAATCCAAGACGCACGGA 58.724 47.619 0.00 0.00 0.00 4.69
214 215 2.006888 ACAATAATCCAAGACGCACGG 58.993 47.619 0.00 0.00 0.00 4.94
215 216 3.740044 AACAATAATCCAAGACGCACG 57.260 42.857 0.00 0.00 0.00 5.34
216 217 4.088648 CGAAACAATAATCCAAGACGCAC 58.911 43.478 0.00 0.00 0.00 5.34
217 218 3.126171 CCGAAACAATAATCCAAGACGCA 59.874 43.478 0.00 0.00 0.00 5.24
218 219 3.486875 CCCGAAACAATAATCCAAGACGC 60.487 47.826 0.00 0.00 0.00 5.19
219 220 3.687698 ACCCGAAACAATAATCCAAGACG 59.312 43.478 0.00 0.00 0.00 4.18
220 221 4.201783 CGACCCGAAACAATAATCCAAGAC 60.202 45.833 0.00 0.00 0.00 3.01
221 222 3.936453 CGACCCGAAACAATAATCCAAGA 59.064 43.478 0.00 0.00 0.00 3.02
222 223 3.486875 GCGACCCGAAACAATAATCCAAG 60.487 47.826 0.00 0.00 0.00 3.61
223 224 2.420722 GCGACCCGAAACAATAATCCAA 59.579 45.455 0.00 0.00 0.00 3.53
224 225 2.011222 GCGACCCGAAACAATAATCCA 58.989 47.619 0.00 0.00 0.00 3.41
225 226 1.332686 GGCGACCCGAAACAATAATCC 59.667 52.381 0.00 0.00 0.00 3.01
226 227 2.750301 GGCGACCCGAAACAATAATC 57.250 50.000 0.00 0.00 0.00 1.75
253 255 4.116747 GCTGTCAGCACTAAGTACTCAT 57.883 45.455 20.16 0.00 41.89 2.90
288 291 2.427095 GGTTTCACATATCCAGGGTTGC 59.573 50.000 0.00 0.00 0.00 4.17
418 421 1.497309 ATCCCGGAATGTGGTGGTGT 61.497 55.000 0.73 0.00 0.00 4.16
426 429 4.984161 CGTACGTAAATTATCCCGGAATGT 59.016 41.667 0.73 0.00 0.00 2.71
428 431 3.989817 GCGTACGTAAATTATCCCGGAAT 59.010 43.478 17.90 0.00 0.00 3.01
433 436 7.880059 ATAAAGAGCGTACGTAAATTATCCC 57.120 36.000 17.90 0.00 0.00 3.85
570 578 8.514136 TTATTAACACAATGTGCTTGTTTAGC 57.486 30.769 14.01 0.00 45.98 3.09
600 608 0.699399 TTCTCCCAAACGGGCCATAA 59.301 50.000 4.39 0.00 44.35 1.90
601 609 0.699399 TTTCTCCCAAACGGGCCATA 59.301 50.000 4.39 0.00 44.35 2.74
609 617 4.058124 GCAATGAAAGGTTTCTCCCAAAC 58.942 43.478 4.19 0.00 38.02 2.93
614 622 5.459536 AAGAAGCAATGAAAGGTTTCTCC 57.540 39.130 4.19 0.00 34.14 3.71
672 680 4.577096 TCCCCCTCTCATTACCACAATAT 58.423 43.478 0.00 0.00 0.00 1.28
674 682 2.858644 TCCCCCTCTCATTACCACAAT 58.141 47.619 0.00 0.00 0.00 2.71
680 688 4.080299 ACAGATGTTTCCCCCTCTCATTAC 60.080 45.833 0.00 0.00 0.00 1.89
689 697 0.112412 ACACCACAGATGTTTCCCCC 59.888 55.000 0.00 0.00 0.00 5.40
690 698 1.202879 TCACACCACAGATGTTTCCCC 60.203 52.381 0.00 0.00 0.00 4.81
691 699 2.270352 TCACACCACAGATGTTTCCC 57.730 50.000 0.00 0.00 0.00 3.97
692 700 3.411446 TCATCACACCACAGATGTTTCC 58.589 45.455 0.00 0.00 41.74 3.13
693 701 4.673580 GCATCATCACACCACAGATGTTTC 60.674 45.833 0.00 0.00 41.74 2.78
697 705 2.361789 TGCATCATCACACCACAGATG 58.638 47.619 0.00 0.00 42.25 2.90
814 825 4.506288 TGCTCGTTAACGTGATGGAATATG 59.494 41.667 28.58 8.21 40.80 1.78
815 826 4.506654 GTGCTCGTTAACGTGATGGAATAT 59.493 41.667 28.58 0.00 40.80 1.28
845 856 2.488545 ACATATACGGAGGAGATCGCAC 59.511 50.000 0.00 0.00 0.00 5.34
859 870 8.625651 AGATTAGTGTGACAGTCTGACATATAC 58.374 37.037 10.88 7.80 0.00 1.47
915 926 4.597507 GGGTGGATTTATAGTGGAGGATCA 59.402 45.833 0.00 0.00 36.25 2.92
942 954 1.750193 TGATGATTTGGGCGAGGTTC 58.250 50.000 0.00 0.00 0.00 3.62
1083 1096 2.125147 TCGCCCGCCTTCTTCATG 60.125 61.111 0.00 0.00 0.00 3.07
1124 1137 2.697761 TAGACGAGCACGCAGGTCC 61.698 63.158 2.62 0.00 41.71 4.46
1159 1172 3.703127 GGGGAAGAACTCCGGCGT 61.703 66.667 6.01 0.00 46.51 5.68
1168 1181 3.327404 GGCGTGGGAGGGGAAGAA 61.327 66.667 0.00 0.00 0.00 2.52
1245 1258 1.678970 GCCCGCCTGGTTCATCTTT 60.679 57.895 0.00 0.00 36.04 2.52
1428 1441 2.487428 CTCCTGAGGAGCACGTCG 59.513 66.667 16.73 0.00 43.29 5.12
1590 1606 0.610232 AGCCCTCCTGATGTTGTTGC 60.610 55.000 0.00 0.00 0.00 4.17
1591 1607 1.171308 CAGCCCTCCTGATGTTGTTG 58.829 55.000 0.00 0.00 44.64 3.33
1592 1608 0.038744 CCAGCCCTCCTGATGTTGTT 59.961 55.000 0.00 0.00 44.64 2.83
1599 1615 2.203983 TCAAGCCAGCCCTCCTGA 60.204 61.111 0.00 0.00 44.64 3.86
1634 1650 1.954362 CTGAGGGCCGAGGTCTTCTG 61.954 65.000 7.37 3.14 0.00 3.02
1648 1664 1.021390 CCACCGTAAAGCAGCTGAGG 61.021 60.000 20.43 12.03 0.00 3.86
1650 1666 1.671054 GCCACCGTAAAGCAGCTGA 60.671 57.895 20.43 0.00 0.00 4.26
1694 1710 2.440430 CGGAGGAGGAGAAGCCGA 60.440 66.667 0.00 0.00 44.43 5.54
1711 1727 6.051074 TCATCATCATATTCATATCACCGCC 58.949 40.000 0.00 0.00 0.00 6.13
1716 1732 7.228706 GGCTGCATCATCATCATATTCATATCA 59.771 37.037 0.50 0.00 0.00 2.15
1794 1811 1.689273 CTCACCACCATCCTAGGTAGC 59.311 57.143 9.08 0.00 40.77 3.58
1815 1832 1.608025 GCGGCCGGAGATGAAATGATA 60.608 52.381 29.38 0.00 0.00 2.15
1819 1836 2.203209 GGCGGCCGGAGATGAAAT 60.203 61.111 29.38 0.00 0.00 2.17
1849 1866 3.834799 GGAAGCTGCTGGCCATGC 61.835 66.667 5.51 13.30 43.05 4.06
1850 1867 3.515286 CGGAAGCTGCTGGCCATG 61.515 66.667 5.51 1.08 43.05 3.66
1851 1868 4.039092 ACGGAAGCTGCTGGCCAT 62.039 61.111 5.51 3.98 43.05 4.40
1869 1886 3.712091 ATAAGAACGTGACCGAGATCC 57.288 47.619 0.00 0.00 37.88 3.36
2016 2033 8.594881 AGTAGAATTATAAATGACTTGGCTCG 57.405 34.615 0.00 0.00 0.00 5.03
2089 2356 5.444218 GCTTACGATTTACGACCAACTGAAG 60.444 44.000 0.00 0.00 45.77 3.02
2129 2396 5.833406 TGTCTGACAAAACATTGTGACAT 57.167 34.783 8.27 0.00 34.80 3.06
2185 2453 9.066892 CCCACACAAACTATGCAAGTATATAAT 57.933 33.333 0.00 0.00 37.50 1.28
2210 2480 3.121544 GCTAGTTGACTGCCGTAATACC 58.878 50.000 0.00 0.00 0.00 2.73
2277 2547 5.675684 ATTCTGGACACCAAAAACAAACT 57.324 34.783 0.00 0.00 30.80 2.66
2344 2614 2.557924 CAGCACATTTACCTTTGCTCCA 59.442 45.455 0.00 0.00 43.49 3.86
2345 2615 2.094545 CCAGCACATTTACCTTTGCTCC 60.095 50.000 0.00 0.00 43.49 4.70
2347 2617 2.875296 TCCAGCACATTTACCTTTGCT 58.125 42.857 0.00 0.00 46.27 3.91
2348 2618 3.514645 CATCCAGCACATTTACCTTTGC 58.485 45.455 0.00 0.00 35.08 3.68
2349 2619 3.511146 ACCATCCAGCACATTTACCTTTG 59.489 43.478 0.00 0.00 0.00 2.77
2350 2620 3.778265 ACCATCCAGCACATTTACCTTT 58.222 40.909 0.00 0.00 0.00 3.11
2352 2622 3.245229 TGAACCATCCAGCACATTTACCT 60.245 43.478 0.00 0.00 0.00 3.08
2353 2623 3.088532 TGAACCATCCAGCACATTTACC 58.911 45.455 0.00 0.00 0.00 2.85
2354 2624 4.641989 AGATGAACCATCCAGCACATTTAC 59.358 41.667 3.55 0.00 41.36 2.01
2355 2625 4.641541 CAGATGAACCATCCAGCACATTTA 59.358 41.667 3.55 0.00 41.36 1.40
2356 2626 3.446161 CAGATGAACCATCCAGCACATTT 59.554 43.478 3.55 0.00 41.36 2.32
2357 2627 3.021695 CAGATGAACCATCCAGCACATT 58.978 45.455 3.55 0.00 41.36 2.71
2358 2628 2.025605 ACAGATGAACCATCCAGCACAT 60.026 45.455 3.55 0.00 41.36 3.21
2359 2629 1.352017 ACAGATGAACCATCCAGCACA 59.648 47.619 3.55 0.00 41.36 4.57
2360 2630 1.741706 CACAGATGAACCATCCAGCAC 59.258 52.381 3.55 0.00 41.36 4.40
2361 2631 1.951895 GCACAGATGAACCATCCAGCA 60.952 52.381 3.55 0.00 41.36 4.41
2362 2632 0.737219 GCACAGATGAACCATCCAGC 59.263 55.000 3.55 2.66 41.36 4.85
2363 2633 1.064906 AGGCACAGATGAACCATCCAG 60.065 52.381 3.55 0.57 41.36 3.86
2364 2634 0.994247 AGGCACAGATGAACCATCCA 59.006 50.000 3.55 0.00 41.36 3.41
2365 2635 1.386533 CAGGCACAGATGAACCATCC 58.613 55.000 3.55 0.00 41.36 3.51
2366 2636 1.065199 TCCAGGCACAGATGAACCATC 60.065 52.381 0.00 0.00 40.80 3.51
2367 2637 0.994247 TCCAGGCACAGATGAACCAT 59.006 50.000 0.00 0.00 0.00 3.55
2368 2638 0.994247 ATCCAGGCACAGATGAACCA 59.006 50.000 0.00 0.00 0.00 3.67
2369 2639 3.281727 TTATCCAGGCACAGATGAACC 57.718 47.619 0.00 0.00 0.00 3.62
2370 2640 6.942532 TTAATTATCCAGGCACAGATGAAC 57.057 37.500 0.00 0.00 0.00 3.18
2371 2641 7.289310 TCATTAATTATCCAGGCACAGATGAA 58.711 34.615 0.00 0.00 0.00 2.57
2372 2642 6.840527 TCATTAATTATCCAGGCACAGATGA 58.159 36.000 0.00 0.00 0.00 2.92
2373 2643 7.698506 ATCATTAATTATCCAGGCACAGATG 57.301 36.000 0.00 0.00 0.00 2.90
2378 2648 5.630680 CGCAAATCATTAATTATCCAGGCAC 59.369 40.000 0.00 0.00 0.00 5.01
2401 2671 6.128282 ACAGCTTTCACCATGTAATTAAGTCG 60.128 38.462 0.00 0.00 0.00 4.18
2417 2687 5.611374 AGCAGTTAACTAGAACAGCTTTCA 58.389 37.500 8.04 0.00 46.40 2.69
2446 2716 8.556213 AGTAATAAAGCGTGGTATTTCTCAAA 57.444 30.769 0.00 0.00 0.00 2.69
2449 2719 7.766219 TGAGTAATAAAGCGTGGTATTTCTC 57.234 36.000 10.75 10.75 35.93 2.87
2460 2730 7.577979 TGTGGTAAACTTTGAGTAATAAAGCG 58.422 34.615 0.00 0.00 38.41 4.68
2489 2759 4.292306 ACCCCATGATCCTATTTGTATCCC 59.708 45.833 0.00 0.00 0.00 3.85
2515 2785 2.810439 TGTGCCATGTTTGGTTAAGC 57.190 45.000 0.00 0.00 45.57 3.09
2534 2804 8.507249 CAAGTTTTCTCGGTCTTTAAATCAGAT 58.493 33.333 0.00 0.00 0.00 2.90
2535 2805 7.041372 CCAAGTTTTCTCGGTCTTTAAATCAGA 60.041 37.037 0.00 0.00 0.00 3.27
2555 2825 3.578282 CCAAGCCCAATTACTTCCAAGTT 59.422 43.478 0.00 0.00 40.37 2.66
2568 2839 7.179269 ACAGTTAATTAGAATACCAAGCCCAA 58.821 34.615 0.00 0.00 0.00 4.12
2616 2888 3.676049 GCATTGGTGATAGTCAGACGACA 60.676 47.826 0.00 0.00 45.23 4.35
2617 2889 2.860735 GCATTGGTGATAGTCAGACGAC 59.139 50.000 0.00 0.00 42.95 4.34
2618 2890 2.479560 CGCATTGGTGATAGTCAGACGA 60.480 50.000 0.00 0.00 0.00 4.20
2619 2891 1.854743 CGCATTGGTGATAGTCAGACG 59.145 52.381 0.00 0.00 0.00 4.18
2620 2892 2.205074 CCGCATTGGTGATAGTCAGAC 58.795 52.381 0.00 0.00 0.00 3.51
2621 2893 1.473257 GCCGCATTGGTGATAGTCAGA 60.473 52.381 0.00 0.00 41.21 3.27
2622 2894 0.940126 GCCGCATTGGTGATAGTCAG 59.060 55.000 0.00 0.00 41.21 3.51
2623 2895 0.251634 TGCCGCATTGGTGATAGTCA 59.748 50.000 0.00 0.00 41.21 3.41
2624 2896 1.378531 TTGCCGCATTGGTGATAGTC 58.621 50.000 0.00 0.00 41.21 2.59
2625 2897 1.472480 GTTTGCCGCATTGGTGATAGT 59.528 47.619 0.00 0.00 41.21 2.12
2626 2898 1.202290 GGTTTGCCGCATTGGTGATAG 60.202 52.381 0.00 0.00 41.21 2.08
2627 2899 0.814457 GGTTTGCCGCATTGGTGATA 59.186 50.000 0.00 0.00 41.21 2.15
2628 2900 1.184322 TGGTTTGCCGCATTGGTGAT 61.184 50.000 0.00 0.00 41.21 3.06
2629 2901 1.804396 CTGGTTTGCCGCATTGGTGA 61.804 55.000 0.00 0.00 41.21 4.02
2630 2902 1.373246 CTGGTTTGCCGCATTGGTG 60.373 57.895 0.00 0.00 41.21 4.17
2631 2903 1.530419 TCTGGTTTGCCGCATTGGT 60.530 52.632 0.00 0.00 41.21 3.67
2632 2904 1.080569 GTCTGGTTTGCCGCATTGG 60.081 57.895 0.00 0.00 42.50 3.16
2633 2905 1.080569 GGTCTGGTTTGCCGCATTG 60.081 57.895 0.00 0.00 37.67 2.82
2634 2906 2.275380 GGGTCTGGTTTGCCGCATT 61.275 57.895 0.00 0.00 37.67 3.56
2635 2907 2.676471 GGGTCTGGTTTGCCGCAT 60.676 61.111 0.00 0.00 37.67 4.73
2636 2908 3.884774 AGGGTCTGGTTTGCCGCA 61.885 61.111 0.00 0.00 37.67 5.69
2637 2909 3.365265 CAGGGTCTGGTTTGCCGC 61.365 66.667 0.00 0.00 37.67 6.53
2638 2910 2.113139 ACAGGGTCTGGTTTGCCG 59.887 61.111 0.00 0.00 35.51 5.69
2639 2911 1.152756 ACACAGGGTCTGGTTTGCC 60.153 57.895 0.00 0.00 35.51 4.52
2640 2912 2.331265 GACACAGGGTCTGGTTTGC 58.669 57.895 0.00 0.00 43.46 3.68
2641 2913 5.321023 ACTCTGACACAGGGTCTGGTTTG 62.321 52.174 9.66 1.81 42.02 2.93
2642 2914 3.226293 ACTCTGACACAGGGTCTGGTTT 61.226 50.000 9.66 0.00 42.02 3.27
2643 2915 1.692762 ACTCTGACACAGGGTCTGGTT 60.693 52.381 9.66 0.00 42.02 3.67
2644 2916 0.105453 ACTCTGACACAGGGTCTGGT 60.105 55.000 9.66 4.33 42.02 4.00
2645 2917 0.319728 CACTCTGACACAGGGTCTGG 59.680 60.000 9.66 3.76 42.02 3.86
2646 2918 1.000283 GACACTCTGACACAGGGTCTG 60.000 57.143 5.91 3.58 42.02 3.51
2647 2919 1.133325 AGACACTCTGACACAGGGTCT 60.133 52.381 9.62 9.62 42.02 3.85
2648 2920 1.271102 GAGACACTCTGACACAGGGTC 59.729 57.143 5.04 5.04 42.02 4.46
2650 2922 0.242286 CGAGACACTCTGACACAGGG 59.758 60.000 0.00 0.00 38.07 4.45
2651 2923 0.387878 GCGAGACACTCTGACACAGG 60.388 60.000 0.00 0.00 31.51 4.00
2652 2924 0.387878 GGCGAGACACTCTGACACAG 60.388 60.000 0.00 0.00 0.00 3.66
2653 2925 1.660355 GGCGAGACACTCTGACACA 59.340 57.895 0.00 0.00 0.00 3.72
2654 2926 1.080434 GGGCGAGACACTCTGACAC 60.080 63.158 0.00 0.00 0.00 3.67
2655 2927 0.827925 AAGGGCGAGACACTCTGACA 60.828 55.000 0.00 0.00 0.00 3.58
2656 2928 0.109039 GAAGGGCGAGACACTCTGAC 60.109 60.000 0.00 0.00 0.00 3.51
2657 2929 0.251386 AGAAGGGCGAGACACTCTGA 60.251 55.000 0.00 0.00 0.00 3.27
2658 2930 1.403679 CTAGAAGGGCGAGACACTCTG 59.596 57.143 0.00 0.00 0.00 3.35
2659 2931 1.683629 CCTAGAAGGGCGAGACACTCT 60.684 57.143 0.00 0.00 0.00 3.24
2660 2932 0.741915 CCTAGAAGGGCGAGACACTC 59.258 60.000 0.00 0.00 0.00 3.51
2661 2933 0.331954 TCCTAGAAGGGCGAGACACT 59.668 55.000 0.00 0.00 35.59 3.55
2662 2934 1.404843 ATCCTAGAAGGGCGAGACAC 58.595 55.000 0.00 0.00 35.59 3.67
2663 2935 2.865079 CTATCCTAGAAGGGCGAGACA 58.135 52.381 0.00 0.00 35.59 3.41
2664 2936 1.542472 GCTATCCTAGAAGGGCGAGAC 59.458 57.143 0.00 0.00 35.59 3.36
2665 2937 1.425831 AGCTATCCTAGAAGGGCGAGA 59.574 52.381 0.00 0.00 35.59 4.04
2666 2938 1.816224 GAGCTATCCTAGAAGGGCGAG 59.184 57.143 0.00 0.00 35.59 5.03
2667 2939 1.425831 AGAGCTATCCTAGAAGGGCGA 59.574 52.381 0.00 0.00 35.59 5.54
2668 2940 1.816224 GAGAGCTATCCTAGAAGGGCG 59.184 57.143 0.00 0.00 35.59 6.13
2669 2941 2.176045 GGAGAGCTATCCTAGAAGGGC 58.824 57.143 20.39 0.00 35.59 5.19
2670 2942 3.161866 GTGGAGAGCTATCCTAGAAGGG 58.838 54.545 26.94 0.00 40.29 3.95
2671 2943 3.572255 GTGTGGAGAGCTATCCTAGAAGG 59.428 52.174 26.94 0.00 40.29 3.46
2672 2944 3.572255 GGTGTGGAGAGCTATCCTAGAAG 59.428 52.174 26.94 0.00 40.29 2.85
2673 2945 3.205507 AGGTGTGGAGAGCTATCCTAGAA 59.794 47.826 26.94 4.93 40.29 2.10
2674 2946 2.786445 AGGTGTGGAGAGCTATCCTAGA 59.214 50.000 26.94 10.29 40.29 2.43
2675 2947 2.890311 CAGGTGTGGAGAGCTATCCTAG 59.110 54.545 26.94 7.73 40.29 3.02
2676 2948 2.950781 CAGGTGTGGAGAGCTATCCTA 58.049 52.381 26.94 14.04 40.29 2.94
2677 2949 1.786937 CAGGTGTGGAGAGCTATCCT 58.213 55.000 26.94 4.53 40.29 3.24
2678 2950 0.105778 GCAGGTGTGGAGAGCTATCC 59.894 60.000 20.85 20.85 40.03 2.59
2679 2951 0.249238 CGCAGGTGTGGAGAGCTATC 60.249 60.000 0.00 0.00 0.00 2.08
2680 2952 0.684479 TCGCAGGTGTGGAGAGCTAT 60.684 55.000 0.00 0.00 0.00 2.97
2681 2953 0.684479 ATCGCAGGTGTGGAGAGCTA 60.684 55.000 0.00 0.00 0.00 3.32
2682 2954 1.986757 ATCGCAGGTGTGGAGAGCT 60.987 57.895 0.00 0.00 0.00 4.09
2683 2955 1.812922 CATCGCAGGTGTGGAGAGC 60.813 63.158 0.00 0.00 0.00 4.09
2684 2956 1.153489 CCATCGCAGGTGTGGAGAG 60.153 63.158 0.00 0.00 34.94 3.20
2685 2957 2.981302 CCATCGCAGGTGTGGAGA 59.019 61.111 0.00 0.00 34.94 3.71
2686 2958 2.821366 GCCATCGCAGGTGTGGAG 60.821 66.667 0.00 0.00 34.94 3.86
2687 2959 4.758251 CGCCATCGCAGGTGTGGA 62.758 66.667 0.00 0.00 34.94 4.02
2709 2981 3.515286 CTGCATGCCGAGCTTGGG 61.515 66.667 22.06 11.19 34.84 4.12
2710 2982 1.588824 TTTCTGCATGCCGAGCTTGG 61.589 55.000 16.53 16.53 34.84 3.61
2711 2983 0.241749 TTTTCTGCATGCCGAGCTTG 59.758 50.000 16.68 0.00 36.88 4.01
2712 2984 1.133790 GATTTTCTGCATGCCGAGCTT 59.866 47.619 16.68 2.42 0.00 3.74
2713 2985 0.737219 GATTTTCTGCATGCCGAGCT 59.263 50.000 16.68 2.60 0.00 4.09
2714 2986 0.452987 TGATTTTCTGCATGCCGAGC 59.547 50.000 16.68 5.91 0.00 5.03
2715 2987 1.741706 AGTGATTTTCTGCATGCCGAG 59.258 47.619 16.68 7.00 0.00 4.63
2716 2988 1.739466 GAGTGATTTTCTGCATGCCGA 59.261 47.619 16.68 12.12 0.00 5.54
2717 2989 1.530441 CGAGTGATTTTCTGCATGCCG 60.530 52.381 16.68 9.39 0.00 5.69
2718 2990 1.739466 TCGAGTGATTTTCTGCATGCC 59.261 47.619 16.68 0.00 0.00 4.40
2719 2991 3.423571 CTTCGAGTGATTTTCTGCATGC 58.576 45.455 11.82 11.82 0.00 4.06
2720 2992 3.686241 TCCTTCGAGTGATTTTCTGCATG 59.314 43.478 0.00 0.00 0.00 4.06
2721 2993 3.942829 TCCTTCGAGTGATTTTCTGCAT 58.057 40.909 0.00 0.00 0.00 3.96
2722 2994 3.401033 TCCTTCGAGTGATTTTCTGCA 57.599 42.857 0.00 0.00 0.00 4.41
2723 2995 4.749245 TTTCCTTCGAGTGATTTTCTGC 57.251 40.909 0.00 0.00 0.00 4.26
2724 2996 7.602517 AGTATTTCCTTCGAGTGATTTTCTG 57.397 36.000 0.00 0.00 0.00 3.02
2725 2997 9.372369 CTAAGTATTTCCTTCGAGTGATTTTCT 57.628 33.333 0.00 0.00 0.00 2.52
2726 2998 8.117370 GCTAAGTATTTCCTTCGAGTGATTTTC 58.883 37.037 0.00 0.00 0.00 2.29
2727 2999 7.824779 AGCTAAGTATTTCCTTCGAGTGATTTT 59.175 33.333 0.00 0.00 0.00 1.82
2728 3000 7.331791 AGCTAAGTATTTCCTTCGAGTGATTT 58.668 34.615 0.00 0.00 0.00 2.17
2729 3001 6.879400 AGCTAAGTATTTCCTTCGAGTGATT 58.121 36.000 0.00 0.00 0.00 2.57
2730 3002 6.472686 AGCTAAGTATTTCCTTCGAGTGAT 57.527 37.500 0.00 0.00 0.00 3.06
2731 3003 5.448768 CGAGCTAAGTATTTCCTTCGAGTGA 60.449 44.000 0.00 0.00 0.00 3.41
2732 3004 4.735822 CGAGCTAAGTATTTCCTTCGAGTG 59.264 45.833 0.00 0.00 0.00 3.51
2733 3005 4.398673 ACGAGCTAAGTATTTCCTTCGAGT 59.601 41.667 0.00 0.00 0.00 4.18
2734 3006 4.922719 ACGAGCTAAGTATTTCCTTCGAG 58.077 43.478 0.00 0.00 0.00 4.04
2735 3007 4.978083 ACGAGCTAAGTATTTCCTTCGA 57.022 40.909 0.00 0.00 0.00 3.71
2736 3008 6.057627 TCTACGAGCTAAGTATTTCCTTCG 57.942 41.667 2.47 0.00 0.00 3.79
2737 3009 8.874744 AATTCTACGAGCTAAGTATTTCCTTC 57.125 34.615 2.47 0.00 0.00 3.46
2738 3010 7.648510 CGAATTCTACGAGCTAAGTATTTCCTT 59.351 37.037 3.52 0.00 0.00 3.36
2739 3011 7.140048 CGAATTCTACGAGCTAAGTATTTCCT 58.860 38.462 3.52 0.00 0.00 3.36
2740 3012 6.916932 ACGAATTCTACGAGCTAAGTATTTCC 59.083 38.462 3.52 0.00 34.70 3.13
2741 3013 7.565431 GCACGAATTCTACGAGCTAAGTATTTC 60.565 40.741 3.52 5.94 42.10 2.17
2742 3014 6.198591 GCACGAATTCTACGAGCTAAGTATTT 59.801 38.462 3.52 0.00 42.10 1.40
2743 3015 5.686397 GCACGAATTCTACGAGCTAAGTATT 59.314 40.000 3.52 0.00 42.10 1.89
2744 3016 5.213675 GCACGAATTCTACGAGCTAAGTAT 58.786 41.667 3.52 0.00 42.10 2.12
2745 3017 4.095334 TGCACGAATTCTACGAGCTAAGTA 59.905 41.667 3.52 0.00 44.59 2.24
2746 3018 3.119602 TGCACGAATTCTACGAGCTAAGT 60.120 43.478 3.52 0.00 44.59 2.24
2747 3019 3.240861 GTGCACGAATTCTACGAGCTAAG 59.759 47.826 0.00 0.00 44.59 2.18
2748 3020 3.176708 GTGCACGAATTCTACGAGCTAA 58.823 45.455 0.00 0.00 44.59 3.09
2749 3021 2.479049 GGTGCACGAATTCTACGAGCTA 60.479 50.000 11.45 0.00 44.59 3.32
2750 3022 1.630148 GTGCACGAATTCTACGAGCT 58.370 50.000 0.00 0.00 44.59 4.09
2751 3023 0.645868 GGTGCACGAATTCTACGAGC 59.354 55.000 11.45 2.33 44.57 5.03
2763 3035 4.742201 CACCTCCCTCGGTGCACG 62.742 72.222 11.45 6.55 46.98 5.34
2768 3040 2.037527 GACTCCACCTCCCTCGGT 59.962 66.667 0.00 0.00 37.93 4.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.