Multiple sequence alignment - TraesCS6B01G390100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G390100 chr6B 100.000 3523 0 0 1 3523 664499193 664502715 0.000000e+00 6506.0
1 TraesCS6B01G390100 chr6B 90.267 1048 72 8 823 1840 664520255 664521302 0.000000e+00 1343.0
2 TraesCS6B01G390100 chr6B 86.275 510 42 9 2030 2527 664521296 664521789 2.410000e-146 529.0
3 TraesCS6B01G390100 chr6B 94.089 203 11 1 1835 2037 88874661 88874460 1.230000e-79 307.0
4 TraesCS6B01G390100 chr6A 89.639 1052 70 8 823 1840 587967250 587968296 0.000000e+00 1303.0
5 TraesCS6B01G390100 chr6A 88.443 1047 79 16 823 1838 587895533 587894498 0.000000e+00 1225.0
6 TraesCS6B01G390100 chr6A 89.264 503 45 6 2030 2527 587894239 587893741 3.860000e-174 621.0
7 TraesCS6B01G390100 chr6A 88.560 507 42 7 2030 2527 587968290 587968789 5.030000e-168 601.0
8 TraesCS6B01G390100 chr6A 79.138 441 59 17 319 727 587965294 587965733 1.250000e-69 274.0
9 TraesCS6B01G390100 chr6A 80.237 253 39 8 2039 2284 587894493 587894245 2.790000e-41 180.0
10 TraesCS6B01G390100 chr6A 84.286 70 9 2 2803 2871 221819740 221819672 2.270000e-07 67.6
11 TraesCS6B01G390100 chr6D 88.275 1049 95 16 823 1849 439621027 439619985 0.000000e+00 1230.0
12 TraesCS6B01G390100 chr6D 88.185 1058 83 13 820 1839 439655239 439656292 0.000000e+00 1223.0
13 TraesCS6B01G390100 chr6D 87.083 689 77 11 85 765 439654439 439655123 0.000000e+00 769.0
14 TraesCS6B01G390100 chr6D 90.763 498 41 5 2030 2527 439656287 439656779 0.000000e+00 660.0
15 TraesCS6B01G390100 chr6D 85.573 506 59 8 2029 2527 439620002 439619504 5.210000e-143 518.0
16 TraesCS6B01G390100 chr6D 91.892 185 11 2 1842 2026 115641147 115641327 4.510000e-64 255.0
17 TraesCS6B01G390100 chr6D 97.101 138 4 0 1842 1979 19352693 19352556 2.110000e-57 233.0
18 TraesCS6B01G390100 chr7A 83.016 736 64 31 2798 3523 16125377 16126061 8.360000e-171 610.0
19 TraesCS6B01G390100 chr7A 96.341 82 3 0 1 82 538339946 538340027 6.130000e-28 135.0
20 TraesCS6B01G390100 chr4D 92.348 379 23 6 3147 3523 338011981 338011607 5.180000e-148 534.0
21 TraesCS6B01G390100 chr4D 91.333 300 23 1 2797 3096 338012279 338011983 1.180000e-109 407.0
22 TraesCS6B01G390100 chr4D 96.341 82 3 0 1 82 431039864 431039945 6.130000e-28 135.0
23 TraesCS6B01G390100 chr7B 90.237 379 33 4 3147 3523 706672665 706672289 3.160000e-135 492.0
24 TraesCS6B01G390100 chr7B 74.884 215 52 2 2798 3011 219675853 219675640 2.890000e-16 97.1
25 TraesCS6B01G390100 chr7B 83.099 71 11 1 2840 2909 646038941 646039011 2.940000e-06 63.9
26 TraesCS6B01G390100 chr7B 83.099 71 11 1 2840 2909 646039785 646039855 2.940000e-06 63.9
27 TraesCS6B01G390100 chr3D 84.932 511 34 16 3013 3521 113460247 113460716 8.850000e-131 477.0
28 TraesCS6B01G390100 chr5A 86.579 380 26 14 3147 3523 636286519 636286876 2.550000e-106 396.0
29 TraesCS6B01G390100 chr5A 89.803 304 25 4 2798 3096 636286212 636286514 5.520000e-103 385.0
30 TraesCS6B01G390100 chr5A 99.468 188 0 1 1842 2029 681490348 681490534 1.210000e-89 340.0
31 TraesCS6B01G390100 chr5A 86.364 66 8 1 2840 2904 520119898 520119833 1.750000e-08 71.3
32 TraesCS6B01G390100 chr2A 98.958 192 0 2 1840 2031 51670662 51670851 3.370000e-90 342.0
33 TraesCS6B01G390100 chr2A 97.561 82 2 0 1 82 571906385 571906304 1.320000e-29 141.0
34 TraesCS6B01G390100 chr4A 96.809 188 5 1 1842 2029 739917153 739917339 2.640000e-81 313.0
35 TraesCS6B01G390100 chr4A 84.746 295 26 13 3147 3439 597034083 597034360 9.630000e-71 278.0
36 TraesCS6B01G390100 chr4A 92.021 188 10 3 1842 2029 713902132 713901950 3.490000e-65 259.0
37 TraesCS6B01G390100 chr5B 96.296 189 5 2 1843 2031 94085881 94086067 3.420000e-80 309.0
38 TraesCS6B01G390100 chr5B 89.189 222 22 2 3302 3523 325547848 325547629 3.460000e-70 276.0
39 TraesCS6B01G390100 chr5B 92.708 192 10 3 1840 2029 54204862 54205051 1.250000e-69 274.0
40 TraesCS6B01G390100 chr5B 96.341 82 3 0 1 82 575244806 575244725 6.130000e-28 135.0
41 TraesCS6B01G390100 chr5B 93.333 90 4 2 1 89 529194154 529194242 7.940000e-27 132.0
42 TraesCS6B01G390100 chr3B 83.562 219 32 3 2578 2795 222796834 222797049 5.960000e-48 202.0
43 TraesCS6B01G390100 chr7D 96.341 82 3 0 1 82 510953448 510953367 6.130000e-28 135.0
44 TraesCS6B01G390100 chr4B 96.341 82 3 0 1 82 575530249 575530168 6.130000e-28 135.0
45 TraesCS6B01G390100 chr2B 96.341 82 3 0 1 82 477512266 477512347 6.130000e-28 135.0
46 TraesCS6B01G390100 chr1D 96.341 82 3 0 1 82 7424097 7424178 6.130000e-28 135.0
47 TraesCS6B01G390100 chr3A 86.364 66 8 1 2840 2904 382361032 382361097 1.750000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G390100 chr6B 664499193 664502715 3522 False 6506.000000 6506 100.000000 1 3523 1 chr6B.!!$F1 3522
1 TraesCS6B01G390100 chr6B 664520255 664521789 1534 False 936.000000 1343 88.271000 823 2527 2 chr6B.!!$F2 1704
2 TraesCS6B01G390100 chr6A 587965294 587968789 3495 False 726.000000 1303 85.779000 319 2527 3 chr6A.!!$F1 2208
3 TraesCS6B01G390100 chr6A 587893741 587895533 1792 True 675.333333 1225 85.981333 823 2527 3 chr6A.!!$R2 1704
4 TraesCS6B01G390100 chr6D 439654439 439656779 2340 False 884.000000 1223 88.677000 85 2527 3 chr6D.!!$F2 2442
5 TraesCS6B01G390100 chr6D 439619504 439621027 1523 True 874.000000 1230 86.924000 823 2527 2 chr6D.!!$R2 1704
6 TraesCS6B01G390100 chr7A 16125377 16126061 684 False 610.000000 610 83.016000 2798 3523 1 chr7A.!!$F1 725
7 TraesCS6B01G390100 chr4D 338011607 338012279 672 True 470.500000 534 91.840500 2797 3523 2 chr4D.!!$R1 726
8 TraesCS6B01G390100 chr5A 636286212 636286876 664 False 390.500000 396 88.191000 2798 3523 2 chr5A.!!$F2 725

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
983 2458 0.179045 CTCGAATCCCCTCGCCATTT 60.179 55.0 0.0 0.0 38.73 2.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2545 4354 0.025001 GATGATTGTTGCGACGGACG 59.975 55.0 0.0 0.0 45.66 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 2.278332 GCCTAGGCCCTGGATTTTAG 57.722 55.000 24.19 0.33 34.56 1.85
29 30 1.202940 GCCTAGGCCCTGGATTTTAGG 60.203 57.143 24.19 10.45 34.56 2.69
34 35 4.579127 CCTGGATTTTAGGGCCGG 57.421 61.111 0.00 0.00 0.00 6.13
35 36 1.152756 CCTGGATTTTAGGGCCGGG 60.153 63.158 2.18 0.00 41.55 5.73
36 37 1.828224 CTGGATTTTAGGGCCGGGC 60.828 63.158 22.00 22.00 0.00 6.13
80 81 1.786937 CTGAGATGGCCAGGACTACT 58.213 55.000 13.05 3.29 0.00 2.57
81 82 1.686052 CTGAGATGGCCAGGACTACTC 59.314 57.143 13.05 12.72 0.00 2.59
82 83 1.007118 TGAGATGGCCAGGACTACTCA 59.993 52.381 13.05 15.10 0.00 3.41
83 84 2.324541 GAGATGGCCAGGACTACTCAT 58.675 52.381 13.05 0.00 0.00 2.90
84 85 3.117131 TGAGATGGCCAGGACTACTCATA 60.117 47.826 13.05 0.00 0.00 2.15
85 86 3.898123 GAGATGGCCAGGACTACTCATAA 59.102 47.826 13.05 0.00 0.00 1.90
86 87 3.900601 AGATGGCCAGGACTACTCATAAG 59.099 47.826 13.05 0.00 0.00 1.73
87 88 1.762957 TGGCCAGGACTACTCATAAGC 59.237 52.381 0.00 0.00 0.00 3.09
88 89 2.043227 GGCCAGGACTACTCATAAGCT 58.957 52.381 0.00 0.00 0.00 3.74
89 90 3.231818 GGCCAGGACTACTCATAAGCTA 58.768 50.000 0.00 0.00 0.00 3.32
90 91 3.257127 GGCCAGGACTACTCATAAGCTAG 59.743 52.174 0.00 0.00 0.00 3.42
91 92 3.257127 GCCAGGACTACTCATAAGCTAGG 59.743 52.174 0.00 0.00 0.00 3.02
92 93 4.730966 CCAGGACTACTCATAAGCTAGGA 58.269 47.826 0.00 0.00 0.00 2.94
93 94 4.521256 CCAGGACTACTCATAAGCTAGGAC 59.479 50.000 0.00 0.00 0.00 3.85
94 95 4.521256 CAGGACTACTCATAAGCTAGGACC 59.479 50.000 0.00 0.00 0.00 4.46
100 101 2.952978 CTCATAAGCTAGGACCGTCACT 59.047 50.000 0.00 0.00 0.00 3.41
105 106 1.035932 GCTAGGACCGTCACTAGGCA 61.036 60.000 18.26 0.00 37.69 4.75
132 133 6.672218 TGTCTATCTCTGGATAGGAAACCAAA 59.328 38.462 11.54 0.00 46.84 3.28
133 134 7.147655 TGTCTATCTCTGGATAGGAAACCAAAG 60.148 40.741 11.54 0.00 46.84 2.77
165 166 2.850060 CGCAATTGAGCTAACATGCAAG 59.150 45.455 10.34 0.00 35.35 4.01
195 196 0.750546 TCAGCTCCATGCCATTGCTC 60.751 55.000 0.00 0.00 44.23 4.26
203 204 1.381928 ATGCCATTGCTCGAAGCCAG 61.382 55.000 4.73 0.00 41.51 4.85
205 206 1.712977 GCCATTGCTCGAAGCCAGAG 61.713 60.000 4.73 0.00 41.51 3.35
207 208 1.005340 CATTGCTCGAAGCCAGAGTC 58.995 55.000 4.73 0.00 41.51 3.36
208 209 0.901124 ATTGCTCGAAGCCAGAGTCT 59.099 50.000 4.73 0.00 41.51 3.24
210 211 1.226547 GCTCGAAGCCAGAGTCTCG 60.227 63.158 0.00 0.00 37.99 4.04
212 213 0.523966 CTCGAAGCCAGAGTCTCGTT 59.476 55.000 0.00 0.00 0.00 3.85
216 217 2.608268 GAAGCCAGAGTCTCGTTAACC 58.392 52.381 0.00 0.00 0.00 2.85
217 218 1.926108 AGCCAGAGTCTCGTTAACCT 58.074 50.000 0.00 0.00 0.00 3.50
222 223 2.028930 CAGAGTCTCGTTAACCTTGGCT 60.029 50.000 0.00 0.00 0.00 4.75
229 230 2.619646 TCGTTAACCTTGGCTTTGTTCC 59.380 45.455 0.00 0.00 0.00 3.62
232 233 0.752658 AACCTTGGCTTTGTTCCTGC 59.247 50.000 0.00 0.00 0.00 4.85
254 255 1.071228 TGCCTTGGATCATCATCTCGG 59.929 52.381 0.00 0.00 0.00 4.63
257 258 1.071228 CTTGGATCATCATCTCGGGCA 59.929 52.381 0.00 0.00 0.00 5.36
259 260 1.490069 TGGATCATCATCTCGGGCAAA 59.510 47.619 0.00 0.00 0.00 3.68
264 265 2.487762 TCATCATCTCGGGCAAAACAAC 59.512 45.455 0.00 0.00 0.00 3.32
265 266 1.974265 TCATCTCGGGCAAAACAACA 58.026 45.000 0.00 0.00 0.00 3.33
276 277 2.134346 CAAAACAACATCCAAAGCCGG 58.866 47.619 0.00 0.00 0.00 6.13
289 290 3.065371 CCAAAGCCGGAGAATCATAACAC 59.935 47.826 5.05 0.00 36.25 3.32
293 294 3.197766 AGCCGGAGAATCATAACACTCAA 59.802 43.478 5.05 0.00 36.25 3.02
377 391 3.571571 GGCCATTCGGTTTCTACAAAAC 58.428 45.455 0.00 0.00 33.28 2.43
386 400 4.374399 GGTTTCTACAAAACGGACTCTCA 58.626 43.478 0.00 0.00 0.00 3.27
462 476 1.388547 AACAAGGCTTGCTCGACAAA 58.611 45.000 26.45 0.00 37.96 2.83
501 515 9.247126 TCAAATGTCACACAATTCTAATTTGTG 57.753 29.630 13.38 13.38 37.96 3.33
515 529 6.354130 TCTAATTTGTGAGCCACCTATTACC 58.646 40.000 3.33 0.00 32.73 2.85
576 617 7.540299 TCACCATGGGTTTTATTAATTTCGTC 58.460 34.615 18.09 0.00 31.02 4.20
597 638 4.006989 TCGGAATTGAAATTGGACACGAT 58.993 39.130 0.00 0.00 0.00 3.73
605 646 4.822350 TGAAATTGGACACGATAAACACCA 59.178 37.500 0.00 0.00 0.00 4.17
639 680 4.715527 AAAGCTACTTCGGACGTAGAAT 57.284 40.909 21.69 9.17 37.18 2.40
648 690 4.627611 TCGGACGTAGAATTTCAGTAGG 57.372 45.455 0.00 0.00 0.00 3.18
660 702 7.305474 AGAATTTCAGTAGGCGTGTTAATTTG 58.695 34.615 0.00 0.00 0.00 2.32
662 704 5.600908 TTCAGTAGGCGTGTTAATTTGTC 57.399 39.130 0.00 0.00 0.00 3.18
667 709 3.401182 AGGCGTGTTAATTTGTCGGTTA 58.599 40.909 0.00 0.00 0.00 2.85
733 1964 6.539649 TCAACTCTCAACCTTTACAAATCG 57.460 37.500 0.00 0.00 0.00 3.34
755 1986 3.550842 GGGAACTGCACAAACTTGTCATC 60.551 47.826 0.00 0.00 39.91 2.92
756 1987 3.316308 GGAACTGCACAAACTTGTCATCT 59.684 43.478 0.00 0.00 39.91 2.90
761 1992 2.351157 GCACAAACTTGTCATCTGAGGC 60.351 50.000 0.00 0.00 39.91 4.70
777 2008 2.560981 TGAGGCGACAGATTTCACACTA 59.439 45.455 0.00 0.00 0.00 2.74
778 2009 3.182967 GAGGCGACAGATTTCACACTAG 58.817 50.000 0.00 0.00 0.00 2.57
779 2010 2.563179 AGGCGACAGATTTCACACTAGT 59.437 45.455 0.00 0.00 0.00 2.57
781 2012 4.402793 AGGCGACAGATTTCACACTAGTAT 59.597 41.667 0.00 0.00 0.00 2.12
782 2013 5.105310 AGGCGACAGATTTCACACTAGTATT 60.105 40.000 0.00 0.00 0.00 1.89
784 2015 6.755141 GGCGACAGATTTCACACTAGTATTAA 59.245 38.462 0.00 0.00 0.00 1.40
785 2016 7.277098 GGCGACAGATTTCACACTAGTATTAAA 59.723 37.037 0.00 0.00 0.00 1.52
811 2042 2.913603 TCCTATAGTATGGGACGGGG 57.086 55.000 11.04 0.00 34.71 5.73
812 2043 1.360162 TCCTATAGTATGGGACGGGGG 59.640 57.143 11.04 0.00 34.71 5.40
876 2342 0.603065 GGTTGGTCAAAGGACATGGC 59.397 55.000 0.00 0.00 46.17 4.40
905 2371 1.191535 GCCCATTTAAACCCCTCACC 58.808 55.000 0.00 0.00 0.00 4.02
983 2458 0.179045 CTCGAATCCCCTCGCCATTT 60.179 55.000 0.00 0.00 38.73 2.32
1097 2592 1.021390 GCGCTACTCACCAATGCTGT 61.021 55.000 0.00 0.00 0.00 4.40
1158 2653 2.393768 CCTGCTGTCGCGCATTCTT 61.394 57.895 8.75 0.00 39.52 2.52
1161 2656 2.787249 CTGTCGCGCATTCTTGGG 59.213 61.111 8.75 0.00 38.75 4.12
1364 2870 6.995686 TGAGTGATTAAACTGGCTGAGTTAAA 59.004 34.615 0.00 0.00 44.68 1.52
1377 2883 4.109766 CTGAGTTAAATGTGATCGGCGTA 58.890 43.478 6.85 0.00 0.00 4.42
1380 2886 3.247648 AGTTAAATGTGATCGGCGTATGC 59.752 43.478 6.85 0.00 41.71 3.14
1417 2928 2.312348 CGTGGCGTGGTTAATTGTTTC 58.688 47.619 0.00 0.00 0.00 2.78
1605 3116 1.285950 CGCTCCGACTTGTCTGACA 59.714 57.895 6.36 6.36 0.00 3.58
1619 3130 2.202932 GACAGCGGCCATGTCGAT 60.203 61.111 19.23 0.65 37.88 3.59
1707 3218 3.047280 GTGGTTCACGCGATGCCA 61.047 61.111 15.93 12.74 0.00 4.92
1813 3324 3.444805 GCAGCTCGACTCGGACCT 61.445 66.667 0.00 0.00 0.00 3.85
1817 3328 2.436292 CTCGACTCGGACCTCGGT 60.436 66.667 0.00 0.00 39.77 4.69
1843 3354 0.460987 GAGGAGGAATGCGTGACCAG 60.461 60.000 5.42 0.00 0.00 4.00
1844 3355 1.194781 AGGAGGAATGCGTGACCAGT 61.195 55.000 5.42 0.00 0.00 4.00
1845 3356 1.021390 GGAGGAATGCGTGACCAGTG 61.021 60.000 5.42 0.00 0.00 3.66
1846 3357 1.003355 AGGAATGCGTGACCAGTGG 60.003 57.895 7.91 7.91 0.00 4.00
1847 3358 2.690778 GGAATGCGTGACCAGTGGC 61.691 63.158 9.78 2.56 0.00 5.01
1848 3359 3.027170 GAATGCGTGACCAGTGGCG 62.027 63.158 9.78 6.16 0.00 5.69
1864 3375 2.900273 CGGAGCCAGGGAATTCGA 59.100 61.111 0.00 0.00 0.00 3.71
1865 3376 1.220749 CGGAGCCAGGGAATTCGAA 59.779 57.895 0.00 0.00 0.00 3.71
1866 3377 0.179045 CGGAGCCAGGGAATTCGAAT 60.179 55.000 4.39 4.39 0.00 3.34
1867 3378 1.312815 GGAGCCAGGGAATTCGAATG 58.687 55.000 12.25 0.00 0.00 2.67
1868 3379 1.134098 GGAGCCAGGGAATTCGAATGA 60.134 52.381 12.25 0.00 0.00 2.57
1869 3380 2.216898 GAGCCAGGGAATTCGAATGAG 58.783 52.381 12.25 0.36 0.00 2.90
1870 3381 1.133976 AGCCAGGGAATTCGAATGAGG 60.134 52.381 12.25 10.27 0.00 3.86
1871 3382 1.134098 GCCAGGGAATTCGAATGAGGA 60.134 52.381 12.25 0.00 0.00 3.71
1872 3383 2.843701 CCAGGGAATTCGAATGAGGAG 58.156 52.381 12.25 2.50 0.00 3.69
1873 3384 2.486191 CCAGGGAATTCGAATGAGGAGG 60.486 54.545 12.25 7.99 0.00 4.30
1874 3385 1.771255 AGGGAATTCGAATGAGGAGGG 59.229 52.381 12.25 0.00 0.00 4.30
1875 3386 1.598882 GGAATTCGAATGAGGAGGGC 58.401 55.000 12.25 0.00 0.00 5.19
1876 3387 1.598882 GAATTCGAATGAGGAGGGCC 58.401 55.000 12.25 0.00 0.00 5.80
1877 3388 0.918983 AATTCGAATGAGGAGGGCCA 59.081 50.000 12.25 0.00 36.29 5.36
1878 3389 0.918983 ATTCGAATGAGGAGGGCCAA 59.081 50.000 10.50 0.00 36.29 4.52
1879 3390 0.253044 TTCGAATGAGGAGGGCCAAG 59.747 55.000 6.18 0.00 36.29 3.61
1880 3391 0.909610 TCGAATGAGGAGGGCCAAGT 60.910 55.000 6.18 0.00 36.29 3.16
1881 3392 0.830648 CGAATGAGGAGGGCCAAGTA 59.169 55.000 6.18 0.00 36.29 2.24
1882 3393 1.417890 CGAATGAGGAGGGCCAAGTAT 59.582 52.381 6.18 0.00 36.29 2.12
1883 3394 2.158755 CGAATGAGGAGGGCCAAGTATT 60.159 50.000 6.18 0.00 36.29 1.89
1885 3396 1.668826 TGAGGAGGGCCAAGTATTGT 58.331 50.000 6.18 0.00 46.99 2.71
1886 3397 1.992557 TGAGGAGGGCCAAGTATTGTT 59.007 47.619 6.18 0.00 46.99 2.83
1887 3398 3.186283 TGAGGAGGGCCAAGTATTGTTA 58.814 45.455 6.18 0.00 46.99 2.41
1888 3399 3.785887 TGAGGAGGGCCAAGTATTGTTAT 59.214 43.478 6.18 0.00 46.99 1.89
1889 3400 4.137543 GAGGAGGGCCAAGTATTGTTATG 58.862 47.826 6.18 0.00 46.99 1.90
1890 3401 3.527665 AGGAGGGCCAAGTATTGTTATGT 59.472 43.478 6.18 0.00 46.99 2.29
1891 3402 3.883489 GGAGGGCCAAGTATTGTTATGTC 59.117 47.826 6.18 0.00 46.99 3.06
1892 3403 4.385310 GGAGGGCCAAGTATTGTTATGTCT 60.385 45.833 6.18 0.00 46.99 3.41
1893 3404 5.193099 AGGGCCAAGTATTGTTATGTCTT 57.807 39.130 6.18 0.00 46.99 3.01
1894 3405 4.949856 AGGGCCAAGTATTGTTATGTCTTG 59.050 41.667 6.18 0.00 46.99 3.02
1895 3406 4.705023 GGGCCAAGTATTGTTATGTCTTGT 59.295 41.667 4.39 0.00 46.99 3.16
1896 3407 5.185056 GGGCCAAGTATTGTTATGTCTTGTT 59.815 40.000 4.39 0.00 46.99 2.83
1897 3408 6.376018 GGGCCAAGTATTGTTATGTCTTGTTA 59.624 38.462 4.39 0.00 46.99 2.41
1898 3409 7.415206 GGGCCAAGTATTGTTATGTCTTGTTAG 60.415 40.741 4.39 0.00 46.99 2.34
1899 3410 7.335924 GGCCAAGTATTGTTATGTCTTGTTAGA 59.664 37.037 0.00 0.00 46.99 2.10
1900 3411 8.391106 GCCAAGTATTGTTATGTCTTGTTAGAG 58.609 37.037 0.00 0.00 46.99 2.43
1901 3412 9.653287 CCAAGTATTGTTATGTCTTGTTAGAGA 57.347 33.333 0.00 0.00 46.99 3.10
1903 3414 9.877178 AAGTATTGTTATGTCTTGTTAGAGAGG 57.123 33.333 0.00 0.00 0.00 3.69
1904 3415 8.478877 AGTATTGTTATGTCTTGTTAGAGAGGG 58.521 37.037 0.00 0.00 0.00 4.30
1905 3416 5.086104 TGTTATGTCTTGTTAGAGAGGGC 57.914 43.478 0.00 0.00 0.00 5.19
1906 3417 4.081087 TGTTATGTCTTGTTAGAGAGGGCC 60.081 45.833 0.00 0.00 0.00 5.80
1907 3418 2.024176 TGTCTTGTTAGAGAGGGCCA 57.976 50.000 6.18 0.00 0.00 5.36
1908 3419 1.902508 TGTCTTGTTAGAGAGGGCCAG 59.097 52.381 6.18 0.00 0.00 4.85
1909 3420 1.903183 GTCTTGTTAGAGAGGGCCAGT 59.097 52.381 6.18 0.00 0.00 4.00
1910 3421 2.303311 GTCTTGTTAGAGAGGGCCAGTT 59.697 50.000 6.18 0.00 0.00 3.16
1911 3422 2.567615 TCTTGTTAGAGAGGGCCAGTTC 59.432 50.000 6.18 0.00 0.00 3.01
1912 3423 2.024176 TGTTAGAGAGGGCCAGTTCA 57.976 50.000 6.18 0.00 0.00 3.18
1913 3424 2.551270 TGTTAGAGAGGGCCAGTTCAT 58.449 47.619 6.18 0.00 0.00 2.57
1914 3425 3.719871 TGTTAGAGAGGGCCAGTTCATA 58.280 45.455 6.18 0.00 0.00 2.15
1915 3426 4.101114 TGTTAGAGAGGGCCAGTTCATAA 58.899 43.478 6.18 0.46 0.00 1.90
1916 3427 4.534500 TGTTAGAGAGGGCCAGTTCATAAA 59.466 41.667 6.18 0.00 0.00 1.40
1917 3428 5.013704 TGTTAGAGAGGGCCAGTTCATAAAA 59.986 40.000 6.18 0.00 0.00 1.52
1918 3429 4.657814 AGAGAGGGCCAGTTCATAAAAA 57.342 40.909 6.18 0.00 0.00 1.94
1919 3430 5.198602 AGAGAGGGCCAGTTCATAAAAAT 57.801 39.130 6.18 0.00 0.00 1.82
1920 3431 6.327386 AGAGAGGGCCAGTTCATAAAAATA 57.673 37.500 6.18 0.00 0.00 1.40
1921 3432 6.122964 AGAGAGGGCCAGTTCATAAAAATAC 58.877 40.000 6.18 0.00 0.00 1.89
1922 3433 5.826643 AGAGGGCCAGTTCATAAAAATACA 58.173 37.500 6.18 0.00 0.00 2.29
1923 3434 6.435164 AGAGGGCCAGTTCATAAAAATACAT 58.565 36.000 6.18 0.00 0.00 2.29
1924 3435 6.547510 AGAGGGCCAGTTCATAAAAATACATC 59.452 38.462 6.18 0.00 0.00 3.06
1925 3436 6.194235 AGGGCCAGTTCATAAAAATACATCA 58.806 36.000 6.18 0.00 0.00 3.07
1926 3437 6.840705 AGGGCCAGTTCATAAAAATACATCAT 59.159 34.615 6.18 0.00 0.00 2.45
1927 3438 7.345392 AGGGCCAGTTCATAAAAATACATCATT 59.655 33.333 6.18 0.00 0.00 2.57
1928 3439 7.986889 GGGCCAGTTCATAAAAATACATCATTT 59.013 33.333 4.39 0.00 38.54 2.32
1929 3440 9.382275 GGCCAGTTCATAAAAATACATCATTTT 57.618 29.630 0.00 0.00 46.56 1.82
1942 3453 8.830201 AATACATCATTTTAGCAGCAAAAACA 57.170 26.923 0.00 0.00 31.54 2.83
1943 3454 9.439500 AATACATCATTTTAGCAGCAAAAACAT 57.561 25.926 0.00 0.00 31.54 2.71
1944 3455 7.355332 ACATCATTTTAGCAGCAAAAACATC 57.645 32.000 0.00 0.00 31.54 3.06
1945 3456 6.930164 ACATCATTTTAGCAGCAAAAACATCA 59.070 30.769 0.00 0.00 31.54 3.07
1946 3457 7.441760 ACATCATTTTAGCAGCAAAAACATCAA 59.558 29.630 0.00 0.00 31.54 2.57
1947 3458 7.783090 TCATTTTAGCAGCAAAAACATCAAA 57.217 28.000 0.00 0.00 31.54 2.69
1948 3459 7.853524 TCATTTTAGCAGCAAAAACATCAAAG 58.146 30.769 0.00 0.00 31.54 2.77
1949 3460 7.495279 TCATTTTAGCAGCAAAAACATCAAAGT 59.505 29.630 0.00 0.00 31.54 2.66
1950 3461 7.608308 TTTTAGCAGCAAAAACATCAAAGTT 57.392 28.000 0.00 0.00 0.00 2.66
1951 3462 7.608308 TTTAGCAGCAAAAACATCAAAGTTT 57.392 28.000 0.00 0.00 43.13 2.66
1952 3463 8.709386 TTTAGCAGCAAAAACATCAAAGTTTA 57.291 26.923 0.00 0.00 40.60 2.01
1953 3464 6.588348 AGCAGCAAAAACATCAAAGTTTAC 57.412 33.333 0.00 0.00 40.60 2.01
1954 3465 6.105333 AGCAGCAAAAACATCAAAGTTTACA 58.895 32.000 0.00 0.00 40.60 2.41
1955 3466 6.035975 AGCAGCAAAAACATCAAAGTTTACAC 59.964 34.615 0.00 0.00 40.60 2.90
1956 3467 6.035975 GCAGCAAAAACATCAAAGTTTACACT 59.964 34.615 0.00 0.00 40.60 3.55
1957 3468 7.221838 GCAGCAAAAACATCAAAGTTTACACTA 59.778 33.333 0.00 0.00 40.60 2.74
1958 3469 9.081997 CAGCAAAAACATCAAAGTTTACACTAA 57.918 29.630 0.00 0.00 40.60 2.24
1959 3470 9.816354 AGCAAAAACATCAAAGTTTACACTAAT 57.184 25.926 0.00 0.00 40.60 1.73
1985 3496 8.057536 ACTAGACTCAAATCAGTAGTGTTAGG 57.942 38.462 0.00 0.00 0.00 2.69
1986 3497 6.287589 AGACTCAAATCAGTAGTGTTAGGG 57.712 41.667 0.00 0.00 0.00 3.53
1987 3498 5.187967 AGACTCAAATCAGTAGTGTTAGGGG 59.812 44.000 0.00 0.00 0.00 4.79
1988 3499 4.225267 ACTCAAATCAGTAGTGTTAGGGGG 59.775 45.833 0.00 0.00 0.00 5.40
2028 3539 4.087892 CCCCTGTCTCCGCCACTG 62.088 72.222 0.00 0.00 0.00 3.66
2029 3540 3.314331 CCCTGTCTCCGCCACTGT 61.314 66.667 0.00 0.00 0.00 3.55
2030 3541 2.047844 CCTGTCTCCGCCACTGTG 60.048 66.667 0.00 0.00 0.00 3.66
2031 3542 2.740055 CTGTCTCCGCCACTGTGC 60.740 66.667 1.29 0.00 0.00 4.57
2144 3936 4.574599 GGTTCTGTGCTGAACTGAATTT 57.425 40.909 10.78 0.00 45.18 1.82
2273 4079 2.466846 GAACACGAAGACAACGAGGAA 58.533 47.619 0.00 0.00 34.70 3.36
2287 4096 0.759060 GAGGAAGAGGAGGAGGGAGC 60.759 65.000 0.00 0.00 0.00 4.70
2309 4118 1.340211 ACTGACGAGGAGGACGAAGAT 60.340 52.381 0.00 0.00 34.70 2.40
2381 4190 4.427661 GAGCTCCTGCAGTCGCGT 62.428 66.667 13.81 4.80 42.97 6.01
2418 4227 1.216710 GAGCTGGAGACGGAACTGG 59.783 63.158 0.00 0.00 39.98 4.00
2456 4265 4.735132 CGGGACAAGGAGCGCGAA 62.735 66.667 12.10 0.00 42.14 4.70
2539 4348 3.993920 GGTAGAACCGTAGAACCAAACA 58.006 45.455 0.00 0.00 0.00 2.83
2540 4349 4.379652 GGTAGAACCGTAGAACCAAACAA 58.620 43.478 0.00 0.00 0.00 2.83
2541 4350 4.212004 GGTAGAACCGTAGAACCAAACAAC 59.788 45.833 0.00 0.00 0.00 3.32
2542 4351 3.208594 AGAACCGTAGAACCAAACAACC 58.791 45.455 0.00 0.00 0.00 3.77
2543 4352 1.585297 ACCGTAGAACCAAACAACCG 58.415 50.000 0.00 0.00 0.00 4.44
2544 4353 1.138661 ACCGTAGAACCAAACAACCGA 59.861 47.619 0.00 0.00 0.00 4.69
2545 4354 1.528161 CCGTAGAACCAAACAACCGAC 59.472 52.381 0.00 0.00 0.00 4.79
2546 4355 1.190763 CGTAGAACCAAACAACCGACG 59.809 52.381 0.00 0.00 0.00 5.12
2547 4356 2.204237 GTAGAACCAAACAACCGACGT 58.796 47.619 0.00 0.00 0.00 4.34
2548 4357 1.292992 AGAACCAAACAACCGACGTC 58.707 50.000 5.18 5.18 0.00 4.34
2549 4358 0.305617 GAACCAAACAACCGACGTCC 59.694 55.000 10.58 0.00 0.00 4.79
2550 4359 1.430707 AACCAAACAACCGACGTCCG 61.431 55.000 10.58 6.12 38.18 4.79
2551 4360 1.884004 CCAAACAACCGACGTCCGT 60.884 57.895 10.58 6.88 36.31 4.69
2552 4361 1.561250 CAAACAACCGACGTCCGTC 59.439 57.895 10.58 9.69 41.40 4.79
2560 4369 3.545911 GACGTCCGTCGCAACAAT 58.454 55.556 3.51 0.00 44.19 2.71
2561 4370 1.414897 GACGTCCGTCGCAACAATC 59.585 57.895 3.51 0.00 44.19 2.67
2562 4371 1.279527 GACGTCCGTCGCAACAATCA 61.280 55.000 3.51 0.00 44.19 2.57
2563 4372 0.669318 ACGTCCGTCGCAACAATCAT 60.669 50.000 0.00 0.00 44.19 2.45
2564 4373 0.025001 CGTCCGTCGCAACAATCATC 59.975 55.000 0.00 0.00 0.00 2.92
2565 4374 0.373716 GTCCGTCGCAACAATCATCC 59.626 55.000 0.00 0.00 0.00 3.51
2566 4375 0.249120 TCCGTCGCAACAATCATCCT 59.751 50.000 0.00 0.00 0.00 3.24
2567 4376 0.374758 CCGTCGCAACAATCATCCTG 59.625 55.000 0.00 0.00 0.00 3.86
2568 4377 0.374758 CGTCGCAACAATCATCCTGG 59.625 55.000 0.00 0.00 0.00 4.45
2569 4378 0.099436 GTCGCAACAATCATCCTGGC 59.901 55.000 0.00 0.00 0.00 4.85
2570 4379 0.322366 TCGCAACAATCATCCTGGCA 60.322 50.000 0.00 0.00 0.00 4.92
2571 4380 0.742505 CGCAACAATCATCCTGGCAT 59.257 50.000 0.00 0.00 0.00 4.40
2572 4381 1.535226 CGCAACAATCATCCTGGCATG 60.535 52.381 0.00 0.00 0.00 4.06
2573 4382 1.752498 GCAACAATCATCCTGGCATGA 59.248 47.619 0.00 10.03 37.20 3.07
2574 4383 2.480759 GCAACAATCATCCTGGCATGAC 60.481 50.000 0.00 0.00 35.57 3.06
2575 4384 2.062971 ACAATCATCCTGGCATGACC 57.937 50.000 0.00 0.00 35.57 4.02
2576 4385 1.325355 CAATCATCCTGGCATGACCC 58.675 55.000 0.00 0.00 35.57 4.46
2577 4386 1.133575 CAATCATCCTGGCATGACCCT 60.134 52.381 0.00 0.00 35.57 4.34
2578 4387 1.229131 ATCATCCTGGCATGACCCTT 58.771 50.000 0.00 0.00 35.57 3.95
2579 4388 1.002069 TCATCCTGGCATGACCCTTT 58.998 50.000 0.00 0.00 37.83 3.11
2580 4389 1.358787 TCATCCTGGCATGACCCTTTT 59.641 47.619 0.00 0.00 37.83 2.27
2581 4390 2.181975 CATCCTGGCATGACCCTTTTT 58.818 47.619 0.00 0.00 37.83 1.94
2609 4418 5.494632 GGAACAACCGTATTCCATTAAGG 57.505 43.478 8.87 0.00 43.40 2.69
2610 4419 4.201980 GGAACAACCGTATTCCATTAAGGC 60.202 45.833 8.87 0.00 43.40 4.35
2611 4420 3.958018 ACAACCGTATTCCATTAAGGCA 58.042 40.909 0.00 0.00 37.29 4.75
2612 4421 3.692593 ACAACCGTATTCCATTAAGGCAC 59.307 43.478 0.00 0.00 37.29 5.01
2613 4422 2.557317 ACCGTATTCCATTAAGGCACG 58.443 47.619 0.00 0.00 36.88 5.34
2614 4423 2.168936 ACCGTATTCCATTAAGGCACGA 59.831 45.455 0.00 0.00 38.35 4.35
2615 4424 2.542595 CCGTATTCCATTAAGGCACGAC 59.457 50.000 0.00 0.00 38.35 4.34
2616 4425 3.454375 CGTATTCCATTAAGGCACGACT 58.546 45.455 0.00 0.00 38.35 4.18
2617 4426 4.500205 CCGTATTCCATTAAGGCACGACTA 60.500 45.833 0.00 0.00 38.35 2.59
2618 4427 5.045215 CGTATTCCATTAAGGCACGACTAA 58.955 41.667 0.00 0.00 38.35 2.24
2619 4428 5.521010 CGTATTCCATTAAGGCACGACTAAA 59.479 40.000 0.00 0.00 38.35 1.85
2620 4429 6.202188 CGTATTCCATTAAGGCACGACTAAAT 59.798 38.462 0.00 0.00 38.35 1.40
2621 4430 6.619801 ATTCCATTAAGGCACGACTAAATC 57.380 37.500 0.00 0.00 37.29 2.17
2622 4431 5.092554 TCCATTAAGGCACGACTAAATCA 57.907 39.130 0.00 0.00 37.29 2.57
2623 4432 5.680619 TCCATTAAGGCACGACTAAATCAT 58.319 37.500 0.00 0.00 37.29 2.45
2624 4433 5.758296 TCCATTAAGGCACGACTAAATCATC 59.242 40.000 0.00 0.00 37.29 2.92
2625 4434 5.333339 CCATTAAGGCACGACTAAATCATCG 60.333 44.000 0.00 0.00 43.97 3.84
2626 4435 2.225068 AGGCACGACTAAATCATCGG 57.775 50.000 0.00 0.00 42.67 4.18
2627 4436 1.480954 AGGCACGACTAAATCATCGGT 59.519 47.619 0.00 0.00 42.67 4.69
2628 4437 2.093658 AGGCACGACTAAATCATCGGTT 60.094 45.455 0.00 0.00 42.67 4.44
2629 4438 3.131577 AGGCACGACTAAATCATCGGTTA 59.868 43.478 0.00 0.00 42.67 2.85
2630 4439 3.244579 GGCACGACTAAATCATCGGTTAC 59.755 47.826 0.00 0.00 42.67 2.50
2631 4440 3.861113 GCACGACTAAATCATCGGTTACA 59.139 43.478 0.00 0.00 42.67 2.41
2632 4441 4.026804 GCACGACTAAATCATCGGTTACAG 60.027 45.833 0.00 0.00 42.67 2.74
2633 4442 4.026804 CACGACTAAATCATCGGTTACAGC 60.027 45.833 0.00 0.00 42.67 4.40
2634 4443 4.109766 CGACTAAATCATCGGTTACAGCA 58.890 43.478 0.00 0.00 34.67 4.41
2635 4444 4.026804 CGACTAAATCATCGGTTACAGCAC 60.027 45.833 0.00 0.00 34.67 4.40
2636 4445 4.827692 ACTAAATCATCGGTTACAGCACA 58.172 39.130 0.00 0.00 0.00 4.57
2637 4446 5.242434 ACTAAATCATCGGTTACAGCACAA 58.758 37.500 0.00 0.00 0.00 3.33
2638 4447 4.685169 AAATCATCGGTTACAGCACAAG 57.315 40.909 0.00 0.00 0.00 3.16
2639 4448 2.831685 TCATCGGTTACAGCACAAGT 57.168 45.000 0.00 0.00 0.00 3.16
2640 4449 3.120321 TCATCGGTTACAGCACAAGTT 57.880 42.857 0.00 0.00 0.00 2.66
2641 4450 4.260139 TCATCGGTTACAGCACAAGTTA 57.740 40.909 0.00 0.00 0.00 2.24
2642 4451 3.991773 TCATCGGTTACAGCACAAGTTAC 59.008 43.478 0.00 0.00 0.00 2.50
2643 4452 3.455990 TCGGTTACAGCACAAGTTACA 57.544 42.857 0.00 0.00 0.00 2.41
2644 4453 3.997762 TCGGTTACAGCACAAGTTACAT 58.002 40.909 0.00 0.00 0.00 2.29
2645 4454 3.991773 TCGGTTACAGCACAAGTTACATC 59.008 43.478 0.00 0.00 0.00 3.06
2646 4455 3.743911 CGGTTACAGCACAAGTTACATCA 59.256 43.478 0.00 0.00 0.00 3.07
2647 4456 4.391830 CGGTTACAGCACAAGTTACATCAT 59.608 41.667 0.00 0.00 0.00 2.45
2648 4457 5.445939 CGGTTACAGCACAAGTTACATCATC 60.446 44.000 0.00 0.00 0.00 2.92
2649 4458 5.411361 GGTTACAGCACAAGTTACATCATCA 59.589 40.000 0.00 0.00 0.00 3.07
2650 4459 6.402550 GGTTACAGCACAAGTTACATCATCAG 60.403 42.308 0.00 0.00 0.00 2.90
2651 4460 4.898320 ACAGCACAAGTTACATCATCAGA 58.102 39.130 0.00 0.00 0.00 3.27
2652 4461 5.308014 ACAGCACAAGTTACATCATCAGAA 58.692 37.500 0.00 0.00 0.00 3.02
2653 4462 5.942236 ACAGCACAAGTTACATCATCAGAAT 59.058 36.000 0.00 0.00 0.00 2.40
2654 4463 7.105588 ACAGCACAAGTTACATCATCAGAATA 58.894 34.615 0.00 0.00 0.00 1.75
2655 4464 7.279536 ACAGCACAAGTTACATCATCAGAATAG 59.720 37.037 0.00 0.00 0.00 1.73
2656 4465 7.279536 CAGCACAAGTTACATCATCAGAATAGT 59.720 37.037 0.00 0.00 0.00 2.12
2657 4466 7.826252 AGCACAAGTTACATCATCAGAATAGTT 59.174 33.333 0.00 0.00 0.00 2.24
2658 4467 9.098355 GCACAAGTTACATCATCAGAATAGTTA 57.902 33.333 0.00 0.00 0.00 2.24
2660 4469 9.823647 ACAAGTTACATCATCAGAATAGTTAGG 57.176 33.333 0.00 0.00 0.00 2.69
2661 4470 9.265901 CAAGTTACATCATCAGAATAGTTAGGG 57.734 37.037 0.00 0.00 0.00 3.53
2662 4471 8.783660 AGTTACATCATCAGAATAGTTAGGGA 57.216 34.615 0.00 0.00 0.00 4.20
2663 4472 9.213777 AGTTACATCATCAGAATAGTTAGGGAA 57.786 33.333 0.00 0.00 0.00 3.97
2664 4473 9.262358 GTTACATCATCAGAATAGTTAGGGAAC 57.738 37.037 0.00 0.00 35.64 3.62
2678 4487 2.836944 GGAACCACTGGTTAGACGC 58.163 57.895 13.72 0.93 46.95 5.19
2679 4488 0.320697 GGAACCACTGGTTAGACGCT 59.679 55.000 13.72 0.00 46.95 5.07
2680 4489 1.672145 GGAACCACTGGTTAGACGCTC 60.672 57.143 13.72 0.00 46.95 5.03
2681 4490 0.320697 AACCACTGGTTAGACGCTCC 59.679 55.000 12.06 0.00 44.94 4.70
2682 4491 0.830444 ACCACTGGTTAGACGCTCCA 60.830 55.000 0.00 0.00 27.29 3.86
2683 4492 4.242622 AACCACTGGTTAGACGCTCCAG 62.243 54.545 12.06 8.61 44.94 3.86
2684 4493 4.504132 CTGGTTAGACGCTCCAGC 57.496 61.111 0.00 0.00 41.46 4.85
2685 4494 1.591703 CTGGTTAGACGCTCCAGCA 59.408 57.895 0.00 0.00 41.46 4.41
2686 4495 0.737715 CTGGTTAGACGCTCCAGCAC 60.738 60.000 0.00 0.00 41.46 4.40
2687 4496 1.448013 GGTTAGACGCTCCAGCACC 60.448 63.158 0.00 0.00 42.21 5.01
2688 4497 1.592223 GTTAGACGCTCCAGCACCT 59.408 57.895 0.00 0.00 42.21 4.00
2689 4498 0.815734 GTTAGACGCTCCAGCACCTA 59.184 55.000 0.00 0.00 42.21 3.08
2690 4499 1.203994 GTTAGACGCTCCAGCACCTAA 59.796 52.381 0.00 2.99 42.21 2.69
2691 4500 1.776662 TAGACGCTCCAGCACCTAAT 58.223 50.000 0.00 0.00 42.21 1.73
2692 4501 0.461961 AGACGCTCCAGCACCTAATC 59.538 55.000 0.00 0.00 42.21 1.75
2693 4502 0.872021 GACGCTCCAGCACCTAATCG 60.872 60.000 0.00 0.00 42.21 3.34
2694 4503 1.141881 CGCTCCAGCACCTAATCGT 59.858 57.895 0.00 0.00 42.21 3.73
2695 4504 1.148157 CGCTCCAGCACCTAATCGTG 61.148 60.000 0.00 0.00 42.21 4.35
2705 4514 2.287915 CACCTAATCGTGCACCAATAGC 59.712 50.000 12.15 0.00 0.00 2.97
2706 4515 2.093181 ACCTAATCGTGCACCAATAGCA 60.093 45.455 12.15 0.00 40.19 3.49
2707 4516 2.545526 CCTAATCGTGCACCAATAGCAG 59.454 50.000 12.15 4.17 43.63 4.24
2708 4517 0.734889 AATCGTGCACCAATAGCAGC 59.265 50.000 12.15 0.00 43.63 5.25
2709 4518 1.097547 ATCGTGCACCAATAGCAGCC 61.098 55.000 12.15 0.00 43.63 4.85
2710 4519 2.039974 CGTGCACCAATAGCAGCCA 61.040 57.895 12.15 0.00 43.63 4.75
2711 4520 1.585267 CGTGCACCAATAGCAGCCAA 61.585 55.000 12.15 0.00 43.63 4.52
2712 4521 0.109132 GTGCACCAATAGCAGCCAAC 60.109 55.000 5.22 0.00 43.63 3.77
2713 4522 0.539207 TGCACCAATAGCAGCCAACA 60.539 50.000 0.00 0.00 37.02 3.33
2714 4523 0.109132 GCACCAATAGCAGCCAACAC 60.109 55.000 0.00 0.00 0.00 3.32
2715 4524 1.246649 CACCAATAGCAGCCAACACA 58.753 50.000 0.00 0.00 0.00 3.72
2716 4525 1.820519 CACCAATAGCAGCCAACACAT 59.179 47.619 0.00 0.00 0.00 3.21
2717 4526 3.016031 CACCAATAGCAGCCAACACATA 58.984 45.455 0.00 0.00 0.00 2.29
2718 4527 3.016736 ACCAATAGCAGCCAACACATAC 58.983 45.455 0.00 0.00 0.00 2.39
2719 4528 2.032054 CCAATAGCAGCCAACACATACG 59.968 50.000 0.00 0.00 0.00 3.06
2720 4529 1.299541 ATAGCAGCCAACACATACGC 58.700 50.000 0.00 0.00 0.00 4.42
2721 4530 0.249120 TAGCAGCCAACACATACGCT 59.751 50.000 0.00 0.00 0.00 5.07
2723 4532 1.796151 CAGCCAACACATACGCTGG 59.204 57.895 0.00 0.00 43.96 4.85
2724 4533 2.485122 GCCAACACATACGCTGGC 59.515 61.111 0.00 0.00 46.95 4.85
2725 4534 4.301505 CCAACACATACGCTGGCT 57.698 55.556 0.00 0.00 0.00 4.75
2726 4535 2.555123 CCAACACATACGCTGGCTT 58.445 52.632 0.00 0.00 0.00 4.35
2727 4536 1.732941 CCAACACATACGCTGGCTTA 58.267 50.000 0.00 0.00 0.00 3.09
2728 4537 2.288666 CCAACACATACGCTGGCTTAT 58.711 47.619 0.00 0.00 0.00 1.73
2729 4538 2.682856 CCAACACATACGCTGGCTTATT 59.317 45.455 0.00 0.00 0.00 1.40
2730 4539 3.874543 CCAACACATACGCTGGCTTATTA 59.125 43.478 0.00 0.00 0.00 0.98
2731 4540 4.260620 CCAACACATACGCTGGCTTATTAC 60.261 45.833 0.00 0.00 0.00 1.89
2732 4541 4.131649 ACACATACGCTGGCTTATTACA 57.868 40.909 0.00 0.00 0.00 2.41
2733 4542 4.703897 ACACATACGCTGGCTTATTACAT 58.296 39.130 0.00 0.00 0.00 2.29
2734 4543 5.123227 ACACATACGCTGGCTTATTACATT 58.877 37.500 0.00 0.00 0.00 2.71
2735 4544 5.236478 ACACATACGCTGGCTTATTACATTC 59.764 40.000 0.00 0.00 0.00 2.67
2736 4545 5.466728 CACATACGCTGGCTTATTACATTCT 59.533 40.000 0.00 0.00 0.00 2.40
2737 4546 5.696724 ACATACGCTGGCTTATTACATTCTC 59.303 40.000 0.00 0.00 0.00 2.87
2738 4547 4.137116 ACGCTGGCTTATTACATTCTCA 57.863 40.909 0.00 0.00 0.00 3.27
2739 4548 4.708177 ACGCTGGCTTATTACATTCTCAT 58.292 39.130 0.00 0.00 0.00 2.90
2740 4549 4.512944 ACGCTGGCTTATTACATTCTCATG 59.487 41.667 0.00 0.00 36.34 3.07
2741 4550 4.083643 CGCTGGCTTATTACATTCTCATGG 60.084 45.833 0.00 0.00 34.27 3.66
2742 4551 5.065914 GCTGGCTTATTACATTCTCATGGA 58.934 41.667 0.00 0.00 34.27 3.41
2743 4552 5.532406 GCTGGCTTATTACATTCTCATGGAA 59.468 40.000 0.00 0.00 37.65 3.53
2744 4553 6.208204 GCTGGCTTATTACATTCTCATGGAAT 59.792 38.462 0.00 0.00 44.91 3.01
2745 4554 7.391554 GCTGGCTTATTACATTCTCATGGAATA 59.608 37.037 8.52 0.00 41.58 1.75
2746 4555 9.458727 CTGGCTTATTACATTCTCATGGAATAT 57.541 33.333 8.52 2.21 43.19 1.28
2747 4556 9.234827 TGGCTTATTACATTCTCATGGAATATG 57.765 33.333 8.52 5.18 43.19 1.78
2748 4557 9.453572 GGCTTATTACATTCTCATGGAATATGA 57.546 33.333 13.49 0.00 43.19 2.15
2761 4570 9.531942 CTCATGGAATATGAACTATATCAGAGC 57.468 37.037 0.00 0.00 30.65 4.09
2762 4571 8.481314 TCATGGAATATGAACTATATCAGAGCC 58.519 37.037 0.00 0.00 30.65 4.70
2763 4572 8.484575 CATGGAATATGAACTATATCAGAGCCT 58.515 37.037 0.00 0.00 30.65 4.58
2764 4573 7.845037 TGGAATATGAACTATATCAGAGCCTG 58.155 38.462 0.00 0.00 30.65 4.85
2765 4574 7.675619 TGGAATATGAACTATATCAGAGCCTGA 59.324 37.037 7.26 7.26 44.99 3.86
2766 4575 8.535335 GGAATATGAACTATATCAGAGCCTGAA 58.465 37.037 8.66 0.98 44.04 3.02
2775 4584 9.499479 ACTATATCAGAGCCTGAATAAATTGTG 57.501 33.333 8.66 1.31 44.04 3.33
2776 4585 9.499479 CTATATCAGAGCCTGAATAAATTGTGT 57.501 33.333 8.66 0.00 44.04 3.72
2777 4586 5.885230 TCAGAGCCTGAATAAATTGTGTG 57.115 39.130 2.78 0.00 37.57 3.82
2778 4587 4.701651 TCAGAGCCTGAATAAATTGTGTGG 59.298 41.667 2.78 0.00 37.57 4.17
2779 4588 3.445096 AGAGCCTGAATAAATTGTGTGGC 59.555 43.478 0.00 0.00 39.40 5.01
2780 4589 3.164268 AGCCTGAATAAATTGTGTGGCA 58.836 40.909 0.00 0.00 41.33 4.92
2781 4590 3.577848 AGCCTGAATAAATTGTGTGGCAA 59.422 39.130 0.00 0.00 41.33 4.52
2782 4591 3.928375 GCCTGAATAAATTGTGTGGCAAG 59.072 43.478 0.00 0.00 40.86 4.01
2783 4592 3.928375 CCTGAATAAATTGTGTGGCAAGC 59.072 43.478 0.00 0.00 40.86 4.01
2784 4593 4.322198 CCTGAATAAATTGTGTGGCAAGCT 60.322 41.667 0.00 0.00 40.86 3.74
2785 4594 5.212532 TGAATAAATTGTGTGGCAAGCTT 57.787 34.783 0.00 0.00 40.86 3.74
2786 4595 5.229423 TGAATAAATTGTGTGGCAAGCTTC 58.771 37.500 0.00 0.00 40.86 3.86
2787 4596 4.870123 ATAAATTGTGTGGCAAGCTTCA 57.130 36.364 0.00 0.00 40.86 3.02
2788 4597 2.514205 AATTGTGTGGCAAGCTTCAC 57.486 45.000 10.56 10.56 40.86 3.18
2789 4598 0.675633 ATTGTGTGGCAAGCTTCACC 59.324 50.000 13.92 11.10 40.86 4.02
2790 4599 0.395586 TTGTGTGGCAAGCTTCACCT 60.396 50.000 13.92 0.00 33.29 4.00
2791 4600 0.395586 TGTGTGGCAAGCTTCACCTT 60.396 50.000 13.92 0.00 33.29 3.50
2792 4601 1.133945 TGTGTGGCAAGCTTCACCTTA 60.134 47.619 13.92 2.80 33.29 2.69
2793 4602 1.953686 GTGTGGCAAGCTTCACCTTAA 59.046 47.619 13.92 0.03 33.29 1.85
2794 4603 2.558359 GTGTGGCAAGCTTCACCTTAAT 59.442 45.455 13.92 0.00 33.29 1.40
2795 4604 3.005791 GTGTGGCAAGCTTCACCTTAATT 59.994 43.478 13.92 0.00 33.29 1.40
2820 4629 6.377146 TGGAGTGAAGTCTGTTTAAAAGCTTT 59.623 34.615 5.69 5.69 0.00 3.51
2821 4630 7.093945 TGGAGTGAAGTCTGTTTAAAAGCTTTT 60.094 33.333 26.50 26.50 0.00 2.27
2898 4707 4.723285 ACCCTGTATTTACTAATCCCGGTT 59.277 41.667 0.00 0.00 0.00 4.44
2928 4737 4.638304 ACCCTATATATGTTTGCGACACC 58.362 43.478 0.00 0.00 42.04 4.16
2944 4753 3.728718 CGACACCAGGAAAAACAAAATCG 59.271 43.478 0.00 0.00 0.00 3.34
2948 4757 3.702045 ACCAGGAAAAACAAAATCGTGGA 59.298 39.130 17.60 0.00 46.78 4.02
2999 4808 2.195727 TGGGCCTACATGTCATCTTCA 58.804 47.619 0.00 0.00 0.00 3.02
3059 4877 7.108847 AGAAATCCCAAACTGAATCAGACTAG 58.891 38.462 18.20 3.78 35.18 2.57
3072 4890 7.615403 TGAATCAGACTAGAAAAGCACTATGT 58.385 34.615 0.00 0.00 0.00 2.29
3078 4902 8.679100 CAGACTAGAAAAGCACTATGTAGTAGT 58.321 37.037 0.00 0.00 44.49 2.73
3079 4903 9.902684 AGACTAGAAAAGCACTATGTAGTAGTA 57.097 33.333 0.00 0.00 41.73 1.82
3080 4904 9.934190 GACTAGAAAAGCACTATGTAGTAGTAC 57.066 37.037 0.00 0.37 41.73 2.73
3102 4929 9.578439 AGTACGAACAAATAATACTAGGACAAC 57.422 33.333 0.00 0.00 0.00 3.32
3170 4997 1.728971 GGATCAGCAACGAACTGACTG 59.271 52.381 8.52 5.82 46.38 3.51
3175 5002 3.255888 TCAGCAACGAACTGACTGATACT 59.744 43.478 0.00 0.00 39.21 2.12
3176 5003 3.610242 CAGCAACGAACTGACTGATACTC 59.390 47.826 0.00 0.00 37.32 2.59
3177 5004 2.924290 GCAACGAACTGACTGATACTCC 59.076 50.000 0.00 0.00 0.00 3.85
3298 5127 2.358003 GGAGCTGCTCACGCTTGT 60.358 61.111 28.95 0.00 37.96 3.16
3349 5178 4.166011 GCCGAACATGCCAGACGC 62.166 66.667 0.00 0.00 38.31 5.19
3431 5260 2.434359 GACGCCACACAGCTACCC 60.434 66.667 0.00 0.00 0.00 3.69
3438 5267 2.683933 CACAGCTACCCGGACCCT 60.684 66.667 0.73 0.00 0.00 4.34
3449 5279 3.063084 GGACCCTGACGAGACGCT 61.063 66.667 0.00 0.00 0.00 5.07
3504 5334 3.083293 GAGACCTCGAACACCTTACTCT 58.917 50.000 0.00 0.00 0.00 3.24
3515 5345 1.757699 ACCTTACTCTTCTCCGATGCC 59.242 52.381 0.00 0.00 0.00 4.40
3516 5346 1.269309 CCTTACTCTTCTCCGATGCCG 60.269 57.143 0.00 0.00 0.00 5.69
3517 5347 0.102481 TTACTCTTCTCCGATGCCGC 59.898 55.000 0.00 0.00 0.00 6.53
3518 5348 0.752009 TACTCTTCTCCGATGCCGCT 60.752 55.000 0.00 0.00 0.00 5.52
3519 5349 1.591059 CTCTTCTCCGATGCCGCTG 60.591 63.158 0.00 0.00 0.00 5.18
3520 5350 3.267860 CTTCTCCGATGCCGCTGC 61.268 66.667 0.00 0.00 38.26 5.25
3521 5351 3.729965 CTTCTCCGATGCCGCTGCT 62.730 63.158 0.70 0.00 38.71 4.24
3522 5352 4.519437 TCTCCGATGCCGCTGCTG 62.519 66.667 0.70 0.00 38.71 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 1.425448 CCCTAAAATCCAGGGCCTAGG 59.575 57.143 5.28 10.90 46.27 3.02
11 12 2.959465 CCCTAAAATCCAGGGCCTAG 57.041 55.000 5.28 0.00 46.27 3.02
17 18 1.152756 CCCGGCCCTAAAATCCAGG 60.153 63.158 0.00 0.00 0.00 4.45
18 19 1.828224 GCCCGGCCCTAAAATCCAG 60.828 63.158 0.00 0.00 0.00 3.86
19 20 2.277404 GCCCGGCCCTAAAATCCA 59.723 61.111 0.00 0.00 0.00 3.41
20 21 2.520982 GGCCCGGCCCTAAAATCC 60.521 66.667 18.83 0.00 44.06 3.01
61 62 1.686052 GAGTAGTCCTGGCCATCTCAG 59.314 57.143 5.51 0.00 0.00 3.35
62 63 1.007118 TGAGTAGTCCTGGCCATCTCA 59.993 52.381 5.51 10.86 0.00 3.27
63 64 1.781786 TGAGTAGTCCTGGCCATCTC 58.218 55.000 5.51 8.39 0.00 2.75
64 65 2.485966 ATGAGTAGTCCTGGCCATCT 57.514 50.000 5.51 8.22 0.00 2.90
65 66 3.556004 GCTTATGAGTAGTCCTGGCCATC 60.556 52.174 5.51 0.00 0.00 3.51
66 67 2.370189 GCTTATGAGTAGTCCTGGCCAT 59.630 50.000 5.51 0.00 0.00 4.40
67 68 1.762957 GCTTATGAGTAGTCCTGGCCA 59.237 52.381 4.71 4.71 0.00 5.36
68 69 2.043227 AGCTTATGAGTAGTCCTGGCC 58.957 52.381 0.00 0.00 0.00 5.36
69 70 3.257127 CCTAGCTTATGAGTAGTCCTGGC 59.743 52.174 0.00 0.00 0.00 4.85
70 71 4.521256 GTCCTAGCTTATGAGTAGTCCTGG 59.479 50.000 0.00 0.00 0.00 4.45
71 72 4.521256 GGTCCTAGCTTATGAGTAGTCCTG 59.479 50.000 0.00 0.00 0.00 3.86
72 73 4.732065 GGTCCTAGCTTATGAGTAGTCCT 58.268 47.826 0.00 0.00 0.00 3.85
73 74 3.502979 CGGTCCTAGCTTATGAGTAGTCC 59.497 52.174 0.00 0.00 0.00 3.85
74 75 4.136051 ACGGTCCTAGCTTATGAGTAGTC 58.864 47.826 0.00 0.00 0.00 2.59
75 76 4.136051 GACGGTCCTAGCTTATGAGTAGT 58.864 47.826 0.00 0.00 0.00 2.73
76 77 4.023878 GTGACGGTCCTAGCTTATGAGTAG 60.024 50.000 5.55 0.00 0.00 2.57
77 78 3.881688 GTGACGGTCCTAGCTTATGAGTA 59.118 47.826 5.55 0.00 0.00 2.59
78 79 2.688958 GTGACGGTCCTAGCTTATGAGT 59.311 50.000 5.55 0.00 0.00 3.41
79 80 2.952978 AGTGACGGTCCTAGCTTATGAG 59.047 50.000 5.55 0.00 0.00 2.90
80 81 3.014304 AGTGACGGTCCTAGCTTATGA 57.986 47.619 5.55 0.00 0.00 2.15
81 82 3.253677 CCTAGTGACGGTCCTAGCTTATG 59.746 52.174 19.71 8.87 31.29 1.90
82 83 3.488363 CCTAGTGACGGTCCTAGCTTAT 58.512 50.000 19.71 0.00 31.29 1.73
83 84 2.928334 CCTAGTGACGGTCCTAGCTTA 58.072 52.381 19.71 0.00 31.29 3.09
84 85 1.765230 CCTAGTGACGGTCCTAGCTT 58.235 55.000 19.71 0.57 31.29 3.74
85 86 0.752376 GCCTAGTGACGGTCCTAGCT 60.752 60.000 19.71 10.56 31.29 3.32
86 87 1.035932 TGCCTAGTGACGGTCCTAGC 61.036 60.000 19.71 16.58 31.29 3.42
87 88 1.693627 ATGCCTAGTGACGGTCCTAG 58.306 55.000 18.83 18.83 0.00 3.02
88 89 1.754803 CAATGCCTAGTGACGGTCCTA 59.245 52.381 5.55 6.01 0.00 2.94
89 90 0.537188 CAATGCCTAGTGACGGTCCT 59.463 55.000 5.55 5.14 0.00 3.85
90 91 0.249398 ACAATGCCTAGTGACGGTCC 59.751 55.000 5.55 0.00 0.00 4.46
91 92 1.204941 AGACAATGCCTAGTGACGGTC 59.795 52.381 0.00 0.00 0.00 4.79
92 93 1.267121 AGACAATGCCTAGTGACGGT 58.733 50.000 0.00 0.00 0.00 4.83
93 94 3.319405 AGATAGACAATGCCTAGTGACGG 59.681 47.826 0.00 0.00 0.00 4.79
94 95 4.277174 AGAGATAGACAATGCCTAGTGACG 59.723 45.833 0.00 0.00 0.00 4.35
133 134 4.759205 AATTGCGGAGGTGCCCCC 62.759 66.667 0.00 0.00 0.00 5.40
145 146 4.100707 TCTTGCATGTTAGCTCAATTGC 57.899 40.909 0.00 0.00 34.99 3.56
149 150 2.095768 GCGTTCTTGCATGTTAGCTCAA 60.096 45.455 0.00 0.00 34.99 3.02
195 196 2.251893 GTTAACGAGACTCTGGCTTCG 58.748 52.381 0.03 0.00 0.00 3.79
203 204 2.745515 AGCCAAGGTTAACGAGACTC 57.254 50.000 0.00 0.00 0.00 3.36
205 206 2.876550 ACAAAGCCAAGGTTAACGAGAC 59.123 45.455 0.00 0.00 0.00 3.36
207 208 3.304458 GGAACAAAGCCAAGGTTAACGAG 60.304 47.826 0.00 0.00 0.00 4.18
208 209 2.619646 GGAACAAAGCCAAGGTTAACGA 59.380 45.455 0.00 0.00 0.00 3.85
210 211 3.798889 GCAGGAACAAAGCCAAGGTTAAC 60.799 47.826 0.00 0.00 0.00 2.01
212 213 1.960689 GCAGGAACAAAGCCAAGGTTA 59.039 47.619 0.00 0.00 0.00 2.85
216 217 1.938016 GCATGCAGGAACAAAGCCAAG 60.938 52.381 14.21 0.00 0.00 3.61
217 218 0.033781 GCATGCAGGAACAAAGCCAA 59.966 50.000 14.21 0.00 0.00 4.52
222 223 0.680618 CCAAGGCATGCAGGAACAAA 59.319 50.000 21.36 0.00 0.00 2.83
229 230 1.687563 TGATGATCCAAGGCATGCAG 58.312 50.000 21.36 8.55 0.00 4.41
232 233 2.742589 CGAGATGATGATCCAAGGCATG 59.257 50.000 0.00 0.00 0.00 4.06
254 255 1.872952 GGCTTTGGATGTTGTTTTGCC 59.127 47.619 0.00 0.00 0.00 4.52
257 258 2.035632 TCCGGCTTTGGATGTTGTTTT 58.964 42.857 0.00 0.00 31.53 2.43
259 260 1.202879 TCTCCGGCTTTGGATGTTGTT 60.203 47.619 0.00 0.00 37.41 2.83
264 265 2.042686 TGATTCTCCGGCTTTGGATG 57.957 50.000 0.00 0.00 37.41 3.51
265 266 4.137543 GTTATGATTCTCCGGCTTTGGAT 58.862 43.478 0.00 0.00 37.41 3.41
312 314 3.566322 AGACATGCTACCTTCTACTAGCG 59.434 47.826 0.00 0.00 38.61 4.26
313 315 5.163499 ACAAGACATGCTACCTTCTACTAGC 60.163 44.000 0.00 0.00 36.65 3.42
314 316 6.127591 ACACAAGACATGCTACCTTCTACTAG 60.128 42.308 0.00 0.00 0.00 2.57
315 317 5.715279 ACACAAGACATGCTACCTTCTACTA 59.285 40.000 0.00 0.00 0.00 1.82
316 318 4.528596 ACACAAGACATGCTACCTTCTACT 59.471 41.667 0.00 0.00 0.00 2.57
317 319 4.822026 ACACAAGACATGCTACCTTCTAC 58.178 43.478 0.00 0.00 0.00 2.59
377 391 2.906354 CCCAGGTAAATTGAGAGTCCG 58.094 52.381 0.00 0.00 0.00 4.79
381 395 2.019984 GCTGCCCAGGTAAATTGAGAG 58.980 52.381 0.00 0.00 0.00 3.20
386 400 2.309136 AGTTGCTGCCCAGGTAAATT 57.691 45.000 0.00 0.00 0.00 1.82
462 476 2.423538 GACATTTGACTAGCCGCCAATT 59.576 45.455 0.00 0.00 0.00 2.32
501 515 1.806623 CGTGCAGGTAATAGGTGGCTC 60.807 57.143 0.00 0.00 0.00 4.70
515 529 2.221055 GGAGCGGAATTATAACGTGCAG 59.779 50.000 0.00 0.00 0.00 4.41
576 617 3.822594 TCGTGTCCAATTTCAATTCCG 57.177 42.857 0.00 0.00 0.00 4.30
597 638 4.386867 TTTTGCCGAATTGTGGTGTTTA 57.613 36.364 0.00 0.00 0.00 2.01
620 661 4.157289 TGAAATTCTACGTCCGAAGTAGCT 59.843 41.667 14.61 0.00 40.85 3.32
621 662 4.418392 TGAAATTCTACGTCCGAAGTAGC 58.582 43.478 14.61 3.73 40.85 3.58
624 665 4.516365 ACTGAAATTCTACGTCCGAAGT 57.484 40.909 0.00 0.00 0.00 3.01
639 680 5.333492 CGACAAATTAACACGCCTACTGAAA 60.333 40.000 0.00 0.00 0.00 2.69
648 690 5.019498 CAGATAACCGACAAATTAACACGC 58.981 41.667 0.00 0.00 0.00 5.34
707 750 8.883731 CGATTTGTAAAGGTTGAGAGTTGATAT 58.116 33.333 0.00 0.00 0.00 1.63
731 1962 1.021202 CAAGTTTGTGCAGTTCCCGA 58.979 50.000 0.00 0.00 0.00 5.14
733 1964 1.748493 TGACAAGTTTGTGCAGTTCCC 59.252 47.619 1.62 0.00 42.43 3.97
755 1986 1.728971 GTGTGAAATCTGTCGCCTCAG 59.271 52.381 0.00 0.00 36.85 3.35
756 1987 1.344438 AGTGTGAAATCTGTCGCCTCA 59.656 47.619 0.00 0.00 0.00 3.86
791 2022 2.454538 CCCCGTCCCATACTATAGGAC 58.545 57.143 4.43 4.07 45.49 3.85
793 2024 1.861982 CCCCCGTCCCATACTATAGG 58.138 60.000 4.43 0.00 0.00 2.57
809 2040 4.889995 AGTAACGTTGTATACTACTCCCCC 59.110 45.833 11.99 1.08 30.78 5.40
810 2041 6.095440 TGAAGTAACGTTGTATACTACTCCCC 59.905 42.308 11.99 0.00 32.24 4.81
811 2042 7.088589 TGAAGTAACGTTGTATACTACTCCC 57.911 40.000 11.99 1.49 32.24 4.30
812 2043 9.230932 GATTGAAGTAACGTTGTATACTACTCC 57.769 37.037 11.99 0.00 32.24 3.85
813 2044 9.778993 TGATTGAAGTAACGTTGTATACTACTC 57.221 33.333 11.99 2.65 32.24 2.59
816 2047 9.577110 CCTTGATTGAAGTAACGTTGTATACTA 57.423 33.333 11.99 0.00 32.24 1.82
819 2050 6.819649 CCCCTTGATTGAAGTAACGTTGTATA 59.180 38.462 11.99 0.00 0.00 1.47
821 2052 4.998672 CCCCTTGATTGAAGTAACGTTGTA 59.001 41.667 11.99 0.00 0.00 2.41
825 2291 4.360951 TTCCCCTTGATTGAAGTAACGT 57.639 40.909 0.00 0.00 0.00 3.99
960 2435 1.068250 GCGAGGGGATTCGAGGAAG 59.932 63.158 0.00 0.00 43.03 3.46
983 2458 1.609072 CCATTAGCGATCGAGACTGGA 59.391 52.381 21.57 0.73 0.00 3.86
1080 2575 1.002366 CGACAGCATTGGTGAGTAGC 58.998 55.000 21.85 5.40 34.87 3.58
1083 2578 1.672356 GCCGACAGCATTGGTGAGT 60.672 57.895 21.85 0.57 42.97 3.41
1128 2623 2.847234 AGCAGGGACCGTGGTGAA 60.847 61.111 17.61 0.00 0.00 3.18
1201 2699 4.457496 GCCGCTGGAGCAGTAGCA 62.457 66.667 0.00 0.00 45.49 3.49
1364 2870 0.601046 CCAGCATACGCCGATCACAT 60.601 55.000 0.00 0.00 39.83 3.21
1377 2883 2.048023 CGTTGGCCATCACCAGCAT 61.048 57.895 6.09 0.00 40.70 3.79
1380 2886 3.443045 GCCGTTGGCCATCACCAG 61.443 66.667 6.09 0.00 44.06 4.00
1605 3116 2.202932 GTCATCGACATGGCCGCT 60.203 61.111 0.00 0.00 32.09 5.52
1689 3200 3.047280 GGCATCGCGTGAACCACA 61.047 61.111 14.61 0.00 33.40 4.17
1727 3238 2.045926 ACAGCATCTCCAACGCCC 60.046 61.111 0.00 0.00 0.00 6.13
1813 3324 4.753662 CCTCCTCCCCGTCACCGA 62.754 72.222 0.00 0.00 35.63 4.69
1817 3328 2.367202 GCATTCCTCCTCCCCGTCA 61.367 63.158 0.00 0.00 0.00 4.35
1846 3357 2.869503 TTCGAATTCCCTGGCTCCGC 62.870 60.000 0.00 0.00 0.00 5.54
1847 3358 0.179045 ATTCGAATTCCCTGGCTCCG 60.179 55.000 4.39 0.00 0.00 4.63
1848 3359 1.134098 TCATTCGAATTCCCTGGCTCC 60.134 52.381 8.21 0.00 0.00 4.70
1849 3360 2.216898 CTCATTCGAATTCCCTGGCTC 58.783 52.381 8.21 0.00 0.00 4.70
1850 3361 1.133976 CCTCATTCGAATTCCCTGGCT 60.134 52.381 8.21 0.00 0.00 4.75
1851 3362 1.134098 TCCTCATTCGAATTCCCTGGC 60.134 52.381 8.21 0.00 0.00 4.85
1852 3363 2.486191 CCTCCTCATTCGAATTCCCTGG 60.486 54.545 8.21 6.61 0.00 4.45
1853 3364 2.486191 CCCTCCTCATTCGAATTCCCTG 60.486 54.545 8.21 0.00 0.00 4.45
1854 3365 1.771255 CCCTCCTCATTCGAATTCCCT 59.229 52.381 8.21 0.00 0.00 4.20
1855 3366 1.815795 GCCCTCCTCATTCGAATTCCC 60.816 57.143 8.21 0.00 0.00 3.97
1856 3367 1.598882 GCCCTCCTCATTCGAATTCC 58.401 55.000 8.21 0.00 0.00 3.01
1857 3368 1.134098 TGGCCCTCCTCATTCGAATTC 60.134 52.381 8.21 0.00 0.00 2.17
1858 3369 0.918983 TGGCCCTCCTCATTCGAATT 59.081 50.000 8.21 0.00 0.00 2.17
1859 3370 0.918983 TTGGCCCTCCTCATTCGAAT 59.081 50.000 4.39 4.39 0.00 3.34
1860 3371 0.253044 CTTGGCCCTCCTCATTCGAA 59.747 55.000 0.00 0.00 0.00 3.71
1861 3372 0.909610 ACTTGGCCCTCCTCATTCGA 60.910 55.000 0.00 0.00 0.00 3.71
1862 3373 0.830648 TACTTGGCCCTCCTCATTCG 59.169 55.000 0.00 0.00 0.00 3.34
1863 3374 3.217626 CAATACTTGGCCCTCCTCATTC 58.782 50.000 0.00 0.00 0.00 2.67
1864 3375 2.582636 ACAATACTTGGCCCTCCTCATT 59.417 45.455 0.00 0.00 34.12 2.57
1865 3376 2.208872 ACAATACTTGGCCCTCCTCAT 58.791 47.619 0.00 0.00 34.12 2.90
1866 3377 1.668826 ACAATACTTGGCCCTCCTCA 58.331 50.000 0.00 0.00 34.12 3.86
1867 3378 2.808906 AACAATACTTGGCCCTCCTC 57.191 50.000 0.00 0.00 34.12 3.71
1868 3379 3.527665 ACATAACAATACTTGGCCCTCCT 59.472 43.478 0.00 0.00 34.12 3.69
1869 3380 3.883489 GACATAACAATACTTGGCCCTCC 59.117 47.826 0.00 0.00 34.12 4.30
1870 3381 4.781934 AGACATAACAATACTTGGCCCTC 58.218 43.478 0.00 0.00 34.12 4.30
1871 3382 4.862641 AGACATAACAATACTTGGCCCT 57.137 40.909 0.00 0.00 34.12 5.19
1872 3383 4.705023 ACAAGACATAACAATACTTGGCCC 59.295 41.667 0.00 0.00 41.15 5.80
1873 3384 5.897377 ACAAGACATAACAATACTTGGCC 57.103 39.130 0.00 0.00 41.15 5.36
1874 3385 8.263940 TCTAACAAGACATAACAATACTTGGC 57.736 34.615 0.00 0.00 41.15 4.52
1875 3386 9.653287 TCTCTAACAAGACATAACAATACTTGG 57.347 33.333 0.00 0.00 41.15 3.61
1877 3388 9.877178 CCTCTCTAACAAGACATAACAATACTT 57.123 33.333 0.00 0.00 0.00 2.24
1878 3389 8.478877 CCCTCTCTAACAAGACATAACAATACT 58.521 37.037 0.00 0.00 0.00 2.12
1879 3390 7.224949 GCCCTCTCTAACAAGACATAACAATAC 59.775 40.741 0.00 0.00 0.00 1.89
1880 3391 7.272978 GCCCTCTCTAACAAGACATAACAATA 58.727 38.462 0.00 0.00 0.00 1.90
1881 3392 6.116126 GCCCTCTCTAACAAGACATAACAAT 58.884 40.000 0.00 0.00 0.00 2.71
1882 3393 5.488341 GCCCTCTCTAACAAGACATAACAA 58.512 41.667 0.00 0.00 0.00 2.83
1883 3394 4.081087 GGCCCTCTCTAACAAGACATAACA 60.081 45.833 0.00 0.00 0.00 2.41
1884 3395 4.081087 TGGCCCTCTCTAACAAGACATAAC 60.081 45.833 0.00 0.00 0.00 1.89
1885 3396 4.101114 TGGCCCTCTCTAACAAGACATAA 58.899 43.478 0.00 0.00 0.00 1.90
1886 3397 3.706594 CTGGCCCTCTCTAACAAGACATA 59.293 47.826 0.00 0.00 0.00 2.29
1887 3398 2.503356 CTGGCCCTCTCTAACAAGACAT 59.497 50.000 0.00 0.00 0.00 3.06
1888 3399 1.902508 CTGGCCCTCTCTAACAAGACA 59.097 52.381 0.00 0.00 0.00 3.41
1889 3400 1.903183 ACTGGCCCTCTCTAACAAGAC 59.097 52.381 0.00 0.00 0.00 3.01
1890 3401 2.327325 ACTGGCCCTCTCTAACAAGA 57.673 50.000 0.00 0.00 0.00 3.02
1891 3402 2.303022 TGAACTGGCCCTCTCTAACAAG 59.697 50.000 0.00 0.00 0.00 3.16
1892 3403 2.334977 TGAACTGGCCCTCTCTAACAA 58.665 47.619 0.00 0.00 0.00 2.83
1893 3404 2.024176 TGAACTGGCCCTCTCTAACA 57.976 50.000 0.00 0.00 0.00 2.41
1894 3405 4.755266 TTATGAACTGGCCCTCTCTAAC 57.245 45.455 0.00 0.00 0.00 2.34
1895 3406 5.772393 TTTTATGAACTGGCCCTCTCTAA 57.228 39.130 0.00 0.00 0.00 2.10
1896 3407 5.772393 TTTTTATGAACTGGCCCTCTCTA 57.228 39.130 0.00 0.00 0.00 2.43
1897 3408 4.657814 TTTTTATGAACTGGCCCTCTCT 57.342 40.909 0.00 0.00 0.00 3.10
1898 3409 5.885912 TGTATTTTTATGAACTGGCCCTCTC 59.114 40.000 0.00 0.00 0.00 3.20
1899 3410 5.826643 TGTATTTTTATGAACTGGCCCTCT 58.173 37.500 0.00 0.00 0.00 3.69
1900 3411 6.321181 TGATGTATTTTTATGAACTGGCCCTC 59.679 38.462 0.00 0.00 0.00 4.30
1901 3412 6.194235 TGATGTATTTTTATGAACTGGCCCT 58.806 36.000 0.00 0.00 0.00 5.19
1902 3413 6.463995 TGATGTATTTTTATGAACTGGCCC 57.536 37.500 0.00 0.00 0.00 5.80
1903 3414 8.947055 AAATGATGTATTTTTATGAACTGGCC 57.053 30.769 0.00 0.00 35.47 5.36
1916 3427 9.270640 TGTTTTTGCTGCTAAAATGATGTATTT 57.729 25.926 21.18 0.00 40.67 1.40
1917 3428 8.830201 TGTTTTTGCTGCTAAAATGATGTATT 57.170 26.923 21.18 0.00 30.39 1.89
1918 3429 9.090692 GATGTTTTTGCTGCTAAAATGATGTAT 57.909 29.630 21.18 11.21 30.39 2.29
1919 3430 8.087136 TGATGTTTTTGCTGCTAAAATGATGTA 58.913 29.630 21.18 7.28 30.39 2.29
1920 3431 6.930164 TGATGTTTTTGCTGCTAAAATGATGT 59.070 30.769 21.18 8.96 30.39 3.06
1921 3432 7.354025 TGATGTTTTTGCTGCTAAAATGATG 57.646 32.000 21.18 0.00 30.39 3.07
1922 3433 7.966246 TTGATGTTTTTGCTGCTAAAATGAT 57.034 28.000 21.18 16.52 30.39 2.45
1923 3434 7.495279 ACTTTGATGTTTTTGCTGCTAAAATGA 59.505 29.630 21.18 13.33 30.39 2.57
1924 3435 7.632721 ACTTTGATGTTTTTGCTGCTAAAATG 58.367 30.769 21.18 10.51 30.39 2.32
1925 3436 7.790823 ACTTTGATGTTTTTGCTGCTAAAAT 57.209 28.000 21.18 9.52 30.39 1.82
1926 3437 7.608308 AACTTTGATGTTTTTGCTGCTAAAA 57.392 28.000 16.01 16.01 0.00 1.52
1927 3438 7.608308 AAACTTTGATGTTTTTGCTGCTAAA 57.392 28.000 5.17 5.17 36.86 1.85
1928 3439 7.761704 TGTAAACTTTGATGTTTTTGCTGCTAA 59.238 29.630 0.00 0.00 40.23 3.09
1929 3440 7.221838 GTGTAAACTTTGATGTTTTTGCTGCTA 59.778 33.333 0.00 0.00 40.23 3.49
1930 3441 6.035975 GTGTAAACTTTGATGTTTTTGCTGCT 59.964 34.615 0.00 0.00 40.23 4.24
1931 3442 6.035975 AGTGTAAACTTTGATGTTTTTGCTGC 59.964 34.615 0.00 0.00 40.23 5.25
1932 3443 7.524294 AGTGTAAACTTTGATGTTTTTGCTG 57.476 32.000 0.00 0.00 40.23 4.41
1933 3444 9.816354 ATTAGTGTAAACTTTGATGTTTTTGCT 57.184 25.926 0.00 0.00 40.23 3.91
1959 3470 9.175312 CCTAACACTACTGATTTGAGTCTAGTA 57.825 37.037 0.00 0.00 0.00 1.82
1960 3471 7.122948 CCCTAACACTACTGATTTGAGTCTAGT 59.877 40.741 0.00 0.00 0.00 2.57
1961 3472 7.416890 CCCCTAACACTACTGATTTGAGTCTAG 60.417 44.444 0.00 0.00 0.00 2.43
1962 3473 6.380274 CCCCTAACACTACTGATTTGAGTCTA 59.620 42.308 0.00 0.00 0.00 2.59
1963 3474 5.187967 CCCCTAACACTACTGATTTGAGTCT 59.812 44.000 0.00 0.00 0.00 3.24
1964 3475 5.420409 CCCCTAACACTACTGATTTGAGTC 58.580 45.833 0.00 0.00 0.00 3.36
1965 3476 4.225267 CCCCCTAACACTACTGATTTGAGT 59.775 45.833 0.00 0.00 0.00 3.41
1966 3477 4.770795 CCCCCTAACACTACTGATTTGAG 58.229 47.826 0.00 0.00 0.00 3.02
1967 3478 4.837093 CCCCCTAACACTACTGATTTGA 57.163 45.455 0.00 0.00 0.00 2.69
2144 3936 1.202114 GCGGACTGCAAAATCAATCCA 59.798 47.619 0.00 0.00 45.45 3.41
2240 4037 1.066858 TCGTGTTCCTTGCATCCTCTC 60.067 52.381 0.00 0.00 0.00 3.20
2245 4042 2.143122 TGTCTTCGTGTTCCTTGCATC 58.857 47.619 0.00 0.00 0.00 3.91
2273 4079 2.252898 AGTGGCTCCCTCCTCCTCT 61.253 63.158 0.00 0.00 0.00 3.69
2287 4096 1.241990 TTCGTCCTCCTCGTCAGTGG 61.242 60.000 0.00 0.00 0.00 4.00
2342 4151 3.241530 AGCCTCCGTTCCAGCACA 61.242 61.111 0.00 0.00 0.00 4.57
2527 4336 2.204237 ACGTCGGTTGTTTGGTTCTAC 58.796 47.619 0.00 0.00 0.00 2.59
2528 4337 2.472816 GACGTCGGTTGTTTGGTTCTA 58.527 47.619 0.00 0.00 0.00 2.10
2529 4338 1.292992 GACGTCGGTTGTTTGGTTCT 58.707 50.000 0.00 0.00 0.00 3.01
2530 4339 0.305617 GGACGTCGGTTGTTTGGTTC 59.694 55.000 9.92 0.00 0.00 3.62
2531 4340 1.430707 CGGACGTCGGTTGTTTGGTT 61.431 55.000 14.48 0.00 34.75 3.67
2532 4341 1.884004 CGGACGTCGGTTGTTTGGT 60.884 57.895 14.48 0.00 34.75 3.67
2533 4342 1.824272 GACGGACGTCGGTTGTTTGG 61.824 60.000 26.79 3.08 44.45 3.28
2534 4343 1.561250 GACGGACGTCGGTTGTTTG 59.439 57.895 26.79 4.54 44.45 2.93
2535 4344 4.017092 GACGGACGTCGGTTGTTT 57.983 55.556 26.79 6.55 44.45 2.83
2543 4352 1.279527 TGATTGTTGCGACGGACGTC 61.280 55.000 14.38 14.38 44.60 4.34
2544 4353 0.669318 ATGATTGTTGCGACGGACGT 60.669 50.000 0.00 0.00 44.60 4.34
2545 4354 0.025001 GATGATTGTTGCGACGGACG 59.975 55.000 0.00 0.00 45.66 4.79
2546 4355 0.373716 GGATGATTGTTGCGACGGAC 59.626 55.000 0.00 0.00 0.00 4.79
2547 4356 0.249120 AGGATGATTGTTGCGACGGA 59.751 50.000 0.00 0.00 0.00 4.69
2548 4357 0.374758 CAGGATGATTGTTGCGACGG 59.625 55.000 0.00 0.00 39.69 4.79
2549 4358 0.374758 CCAGGATGATTGTTGCGACG 59.625 55.000 0.00 0.00 39.69 5.12
2550 4359 0.099436 GCCAGGATGATTGTTGCGAC 59.901 55.000 0.00 0.00 39.69 5.19
2551 4360 0.322366 TGCCAGGATGATTGTTGCGA 60.322 50.000 0.00 0.00 39.69 5.10
2552 4361 0.742505 ATGCCAGGATGATTGTTGCG 59.257 50.000 0.00 0.00 39.69 4.85
2553 4362 1.752498 TCATGCCAGGATGATTGTTGC 59.248 47.619 0.00 0.00 39.69 4.17
2554 4363 2.100252 GGTCATGCCAGGATGATTGTTG 59.900 50.000 5.09 0.00 39.69 3.33
2555 4364 2.381911 GGTCATGCCAGGATGATTGTT 58.618 47.619 5.09 0.00 39.69 2.83
2556 4365 1.410648 GGGTCATGCCAGGATGATTGT 60.411 52.381 5.09 0.00 39.69 2.71
2557 4366 1.133575 AGGGTCATGCCAGGATGATTG 60.134 52.381 5.09 0.00 39.69 2.67
2558 4367 1.229131 AGGGTCATGCCAGGATGATT 58.771 50.000 5.09 0.00 39.69 2.57
2559 4368 1.229131 AAGGGTCATGCCAGGATGAT 58.771 50.000 5.09 0.00 39.69 2.45
2560 4369 1.002069 AAAGGGTCATGCCAGGATGA 58.998 50.000 8.20 0.00 39.69 2.92
2561 4370 1.856629 AAAAGGGTCATGCCAGGATG 58.143 50.000 8.20 0.00 39.65 3.51
2562 4371 2.629017 AAAAAGGGTCATGCCAGGAT 57.371 45.000 8.20 0.00 39.65 3.24
2578 4387 6.715718 TGGAATACGGTTGTTCCATCTAAAAA 59.284 34.615 18.22 0.73 45.43 1.94
2579 4388 6.239396 TGGAATACGGTTGTTCCATCTAAAA 58.761 36.000 18.22 1.28 45.43 1.52
2580 4389 5.806818 TGGAATACGGTTGTTCCATCTAAA 58.193 37.500 18.22 1.82 45.43 1.85
2581 4390 5.423704 TGGAATACGGTTGTTCCATCTAA 57.576 39.130 18.22 2.35 45.43 2.10
2583 4392 3.992943 TGGAATACGGTTGTTCCATCT 57.007 42.857 18.22 0.00 45.43 2.90
2587 4396 4.201980 GCCTTAATGGAATACGGTTGTTCC 60.202 45.833 14.55 14.55 42.15 3.62
2588 4397 4.396790 TGCCTTAATGGAATACGGTTGTTC 59.603 41.667 0.00 0.00 38.35 3.18
2589 4398 4.157105 GTGCCTTAATGGAATACGGTTGTT 59.843 41.667 0.00 0.00 38.35 2.83
2590 4399 3.692593 GTGCCTTAATGGAATACGGTTGT 59.307 43.478 0.00 0.00 38.35 3.32
2591 4400 3.242608 CGTGCCTTAATGGAATACGGTTG 60.243 47.826 0.00 0.00 38.35 3.77
2592 4401 2.940410 CGTGCCTTAATGGAATACGGTT 59.060 45.455 0.00 0.00 38.35 4.44
2593 4402 2.168936 TCGTGCCTTAATGGAATACGGT 59.831 45.455 0.00 0.00 38.65 4.83
2594 4403 2.542595 GTCGTGCCTTAATGGAATACGG 59.457 50.000 0.00 0.00 38.65 4.02
2595 4404 3.454375 AGTCGTGCCTTAATGGAATACG 58.546 45.455 0.00 0.00 39.11 3.06
2596 4405 6.913873 TTTAGTCGTGCCTTAATGGAATAC 57.086 37.500 0.00 0.00 38.35 1.89
2597 4406 7.276658 TGATTTAGTCGTGCCTTAATGGAATA 58.723 34.615 0.00 0.00 38.35 1.75
2598 4407 6.119536 TGATTTAGTCGTGCCTTAATGGAAT 58.880 36.000 0.00 0.00 38.35 3.01
2599 4408 5.492895 TGATTTAGTCGTGCCTTAATGGAA 58.507 37.500 0.00 0.00 38.35 3.53
2600 4409 5.092554 TGATTTAGTCGTGCCTTAATGGA 57.907 39.130 0.00 0.00 38.35 3.41
2601 4410 5.333339 CGATGATTTAGTCGTGCCTTAATGG 60.333 44.000 0.00 0.00 34.50 3.16
2602 4411 5.333339 CCGATGATTTAGTCGTGCCTTAATG 60.333 44.000 0.00 0.00 36.17 1.90
2603 4412 4.750098 CCGATGATTTAGTCGTGCCTTAAT 59.250 41.667 0.00 0.00 36.17 1.40
2604 4413 4.116961 CCGATGATTTAGTCGTGCCTTAA 58.883 43.478 0.00 0.00 36.17 1.85
2605 4414 3.131577 ACCGATGATTTAGTCGTGCCTTA 59.868 43.478 0.00 0.00 36.17 2.69
2606 4415 2.093658 ACCGATGATTTAGTCGTGCCTT 60.094 45.455 0.00 0.00 36.17 4.35
2607 4416 1.480954 ACCGATGATTTAGTCGTGCCT 59.519 47.619 0.00 0.00 36.17 4.75
2608 4417 1.935933 ACCGATGATTTAGTCGTGCC 58.064 50.000 0.00 0.00 36.17 5.01
2609 4418 3.861113 TGTAACCGATGATTTAGTCGTGC 59.139 43.478 0.00 0.00 36.17 5.34
2610 4419 4.026804 GCTGTAACCGATGATTTAGTCGTG 60.027 45.833 0.00 0.00 36.17 4.35
2611 4420 4.110482 GCTGTAACCGATGATTTAGTCGT 58.890 43.478 0.00 0.00 36.17 4.34
2612 4421 4.026804 GTGCTGTAACCGATGATTTAGTCG 60.027 45.833 0.00 0.00 37.58 4.18
2613 4422 4.868171 TGTGCTGTAACCGATGATTTAGTC 59.132 41.667 0.00 0.00 0.00 2.59
2614 4423 4.827692 TGTGCTGTAACCGATGATTTAGT 58.172 39.130 0.00 0.00 0.00 2.24
2615 4424 5.351465 ACTTGTGCTGTAACCGATGATTTAG 59.649 40.000 0.00 0.00 0.00 1.85
2616 4425 5.242434 ACTTGTGCTGTAACCGATGATTTA 58.758 37.500 0.00 0.00 0.00 1.40
2617 4426 4.072131 ACTTGTGCTGTAACCGATGATTT 58.928 39.130 0.00 0.00 0.00 2.17
2618 4427 3.674997 ACTTGTGCTGTAACCGATGATT 58.325 40.909 0.00 0.00 0.00 2.57
2619 4428 3.334583 ACTTGTGCTGTAACCGATGAT 57.665 42.857 0.00 0.00 0.00 2.45
2620 4429 2.831685 ACTTGTGCTGTAACCGATGA 57.168 45.000 0.00 0.00 0.00 2.92
2621 4430 3.743911 TGTAACTTGTGCTGTAACCGATG 59.256 43.478 0.00 0.00 0.00 3.84
2622 4431 3.997762 TGTAACTTGTGCTGTAACCGAT 58.002 40.909 0.00 0.00 0.00 4.18
2623 4432 3.455990 TGTAACTTGTGCTGTAACCGA 57.544 42.857 0.00 0.00 0.00 4.69
2624 4433 3.743911 TGATGTAACTTGTGCTGTAACCG 59.256 43.478 0.00 0.00 0.00 4.44
2625 4434 5.411361 TGATGATGTAACTTGTGCTGTAACC 59.589 40.000 0.00 0.00 0.00 2.85
2626 4435 6.368791 TCTGATGATGTAACTTGTGCTGTAAC 59.631 38.462 0.00 0.00 0.00 2.50
2627 4436 6.463360 TCTGATGATGTAACTTGTGCTGTAA 58.537 36.000 0.00 0.00 0.00 2.41
2628 4437 6.036577 TCTGATGATGTAACTTGTGCTGTA 57.963 37.500 0.00 0.00 0.00 2.74
2629 4438 4.898320 TCTGATGATGTAACTTGTGCTGT 58.102 39.130 0.00 0.00 0.00 4.40
2630 4439 5.868043 TTCTGATGATGTAACTTGTGCTG 57.132 39.130 0.00 0.00 0.00 4.41
2631 4440 7.334090 ACTATTCTGATGATGTAACTTGTGCT 58.666 34.615 0.00 0.00 0.00 4.40
2632 4441 7.545362 ACTATTCTGATGATGTAACTTGTGC 57.455 36.000 0.00 0.00 0.00 4.57
2634 4443 9.823647 CCTAACTATTCTGATGATGTAACTTGT 57.176 33.333 0.00 0.00 0.00 3.16
2635 4444 9.265901 CCCTAACTATTCTGATGATGTAACTTG 57.734 37.037 0.00 0.00 0.00 3.16
2636 4445 9.213777 TCCCTAACTATTCTGATGATGTAACTT 57.786 33.333 0.00 0.00 0.00 2.66
2637 4446 8.783660 TCCCTAACTATTCTGATGATGTAACT 57.216 34.615 0.00 0.00 0.00 2.24
2638 4447 9.262358 GTTCCCTAACTATTCTGATGATGTAAC 57.738 37.037 0.00 0.00 32.54 2.50
2639 4448 8.429641 GGTTCCCTAACTATTCTGATGATGTAA 58.570 37.037 0.00 0.00 35.81 2.41
2640 4449 7.567250 TGGTTCCCTAACTATTCTGATGATGTA 59.433 37.037 0.00 0.00 35.81 2.29
2641 4450 6.386927 TGGTTCCCTAACTATTCTGATGATGT 59.613 38.462 0.00 0.00 35.81 3.06
2642 4451 6.708054 GTGGTTCCCTAACTATTCTGATGATG 59.292 42.308 0.00 0.00 35.81 3.07
2643 4452 6.617371 AGTGGTTCCCTAACTATTCTGATGAT 59.383 38.462 0.00 0.00 35.81 2.45
2644 4453 5.964477 AGTGGTTCCCTAACTATTCTGATGA 59.036 40.000 0.00 0.00 35.81 2.92
2645 4454 6.051717 CAGTGGTTCCCTAACTATTCTGATG 58.948 44.000 0.00 0.00 35.81 3.07
2646 4455 5.131142 CCAGTGGTTCCCTAACTATTCTGAT 59.869 44.000 0.00 0.00 35.81 2.90
2647 4456 4.469945 CCAGTGGTTCCCTAACTATTCTGA 59.530 45.833 0.00 0.00 35.81 3.27
2648 4457 4.225267 ACCAGTGGTTCCCTAACTATTCTG 59.775 45.833 9.70 0.00 35.81 3.02
2649 4458 4.436079 ACCAGTGGTTCCCTAACTATTCT 58.564 43.478 9.70 0.00 35.81 2.40
2650 4459 4.838904 ACCAGTGGTTCCCTAACTATTC 57.161 45.455 9.70 0.00 35.81 1.75
2651 4460 6.027482 TCTAACCAGTGGTTCCCTAACTATT 58.973 40.000 30.65 5.36 43.05 1.73
2652 4461 5.424573 GTCTAACCAGTGGTTCCCTAACTAT 59.575 44.000 30.65 5.91 43.05 2.12
2653 4462 4.774200 GTCTAACCAGTGGTTCCCTAACTA 59.226 45.833 30.65 10.13 43.05 2.24
2654 4463 3.581770 GTCTAACCAGTGGTTCCCTAACT 59.418 47.826 30.65 7.49 43.05 2.24
2655 4464 3.615834 CGTCTAACCAGTGGTTCCCTAAC 60.616 52.174 30.65 19.22 43.05 2.34
2656 4465 2.564062 CGTCTAACCAGTGGTTCCCTAA 59.436 50.000 30.65 12.38 43.05 2.69
2657 4466 2.173519 CGTCTAACCAGTGGTTCCCTA 58.826 52.381 30.65 12.77 43.05 3.53
2658 4467 0.974383 CGTCTAACCAGTGGTTCCCT 59.026 55.000 30.65 10.28 43.05 4.20
2659 4468 0.672711 GCGTCTAACCAGTGGTTCCC 60.673 60.000 30.65 17.59 43.05 3.97
2660 4469 0.320697 AGCGTCTAACCAGTGGTTCC 59.679 55.000 30.65 17.92 43.05 3.62
2661 4470 1.672145 GGAGCGTCTAACCAGTGGTTC 60.672 57.143 30.65 15.99 43.05 3.62
2663 4472 0.830444 TGGAGCGTCTAACCAGTGGT 60.830 55.000 9.70 9.70 37.65 4.16
2664 4473 0.108615 CTGGAGCGTCTAACCAGTGG 60.109 60.000 7.91 7.91 44.06 4.00
2665 4474 3.425578 CTGGAGCGTCTAACCAGTG 57.574 57.895 0.00 0.00 44.06 3.66
2668 4477 1.292223 GTGCTGGAGCGTCTAACCA 59.708 57.895 0.00 0.00 45.83 3.67
2669 4478 1.448013 GGTGCTGGAGCGTCTAACC 60.448 63.158 0.00 0.00 45.83 2.85
2670 4479 0.815734 TAGGTGCTGGAGCGTCTAAC 59.184 55.000 0.00 0.00 45.83 2.34
2671 4480 1.552578 TTAGGTGCTGGAGCGTCTAA 58.447 50.000 8.51 8.51 45.83 2.10
2672 4481 1.681793 GATTAGGTGCTGGAGCGTCTA 59.318 52.381 0.00 0.00 45.83 2.59
2673 4482 0.461961 GATTAGGTGCTGGAGCGTCT 59.538 55.000 0.00 0.00 45.83 4.18
2674 4483 0.872021 CGATTAGGTGCTGGAGCGTC 60.872 60.000 0.00 0.00 45.83 5.19
2675 4484 1.141881 CGATTAGGTGCTGGAGCGT 59.858 57.895 0.00 0.00 45.83 5.07
2676 4485 1.141881 ACGATTAGGTGCTGGAGCG 59.858 57.895 0.00 0.00 45.83 5.03
2677 4486 2.682893 CACGATTAGGTGCTGGAGC 58.317 57.895 0.00 0.00 42.50 4.70
2684 4493 2.287915 GCTATTGGTGCACGATTAGGTG 59.712 50.000 23.54 7.95 40.89 4.00
2685 4494 2.093181 TGCTATTGGTGCACGATTAGGT 60.093 45.455 23.54 6.02 35.31 3.08
2686 4495 2.545526 CTGCTATTGGTGCACGATTAGG 59.454 50.000 23.54 10.75 36.37 2.69
2687 4496 2.032549 GCTGCTATTGGTGCACGATTAG 60.033 50.000 20.19 20.19 36.37 1.73
2688 4497 1.939934 GCTGCTATTGGTGCACGATTA 59.060 47.619 11.45 7.01 36.37 1.75
2689 4498 0.734889 GCTGCTATTGGTGCACGATT 59.265 50.000 11.45 6.11 36.37 3.34
2690 4499 1.097547 GGCTGCTATTGGTGCACGAT 61.098 55.000 11.45 10.02 36.37 3.73
2691 4500 1.745115 GGCTGCTATTGGTGCACGA 60.745 57.895 11.45 3.44 36.37 4.35
2692 4501 1.585267 TTGGCTGCTATTGGTGCACG 61.585 55.000 11.45 0.00 36.37 5.34
2693 4502 0.109132 GTTGGCTGCTATTGGTGCAC 60.109 55.000 8.80 8.80 36.37 4.57
2694 4503 0.539207 TGTTGGCTGCTATTGGTGCA 60.539 50.000 0.00 0.00 38.81 4.57
2695 4504 0.109132 GTGTTGGCTGCTATTGGTGC 60.109 55.000 0.00 0.00 0.00 5.01
2696 4505 1.246649 TGTGTTGGCTGCTATTGGTG 58.753 50.000 0.00 0.00 0.00 4.17
2697 4506 2.220653 ATGTGTTGGCTGCTATTGGT 57.779 45.000 0.00 0.00 0.00 3.67
2698 4507 2.032054 CGTATGTGTTGGCTGCTATTGG 59.968 50.000 0.00 0.00 0.00 3.16
2699 4508 2.539547 GCGTATGTGTTGGCTGCTATTG 60.540 50.000 0.00 0.00 0.00 1.90
2700 4509 1.670811 GCGTATGTGTTGGCTGCTATT 59.329 47.619 0.00 0.00 0.00 1.73
2701 4510 1.134401 AGCGTATGTGTTGGCTGCTAT 60.134 47.619 0.00 0.00 33.81 2.97
2702 4511 0.249120 AGCGTATGTGTTGGCTGCTA 59.751 50.000 0.00 0.00 33.81 3.49
2703 4512 1.003355 AGCGTATGTGTTGGCTGCT 60.003 52.632 0.00 0.00 33.81 4.24
2704 4513 1.135315 CAGCGTATGTGTTGGCTGC 59.865 57.895 0.00 0.00 45.28 5.25
2706 4515 4.301505 CCAGCGTATGTGTTGGCT 57.698 55.556 0.00 0.00 35.84 4.75
2708 4517 1.732941 TAAGCCAGCGTATGTGTTGG 58.267 50.000 0.00 0.00 0.00 3.77
2709 4518 4.331443 TGTAATAAGCCAGCGTATGTGTTG 59.669 41.667 0.00 0.00 0.00 3.33
2710 4519 4.509616 TGTAATAAGCCAGCGTATGTGTT 58.490 39.130 0.00 0.00 0.00 3.32
2711 4520 4.131649 TGTAATAAGCCAGCGTATGTGT 57.868 40.909 0.00 0.00 0.00 3.72
2712 4521 5.466728 AGAATGTAATAAGCCAGCGTATGTG 59.533 40.000 0.00 0.00 0.00 3.21
2713 4522 5.611374 AGAATGTAATAAGCCAGCGTATGT 58.389 37.500 0.00 0.00 0.00 2.29
2714 4523 5.696270 TGAGAATGTAATAAGCCAGCGTATG 59.304 40.000 0.00 0.00 0.00 2.39
2715 4524 5.853936 TGAGAATGTAATAAGCCAGCGTAT 58.146 37.500 0.00 0.00 0.00 3.06
2716 4525 5.270893 TGAGAATGTAATAAGCCAGCGTA 57.729 39.130 0.00 0.00 0.00 4.42
2717 4526 4.137116 TGAGAATGTAATAAGCCAGCGT 57.863 40.909 0.00 0.00 0.00 5.07
2718 4527 4.083643 CCATGAGAATGTAATAAGCCAGCG 60.084 45.833 0.00 0.00 0.00 5.18
2719 4528 5.065914 TCCATGAGAATGTAATAAGCCAGC 58.934 41.667 0.00 0.00 0.00 4.85
2720 4529 7.756395 ATTCCATGAGAATGTAATAAGCCAG 57.244 36.000 8.17 0.00 43.81 4.85
2721 4530 9.234827 CATATTCCATGAGAATGTAATAAGCCA 57.765 33.333 15.59 0.00 45.11 4.75
2722 4531 9.453572 TCATATTCCATGAGAATGTAATAAGCC 57.546 33.333 15.59 0.00 45.11 4.35
2735 4544 9.531942 GCTCTGATATAGTTCATATTCCATGAG 57.468 37.037 0.00 0.00 29.49 2.90
2736 4545 8.481314 GGCTCTGATATAGTTCATATTCCATGA 58.519 37.037 0.00 0.00 29.49 3.07
2737 4546 8.484575 AGGCTCTGATATAGTTCATATTCCATG 58.515 37.037 0.00 0.00 29.49 3.66
2738 4547 8.484575 CAGGCTCTGATATAGTTCATATTCCAT 58.515 37.037 0.00 0.00 32.44 3.41
2739 4548 7.675619 TCAGGCTCTGATATAGTTCATATTCCA 59.324 37.037 1.25 0.00 35.39 3.53
2740 4549 8.072321 TCAGGCTCTGATATAGTTCATATTCC 57.928 38.462 1.25 0.00 35.39 3.01
2749 4558 9.499479 CACAATTTATTCAGGCTCTGATATAGT 57.501 33.333 5.83 0.00 40.39 2.12
2750 4559 9.499479 ACACAATTTATTCAGGCTCTGATATAG 57.501 33.333 5.83 0.00 40.39 1.31
2751 4560 9.276590 CACACAATTTATTCAGGCTCTGATATA 57.723 33.333 5.83 5.05 40.39 0.86
2752 4561 7.230108 CCACACAATTTATTCAGGCTCTGATAT 59.770 37.037 5.83 5.78 40.39 1.63
2753 4562 6.543465 CCACACAATTTATTCAGGCTCTGATA 59.457 38.462 5.83 0.00 40.39 2.15
2754 4563 5.359009 CCACACAATTTATTCAGGCTCTGAT 59.641 40.000 5.83 0.97 40.39 2.90
2755 4564 4.701651 CCACACAATTTATTCAGGCTCTGA 59.298 41.667 1.25 1.25 38.87 3.27
2756 4565 4.676196 GCCACACAATTTATTCAGGCTCTG 60.676 45.833 0.00 0.00 37.89 3.35
2757 4566 3.445096 GCCACACAATTTATTCAGGCTCT 59.555 43.478 0.00 0.00 37.89 4.09
2758 4567 3.193267 TGCCACACAATTTATTCAGGCTC 59.807 43.478 0.00 0.00 41.33 4.70
2759 4568 3.164268 TGCCACACAATTTATTCAGGCT 58.836 40.909 0.00 0.00 41.33 4.58
2760 4569 3.591196 TGCCACACAATTTATTCAGGC 57.409 42.857 0.00 0.00 41.15 4.85
2761 4570 3.928375 GCTTGCCACACAATTTATTCAGG 59.072 43.478 0.00 0.00 37.72 3.86
2762 4571 4.813027 AGCTTGCCACACAATTTATTCAG 58.187 39.130 0.00 0.00 37.72 3.02
2763 4572 4.870123 AGCTTGCCACACAATTTATTCA 57.130 36.364 0.00 0.00 37.72 2.57
2764 4573 5.119125 GTGAAGCTTGCCACACAATTTATTC 59.881 40.000 2.10 0.00 37.72 1.75
2765 4574 4.990426 GTGAAGCTTGCCACACAATTTATT 59.010 37.500 2.10 0.00 37.72 1.40
2766 4575 4.559153 GTGAAGCTTGCCACACAATTTAT 58.441 39.130 2.10 0.00 37.72 1.40
2767 4576 3.243704 GGTGAAGCTTGCCACACAATTTA 60.244 43.478 17.28 0.00 37.72 1.40
2768 4577 2.483538 GGTGAAGCTTGCCACACAATTT 60.484 45.455 17.28 0.00 37.72 1.82
2769 4578 1.069049 GGTGAAGCTTGCCACACAATT 59.931 47.619 17.28 0.00 37.72 2.32
2770 4579 0.675633 GGTGAAGCTTGCCACACAAT 59.324 50.000 17.28 0.00 37.72 2.71
2771 4580 0.395586 AGGTGAAGCTTGCCACACAA 60.396 50.000 17.28 0.00 35.13 3.33
2772 4581 0.395586 AAGGTGAAGCTTGCCACACA 60.396 50.000 17.28 0.38 35.13 3.72
2773 4582 1.604604 TAAGGTGAAGCTTGCCACAC 58.395 50.000 17.28 12.57 35.13 3.82
2774 4583 2.356665 TTAAGGTGAAGCTTGCCACA 57.643 45.000 17.28 1.43 35.13 4.17
2775 4584 3.578688 CAATTAAGGTGAAGCTTGCCAC 58.421 45.455 2.10 6.73 0.00 5.01
2776 4585 2.562298 CCAATTAAGGTGAAGCTTGCCA 59.438 45.455 2.10 0.00 0.00 4.92
2777 4586 2.825532 TCCAATTAAGGTGAAGCTTGCC 59.174 45.455 2.10 6.07 0.00 4.52
2778 4587 3.507622 ACTCCAATTAAGGTGAAGCTTGC 59.492 43.478 2.10 0.00 0.00 4.01
2779 4588 4.761739 TCACTCCAATTAAGGTGAAGCTTG 59.238 41.667 2.10 0.00 36.04 4.01
2780 4589 4.985538 TCACTCCAATTAAGGTGAAGCTT 58.014 39.130 0.00 0.00 36.04 3.74
2781 4590 4.640771 TCACTCCAATTAAGGTGAAGCT 57.359 40.909 0.00 0.00 36.04 3.74
2784 4593 5.997746 CAGACTTCACTCCAATTAAGGTGAA 59.002 40.000 14.29 14.29 43.46 3.18
2785 4594 5.071788 ACAGACTTCACTCCAATTAAGGTGA 59.928 40.000 0.00 0.00 37.00 4.02
2786 4595 5.308825 ACAGACTTCACTCCAATTAAGGTG 58.691 41.667 0.00 0.00 0.00 4.00
2787 4596 5.568620 ACAGACTTCACTCCAATTAAGGT 57.431 39.130 0.00 0.00 0.00 3.50
2788 4597 6.884280 AAACAGACTTCACTCCAATTAAGG 57.116 37.500 0.00 0.00 0.00 2.69
2791 4600 8.349983 GCTTTTAAACAGACTTCACTCCAATTA 58.650 33.333 0.00 0.00 0.00 1.40
2792 4601 7.068716 AGCTTTTAAACAGACTTCACTCCAATT 59.931 33.333 0.00 0.00 0.00 2.32
2793 4602 6.547510 AGCTTTTAAACAGACTTCACTCCAAT 59.452 34.615 0.00 0.00 0.00 3.16
2794 4603 5.885912 AGCTTTTAAACAGACTTCACTCCAA 59.114 36.000 0.00 0.00 0.00 3.53
2795 4604 5.437060 AGCTTTTAAACAGACTTCACTCCA 58.563 37.500 0.00 0.00 0.00 3.86
2816 4625 4.927425 TCGACCACTGATACAACTAAAAGC 59.073 41.667 0.00 0.00 0.00 3.51
2820 4629 6.693466 TGATTTCGACCACTGATACAACTAA 58.307 36.000 0.00 0.00 0.00 2.24
2821 4630 6.275494 TGATTTCGACCACTGATACAACTA 57.725 37.500 0.00 0.00 0.00 2.24
2831 4640 2.105821 TCAGGGTTTGATTTCGACCACT 59.894 45.455 0.00 0.00 35.11 4.00
2832 4641 2.500229 TCAGGGTTTGATTTCGACCAC 58.500 47.619 0.00 0.00 35.11 4.16
2898 4707 9.562408 TCGCAAACATATATAGGGTTGAAATTA 57.438 29.630 25.24 5.58 36.86 1.40
2923 4732 4.502645 CACGATTTTGTTTTTCCTGGTGTC 59.497 41.667 0.00 0.00 0.00 3.67
2928 4737 3.728718 CGTCCACGATTTTGTTTTTCCTG 59.271 43.478 0.00 0.00 43.02 3.86
2944 4753 0.608640 AAGTGAGTGATCCCGTCCAC 59.391 55.000 0.00 0.00 0.00 4.02
2948 4757 2.096248 GAGAGAAGTGAGTGATCCCGT 58.904 52.381 0.00 0.00 0.00 5.28
2999 4808 1.202818 GCATAAAGCGGGGAAGAGGAT 60.203 52.381 0.00 0.00 0.00 3.24
3059 4877 7.752239 TGTTCGTACTACTACATAGTGCTTTTC 59.248 37.037 1.66 0.00 44.30 2.29
3078 4902 7.981225 GGGTTGTCCTAGTATTATTTGTTCGTA 59.019 37.037 0.00 0.00 0.00 3.43
3079 4903 6.820152 GGGTTGTCCTAGTATTATTTGTTCGT 59.180 38.462 0.00 0.00 0.00 3.85
3080 4904 6.259387 GGGGTTGTCCTAGTATTATTTGTTCG 59.741 42.308 0.00 0.00 35.33 3.95
3136 4963 0.179048 TGATCCATGCCGATGTGTCC 60.179 55.000 0.00 0.00 0.00 4.02
3336 5165 2.360350 CAGGGCGTCTGGCATGTT 60.360 61.111 0.00 0.00 46.12 2.71
3349 5178 1.890041 TCGAACAACGTTGGCAGGG 60.890 57.895 30.34 15.17 43.13 4.45
3431 5260 4.477975 GCGTCTCGTCAGGGTCCG 62.478 72.222 0.00 0.00 0.00 4.79
3504 5334 3.774528 AGCAGCGGCATCGGAGAA 61.775 61.111 12.44 0.00 44.61 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.