Multiple sequence alignment - TraesCS6B01G389600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G389600 chr6B 100.000 2794 0 0 1 2794 664306105 664303312 0.000000e+00 5160.0
1 TraesCS6B01G389600 chr6B 84.069 521 73 6 1778 2296 664496462 664495950 6.950000e-136 494.0
2 TraesCS6B01G389600 chr6B 87.857 420 48 3 1 420 659613524 659613940 8.990000e-135 490.0
3 TraesCS6B01G389600 chr6B 82.852 519 83 4 1778 2296 664511299 664510787 7.050000e-126 460.0
4 TraesCS6B01G389600 chr6B 88.034 234 25 1 1910 2140 664413938 664413705 9.860000e-70 274.0
5 TraesCS6B01G389600 chr6B 95.238 63 3 0 1152 1214 664415833 664415771 1.770000e-17 100.0
6 TraesCS6B01G389600 chr6D 96.416 2260 71 6 536 2794 439601756 439599506 0.000000e+00 3716.0
7 TraesCS6B01G389600 chr6D 82.485 845 117 16 1452 2296 439642329 439641516 0.000000e+00 712.0
8 TraesCS6B01G389600 chr6A 79.199 1173 212 18 1000 2171 587955649 587954508 0.000000e+00 785.0
9 TraesCS6B01G389600 chr6A 87.558 434 51 3 4 436 451602131 451601700 1.490000e-137 499.0
10 TraesCS6B01G389600 chr6A 78.304 507 108 2 999 1504 587883911 587883406 2.680000e-85 326.0
11 TraesCS6B01G389600 chr6A 87.023 131 17 0 2166 2296 587947111 587946981 6.240000e-32 148.0
12 TraesCS6B01G389600 chr5A 89.318 440 43 3 1 438 151249408 151249845 1.460000e-152 549.0
13 TraesCS6B01G389600 chr7D 88.942 416 42 2 1 414 159711256 159711669 6.900000e-141 510.0
14 TraesCS6B01G389600 chr1B 88.729 417 47 0 4 420 519611409 519611825 6.900000e-141 510.0
15 TraesCS6B01G389600 chr1B 88.095 420 50 0 1 420 379627484 379627903 1.490000e-137 499.0
16 TraesCS6B01G389600 chr2A 88.180 423 46 2 4 423 189167138 189167559 4.150000e-138 501.0
17 TraesCS6B01G389600 chr4B 87.143 420 54 0 1 420 618630328 618630747 7.000000e-131 477.0
18 TraesCS6B01G389600 chr4A 86.364 440 56 2 1 438 604587504 604587941 7.000000e-131 477.0
19 TraesCS6B01G389600 chr1A 92.222 90 6 1 431 520 49290525 49290437 2.920000e-25 126.0
20 TraesCS6B01G389600 chr1A 88.043 92 11 0 435 526 536202984 536202893 2.940000e-20 110.0
21 TraesCS6B01G389600 chr3D 85.714 91 7 3 436 520 332161257 332161347 1.070000e-14 91.6
22 TraesCS6B01G389600 chr7A 82.895 76 11 1 535 608 56188400 56188325 1.800000e-07 67.6
23 TraesCS6B01G389600 chr1D 81.250 80 15 0 1031 1110 485963990 485964069 6.460000e-07 65.8
24 TraesCS6B01G389600 chrUn 86.792 53 7 0 1058 1110 100205811 100205863 3.010000e-05 60.2
25 TraesCS6B01G389600 chr3B 92.308 39 3 0 1241 1279 62708758 62708796 3.890000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G389600 chr6B 664303312 664306105 2793 True 5160 5160 100.000 1 2794 1 chr6B.!!$R1 2793
1 TraesCS6B01G389600 chr6B 664495950 664496462 512 True 494 494 84.069 1778 2296 1 chr6B.!!$R2 518
2 TraesCS6B01G389600 chr6B 664510787 664511299 512 True 460 460 82.852 1778 2296 1 chr6B.!!$R3 518
3 TraesCS6B01G389600 chr6D 439599506 439601756 2250 True 3716 3716 96.416 536 2794 1 chr6D.!!$R1 2258
4 TraesCS6B01G389600 chr6D 439641516 439642329 813 True 712 712 82.485 1452 2296 1 chr6D.!!$R2 844
5 TraesCS6B01G389600 chr6A 587954508 587955649 1141 True 785 785 79.199 1000 2171 1 chr6A.!!$R4 1171
6 TraesCS6B01G389600 chr6A 587883406 587883911 505 True 326 326 78.304 999 1504 1 chr6A.!!$R2 505

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
466 467 0.041312 GTGTTGCAATTCGTGACGCT 60.041 50.0 0.59 0.0 0.0 5.07 F
527 528 0.109781 CCCGAACTTCAATTGGCGTG 60.110 55.0 5.42 0.0 0.0 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1537 1539 0.09473 CCGAGGAACGCAAAATCGAC 59.905 55.0 0.0 0.0 41.07 4.20 R
1934 1936 1.16527 AACCATGAGCAACTTACCGC 58.835 50.0 0.0 0.0 0.00 5.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 2.202756 GCCCGGCGTTAGAGAGTG 60.203 66.667 6.01 0.00 0.00 3.51
27 28 2.707849 GCCCGGCGTTAGAGAGTGA 61.708 63.158 6.01 0.00 0.00 3.41
28 29 1.433879 CCCGGCGTTAGAGAGTGAG 59.566 63.158 6.01 0.00 0.00 3.51
29 30 1.313812 CCCGGCGTTAGAGAGTGAGT 61.314 60.000 6.01 0.00 0.00 3.41
30 31 0.179161 CCGGCGTTAGAGAGTGAGTG 60.179 60.000 6.01 0.00 0.00 3.51
31 32 0.179161 CGGCGTTAGAGAGTGAGTGG 60.179 60.000 0.00 0.00 0.00 4.00
32 33 0.889306 GGCGTTAGAGAGTGAGTGGT 59.111 55.000 0.00 0.00 0.00 4.16
33 34 1.135344 GGCGTTAGAGAGTGAGTGGTC 60.135 57.143 0.00 0.00 0.00 4.02
34 35 1.540267 GCGTTAGAGAGTGAGTGGTCA 59.460 52.381 0.00 0.00 0.00 4.02
35 36 2.414824 GCGTTAGAGAGTGAGTGGTCAG 60.415 54.545 0.00 0.00 31.53 3.51
36 37 3.075148 CGTTAGAGAGTGAGTGGTCAGA 58.925 50.000 0.00 0.00 31.53 3.27
37 38 3.120130 CGTTAGAGAGTGAGTGGTCAGAC 60.120 52.174 0.00 0.00 31.53 3.51
38 39 2.666272 AGAGAGTGAGTGGTCAGACA 57.334 50.000 2.17 0.00 31.53 3.41
39 40 3.168035 AGAGAGTGAGTGGTCAGACAT 57.832 47.619 2.17 0.00 31.53 3.06
40 41 3.505386 AGAGAGTGAGTGGTCAGACATT 58.495 45.455 2.17 0.00 31.53 2.71
41 42 3.257873 AGAGAGTGAGTGGTCAGACATTG 59.742 47.826 2.17 0.00 31.53 2.82
42 43 2.072298 GAGTGAGTGGTCAGACATTGC 58.928 52.381 2.17 0.00 31.53 3.56
43 44 1.417517 AGTGAGTGGTCAGACATTGCA 59.582 47.619 2.17 0.00 31.53 4.08
44 45 2.158769 AGTGAGTGGTCAGACATTGCAA 60.159 45.455 0.00 0.00 31.53 4.08
45 46 2.031682 GTGAGTGGTCAGACATTGCAAC 60.032 50.000 0.00 0.00 31.53 4.17
46 47 2.221169 GAGTGGTCAGACATTGCAACA 58.779 47.619 0.00 0.00 0.00 3.33
47 48 2.816087 GAGTGGTCAGACATTGCAACAT 59.184 45.455 0.00 0.00 0.00 2.71
48 49 2.555325 AGTGGTCAGACATTGCAACATG 59.445 45.455 0.00 0.00 0.00 3.21
49 50 2.553602 GTGGTCAGACATTGCAACATGA 59.446 45.455 0.00 0.60 0.00 3.07
50 51 2.815503 TGGTCAGACATTGCAACATGAG 59.184 45.455 0.00 0.00 0.00 2.90
51 52 2.163010 GGTCAGACATTGCAACATGAGG 59.837 50.000 0.00 0.00 0.00 3.86
52 53 1.814394 TCAGACATTGCAACATGAGGC 59.186 47.619 0.00 2.69 0.00 4.70
53 54 1.542472 CAGACATTGCAACATGAGGCA 59.458 47.619 0.00 11.09 38.46 4.75
54 55 2.165641 CAGACATTGCAACATGAGGCAT 59.834 45.455 14.84 3.03 40.17 4.40
55 56 2.165641 AGACATTGCAACATGAGGCATG 59.834 45.455 14.84 15.52 46.18 4.06
70 71 6.624352 TGAGGCATGTTTCAGAAATATAGC 57.376 37.500 4.91 10.30 0.00 2.97
71 72 6.359804 TGAGGCATGTTTCAGAAATATAGCT 58.640 36.000 17.91 0.00 0.00 3.32
72 73 6.484643 TGAGGCATGTTTCAGAAATATAGCTC 59.515 38.462 17.91 14.96 0.00 4.09
73 74 5.468072 AGGCATGTTTCAGAAATATAGCTCG 59.532 40.000 17.91 5.40 0.00 5.03
74 75 5.334414 GGCATGTTTCAGAAATATAGCTCGG 60.334 44.000 17.91 4.90 0.00 4.63
75 76 5.334414 GCATGTTTCAGAAATATAGCTCGGG 60.334 44.000 4.91 0.00 0.00 5.14
76 77 5.353394 TGTTTCAGAAATATAGCTCGGGT 57.647 39.130 0.00 0.00 0.00 5.28
77 78 5.741011 TGTTTCAGAAATATAGCTCGGGTT 58.259 37.500 0.00 0.00 0.00 4.11
78 79 5.584649 TGTTTCAGAAATATAGCTCGGGTTG 59.415 40.000 0.00 0.00 0.00 3.77
79 80 3.728845 TCAGAAATATAGCTCGGGTTGC 58.271 45.455 0.00 0.00 0.00 4.17
80 81 3.133901 TCAGAAATATAGCTCGGGTTGCA 59.866 43.478 0.00 0.00 0.00 4.08
81 82 3.496130 CAGAAATATAGCTCGGGTTGCAG 59.504 47.826 0.00 0.00 0.00 4.41
82 83 3.388024 AGAAATATAGCTCGGGTTGCAGA 59.612 43.478 0.00 0.00 0.00 4.26
83 84 3.838244 AATATAGCTCGGGTTGCAGAA 57.162 42.857 0.00 0.00 0.00 3.02
84 85 3.838244 ATATAGCTCGGGTTGCAGAAA 57.162 42.857 0.00 0.00 0.00 2.52
85 86 2.489938 ATAGCTCGGGTTGCAGAAAA 57.510 45.000 0.00 0.00 0.00 2.29
86 87 1.519408 TAGCTCGGGTTGCAGAAAAC 58.481 50.000 0.00 0.00 0.00 2.43
87 88 1.082104 GCTCGGGTTGCAGAAAACG 60.082 57.895 0.00 0.00 0.00 3.60
88 89 1.782028 GCTCGGGTTGCAGAAAACGT 61.782 55.000 0.00 0.00 0.00 3.99
89 90 0.234884 CTCGGGTTGCAGAAAACGTC 59.765 55.000 0.00 0.00 0.00 4.34
90 91 1.083015 CGGGTTGCAGAAAACGTCG 60.083 57.895 0.00 0.00 0.00 5.12
91 92 1.492319 CGGGTTGCAGAAAACGTCGA 61.492 55.000 0.00 0.00 32.69 4.20
92 93 0.658897 GGGTTGCAGAAAACGTCGAA 59.341 50.000 0.00 0.00 0.00 3.71
93 94 1.333791 GGGTTGCAGAAAACGTCGAAG 60.334 52.381 0.00 0.00 0.00 3.79
94 95 1.595794 GGTTGCAGAAAACGTCGAAGA 59.404 47.619 5.05 0.00 0.00 2.87
95 96 2.031191 GGTTGCAGAAAACGTCGAAGAA 59.969 45.455 5.05 0.00 39.69 2.52
96 97 3.280775 GTTGCAGAAAACGTCGAAGAAG 58.719 45.455 5.05 0.00 39.69 2.85
97 98 1.260561 TGCAGAAAACGTCGAAGAAGC 59.739 47.619 5.05 0.56 40.38 3.86
98 99 1.718672 GCAGAAAACGTCGAAGAAGCG 60.719 52.381 5.05 0.00 40.38 4.68
99 100 1.521423 CAGAAAACGTCGAAGAAGCGT 59.479 47.619 5.05 0.00 40.38 5.07
100 101 1.785430 AGAAAACGTCGAAGAAGCGTC 59.215 47.619 5.05 0.00 40.38 5.19
101 102 0.501435 AAAACGTCGAAGAAGCGTCG 59.499 50.000 5.05 0.00 45.45 5.12
102 103 1.273455 AAACGTCGAAGAAGCGTCGG 61.273 55.000 5.05 0.00 44.57 4.79
103 104 2.874780 CGTCGAAGAAGCGTCGGG 60.875 66.667 0.00 0.00 39.69 5.14
104 105 3.179939 GTCGAAGAAGCGTCGGGC 61.180 66.667 0.00 0.00 39.69 6.13
114 115 4.052229 CGTCGGGCGTGAGAGGTT 62.052 66.667 0.00 0.00 35.54 3.50
115 116 2.432628 GTCGGGCGTGAGAGGTTG 60.433 66.667 0.00 0.00 0.00 3.77
116 117 4.373116 TCGGGCGTGAGAGGTTGC 62.373 66.667 0.00 0.00 0.00 4.17
136 137 4.776322 CCGGCGTGCTGGATTGGA 62.776 66.667 14.69 0.00 45.10 3.53
137 138 3.197790 CGGCGTGCTGGATTGGAG 61.198 66.667 0.00 0.00 0.00 3.86
138 139 3.512516 GGCGTGCTGGATTGGAGC 61.513 66.667 0.00 0.00 36.95 4.70
139 140 2.437359 GCGTGCTGGATTGGAGCT 60.437 61.111 0.00 0.00 37.35 4.09
140 141 1.153369 GCGTGCTGGATTGGAGCTA 60.153 57.895 0.00 0.00 37.35 3.32
141 142 1.156645 GCGTGCTGGATTGGAGCTAG 61.157 60.000 0.00 0.00 37.35 3.42
142 143 1.156645 CGTGCTGGATTGGAGCTAGC 61.157 60.000 6.62 6.62 39.91 3.42
143 144 0.107508 GTGCTGGATTGGAGCTAGCA 60.108 55.000 18.83 0.95 45.70 3.49
144 145 0.179702 TGCTGGATTGGAGCTAGCAG 59.820 55.000 18.83 3.65 43.54 4.24
145 146 1.165284 GCTGGATTGGAGCTAGCAGC 61.165 60.000 18.83 10.57 42.84 5.25
165 166 4.598894 CTCGCGGGGCTGAGATGG 62.599 72.222 6.13 0.00 33.54 3.51
167 168 4.598894 CGCGGGGCTGAGATGGAG 62.599 72.222 0.00 0.00 0.00 3.86
168 169 4.247380 GCGGGGCTGAGATGGAGG 62.247 72.222 0.00 0.00 0.00 4.30
169 170 2.444706 CGGGGCTGAGATGGAGGA 60.445 66.667 0.00 0.00 0.00 3.71
170 171 2.506061 CGGGGCTGAGATGGAGGAG 61.506 68.421 0.00 0.00 0.00 3.69
171 172 2.146061 GGGGCTGAGATGGAGGAGG 61.146 68.421 0.00 0.00 0.00 4.30
172 173 1.074926 GGGCTGAGATGGAGGAGGA 60.075 63.158 0.00 0.00 0.00 3.71
173 174 1.120795 GGGCTGAGATGGAGGAGGAG 61.121 65.000 0.00 0.00 0.00 3.69
174 175 1.747774 GCTGAGATGGAGGAGGAGC 59.252 63.158 0.00 0.00 0.00 4.70
175 176 1.047596 GCTGAGATGGAGGAGGAGCA 61.048 60.000 0.00 0.00 0.00 4.26
176 177 1.042229 CTGAGATGGAGGAGGAGCAG 58.958 60.000 0.00 0.00 0.00 4.24
177 178 1.047596 TGAGATGGAGGAGGAGCAGC 61.048 60.000 0.00 0.00 0.00 5.25
178 179 1.002662 AGATGGAGGAGGAGCAGCA 59.997 57.895 0.00 0.00 0.00 4.41
179 180 0.619832 AGATGGAGGAGGAGCAGCAA 60.620 55.000 0.00 0.00 0.00 3.91
180 181 0.463474 GATGGAGGAGGAGCAGCAAC 60.463 60.000 0.00 0.00 0.00 4.17
181 182 0.913451 ATGGAGGAGGAGCAGCAACT 60.913 55.000 0.00 0.00 0.00 3.16
182 183 1.220477 GGAGGAGGAGCAGCAACTC 59.780 63.158 7.62 7.62 35.86 3.01
187 188 4.704833 GGAGCAGCAACTCCGGCA 62.705 66.667 9.06 0.00 46.52 5.69
188 189 2.669569 GAGCAGCAACTCCGGCAA 60.670 61.111 0.00 0.00 0.00 4.52
189 190 2.670934 AGCAGCAACTCCGGCAAG 60.671 61.111 0.00 0.00 0.00 4.01
190 191 4.410743 GCAGCAACTCCGGCAAGC 62.411 66.667 0.00 0.00 0.00 4.01
191 192 2.979676 CAGCAACTCCGGCAAGCA 60.980 61.111 0.00 0.00 0.00 3.91
192 193 2.980233 AGCAACTCCGGCAAGCAC 60.980 61.111 0.00 0.00 0.00 4.40
193 194 4.389576 GCAACTCCGGCAAGCACG 62.390 66.667 0.00 0.00 0.00 5.34
201 202 3.064324 GGCAAGCACGGCAAGGAT 61.064 61.111 0.00 0.00 0.00 3.24
202 203 2.639327 GGCAAGCACGGCAAGGATT 61.639 57.895 0.00 0.00 0.00 3.01
203 204 1.312371 GGCAAGCACGGCAAGGATTA 61.312 55.000 0.00 0.00 0.00 1.75
204 205 0.099436 GCAAGCACGGCAAGGATTAG 59.901 55.000 0.00 0.00 0.00 1.73
205 206 1.453155 CAAGCACGGCAAGGATTAGT 58.547 50.000 0.00 0.00 0.00 2.24
206 207 1.812571 CAAGCACGGCAAGGATTAGTT 59.187 47.619 0.00 0.00 0.00 2.24
207 208 1.739067 AGCACGGCAAGGATTAGTTC 58.261 50.000 0.00 0.00 0.00 3.01
208 209 0.733150 GCACGGCAAGGATTAGTTCC 59.267 55.000 0.00 0.00 45.85 3.62
209 210 1.379527 CACGGCAAGGATTAGTTCCC 58.620 55.000 0.00 0.00 46.81 3.97
210 211 0.255033 ACGGCAAGGATTAGTTCCCC 59.745 55.000 0.00 0.00 46.81 4.81
211 212 0.546598 CGGCAAGGATTAGTTCCCCT 59.453 55.000 0.00 0.00 46.81 4.79
212 213 1.475213 CGGCAAGGATTAGTTCCCCTC 60.475 57.143 0.00 0.00 46.81 4.30
213 214 1.475213 GGCAAGGATTAGTTCCCCTCG 60.475 57.143 0.00 0.00 46.81 4.63
214 215 1.954927 CAAGGATTAGTTCCCCTCGC 58.045 55.000 0.00 0.00 46.81 5.03
215 216 0.464452 AAGGATTAGTTCCCCTCGCG 59.536 55.000 0.00 0.00 46.81 5.87
216 217 1.594564 GGATTAGTTCCCCTCGCGC 60.595 63.158 0.00 0.00 38.75 6.86
217 218 1.949631 GATTAGTTCCCCTCGCGCG 60.950 63.158 26.76 26.76 0.00 6.86
218 219 4.807039 TTAGTTCCCCTCGCGCGC 62.807 66.667 27.95 23.91 0.00 6.86
235 236 4.834892 CCGGCGGCAGCGATTTTG 62.835 66.667 15.42 0.00 46.35 2.44
238 239 4.459331 GCGGCAGCGATTTTGCGA 62.459 61.111 0.00 0.00 42.42 5.10
239 240 2.404789 CGGCAGCGATTTTGCGAT 59.595 55.556 0.00 0.00 42.42 4.58
241 242 1.587088 GGCAGCGATTTTGCGATGG 60.587 57.895 0.00 0.00 46.64 3.51
242 243 1.137404 GCAGCGATTTTGCGATGGT 59.863 52.632 0.00 0.00 46.64 3.55
243 244 1.135699 GCAGCGATTTTGCGATGGTG 61.136 55.000 0.00 0.00 46.64 4.17
244 245 0.523968 CAGCGATTTTGCGATGGTGG 60.524 55.000 0.00 0.00 43.27 4.61
245 246 1.226660 GCGATTTTGCGATGGTGGG 60.227 57.895 0.00 0.00 0.00 4.61
246 247 1.433064 CGATTTTGCGATGGTGGGG 59.567 57.895 0.00 0.00 0.00 4.96
247 248 1.815866 GATTTTGCGATGGTGGGGG 59.184 57.895 0.00 0.00 0.00 5.40
248 249 2.296814 GATTTTGCGATGGTGGGGGC 62.297 60.000 0.00 0.00 0.00 5.80
249 250 2.803593 ATTTTGCGATGGTGGGGGCT 62.804 55.000 0.00 0.00 0.00 5.19
250 251 4.738998 TTGCGATGGTGGGGGCTG 62.739 66.667 0.00 0.00 0.00 4.85
273 274 3.730761 GCGTTGGGCTCAGCTGTG 61.731 66.667 14.67 12.95 39.11 3.66
274 275 2.281070 CGTTGGGCTCAGCTGTGT 60.281 61.111 14.67 0.00 0.00 3.72
275 276 2.320587 CGTTGGGCTCAGCTGTGTC 61.321 63.158 14.67 13.19 0.00 3.67
276 277 1.227943 GTTGGGCTCAGCTGTGTCA 60.228 57.895 20.86 14.30 0.00 3.58
277 278 1.071987 TTGGGCTCAGCTGTGTCAG 59.928 57.895 20.86 9.09 34.12 3.51
278 279 2.046507 GGGCTCAGCTGTGTCAGG 60.047 66.667 20.86 4.42 31.21 3.86
279 280 2.587247 GGGCTCAGCTGTGTCAGGA 61.587 63.158 20.86 0.00 31.21 3.86
280 281 1.375268 GGCTCAGCTGTGTCAGGAC 60.375 63.158 15.19 0.00 31.21 3.85
281 282 1.735920 GCTCAGCTGTGTCAGGACG 60.736 63.158 14.67 0.00 31.21 4.79
282 283 1.080230 CTCAGCTGTGTCAGGACGG 60.080 63.158 14.67 0.00 31.21 4.79
283 284 2.740055 CAGCTGTGTCAGGACGGC 60.740 66.667 5.25 0.00 46.91 5.68
286 287 3.680786 CTGTGTCAGGACGGCGGA 61.681 66.667 13.24 0.00 0.00 5.54
287 288 3.916392 CTGTGTCAGGACGGCGGAC 62.916 68.421 13.24 9.55 0.00 4.79
288 289 3.986006 GTGTCAGGACGGCGGACA 61.986 66.667 13.24 12.34 39.09 4.02
289 290 3.228017 TGTCAGGACGGCGGACAA 61.228 61.111 13.24 0.00 38.50 3.18
290 291 2.432628 GTCAGGACGGCGGACAAG 60.433 66.667 13.24 0.57 0.00 3.16
291 292 3.691342 TCAGGACGGCGGACAAGG 61.691 66.667 13.24 0.00 0.00 3.61
292 293 3.691342 CAGGACGGCGGACAAGGA 61.691 66.667 13.24 0.00 0.00 3.36
293 294 2.920912 AGGACGGCGGACAAGGAA 60.921 61.111 13.24 0.00 0.00 3.36
294 295 2.031465 GGACGGCGGACAAGGAAA 59.969 61.111 13.24 0.00 0.00 3.13
295 296 1.376812 GGACGGCGGACAAGGAAAT 60.377 57.895 13.24 0.00 0.00 2.17
296 297 1.366854 GGACGGCGGACAAGGAAATC 61.367 60.000 13.24 0.00 0.00 2.17
297 298 0.391263 GACGGCGGACAAGGAAATCT 60.391 55.000 13.24 0.00 0.00 2.40
298 299 0.673644 ACGGCGGACAAGGAAATCTG 60.674 55.000 13.24 0.00 0.00 2.90
299 300 0.673644 CGGCGGACAAGGAAATCTGT 60.674 55.000 0.00 0.00 0.00 3.41
300 301 1.534729 GGCGGACAAGGAAATCTGTT 58.465 50.000 0.00 0.00 0.00 3.16
301 302 1.886542 GGCGGACAAGGAAATCTGTTT 59.113 47.619 0.00 0.00 0.00 2.83
302 303 2.095212 GGCGGACAAGGAAATCTGTTTC 60.095 50.000 0.00 0.00 42.39 2.78
314 315 3.904136 ATCTGTTTCCAAAAGTGAGCG 57.096 42.857 0.00 0.00 0.00 5.03
315 316 1.946768 TCTGTTTCCAAAAGTGAGCGG 59.053 47.619 0.00 0.00 0.00 5.52
316 317 1.676006 CTGTTTCCAAAAGTGAGCGGT 59.324 47.619 0.00 0.00 0.00 5.68
317 318 2.096248 TGTTTCCAAAAGTGAGCGGTT 58.904 42.857 0.00 0.00 0.00 4.44
318 319 2.159310 TGTTTCCAAAAGTGAGCGGTTG 60.159 45.455 0.00 0.00 0.00 3.77
319 320 1.757682 TTCCAAAAGTGAGCGGTTGT 58.242 45.000 0.00 0.00 0.00 3.32
320 321 1.757682 TCCAAAAGTGAGCGGTTGTT 58.242 45.000 0.00 0.00 0.00 2.83
321 322 1.403679 TCCAAAAGTGAGCGGTTGTTG 59.596 47.619 0.00 0.00 0.00 3.33
322 323 1.199624 CAAAAGTGAGCGGTTGTTGC 58.800 50.000 0.00 0.00 0.00 4.17
323 324 0.814457 AAAAGTGAGCGGTTGTTGCA 59.186 45.000 0.00 0.00 33.85 4.08
324 325 0.381801 AAAGTGAGCGGTTGTTGCAG 59.618 50.000 0.00 0.00 33.85 4.41
325 326 1.447317 AAGTGAGCGGTTGTTGCAGG 61.447 55.000 0.00 0.00 33.85 4.85
326 327 1.891919 GTGAGCGGTTGTTGCAGGA 60.892 57.895 0.00 0.00 33.85 3.86
327 328 1.153066 TGAGCGGTTGTTGCAGGAA 60.153 52.632 0.00 0.00 33.85 3.36
328 329 1.165907 TGAGCGGTTGTTGCAGGAAG 61.166 55.000 0.00 0.00 33.85 3.46
329 330 1.152963 AGCGGTTGTTGCAGGAAGT 60.153 52.632 0.00 0.00 33.85 3.01
330 331 0.107831 AGCGGTTGTTGCAGGAAGTA 59.892 50.000 0.00 0.00 33.85 2.24
331 332 0.948678 GCGGTTGTTGCAGGAAGTAA 59.051 50.000 0.00 0.00 0.00 2.24
332 333 1.069227 GCGGTTGTTGCAGGAAGTAAG 60.069 52.381 0.00 0.00 0.00 2.34
333 334 2.489971 CGGTTGTTGCAGGAAGTAAGA 58.510 47.619 0.00 0.00 0.00 2.10
334 335 2.875933 CGGTTGTTGCAGGAAGTAAGAA 59.124 45.455 0.00 0.00 0.00 2.52
335 336 3.058914 CGGTTGTTGCAGGAAGTAAGAAG 60.059 47.826 0.00 0.00 0.00 2.85
336 337 3.253432 GGTTGTTGCAGGAAGTAAGAAGG 59.747 47.826 0.00 0.00 0.00 3.46
337 338 3.857157 TGTTGCAGGAAGTAAGAAGGT 57.143 42.857 0.00 0.00 0.00 3.50
338 339 3.476552 TGTTGCAGGAAGTAAGAAGGTG 58.523 45.455 0.00 0.00 0.00 4.00
339 340 2.814336 GTTGCAGGAAGTAAGAAGGTGG 59.186 50.000 0.00 0.00 0.00 4.61
340 341 2.054799 TGCAGGAAGTAAGAAGGTGGT 58.945 47.619 0.00 0.00 0.00 4.16
341 342 2.038557 TGCAGGAAGTAAGAAGGTGGTC 59.961 50.000 0.00 0.00 0.00 4.02
342 343 2.931320 GCAGGAAGTAAGAAGGTGGTCG 60.931 54.545 0.00 0.00 0.00 4.79
343 344 1.275573 AGGAAGTAAGAAGGTGGTCGC 59.724 52.381 0.00 0.00 0.00 5.19
344 345 1.001633 GGAAGTAAGAAGGTGGTCGCA 59.998 52.381 0.00 0.00 0.00 5.10
345 346 2.067013 GAAGTAAGAAGGTGGTCGCAC 58.933 52.381 0.00 0.00 0.00 5.34
346 347 1.045407 AGTAAGAAGGTGGTCGCACA 58.955 50.000 0.00 0.00 0.00 4.57
347 348 1.623811 AGTAAGAAGGTGGTCGCACAT 59.376 47.619 0.00 0.00 0.00 3.21
348 349 1.732259 GTAAGAAGGTGGTCGCACATG 59.268 52.381 0.00 0.00 0.00 3.21
349 350 1.237285 AAGAAGGTGGTCGCACATGC 61.237 55.000 0.00 0.00 37.78 4.06
362 363 1.299541 CACATGCGGTGGTTAGATCC 58.700 55.000 0.00 0.00 44.04 3.36
363 364 0.179084 ACATGCGGTGGTTAGATCCG 60.179 55.000 0.00 0.00 45.94 4.18
364 365 0.880278 CATGCGGTGGTTAGATCCGG 60.880 60.000 0.00 0.00 43.77 5.14
365 366 2.588034 GCGGTGGTTAGATCCGGC 60.588 66.667 0.00 0.00 43.77 6.13
366 367 2.279252 CGGTGGTTAGATCCGGCG 60.279 66.667 0.00 0.00 40.49 6.46
367 368 2.108362 GGTGGTTAGATCCGGCGG 59.892 66.667 22.51 22.51 0.00 6.13
368 369 2.588034 GTGGTTAGATCCGGCGGC 60.588 66.667 23.83 8.50 0.00 6.53
369 370 2.762459 TGGTTAGATCCGGCGGCT 60.762 61.111 23.83 13.03 0.00 5.52
370 371 2.280186 GGTTAGATCCGGCGGCTG 60.280 66.667 23.83 0.65 0.00 4.85
371 372 2.499685 GTTAGATCCGGCGGCTGT 59.500 61.111 23.83 13.78 0.00 4.40
372 373 1.591863 GTTAGATCCGGCGGCTGTC 60.592 63.158 23.83 18.45 0.00 3.51
373 374 2.055633 TTAGATCCGGCGGCTGTCA 61.056 57.895 23.83 3.23 0.00 3.58
374 375 2.016393 TTAGATCCGGCGGCTGTCAG 62.016 60.000 23.83 0.00 0.00 3.51
375 376 2.904178 TAGATCCGGCGGCTGTCAGA 62.904 60.000 23.83 1.37 0.00 3.27
376 377 3.371097 GATCCGGCGGCTGTCAGAA 62.371 63.158 23.83 0.44 0.00 3.02
377 378 3.665675 ATCCGGCGGCTGTCAGAAC 62.666 63.158 23.83 0.00 0.00 3.01
389 390 3.122150 TCAGAACGCTGATCCAACG 57.878 52.632 0.00 0.00 45.88 4.10
390 391 0.389817 TCAGAACGCTGATCCAACGG 60.390 55.000 0.00 0.00 45.88 4.44
391 392 0.389817 CAGAACGCTGATCCAACGGA 60.390 55.000 4.47 0.00 45.17 4.69
392 393 0.108615 AGAACGCTGATCCAACGGAG 60.109 55.000 4.47 0.00 34.05 4.63
393 394 1.696832 GAACGCTGATCCAACGGAGC 61.697 60.000 4.47 0.00 38.78 4.70
394 395 2.172483 AACGCTGATCCAACGGAGCT 62.172 55.000 0.00 0.00 39.11 4.09
395 396 1.880340 CGCTGATCCAACGGAGCTC 60.880 63.158 4.71 4.71 39.11 4.09
396 397 1.522580 GCTGATCCAACGGAGCTCC 60.523 63.158 23.79 23.79 39.11 4.70
397 398 1.900351 CTGATCCAACGGAGCTCCA 59.100 57.895 31.67 13.03 39.11 3.86
398 399 0.467384 CTGATCCAACGGAGCTCCAT 59.533 55.000 31.67 15.92 39.11 3.41
399 400 0.178767 TGATCCAACGGAGCTCCATG 59.821 55.000 31.67 26.71 39.11 3.66
400 401 0.179000 GATCCAACGGAGCTCCATGT 59.821 55.000 31.67 19.66 34.95 3.21
401 402 0.107508 ATCCAACGGAGCTCCATGTG 60.108 55.000 31.67 23.38 34.05 3.21
402 403 1.746615 CCAACGGAGCTCCATGTGG 60.747 63.158 31.67 27.59 35.14 4.17
403 404 2.045926 AACGGAGCTCCATGTGGC 60.046 61.111 31.67 3.61 35.14 5.01
404 405 3.958147 AACGGAGCTCCATGTGGCG 62.958 63.158 31.67 17.89 35.14 5.69
406 407 3.785859 GGAGCTCCATGTGGCGGA 61.786 66.667 28.43 0.00 35.64 5.54
407 408 2.507944 GAGCTCCATGTGGCGGAT 59.492 61.111 0.87 0.00 34.44 4.18
408 409 1.890979 GAGCTCCATGTGGCGGATG 60.891 63.158 0.87 0.00 34.44 3.51
409 410 2.124570 GCTCCATGTGGCGGATGT 60.125 61.111 0.00 0.00 34.44 3.06
410 411 1.750399 GCTCCATGTGGCGGATGTT 60.750 57.895 0.00 0.00 34.44 2.71
411 412 1.315257 GCTCCATGTGGCGGATGTTT 61.315 55.000 0.00 0.00 34.44 2.83
412 413 0.734889 CTCCATGTGGCGGATGTTTC 59.265 55.000 0.00 0.00 34.44 2.78
413 414 0.327924 TCCATGTGGCGGATGTTTCT 59.672 50.000 0.00 0.00 34.44 2.52
414 415 1.557371 TCCATGTGGCGGATGTTTCTA 59.443 47.619 0.00 0.00 34.44 2.10
415 416 2.026729 TCCATGTGGCGGATGTTTCTAA 60.027 45.455 0.00 0.00 34.44 2.10
416 417 2.951642 CCATGTGGCGGATGTTTCTAAT 59.048 45.455 0.00 0.00 0.00 1.73
417 418 4.133820 CCATGTGGCGGATGTTTCTAATA 58.866 43.478 0.00 0.00 0.00 0.98
418 419 4.024048 CCATGTGGCGGATGTTTCTAATAC 60.024 45.833 0.00 0.00 0.00 1.89
419 420 4.209307 TGTGGCGGATGTTTCTAATACA 57.791 40.909 0.00 0.00 0.00 2.29
420 421 3.936453 TGTGGCGGATGTTTCTAATACAC 59.064 43.478 0.00 0.00 0.00 2.90
421 422 4.189231 GTGGCGGATGTTTCTAATACACT 58.811 43.478 0.00 0.00 0.00 3.55
422 423 4.270325 GTGGCGGATGTTTCTAATACACTC 59.730 45.833 0.00 0.00 0.00 3.51
423 424 3.489785 GGCGGATGTTTCTAATACACTCG 59.510 47.826 0.00 0.00 0.00 4.18
424 425 4.110482 GCGGATGTTTCTAATACACTCGT 58.890 43.478 0.00 0.00 31.40 4.18
425 426 4.206609 GCGGATGTTTCTAATACACTCGTC 59.793 45.833 0.00 0.00 31.40 4.20
426 427 4.436847 CGGATGTTTCTAATACACTCGTCG 59.563 45.833 0.00 0.00 0.00 5.12
427 428 4.738740 GGATGTTTCTAATACACTCGTCGG 59.261 45.833 0.00 0.00 0.00 4.79
428 429 4.771590 TGTTTCTAATACACTCGTCGGT 57.228 40.909 0.00 0.00 0.00 4.69
429 430 4.478699 TGTTTCTAATACACTCGTCGGTG 58.521 43.478 10.96 10.96 42.34 4.94
430 431 3.770263 TTCTAATACACTCGTCGGTGG 57.230 47.619 15.29 0.41 41.09 4.61
431 432 2.989909 TCTAATACACTCGTCGGTGGA 58.010 47.619 15.29 9.29 41.09 4.02
432 433 2.679837 TCTAATACACTCGTCGGTGGAC 59.320 50.000 15.29 0.00 41.09 4.02
440 441 2.050168 GTCGGTGGACGCGTAACA 60.050 61.111 13.97 12.50 43.86 2.41
441 442 1.661197 GTCGGTGGACGCGTAACAA 60.661 57.895 13.97 3.22 43.86 2.83
442 443 1.661197 TCGGTGGACGCGTAACAAC 60.661 57.895 13.97 16.84 43.86 3.32
443 444 1.662446 CGGTGGACGCGTAACAACT 60.662 57.895 23.52 0.00 34.82 3.16
444 445 0.387112 CGGTGGACGCGTAACAACTA 60.387 55.000 23.52 3.61 34.82 2.24
445 446 1.343506 GGTGGACGCGTAACAACTAG 58.656 55.000 20.40 0.00 0.00 2.57
446 447 0.712222 GTGGACGCGTAACAACTAGC 59.288 55.000 13.97 0.00 0.00 3.42
450 451 2.427360 CGCGTAACAACTAGCGTGT 58.573 52.632 0.00 0.00 46.48 4.49
451 452 0.780002 CGCGTAACAACTAGCGTGTT 59.220 50.000 14.77 14.77 46.48 3.32
462 463 4.912173 GCGTGTTGCAATTCGTGA 57.088 50.000 20.89 0.00 45.45 4.35
463 464 2.409835 GCGTGTTGCAATTCGTGAC 58.590 52.632 20.89 2.40 45.45 3.67
464 465 1.320382 GCGTGTTGCAATTCGTGACG 61.320 55.000 20.89 0.00 45.45 4.35
465 466 1.320382 CGTGTTGCAATTCGTGACGC 61.320 55.000 0.59 0.00 0.00 5.19
466 467 0.041312 GTGTTGCAATTCGTGACGCT 60.041 50.000 0.59 0.00 0.00 5.07
467 468 0.234625 TGTTGCAATTCGTGACGCTC 59.765 50.000 0.59 0.00 0.00 5.03
468 469 0.234625 GTTGCAATTCGTGACGCTCA 59.765 50.000 0.59 0.00 0.00 4.26
469 470 0.234625 TTGCAATTCGTGACGCTCAC 59.765 50.000 0.00 7.74 43.65 3.51
480 481 4.094684 CGCTCACGTGGGAAGATC 57.905 61.111 22.35 0.00 33.53 2.75
481 482 1.513158 CGCTCACGTGGGAAGATCT 59.487 57.895 22.35 0.00 33.53 2.75
482 483 0.738975 CGCTCACGTGGGAAGATCTA 59.261 55.000 22.35 0.00 33.53 1.98
483 484 1.134367 CGCTCACGTGGGAAGATCTAA 59.866 52.381 22.35 0.00 33.53 2.10
484 485 2.541556 GCTCACGTGGGAAGATCTAAC 58.458 52.381 22.35 0.00 0.00 2.34
485 486 2.798680 CTCACGTGGGAAGATCTAACG 58.201 52.381 10.82 14.83 40.00 3.18
486 487 1.475280 TCACGTGGGAAGATCTAACGG 59.525 52.381 17.00 10.98 38.52 4.44
487 488 0.175073 ACGTGGGAAGATCTAACGGC 59.825 55.000 18.50 2.18 38.52 5.68
488 489 0.174845 CGTGGGAAGATCTAACGGCA 59.825 55.000 0.00 0.00 0.00 5.69
489 490 1.202533 CGTGGGAAGATCTAACGGCAT 60.203 52.381 0.00 0.00 0.00 4.40
490 491 2.213499 GTGGGAAGATCTAACGGCATG 58.787 52.381 0.00 0.00 0.00 4.06
491 492 2.115427 TGGGAAGATCTAACGGCATGA 58.885 47.619 0.00 0.00 0.00 3.07
492 493 2.103094 TGGGAAGATCTAACGGCATGAG 59.897 50.000 0.00 0.00 0.00 2.90
493 494 2.365617 GGGAAGATCTAACGGCATGAGA 59.634 50.000 0.00 0.00 0.00 3.27
494 495 3.553922 GGGAAGATCTAACGGCATGAGAG 60.554 52.174 0.00 0.00 0.00 3.20
495 496 3.553922 GGAAGATCTAACGGCATGAGAGG 60.554 52.174 0.00 0.00 0.00 3.69
496 497 2.672098 AGATCTAACGGCATGAGAGGT 58.328 47.619 0.00 0.00 0.00 3.85
497 498 2.363680 AGATCTAACGGCATGAGAGGTG 59.636 50.000 0.00 0.00 0.00 4.00
498 499 0.824109 TCTAACGGCATGAGAGGTGG 59.176 55.000 0.00 0.00 0.00 4.61
499 500 0.537188 CTAACGGCATGAGAGGTGGT 59.463 55.000 0.00 0.00 0.00 4.16
500 501 0.535335 TAACGGCATGAGAGGTGGTC 59.465 55.000 0.00 0.00 0.00 4.02
501 502 2.202797 CGGCATGAGAGGTGGTCG 60.203 66.667 0.00 0.00 0.00 4.79
502 503 2.710902 CGGCATGAGAGGTGGTCGA 61.711 63.158 0.00 0.00 0.00 4.20
503 504 1.826024 GGCATGAGAGGTGGTCGAT 59.174 57.895 0.00 0.00 0.00 3.59
504 505 0.249657 GGCATGAGAGGTGGTCGATC 60.250 60.000 0.00 0.00 0.00 3.69
505 506 0.749649 GCATGAGAGGTGGTCGATCT 59.250 55.000 0.00 0.00 0.00 2.75
506 507 1.137872 GCATGAGAGGTGGTCGATCTT 59.862 52.381 0.00 0.00 0.00 2.40
507 508 2.419297 GCATGAGAGGTGGTCGATCTTT 60.419 50.000 0.00 0.00 0.00 2.52
508 509 3.452474 CATGAGAGGTGGTCGATCTTTC 58.548 50.000 0.00 0.00 0.00 2.62
509 510 1.825474 TGAGAGGTGGTCGATCTTTCC 59.175 52.381 0.00 0.00 0.00 3.13
510 511 1.137282 GAGAGGTGGTCGATCTTTCCC 59.863 57.143 0.00 0.00 0.00 3.97
511 512 0.179108 GAGGTGGTCGATCTTTCCCG 60.179 60.000 0.00 0.00 0.00 5.14
512 513 0.613853 AGGTGGTCGATCTTTCCCGA 60.614 55.000 0.00 0.00 0.00 5.14
513 514 0.248289 GGTGGTCGATCTTTCCCGAA 59.752 55.000 0.00 0.00 36.50 4.30
514 515 1.356938 GTGGTCGATCTTTCCCGAAC 58.643 55.000 0.00 0.00 42.32 3.95
515 516 1.067071 GTGGTCGATCTTTCCCGAACT 60.067 52.381 0.00 0.00 42.45 3.01
516 517 1.621814 TGGTCGATCTTTCCCGAACTT 59.378 47.619 0.00 0.00 42.45 2.66
517 518 2.269172 GGTCGATCTTTCCCGAACTTC 58.731 52.381 0.00 0.00 39.23 3.01
518 519 2.353406 GGTCGATCTTTCCCGAACTTCA 60.353 50.000 0.00 0.00 39.23 3.02
519 520 3.323243 GTCGATCTTTCCCGAACTTCAA 58.677 45.455 0.00 0.00 36.50 2.69
520 521 3.933332 GTCGATCTTTCCCGAACTTCAAT 59.067 43.478 0.00 0.00 36.50 2.57
521 522 4.392138 GTCGATCTTTCCCGAACTTCAATT 59.608 41.667 0.00 0.00 36.50 2.32
522 523 4.391830 TCGATCTTTCCCGAACTTCAATTG 59.608 41.667 0.00 0.00 0.00 2.32
523 524 4.437390 CGATCTTTCCCGAACTTCAATTGG 60.437 45.833 5.42 0.00 0.00 3.16
524 525 2.556622 TCTTTCCCGAACTTCAATTGGC 59.443 45.455 5.42 0.00 0.00 4.52
525 526 0.878416 TTCCCGAACTTCAATTGGCG 59.122 50.000 5.42 0.00 0.00 5.69
526 527 0.250553 TCCCGAACTTCAATTGGCGT 60.251 50.000 5.42 0.06 0.00 5.68
527 528 0.109781 CCCGAACTTCAATTGGCGTG 60.110 55.000 5.42 0.00 0.00 5.34
528 529 0.591170 CCGAACTTCAATTGGCGTGT 59.409 50.000 5.42 0.00 0.00 4.49
529 530 1.001815 CCGAACTTCAATTGGCGTGTT 60.002 47.619 5.42 5.89 0.00 3.32
530 531 2.043411 CGAACTTCAATTGGCGTGTTG 58.957 47.619 5.42 0.00 0.00 3.33
531 532 2.540769 CGAACTTCAATTGGCGTGTTGT 60.541 45.455 5.42 0.00 0.00 3.32
532 533 2.490328 ACTTCAATTGGCGTGTTGTG 57.510 45.000 5.42 0.00 0.00 3.33
533 534 1.130955 CTTCAATTGGCGTGTTGTGC 58.869 50.000 5.42 0.00 0.00 4.57
534 535 0.743688 TTCAATTGGCGTGTTGTGCT 59.256 45.000 5.42 0.00 0.00 4.40
540 541 3.444703 TTGGCGTGTTGTGCTTTTTAT 57.555 38.095 0.00 0.00 0.00 1.40
545 546 3.364621 GCGTGTTGTGCTTTTTATGATGG 59.635 43.478 0.00 0.00 0.00 3.51
553 554 4.567959 GTGCTTTTTATGATGGTTGATGCC 59.432 41.667 0.00 0.00 0.00 4.40
630 631 7.921041 TTGGATATCTTACCTGAATGAGAGT 57.079 36.000 2.05 0.00 0.00 3.24
673 674 4.917415 CGGTGAAAATTGTGATCCAAGTTC 59.083 41.667 9.13 10.68 40.24 3.01
688 689 8.260818 TGATCCAAGTTCAAAATAAAAACACCA 58.739 29.630 0.00 0.00 0.00 4.17
705 706 9.908152 AAAAACACCATAACTAAATGTAAGAGC 57.092 29.630 0.00 0.00 0.00 4.09
708 709 7.048512 ACACCATAACTAAATGTAAGAGCTCC 58.951 38.462 10.93 0.00 0.00 4.70
709 710 7.047891 CACCATAACTAAATGTAAGAGCTCCA 58.952 38.462 10.93 1.22 0.00 3.86
710 711 7.552687 CACCATAACTAAATGTAAGAGCTCCAA 59.447 37.037 10.93 0.00 0.00 3.53
711 712 8.107095 ACCATAACTAAATGTAAGAGCTCCAAA 58.893 33.333 10.93 0.00 0.00 3.28
712 713 8.956426 CCATAACTAAATGTAAGAGCTCCAAAA 58.044 33.333 10.93 0.00 0.00 2.44
763 764 2.551270 CAGGCTTGACGCGTGTTC 59.449 61.111 20.70 1.97 46.52 3.18
764 765 2.108157 AGGCTTGACGCGTGTTCA 59.892 55.556 20.70 5.53 40.44 3.18
808 809 1.729470 CTGTCGAGCTAGGCACCGAT 61.729 60.000 0.00 0.00 37.91 4.18
831 832 1.153208 CAGGCTTCCAGGCAGCTAG 60.153 63.158 11.24 0.16 44.19 3.42
937 939 1.154225 CCAGCACGGACGCAATTTC 60.154 57.895 0.00 0.00 36.56 2.17
957 959 1.086634 GCAGATCGCACAGACCTTCC 61.087 60.000 4.93 0.00 41.79 3.46
970 972 1.936547 GACCTTCCTCATTCATCACGC 59.063 52.381 0.00 0.00 0.00 5.34
1008 1010 3.539791 CCAATTCCCATGGCGGCC 61.540 66.667 13.32 13.32 0.00 6.13
1231 1233 3.470888 ATCGCCTCCCACTTCCCG 61.471 66.667 0.00 0.00 0.00 5.14
1378 1380 5.136105 AGCTGAACTCCATAATTGGGAATC 58.864 41.667 2.75 4.95 43.81 2.52
1537 1539 2.655474 GCTATGCCGTACTTTCGTATCG 59.345 50.000 0.00 0.00 0.00 2.92
1560 1562 2.280628 GATTTTGCGTTCCTCGGAGAT 58.719 47.619 6.58 0.00 41.49 2.75
1615 1617 1.745489 GCCATCCACCTCACCGAAC 60.745 63.158 0.00 0.00 0.00 3.95
1759 1761 3.615937 CAGTGAGGATGAAGATGACAACG 59.384 47.826 0.00 0.00 0.00 4.10
1934 1936 1.080705 GACACCTCGTTGAGTCCCG 60.081 63.158 0.00 0.00 0.00 5.14
2208 2210 7.404980 ACAGGGATTATTAGAACTTTAGGACCA 59.595 37.037 0.00 0.00 0.00 4.02
2371 2374 3.699538 ACCTGCGACATCATTAGTCACTA 59.300 43.478 0.00 0.00 35.77 2.74
2642 2645 8.402472 CAAAATATTAAGTGCTCCGGACAAATA 58.598 33.333 0.00 6.15 0.00 1.40
2649 2652 5.542779 AGTGCTCCGGACAAATATTCTATC 58.457 41.667 0.00 0.00 0.00 2.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 2.202756 CACTCTCTAACGCCGGGC 60.203 66.667 9.54 9.54 0.00 6.13
10 11 1.313812 ACTCACTCTCTAACGCCGGG 61.314 60.000 2.18 0.00 0.00 5.73
11 12 0.179161 CACTCACTCTCTAACGCCGG 60.179 60.000 0.00 0.00 0.00 6.13
12 13 0.179161 CCACTCACTCTCTAACGCCG 60.179 60.000 0.00 0.00 0.00 6.46
13 14 0.889306 ACCACTCACTCTCTAACGCC 59.111 55.000 0.00 0.00 0.00 5.68
14 15 1.540267 TGACCACTCACTCTCTAACGC 59.460 52.381 0.00 0.00 0.00 4.84
15 16 3.075148 TCTGACCACTCACTCTCTAACG 58.925 50.000 0.00 0.00 0.00 3.18
16 17 3.821600 TGTCTGACCACTCACTCTCTAAC 59.178 47.826 5.17 0.00 0.00 2.34
17 18 4.100279 TGTCTGACCACTCACTCTCTAA 57.900 45.455 5.17 0.00 0.00 2.10
18 19 3.790089 TGTCTGACCACTCACTCTCTA 57.210 47.619 5.17 0.00 0.00 2.43
19 20 2.666272 TGTCTGACCACTCACTCTCT 57.334 50.000 5.17 0.00 0.00 3.10
20 21 3.583806 CAATGTCTGACCACTCACTCTC 58.416 50.000 5.17 0.00 0.00 3.20
21 22 2.289320 GCAATGTCTGACCACTCACTCT 60.289 50.000 5.17 0.00 0.00 3.24
22 23 2.072298 GCAATGTCTGACCACTCACTC 58.928 52.381 5.17 0.00 0.00 3.51
23 24 1.417517 TGCAATGTCTGACCACTCACT 59.582 47.619 5.17 0.00 0.00 3.41
24 25 1.882912 TGCAATGTCTGACCACTCAC 58.117 50.000 5.17 0.00 0.00 3.51
25 26 2.221169 GTTGCAATGTCTGACCACTCA 58.779 47.619 0.59 0.00 0.00 3.41
26 27 2.221169 TGTTGCAATGTCTGACCACTC 58.779 47.619 0.59 0.00 0.00 3.51
27 28 2.346766 TGTTGCAATGTCTGACCACT 57.653 45.000 0.59 0.00 0.00 4.00
28 29 2.553602 TCATGTTGCAATGTCTGACCAC 59.446 45.455 0.59 0.00 0.00 4.16
29 30 2.815503 CTCATGTTGCAATGTCTGACCA 59.184 45.455 0.59 0.00 0.00 4.02
30 31 2.163010 CCTCATGTTGCAATGTCTGACC 59.837 50.000 0.59 0.00 0.00 4.02
31 32 2.415090 GCCTCATGTTGCAATGTCTGAC 60.415 50.000 0.59 0.00 0.00 3.51
32 33 1.814394 GCCTCATGTTGCAATGTCTGA 59.186 47.619 0.59 2.89 0.00 3.27
33 34 1.542472 TGCCTCATGTTGCAATGTCTG 59.458 47.619 0.59 0.00 33.87 3.51
34 35 1.913778 TGCCTCATGTTGCAATGTCT 58.086 45.000 0.59 0.00 33.87 3.41
35 36 2.536365 CATGCCTCATGTTGCAATGTC 58.464 47.619 14.17 0.00 41.50 3.06
36 37 2.665649 CATGCCTCATGTTGCAATGT 57.334 45.000 14.17 0.00 41.50 2.71
45 46 7.040617 AGCTATATTTCTGAAACATGCCTCATG 60.041 37.037 4.73 5.35 46.18 3.07
46 47 7.002879 AGCTATATTTCTGAAACATGCCTCAT 58.997 34.615 4.73 0.00 0.00 2.90
47 48 6.359804 AGCTATATTTCTGAAACATGCCTCA 58.640 36.000 4.73 0.00 0.00 3.86
48 49 6.347240 CGAGCTATATTTCTGAAACATGCCTC 60.347 42.308 4.73 8.53 0.00 4.70
49 50 5.468072 CGAGCTATATTTCTGAAACATGCCT 59.532 40.000 4.73 0.69 0.00 4.75
50 51 5.334414 CCGAGCTATATTTCTGAAACATGCC 60.334 44.000 4.73 0.00 0.00 4.40
51 52 5.334414 CCCGAGCTATATTTCTGAAACATGC 60.334 44.000 4.73 6.39 0.00 4.06
52 53 5.760253 ACCCGAGCTATATTTCTGAAACATG 59.240 40.000 4.73 0.00 0.00 3.21
53 54 5.930135 ACCCGAGCTATATTTCTGAAACAT 58.070 37.500 4.73 1.74 0.00 2.71
54 55 5.353394 ACCCGAGCTATATTTCTGAAACA 57.647 39.130 4.73 0.00 0.00 2.83
55 56 5.504173 GCAACCCGAGCTATATTTCTGAAAC 60.504 44.000 4.73 0.00 0.00 2.78
56 57 4.574828 GCAACCCGAGCTATATTTCTGAAA 59.425 41.667 5.15 5.15 0.00 2.69
57 58 4.127171 GCAACCCGAGCTATATTTCTGAA 58.873 43.478 0.00 0.00 0.00 3.02
58 59 3.133901 TGCAACCCGAGCTATATTTCTGA 59.866 43.478 0.00 0.00 0.00 3.27
59 60 3.466836 TGCAACCCGAGCTATATTTCTG 58.533 45.455 0.00 0.00 0.00 3.02
60 61 3.388024 TCTGCAACCCGAGCTATATTTCT 59.612 43.478 0.00 0.00 0.00 2.52
61 62 3.728845 TCTGCAACCCGAGCTATATTTC 58.271 45.455 0.00 0.00 0.00 2.17
62 63 3.838244 TCTGCAACCCGAGCTATATTT 57.162 42.857 0.00 0.00 0.00 1.40
63 64 3.838244 TTCTGCAACCCGAGCTATATT 57.162 42.857 0.00 0.00 0.00 1.28
64 65 3.838244 TTTCTGCAACCCGAGCTATAT 57.162 42.857 0.00 0.00 0.00 0.86
65 66 3.267483 GTTTTCTGCAACCCGAGCTATA 58.733 45.455 0.00 0.00 0.00 1.31
66 67 2.084546 GTTTTCTGCAACCCGAGCTAT 58.915 47.619 0.00 0.00 0.00 2.97
67 68 1.519408 GTTTTCTGCAACCCGAGCTA 58.481 50.000 0.00 0.00 0.00 3.32
68 69 1.507141 CGTTTTCTGCAACCCGAGCT 61.507 55.000 0.00 0.00 0.00 4.09
69 70 1.082104 CGTTTTCTGCAACCCGAGC 60.082 57.895 0.00 0.00 0.00 5.03
70 71 0.234884 GACGTTTTCTGCAACCCGAG 59.765 55.000 0.00 0.00 0.00 4.63
71 72 1.492319 CGACGTTTTCTGCAACCCGA 61.492 55.000 0.00 0.00 0.00 5.14
72 73 1.083015 CGACGTTTTCTGCAACCCG 60.083 57.895 0.00 0.00 0.00 5.28
73 74 0.658897 TTCGACGTTTTCTGCAACCC 59.341 50.000 0.00 0.00 0.00 4.11
74 75 1.595794 TCTTCGACGTTTTCTGCAACC 59.404 47.619 0.00 0.00 0.00 3.77
75 76 3.280775 CTTCTTCGACGTTTTCTGCAAC 58.719 45.455 0.00 0.00 0.00 4.17
76 77 2.286184 GCTTCTTCGACGTTTTCTGCAA 60.286 45.455 0.00 0.00 0.00 4.08
77 78 1.260561 GCTTCTTCGACGTTTTCTGCA 59.739 47.619 0.00 0.00 0.00 4.41
78 79 1.718672 CGCTTCTTCGACGTTTTCTGC 60.719 52.381 0.00 0.00 0.00 4.26
79 80 1.521423 ACGCTTCTTCGACGTTTTCTG 59.479 47.619 0.00 0.00 36.46 3.02
80 81 1.785430 GACGCTTCTTCGACGTTTTCT 59.215 47.619 0.00 0.00 40.69 2.52
81 82 1.458188 CGACGCTTCTTCGACGTTTTC 60.458 52.381 0.00 0.00 40.69 2.29
82 83 0.501435 CGACGCTTCTTCGACGTTTT 59.499 50.000 0.00 0.00 40.69 2.43
83 84 1.273455 CCGACGCTTCTTCGACGTTT 61.273 55.000 0.00 0.00 43.58 3.60
84 85 1.728426 CCGACGCTTCTTCGACGTT 60.728 57.895 0.00 0.00 43.58 3.99
85 86 2.126965 CCGACGCTTCTTCGACGT 60.127 61.111 0.00 0.00 43.58 4.34
86 87 2.874780 CCCGACGCTTCTTCGACG 60.875 66.667 0.00 1.63 44.38 5.12
87 88 3.179939 GCCCGACGCTTCTTCGAC 61.180 66.667 0.00 0.00 38.85 4.20
88 89 4.771356 CGCCCGACGCTTCTTCGA 62.771 66.667 0.00 0.00 38.85 3.71
98 99 2.432628 CAACCTCTCACGCCCGAC 60.433 66.667 0.00 0.00 0.00 4.79
99 100 4.373116 GCAACCTCTCACGCCCGA 62.373 66.667 0.00 0.00 0.00 5.14
119 120 4.776322 TCCAATCCAGCACGCCGG 62.776 66.667 0.00 0.00 0.00 6.13
120 121 3.197790 CTCCAATCCAGCACGCCG 61.198 66.667 0.00 0.00 0.00 6.46
121 122 2.593468 TAGCTCCAATCCAGCACGCC 62.593 60.000 0.00 0.00 39.56 5.68
122 123 1.153369 TAGCTCCAATCCAGCACGC 60.153 57.895 0.00 0.00 39.56 5.34
123 124 1.156645 GCTAGCTCCAATCCAGCACG 61.157 60.000 7.70 0.00 39.56 5.34
124 125 0.107508 TGCTAGCTCCAATCCAGCAC 60.108 55.000 17.23 0.00 39.56 4.40
125 126 0.179702 CTGCTAGCTCCAATCCAGCA 59.820 55.000 17.23 5.07 39.56 4.41
126 127 1.165284 GCTGCTAGCTCCAATCCAGC 61.165 60.000 17.23 9.93 38.45 4.85
127 128 3.003740 GCTGCTAGCTCCAATCCAG 57.996 57.895 17.23 3.05 38.45 3.86
148 149 4.598894 CCATCTCAGCCCCGCGAG 62.599 72.222 8.23 0.00 33.22 5.03
150 151 4.598894 CTCCATCTCAGCCCCGCG 62.599 72.222 0.00 0.00 0.00 6.46
151 152 4.247380 CCTCCATCTCAGCCCCGC 62.247 72.222 0.00 0.00 0.00 6.13
152 153 2.444706 TCCTCCATCTCAGCCCCG 60.445 66.667 0.00 0.00 0.00 5.73
153 154 2.146061 CCTCCTCCATCTCAGCCCC 61.146 68.421 0.00 0.00 0.00 5.80
154 155 1.074926 TCCTCCTCCATCTCAGCCC 60.075 63.158 0.00 0.00 0.00 5.19
155 156 1.757423 GCTCCTCCTCCATCTCAGCC 61.757 65.000 0.00 0.00 0.00 4.85
156 157 1.047596 TGCTCCTCCTCCATCTCAGC 61.048 60.000 0.00 0.00 0.00 4.26
157 158 1.042229 CTGCTCCTCCTCCATCTCAG 58.958 60.000 0.00 0.00 0.00 3.35
158 159 1.047596 GCTGCTCCTCCTCCATCTCA 61.048 60.000 0.00 0.00 0.00 3.27
159 160 1.047596 TGCTGCTCCTCCTCCATCTC 61.048 60.000 0.00 0.00 0.00 2.75
160 161 0.619832 TTGCTGCTCCTCCTCCATCT 60.620 55.000 0.00 0.00 0.00 2.90
161 162 0.463474 GTTGCTGCTCCTCCTCCATC 60.463 60.000 0.00 0.00 0.00 3.51
162 163 0.913451 AGTTGCTGCTCCTCCTCCAT 60.913 55.000 0.00 0.00 0.00 3.41
163 164 1.537397 AGTTGCTGCTCCTCCTCCA 60.537 57.895 0.00 0.00 0.00 3.86
164 165 1.220477 GAGTTGCTGCTCCTCCTCC 59.780 63.158 0.00 0.00 0.00 4.30
165 166 4.930592 GAGTTGCTGCTCCTCCTC 57.069 61.111 0.00 0.00 0.00 3.71
171 172 2.669569 TTGCCGGAGTTGCTGCTC 60.670 61.111 5.05 0.40 34.89 4.26
172 173 2.670934 CTTGCCGGAGTTGCTGCT 60.671 61.111 5.05 0.00 0.00 4.24
173 174 4.410743 GCTTGCCGGAGTTGCTGC 62.411 66.667 5.05 0.00 0.00 5.25
174 175 2.979676 TGCTTGCCGGAGTTGCTG 60.980 61.111 5.05 0.00 0.00 4.41
175 176 2.980233 GTGCTTGCCGGAGTTGCT 60.980 61.111 5.05 0.00 0.00 3.91
176 177 4.389576 CGTGCTTGCCGGAGTTGC 62.390 66.667 5.05 3.62 0.00 4.17
184 185 1.312371 TAATCCTTGCCGTGCTTGCC 61.312 55.000 0.00 0.00 0.00 4.52
185 186 0.099436 CTAATCCTTGCCGTGCTTGC 59.901 55.000 0.00 0.00 0.00 4.01
186 187 1.453155 ACTAATCCTTGCCGTGCTTG 58.547 50.000 0.00 0.00 0.00 4.01
187 188 2.084546 GAACTAATCCTTGCCGTGCTT 58.915 47.619 0.00 0.00 0.00 3.91
188 189 1.679032 GGAACTAATCCTTGCCGTGCT 60.679 52.381 0.00 0.00 45.56 4.40
189 190 0.733150 GGAACTAATCCTTGCCGTGC 59.267 55.000 0.00 0.00 45.56 5.34
199 200 1.949631 CGCGCGAGGGGAACTAATC 60.950 63.158 28.94 0.00 40.85 1.75
200 201 2.106332 CGCGCGAGGGGAACTAAT 59.894 61.111 28.94 0.00 40.85 1.73
201 202 4.807039 GCGCGCGAGGGGAACTAA 62.807 66.667 37.18 0.00 45.27 2.24
218 219 4.834892 CAAAATCGCTGCCGCCGG 62.835 66.667 0.00 0.00 0.00 6.13
221 222 3.739782 ATCGCAAAATCGCTGCCGC 62.740 57.895 0.00 0.00 36.40 6.53
222 223 1.935917 CATCGCAAAATCGCTGCCG 60.936 57.895 0.00 0.00 36.40 5.69
223 224 1.587088 CCATCGCAAAATCGCTGCC 60.587 57.895 0.00 0.00 36.40 4.85
224 225 1.135699 CACCATCGCAAAATCGCTGC 61.136 55.000 0.00 0.00 36.41 5.25
225 226 0.523968 CCACCATCGCAAAATCGCTG 60.524 55.000 0.00 0.00 0.00 5.18
226 227 1.656818 CCCACCATCGCAAAATCGCT 61.657 55.000 0.00 0.00 0.00 4.93
227 228 1.226660 CCCACCATCGCAAAATCGC 60.227 57.895 0.00 0.00 0.00 4.58
228 229 1.433064 CCCCACCATCGCAAAATCG 59.567 57.895 0.00 0.00 0.00 3.34
229 230 1.815866 CCCCCACCATCGCAAAATC 59.184 57.895 0.00 0.00 0.00 2.17
230 231 2.358372 GCCCCCACCATCGCAAAAT 61.358 57.895 0.00 0.00 0.00 1.82
231 232 2.994417 GCCCCCACCATCGCAAAA 60.994 61.111 0.00 0.00 0.00 2.44
232 233 3.978193 AGCCCCCACCATCGCAAA 61.978 61.111 0.00 0.00 0.00 3.68
233 234 4.738998 CAGCCCCCACCATCGCAA 62.739 66.667 0.00 0.00 0.00 4.85
256 257 3.730761 CACAGCTGAGCCCAACGC 61.731 66.667 23.35 0.00 37.98 4.84
257 258 2.281070 ACACAGCTGAGCCCAACG 60.281 61.111 23.35 0.44 0.00 4.10
258 259 1.227943 TGACACAGCTGAGCCCAAC 60.228 57.895 23.35 4.94 0.00 3.77
259 260 1.071987 CTGACACAGCTGAGCCCAA 59.928 57.895 23.35 0.00 0.00 4.12
260 261 2.745698 CTGACACAGCTGAGCCCA 59.254 61.111 23.35 13.16 0.00 5.36
261 262 2.046507 CCTGACACAGCTGAGCCC 60.047 66.667 23.35 8.92 0.00 5.19
262 263 1.375268 GTCCTGACACAGCTGAGCC 60.375 63.158 23.35 5.42 0.00 4.70
263 264 1.735920 CGTCCTGACACAGCTGAGC 60.736 63.158 23.35 9.57 0.00 4.26
264 265 1.080230 CCGTCCTGACACAGCTGAG 60.080 63.158 23.35 16.23 0.00 3.35
265 266 3.051210 CCGTCCTGACACAGCTGA 58.949 61.111 23.35 0.00 0.00 4.26
266 267 2.740055 GCCGTCCTGACACAGCTG 60.740 66.667 13.48 13.48 0.00 4.24
267 268 4.363990 CGCCGTCCTGACACAGCT 62.364 66.667 0.00 0.00 0.00 4.24
269 270 3.680786 TCCGCCGTCCTGACACAG 61.681 66.667 0.00 0.00 0.00 3.66
270 271 3.986006 GTCCGCCGTCCTGACACA 61.986 66.667 0.00 0.00 0.00 3.72
271 272 3.509137 TTGTCCGCCGTCCTGACAC 62.509 63.158 0.00 0.00 38.64 3.67
272 273 3.220999 CTTGTCCGCCGTCCTGACA 62.221 63.158 0.00 0.00 37.24 3.58
273 274 2.432628 CTTGTCCGCCGTCCTGAC 60.433 66.667 0.00 0.00 0.00 3.51
274 275 3.691342 CCTTGTCCGCCGTCCTGA 61.691 66.667 0.00 0.00 0.00 3.86
275 276 2.725203 TTTCCTTGTCCGCCGTCCTG 62.725 60.000 0.00 0.00 0.00 3.86
276 277 1.838073 ATTTCCTTGTCCGCCGTCCT 61.838 55.000 0.00 0.00 0.00 3.85
277 278 1.366854 GATTTCCTTGTCCGCCGTCC 61.367 60.000 0.00 0.00 0.00 4.79
278 279 0.391263 AGATTTCCTTGTCCGCCGTC 60.391 55.000 0.00 0.00 0.00 4.79
279 280 0.673644 CAGATTTCCTTGTCCGCCGT 60.674 55.000 0.00 0.00 0.00 5.68
280 281 0.673644 ACAGATTTCCTTGTCCGCCG 60.674 55.000 0.00 0.00 0.00 6.46
281 282 1.534729 AACAGATTTCCTTGTCCGCC 58.465 50.000 0.00 0.00 0.00 6.13
282 283 3.203161 GAAACAGATTTCCTTGTCCGC 57.797 47.619 0.00 0.00 38.67 5.54
291 292 4.676924 CGCTCACTTTTGGAAACAGATTTC 59.323 41.667 0.00 0.00 44.54 2.17
292 293 4.499696 CCGCTCACTTTTGGAAACAGATTT 60.500 41.667 0.00 0.00 44.54 2.17
293 294 3.004734 CCGCTCACTTTTGGAAACAGATT 59.995 43.478 0.00 0.00 44.54 2.40
294 295 2.554032 CCGCTCACTTTTGGAAACAGAT 59.446 45.455 0.00 0.00 44.54 2.90
295 296 1.946768 CCGCTCACTTTTGGAAACAGA 59.053 47.619 0.00 0.00 44.54 3.41
296 297 1.676006 ACCGCTCACTTTTGGAAACAG 59.324 47.619 0.00 0.00 44.54 3.16
297 298 1.757682 ACCGCTCACTTTTGGAAACA 58.242 45.000 0.00 0.00 39.83 2.83
298 299 2.159296 ACAACCGCTCACTTTTGGAAAC 60.159 45.455 0.00 0.00 0.00 2.78
299 300 2.096248 ACAACCGCTCACTTTTGGAAA 58.904 42.857 0.00 0.00 0.00 3.13
300 301 1.757682 ACAACCGCTCACTTTTGGAA 58.242 45.000 0.00 0.00 0.00 3.53
301 302 1.403679 CAACAACCGCTCACTTTTGGA 59.596 47.619 0.00 0.00 0.00 3.53
302 303 1.838913 CAACAACCGCTCACTTTTGG 58.161 50.000 0.00 0.00 0.00 3.28
303 304 1.199624 GCAACAACCGCTCACTTTTG 58.800 50.000 0.00 0.00 0.00 2.44
304 305 0.814457 TGCAACAACCGCTCACTTTT 59.186 45.000 0.00 0.00 0.00 2.27
305 306 0.381801 CTGCAACAACCGCTCACTTT 59.618 50.000 0.00 0.00 0.00 2.66
306 307 1.447317 CCTGCAACAACCGCTCACTT 61.447 55.000 0.00 0.00 0.00 3.16
307 308 1.893808 CCTGCAACAACCGCTCACT 60.894 57.895 0.00 0.00 0.00 3.41
308 309 1.444119 TTCCTGCAACAACCGCTCAC 61.444 55.000 0.00 0.00 0.00 3.51
309 310 1.153066 TTCCTGCAACAACCGCTCA 60.153 52.632 0.00 0.00 0.00 4.26
310 311 1.166531 ACTTCCTGCAACAACCGCTC 61.167 55.000 0.00 0.00 0.00 5.03
311 312 0.107831 TACTTCCTGCAACAACCGCT 59.892 50.000 0.00 0.00 0.00 5.52
312 313 0.948678 TTACTTCCTGCAACAACCGC 59.051 50.000 0.00 0.00 0.00 5.68
313 314 2.489971 TCTTACTTCCTGCAACAACCG 58.510 47.619 0.00 0.00 0.00 4.44
314 315 3.253432 CCTTCTTACTTCCTGCAACAACC 59.747 47.826 0.00 0.00 0.00 3.77
315 316 3.883489 ACCTTCTTACTTCCTGCAACAAC 59.117 43.478 0.00 0.00 0.00 3.32
316 317 3.882888 CACCTTCTTACTTCCTGCAACAA 59.117 43.478 0.00 0.00 0.00 2.83
317 318 3.476552 CACCTTCTTACTTCCTGCAACA 58.523 45.455 0.00 0.00 0.00 3.33
318 319 2.814336 CCACCTTCTTACTTCCTGCAAC 59.186 50.000 0.00 0.00 0.00 4.17
319 320 2.441750 ACCACCTTCTTACTTCCTGCAA 59.558 45.455 0.00 0.00 0.00 4.08
320 321 2.038557 GACCACCTTCTTACTTCCTGCA 59.961 50.000 0.00 0.00 0.00 4.41
321 322 2.701107 GACCACCTTCTTACTTCCTGC 58.299 52.381 0.00 0.00 0.00 4.85
322 323 2.931320 GCGACCACCTTCTTACTTCCTG 60.931 54.545 0.00 0.00 0.00 3.86
323 324 1.275573 GCGACCACCTTCTTACTTCCT 59.724 52.381 0.00 0.00 0.00 3.36
324 325 1.001633 TGCGACCACCTTCTTACTTCC 59.998 52.381 0.00 0.00 0.00 3.46
325 326 2.067013 GTGCGACCACCTTCTTACTTC 58.933 52.381 0.00 0.00 35.92 3.01
326 327 1.414919 TGTGCGACCACCTTCTTACTT 59.585 47.619 0.00 0.00 41.35 2.24
327 328 1.045407 TGTGCGACCACCTTCTTACT 58.955 50.000 0.00 0.00 41.35 2.24
328 329 1.732259 CATGTGCGACCACCTTCTTAC 59.268 52.381 0.00 0.00 41.35 2.34
329 330 1.943968 GCATGTGCGACCACCTTCTTA 60.944 52.381 0.00 0.00 41.35 2.10
330 331 1.237285 GCATGTGCGACCACCTTCTT 61.237 55.000 0.00 0.00 41.35 2.52
331 332 1.672356 GCATGTGCGACCACCTTCT 60.672 57.895 0.00 0.00 41.35 2.85
332 333 2.870372 GCATGTGCGACCACCTTC 59.130 61.111 0.00 0.00 41.35 3.46
342 343 0.657840 GATCTAACCACCGCATGTGC 59.342 55.000 0.00 0.00 44.01 4.57
343 344 1.299541 GGATCTAACCACCGCATGTG 58.700 55.000 0.00 0.00 45.01 3.21
344 345 0.179084 CGGATCTAACCACCGCATGT 60.179 55.000 0.00 0.00 40.19 3.21
345 346 0.880278 CCGGATCTAACCACCGCATG 60.880 60.000 0.00 0.00 44.45 4.06
346 347 1.445942 CCGGATCTAACCACCGCAT 59.554 57.895 0.00 0.00 44.45 4.73
347 348 2.897207 CCGGATCTAACCACCGCA 59.103 61.111 0.00 0.00 44.45 5.69
348 349 2.588034 GCCGGATCTAACCACCGC 60.588 66.667 5.05 0.00 44.45 5.68
349 350 2.279252 CGCCGGATCTAACCACCG 60.279 66.667 5.05 0.00 45.24 4.94
350 351 2.108362 CCGCCGGATCTAACCACC 59.892 66.667 5.05 0.00 0.00 4.61
351 352 2.588034 GCCGCCGGATCTAACCAC 60.588 66.667 7.68 0.00 0.00 4.16
352 353 2.762459 AGCCGCCGGATCTAACCA 60.762 61.111 7.68 0.00 0.00 3.67
353 354 2.280186 CAGCCGCCGGATCTAACC 60.280 66.667 7.68 0.00 0.00 2.85
354 355 1.591863 GACAGCCGCCGGATCTAAC 60.592 63.158 7.68 0.00 0.00 2.34
355 356 2.016393 CTGACAGCCGCCGGATCTAA 62.016 60.000 7.68 0.00 0.00 2.10
356 357 2.441348 TGACAGCCGCCGGATCTA 60.441 61.111 7.68 0.00 0.00 1.98
357 358 3.842923 CTGACAGCCGCCGGATCT 61.843 66.667 7.68 0.00 0.00 2.75
358 359 3.371097 TTCTGACAGCCGCCGGATC 62.371 63.158 7.68 0.65 0.00 3.36
359 360 3.390521 TTCTGACAGCCGCCGGAT 61.391 61.111 7.68 0.00 0.00 4.18
360 361 4.373116 GTTCTGACAGCCGCCGGA 62.373 66.667 7.68 0.00 0.00 5.14
364 365 3.782244 CAGCGTTCTGACAGCCGC 61.782 66.667 23.48 23.48 42.95 6.53
365 366 2.049156 TCAGCGTTCTGACAGCCG 60.049 61.111 9.25 9.25 43.95 5.52
372 373 0.389817 TCCGTTGGATCAGCGTTCTG 60.390 55.000 0.00 0.00 41.67 3.02
373 374 0.108615 CTCCGTTGGATCAGCGTTCT 60.109 55.000 0.00 0.00 36.40 3.01
374 375 1.696832 GCTCCGTTGGATCAGCGTTC 61.697 60.000 0.00 0.00 36.40 3.95
375 376 1.741770 GCTCCGTTGGATCAGCGTT 60.742 57.895 0.00 0.00 36.40 4.84
376 377 2.125512 GCTCCGTTGGATCAGCGT 60.126 61.111 0.00 0.00 36.40 5.07
377 378 1.880340 GAGCTCCGTTGGATCAGCG 60.880 63.158 0.87 0.00 37.79 5.18
378 379 1.522580 GGAGCTCCGTTGGATCAGC 60.523 63.158 19.06 0.00 0.00 4.26
379 380 0.467384 ATGGAGCTCCGTTGGATCAG 59.533 55.000 27.43 0.00 39.43 2.90
380 381 0.178767 CATGGAGCTCCGTTGGATCA 59.821 55.000 25.46 6.15 39.43 2.92
381 382 0.179000 ACATGGAGCTCCGTTGGATC 59.821 55.000 29.10 7.71 39.43 3.36
382 383 0.107508 CACATGGAGCTCCGTTGGAT 60.108 55.000 29.10 16.20 39.43 3.41
383 384 1.296392 CACATGGAGCTCCGTTGGA 59.704 57.895 29.10 14.76 39.43 3.53
384 385 1.746615 CCACATGGAGCTCCGTTGG 60.747 63.158 29.10 28.24 39.43 3.77
385 386 2.401766 GCCACATGGAGCTCCGTTG 61.402 63.158 25.46 25.78 39.43 4.10
386 387 2.045926 GCCACATGGAGCTCCGTT 60.046 61.111 25.46 13.57 39.43 4.44
387 388 4.457496 CGCCACATGGAGCTCCGT 62.457 66.667 27.43 25.04 39.43 4.69
389 390 3.112205 ATCCGCCACATGGAGCTCC 62.112 63.158 26.78 26.78 39.30 4.70
390 391 1.890979 CATCCGCCACATGGAGCTC 60.891 63.158 4.71 4.71 39.30 4.09
391 392 2.191375 CATCCGCCACATGGAGCT 59.809 61.111 0.87 0.00 39.30 4.09
392 393 1.315257 AAACATCCGCCACATGGAGC 61.315 55.000 0.87 0.00 39.30 4.70
393 394 0.734889 GAAACATCCGCCACATGGAG 59.265 55.000 0.87 0.00 39.30 3.86
394 395 0.327924 AGAAACATCCGCCACATGGA 59.672 50.000 0.87 0.00 40.46 3.41
395 396 2.036958 TAGAAACATCCGCCACATGG 57.963 50.000 0.00 0.00 38.53 3.66
396 397 4.574421 TGTATTAGAAACATCCGCCACATG 59.426 41.667 0.00 0.00 0.00 3.21
397 398 4.574828 GTGTATTAGAAACATCCGCCACAT 59.425 41.667 0.00 0.00 0.00 3.21
398 399 3.936453 GTGTATTAGAAACATCCGCCACA 59.064 43.478 0.00 0.00 0.00 4.17
399 400 4.189231 AGTGTATTAGAAACATCCGCCAC 58.811 43.478 0.00 0.00 0.00 5.01
400 401 4.439057 GAGTGTATTAGAAACATCCGCCA 58.561 43.478 0.00 0.00 0.00 5.69
401 402 3.489785 CGAGTGTATTAGAAACATCCGCC 59.510 47.826 0.00 0.00 0.00 6.13
402 403 4.110482 ACGAGTGTATTAGAAACATCCGC 58.890 43.478 0.00 0.00 31.89 5.54
403 404 4.436847 CGACGAGTGTATTAGAAACATCCG 59.563 45.833 0.00 0.00 33.62 4.18
404 405 4.738740 CCGACGAGTGTATTAGAAACATCC 59.261 45.833 0.00 0.00 0.00 3.51
405 406 5.229469 CACCGACGAGTGTATTAGAAACATC 59.771 44.000 0.00 0.00 32.89 3.06
406 407 5.100259 CACCGACGAGTGTATTAGAAACAT 58.900 41.667 0.00 0.00 32.89 2.71
407 408 4.478699 CACCGACGAGTGTATTAGAAACA 58.521 43.478 0.00 0.00 32.89 2.83
408 409 3.855950 CCACCGACGAGTGTATTAGAAAC 59.144 47.826 13.14 0.00 35.93 2.78
409 410 3.758023 TCCACCGACGAGTGTATTAGAAA 59.242 43.478 13.14 0.00 35.93 2.52
410 411 3.127548 GTCCACCGACGAGTGTATTAGAA 59.872 47.826 13.14 0.00 35.93 2.10
411 412 2.679837 GTCCACCGACGAGTGTATTAGA 59.320 50.000 13.14 3.31 35.93 2.10
412 413 3.062323 GTCCACCGACGAGTGTATTAG 57.938 52.381 13.14 1.47 35.93 1.73
423 424 1.661197 TTGTTACGCGTCCACCGAC 60.661 57.895 18.63 6.93 39.56 4.79
424 425 1.661197 GTTGTTACGCGTCCACCGA 60.661 57.895 18.63 2.74 39.56 4.69
425 426 0.387112 TAGTTGTTACGCGTCCACCG 60.387 55.000 18.63 0.00 40.40 4.94
426 427 1.343506 CTAGTTGTTACGCGTCCACC 58.656 55.000 18.63 6.65 0.00 4.61
427 428 0.712222 GCTAGTTGTTACGCGTCCAC 59.288 55.000 18.63 15.25 0.00 4.02
428 429 0.730155 CGCTAGTTGTTACGCGTCCA 60.730 55.000 18.63 11.82 40.64 4.02
429 430 1.986154 CGCTAGTTGTTACGCGTCC 59.014 57.895 18.63 8.72 40.64 4.79
433 434 2.207041 CAACACGCTAGTTGTTACGC 57.793 50.000 10.45 0.00 42.93 4.42
440 441 1.871039 ACGAATTGCAACACGCTAGTT 59.129 42.857 21.35 2.59 43.06 2.24
441 442 1.194547 CACGAATTGCAACACGCTAGT 59.805 47.619 21.35 5.62 43.06 2.57
442 443 1.459209 TCACGAATTGCAACACGCTAG 59.541 47.619 21.35 14.06 43.06 3.42
443 444 1.193650 GTCACGAATTGCAACACGCTA 59.806 47.619 21.35 10.81 43.06 4.26
444 445 0.041312 GTCACGAATTGCAACACGCT 60.041 50.000 21.35 10.15 43.06 5.07
445 446 1.320382 CGTCACGAATTGCAACACGC 61.320 55.000 21.35 9.07 42.89 5.34
446 447 1.320382 GCGTCACGAATTGCAACACG 61.320 55.000 20.31 20.31 0.00 4.49
447 448 0.041312 AGCGTCACGAATTGCAACAC 60.041 50.000 0.00 0.00 0.00 3.32
448 449 0.234625 GAGCGTCACGAATTGCAACA 59.765 50.000 0.00 0.00 0.00 3.33
449 450 0.234625 TGAGCGTCACGAATTGCAAC 59.765 50.000 0.00 0.00 0.00 4.17
450 451 0.234625 GTGAGCGTCACGAATTGCAA 59.765 50.000 0.00 0.00 37.67 4.08
451 452 1.859398 GTGAGCGTCACGAATTGCA 59.141 52.632 0.00 0.00 37.67 4.08
452 453 4.725758 GTGAGCGTCACGAATTGC 57.274 55.556 0.00 0.00 37.67 3.56
463 464 0.738975 TAGATCTTCCCACGTGAGCG 59.261 55.000 19.30 3.87 44.93 5.03
464 465 2.541556 GTTAGATCTTCCCACGTGAGC 58.458 52.381 19.30 0.00 0.00 4.26
465 466 2.479730 CCGTTAGATCTTCCCACGTGAG 60.480 54.545 19.30 3.03 0.00 3.51
466 467 1.475280 CCGTTAGATCTTCCCACGTGA 59.525 52.381 19.30 0.00 0.00 4.35
467 468 1.922570 CCGTTAGATCTTCCCACGTG 58.077 55.000 9.08 9.08 0.00 4.49
468 469 0.175073 GCCGTTAGATCTTCCCACGT 59.825 55.000 0.00 0.00 0.00 4.49
469 470 0.174845 TGCCGTTAGATCTTCCCACG 59.825 55.000 0.00 5.06 0.00 4.94
470 471 2.158957 TCATGCCGTTAGATCTTCCCAC 60.159 50.000 0.00 0.00 0.00 4.61
471 472 2.103094 CTCATGCCGTTAGATCTTCCCA 59.897 50.000 0.00 0.00 0.00 4.37
472 473 2.365617 TCTCATGCCGTTAGATCTTCCC 59.634 50.000 0.00 0.00 0.00 3.97
473 474 3.553922 CCTCTCATGCCGTTAGATCTTCC 60.554 52.174 0.00 0.00 0.00 3.46
474 475 3.068873 ACCTCTCATGCCGTTAGATCTTC 59.931 47.826 0.00 0.00 0.00 2.87
475 476 3.034635 ACCTCTCATGCCGTTAGATCTT 58.965 45.455 0.00 0.00 0.00 2.40
476 477 2.363680 CACCTCTCATGCCGTTAGATCT 59.636 50.000 0.00 0.00 0.00 2.75
477 478 2.546795 CCACCTCTCATGCCGTTAGATC 60.547 54.545 0.00 0.00 0.00 2.75
478 479 1.414181 CCACCTCTCATGCCGTTAGAT 59.586 52.381 0.00 0.00 0.00 1.98
479 480 0.824109 CCACCTCTCATGCCGTTAGA 59.176 55.000 0.00 0.00 0.00 2.10
480 481 0.537188 ACCACCTCTCATGCCGTTAG 59.463 55.000 0.00 0.00 0.00 2.34
481 482 0.535335 GACCACCTCTCATGCCGTTA 59.465 55.000 0.00 0.00 0.00 3.18
482 483 1.296715 GACCACCTCTCATGCCGTT 59.703 57.895 0.00 0.00 0.00 4.44
483 484 2.982130 GACCACCTCTCATGCCGT 59.018 61.111 0.00 0.00 0.00 5.68
484 485 2.021068 ATCGACCACCTCTCATGCCG 62.021 60.000 0.00 0.00 0.00 5.69
485 486 0.249657 GATCGACCACCTCTCATGCC 60.250 60.000 0.00 0.00 0.00 4.40
486 487 0.749649 AGATCGACCACCTCTCATGC 59.250 55.000 0.00 0.00 0.00 4.06
487 488 3.452474 GAAAGATCGACCACCTCTCATG 58.548 50.000 0.00 0.00 0.00 3.07
488 489 2.432510 GGAAAGATCGACCACCTCTCAT 59.567 50.000 0.00 0.00 0.00 2.90
489 490 1.825474 GGAAAGATCGACCACCTCTCA 59.175 52.381 0.00 0.00 0.00 3.27
490 491 1.137282 GGGAAAGATCGACCACCTCTC 59.863 57.143 0.00 0.00 0.00 3.20
491 492 1.196012 GGGAAAGATCGACCACCTCT 58.804 55.000 0.00 0.00 0.00 3.69
492 493 0.179108 CGGGAAAGATCGACCACCTC 60.179 60.000 0.00 0.00 0.00 3.85
493 494 0.613853 TCGGGAAAGATCGACCACCT 60.614 55.000 0.00 0.00 0.00 4.00
494 495 0.248289 TTCGGGAAAGATCGACCACC 59.752 55.000 0.00 0.00 34.99 4.61
495 496 1.067071 AGTTCGGGAAAGATCGACCAC 60.067 52.381 0.00 0.00 34.99 4.16
496 497 1.263356 AGTTCGGGAAAGATCGACCA 58.737 50.000 0.00 0.00 34.99 4.02
497 498 2.269172 GAAGTTCGGGAAAGATCGACC 58.731 52.381 0.00 0.00 34.99 4.79
498 499 2.955614 TGAAGTTCGGGAAAGATCGAC 58.044 47.619 0.00 0.00 34.99 4.20
499 500 3.671008 TTGAAGTTCGGGAAAGATCGA 57.329 42.857 0.00 0.00 0.00 3.59
500 501 4.437390 CCAATTGAAGTTCGGGAAAGATCG 60.437 45.833 7.12 0.00 0.00 3.69
501 502 4.675408 GCCAATTGAAGTTCGGGAAAGATC 60.675 45.833 7.12 0.00 0.00 2.75
502 503 3.193479 GCCAATTGAAGTTCGGGAAAGAT 59.807 43.478 7.12 0.00 0.00 2.40
503 504 2.556622 GCCAATTGAAGTTCGGGAAAGA 59.443 45.455 7.12 0.00 0.00 2.52
504 505 2.668279 CGCCAATTGAAGTTCGGGAAAG 60.668 50.000 7.12 0.00 0.00 2.62
505 506 1.268352 CGCCAATTGAAGTTCGGGAAA 59.732 47.619 7.12 0.00 0.00 3.13
506 507 0.878416 CGCCAATTGAAGTTCGGGAA 59.122 50.000 7.12 0.00 0.00 3.97
507 508 0.250553 ACGCCAATTGAAGTTCGGGA 60.251 50.000 7.12 0.00 0.00 5.14
508 509 0.109781 CACGCCAATTGAAGTTCGGG 60.110 55.000 7.12 0.00 0.00 5.14
509 510 0.591170 ACACGCCAATTGAAGTTCGG 59.409 50.000 7.12 0.00 0.00 4.30
510 511 2.043411 CAACACGCCAATTGAAGTTCG 58.957 47.619 7.12 4.93 0.00 3.95
511 512 2.788786 CACAACACGCCAATTGAAGTTC 59.211 45.455 7.12 0.00 0.00 3.01
512 513 2.808244 CACAACACGCCAATTGAAGTT 58.192 42.857 7.12 3.22 0.00 2.66
513 514 1.535860 GCACAACACGCCAATTGAAGT 60.536 47.619 7.12 3.39 0.00 3.01
514 515 1.130955 GCACAACACGCCAATTGAAG 58.869 50.000 7.12 2.70 0.00 3.02
515 516 0.743688 AGCACAACACGCCAATTGAA 59.256 45.000 7.12 0.00 0.00 2.69
516 517 0.743688 AAGCACAACACGCCAATTGA 59.256 45.000 7.12 0.00 0.00 2.57
517 518 1.569708 AAAGCACAACACGCCAATTG 58.430 45.000 0.00 0.00 0.00 2.32
518 519 2.307934 AAAAGCACAACACGCCAATT 57.692 40.000 0.00 0.00 0.00 2.32
519 520 2.307934 AAAAAGCACAACACGCCAAT 57.692 40.000 0.00 0.00 0.00 3.16
520 521 2.941453 TAAAAAGCACAACACGCCAA 57.059 40.000 0.00 0.00 0.00 4.52
521 522 2.359214 TCATAAAAAGCACAACACGCCA 59.641 40.909 0.00 0.00 0.00 5.69
522 523 3.006659 TCATAAAAAGCACAACACGCC 57.993 42.857 0.00 0.00 0.00 5.68
523 524 3.364621 CCATCATAAAAAGCACAACACGC 59.635 43.478 0.00 0.00 0.00 5.34
524 525 4.545610 ACCATCATAAAAAGCACAACACG 58.454 39.130 0.00 0.00 0.00 4.49
525 526 5.982516 TCAACCATCATAAAAAGCACAACAC 59.017 36.000 0.00 0.00 0.00 3.32
526 527 6.154203 TCAACCATCATAAAAAGCACAACA 57.846 33.333 0.00 0.00 0.00 3.33
527 528 6.401367 GCATCAACCATCATAAAAAGCACAAC 60.401 38.462 0.00 0.00 0.00 3.32
528 529 5.638657 GCATCAACCATCATAAAAAGCACAA 59.361 36.000 0.00 0.00 0.00 3.33
529 530 5.170021 GCATCAACCATCATAAAAAGCACA 58.830 37.500 0.00 0.00 0.00 4.57
530 531 4.567959 GGCATCAACCATCATAAAAAGCAC 59.432 41.667 0.00 0.00 0.00 4.40
531 532 4.677514 CGGCATCAACCATCATAAAAAGCA 60.678 41.667 0.00 0.00 0.00 3.91
532 533 3.798337 CGGCATCAACCATCATAAAAAGC 59.202 43.478 0.00 0.00 0.00 3.51
533 534 5.247507 TCGGCATCAACCATCATAAAAAG 57.752 39.130 0.00 0.00 0.00 2.27
534 535 5.850557 ATCGGCATCAACCATCATAAAAA 57.149 34.783 0.00 0.00 0.00 1.94
540 541 5.850557 AAATTAATCGGCATCAACCATCA 57.149 34.783 0.00 0.00 0.00 3.07
576 577 7.039152 TGCCTTTAATTCATGATTTTGACTGGA 60.039 33.333 8.07 0.00 0.00 3.86
578 579 8.537049 TTGCCTTTAATTCATGATTTTGACTG 57.463 30.769 8.07 0.00 0.00 3.51
609 610 6.991938 AGCACTCTCATTCAGGTAAGATATC 58.008 40.000 0.00 0.00 0.00 1.63
630 631 5.123820 CACCGGATTGATTTCTTAAGAAGCA 59.876 40.000 17.05 15.89 35.21 3.91
695 696 6.127338 GGCCTTAATTTTGGAGCTCTTACATT 60.127 38.462 14.64 9.80 0.00 2.71
696 697 5.360999 GGCCTTAATTTTGGAGCTCTTACAT 59.639 40.000 14.64 0.00 0.00 2.29
697 698 4.705023 GGCCTTAATTTTGGAGCTCTTACA 59.295 41.667 14.64 0.00 0.00 2.41
698 699 4.705023 TGGCCTTAATTTTGGAGCTCTTAC 59.295 41.667 14.64 0.00 0.00 2.34
699 700 4.929479 TGGCCTTAATTTTGGAGCTCTTA 58.071 39.130 14.64 0.68 0.00 2.10
700 701 3.766051 CTGGCCTTAATTTTGGAGCTCTT 59.234 43.478 14.64 1.75 0.00 2.85
701 702 3.359950 CTGGCCTTAATTTTGGAGCTCT 58.640 45.455 14.64 0.00 0.00 4.09
702 703 2.428530 CCTGGCCTTAATTTTGGAGCTC 59.571 50.000 4.71 4.71 0.00 4.09
703 704 2.042979 TCCTGGCCTTAATTTTGGAGCT 59.957 45.455 3.32 0.00 0.00 4.09
704 705 2.456577 TCCTGGCCTTAATTTTGGAGC 58.543 47.619 3.32 0.00 0.00 4.70
705 706 3.118992 GCTTCCTGGCCTTAATTTTGGAG 60.119 47.826 3.32 0.00 0.00 3.86
708 709 3.959535 TGCTTCCTGGCCTTAATTTTG 57.040 42.857 3.32 0.00 0.00 2.44
709 710 3.452264 GGATGCTTCCTGGCCTTAATTTT 59.548 43.478 11.34 0.00 39.14 1.82
710 711 3.033909 GGATGCTTCCTGGCCTTAATTT 58.966 45.455 11.34 0.00 39.14 1.82
711 712 2.670939 GGATGCTTCCTGGCCTTAATT 58.329 47.619 11.34 0.00 39.14 1.40
712 713 1.477558 CGGATGCTTCCTGGCCTTAAT 60.478 52.381 16.03 0.00 40.17 1.40
713 714 0.107214 CGGATGCTTCCTGGCCTTAA 60.107 55.000 16.03 0.00 40.17 1.85
714 715 1.526887 CGGATGCTTCCTGGCCTTA 59.473 57.895 16.03 0.00 40.17 2.69
763 764 2.823196 TTGAGCGTTTGAGTGTTGTG 57.177 45.000 0.00 0.00 0.00 3.33
764 765 2.747446 AGTTTGAGCGTTTGAGTGTTGT 59.253 40.909 0.00 0.00 0.00 3.32
808 809 1.888436 CTGCCTGGAAGCCTGTCGTA 61.888 60.000 0.00 0.00 0.00 3.43
853 854 1.444917 CGAGTCGGATCGGATGTCCA 61.445 60.000 4.10 0.00 39.04 4.02
875 876 4.003788 AAGGCTGTCCGGTCGTGG 62.004 66.667 0.00 0.00 37.47 4.94
929 931 3.879903 GCGATCTGCGAAATTGCG 58.120 55.556 0.00 0.00 44.57 4.85
957 959 2.797491 TCGTACTGCGTGATGAATGAG 58.203 47.619 0.00 0.00 42.13 2.90
970 972 0.588233 CGATCCGGTCGTTCGTACTG 60.588 60.000 15.48 0.00 45.19 2.74
991 993 3.539791 GGCCGCCATGGGAATTGG 61.540 66.667 15.13 0.00 38.63 3.16
1008 1010 2.751913 CGACCACTCCGGACTCGAG 61.752 68.421 11.84 11.84 39.00 4.04
1231 1233 1.466360 GCCGATGCATCTTGTGTTCAC 60.466 52.381 23.73 0.00 37.47 3.18
1537 1539 0.094730 CCGAGGAACGCAAAATCGAC 59.905 55.000 0.00 0.00 41.07 4.20
1560 1562 3.068165 CCTTGGTGATCACGTAGAGCATA 59.932 47.826 19.33 2.19 45.61 3.14
1615 1617 2.827051 CGGGCTTGCCATCATCGTG 61.827 63.158 14.04 0.00 0.00 4.35
1759 1761 3.928992 TCTTCTTGACTCAACGCATCATC 59.071 43.478 0.00 0.00 0.00 2.92
1934 1936 1.165270 AACCATGAGCAACTTACCGC 58.835 50.000 0.00 0.00 0.00 5.68
2208 2210 5.287226 CAATAGGCGTCTAACCGACTTATT 58.713 41.667 0.00 0.00 46.00 1.40
2228 2231 2.621526 GGAAAAACACACGTCCTCCAAT 59.378 45.455 0.00 0.00 0.00 3.16
2244 2247 1.770061 ACAACTAGGTCCGGTGGAAAA 59.230 47.619 0.00 0.00 31.38 2.29
2371 2374 8.083828 ACCTACAACATGATTCTCATAGTTCT 57.916 34.615 0.00 0.00 34.28 3.01
2624 2627 5.353394 AGAATATTTGTCCGGAGCACTTA 57.647 39.130 3.06 1.39 0.00 2.24
2642 2645 4.248859 CCGAAGAATCATGCGGATAGAAT 58.751 43.478 1.39 0.00 46.29 2.40
2649 2652 2.628106 CGCCGAAGAATCATGCGG 59.372 61.111 0.00 0.00 46.14 5.69
2707 2710 7.231317 TCAAAATCCTTTTCTGCTGAACATACT 59.769 33.333 5.41 0.00 31.02 2.12
2755 2758 4.901868 ACATAGCTTCCTTGGTACGAAAA 58.098 39.130 0.00 0.00 0.00 2.29
2760 2763 5.938125 TCAAGAAACATAGCTTCCTTGGTAC 59.062 40.000 0.00 0.00 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.