AutoCloner

Multiple sequence alignment - TraesCS6B01G389000

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BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS6B01G389000	chr6B	100.000	2522	0	0	5430	7951	664065980	664063459	0.000000e+00	4658.0
1	TraesCS6B01G389000	chr6B	100.000	2445	0	0	1	2445	664071409	664068965	0.000000e+00	4516.0
2	TraesCS6B01G389000	chr6B	100.000	1854	0	0	2816	4669	664068594	664066741	0.000000e+00	3424.0
3	TraesCS6B01G389000	chr6B	88.493	2216	182	31	5798	7951	664024968	664022764	0.000000e+00	2612.0
4	TraesCS6B01G389000	chr6B	95.204	563	26	1	3463	4024	664025534	664024972	0.000000e+00	889.0
5	TraesCS6B01G389000	chr6B	84.591	636	66	17	878	1498	664026814	664026196	3.170000e-168	603.0
6	TraesCS6B01G389000	chr6B	93.972	282	14	1	4391	4669	308581493	308581774	2.650000e-114	424.0
7	TraesCS6B01G389000	chr6B	88.669	353	20	1	5430	5782	19038445	19038113	5.740000e-111	412.0
8	TraesCS6B01G389000	chr6B	75.646	813	171	22	6932	7729	26398359	26397559	5.820000e-101	379.0
9	TraesCS6B01G389000	chr6B	93.636	220	9	4	5	224	584660105	584659891	2.770000e-84	324.0
10	TraesCS6B01G389000	chr6B	90.909	220	13	6	5	224	270900320	270900532	1.010000e-73	289.0
11	TraesCS6B01G389000	chr6B	78.149	389	77	6	1030	1417	149468177	149467796	2.870000e-59	241.0
12	TraesCS6B01G389000	chr6B	90.000	110	11	0	6335	6444	333895498	333895389	8.320000e-30	143.0
13	TraesCS6B01G389000	chr6B	88.991	109	8	3	6336	6442	599445724	599445618	1.800000e-26	132.0
14	TraesCS6B01G389000	chr6B	100.000	28	0	0	1510	1537	664026199	664026172	1.400000e-02	52.8
15	TraesCS6B01G389000	chr6A	90.046	1507	119	18	6448	7951	587692950	587691472	0.000000e+00	1923.0
16	TraesCS6B01G389000	chr6A	84.373	1555	178	30	6451	7951	587745914	587744371	0.000000e+00	1465.0
17	TraesCS6B01G389000	chr6A	93.392	802	48	3	1560	2359	419774090	419773292	0.000000e+00	1182.0
18	TraesCS6B01G389000	chr6A	89.196	759	57	12	680	1426	587749693	587748948	0.000000e+00	924.0
19	TraesCS6B01G389000	chr6A	86.152	686	61	19	859	1537	587698732	587698074	0.000000e+00	710.0
20	TraesCS6B01G389000	chr6A	91.786	487	39	1	3456	3941	587748358	587747872	0.000000e+00	676.0
21	TraesCS6B01G389000	chr6A	91.028	457	40	1	3456	3911	587693673	587693217	4.080000e-172	616.0
22	TraesCS6B01G389000	chr6A	91.501	353	10	1	5430	5782	113512053	113511721	1.210000e-127	468.0
23	TraesCS6B01G389000	chr6A	83.503	394	48	6	225	615	587750069	587749690	1.270000e-92	351.0
24	TraesCS6B01G389000	chr6A	78.406	389	76	6	1030	1417	91882452	91882071	6.160000e-61	246.0
25	TraesCS6B01G389000	chr6A	78.711	357	76	0	3501	3857	91905985	91905629	1.030000e-58	239.0
26	TraesCS6B01G389000	chr6A	90.909	165	13	2	5816	5978	587693141	587692977	3.740000e-53	220.0
27	TraesCS6B01G389000	chr6A	80.000	140	21	6	6117	6253	587746160	587746025	6.570000e-16	97.1
28	TraesCS6B01G389000	chr6D	94.737	874	44	1	6798	7671	438837524	438836653	0.000000e+00	1358.0
29	TraesCS6B01G389000	chr6D	93.594	562	34	2	3464	4024	438838535	438837975	0.000000e+00	837.0
30	TraesCS6B01G389000	chr6D	90.991	555	44	6	878	1426	438839694	438839140	0.000000e+00	743.0
31	TraesCS6B01G389000	chr6D	75.892	813	173	18	6930	7729	14934409	14935211	2.080000e-105	394.0
32	TraesCS6B01G389000	chr6D	78.880	393	75	6	1030	1421	75869636	75869251	7.920000e-65	259.0
33	TraesCS6B01G389000	chr6D	89.091	110	12	0	6333	6442	401298628	401298519	3.870000e-28	137.0
34	TraesCS6B01G389000	chr6D	88.034	117	10	3	6329	6443	81674751	81674637	1.390000e-27	135.0
35	TraesCS6B01G389000	chr6D	89.189	111	8	3	6334	6442	382979487	382979379	1.390000e-27	135.0
36	TraesCS6B01G389000	chr6D	88.991	109	10	2	6335	6442	130301064	130300957	5.010000e-27	134.0
37	TraesCS6B01G389000	chr6D	88.785	107	12	0	6336	6442	99226287	99226181	1.800000e-26	132.0
38	TraesCS6B01G389000	chr6D	88.073	109	11	2	6335	6442	461414909	461414802	2.330000e-25	128.0
39	TraesCS6B01G389000	chr6D	87.500	112	10	3	6333	6442	112344373	112344482	8.380000e-25	126.0
40	TraesCS6B01G389000	chr6D	86.325	117	11	4	6329	6442	379228376	379228490	1.080000e-23	122.0
41	TraesCS6B01G389000	chr2D	93.860	798	45	4	1559	2354	558787864	558788659	0.000000e+00	1199.0
42	TraesCS6B01G389000	chr2D	89.720	107	11	0	6336	6442	154110675	154110781	3.870000e-28	137.0
43	TraesCS6B01G389000	chr1D	93.500	800	50	2	1562	2359	233886414	233887213	0.000000e+00	1188.0
44	TraesCS6B01G389000	chr1D	95.584	385	15	2	4025	4407	375937156	375936772	4.080000e-172	616.0
45	TraesCS6B01G389000	chr1D	76.383	741	160	14	6999	7730	483693208	483692474	1.250000e-102	385.0
46	TraesCS6B01G389000	chr1D	75.278	809	175	16	6936	7730	483874007	483873210	5.860000e-96	363.0
47	TraesCS6B01G389000	chr1D	78.400	250	49	4	3498	3743	483875270	483875022	2.970000e-34	158.0
48	TraesCS6B01G389000	chr1D	88.288	111	13	0	6332	6442	443424623	443424733	5.010000e-27	134.0
49	TraesCS6B01G389000	chr1D	87.395	119	9	5	6327	6442	11672292	11672177	1.800000e-26	132.0
50	TraesCS6B01G389000	chr1D	88.393	112	9	3	6335	6444	411310795	411310686	1.800000e-26	132.0
51	TraesCS6B01G389000	chr3D	93.383	801	49	3	1561	2359	20702649	20703447	0.000000e+00	1182.0
52	TraesCS6B01G389000	chr3D	96.623	385	11	2	4025	4407	268945176	268944792	8.700000e-179	638.0
53	TraesCS6B01G389000	chr3D	91.501	353	9	2	5430	5782	268943366	268943035	4.350000e-127	466.0
54	TraesCS6B01G389000	chr3D	93.190	279	16	1	4394	4669	268944849	268944571	2.670000e-109	407.0
55	TraesCS6B01G389000	chr3D	86.992	123	12	3	6333	6453	326124621	326124501	1.390000e-27	135.0
56	TraesCS6B01G389000	chr3D	88.991	109	12	0	6333	6441	597483301	597483193	1.390000e-27	135.0
57	TraesCS6B01G389000	chr3B	93.350	797	51	2	1564	2358	829033342	829032546	0.000000e+00	1177.0
58	TraesCS6B01G389000	chr3B	96.867	383	10	1	4020	4402	790745003	790745383	2.420000e-179	640.0
59	TraesCS6B01G389000	chr3B	93.888	409	18	6	4025	4430	68497322	68496918	1.900000e-170	610.0
60	TraesCS6B01G389000	chr3B	91.501	353	10	1	5430	5782	522241807	522241475	1.210000e-127	468.0
61	TraesCS6B01G389000	chr3B	90.368	353	14	1	5430	5782	256203727	256203395	5.660000e-121	446.0
62	TraesCS6B01G389000	chr3B	94.326	282	13	1	4391	4669	745614136	745614417	5.700000e-116	429.0
63	TraesCS6B01G389000	chr3B	89.474	114	8	3	6333	6444	779534220	779534331	2.990000e-29	141.0
64	TraesCS6B01G389000	chr3B	90.826	109	5	4	6336	6442	812819348	812819453	2.990000e-29	141.0
65	TraesCS6B01G389000	chr1A	93.258	801	51	3	1561	2359	78542762	78541963	0.000000e+00	1177.0
66	TraesCS6B01G389000	chr1A	75.849	795	175	14	6943	7730	580741805	580741021	9.680000e-104	388.0
67	TraesCS6B01G389000	chr1A	74.969	811	173	23	6936	7730	580568883	580568087	5.910000e-91	346.0
68	TraesCS6B01G389000	chr1A	75.034	733	160	19	6936	7655	580585466	580584744	1.290000e-82	318.0
69	TraesCS6B01G389000	chr1A	74.003	727	174	9	6935	7655	580662907	580662190	1.690000e-71	281.0
70	TraesCS6B01G389000	chr1A	78.892	379	66	12	1012	1386	586348165	586347797	2.220000e-60	244.0
71	TraesCS6B01G389000	chr1A	79.600	250	46	4	3498	3743	580572070	580571822	2.950000e-39	174.0
72	TraesCS6B01G389000	chr1A	79.295	227	42	4	3498	3720	580586687	580586462	3.840000e-33	154.0
73	TraesCS6B01G389000	chr1A	89.091	110	12	0	6336	6445	513298076	513297967	3.870000e-28	137.0
74	TraesCS6B01G389000	chr1A	87.288	118	15	0	6325	6442	69386495	69386612	1.390000e-27	135.0
75	TraesCS6B01G389000	chr5B	93.069	808	48	5	1553	2359	38148262	38149062	0.000000e+00	1175.0
76	TraesCS6B01G389000	chr5B	95.584	385	15	2	4025	4407	376330510	376330126	4.080000e-172	616.0
77	TraesCS6B01G389000	chr5B	90.652	353	13	1	5430	5782	108181592	108181260	1.220000e-122	451.0
78	TraesCS6B01G389000	chr5B	90.652	353	13	1	5430	5782	157391465	157391133	1.220000e-122	451.0
79	TraesCS6B01G389000	chr5B	91.919	297	16	5	4380	4669	412442947	412442652	7.430000e-110	409.0
80	TraesCS6B01G389000	chr5B	93.636	220	11	3	5	224	65245181	65244965	7.690000e-85	326.0
81	TraesCS6B01G389000	chr5B	89.908	109	11	0	6335	6443	531199962	531200070	2.990000e-29	141.0
82	TraesCS6B01G389000	chr2B	93.258	801	49	3	1560	2358	667256036	667256833	0.000000e+00	1175.0
83	TraesCS6B01G389000	chr2B	95.337	386	13	4	4024	4407	349928992	349928610	6.820000e-170	608.0
84	TraesCS6B01G389000	chr2B	92.908	282	17	1	4391	4669	559424859	559424578	2.670000e-109	407.0
85	TraesCS6B01G389000	chr2B	93.243	222	12	2	5	224	786958117	786958337	2.770000e-84	324.0
86	TraesCS6B01G389000	chr2B	93.182	220	11	3	5	224	786915013	786915228	3.580000e-83	320.0
87	TraesCS6B01G389000	chr2B	91.364	220	18	1	5	224	785955377	785955159	4.660000e-77	300.0
88	TraesCS6B01G389000	chr1B	93.258	801	48	4	1561	2359	5992908	5993704	0.000000e+00	1175.0
89	TraesCS6B01G389000	chr1B	96.364	385	12	2	4025	4407	57107514	57107130	4.050000e-177	632.0
90	TraesCS6B01G389000	chr1B	99.301	143	1	0	5640	5782	396603844	396603986	7.920000e-65	259.0
91	TraesCS6B01G389000	chr1B	82.540	252	42	2	1012	1262	679656448	679656198	3.740000e-53	220.0
92	TraesCS6B01G389000	chr1B	75.069	361	90	0	3497	3857	673875900	673875540	1.370000e-37	169.0
93	TraesCS6B01G389000	chr1B	89.189	111	12	0	6332	6442	15616939	15616829	1.080000e-28	139.0
94	TraesCS6B01G389000	chr1B	89.815	108	11	0	6336	6443	27713519	27713412	1.080000e-28	139.0
95	TraesCS6B01G389000	chr5A	95.844	385	14	2	4025	4407	313876611	313876227	8.760000e-174	621.0
96	TraesCS6B01G389000	chr5A	92.479	359	20	6	5430	5782	296480940	296480583	2.560000e-139	507.0
97	TraesCS6B01G389000	chr5A	92.908	282	17	1	4391	4669	313876287	313876006	2.670000e-109	407.0
98	TraesCS6B01G389000	chr5A	92.908	282	17	1	4391	4669	602250876	602251157	2.670000e-109	407.0
99	TraesCS6B01G389000	chr4B	96.032	378	15	0	4025	4402	73278020	73278397	4.080000e-172	616.0
100	TraesCS6B01G389000	chr4B	91.501	353	10	1	5430	5782	324974680	324974348	1.210000e-127	468.0
101	TraesCS6B01G389000	chr4B	90.935	353	11	2	5430	5782	73279294	73279625	9.410000e-124	455.0
102	TraesCS6B01G389000	chr4B	90.935	353	11	2	5430	5782	634320087	634319756	9.410000e-124	455.0
103	TraesCS6B01G389000	chr4B	91.403	221	13	3	5	225	64113467	64113681	1.680000e-76	298.0
104	TraesCS6B01G389000	chr3A	91.218	353	11	1	5430	5782	408030501	408030833	5.620000e-126	462.0
105	TraesCS6B01G389000	chr2A	91.218	353	11	1	5430	5782	551716570	551716238	5.620000e-126	462.0
106	TraesCS6B01G389000	chr2A	87.805	123	11	3	6326	6444	45119652	45119774	2.990000e-29	141.0
107	TraesCS6B01G389000	chr4A	76.773	818	166	20	6926	7730	729746143	729746949	3.410000e-118	436.0
108	TraesCS6B01G389000	chr7D	94.286	280	12	4	4391	4667	9131132	9131410	7.370000e-115	425.0
109	TraesCS6B01G389000	chr7D	76.645	775	159	20	6926	7690	10038720	10039482	7.430000e-110	409.0
110	TraesCS6B01G389000	chr7D	91.667	228	15	2	5	231	37852944	37852720	5.990000e-81	313.0
111	TraesCS6B01G389000	chr7B	90.764	314	17	8	4368	4669	83090180	83090493	7.430000e-110	409.0
112	TraesCS6B01G389000	chr7B	96.875	32	0	1	3064	3095	194134463	194134433	1.400000e-02	52.8
113	TraesCS6B01G389000	chrUn	92.444	225	10	3	5	229	475007334	475007117	1.670000e-81	315.0
114	TraesCS6B01G389000	chrUn	89.524	105	7	4	6355	6456	380526184	380526081	6.480000e-26	130.0
115	TraesCS6B01G389000	chrUn	92.308	91	5	2	6355	6444	11850076	11850165	2.330000e-25	128.0
116	TraesCS6B01G389000	chrUn	92.308	91	5	2	6355	6444	351755279	351755190	2.330000e-25	128.0
117	TraesCS6B01G389000	chrUn	95.062	81	3	1	6364	6444	100620802	100620881	8.380000e-25	126.0
118	TraesCS6B01G389000	chrUn	95.946	74	3	0	6369	6442	81697159	81697232	3.900000e-23	121.0
119	TraesCS6B01G389000	chrUn	87.156	109	10	3	6336	6442	150795951	150796057	3.900000e-23	121.0
120	TraesCS6B01G389000	chrUn	86.726	113	10	4	6336	6445	301836922	301837032	3.900000e-23	121.0
121	TraesCS6B01G389000	chrUn	86.364	110	13	2	6335	6443	26086813	26086921	1.400000e-22	119.0
122	TraesCS6B01G389000	chrUn	92.771	83	4	2	6364	6445	70385155	70385236	1.400000e-22	119.0
123	TraesCS6B01G389000	chrUn	86.364	110	13	2	6335	6443	322494974	322495082	1.400000e-22	119.0
124	TraesCS6B01G389000	chrUn	86.486	111	11	4	6333	6441	328262772	328262880	1.400000e-22	119.0
125	TraesCS6B01G389000	chrUn	86.364	110	13	2	6335	6443	346765694	346765802	1.400000e-22	119.0
126	TraesCS6B01G389000	chrUn	85.345	116	14	3	6336	6449	15981827	15981941	5.040000e-22	117.0
127	TraesCS6B01G389000	chr5D	85.000	200	20	5	2858	3055	429817133	429816942	2.260000e-45	195.0
128	TraesCS6B01G389000	chr5D	89.908	109	11	0	6335	6443	391376880	391376988	2.990000e-29	141.0
129	TraesCS6B01G389000	chr5D	88.991	109	12	0	6336	6444	293784598	293784490	1.390000e-27	135.0
130	TraesCS6B01G389000	chr4D	89.091	110	12	0	6333	6442	261757901	261758010	3.870000e-28	137.0
131	TraesCS6B01G389000	chr4D	88.785	107	12	0	6336	6442	474591323	474591217	1.800000e-26	132.0
132	TraesCS6B01G389000	chr4D	88.073	109	13	0	6334	6442	501164107	501163999	6.480000e-26	130.0

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS6B01G389000	chr6B	664063459	664071409	7950	True	4199.333333	4658	100.000000	1	7951	3	chr6B.!!$R8	7950
1	TraesCS6B01G389000	chr6B	664022764	664026814	4050	True	1039.200000	2612	92.072000	878	7951	4	chr6B.!!$R7	7073
2	TraesCS6B01G389000	chr6B	26397559	26398359	800	True	379.000000	379	75.646000	6932	7729	1	chr6B.!!$R2	797
3	TraesCS6B01G389000	chr6A	419773292	419774090	798	True	1182.000000	1182	93.392000	1560	2359	1	chr6A.!!$R4	799
4	TraesCS6B01G389000	chr6A	587691472	587693673	2201	True	919.666667	1923	90.661000	3456	7951	3	chr6A.!!$R6	4495
5	TraesCS6B01G389000	chr6A	587698074	587698732	658	True	710.000000	710	86.152000	859	1537	1	chr6A.!!$R5	678
6	TraesCS6B01G389000	chr6A	587744371	587750069	5698	True	702.620000	1465	85.771600	225	7951	5	chr6A.!!$R7	7726
7	TraesCS6B01G389000	chr6D	438836653	438839694	3041	True	979.333333	1358	93.107333	878	7671	3	chr6D.!!$R8	6793
8	TraesCS6B01G389000	chr6D	14934409	14935211	802	False	394.000000	394	75.892000	6930	7729	1	chr6D.!!$F1	799
9	TraesCS6B01G389000	chr2D	558787864	558788659	795	False	1199.000000	1199	93.860000	1559	2354	1	chr2D.!!$F2	795
10	TraesCS6B01G389000	chr1D	233886414	233887213	799	False	1188.000000	1188	93.500000	1562	2359	1	chr1D.!!$F1	797
11	TraesCS6B01G389000	chr1D	483692474	483693208	734	True	385.000000	385	76.383000	6999	7730	1	chr1D.!!$R4	731
12	TraesCS6B01G389000	chr1D	483873210	483875270	2060	True	260.500000	363	76.839000	3498	7730	2	chr1D.!!$R5	4232
13	TraesCS6B01G389000	chr3D	20702649	20703447	798	False	1182.000000	1182	93.383000	1561	2359	1	chr3D.!!$F1	798
14	TraesCS6B01G389000	chr3D	268943035	268945176	2141	True	503.666667	638	93.771333	4025	5782	3	chr3D.!!$R3	1757
15	TraesCS6B01G389000	chr3B	829032546	829033342	796	True	1177.000000	1177	93.350000	1564	2358	1	chr3B.!!$R4	794
16	TraesCS6B01G389000	chr1A	78541963	78542762	799	True	1177.000000	1177	93.258000	1561	2359	1	chr1A.!!$R1	798
17	TraesCS6B01G389000	chr1A	580741021	580741805	784	True	388.000000	388	75.849000	6943	7730	1	chr1A.!!$R4	787
18	TraesCS6B01G389000	chr1A	580662190	580662907	717	True	281.000000	281	74.003000	6935	7655	1	chr1A.!!$R3	720
19	TraesCS6B01G389000	chr1A	580568087	580572070	3983	True	260.000000	346	77.284500	3498	7730	2	chr1A.!!$R6	4232
20	TraesCS6B01G389000	chr1A	580584744	580586687	1943	True	236.000000	318	77.164500	3498	7655	2	chr1A.!!$R7	4157
21	TraesCS6B01G389000	chr5B	38148262	38149062	800	False	1175.000000	1175	93.069000	1553	2359	1	chr5B.!!$F1	806
22	TraesCS6B01G389000	chr2B	667256036	667256833	797	False	1175.000000	1175	93.258000	1560	2358	1	chr2B.!!$F1	798
23	TraesCS6B01G389000	chr1B	5992908	5993704	796	False	1175.000000	1175	93.258000	1561	2359	1	chr1B.!!$F1	798
24	TraesCS6B01G389000	chr5A	313876006	313876611	605	True	514.000000	621	94.376000	4025	4669	2	chr5A.!!$R2	644
25	TraesCS6B01G389000	chr4B	73278020	73279625	1605	False	535.500000	616	93.483500	4025	5782	2	chr4B.!!$F2	1757
26	TraesCS6B01G389000	chr4A	729746143	729746949	806	False	436.000000	436	76.773000	6926	7730	1	chr4A.!!$F1	804
27	TraesCS6B01G389000	chr7D	10038720	10039482	762	False	409.000000	409	76.645000	6926	7690	1	chr7D.!!$F2	764

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
59	60	0.036010	CCGTGCTCCCACTTCATCTT	60.036	55.0	0.00	0.00	39.86	2.40	F
643	647	0.037232	ACCCTGCAAACTCTACGCTC	60.037	55.0	0.00	0.00	0.00	5.03	F
665	669	0.107214	CACTCCACACCCGGCAATAT	60.107	55.0	0.00	0.00	0.00	1.28	F
1555	1774	0.033601	TTGCTTGTTGTGTCCCTGGT	60.034	50.0	0.00	0.00	0.00	4.00	F
2368	2796	0.252197	CTAGGGCCCAACACTACCAC	59.748	60.0	27.56	0.00	0.00	4.16	F
2975	3403	0.030705	TCTGGATGGAGGAAGGGGAG	60.031	60.0	0.00	0.00	0.00	4.30	F
3082	3510	0.038310	GCCTGGGCCAGAGTTTTACT	59.962	55.0	34.84	0.00	32.44	2.24	F
3397	3825	0.100325	TGCTTTGGTGTGCTTGTTCG	59.900	50.0	0.00	0.00	0.00	3.95	F
3402	3830	0.393132	TGGTGTGCTTGTTCGTTCCA	60.393	50.0	0.00	0.00	0.00	3.53	F
3405	3833	0.950836	TGTGCTTGTTCGTTCCATGG	59.049	50.0	4.97	4.97	0.00	3.66	F
4099	5020	1.489560	AAGGGTCGCTTGCTTAGGGT	61.490	55.0	0.57	0.00	37.99	4.34	F
5504	7572	0.326264	GGAGAAGGCATGGTGTCACT	59.674	55.0	2.35	0.00	0.00	3.41	F
5646	7714	0.107017	GTGTCCATGGGATCCAGGTG	60.107	60.0	15.23	8.59	36.75	4.00	F
5655	7723	0.107017	GGATCCAGGTGGTGTCCATG	60.107	60.0	6.95	0.00	39.31	3.66	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1544	1763	0.109723	GTAAAGCCACCAGGGACACA	59.890	55.000	0.00	0.0	40.01	3.72	R
1549	1768	0.250989	TTTCGGTAAAGCCACCAGGG	60.251	55.000	0.00	0.0	38.61	4.45	R
1984	2411	0.482446	TTGGTTTGGTGGCTGGATCT	59.518	50.000	0.00	0.0	0.00	2.75	R
2956	3384	0.030705	CTCCCCTTCCTCCATCCAGA	60.031	60.000	0.00	0.0	0.00	3.86	R
3195	3623	0.098376	CGGATCTGCTTTCTTGCTGC	59.902	55.000	0.00	0.0	32.95	5.25	R
4249	5381	1.207089	TGTTATGGCGCTGCTAGAAGT	59.793	47.619	7.64	0.0	0.00	3.01	R
4403	5535	2.102357	AGCGACGCGGTGTAGATG	59.898	61.111	15.18	0.0	35.85	2.90	R
4459	5591	4.408821	GCATCTGGGTGGTGGCGA	62.409	66.667	0.00	0.0	0.00	5.54	R
5436	7504	4.475135	GGGAAGAGTGGCGGGCTC	62.475	72.222	2.38	0.0	0.00	4.70	R
5442	7510	2.743928	CGCACAGGGAAGAGTGGC	60.744	66.667	0.00	0.0	36.29	5.01	R
5647	7715	0.107017	CACCTGGATCCCATGGACAC	60.107	60.000	15.22	3.3	32.98	3.67	R
6830	10979	0.101399	AAAACACGCCGCACAAATGA	59.899	45.000	0.00	0.0	0.00	2.57	R
6839	10988	0.596082	ATCTTGGGAAAAACACGCCG	59.404	50.000	0.00	0.0	0.00	6.46	R
7313	11492	1.551329	GGGGTTTATGGCAAACTGGGA	60.551	52.381	0.00	0.0	0.00	4.37	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
17	18	2.830370	CTTGGGATCCGGCTTGCC	60.830	66.667	5.45	1.50	0.00	4.52
18	19	3.338250	TTGGGATCCGGCTTGCCT	61.338	61.111	14.28	0.00	0.00	4.75
19	20	3.643595	TTGGGATCCGGCTTGCCTG	62.644	63.158	14.28	3.29	0.00	4.85
21	22	4.496336	GGATCCGGCTTGCCTGCT	62.496	66.667	10.12	0.00	0.00	4.24
22	23	2.439156	GATCCGGCTTGCCTGCTT	60.439	61.111	10.12	0.00	0.00	3.91
23	24	2.439156	ATCCGGCTTGCCTGCTTC	60.439	61.111	10.12	0.00	0.00	3.86
24	25	4.722700	TCCGGCTTGCCTGCTTCC	62.723	66.667	10.12	0.00	0.00	3.46
25	26	4.729918	CCGGCTTGCCTGCTTCCT	62.730	66.667	10.12	0.00	0.00	3.36
26	27	2.674380	CGGCTTGCCTGCTTCCTT	60.674	61.111	10.12	0.00	0.00	3.36
27	28	2.694760	CGGCTTGCCTGCTTCCTTC	61.695	63.158	10.12	0.00	0.00	3.46
28	29	2.346541	GGCTTGCCTGCTTCCTTCC	61.347	63.158	4.11	0.00	0.00	3.46
29	30	2.346541	GCTTGCCTGCTTCCTTCCC	61.347	63.158	0.00	0.00	0.00	3.97
30	31	1.075482	CTTGCCTGCTTCCTTCCCA	59.925	57.895	0.00	0.00	0.00	4.37
31	32	0.324091	CTTGCCTGCTTCCTTCCCAT	60.324	55.000	0.00	0.00	0.00	4.00
32	33	0.612732	TTGCCTGCTTCCTTCCCATG	60.613	55.000	0.00	0.00	0.00	3.66
33	34	2.421399	GCCTGCTTCCTTCCCATGC	61.421	63.158	0.00	0.00	0.00	4.06
34	35	1.305623	CCTGCTTCCTTCCCATGCT	59.694	57.895	0.00	0.00	0.00	3.79
35	36	0.750911	CCTGCTTCCTTCCCATGCTC	60.751	60.000	0.00	0.00	0.00	4.26
36	37	0.750911	CTGCTTCCTTCCCATGCTCC	60.751	60.000	0.00	0.00	0.00	4.70
37	38	1.454663	GCTTCCTTCCCATGCTCCC	60.455	63.158	0.00	0.00	0.00	4.30
38	39	2.001803	CTTCCTTCCCATGCTCCCA	58.998	57.895	0.00	0.00	0.00	4.37
39	40	0.554792	CTTCCTTCCCATGCTCCCAT	59.445	55.000	0.00	0.00	0.00	4.00
40	41	0.552848	TTCCTTCCCATGCTCCCATC	59.447	55.000	0.00	0.00	0.00	3.51
41	42	1.152368	CCTTCCCATGCTCCCATCC	59.848	63.158	0.00	0.00	0.00	3.51
42	43	1.228063	CTTCCCATGCTCCCATCCG	60.228	63.158	0.00	0.00	0.00	4.18
43	44	1.987807	CTTCCCATGCTCCCATCCGT	61.988	60.000	0.00	0.00	0.00	4.69
44	45	2.203252	CCCATGCTCCCATCCGTG	60.203	66.667	0.00	0.00	0.00	4.94
45	46	2.903855	CCATGCTCCCATCCGTGC	60.904	66.667	0.00	0.00	0.00	5.34
46	47	2.191375	CATGCTCCCATCCGTGCT	59.809	61.111	0.00	0.00	0.00	4.40
47	48	1.890979	CATGCTCCCATCCGTGCTC	60.891	63.158	0.00	0.00	0.00	4.26
48	49	3.112205	ATGCTCCCATCCGTGCTCC	62.112	63.158	0.00	0.00	0.00	4.70
49	50	4.554036	GCTCCCATCCGTGCTCCC	62.554	72.222	0.00	0.00	0.00	4.30
50	51	3.083349	CTCCCATCCGTGCTCCCA	61.083	66.667	0.00	0.00	0.00	4.37
51	52	3.391665	CTCCCATCCGTGCTCCCAC	62.392	68.421	0.00	0.00	38.62	4.61
52	53	3.402681	CCCATCCGTGCTCCCACT	61.403	66.667	0.00	0.00	39.86	4.00
53	54	2.671070	CCATCCGTGCTCCCACTT	59.329	61.111	0.00	0.00	39.86	3.16
54	55	1.450312	CCATCCGTGCTCCCACTTC	60.450	63.158	0.00	0.00	39.86	3.01
55	56	1.296392	CATCCGTGCTCCCACTTCA	59.704	57.895	0.00	0.00	39.86	3.02
56	57	0.107508	CATCCGTGCTCCCACTTCAT	60.108	55.000	0.00	0.00	39.86	2.57
57	58	0.179000	ATCCGTGCTCCCACTTCATC	59.821	55.000	0.00	0.00	39.86	2.92
58	59	0.904865	TCCGTGCTCCCACTTCATCT	60.905	55.000	0.00	0.00	39.86	2.90
59	60	0.036010	CCGTGCTCCCACTTCATCTT	60.036	55.000	0.00	0.00	39.86	2.40
60	61	1.207089	CCGTGCTCCCACTTCATCTTA	59.793	52.381	0.00	0.00	39.86	2.10
61	62	2.271800	CGTGCTCCCACTTCATCTTAC	58.728	52.381	0.00	0.00	39.86	2.34
62	63	2.271800	GTGCTCCCACTTCATCTTACG	58.728	52.381	0.00	0.00	38.93	3.18
63	64	1.207089	TGCTCCCACTTCATCTTACGG	59.793	52.381	0.00	0.00	0.00	4.02
64	65	1.941325	CTCCCACTTCATCTTACGGC	58.059	55.000	0.00	0.00	0.00	5.68
65	66	1.482593	CTCCCACTTCATCTTACGGCT	59.517	52.381	0.00	0.00	0.00	5.52
66	67	1.207089	TCCCACTTCATCTTACGGCTG	59.793	52.381	0.00	0.00	0.00	4.85
67	68	1.066143	CCCACTTCATCTTACGGCTGT	60.066	52.381	2.42	2.42	0.00	4.40
68	69	2.271800	CCACTTCATCTTACGGCTGTC	58.728	52.381	0.00	0.00	0.00	3.51
69	70	2.271800	CACTTCATCTTACGGCTGTCC	58.728	52.381	0.00	0.00	0.00	4.02
70	71	2.093973	CACTTCATCTTACGGCTGTCCT	60.094	50.000	0.00	0.00	0.00	3.85
71	72	2.567615	ACTTCATCTTACGGCTGTCCTT	59.432	45.455	0.00	0.00	0.00	3.36
72	73	3.008049	ACTTCATCTTACGGCTGTCCTTT	59.992	43.478	0.00	0.00	0.00	3.11
73	74	3.695830	TCATCTTACGGCTGTCCTTTT	57.304	42.857	0.00	0.00	0.00	2.27
74	75	3.596214	TCATCTTACGGCTGTCCTTTTC	58.404	45.455	0.00	0.00	0.00	2.29
75	76	3.260884	TCATCTTACGGCTGTCCTTTTCT	59.739	43.478	0.00	0.00	0.00	2.52
76	77	3.314541	TCTTACGGCTGTCCTTTTCTC	57.685	47.619	0.00	0.00	0.00	2.87
77	78	2.897969	TCTTACGGCTGTCCTTTTCTCT	59.102	45.455	0.00	0.00	0.00	3.10
78	79	3.323979	TCTTACGGCTGTCCTTTTCTCTT	59.676	43.478	0.00	0.00	0.00	2.85
79	80	2.640316	ACGGCTGTCCTTTTCTCTTT	57.360	45.000	0.00	0.00	0.00	2.52
80	81	2.932261	ACGGCTGTCCTTTTCTCTTTT	58.068	42.857	0.00	0.00	0.00	2.27
81	82	3.288092	ACGGCTGTCCTTTTCTCTTTTT	58.712	40.909	0.00	0.00	0.00	1.94
82	83	3.315470	ACGGCTGTCCTTTTCTCTTTTTC	59.685	43.478	0.00	0.00	0.00	2.29
83	84	3.565902	CGGCTGTCCTTTTCTCTTTTTCT	59.434	43.478	0.00	0.00	0.00	2.52
84	85	4.036852	CGGCTGTCCTTTTCTCTTTTTCTT	59.963	41.667	0.00	0.00	0.00	2.52
85	86	5.450550	CGGCTGTCCTTTTCTCTTTTTCTTT	60.451	40.000	0.00	0.00	0.00	2.52
86	87	6.341316	GGCTGTCCTTTTCTCTTTTTCTTTT	58.659	36.000	0.00	0.00	0.00	2.27
87	88	6.477033	GGCTGTCCTTTTCTCTTTTTCTTTTC	59.523	38.462	0.00	0.00	0.00	2.29
88	89	7.261325	GCTGTCCTTTTCTCTTTTTCTTTTCT	58.739	34.615	0.00	0.00	0.00	2.52
89	90	8.406297	GCTGTCCTTTTCTCTTTTTCTTTTCTA	58.594	33.333	0.00	0.00	0.00	2.10
106	107	9.853177	TTCTTTTCTAATCTAATCATCTTCCCC	57.147	33.333	0.00	0.00	0.00	4.81
107	108	8.440771	TCTTTTCTAATCTAATCATCTTCCCCC	58.559	37.037	0.00	0.00	0.00	5.40
127	128	2.725221	CCCCCTCCTCTGATTTTCAG	57.275	55.000	0.00	0.00	45.59	3.02
128	129	1.213926	CCCCCTCCTCTGATTTTCAGG	59.786	57.143	4.78	0.00	44.39	3.86
129	130	1.213926	CCCCTCCTCTGATTTTCAGGG	59.786	57.143	4.78	1.10	44.51	4.45
136	137	1.635487	TCTGATTTTCAGGGAGTGGGG	59.365	52.381	4.78	0.00	44.39	4.96
137	138	0.039618	TGATTTTCAGGGAGTGGGGC	59.960	55.000	0.00	0.00	0.00	5.80
138	139	0.684479	GATTTTCAGGGAGTGGGGCC	60.684	60.000	0.00	0.00	0.00	5.80
139	140	2.499303	ATTTTCAGGGAGTGGGGCCG	62.499	60.000	0.00	0.00	0.00	6.13
152	153	4.678423	GGCCGGGCCTTATTTTCT	57.322	55.556	30.86	0.00	46.69	2.52
153	154	3.813080	GGCCGGGCCTTATTTTCTA	57.187	52.632	30.86	0.00	46.69	2.10
154	155	1.315690	GGCCGGGCCTTATTTTCTAC	58.684	55.000	30.86	0.00	46.69	2.59
155	156	1.315690	GCCGGGCCTTATTTTCTACC	58.684	55.000	8.12	0.00	0.00	3.18
156	157	1.409101	GCCGGGCCTTATTTTCTACCA	60.409	52.381	8.12	0.00	0.00	3.25
157	158	2.946791	GCCGGGCCTTATTTTCTACCAA	60.947	50.000	8.12	0.00	0.00	3.67
158	159	3.562182	CCGGGCCTTATTTTCTACCAAT	58.438	45.455	0.84	0.00	0.00	3.16
159	160	3.568430	CCGGGCCTTATTTTCTACCAATC	59.432	47.826	0.84	0.00	0.00	2.67
160	161	4.204012	CGGGCCTTATTTTCTACCAATCA	58.796	43.478	0.84	0.00	0.00	2.57
161	162	4.642885	CGGGCCTTATTTTCTACCAATCAA	59.357	41.667	0.84	0.00	0.00	2.57
162	163	5.126384	CGGGCCTTATTTTCTACCAATCAAA	59.874	40.000	0.84	0.00	0.00	2.69
163	164	6.183360	CGGGCCTTATTTTCTACCAATCAAAT	60.183	38.462	0.84	0.00	0.00	2.32
164	165	7.210174	GGGCCTTATTTTCTACCAATCAAATC	58.790	38.462	0.84	0.00	0.00	2.17
165	166	7.147742	GGGCCTTATTTTCTACCAATCAAATCA	60.148	37.037	0.84	0.00	0.00	2.57
166	167	8.257306	GGCCTTATTTTCTACCAATCAAATCAA	58.743	33.333	0.00	0.00	0.00	2.57
167	168	9.305925	GCCTTATTTTCTACCAATCAAATCAAG	57.694	33.333	0.00	0.00	0.00	3.02
168	169	9.305925	CCTTATTTTCTACCAATCAAATCAAGC	57.694	33.333	0.00	0.00	0.00	4.01
169	170	9.305925	CTTATTTTCTACCAATCAAATCAAGCC	57.694	33.333	0.00	0.00	0.00	4.35
170	171	6.662865	TTTTCTACCAATCAAATCAAGCCA	57.337	33.333	0.00	0.00	0.00	4.75
171	172	6.855763	TTTCTACCAATCAAATCAAGCCAT	57.144	33.333	0.00	0.00	0.00	4.40
172	173	5.840243	TCTACCAATCAAATCAAGCCATG	57.160	39.130	0.00	0.00	0.00	3.66
173	174	5.263599	TCTACCAATCAAATCAAGCCATGT	58.736	37.500	0.00	0.00	0.00	3.21
174	175	6.422333	TCTACCAATCAAATCAAGCCATGTA	58.578	36.000	0.00	0.00	0.00	2.29
175	176	5.329035	ACCAATCAAATCAAGCCATGTAC	57.671	39.130	0.00	0.00	0.00	2.90
176	177	4.771577	ACCAATCAAATCAAGCCATGTACA	59.228	37.500	0.00	0.00	0.00	2.90
177	178	5.104374	CCAATCAAATCAAGCCATGTACAC	58.896	41.667	0.00	0.00	0.00	2.90
178	179	4.621068	ATCAAATCAAGCCATGTACACG	57.379	40.909	0.00	0.00	0.00	4.49
179	180	2.746904	TCAAATCAAGCCATGTACACGG	59.253	45.455	2.89	2.89	0.00	4.94
180	181	1.750193	AATCAAGCCATGTACACGGG	58.250	50.000	10.48	10.43	0.00	5.28
181	182	0.908910	ATCAAGCCATGTACACGGGA	59.091	50.000	17.38	3.97	0.00	5.14
182	183	0.249120	TCAAGCCATGTACACGGGAG	59.751	55.000	17.38	7.72	0.00	4.30
183	184	1.078426	AAGCCATGTACACGGGAGC	60.078	57.895	17.38	7.72	0.00	4.70
184	185	1.836999	AAGCCATGTACACGGGAGCA	61.837	55.000	17.38	0.00	0.00	4.26
185	186	2.106683	GCCATGTACACGGGAGCAC	61.107	63.158	17.38	0.00	0.00	4.40
186	187	1.809619	CCATGTACACGGGAGCACG	60.810	63.158	9.32	0.00	40.31	5.34
187	188	1.809619	CATGTACACGGGAGCACGG	60.810	63.158	0.00	0.00	38.39	4.94
188	189	1.980232	ATGTACACGGGAGCACGGA	60.980	57.895	0.00	0.00	38.39	4.69
189	190	1.327690	ATGTACACGGGAGCACGGAT	61.328	55.000	0.00	0.00	38.39	4.18
190	191	1.518572	GTACACGGGAGCACGGATG	60.519	63.158	0.00	0.00	38.39	3.51
191	192	2.717044	TACACGGGAGCACGGATGG	61.717	63.158	0.00	0.00	38.39	3.51
192	193	4.838152	CACGGGAGCACGGATGGG	62.838	72.222	0.00	0.00	38.39	4.00
194	195	4.227134	CGGGAGCACGGATGGGAG	62.227	72.222	0.00	0.00	0.00	4.30
195	196	4.554036	GGGAGCACGGATGGGAGC	62.554	72.222	0.00	0.00	0.00	4.70
196	197	3.785859	GGAGCACGGATGGGAGCA	61.786	66.667	0.00	0.00	0.00	4.26
197	198	2.512515	GAGCACGGATGGGAGCAC	60.513	66.667	0.00	0.00	0.00	4.40
198	199	4.457496	AGCACGGATGGGAGCACG	62.457	66.667	0.00	0.00	0.00	5.34
200	201	4.838152	CACGGATGGGAGCACGGG	62.838	72.222	0.00	0.00	0.00	5.28
203	204	3.866582	GGATGGGAGCACGGGGAG	61.867	72.222	0.00	0.00	0.00	4.30
204	205	3.866582	GATGGGAGCACGGGGAGG	61.867	72.222	0.00	0.00	0.00	4.30
215	216	4.120755	GGGGAGGGAGCAGGCAAG	62.121	72.222	0.00	0.00	0.00	4.01
216	217	3.334054	GGGAGGGAGCAGGCAAGT	61.334	66.667	0.00	0.00	0.00	3.16
217	218	2.270527	GGAGGGAGCAGGCAAGTC	59.729	66.667	0.00	0.00	0.00	3.01
218	219	2.297129	GGAGGGAGCAGGCAAGTCT	61.297	63.158	0.00	0.00	0.00	3.24
219	220	1.220477	GAGGGAGCAGGCAAGTCTC	59.780	63.158	0.00	0.00	0.00	3.36
220	221	2.125350	GGGAGCAGGCAAGTCTCG	60.125	66.667	0.00	0.00	0.00	4.04
221	222	2.659610	GGAGCAGGCAAGTCTCGT	59.340	61.111	0.00	0.00	0.00	4.18
222	223	1.446966	GGAGCAGGCAAGTCTCGTC	60.447	63.158	0.00	0.00	0.00	4.20
223	224	1.446966	GAGCAGGCAAGTCTCGTCC	60.447	63.158	0.00	0.00	0.00	4.79
228	229	0.968393	AGGCAAGTCTCGTCCCTCTC	60.968	60.000	0.00	0.00	0.00	3.20
238	239	0.900647	CGTCCCTCTCCTTGGAGTGT	60.901	60.000	15.44	0.00	0.00	3.55
246	247	0.830444	TCCTTGGAGTGTACTGCCGT	60.830	55.000	1.00	0.00	32.95	5.68
258	259	2.376808	ACTGCCGTGAATCTCTCAAG	57.623	50.000	0.00	0.00	35.22	3.02
280	281	8.085296	TCAAGAATAAATAAAAAGCTTCCGCAA	58.915	29.630	0.00	0.00	39.10	4.85
283	284	9.435688	AGAATAAATAAAAAGCTTCCGCAAATT	57.564	25.926	0.00	0.00	39.10	1.82
299	300	6.826893	CGCAAATTTTGGGGAAATATAGTG	57.173	37.500	16.18	0.00	36.96	2.74
301	302	6.348498	GCAAATTTTGGGGAAATATAGTGCT	58.652	36.000	10.96	0.00	36.96	4.40
302	303	7.496747	GCAAATTTTGGGGAAATATAGTGCTA	58.503	34.615	10.96	0.00	36.96	3.49
303	304	7.984617	GCAAATTTTGGGGAAATATAGTGCTAA	59.015	33.333	10.96	0.00	36.96	3.09
318	322	2.677836	GTGCTAATGGTGCTCGAATCAA	59.322	45.455	0.00	0.00	0.00	2.57
327	331	3.557595	GGTGCTCGAATCAAGGATTACAG	59.442	47.826	0.00	0.00	31.89	2.74
332	336	2.874701	CGAATCAAGGATTACAGCAGGG	59.125	50.000	0.00	0.00	31.89	4.45
334	338	2.787473	TCAAGGATTACAGCAGGGTG	57.213	50.000	0.00	0.00	0.00	4.61
338	342	1.282157	AGGATTACAGCAGGGTGGAAC	59.718	52.381	0.00	0.00	0.00	3.62
348	352	3.844211	AGCAGGGTGGAACTGTAGATTTA	59.156	43.478	0.00	0.00	38.22	1.40
350	354	4.576463	GCAGGGTGGAACTGTAGATTTATG	59.424	45.833	0.00	0.00	38.22	1.90
351	355	5.629133	GCAGGGTGGAACTGTAGATTTATGA	60.629	44.000	0.00	0.00	38.22	2.15
358	362	7.716998	GTGGAACTGTAGATTTATGACATGGAT	59.283	37.037	0.00	0.00	0.00	3.41
370	374	5.864418	ATGACATGGATTTTGCTAAGCAT	57.136	34.783	0.00	0.00	38.76	3.79
372	376	4.705991	TGACATGGATTTTGCTAAGCATCA	59.294	37.500	0.00	0.00	38.76	3.07
394	398	4.631773	GCTCTCTGCATCAAGCCA	57.368	55.556	3.62	0.00	44.83	4.75
435	439	2.412089	GCAGACAAACGTAGCTTAGTGG	59.588	50.000	0.00	0.00	0.00	4.00
436	440	2.412089	CAGACAAACGTAGCTTAGTGGC	59.588	50.000	0.00	0.00	0.00	5.01
437	441	2.299297	AGACAAACGTAGCTTAGTGGCT	59.701	45.455	0.00	0.00	45.29	4.75
438	442	3.508793	AGACAAACGTAGCTTAGTGGCTA	59.491	43.478	0.00	0.00	42.97	3.93
467	471	2.162608	GTGAGCGAGACTAAGCTTGAGA	59.837	50.000	9.86	0.00	44.69	3.27
469	473	3.066064	TGAGCGAGACTAAGCTTGAGATC	59.934	47.826	9.86	1.11	44.69	2.75
473	477	5.008613	AGCGAGACTAAGCTTGAGATCTTAG	59.991	44.000	9.86	0.00	44.38	2.18
480	484	4.935352	AGCTTGAGATCTTAGTGGCTAG	57.065	45.455	0.00	0.00	0.00	3.42
482	486	5.450453	AGCTTGAGATCTTAGTGGCTAGTA	58.550	41.667	0.00	0.00	0.00	1.82
486	490	5.389520	TGAGATCTTAGTGGCTAGTAGCAT	58.610	41.667	23.24	11.11	44.75	3.79
487	491	6.543735	TGAGATCTTAGTGGCTAGTAGCATA	58.456	40.000	23.24	9.20	44.75	3.14
488	492	6.431543	TGAGATCTTAGTGGCTAGTAGCATAC	59.568	42.308	23.24	19.54	44.75	2.39
531	535	3.622060	TTAGACTTGGCAGGGCGGC	62.622	63.158	0.00	0.00	41.67	6.53
538	542	4.868116	GGCAGGGCGGCCGAATTA	62.868	66.667	33.48	0.00	45.40	1.40
539	543	2.594592	GCAGGGCGGCCGAATTAT	60.595	61.111	33.48	6.08	0.00	1.28
540	544	1.302192	GCAGGGCGGCCGAATTATA	60.302	57.895	33.48	0.00	0.00	0.98
542	546	1.086696	CAGGGCGGCCGAATTATATG	58.913	55.000	33.48	12.76	0.00	1.78
543	547	0.676782	AGGGCGGCCGAATTATATGC	60.677	55.000	33.48	7.21	0.00	3.14
544	548	1.654023	GGGCGGCCGAATTATATGCC	61.654	60.000	33.48	17.17	40.54	4.40
545	549	0.958382	GGCGGCCGAATTATATGCCA	60.958	55.000	33.48	0.00	44.22	4.92
546	550	1.094785	GCGGCCGAATTATATGCCAT	58.905	50.000	33.48	0.00	44.22	4.40
547	551	1.202177	GCGGCCGAATTATATGCCATG	60.202	52.381	33.48	0.00	44.22	3.66
548	552	1.202177	CGGCCGAATTATATGCCATGC	60.202	52.381	24.07	0.00	44.22	4.06
549	553	1.818060	GGCCGAATTATATGCCATGCA	59.182	47.619	0.00	0.00	43.46	3.96
550	554	2.415893	GGCCGAATTATATGCCATGCAC	60.416	50.000	0.00	0.00	43.04	4.57
551	555	2.228582	GCCGAATTATATGCCATGCACA	59.771	45.455	0.00	0.00	43.04	4.57
552	556	3.305267	GCCGAATTATATGCCATGCACAA	60.305	43.478	0.00	0.00	43.04	3.33
553	557	4.795635	GCCGAATTATATGCCATGCACAAA	60.796	41.667	0.00	0.00	43.04	2.83
561	565	1.479730	TGCCATGCACAAAACAAGTGA	59.520	42.857	0.00	0.00	39.30	3.41
606	610	4.571919	TCCCTTCCAATAACGTTGTACTG	58.428	43.478	11.99	0.00	0.00	2.74
614	618	6.379133	TCCAATAACGTTGTACTGGATCTACT	59.621	38.462	11.99	0.00	0.00	2.57
615	619	6.696148	CCAATAACGTTGTACTGGATCTACTC	59.304	42.308	11.99	0.00	0.00	2.59
616	620	4.715527	AACGTTGTACTGGATCTACTCC	57.284	45.455	0.00	0.00	45.19	3.85
626	630	1.757699	GGATCTACTCCACACTCCACC	59.242	57.143	0.00	0.00	44.26	4.61
627	631	1.757699	GATCTACTCCACACTCCACCC	59.242	57.143	0.00	0.00	0.00	4.61
628	632	0.784495	TCTACTCCACACTCCACCCT	59.216	55.000	0.00	0.00	0.00	4.34
629	633	0.898320	CTACTCCACACTCCACCCTG	59.102	60.000	0.00	0.00	0.00	4.45
630	634	1.192146	TACTCCACACTCCACCCTGC	61.192	60.000	0.00	0.00	0.00	4.85
631	635	2.447572	TCCACACTCCACCCTGCA	60.448	61.111	0.00	0.00	0.00	4.41
632	636	2.055689	CTCCACACTCCACCCTGCAA	62.056	60.000	0.00	0.00	0.00	4.08
633	637	1.152777	CCACACTCCACCCTGCAAA	60.153	57.895	0.00	0.00	0.00	3.68
634	638	1.455383	CCACACTCCACCCTGCAAAC	61.455	60.000	0.00	0.00	0.00	2.93
635	639	0.466189	CACACTCCACCCTGCAAACT	60.466	55.000	0.00	0.00	0.00	2.66
636	640	0.179018	ACACTCCACCCTGCAAACTC	60.179	55.000	0.00	0.00	0.00	3.01
637	641	0.109342	CACTCCACCCTGCAAACTCT	59.891	55.000	0.00	0.00	0.00	3.24
638	642	1.347707	CACTCCACCCTGCAAACTCTA	59.652	52.381	0.00	0.00	0.00	2.43
639	643	1.348036	ACTCCACCCTGCAAACTCTAC	59.652	52.381	0.00	0.00	0.00	2.59
640	644	0.320374	TCCACCCTGCAAACTCTACG	59.680	55.000	0.00	0.00	0.00	3.51
641	645	1.298859	CCACCCTGCAAACTCTACGC	61.299	60.000	0.00	0.00	0.00	4.42
642	646	0.320771	CACCCTGCAAACTCTACGCT	60.321	55.000	0.00	0.00	0.00	5.07
643	647	0.037232	ACCCTGCAAACTCTACGCTC	60.037	55.000	0.00	0.00	0.00	5.03
644	648	0.741221	CCCTGCAAACTCTACGCTCC	60.741	60.000	0.00	0.00	0.00	4.70
645	649	0.741221	CCTGCAAACTCTACGCTCCC	60.741	60.000	0.00	0.00	0.00	4.30
646	650	0.741221	CTGCAAACTCTACGCTCCCC	60.741	60.000	0.00	0.00	0.00	4.81
647	651	1.295423	GCAAACTCTACGCTCCCCA	59.705	57.895	0.00	0.00	0.00	4.96
648	652	1.019805	GCAAACTCTACGCTCCCCAC	61.020	60.000	0.00	0.00	0.00	4.61
649	653	0.608640	CAAACTCTACGCTCCCCACT	59.391	55.000	0.00	0.00	0.00	4.00
650	654	0.896226	AAACTCTACGCTCCCCACTC	59.104	55.000	0.00	0.00	0.00	3.51
651	655	0.971447	AACTCTACGCTCCCCACTCC	60.971	60.000	0.00	0.00	0.00	3.85
652	656	1.379977	CTCTACGCTCCCCACTCCA	60.380	63.158	0.00	0.00	0.00	3.86
653	657	1.668101	CTCTACGCTCCCCACTCCAC	61.668	65.000	0.00	0.00	0.00	4.02
654	658	1.982395	CTACGCTCCCCACTCCACA	60.982	63.158	0.00	0.00	0.00	4.17
655	659	2.227089	CTACGCTCCCCACTCCACAC	62.227	65.000	0.00	0.00	0.00	3.82
656	660	4.394712	CGCTCCCCACTCCACACC	62.395	72.222	0.00	0.00	0.00	4.16
657	661	4.035102	GCTCCCCACTCCACACCC	62.035	72.222	0.00	0.00	0.00	4.61
658	662	3.706373	CTCCCCACTCCACACCCG	61.706	72.222	0.00	0.00	0.00	5.28
662	666	4.263572	CCACTCCACACCCGGCAA	62.264	66.667	0.00	0.00	0.00	4.52
663	667	2.034066	CACTCCACACCCGGCAAT	59.966	61.111	0.00	0.00	0.00	3.56
664	668	1.298340	CACTCCACACCCGGCAATA	59.702	57.895	0.00	0.00	0.00	1.90
665	669	0.107214	CACTCCACACCCGGCAATAT	60.107	55.000	0.00	0.00	0.00	1.28
666	670	0.107214	ACTCCACACCCGGCAATATG	60.107	55.000	0.00	0.00	0.00	1.78
667	671	0.180171	CTCCACACCCGGCAATATGA	59.820	55.000	0.00	0.00	0.00	2.15
668	672	0.843309	TCCACACCCGGCAATATGAT	59.157	50.000	0.00	0.00	0.00	2.45
669	673	0.953727	CCACACCCGGCAATATGATG	59.046	55.000	0.00	0.00	0.00	3.07
670	674	1.476652	CCACACCCGGCAATATGATGA	60.477	52.381	0.00	0.00	0.00	2.92
671	675	1.875514	CACACCCGGCAATATGATGAG	59.124	52.381	0.00	0.00	0.00	2.90
672	676	1.490490	ACACCCGGCAATATGATGAGT	59.510	47.619	0.00	0.00	0.00	3.41
673	677	1.875514	CACCCGGCAATATGATGAGTG	59.124	52.381	0.00	0.00	0.00	3.51
674	678	1.202806	ACCCGGCAATATGATGAGTGG	60.203	52.381	0.00	0.00	0.00	4.00
675	679	1.527034	CCGGCAATATGATGAGTGGG	58.473	55.000	0.00	0.00	0.00	4.61
676	680	1.527034	CGGCAATATGATGAGTGGGG	58.473	55.000	0.00	0.00	0.00	4.96
677	681	1.072173	CGGCAATATGATGAGTGGGGA	59.928	52.381	0.00	0.00	0.00	4.81
678	682	2.787994	GGCAATATGATGAGTGGGGAG	58.212	52.381	0.00	0.00	0.00	4.30
679	683	2.107204	GGCAATATGATGAGTGGGGAGT	59.893	50.000	0.00	0.00	0.00	3.85
680	684	3.327757	GGCAATATGATGAGTGGGGAGTA	59.672	47.826	0.00	0.00	0.00	2.59
681	685	4.319177	GCAATATGATGAGTGGGGAGTAC	58.681	47.826	0.00	0.00	0.00	2.73
699	703	4.884247	AGTACTTTGTAAGAGCCAGACAC	58.116	43.478	0.00	0.00	0.00	3.67
722	726	1.732259	AGCATCGTCTTGGCTTAAACG	59.268	47.619	0.00	0.00	33.21	3.60
724	728	2.474032	GCATCGTCTTGGCTTAAACGAC	60.474	50.000	0.26	0.00	45.68	4.34
763	767	1.000233	AAATGCTCCCCCGATGCAA	60.000	52.632	0.00	0.00	40.24	4.08
833	840	1.866015	TGAATGTGGATCTCGAGGGT	58.134	50.000	13.56	1.24	0.00	4.34
850	857	8.217799	TCTCGAGGGTGGAAATAATATGAATTT	58.782	33.333	13.56	0.00	0.00	1.82
866	873	9.971922	AATATGAATTTAAAGGATTGCAGTAGC	57.028	29.630	0.00	0.00	42.57	3.58
985	1012	2.296073	AGTGAACCGAGAGAGGAAGT	57.704	50.000	0.00	0.00	34.73	3.01
994	1021	4.225717	ACCGAGAGAGGAAGTAGACTAAGT	59.774	45.833	0.00	0.00	34.73	2.24
1068	1095	2.358003	AGCAAGCTCACCACGCTC	60.358	61.111	0.00	0.00	36.56	5.03
1122	1149	2.572104	GAGGAAGGAGGTGGCTTTTCTA	59.428	50.000	0.00	0.00	0.00	2.10
1164	1191	1.219124	CGCTGCCCTTGAGAAGCTA	59.781	57.895	0.00	0.00	33.41	3.32
1169	1196	3.027412	CTGCCCTTGAGAAGCTAGAGTA	58.973	50.000	0.00	0.00	0.00	2.59
1182	1209	3.636300	AGCTAGAGTACATGGAGAAGCTG	59.364	47.826	0.00	0.00	37.65	4.24
1227	1254	0.826715	ACCATGTCAGGGAGATGTCG	59.173	55.000	11.25	0.00	32.41	4.35
1230	1257	2.630098	CCATGTCAGGGAGATGTCGTAT	59.370	50.000	0.00	0.00	32.41	3.06
1281	1308	1.349026	CAGGATATTGGAGGTGCCGAT	59.651	52.381	0.00	0.00	43.52	4.18
1326	1353	1.327690	AAAGGATGTCTCGGCGCCTA	61.328	55.000	26.68	13.77	0.00	3.93
1388	1415	2.575993	GCTCAAGGCTCTCGCAGA	59.424	61.111	0.00	0.00	38.10	4.26
1390	1417	1.357991	GCTCAAGGCTCTCGCAGAAC	61.358	60.000	0.00	0.00	38.10	3.01
1426	1453	5.362263	GGCGATTAAGGTACCACAAGATTA	58.638	41.667	15.94	0.00	0.00	1.75
1440	1467	3.011708	ACAAGATTATGGCACTTCCCCTT	59.988	43.478	0.00	0.00	0.00	3.95
1441	1468	3.584733	AGATTATGGCACTTCCCCTTC	57.415	47.619	0.00	0.00	0.00	3.46
1442	1469	2.175715	AGATTATGGCACTTCCCCTTCC	59.824	50.000	0.00	0.00	0.00	3.46
1443	1470	1.681229	TTATGGCACTTCCCCTTCCT	58.319	50.000	0.00	0.00	0.00	3.36
1444	1471	1.681229	TATGGCACTTCCCCTTCCTT	58.319	50.000	0.00	0.00	0.00	3.36
1445	1472	0.786435	ATGGCACTTCCCCTTCCTTT	59.214	50.000	0.00	0.00	0.00	3.11
1451	1571	3.182152	CACTTCCCCTTCCTTTCTCCTA	58.818	50.000	0.00	0.00	0.00	2.94
1452	1572	3.055021	CACTTCCCCTTCCTTTCTCCTAC	60.055	52.174	0.00	0.00	0.00	3.18
1480	1607	0.631753	TTCTCTCTCCCAGATCCGGT	59.368	55.000	0.00	0.00	0.00	5.28
1486	1613	3.411517	CCCAGATCCGGTGGCCTT	61.412	66.667	3.32	0.00	33.24	4.35
1516	1643	2.365768	GGTGAGAGAGGGGGTCCC	60.366	72.222	0.00	0.00	45.90	4.46
1537	1756	3.057734	CGTGCTCCTCTTCGTTAGTTTT	58.942	45.455	0.00	0.00	0.00	2.43
1539	1758	2.806244	TGCTCCTCTTCGTTAGTTTTGC	59.194	45.455	0.00	0.00	0.00	3.68
1540	1759	3.067833	GCTCCTCTTCGTTAGTTTTGCT	58.932	45.455	0.00	0.00	0.00	3.91
1541	1760	3.498777	GCTCCTCTTCGTTAGTTTTGCTT	59.501	43.478	0.00	0.00	0.00	3.91
1542	1761	4.611581	GCTCCTCTTCGTTAGTTTTGCTTG	60.612	45.833	0.00	0.00	0.00	4.01
1543	1762	4.448210	TCCTCTTCGTTAGTTTTGCTTGT	58.552	39.130	0.00	0.00	0.00	3.16
1544	1763	4.879545	TCCTCTTCGTTAGTTTTGCTTGTT	59.120	37.500	0.00	0.00	0.00	2.83
1547	1766	5.328691	TCTTCGTTAGTTTTGCTTGTTGTG	58.671	37.500	0.00	0.00	0.00	3.33
1548	1767	4.688511	TCGTTAGTTTTGCTTGTTGTGT	57.311	36.364	0.00	0.00	0.00	3.72
1549	1768	4.654015	TCGTTAGTTTTGCTTGTTGTGTC	58.346	39.130	0.00	0.00	0.00	3.67
1550	1769	3.789224	CGTTAGTTTTGCTTGTTGTGTCC	59.211	43.478	0.00	0.00	0.00	4.02
1551	1770	2.959507	AGTTTTGCTTGTTGTGTCCC	57.040	45.000	0.00	0.00	0.00	4.46
1553	1772	2.166254	AGTTTTGCTTGTTGTGTCCCTG	59.834	45.455	0.00	0.00	0.00	4.45
1554	1773	1.110442	TTTGCTTGTTGTGTCCCTGG	58.890	50.000	0.00	0.00	0.00	4.45
1555	1774	0.033601	TTGCTTGTTGTGTCCCTGGT	60.034	50.000	0.00	0.00	0.00	4.00
1556	1775	0.751277	TGCTTGTTGTGTCCCTGGTG	60.751	55.000	0.00	0.00	0.00	4.17
1557	1776	1.455383	GCTTGTTGTGTCCCTGGTGG	61.455	60.000	0.00	0.00	0.00	4.61
1836	2261	1.372997	GACGACGCTGCTTCCAAGA	60.373	57.895	0.17	0.00	0.00	3.02
1838	2263	1.373497	CGACGCTGCTTCCAAGAGT	60.373	57.895	0.17	0.00	0.00	3.24
1968	2395	1.853095	TTTCCCCGATCCCAACCCA	60.853	57.895	0.00	0.00	0.00	4.51
2040	2467	3.492353	CGGTCATGAGGCCCCCAT	61.492	66.667	0.00	0.00	0.00	4.00
2095	2522	0.458543	GCGACGAAGAATCAGAGCCA	60.459	55.000	0.00	0.00	0.00	4.75
2100	2527	1.472376	CGAAGAATCAGAGCCAGGACC	60.472	57.143	0.00	0.00	0.00	4.46
2177	2604	1.915614	GCCATCCGGATGCAATAGCG	61.916	60.000	34.77	21.51	46.23	4.26
2302	2730	0.827925	ATATTCGAGCCGCTCCTCCA	60.828	55.000	14.85	0.00	0.00	3.86
2334	2762	1.007271	CAGACAACGAGACCACGCT	60.007	57.895	0.00	0.00	36.70	5.07
2363	2791	3.717294	CCGCTAGGGCCCAACACT	61.717	66.667	27.56	4.81	34.44	3.55
2364	2792	2.363975	CCGCTAGGGCCCAACACTA	61.364	63.158	27.56	5.96	34.44	2.74
2365	2793	1.153429	CGCTAGGGCCCAACACTAC	60.153	63.158	27.56	4.63	34.44	2.73
2366	2794	1.223763	GCTAGGGCCCAACACTACC	59.776	63.158	27.56	0.00	0.00	3.18
2367	2795	1.559065	GCTAGGGCCCAACACTACCA	61.559	60.000	27.56	0.00	0.00	3.25
2368	2796	0.252197	CTAGGGCCCAACACTACCAC	59.748	60.000	27.56	0.00	0.00	4.16
2369	2797	0.474079	TAGGGCCCAACACTACCACA	60.474	55.000	27.56	0.00	0.00	4.17
2370	2798	1.602605	GGGCCCAACACTACCACAC	60.603	63.158	19.95	0.00	0.00	3.82
2371	2799	1.602605	GGCCCAACACTACCACACC	60.603	63.158	0.00	0.00	0.00	4.16
2372	2800	1.964373	GCCCAACACTACCACACCG	60.964	63.158	0.00	0.00	0.00	4.94
2373	2801	1.964373	CCCAACACTACCACACCGC	60.964	63.158	0.00	0.00	0.00	5.68
2374	2802	1.964373	CCAACACTACCACACCGCC	60.964	63.158	0.00	0.00	0.00	6.13
2375	2803	1.964373	CAACACTACCACACCGCCC	60.964	63.158	0.00	0.00	0.00	6.13
2376	2804	3.186656	AACACTACCACACCGCCCC	62.187	63.158	0.00	0.00	0.00	5.80
2377	2805	4.752879	CACTACCACACCGCCCCG	62.753	72.222	0.00	0.00	0.00	5.73
2889	3317	4.862823	GGGGAGACGGGGGAGGAG	62.863	77.778	0.00	0.00	0.00	3.69
2890	3318	4.862823	GGGAGACGGGGGAGGAGG	62.863	77.778	0.00	0.00	0.00	4.30
2891	3319	4.862823	GGAGACGGGGGAGGAGGG	62.863	77.778	0.00	0.00	0.00	4.30
2892	3320	4.862823	GAGACGGGGGAGGAGGGG	62.863	77.778	0.00	0.00	0.00	4.79
2907	3335	2.284405	GGGACCCACGGGAGAAGA	60.284	66.667	9.72	0.00	38.96	2.87
2908	3336	2.359967	GGGACCCACGGGAGAAGAG	61.360	68.421	9.72	0.00	38.96	2.85
2909	3337	2.579738	GACCCACGGGAGAAGAGC	59.420	66.667	9.72	0.00	38.96	4.09
2910	3338	1.985116	GACCCACGGGAGAAGAGCT	60.985	63.158	9.72	0.00	38.96	4.09
2911	3339	1.950973	GACCCACGGGAGAAGAGCTC	61.951	65.000	9.72	5.27	43.17	4.09
2912	3340	2.492090	CCACGGGAGAAGAGCTCG	59.508	66.667	8.37	0.00	44.91	5.03
2913	3341	2.046864	CCACGGGAGAAGAGCTCGA	61.047	63.158	8.37	0.00	44.91	4.04
2914	3342	1.431440	CACGGGAGAAGAGCTCGAG	59.569	63.158	8.45	8.45	44.91	4.04
2915	3343	2.411290	CGGGAGAAGAGCTCGAGC	59.589	66.667	30.01	30.01	44.91	5.03
2963	3391	2.356793	GCGAGGCGGATCTGGATG	60.357	66.667	3.14	0.00	0.00	3.51
2964	3392	2.341543	CGAGGCGGATCTGGATGG	59.658	66.667	3.14	0.00	0.00	3.51
2965	3393	2.203082	CGAGGCGGATCTGGATGGA	61.203	63.158	3.14	0.00	0.00	3.41
2966	3394	1.670590	GAGGCGGATCTGGATGGAG	59.329	63.158	3.14	0.00	0.00	3.86
2967	3395	1.825281	GAGGCGGATCTGGATGGAGG	61.825	65.000	3.14	0.00	0.00	4.30
2968	3396	1.838846	GGCGGATCTGGATGGAGGA	60.839	63.158	3.14	0.00	0.00	3.71
2969	3397	1.410850	GGCGGATCTGGATGGAGGAA	61.411	60.000	3.14	0.00	0.00	3.36
2970	3398	0.034616	GCGGATCTGGATGGAGGAAG	59.965	60.000	3.14	0.00	0.00	3.46
2971	3399	0.683973	CGGATCTGGATGGAGGAAGG	59.316	60.000	0.00	0.00	0.00	3.46
2972	3400	1.063183	GGATCTGGATGGAGGAAGGG	58.937	60.000	0.00	0.00	0.00	3.95
2973	3401	1.063183	GATCTGGATGGAGGAAGGGG	58.937	60.000	0.00	0.00	0.00	4.79
2974	3402	0.649992	ATCTGGATGGAGGAAGGGGA	59.350	55.000	0.00	0.00	0.00	4.81
2975	3403	0.030705	TCTGGATGGAGGAAGGGGAG	60.031	60.000	0.00	0.00	0.00	4.30
2976	3404	1.004758	TGGATGGAGGAAGGGGAGG	59.995	63.158	0.00	0.00	0.00	4.30
2977	3405	1.772156	GGATGGAGGAAGGGGAGGG	60.772	68.421	0.00	0.00	0.00	4.30
2978	3406	2.368878	ATGGAGGAAGGGGAGGGC	60.369	66.667	0.00	0.00	0.00	5.19
2981	3409	4.798682	GAGGAAGGGGAGGGCGGA	62.799	72.222	0.00	0.00	0.00	5.54
2982	3410	4.348495	AGGAAGGGGAGGGCGGAA	62.348	66.667	0.00	0.00	0.00	4.30
2983	3411	3.798511	GGAAGGGGAGGGCGGAAG	61.799	72.222	0.00	0.00	0.00	3.46
2984	3412	3.798511	GAAGGGGAGGGCGGAAGG	61.799	72.222	0.00	0.00	0.00	3.46
3041	3469	3.368501	CAGGAGGGGAGGAGGGGA	61.369	72.222	0.00	0.00	0.00	4.81
3042	3470	2.543637	AGGAGGGGAGGAGGGGAA	60.544	66.667	0.00	0.00	0.00	3.97
3043	3471	2.191846	AGGAGGGGAGGAGGGGAAA	61.192	63.158	0.00	0.00	0.00	3.13
3044	3472	2.001838	GGAGGGGAGGAGGGGAAAC	61.002	68.421	0.00	0.00	0.00	2.78
3057	3485	2.209475	GGAAACCCTAGCGCCTAGT	58.791	57.895	2.29	0.00	32.62	2.57
3058	3486	0.104487	GGAAACCCTAGCGCCTAGTC	59.896	60.000	2.29	0.00	32.62	2.59
3059	3487	0.248949	GAAACCCTAGCGCCTAGTCG	60.249	60.000	2.29	0.00	32.62	4.18
3081	3509	2.568003	GCCTGGGCCAGAGTTTTAC	58.432	57.895	34.84	10.61	32.44	2.01
3082	3510	0.038310	GCCTGGGCCAGAGTTTTACT	59.962	55.000	34.84	0.00	32.44	2.24
3083	3511	1.280998	GCCTGGGCCAGAGTTTTACTA	59.719	52.381	34.84	0.00	32.44	1.82
3084	3512	2.940083	GCCTGGGCCAGAGTTTTACTAC	60.940	54.545	34.84	6.71	32.44	2.73
3085	3513	2.572104	CCTGGGCCAGAGTTTTACTACT	59.428	50.000	34.84	0.00	32.44	2.57
3086	3514	3.600388	CTGGGCCAGAGTTTTACTACTG	58.400	50.000	29.96	0.00	32.44	2.74
3087	3515	2.290071	TGGGCCAGAGTTTTACTACTGC	60.290	50.000	0.00	0.00	0.00	4.40
3088	3516	2.000447	GGCCAGAGTTTTACTACTGCG	59.000	52.381	0.00	0.00	0.00	5.18
3089	3517	2.000447	GCCAGAGTTTTACTACTGCGG	59.000	52.381	0.00	0.00	0.00	5.69
3090	3518	2.000447	CCAGAGTTTTACTACTGCGGC	59.000	52.381	0.00	0.00	0.00	6.53
3091	3519	1.654105	CAGAGTTTTACTACTGCGGCG	59.346	52.381	0.51	0.51	0.00	6.46
3092	3520	0.369248	GAGTTTTACTACTGCGGCGC	59.631	55.000	27.44	27.44	0.00	6.53
3093	3521	1.058284	GTTTTACTACTGCGGCGCG	59.942	57.895	28.09	22.98	0.00	6.86
3111	3539	3.835134	CCTCCCCTGGTGGCTTTA	58.165	61.111	0.00	0.00	29.27	1.85
3112	3540	1.609783	CCTCCCCTGGTGGCTTTAG	59.390	63.158	0.00	0.00	29.27	1.85
3113	3541	1.609783	CTCCCCTGGTGGCTTTAGG	59.390	63.158	0.00	0.00	0.00	2.69
3114	3542	0.914417	CTCCCCTGGTGGCTTTAGGA	60.914	60.000	0.00	0.00	33.33	2.94
3115	3543	0.253630	TCCCCTGGTGGCTTTAGGAT	60.254	55.000	0.00	0.00	33.33	3.24
3116	3544	0.631212	CCCCTGGTGGCTTTAGGATT	59.369	55.000	0.00	0.00	33.33	3.01
3117	3545	1.007118	CCCCTGGTGGCTTTAGGATTT	59.993	52.381	0.00	0.00	33.33	2.17
3118	3546	2.559705	CCCCTGGTGGCTTTAGGATTTT	60.560	50.000	0.00	0.00	33.33	1.82
3119	3547	3.309556	CCCCTGGTGGCTTTAGGATTTTA	60.310	47.826	0.00	0.00	33.33	1.52
3120	3548	3.699538	CCCTGGTGGCTTTAGGATTTTAC	59.300	47.826	0.00	0.00	33.33	2.01
3121	3549	3.699538	CCTGGTGGCTTTAGGATTTTACC	59.300	47.826	0.00	0.00	33.33	2.85
3122	3550	3.699538	CTGGTGGCTTTAGGATTTTACCC	59.300	47.826	0.00	0.00	0.00	3.69
3123	3551	3.335484	TGGTGGCTTTAGGATTTTACCCT	59.665	43.478	0.00	0.00	37.80	4.34
3124	3552	3.952323	GGTGGCTTTAGGATTTTACCCTC	59.048	47.826	0.00	0.00	35.30	4.30
3125	3553	3.952323	GTGGCTTTAGGATTTTACCCTCC	59.048	47.826	0.00	0.00	35.30	4.30
3126	3554	3.053170	TGGCTTTAGGATTTTACCCTCCC	60.053	47.826	0.00	0.00	35.30	4.30
3127	3555	3.211865	GCTTTAGGATTTTACCCTCCCG	58.788	50.000	0.00	0.00	35.30	5.14
3128	3556	3.816994	CTTTAGGATTTTACCCTCCCGG	58.183	50.000	0.00	0.00	35.30	5.73
3129	3557	2.873053	TAGGATTTTACCCTCCCGGA	57.127	50.000	0.73	0.00	35.30	5.14
3130	3558	1.975471	AGGATTTTACCCTCCCGGAA	58.025	50.000	0.73	0.00	34.64	4.30
3131	3559	2.499515	AGGATTTTACCCTCCCGGAAT	58.500	47.619	0.73	0.00	34.64	3.01
3132	3560	3.672211	AGGATTTTACCCTCCCGGAATA	58.328	45.455	0.73	0.00	34.64	1.75
3133	3561	4.049318	AGGATTTTACCCTCCCGGAATAA	58.951	43.478	0.73	0.00	34.64	1.40
3134	3562	4.479425	AGGATTTTACCCTCCCGGAATAAA	59.521	41.667	0.73	0.00	34.64	1.40
3135	3563	4.581824	GGATTTTACCCTCCCGGAATAAAC	59.418	45.833	0.73	0.00	34.64	2.01
3136	3564	4.654389	TTTTACCCTCCCGGAATAAACA	57.346	40.909	0.73	0.00	34.64	2.83
3137	3565	4.654389	TTTACCCTCCCGGAATAAACAA	57.346	40.909	0.73	0.00	34.64	2.83
3138	3566	2.801077	ACCCTCCCGGAATAAACAAG	57.199	50.000	0.73	0.00	34.64	3.16
3139	3567	2.271777	ACCCTCCCGGAATAAACAAGA	58.728	47.619	0.73	0.00	34.64	3.02
3140	3568	2.850568	ACCCTCCCGGAATAAACAAGAT	59.149	45.455	0.73	0.00	34.64	2.40
3141	3569	3.118000	ACCCTCCCGGAATAAACAAGATC	60.118	47.826	0.73	0.00	34.64	2.75
3142	3570	3.136626	CCCTCCCGGAATAAACAAGATCT	59.863	47.826	0.73	0.00	0.00	2.75
3143	3571	4.130118	CCTCCCGGAATAAACAAGATCTG	58.870	47.826	0.73	0.00	0.00	2.90
3144	3572	4.130118	CTCCCGGAATAAACAAGATCTGG	58.870	47.826	0.73	0.00	37.95	3.86
3145	3573	2.618709	CCCGGAATAAACAAGATCTGGC	59.381	50.000	0.73	0.00	37.07	4.85
3146	3574	3.545703	CCGGAATAAACAAGATCTGGCT	58.454	45.455	0.00	0.00	31.96	4.75
3147	3575	3.947834	CCGGAATAAACAAGATCTGGCTT	59.052	43.478	0.00	0.00	31.96	4.35
3148	3576	4.399303	CCGGAATAAACAAGATCTGGCTTT	59.601	41.667	0.00	0.00	31.96	3.51
3149	3577	5.335127	CGGAATAAACAAGATCTGGCTTTG	58.665	41.667	0.00	0.00	0.00	2.77
3150	3578	5.106157	CGGAATAAACAAGATCTGGCTTTGT	60.106	40.000	0.00	0.00	0.00	2.83
3151	3579	6.570378	CGGAATAAACAAGATCTGGCTTTGTT	60.570	38.462	0.00	0.00	0.00	2.83
3152	3580	7.361713	CGGAATAAACAAGATCTGGCTTTGTTA	60.362	37.037	9.55	1.38	0.00	2.41
3153	3581	7.755373	GGAATAAACAAGATCTGGCTTTGTTAC	59.245	37.037	9.55	5.90	0.00	2.50
3154	3582	8.409358	AATAAACAAGATCTGGCTTTGTTACT	57.591	30.769	9.55	0.03	0.00	2.24
3155	3583	5.948992	AACAAGATCTGGCTTTGTTACTC	57.051	39.130	7.76	0.00	0.00	2.59
3156	3584	4.327680	ACAAGATCTGGCTTTGTTACTCC	58.672	43.478	0.00	0.00	0.00	3.85
3157	3585	4.042187	ACAAGATCTGGCTTTGTTACTCCT	59.958	41.667	0.00	0.00	0.00	3.69
3158	3586	4.479786	AGATCTGGCTTTGTTACTCCTC	57.520	45.455	0.00	0.00	0.00	3.71
3159	3587	3.198853	AGATCTGGCTTTGTTACTCCTCC	59.801	47.826	0.00	0.00	0.00	4.30
3160	3588	1.628846	TCTGGCTTTGTTACTCCTCCC	59.371	52.381	0.00	0.00	0.00	4.30
3161	3589	0.696501	TGGCTTTGTTACTCCTCCCC	59.303	55.000	0.00	0.00	0.00	4.81
3162	3590	0.992695	GGCTTTGTTACTCCTCCCCT	59.007	55.000	0.00	0.00	0.00	4.79
3163	3591	1.354705	GGCTTTGTTACTCCTCCCCTT	59.645	52.381	0.00	0.00	0.00	3.95
3164	3592	2.574824	GGCTTTGTTACTCCTCCCCTTA	59.425	50.000	0.00	0.00	0.00	2.69
3165	3593	3.009805	GGCTTTGTTACTCCTCCCCTTAA	59.990	47.826	0.00	0.00	0.00	1.85
3166	3594	4.325109	GGCTTTGTTACTCCTCCCCTTAAT	60.325	45.833	0.00	0.00	0.00	1.40
3167	3595	4.882427	GCTTTGTTACTCCTCCCCTTAATC	59.118	45.833	0.00	0.00	0.00	1.75
3168	3596	5.437946	CTTTGTTACTCCTCCCCTTAATCC	58.562	45.833	0.00	0.00	0.00	3.01
3169	3597	3.390819	TGTTACTCCTCCCCTTAATCCC	58.609	50.000	0.00	0.00	0.00	3.85
3170	3598	2.367894	GTTACTCCTCCCCTTAATCCCG	59.632	54.545	0.00	0.00	0.00	5.14
3171	3599	0.342313	ACTCCTCCCCTTAATCCCGT	59.658	55.000	0.00	0.00	0.00	5.28
3172	3600	1.049402	CTCCTCCCCTTAATCCCGTC	58.951	60.000	0.00	0.00	0.00	4.79
3173	3601	0.399519	TCCTCCCCTTAATCCCGTCC	60.400	60.000	0.00	0.00	0.00	4.79
3174	3602	0.693092	CCTCCCCTTAATCCCGTCCA	60.693	60.000	0.00	0.00	0.00	4.02
3175	3603	1.435256	CTCCCCTTAATCCCGTCCAT	58.565	55.000	0.00	0.00	0.00	3.41
3176	3604	1.072331	CTCCCCTTAATCCCGTCCATG	59.928	57.143	0.00	0.00	0.00	3.66
3177	3605	0.110486	CCCCTTAATCCCGTCCATGG	59.890	60.000	4.97	4.97	0.00	3.66
3178	3606	0.537371	CCCTTAATCCCGTCCATGGC	60.537	60.000	6.96	0.96	0.00	4.40
3179	3607	0.884704	CCTTAATCCCGTCCATGGCG	60.885	60.000	18.11	18.11	0.00	5.69
3187	3615	4.195334	GTCCATGGCGGCTGGGAT	62.195	66.667	21.26	0.00	34.36	3.85
3188	3616	4.193893	TCCATGGCGGCTGGGATG	62.194	66.667	21.39	12.37	34.36	3.51
3190	3618	4.193893	CATGGCGGCTGGGATGGA	62.194	66.667	11.43	0.00	0.00	3.41
3191	3619	3.419580	ATGGCGGCTGGGATGGAA	61.420	61.111	11.43	0.00	0.00	3.53
3192	3620	3.426309	ATGGCGGCTGGGATGGAAG	62.426	63.158	11.43	0.00	0.00	3.46
3193	3621	4.883354	GGCGGCTGGGATGGAAGG	62.883	72.222	0.00	0.00	0.00	3.46
3194	3622	4.883354	GCGGCTGGGATGGAAGGG	62.883	72.222	0.00	0.00	0.00	3.95
3195	3623	4.195334	CGGCTGGGATGGAAGGGG	62.195	72.222	0.00	0.00	0.00	4.79
3196	3624	4.529731	GGCTGGGATGGAAGGGGC	62.530	72.222	0.00	0.00	0.00	5.80
3197	3625	3.743017	GCTGGGATGGAAGGGGCA	61.743	66.667	0.00	0.00	0.00	5.36
3198	3626	2.599597	CTGGGATGGAAGGGGCAG	59.400	66.667	0.00	0.00	0.00	4.85
3199	3627	3.728292	CTGGGATGGAAGGGGCAGC	62.728	68.421	0.00	0.00	0.00	5.25
3200	3628	3.743017	GGGATGGAAGGGGCAGCA	61.743	66.667	0.00	0.00	0.00	4.41
3203	3631	1.304282	GATGGAAGGGGCAGCAAGA	59.696	57.895	0.00	0.00	0.00	3.02
3209	3637	1.183676	AAGGGGCAGCAAGAAAGCAG	61.184	55.000	0.00	0.00	36.85	4.24
3222	3650	1.977293	AAAGCAGATCCGAGGCCCTC	61.977	60.000	0.00	0.00	0.00	4.30
3224	3652	2.444706	CAGATCCGAGGCCCTCCA	60.445	66.667	4.85	0.00	33.74	3.86
3226	3654	3.551407	GATCCGAGGCCCTCCACC	61.551	72.222	4.85	0.00	33.74	4.61
3248	3676	0.375106	GCTATTGCAGCCGTCACTTC	59.625	55.000	0.00	0.00	45.23	3.01
3267	3695	0.107508	CGGATCCTTGGTCATGTGCT	60.108	55.000	10.75	0.00	0.00	4.40
3282	3710	2.683933	GCTCTCCTCCCCCGTGAA	60.684	66.667	0.00	0.00	0.00	3.18
3283	3711	3.020237	GCTCTCCTCCCCCGTGAAC	62.020	68.421	0.00	0.00	0.00	3.18
3284	3712	1.305381	CTCTCCTCCCCCGTGAACT	60.305	63.158	0.00	0.00	0.00	3.01
3285	3713	1.608717	CTCTCCTCCCCCGTGAACTG	61.609	65.000	0.00	0.00	0.00	3.16
3286	3714	2.606519	TCCTCCCCCGTGAACTGG	60.607	66.667	0.00	0.00	0.00	4.00
3287	3715	4.410400	CCTCCCCCGTGAACTGGC	62.410	72.222	0.00	0.00	0.00	4.85
3288	3716	4.410400	CTCCCCCGTGAACTGGCC	62.410	72.222	0.00	0.00	0.00	5.36
3292	3720	4.263572	CCCGTGAACTGGCCACCA	62.264	66.667	0.00	0.00	0.00	4.17
3293	3721	2.034066	CCGTGAACTGGCCACCAT	59.966	61.111	0.00	0.00	30.82	3.55
3294	3722	2.334946	CCGTGAACTGGCCACCATG	61.335	63.158	0.00	5.79	30.82	3.66
3295	3723	2.334946	CGTGAACTGGCCACCATGG	61.335	63.158	11.19	11.19	41.55	3.66
3296	3724	1.228552	GTGAACTGGCCACCATGGT	60.229	57.895	13.00	13.00	40.46	3.55
3297	3725	1.228521	TGAACTGGCCACCATGGTG	60.229	57.895	34.08	34.08	45.02	4.17
3307	3735	3.983420	CCATGGTGGTGGGCTGGT	61.983	66.667	2.57	0.00	35.55	4.00
3308	3736	2.677524	CATGGTGGTGGGCTGGTG	60.678	66.667	0.00	0.00	0.00	4.17
3309	3737	3.983420	ATGGTGGTGGGCTGGTGG	61.983	66.667	0.00	0.00	0.00	4.61
3333	3761	2.242043	CAGTTTTGGTGGAGGATTGCT	58.758	47.619	0.00	0.00	0.00	3.91
3335	3763	0.968405	TTTTGGTGGAGGATTGCTGC	59.032	50.000	0.00	0.00	0.00	5.25
3343	3771	1.679944	GGAGGATTGCTGCTGCTTGTA	60.680	52.381	17.00	0.39	40.48	2.41
3359	3787	3.545703	CTTGTACATGGATCTGAACCCC	58.454	50.000	0.00	0.00	0.00	4.95
3361	3789	2.505407	TGTACATGGATCTGAACCCCTG	59.495	50.000	1.16	2.34	0.00	4.45
3379	3807	5.189180	CCCCTGTTCTTTATCCTCTTCTTG	58.811	45.833	0.00	0.00	0.00	3.02
3390	3818	1.000938	CCTCTTCTTGCTTTGGTGTGC	60.001	52.381	0.00	0.00	0.00	4.57
3397	3825	0.100325	TGCTTTGGTGTGCTTGTTCG	59.900	50.000	0.00	0.00	0.00	3.95
3399	3827	1.469079	GCTTTGGTGTGCTTGTTCGTT	60.469	47.619	0.00	0.00	0.00	3.85
3400	3828	2.450160	CTTTGGTGTGCTTGTTCGTTC	58.550	47.619	0.00	0.00	0.00	3.95
3401	3829	0.736053	TTGGTGTGCTTGTTCGTTCC	59.264	50.000	0.00	0.00	0.00	3.62
3402	3830	0.393132	TGGTGTGCTTGTTCGTTCCA	60.393	50.000	0.00	0.00	0.00	3.53
3403	3831	0.951558	GGTGTGCTTGTTCGTTCCAT	59.048	50.000	0.00	0.00	0.00	3.41
3404	3832	1.334960	GGTGTGCTTGTTCGTTCCATG	60.335	52.381	0.00	0.00	0.00	3.66
3405	3833	0.950836	TGTGCTTGTTCGTTCCATGG	59.049	50.000	4.97	4.97	0.00	3.66
3407	3835	1.812571	GTGCTTGTTCGTTCCATGGAT	59.187	47.619	17.06	0.00	0.00	3.41
3408	3836	2.083774	TGCTTGTTCGTTCCATGGATC	58.916	47.619	17.06	14.27	0.00	3.36
3409	3837	2.290260	TGCTTGTTCGTTCCATGGATCT	60.290	45.455	17.06	0.00	0.00	2.75
3410	3838	2.096496	GCTTGTTCGTTCCATGGATCTG	59.904	50.000	17.06	11.18	0.00	2.90
3412	3840	3.694043	TGTTCGTTCCATGGATCTGAA	57.306	42.857	17.06	17.81	0.00	3.02
3439	3867	6.294397	CCCTGTTCTCTTTTCATCCTTCAAAG	60.294	42.308	0.00	0.00	0.00	2.77
3449	3877	2.568623	TCCTTCAAAGTCCCTTCAGC	57.431	50.000	0.00	0.00	0.00	4.26
3460	4173	3.073650	AGTCCCTTCAGCTCTTCAACATT	59.926	43.478	0.00	0.00	0.00	2.71
3461	4174	3.190118	GTCCCTTCAGCTCTTCAACATTG	59.810	47.826	0.00	0.00	0.00	2.82
3466	4179	2.294233	TCAGCTCTTCAACATTGGCAAC	59.706	45.455	0.00	0.00	0.00	4.17
3478	4191	3.569701	ACATTGGCAACTGTAACTTCCTG	59.430	43.478	0.00	0.00	37.61	3.86
3494	4207	9.162764	GTAACTTCCTGCTTTGACATTCTAATA	57.837	33.333	0.00	0.00	0.00	0.98
3579	4292	5.869344	CGGATTTCAGTGATCTACAAAGACA	59.131	40.000	0.00	0.00	33.57	3.41
3740	4456	3.889815	TGATCTCGAAGGGCAATTTGAT	58.110	40.909	0.00	0.00	0.00	2.57
3872	4608	7.106439	AGACATCATCGTCAACTTAGAGAAT	57.894	36.000	0.00	0.00	38.43	2.40
3883	4619	7.307751	CGTCAACTTAGAGAATACCTTGCAAAA	60.308	37.037	0.00	0.00	0.00	2.44
4099	5020	1.489560	AAGGGTCGCTTGCTTAGGGT	61.490	55.000	0.57	0.00	37.99	4.34
4108	5029	3.500680	CGCTTGCTTAGGGTTCAAGTAAA	59.499	43.478	0.00	0.00	39.36	2.01
4110	5031	4.519350	GCTTGCTTAGGGTTCAAGTAAACT	59.481	41.667	0.00	0.00	39.36	2.66
4374	5506	3.371097	CTGGCCATCTACACCGCGT	62.371	63.158	5.51	0.00	0.00	6.01
4408	5540	4.897357	CGCGCTGCTGGCCATCTA	62.897	66.667	5.51	0.00	37.74	1.98
4409	5541	3.275338	GCGCTGCTGGCCATCTAC	61.275	66.667	5.51	0.00	37.74	2.59
4410	5542	2.187685	CGCTGCTGGCCATCTACA	59.812	61.111	5.51	1.31	37.74	2.74
4411	5543	2.176273	CGCTGCTGGCCATCTACAC	61.176	63.158	5.51	0.00	37.74	2.90
4412	5544	1.821332	GCTGCTGGCCATCTACACC	60.821	63.158	5.51	0.00	34.27	4.16
4413	5545	1.522355	CTGCTGGCCATCTACACCG	60.522	63.158	5.51	0.00	0.00	4.94
4414	5546	2.897350	GCTGGCCATCTACACCGC	60.897	66.667	5.51	0.00	0.00	5.68
4415	5547	2.586079	CTGGCCATCTACACCGCG	60.586	66.667	5.51	0.00	0.00	6.46
4416	5548	3.371097	CTGGCCATCTACACCGCGT	62.371	63.158	5.51	0.00	0.00	6.01
4417	5549	2.585247	GGCCATCTACACCGCGTC	60.585	66.667	4.92	0.00	0.00	5.19
4418	5550	2.954868	GCCATCTACACCGCGTCG	60.955	66.667	4.92	0.00	0.00	5.12
4419	5551	2.954868	CCATCTACACCGCGTCGC	60.955	66.667	7.29	7.29	0.00	5.19
4420	5552	2.102357	CATCTACACCGCGTCGCT	59.898	61.111	16.36	0.00	0.00	4.93
4421	5553	2.102357	ATCTACACCGCGTCGCTG	59.898	61.111	16.36	11.71	0.00	5.18
4422	5554	4.771356	TCTACACCGCGTCGCTGC	62.771	66.667	16.36	0.00	0.00	5.25
5476	7544	2.780094	CGGTGCAAACCAACAGCCA	61.780	57.895	0.00	0.00	0.00	4.75
5504	7572	0.326264	GGAGAAGGCATGGTGTCACT	59.674	55.000	2.35	0.00	0.00	3.41
5593	7661	1.294659	CTCTTGCGACCACTTCCAGC	61.295	60.000	0.00	0.00	0.00	4.85
5645	7713	1.281925	GGTGTCCATGGGATCCAGGT	61.282	60.000	15.23	0.00	36.75	4.00
5646	7714	0.107017	GTGTCCATGGGATCCAGGTG	60.107	60.000	15.23	8.59	36.75	4.00
5647	7715	1.281199	TGTCCATGGGATCCAGGTGG	61.281	60.000	15.23	17.20	36.75	4.61
5648	7716	1.084652	TCCATGGGATCCAGGTGGT	59.915	57.895	21.72	0.00	35.71	4.16
5649	7717	1.228228	CCATGGGATCCAGGTGGTG	59.772	63.158	15.23	2.47	36.75	4.17
5650	7718	1.574526	CCATGGGATCCAGGTGGTGT	61.575	60.000	15.23	0.00	36.75	4.16
5651	7719	0.107017	CATGGGATCCAGGTGGTGTC	60.107	60.000	15.23	0.00	36.75	3.67
5652	7720	1.281925	ATGGGATCCAGGTGGTGTCC	61.282	60.000	15.23	12.20	36.75	4.02
5653	7721	1.923395	GGGATCCAGGTGGTGTCCA	60.923	63.158	15.23	0.00	40.40	4.02
5654	7722	1.281925	GGGATCCAGGTGGTGTCCAT	61.282	60.000	15.23	0.00	40.40	3.41
5655	7723	0.107017	GGATCCAGGTGGTGTCCATG	60.107	60.000	6.95	0.00	39.31	3.66
5656	7724	0.107017	GATCCAGGTGGTGTCCATGG	60.107	60.000	4.97	4.97	35.28	3.66
5657	7725	1.574526	ATCCAGGTGGTGTCCATGGG	61.575	60.000	13.02	0.00	35.28	4.00
5658	7726	2.230653	CCAGGTGGTGTCCATGGGA	61.231	63.158	13.02	0.00	35.28	4.37
5659	7727	1.574526	CCAGGTGGTGTCCATGGGAT	61.575	60.000	13.02	0.00	35.28	3.85
5660	7728	0.107017	CAGGTGGTGTCCATGGGATC	60.107	60.000	13.02	3.75	35.28	3.36
5661	7729	1.227383	GGTGGTGTCCATGGGATCC	59.773	63.158	13.02	1.92	35.28	3.36
5662	7730	1.570857	GGTGGTGTCCATGGGATCCA	61.571	60.000	15.23	14.40	36.68	3.41
5663	7731	0.107017	GTGGTGTCCATGGGATCCAG	60.107	60.000	15.23	2.39	38.47	3.86
5664	7732	1.281199	TGGTGTCCATGGGATCCAGG	61.281	60.000	15.23	12.26	36.75	4.45
5782	7850	9.783256	AATAATAAAACAAGCCGAGATGTAAAC	57.217	29.630	0.00	0.00	0.00	2.01
5783	7851	4.499037	AAAACAAGCCGAGATGTAAACC	57.501	40.909	0.00	0.00	0.00	3.27
5784	7852	3.418684	AACAAGCCGAGATGTAAACCT	57.581	42.857	0.00	0.00	0.00	3.50
5785	7853	2.973945	ACAAGCCGAGATGTAAACCTC	58.026	47.619	0.00	0.00	0.00	3.85
5792	7860	3.761311	GAGATGTAAACCTCGAGTCGT	57.239	47.619	13.12	0.00	0.00	4.34
5793	7861	3.427243	GAGATGTAAACCTCGAGTCGTG	58.573	50.000	13.12	10.20	0.00	4.35
5795	7863	2.693797	TGTAAACCTCGAGTCGTGTC	57.306	50.000	13.12	1.08	0.00	3.67
5983	8055	1.612726	CCAGGGGAGAAGTGCAAGAAG	60.613	57.143	0.00	0.00	0.00	2.85
6004	8076	1.156736	CCTTACAGTCAAGTTGCCCG	58.843	55.000	0.00	0.00	0.00	6.13
6023	8103	1.760192	GCCAAGATCATGAGCCAACT	58.240	50.000	7.49	0.00	0.00	3.16
6065	8145	8.917655	CAGAACTAAAGTTTAGAACACTAGCTC	58.082	37.037	25.87	9.61	38.56	4.09
6069	8149	6.526566	AAAGTTTAGAACACTAGCTCGTTG	57.473	37.500	0.00	0.00	0.00	4.10
6073	8153	1.276421	AGAACACTAGCTCGTTGGCAT	59.724	47.619	0.00	0.00	34.17	4.40
6079	8159	5.424757	ACACTAGCTCGTTGGCATTTTATA	58.575	37.500	0.00	0.00	34.17	0.98
6080	8160	5.878116	ACACTAGCTCGTTGGCATTTTATAA	59.122	36.000	0.00	0.00	34.17	0.98
6082	8162	7.067008	ACACTAGCTCGTTGGCATTTTATAAAT	59.933	33.333	0.00	0.00	34.17	1.40
6083	8163	8.556194	CACTAGCTCGTTGGCATTTTATAAATA	58.444	33.333	0.00	0.00	34.17	1.40
6085	8165	9.944663	CTAGCTCGTTGGCATTTTATAAATAAA	57.055	29.630	0.00	0.00	34.17	1.40
6087	8167	9.083080	AGCTCGTTGGCATTTTATAAATAAAAC	57.917	29.630	9.46	0.51	42.85	2.43
6119	8261	7.333423	CAGTTTGCAGAATTCATCAATTCCATT	59.667	33.333	8.44	0.00	46.50	3.16
6152	8294	5.253330	TCAGATTAAAACGCAGAAGGGAAT	58.747	37.500	0.00	0.00	0.00	3.01
6159	8301	3.643159	ACGCAGAAGGGAATTTTTGAC	57.357	42.857	0.00	0.00	0.00	3.18
6169	8311	3.565516	GGAATTTTTGACTGCGAGTTCC	58.434	45.455	0.00	0.00	0.00	3.62
6197	8339	7.432252	CGCCCTTTTGAACATGATACTTAATTC	59.568	37.037	0.00	0.00	0.00	2.17
6198	8340	8.250332	GCCCTTTTGAACATGATACTTAATTCA	58.750	33.333	0.00	0.00	0.00	2.57
6253	8395	7.757941	TGATCATTGGTTTGTTCATTACTGA	57.242	32.000	0.00	0.00	0.00	3.41
6256	8419	9.294030	GATCATTGGTTTGTTCATTACTGAATC	57.706	33.333	0.00	0.00	43.08	2.52
6265	8428	9.453572	TTTGTTCATTACTGAATCAGATAGCTT	57.546	29.630	18.20	0.00	43.08	3.74
6292	8455	6.647895	GCAAAATCAAAGTCTGAATTGTGGAT	59.352	34.615	0.00	0.00	37.67	3.41
6347	8510	7.679025	AGGTTCTTAGTAAATACTCCCTCTGTT	59.321	37.037	0.00	0.00	37.73	3.16
6353	8516	5.785940	AGTAAATACTCCCTCTGTTCCAACT	59.214	40.000	0.00	0.00	0.00	3.16
6357	8520	2.638363	ACTCCCTCTGTTCCAACTTACC	59.362	50.000	0.00	0.00	0.00	2.85
6363	8526	2.960384	TCTGTTCCAACTTACCTGTCGA	59.040	45.455	0.00	0.00	0.00	4.20
6378	8551	4.876107	ACCTGTCGAAACAATGGATGTATC	59.124	41.667	0.00	0.00	42.99	2.24
6381	8554	6.422100	CCTGTCGAAACAATGGATGTATCTAG	59.578	42.308	0.00	0.00	42.99	2.43
6415	8588	6.439599	ACGTCTAGATACATCCATTTCTTCG	58.560	40.000	0.00	0.00	0.00	3.79
6428	8601	5.350365	TCCATTTCTTCGACAAGTAATTCCG	59.650	40.000	0.00	0.00	29.59	4.30
6430	8603	3.947910	TCTTCGACAAGTAATTCCGGT	57.052	42.857	0.00	0.00	0.00	5.28
6444	8617	0.466922	TCCGGTCGGAGGGAGTATTC	60.467	60.000	8.14	0.00	39.76	1.75
6458	8631	7.548427	GGAGGGAGTATTCCGTATAAATAAAGC	59.452	40.741	0.00	0.00	40.64	3.51
6481	8654	3.319689	TGTCAACGTGATGAAGTAGGTCA	59.680	43.478	0.00	0.00	0.00	4.02
6528	8701	5.955961	TGTGGAGTTGATATCTGGATCAA	57.044	39.130	3.98	0.00	42.26	2.57
6586	8771	6.529829	GCATTTTCATGCGGTGTTAAATTAGA	59.470	34.615	0.00	0.00	46.45	2.10
6595	8780	6.320164	TGCGGTGTTAAATTAGAAATATGCCT	59.680	34.615	0.00	0.00	0.00	4.75
6638	8843	4.839121	ACAATGTATACCATGTTGACCGT	58.161	39.130	0.00	0.00	32.82	4.83
6679	8884	4.520111	TCATCATACAGCAGCAAAACAACT	59.480	37.500	0.00	0.00	0.00	3.16
6712	8917	6.790285	AAATTGGCAATGATCTGTTTTGAC	57.210	33.333	14.47	0.00	0.00	3.18
6715	8922	2.415893	GGCAATGATCTGTTTTGACGGG	60.416	50.000	0.00	0.00	0.00	5.28
6719	8926	5.527951	CAATGATCTGTTTTGACGGGAAAA	58.472	37.500	0.00	0.00	0.00	2.29
6746	8972	7.889589	ATGTAAAACCTGCTATTTTGAAAGC	57.110	32.000	4.15	0.00	39.25	3.51
6795	9021	5.466058	TGTTGCTGTTATTTTGGCTTGAATG	59.534	36.000	0.00	0.00	0.00	2.67
6797	9023	5.229423	TGCTGTTATTTTGGCTTGAATGTC	58.771	37.500	0.00	0.00	0.00	3.06
6839	10988	8.408601	ACTTATCCATAAGAATGTCATTTGTGC	58.591	33.333	12.40	0.00	41.72	4.57
6857	11021	2.026522	CGGCGTGTTTTTCCCAAGA	58.973	52.632	0.00	0.00	0.00	3.02
7040	11211	6.319658	CGGGAGTAGAGTAATAGTAACCACAA	59.680	42.308	0.00	0.00	0.00	3.33
7064	11235	2.548057	GTGGAAGACGTTGCAATCTCAA	59.452	45.455	0.59	0.00	35.52	3.02
7278	11457	2.823924	TCCCGTCGTGAAAGATCAAA	57.176	45.000	0.00	0.00	37.30	2.69
7313	11492	6.183360	GGAGAACATACGGAATTCTCTAGGTT	60.183	42.308	19.26	8.66	45.09	3.50
7661	11843	8.507249	AGTGTGCAGAAGACAATTTTAATAGTC	58.493	33.333	0.00	0.00	0.00	2.59
7730	11915	0.317479	GATCCGTCGGTTATCCCTGG	59.683	60.000	11.88	0.00	0.00	4.45
7737	11922	1.191535	CGGTTATCCCTGGTCTCACA	58.808	55.000	0.00	0.00	0.00	3.58
7738	11923	1.137086	CGGTTATCCCTGGTCTCACAG	59.863	57.143	0.00	0.00	38.21	3.66
7747	11932	3.533606	CTGGTCTCACAGGTTGATAGG	57.466	52.381	0.00	0.00	34.84	2.57
7749	11934	3.708631	CTGGTCTCACAGGTTGATAGGAT	59.291	47.826	0.00	0.00	34.84	3.24
7757	11942	7.180229	TCTCACAGGTTGATAGGATAACAAAGA	59.820	37.037	0.00	0.00	35.06	2.52
7776	11961	7.542025	ACAAAGAAAACAATATCATGGAGAGC	58.458	34.615	0.00	0.00	0.00	4.09

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
6	7	2.439156	GAAGCAGGCAAGCCGGAT	60.439	61.111	15.46	5.71	41.95	4.18
7	8	4.722700	GGAAGCAGGCAAGCCGGA	62.723	66.667	15.46	0.00	41.95	5.14
8	9	4.729918	AGGAAGCAGGCAAGCCGG	62.730	66.667	6.88	6.88	41.95	6.13
9	10	2.674380	AAGGAAGCAGGCAAGCCG	60.674	61.111	5.28	2.12	41.95	5.52
10	11	2.346541	GGAAGGAAGCAGGCAAGCC	61.347	63.158	2.02	2.02	34.23	4.35
11	12	2.346541	GGGAAGGAAGCAGGCAAGC	61.347	63.158	0.00	0.00	0.00	4.01
12	13	0.324091	ATGGGAAGGAAGCAGGCAAG	60.324	55.000	0.00	0.00	0.00	4.01
13	14	0.612732	CATGGGAAGGAAGCAGGCAA	60.613	55.000	0.00	0.00	0.00	4.52
14	15	1.000521	CATGGGAAGGAAGCAGGCA	60.001	57.895	0.00	0.00	0.00	4.75
15	16	2.421399	GCATGGGAAGGAAGCAGGC	61.421	63.158	0.00	0.00	0.00	4.85
16	17	0.750911	GAGCATGGGAAGGAAGCAGG	60.751	60.000	0.00	0.00	0.00	4.85
17	18	0.750911	GGAGCATGGGAAGGAAGCAG	60.751	60.000	0.00	0.00	0.00	4.24
18	19	1.304282	GGAGCATGGGAAGGAAGCA	59.696	57.895	0.00	0.00	0.00	3.91
19	20	1.454663	GGGAGCATGGGAAGGAAGC	60.455	63.158	0.00	0.00	0.00	3.86
20	21	0.554792	ATGGGAGCATGGGAAGGAAG	59.445	55.000	0.00	0.00	0.00	3.46
21	22	0.552848	GATGGGAGCATGGGAAGGAA	59.447	55.000	0.00	0.00	0.00	3.36
22	23	1.355718	GGATGGGAGCATGGGAAGGA	61.356	60.000	0.00	0.00	0.00	3.36
23	24	1.152368	GGATGGGAGCATGGGAAGG	59.848	63.158	0.00	0.00	0.00	3.46
24	25	1.228063	CGGATGGGAGCATGGGAAG	60.228	63.158	0.00	0.00	0.00	3.46
25	26	2.000701	ACGGATGGGAGCATGGGAA	61.001	57.895	0.00	0.00	0.00	3.97
26	27	2.366837	ACGGATGGGAGCATGGGA	60.367	61.111	0.00	0.00	0.00	4.37
27	28	2.203252	CACGGATGGGAGCATGGG	60.203	66.667	0.00	0.00	0.00	4.00
28	29	2.903855	GCACGGATGGGAGCATGG	60.904	66.667	0.00	0.00	0.00	3.66
29	30	1.890979	GAGCACGGATGGGAGCATG	60.891	63.158	0.00	0.00	0.00	4.06
30	31	2.507944	GAGCACGGATGGGAGCAT	59.492	61.111	0.00	0.00	0.00	3.79
31	32	3.785859	GGAGCACGGATGGGAGCA	61.786	66.667	0.00	0.00	0.00	4.26
32	33	4.554036	GGGAGCACGGATGGGAGC	62.554	72.222	0.00	0.00	0.00	4.70
33	34	3.083349	TGGGAGCACGGATGGGAG	61.083	66.667	0.00	0.00	0.00	4.30
34	35	3.399181	GTGGGAGCACGGATGGGA	61.399	66.667	0.00	0.00	0.00	4.37
35	36	2.876368	GAAGTGGGAGCACGGATGGG	62.876	65.000	0.00	0.00	0.00	4.00
36	37	1.450312	GAAGTGGGAGCACGGATGG	60.450	63.158	0.00	0.00	0.00	3.51
37	38	0.107508	ATGAAGTGGGAGCACGGATG	60.108	55.000	0.00	0.00	0.00	3.51
38	39	0.179000	GATGAAGTGGGAGCACGGAT	59.821	55.000	0.00	0.00	0.00	4.18
39	40	0.904865	AGATGAAGTGGGAGCACGGA	60.905	55.000	0.00	0.00	0.00	4.69
40	41	0.036010	AAGATGAAGTGGGAGCACGG	60.036	55.000	0.00	0.00	0.00	4.94
41	42	2.271800	GTAAGATGAAGTGGGAGCACG	58.728	52.381	0.00	0.00	0.00	5.34
42	43	2.271800	CGTAAGATGAAGTGGGAGCAC	58.728	52.381	0.00	0.00	43.02	4.40
43	44	1.207089	CCGTAAGATGAAGTGGGAGCA	59.793	52.381	0.00	0.00	43.02	4.26
44	45	1.941325	CCGTAAGATGAAGTGGGAGC	58.059	55.000	0.00	0.00	43.02	4.70
45	46	1.482593	AGCCGTAAGATGAAGTGGGAG	59.517	52.381	0.00	0.00	43.02	4.30
46	47	1.207089	CAGCCGTAAGATGAAGTGGGA	59.793	52.381	0.00	0.00	43.02	4.37
47	48	1.066143	ACAGCCGTAAGATGAAGTGGG	60.066	52.381	0.00	0.00	43.02	4.61
48	49	2.271800	GACAGCCGTAAGATGAAGTGG	58.728	52.381	0.00	0.00	43.02	4.00
49	50	2.093973	AGGACAGCCGTAAGATGAAGTG	60.094	50.000	0.00	0.00	39.96	3.16
50	51	2.180276	AGGACAGCCGTAAGATGAAGT	58.820	47.619	0.00	0.00	39.96	3.01
51	52	2.969628	AGGACAGCCGTAAGATGAAG	57.030	50.000	0.00	0.00	39.96	3.02
52	53	3.695830	AAAGGACAGCCGTAAGATGAA	57.304	42.857	0.00	0.00	39.96	2.57
53	54	3.260884	AGAAAAGGACAGCCGTAAGATGA	59.739	43.478	0.00	0.00	39.96	2.92
54	55	3.600388	AGAAAAGGACAGCCGTAAGATG	58.400	45.455	0.00	0.00	39.96	2.90
55	56	3.515901	AGAGAAAAGGACAGCCGTAAGAT	59.484	43.478	0.00	0.00	39.96	2.40
56	57	2.897969	AGAGAAAAGGACAGCCGTAAGA	59.102	45.455	0.00	0.00	39.96	2.10
57	58	3.320673	AGAGAAAAGGACAGCCGTAAG	57.679	47.619	0.00	0.00	39.96	2.34
58	59	3.764237	AAGAGAAAAGGACAGCCGTAA	57.236	42.857	0.00	0.00	39.96	3.18
59	60	3.764237	AAAGAGAAAAGGACAGCCGTA	57.236	42.857	0.00	0.00	39.96	4.02
60	61	2.640316	AAAGAGAAAAGGACAGCCGT	57.360	45.000	0.00	0.00	39.96	5.68
61	62	3.565902	AGAAAAAGAGAAAAGGACAGCCG	59.434	43.478	0.00	0.00	39.96	5.52
62	63	5.521906	AAGAAAAAGAGAAAAGGACAGCC	57.478	39.130	0.00	0.00	0.00	4.85
63	64	7.261325	AGAAAAGAAAAAGAGAAAAGGACAGC	58.739	34.615	0.00	0.00	0.00	4.40
80	81	9.853177	GGGGAAGATGATTAGATTAGAAAAGAA	57.147	33.333	0.00	0.00	0.00	2.52
81	82	8.440771	GGGGGAAGATGATTAGATTAGAAAAGA	58.559	37.037	0.00	0.00	0.00	2.52
82	83	8.628630	GGGGGAAGATGATTAGATTAGAAAAG	57.371	38.462	0.00	0.00	0.00	2.27
117	118	1.957113	GCCCCACTCCCTGAAAATCAG	60.957	57.143	0.32	0.32	43.91	2.90
118	119	0.039618	GCCCCACTCCCTGAAAATCA	59.960	55.000	0.00	0.00	0.00	2.57
119	120	0.684479	GGCCCCACTCCCTGAAAATC	60.684	60.000	0.00	0.00	0.00	2.17
120	121	1.388133	GGCCCCACTCCCTGAAAAT	59.612	57.895	0.00	0.00	0.00	1.82
121	122	2.851045	GGCCCCACTCCCTGAAAA	59.149	61.111	0.00	0.00	0.00	2.29
122	123	3.646715	CGGCCCCACTCCCTGAAA	61.647	66.667	0.00	0.00	0.00	2.69
136	137	1.315690	GGTAGAAAATAAGGCCCGGC	58.684	55.000	0.00	0.00	0.00	6.13
137	138	2.721425	TGGTAGAAAATAAGGCCCGG	57.279	50.000	0.00	0.00	0.00	5.73
138	139	4.204012	TGATTGGTAGAAAATAAGGCCCG	58.796	43.478	0.00	0.00	0.00	6.13
139	140	6.538945	TTTGATTGGTAGAAAATAAGGCCC	57.461	37.500	0.00	0.00	0.00	5.80
140	141	7.781056	TGATTTGATTGGTAGAAAATAAGGCC	58.219	34.615	0.00	0.00	0.00	5.19
141	142	9.305925	CTTGATTTGATTGGTAGAAAATAAGGC	57.694	33.333	0.00	0.00	0.00	4.35
142	143	9.305925	GCTTGATTTGATTGGTAGAAAATAAGG	57.694	33.333	0.00	0.00	0.00	2.69
143	144	9.305925	GGCTTGATTTGATTGGTAGAAAATAAG	57.694	33.333	0.00	0.00	0.00	1.73
144	145	8.811017	TGGCTTGATTTGATTGGTAGAAAATAA	58.189	29.630	0.00	0.00	0.00	1.40
145	146	8.359875	TGGCTTGATTTGATTGGTAGAAAATA	57.640	30.769	0.00	0.00	0.00	1.40
146	147	7.243604	TGGCTTGATTTGATTGGTAGAAAAT	57.756	32.000	0.00	0.00	0.00	1.82
147	148	6.662865	TGGCTTGATTTGATTGGTAGAAAA	57.337	33.333	0.00	0.00	0.00	2.29
148	149	6.211184	ACATGGCTTGATTTGATTGGTAGAAA	59.789	34.615	7.45	0.00	0.00	2.52
149	150	5.716228	ACATGGCTTGATTTGATTGGTAGAA	59.284	36.000	7.45	0.00	0.00	2.10
150	151	5.263599	ACATGGCTTGATTTGATTGGTAGA	58.736	37.500	7.45	0.00	0.00	2.59
151	152	5.587388	ACATGGCTTGATTTGATTGGTAG	57.413	39.130	7.45	0.00	0.00	3.18
152	153	5.948758	TGTACATGGCTTGATTTGATTGGTA	59.051	36.000	7.45	0.00	0.00	3.25
153	154	4.771577	TGTACATGGCTTGATTTGATTGGT	59.228	37.500	7.45	0.00	0.00	3.67
154	155	5.104374	GTGTACATGGCTTGATTTGATTGG	58.896	41.667	7.45	0.00	0.00	3.16
155	156	4.794762	CGTGTACATGGCTTGATTTGATTG	59.205	41.667	7.22	0.00	0.00	2.67
156	157	4.142403	CCGTGTACATGGCTTGATTTGATT	60.142	41.667	20.98	0.00	0.00	2.57
157	158	3.378112	CCGTGTACATGGCTTGATTTGAT	59.622	43.478	20.98	0.00	0.00	2.57
158	159	2.746904	CCGTGTACATGGCTTGATTTGA	59.253	45.455	20.98	0.00	0.00	2.69
159	160	2.159393	CCCGTGTACATGGCTTGATTTG	60.159	50.000	26.22	8.27	36.15	2.32
160	161	2.091541	CCCGTGTACATGGCTTGATTT	58.908	47.619	26.22	0.00	36.15	2.17
161	162	1.280710	TCCCGTGTACATGGCTTGATT	59.719	47.619	26.22	0.00	36.15	2.57
162	163	0.908910	TCCCGTGTACATGGCTTGAT	59.091	50.000	26.22	0.00	36.15	2.57
163	164	0.249120	CTCCCGTGTACATGGCTTGA	59.751	55.000	26.22	17.44	36.15	3.02
164	165	1.369091	GCTCCCGTGTACATGGCTTG	61.369	60.000	26.22	18.20	36.15	4.01
165	166	1.078426	GCTCCCGTGTACATGGCTT	60.078	57.895	26.22	0.00	36.15	4.35
166	167	2.290287	TGCTCCCGTGTACATGGCT	61.290	57.895	26.22	0.00	36.15	4.75
167	168	2.106683	GTGCTCCCGTGTACATGGC	61.107	63.158	26.22	16.37	36.15	4.40
168	169	1.809619	CGTGCTCCCGTGTACATGG	60.810	63.158	24.94	24.94	37.23	3.66
169	170	1.809619	CCGTGCTCCCGTGTACATG	60.810	63.158	8.18	8.18	0.00	3.21
170	171	1.327690	ATCCGTGCTCCCGTGTACAT	61.328	55.000	0.00	0.00	0.00	2.29
171	172	1.980232	ATCCGTGCTCCCGTGTACA	60.980	57.895	0.00	0.00	0.00	2.90
172	173	1.518572	CATCCGTGCTCCCGTGTAC	60.519	63.158	0.00	0.00	0.00	2.90
173	174	2.717044	CCATCCGTGCTCCCGTGTA	61.717	63.158	0.00	0.00	0.00	2.90
174	175	4.082523	CCATCCGTGCTCCCGTGT	62.083	66.667	0.00	0.00	0.00	4.49
175	176	4.838152	CCCATCCGTGCTCCCGTG	62.838	72.222	0.00	0.00	0.00	4.94
177	178	4.227134	CTCCCATCCGTGCTCCCG	62.227	72.222	0.00	0.00	0.00	5.14
178	179	4.554036	GCTCCCATCCGTGCTCCC	62.554	72.222	0.00	0.00	0.00	4.30
179	180	3.785859	TGCTCCCATCCGTGCTCC	61.786	66.667	0.00	0.00	0.00	4.70
180	181	2.512515	GTGCTCCCATCCGTGCTC	60.513	66.667	0.00	0.00	0.00	4.26
181	182	4.457496	CGTGCTCCCATCCGTGCT	62.457	66.667	0.00	0.00	0.00	4.40
183	184	4.838152	CCCGTGCTCCCATCCGTG	62.838	72.222	0.00	0.00	0.00	4.94
186	187	3.866582	CTCCCCGTGCTCCCATCC	61.867	72.222	0.00	0.00	0.00	3.51
187	188	3.866582	CCTCCCCGTGCTCCCATC	61.867	72.222	0.00	0.00	0.00	3.51
198	199	4.120755	CTTGCCTGCTCCCTCCCC	62.121	72.222	0.00	0.00	0.00	4.81
199	200	3.334054	ACTTGCCTGCTCCCTCCC	61.334	66.667	0.00	0.00	0.00	4.30
200	201	2.250741	GAGACTTGCCTGCTCCCTCC	62.251	65.000	0.00	0.00	0.00	4.30
201	202	1.220477	GAGACTTGCCTGCTCCCTC	59.780	63.158	0.00	0.00	0.00	4.30
202	203	2.654079	CGAGACTTGCCTGCTCCCT	61.654	63.158	0.00	0.00	0.00	4.20
203	204	2.125350	CGAGACTTGCCTGCTCCC	60.125	66.667	0.00	0.00	0.00	4.30
204	205	1.446966	GACGAGACTTGCCTGCTCC	60.447	63.158	0.00	0.00	0.00	4.70
205	206	1.446966	GGACGAGACTTGCCTGCTC	60.447	63.158	0.00	0.00	0.00	4.26
206	207	2.659610	GGACGAGACTTGCCTGCT	59.340	61.111	0.00	0.00	0.00	4.24
207	208	2.435059	GGGACGAGACTTGCCTGC	60.435	66.667	0.00	0.00	0.00	4.85
208	209	1.216710	GAGGGACGAGACTTGCCTG	59.783	63.158	0.00	0.00	34.37	4.85
209	210	0.968393	GAGAGGGACGAGACTTGCCT	60.968	60.000	0.00	0.00	37.55	4.75
210	211	1.513622	GAGAGGGACGAGACTTGCC	59.486	63.158	0.00	0.00	0.00	4.52
211	212	0.968393	AGGAGAGGGACGAGACTTGC	60.968	60.000	0.00	0.00	0.00	4.01
212	213	1.203523	CAAGGAGAGGGACGAGACTTG	59.796	57.143	0.00	0.00	0.00	3.16
213	214	1.551452	CAAGGAGAGGGACGAGACTT	58.449	55.000	0.00	0.00	0.00	3.01
214	215	0.323908	CCAAGGAGAGGGACGAGACT	60.324	60.000	0.00	0.00	0.00	3.24
215	216	0.323542	TCCAAGGAGAGGGACGAGAC	60.324	60.000	0.00	0.00	0.00	3.36
216	217	0.033991	CTCCAAGGAGAGGGACGAGA	60.034	60.000	10.66	0.00	44.53	4.04
217	218	0.323908	ACTCCAAGGAGAGGGACGAG	60.324	60.000	22.34	0.00	44.53	4.18
218	219	0.612174	CACTCCAAGGAGAGGGACGA	60.612	60.000	22.34	0.00	44.53	4.20
219	220	0.900647	ACACTCCAAGGAGAGGGACG	60.901	60.000	22.34	6.11	44.53	4.79
220	221	1.826096	GTACACTCCAAGGAGAGGGAC	59.174	57.143	22.34	15.57	44.53	4.46
221	222	1.717077	AGTACACTCCAAGGAGAGGGA	59.283	52.381	22.34	8.09	44.53	4.20
222	223	1.827969	CAGTACACTCCAAGGAGAGGG	59.172	57.143	22.34	12.94	44.53	4.30
223	224	1.205893	GCAGTACACTCCAAGGAGAGG	59.794	57.143	22.34	15.18	44.53	3.69
228	229	0.670546	CACGGCAGTACACTCCAAGG	60.671	60.000	0.00	0.00	0.00	3.61
238	239	3.089284	TCTTGAGAGATTCACGGCAGTA	58.911	45.455	0.00	0.00	34.94	2.74
274	275	5.659079	ACTATATTTCCCCAAAATTTGCGGA	59.341	36.000	7.94	7.94	38.53	5.54
280	281	8.650490	CCATTAGCACTATATTTCCCCAAAATT	58.350	33.333	0.00	0.00	38.53	1.82
283	284	6.549364	CACCATTAGCACTATATTTCCCCAAA	59.451	38.462	0.00	0.00	0.00	3.28
297	298	2.279741	TGATTCGAGCACCATTAGCAC	58.720	47.619	0.00	0.00	0.00	4.40
299	300	2.289002	CCTTGATTCGAGCACCATTAGC	59.711	50.000	0.00	0.00	0.00	3.09
301	302	3.904800	TCCTTGATTCGAGCACCATTA	57.095	42.857	0.00	0.00	0.00	1.90
302	303	2.787473	TCCTTGATTCGAGCACCATT	57.213	45.000	0.00	0.00	0.00	3.16
303	304	3.287867	AATCCTTGATTCGAGCACCAT	57.712	42.857	0.00	0.00	0.00	3.55
318	322	1.282157	GTTCCACCCTGCTGTAATCCT	59.718	52.381	0.00	0.00	0.00	3.24
327	331	2.789409	AATCTACAGTTCCACCCTGC	57.211	50.000	0.00	0.00	33.09	4.85
332	336	7.047891	TCCATGTCATAAATCTACAGTTCCAC	58.952	38.462	0.00	0.00	0.00	4.02
334	338	8.682936	AATCCATGTCATAAATCTACAGTTCC	57.317	34.615	0.00	0.00	0.00	3.62
338	342	8.627403	AGCAAAATCCATGTCATAAATCTACAG	58.373	33.333	0.00	0.00	0.00	2.74
348	352	5.361571	TGATGCTTAGCAAAATCCATGTCAT	59.638	36.000	12.08	0.00	43.62	3.06
350	354	5.252969	TGATGCTTAGCAAAATCCATGTC	57.747	39.130	12.08	1.08	43.62	3.06
351	355	5.864418	ATGATGCTTAGCAAAATCCATGT	57.136	34.783	12.08	0.00	43.62	3.21
435	439	0.030101	CTCGCTCACTAGCCAGTAGC	59.970	60.000	0.00	4.51	46.68	3.58
436	440	1.332375	GTCTCGCTCACTAGCCAGTAG	59.668	57.143	0.00	0.00	46.68	2.57
437	441	1.065345	AGTCTCGCTCACTAGCCAGTA	60.065	52.381	0.00	0.00	46.68	2.74
438	442	0.322997	AGTCTCGCTCACTAGCCAGT	60.323	55.000	0.00	0.00	46.68	4.00
439	443	1.669604	TAGTCTCGCTCACTAGCCAG	58.330	55.000	0.00	0.00	46.68	4.85
440	444	2.017782	CTTAGTCTCGCTCACTAGCCA	58.982	52.381	0.00	0.00	46.68	4.75
441	445	1.268845	GCTTAGTCTCGCTCACTAGCC	60.269	57.143	0.00	0.00	46.68	3.93
467	471	6.372103	CGTAGTATGCTACTAGCCACTAAGAT	59.628	42.308	17.42	4.48	44.02	2.40
469	473	5.469421	ACGTAGTATGCTACTAGCCACTAAG	59.531	44.000	17.42	19.86	44.02	2.18
514	518	4.096003	GCCGCCCTGCCAAGTCTA	62.096	66.667	0.00	0.00	0.00	2.59
531	535	4.502171	TTGTGCATGGCATATAATTCGG	57.498	40.909	0.00	0.00	41.91	4.30
532	536	5.747675	TGTTTTGTGCATGGCATATAATTCG	59.252	36.000	0.00	0.00	41.91	3.34
533	537	7.278424	ACTTGTTTTGTGCATGGCATATAATTC	59.722	33.333	0.00	0.00	41.91	2.17
534	538	7.064847	CACTTGTTTTGTGCATGGCATATAATT	59.935	33.333	0.00	0.00	41.91	1.40
536	540	5.868258	CACTTGTTTTGTGCATGGCATATAA	59.132	36.000	0.00	0.00	41.91	0.98
538	542	4.021280	TCACTTGTTTTGTGCATGGCATAT	60.021	37.500	0.00	0.00	41.91	1.78
539	543	3.320256	TCACTTGTTTTGTGCATGGCATA	59.680	39.130	0.00	0.00	41.91	3.14
540	544	2.102757	TCACTTGTTTTGTGCATGGCAT	59.897	40.909	0.00	0.00	41.91	4.40
542	546	2.222007	TCACTTGTTTTGTGCATGGC	57.778	45.000	0.00	0.00	35.58	4.40
543	547	3.784338	AGTTCACTTGTTTTGTGCATGG	58.216	40.909	0.00	0.00	35.58	3.66
544	548	5.339177	TGTAGTTCACTTGTTTTGTGCATG	58.661	37.500	0.00	0.00	35.58	4.06
545	549	5.356751	TCTGTAGTTCACTTGTTTTGTGCAT	59.643	36.000	0.00	0.00	35.58	3.96
546	550	4.697828	TCTGTAGTTCACTTGTTTTGTGCA	59.302	37.500	0.00	0.00	35.58	4.57
547	551	5.229921	TCTGTAGTTCACTTGTTTTGTGC	57.770	39.130	0.00	0.00	35.58	4.57
548	552	9.950680	AATAATCTGTAGTTCACTTGTTTTGTG	57.049	29.630	0.00	0.00	36.82	3.33
576	580	8.590204	ACAACGTTATTGGAAGGGAAATAAAAT	58.410	29.630	0.00	0.00	31.79	1.82
581	585	6.150474	CAGTACAACGTTATTGGAAGGGAAAT	59.850	38.462	0.00	0.00	0.00	2.17
585	589	3.687698	CCAGTACAACGTTATTGGAAGGG	59.312	47.826	0.00	0.00	0.00	3.95
614	618	1.640593	TTTGCAGGGTGGAGTGTGGA	61.641	55.000	0.00	0.00	0.00	4.02
615	619	1.152777	TTTGCAGGGTGGAGTGTGG	60.153	57.895	0.00	0.00	0.00	4.17
616	620	0.466189	AGTTTGCAGGGTGGAGTGTG	60.466	55.000	0.00	0.00	0.00	3.82
617	621	0.179018	GAGTTTGCAGGGTGGAGTGT	60.179	55.000	0.00	0.00	0.00	3.55
618	622	0.109342	AGAGTTTGCAGGGTGGAGTG	59.891	55.000	0.00	0.00	0.00	3.51
619	623	1.348036	GTAGAGTTTGCAGGGTGGAGT	59.652	52.381	0.00	0.00	0.00	3.85
620	624	1.673033	CGTAGAGTTTGCAGGGTGGAG	60.673	57.143	0.00	0.00	0.00	3.86
621	625	0.320374	CGTAGAGTTTGCAGGGTGGA	59.680	55.000	0.00	0.00	0.00	4.02
622	626	1.298859	GCGTAGAGTTTGCAGGGTGG	61.299	60.000	0.00	0.00	0.00	4.61
623	627	0.320771	AGCGTAGAGTTTGCAGGGTG	60.321	55.000	0.00	0.00	0.00	4.61
624	628	0.037232	GAGCGTAGAGTTTGCAGGGT	60.037	55.000	0.00	0.00	0.00	4.34
625	629	0.741221	GGAGCGTAGAGTTTGCAGGG	60.741	60.000	0.00	0.00	0.00	4.45
626	630	0.741221	GGGAGCGTAGAGTTTGCAGG	60.741	60.000	0.00	0.00	0.00	4.85
627	631	0.741221	GGGGAGCGTAGAGTTTGCAG	60.741	60.000	0.00	0.00	0.00	4.41
628	632	1.295423	GGGGAGCGTAGAGTTTGCA	59.705	57.895	0.00	0.00	0.00	4.08
629	633	1.019805	GTGGGGAGCGTAGAGTTTGC	61.020	60.000	0.00	0.00	0.00	3.68
630	634	0.608640	AGTGGGGAGCGTAGAGTTTG	59.391	55.000	0.00	0.00	0.00	2.93
631	635	0.896226	GAGTGGGGAGCGTAGAGTTT	59.104	55.000	0.00	0.00	0.00	2.66
632	636	0.971447	GGAGTGGGGAGCGTAGAGTT	60.971	60.000	0.00	0.00	0.00	3.01
633	637	1.380112	GGAGTGGGGAGCGTAGAGT	60.380	63.158	0.00	0.00	0.00	3.24
634	638	1.379977	TGGAGTGGGGAGCGTAGAG	60.380	63.158	0.00	0.00	0.00	2.43
635	639	1.681327	GTGGAGTGGGGAGCGTAGA	60.681	63.158	0.00	0.00	0.00	2.59
636	640	1.982395	TGTGGAGTGGGGAGCGTAG	60.982	63.158	0.00	0.00	0.00	3.51
637	641	2.118732	TGTGGAGTGGGGAGCGTA	59.881	61.111	0.00	0.00	0.00	4.42
638	642	3.626924	GTGTGGAGTGGGGAGCGT	61.627	66.667	0.00	0.00	0.00	5.07
639	643	4.394712	GGTGTGGAGTGGGGAGCG	62.395	72.222	0.00	0.00	0.00	5.03
640	644	4.035102	GGGTGTGGAGTGGGGAGC	62.035	72.222	0.00	0.00	0.00	4.70
641	645	3.706373	CGGGTGTGGAGTGGGGAG	61.706	72.222	0.00	0.00	0.00	4.30
645	649	2.191786	TATTGCCGGGTGTGGAGTGG	62.192	60.000	2.18	0.00	0.00	4.00
646	650	0.107214	ATATTGCCGGGTGTGGAGTG	60.107	55.000	2.18	0.00	0.00	3.51
647	651	0.107214	CATATTGCCGGGTGTGGAGT	60.107	55.000	2.18	0.00	0.00	3.85
648	652	0.180171	TCATATTGCCGGGTGTGGAG	59.820	55.000	2.18	0.00	0.00	3.86
649	653	0.843309	ATCATATTGCCGGGTGTGGA	59.157	50.000	2.18	0.00	0.00	4.02
650	654	0.953727	CATCATATTGCCGGGTGTGG	59.046	55.000	2.18	0.00	0.00	4.17
651	655	1.875514	CTCATCATATTGCCGGGTGTG	59.124	52.381	2.18	0.00	0.00	3.82
652	656	1.490490	ACTCATCATATTGCCGGGTGT	59.510	47.619	2.18	0.00	0.00	4.16
653	657	1.875514	CACTCATCATATTGCCGGGTG	59.124	52.381	2.18	0.00	0.00	4.61
654	658	1.202806	CCACTCATCATATTGCCGGGT	60.203	52.381	2.18	0.00	0.00	5.28
655	659	1.527034	CCACTCATCATATTGCCGGG	58.473	55.000	2.18	0.00	0.00	5.73
656	660	1.527034	CCCACTCATCATATTGCCGG	58.473	55.000	0.00	0.00	0.00	6.13
657	661	1.072173	TCCCCACTCATCATATTGCCG	59.928	52.381	0.00	0.00	0.00	5.69
658	662	2.107204	ACTCCCCACTCATCATATTGCC	59.893	50.000	0.00	0.00	0.00	4.52
659	663	3.498774	ACTCCCCACTCATCATATTGC	57.501	47.619	0.00	0.00	0.00	3.56
660	664	5.815233	AGTACTCCCCACTCATCATATTG	57.185	43.478	0.00	0.00	0.00	1.90
661	665	6.158695	ACAAAGTACTCCCCACTCATCATATT	59.841	38.462	0.00	0.00	0.00	1.28
662	666	5.667626	ACAAAGTACTCCCCACTCATCATAT	59.332	40.000	0.00	0.00	0.00	1.78
663	667	5.030147	ACAAAGTACTCCCCACTCATCATA	58.970	41.667	0.00	0.00	0.00	2.15
664	668	3.846588	ACAAAGTACTCCCCACTCATCAT	59.153	43.478	0.00	0.00	0.00	2.45
665	669	3.248024	ACAAAGTACTCCCCACTCATCA	58.752	45.455	0.00	0.00	0.00	3.07
666	670	3.983044	ACAAAGTACTCCCCACTCATC	57.017	47.619	0.00	0.00	0.00	2.92
667	671	5.091552	TCTTACAAAGTACTCCCCACTCAT	58.908	41.667	0.00	0.00	0.00	2.90
668	672	4.485875	TCTTACAAAGTACTCCCCACTCA	58.514	43.478	0.00	0.00	0.00	3.41
669	673	4.621038	GCTCTTACAAAGTACTCCCCACTC	60.621	50.000	0.00	0.00	0.00	3.51
670	674	3.261137	GCTCTTACAAAGTACTCCCCACT	59.739	47.826	0.00	0.00	0.00	4.00
671	675	3.597255	GCTCTTACAAAGTACTCCCCAC	58.403	50.000	0.00	0.00	0.00	4.61
672	676	2.570302	GGCTCTTACAAAGTACTCCCCA	59.430	50.000	0.00	0.00	0.00	4.96
673	677	2.570302	TGGCTCTTACAAAGTACTCCCC	59.430	50.000	0.00	0.00	0.00	4.81
674	678	3.514309	TCTGGCTCTTACAAAGTACTCCC	59.486	47.826	0.00	0.00	0.00	4.30
675	679	4.021368	TGTCTGGCTCTTACAAAGTACTCC	60.021	45.833	0.00	0.00	0.00	3.85
676	680	4.924462	GTGTCTGGCTCTTACAAAGTACTC	59.076	45.833	0.00	0.00	0.00	2.59
677	681	4.589374	AGTGTCTGGCTCTTACAAAGTACT	59.411	41.667	0.00	0.00	0.00	2.73
678	682	4.884247	AGTGTCTGGCTCTTACAAAGTAC	58.116	43.478	0.00	0.00	0.00	2.73
679	683	6.659745	TTAGTGTCTGGCTCTTACAAAGTA	57.340	37.500	0.00	0.00	0.00	2.24
680	684	5.542779	CTTAGTGTCTGGCTCTTACAAAGT	58.457	41.667	0.00	0.00	0.00	2.66
681	685	4.390297	GCTTAGTGTCTGGCTCTTACAAAG	59.610	45.833	0.00	0.00	0.00	2.77
699	703	4.492570	CGTTTAAGCCAAGACGATGCTTAG	60.493	45.833	0.00	0.00	45.33	2.18
722	726	1.040646	TGTCTGTGGAGTGTGGAGTC	58.959	55.000	0.00	0.00	0.00	3.36
724	728	3.092301	TCTATGTCTGTGGAGTGTGGAG	58.908	50.000	0.00	0.00	0.00	3.86
804	808	8.593492	TCGAGATCCACATTCATTAGTTTATG	57.407	34.615	0.00	0.00	0.00	1.90
807	811	6.051717	CCTCGAGATCCACATTCATTAGTTT	58.948	40.000	15.71	0.00	0.00	2.66
866	873	9.091784	GATGGTGCAATCTACTGTATATGTATG	57.908	37.037	0.00	0.00	0.00	2.39
868	875	8.189119	TGATGGTGCAATCTACTGTATATGTA	57.811	34.615	0.00	0.00	0.00	2.29
870	877	7.658982	ACTTGATGGTGCAATCTACTGTATATG	59.341	37.037	0.00	0.00	0.00	1.78
873	880	5.994250	ACTTGATGGTGCAATCTACTGTAT	58.006	37.500	0.00	0.00	0.00	2.29
874	881	5.420725	ACTTGATGGTGCAATCTACTGTA	57.579	39.130	0.00	0.00	0.00	2.74
875	882	4.292186	ACTTGATGGTGCAATCTACTGT	57.708	40.909	0.00	0.00	0.00	3.55
876	883	5.295292	CCTAACTTGATGGTGCAATCTACTG	59.705	44.000	0.00	0.00	0.00	2.74
884	891	1.825090	CTGCCTAACTTGATGGTGCA	58.175	50.000	0.00	0.00	0.00	4.57
927	934	3.995669	GTGTGCGCGCGTGAGAAA	61.996	61.111	32.35	3.19	0.00	2.52
985	1012	5.592054	CATTGCCATCTCGAACTTAGTCTA	58.408	41.667	0.00	0.00	0.00	2.59
1068	1095	4.125703	GCTTCTTGTACTCATCTCCCATG	58.874	47.826	0.00	0.00	0.00	3.66
1122	1149	2.433318	GCGCTGAGCTCGTCCTTT	60.433	61.111	9.64	0.00	44.04	3.11
1164	1191	3.030291	CTCCAGCTTCTCCATGTACTCT	58.970	50.000	0.00	0.00	0.00	3.24
1169	1196	1.203441	TGGCTCCAGCTTCTCCATGT	61.203	55.000	0.00	0.00	41.70	3.21
1182	1209	2.420687	CCAGTTCTTGGTATCTGGCTCC	60.421	54.545	0.00	0.00	42.41	4.70
1227	1254	4.751600	TCGATGCAATTCTCCATGTCATAC	59.248	41.667	0.00	0.00	0.00	2.39
1230	1257	3.264998	TCGATGCAATTCTCCATGTCA	57.735	42.857	0.00	0.00	0.00	3.58
1388	1415	2.677003	CGCCGTTCATTCGCCTGTT	61.677	57.895	0.00	0.00	0.00	3.16
1390	1417	1.705337	AATCGCCGTTCATTCGCCTG	61.705	55.000	0.00	0.00	0.00	4.85
1426	1453	0.786435	AAAGGAAGGGGAAGTGCCAT	59.214	50.000	0.00	0.00	38.95	4.40
1440	1467	2.655407	AGGGTCAGAGTAGGAGAAAGGA	59.345	50.000	0.00	0.00	0.00	3.36
1441	1468	3.108847	AGGGTCAGAGTAGGAGAAAGG	57.891	52.381	0.00	0.00	0.00	3.11
1442	1469	4.349365	AGAAGGGTCAGAGTAGGAGAAAG	58.651	47.826	0.00	0.00	0.00	2.62
1443	1470	4.044825	AGAGAAGGGTCAGAGTAGGAGAAA	59.955	45.833	0.00	0.00	0.00	2.52
1444	1471	3.594232	AGAGAAGGGTCAGAGTAGGAGAA	59.406	47.826	0.00	0.00	0.00	2.87
1445	1472	3.194620	AGAGAAGGGTCAGAGTAGGAGA	58.805	50.000	0.00	0.00	0.00	3.71
1451	1571	1.006639	GGGAGAGAGAAGGGTCAGAGT	59.993	57.143	0.00	0.00	0.00	3.24
1452	1572	1.006519	TGGGAGAGAGAAGGGTCAGAG	59.993	57.143	0.00	0.00	0.00	3.35
1516	1643	2.349297	AACTAACGAAGAGGAGCACG	57.651	50.000	0.00	0.00	0.00	5.34
1517	1644	3.364068	GCAAAACTAACGAAGAGGAGCAC	60.364	47.826	0.00	0.00	0.00	4.40
1537	1756	0.751277	CACCAGGGACACAACAAGCA	60.751	55.000	0.00	0.00	0.00	3.91
1539	1758	1.455383	GCCACCAGGGACACAACAAG	61.455	60.000	0.00	0.00	40.01	3.16
1540	1759	1.454847	GCCACCAGGGACACAACAA	60.455	57.895	0.00	0.00	40.01	2.83
1541	1760	1.932156	AAGCCACCAGGGACACAACA	61.932	55.000	0.00	0.00	40.01	3.33
1542	1761	0.755327	AAAGCCACCAGGGACACAAC	60.755	55.000	0.00	0.00	40.01	3.32
1543	1762	0.847373	TAAAGCCACCAGGGACACAA	59.153	50.000	0.00	0.00	40.01	3.33
1544	1763	0.109723	GTAAAGCCACCAGGGACACA	59.890	55.000	0.00	0.00	40.01	3.72
1547	1766	1.376812	CGGTAAAGCCACCAGGGAC	60.377	63.158	0.00	0.00	38.61	4.46
1548	1767	1.128809	TTCGGTAAAGCCACCAGGGA	61.129	55.000	0.00	0.00	38.61	4.20
1549	1768	0.250989	TTTCGGTAAAGCCACCAGGG	60.251	55.000	0.00	0.00	38.61	4.45
1550	1769	1.611519	TTTTCGGTAAAGCCACCAGG	58.388	50.000	1.18	0.00	38.61	4.45
1551	1770	2.030274	CCTTTTTCGGTAAAGCCACCAG	60.030	50.000	5.09	0.00	38.61	4.00
1553	1772	1.271379	CCCTTTTTCGGTAAAGCCACC	59.729	52.381	5.09	0.00	36.97	4.61
1554	1773	1.958579	ACCCTTTTTCGGTAAAGCCAC	59.041	47.619	5.09	0.00	36.97	5.01
1555	1774	2.368311	ACCCTTTTTCGGTAAAGCCA	57.632	45.000	5.09	0.00	36.97	4.75
1556	1775	3.553508	GGAAACCCTTTTTCGGTAAAGCC	60.554	47.826	5.09	0.00	34.51	4.35
1557	1776	3.645884	GGAAACCCTTTTTCGGTAAAGC	58.354	45.455	5.09	0.00	34.51	3.51
1702	2124	4.580580	AGGCTTCTTCGTTTTTGTTGATCT	59.419	37.500	0.00	0.00	0.00	2.75
1830	2255	1.835531	GTATCGGGGGAAACTCTTGGA	59.164	52.381	0.00	0.00	0.00	3.53
1836	2261	0.533951	GTCGTGTATCGGGGGAAACT	59.466	55.000	0.00	0.00	40.32	2.66
1838	2263	0.964860	TCGTCGTGTATCGGGGGAAA	60.965	55.000	0.00	0.00	40.32	3.13
1948	2374	1.689412	GGTTGGGATCGGGGAAACT	59.311	57.895	0.00	0.00	0.00	2.66
1984	2411	0.482446	TTGGTTTGGTGGCTGGATCT	59.518	50.000	0.00	0.00	0.00	2.75
2095	2522	2.611800	TGCTGATGCCCTGGTCCT	60.612	61.111	0.00	0.00	38.71	3.85
2100	2527	2.821366	GACGGTGCTGATGCCCTG	60.821	66.667	0.00	0.00	38.71	4.45
2147	2574	2.549198	CGGATGGCTACCGTCGCTA	61.549	63.158	13.02	0.00	44.57	4.26
2168	2595	1.745115	GTGTGCTCCCGCTATTGCA	60.745	57.895	0.00	0.00	39.64	4.08
2359	2787	3.633116	GGGGCGGTGTGGTAGTGT	61.633	66.667	0.00	0.00	0.00	3.55
2360	2788	4.752879	CGGGGCGGTGTGGTAGTG	62.753	72.222	0.00	0.00	0.00	2.74
2872	3300	4.862823	CTCCTCCCCCGTCTCCCC	62.863	77.778	0.00	0.00	0.00	4.81
2873	3301	4.862823	CCTCCTCCCCCGTCTCCC	62.863	77.778	0.00	0.00	0.00	4.30
2874	3302	4.862823	CCCTCCTCCCCCGTCTCC	62.863	77.778	0.00	0.00	0.00	3.71
2875	3303	4.862823	CCCCTCCTCCCCCGTCTC	62.863	77.778	0.00	0.00	0.00	3.36
2887	3315	3.918328	TTCTCCCGTGGGTCCCCTC	62.918	68.421	5.13	0.00	36.94	4.30
2888	3316	3.925914	CTTCTCCCGTGGGTCCCCT	62.926	68.421	5.13	0.00	36.94	4.79
2889	3317	3.400054	CTTCTCCCGTGGGTCCCC	61.400	72.222	5.13	0.00	36.47	4.81
2890	3318	2.284405	TCTTCTCCCGTGGGTCCC	60.284	66.667	0.00	0.00	36.47	4.46
2891	3319	3.020237	GCTCTTCTCCCGTGGGTCC	62.020	68.421	4.53	0.00	36.47	4.46
2892	3320	1.950973	GAGCTCTTCTCCCGTGGGTC	61.951	65.000	6.43	0.00	35.77	4.46
2893	3321	1.985116	GAGCTCTTCTCCCGTGGGT	60.985	63.158	6.43	0.00	35.77	4.51
2894	3322	2.896443	GAGCTCTTCTCCCGTGGG	59.104	66.667	6.43	0.00	35.77	4.61
2895	3323	1.999071	CTCGAGCTCTTCTCCCGTGG	61.999	65.000	12.85	0.00	38.62	4.94
2896	3324	1.431440	CTCGAGCTCTTCTCCCGTG	59.569	63.158	12.85	0.00	38.62	4.94
2897	3325	2.411504	GCTCGAGCTCTTCTCCCGT	61.412	63.158	29.88	0.00	38.62	5.28
2898	3326	2.411290	GCTCGAGCTCTTCTCCCG	59.589	66.667	29.88	0.00	38.62	5.14
2946	3374	2.356793	CATCCAGATCCGCCTCGC	60.357	66.667	0.00	0.00	0.00	5.03
2947	3375	2.152297	CTCCATCCAGATCCGCCTCG	62.152	65.000	0.00	0.00	0.00	4.63
2948	3376	1.670590	CTCCATCCAGATCCGCCTC	59.329	63.158	0.00	0.00	0.00	4.70
2949	3377	1.840650	CCTCCATCCAGATCCGCCT	60.841	63.158	0.00	0.00	0.00	5.52
2950	3378	1.410850	TTCCTCCATCCAGATCCGCC	61.411	60.000	0.00	0.00	0.00	6.13
2951	3379	0.034616	CTTCCTCCATCCAGATCCGC	59.965	60.000	0.00	0.00	0.00	5.54
2952	3380	0.683973	CCTTCCTCCATCCAGATCCG	59.316	60.000	0.00	0.00	0.00	4.18
2953	3381	1.063183	CCCTTCCTCCATCCAGATCC	58.937	60.000	0.00	0.00	0.00	3.36
2954	3382	1.063183	CCCCTTCCTCCATCCAGATC	58.937	60.000	0.00	0.00	0.00	2.75
2955	3383	0.649992	TCCCCTTCCTCCATCCAGAT	59.350	55.000	0.00	0.00	0.00	2.90
2956	3384	0.030705	CTCCCCTTCCTCCATCCAGA	60.031	60.000	0.00	0.00	0.00	3.86
2957	3385	1.059006	CCTCCCCTTCCTCCATCCAG	61.059	65.000	0.00	0.00	0.00	3.86
2958	3386	1.004758	CCTCCCCTTCCTCCATCCA	59.995	63.158	0.00	0.00	0.00	3.41
2959	3387	1.772156	CCCTCCCCTTCCTCCATCC	60.772	68.421	0.00	0.00	0.00	3.51
2960	3388	2.456443	GCCCTCCCCTTCCTCCATC	61.456	68.421	0.00	0.00	0.00	3.51
2961	3389	2.368878	GCCCTCCCCTTCCTCCAT	60.369	66.667	0.00	0.00	0.00	3.41
2964	3392	4.798682	TCCGCCCTCCCCTTCCTC	62.799	72.222	0.00	0.00	0.00	3.71
2965	3393	4.348495	TTCCGCCCTCCCCTTCCT	62.348	66.667	0.00	0.00	0.00	3.36
2966	3394	3.798511	CTTCCGCCCTCCCCTTCC	61.799	72.222	0.00	0.00	0.00	3.46
2967	3395	3.798511	CCTTCCGCCCTCCCCTTC	61.799	72.222	0.00	0.00	0.00	3.46
3024	3452	2.492599	TTTCCCCTCCTCCCCTCCTG	62.493	65.000	0.00	0.00	0.00	3.86
3025	3453	2.191846	TTTCCCCTCCTCCCCTCCT	61.192	63.158	0.00	0.00	0.00	3.69
3026	3454	2.001838	GTTTCCCCTCCTCCCCTCC	61.002	68.421	0.00	0.00	0.00	4.30
3027	3455	2.001838	GGTTTCCCCTCCTCCCCTC	61.002	68.421	0.00	0.00	0.00	4.30
3028	3456	2.127528	GGTTTCCCCTCCTCCCCT	59.872	66.667	0.00	0.00	0.00	4.79
3038	3466	1.335882	ACTAGGCGCTAGGGTTTCCC	61.336	60.000	7.64	0.95	45.90	3.97
3039	3467	0.104487	GACTAGGCGCTAGGGTTTCC	59.896	60.000	7.64	1.31	38.30	3.13
3040	3468	0.248949	CGACTAGGCGCTAGGGTTTC	60.249	60.000	4.31	0.46	38.30	2.78
3041	3469	1.814527	CGACTAGGCGCTAGGGTTT	59.185	57.895	4.31	0.00	38.30	3.27
3042	3470	3.522808	CGACTAGGCGCTAGGGTT	58.477	61.111	4.31	0.24	38.30	4.11
3063	3491	0.038310	AGTAAAACTCTGGCCCAGGC	59.962	55.000	11.68	0.00	41.06	4.85
3064	3492	2.572104	AGTAGTAAAACTCTGGCCCAGG	59.428	50.000	11.68	4.22	31.51	4.45
3065	3493	3.600388	CAGTAGTAAAACTCTGGCCCAG	58.400	50.000	3.69	3.69	0.00	4.45
3066	3494	2.290071	GCAGTAGTAAAACTCTGGCCCA	60.290	50.000	0.00	0.00	29.84	5.36
3067	3495	2.357075	GCAGTAGTAAAACTCTGGCCC	58.643	52.381	0.00	0.00	29.84	5.80
3068	3496	2.000447	CGCAGTAGTAAAACTCTGGCC	59.000	52.381	0.00	0.00	29.84	5.36
3069	3497	2.000447	CCGCAGTAGTAAAACTCTGGC	59.000	52.381	0.00	0.00	29.84	4.85
3070	3498	2.000447	GCCGCAGTAGTAAAACTCTGG	59.000	52.381	0.00	0.00	29.84	3.86
3071	3499	1.654105	CGCCGCAGTAGTAAAACTCTG	59.346	52.381	0.00	0.00	31.25	3.35
3072	3500	1.992170	CGCCGCAGTAGTAAAACTCT	58.008	50.000	0.00	0.00	0.00	3.24
3073	3501	0.369248	GCGCCGCAGTAGTAAAACTC	59.631	55.000	3.15	0.00	0.00	3.01
3074	3502	1.349259	CGCGCCGCAGTAGTAAAACT	61.349	55.000	10.75	0.00	0.00	2.66
3075	3503	1.058284	CGCGCCGCAGTAGTAAAAC	59.942	57.895	10.75	0.00	0.00	2.43
3076	3504	3.465753	CGCGCCGCAGTAGTAAAA	58.534	55.556	10.75	0.00	0.00	1.52
3094	3522	1.609783	CTAAAGCCACCAGGGGAGG	59.390	63.158	0.00	0.00	36.51	4.30
3095	3523	0.914417	TCCTAAAGCCACCAGGGGAG	60.914	60.000	0.00	0.00	37.04	4.30
3096	3524	0.253630	ATCCTAAAGCCACCAGGGGA	60.254	55.000	0.00	0.00	37.04	4.81
3097	3525	0.631212	AATCCTAAAGCCACCAGGGG	59.369	55.000	0.00	0.00	37.04	4.79
3098	3526	2.532250	AAATCCTAAAGCCACCAGGG	57.468	50.000	0.00	0.00	40.85	4.45
3099	3527	3.699538	GGTAAAATCCTAAAGCCACCAGG	59.300	47.826	0.00	0.00	38.23	4.45
3100	3528	3.699538	GGGTAAAATCCTAAAGCCACCAG	59.300	47.826	0.00	0.00	0.00	4.00
3101	3529	3.335484	AGGGTAAAATCCTAAAGCCACCA	59.665	43.478	0.00	0.00	31.86	4.17
3102	3530	3.952323	GAGGGTAAAATCCTAAAGCCACC	59.048	47.826	0.00	0.00	34.21	4.61
3103	3531	3.952323	GGAGGGTAAAATCCTAAAGCCAC	59.048	47.826	0.00	0.00	34.21	5.01
3104	3532	3.053170	GGGAGGGTAAAATCCTAAAGCCA	60.053	47.826	0.00	0.00	35.80	4.75
3105	3533	3.563223	GGGAGGGTAAAATCCTAAAGCC	58.437	50.000	0.00	0.00	35.80	4.35
3106	3534	3.211865	CGGGAGGGTAAAATCCTAAAGC	58.788	50.000	0.00	0.00	35.80	3.51
3122	3550	4.130118	CCAGATCTTGTTTATTCCGGGAG	58.870	47.826	0.00	0.00	0.00	4.30
3123	3551	3.684413	GCCAGATCTTGTTTATTCCGGGA	60.684	47.826	0.00	0.00	0.00	5.14
3124	3552	2.618709	GCCAGATCTTGTTTATTCCGGG	59.381	50.000	0.00	0.00	0.00	5.73
3125	3553	3.545703	AGCCAGATCTTGTTTATTCCGG	58.454	45.455	0.00	0.00	0.00	5.14
3126	3554	5.106157	ACAAAGCCAGATCTTGTTTATTCCG	60.106	40.000	0.00	0.00	0.00	4.30
3127	3555	6.272822	ACAAAGCCAGATCTTGTTTATTCC	57.727	37.500	0.00	0.00	0.00	3.01
3128	3556	8.515414	AGTAACAAAGCCAGATCTTGTTTATTC	58.485	33.333	13.45	4.94	0.00	1.75
3129	3557	8.409358	AGTAACAAAGCCAGATCTTGTTTATT	57.591	30.769	13.45	6.56	0.00	1.40
3130	3558	7.121315	GGAGTAACAAAGCCAGATCTTGTTTAT	59.879	37.037	13.45	4.86	0.00	1.40
3131	3559	6.430000	GGAGTAACAAAGCCAGATCTTGTTTA	59.570	38.462	13.45	0.68	0.00	2.01
3132	3560	5.241728	GGAGTAACAAAGCCAGATCTTGTTT	59.758	40.000	13.45	2.85	0.00	2.83
3133	3561	4.762251	GGAGTAACAAAGCCAGATCTTGTT	59.238	41.667	12.93	12.93	0.00	2.83
3134	3562	4.042187	AGGAGTAACAAAGCCAGATCTTGT	59.958	41.667	0.00	0.00	0.00	3.16
3135	3563	4.583871	AGGAGTAACAAAGCCAGATCTTG	58.416	43.478	0.00	0.00	0.00	3.02
3136	3564	4.323868	GGAGGAGTAACAAAGCCAGATCTT	60.324	45.833	0.00	0.00	0.00	2.40
3137	3565	3.198853	GGAGGAGTAACAAAGCCAGATCT	59.801	47.826	0.00	0.00	0.00	2.75
3138	3566	3.536570	GGAGGAGTAACAAAGCCAGATC	58.463	50.000	0.00	0.00	0.00	2.75
3139	3567	2.239907	GGGAGGAGTAACAAAGCCAGAT	59.760	50.000	0.00	0.00	0.00	2.90
3140	3568	1.628846	GGGAGGAGTAACAAAGCCAGA	59.371	52.381	0.00	0.00	0.00	3.86
3141	3569	1.340114	GGGGAGGAGTAACAAAGCCAG	60.340	57.143	0.00	0.00	0.00	4.85
3142	3570	0.696501	GGGGAGGAGTAACAAAGCCA	59.303	55.000	0.00	0.00	0.00	4.75
3143	3571	0.992695	AGGGGAGGAGTAACAAAGCC	59.007	55.000	0.00	0.00	0.00	4.35
3144	3572	2.881111	AAGGGGAGGAGTAACAAAGC	57.119	50.000	0.00	0.00	0.00	3.51
3145	3573	5.437946	GGATTAAGGGGAGGAGTAACAAAG	58.562	45.833	0.00	0.00	0.00	2.77
3146	3574	4.228895	GGGATTAAGGGGAGGAGTAACAAA	59.771	45.833	0.00	0.00	0.00	2.83
3147	3575	3.784202	GGGATTAAGGGGAGGAGTAACAA	59.216	47.826	0.00	0.00	0.00	2.83
3148	3576	3.390819	GGGATTAAGGGGAGGAGTAACA	58.609	50.000	0.00	0.00	0.00	2.41
3149	3577	2.367894	CGGGATTAAGGGGAGGAGTAAC	59.632	54.545	0.00	0.00	0.00	2.50
3150	3578	2.022722	ACGGGATTAAGGGGAGGAGTAA	60.023	50.000	0.00	0.00	0.00	2.24
3151	3579	1.577242	ACGGGATTAAGGGGAGGAGTA	59.423	52.381	0.00	0.00	0.00	2.59
3152	3580	0.342313	ACGGGATTAAGGGGAGGAGT	59.658	55.000	0.00	0.00	0.00	3.85
3153	3581	1.049402	GACGGGATTAAGGGGAGGAG	58.951	60.000	0.00	0.00	0.00	3.69
3154	3582	0.399519	GGACGGGATTAAGGGGAGGA	60.400	60.000	0.00	0.00	0.00	3.71
3155	3583	0.693092	TGGACGGGATTAAGGGGAGG	60.693	60.000	0.00	0.00	0.00	4.30
3156	3584	1.072331	CATGGACGGGATTAAGGGGAG	59.928	57.143	0.00	0.00	0.00	4.30
3157	3585	1.136828	CATGGACGGGATTAAGGGGA	58.863	55.000	0.00	0.00	0.00	4.81
3158	3586	0.110486	CCATGGACGGGATTAAGGGG	59.890	60.000	5.56	0.00	0.00	4.79
3159	3587	0.537371	GCCATGGACGGGATTAAGGG	60.537	60.000	18.40	0.00	0.00	3.95
3160	3588	0.884704	CGCCATGGACGGGATTAAGG	60.885	60.000	18.40	0.00	0.00	2.69
3161	3589	2.616969	CGCCATGGACGGGATTAAG	58.383	57.895	18.40	0.00	0.00	1.85
3162	3590	4.868026	CGCCATGGACGGGATTAA	57.132	55.556	18.40	0.00	0.00	1.40
3170	3598	4.195334	ATCCCAGCCGCCATGGAC	62.195	66.667	18.40	5.97	40.51	4.02
3171	3599	4.193893	CATCCCAGCCGCCATGGA	62.194	66.667	18.40	0.00	40.51	3.41
3173	3601	3.719646	TTCCATCCCAGCCGCCATG	62.720	63.158	0.00	0.00	0.00	3.66
3174	3602	3.419580	TTCCATCCCAGCCGCCAT	61.420	61.111	0.00	0.00	0.00	4.40
3175	3603	4.113815	CTTCCATCCCAGCCGCCA	62.114	66.667	0.00	0.00	0.00	5.69
3176	3604	4.883354	CCTTCCATCCCAGCCGCC	62.883	72.222	0.00	0.00	0.00	6.13
3177	3605	4.883354	CCCTTCCATCCCAGCCGC	62.883	72.222	0.00	0.00	0.00	6.53
3178	3606	4.195334	CCCCTTCCATCCCAGCCG	62.195	72.222	0.00	0.00	0.00	5.52
3179	3607	4.529731	GCCCCTTCCATCCCAGCC	62.530	72.222	0.00	0.00	0.00	4.85
3180	3608	3.728292	CTGCCCCTTCCATCCCAGC	62.728	68.421	0.00	0.00	0.00	4.85
3181	3609	2.599597	CTGCCCCTTCCATCCCAG	59.400	66.667	0.00	0.00	0.00	4.45
3182	3610	3.743017	GCTGCCCCTTCCATCCCA	61.743	66.667	0.00	0.00	0.00	4.37
3183	3611	3.301222	TTGCTGCCCCTTCCATCCC	62.301	63.158	0.00	0.00	0.00	3.85
3184	3612	1.755783	CTTGCTGCCCCTTCCATCC	60.756	63.158	0.00	0.00	0.00	3.51
3185	3613	0.323725	TTCTTGCTGCCCCTTCCATC	60.324	55.000	0.00	0.00	0.00	3.51
3186	3614	0.114954	TTTCTTGCTGCCCCTTCCAT	59.885	50.000	0.00	0.00	0.00	3.41
3187	3615	0.540365	CTTTCTTGCTGCCCCTTCCA	60.540	55.000	0.00	0.00	0.00	3.53
3188	3616	1.881903	GCTTTCTTGCTGCCCCTTCC	61.882	60.000	0.00	0.00	0.00	3.46
3189	3617	1.181098	TGCTTTCTTGCTGCCCCTTC	61.181	55.000	0.00	0.00	0.00	3.46
3190	3618	1.152483	TGCTTTCTTGCTGCCCCTT	60.152	52.632	0.00	0.00	0.00	3.95
3191	3619	1.605738	CTGCTTTCTTGCTGCCCCT	60.606	57.895	0.00	0.00	0.00	4.79
3192	3620	0.969409	ATCTGCTTTCTTGCTGCCCC	60.969	55.000	0.00	0.00	32.95	5.80
3193	3621	0.455005	GATCTGCTTTCTTGCTGCCC	59.545	55.000	0.00	0.00	32.95	5.36
3194	3622	0.455005	GGATCTGCTTTCTTGCTGCC	59.545	55.000	0.00	0.00	32.95	4.85
3195	3623	0.098376	CGGATCTGCTTTCTTGCTGC	59.902	55.000	0.00	0.00	32.95	5.25
3196	3624	1.664659	CTCGGATCTGCTTTCTTGCTG	59.335	52.381	0.00	0.00	0.00	4.41
3197	3625	1.406614	CCTCGGATCTGCTTTCTTGCT	60.407	52.381	0.00	0.00	0.00	3.91
3198	3626	1.012841	CCTCGGATCTGCTTTCTTGC	58.987	55.000	0.00	0.00	0.00	4.01
3199	3627	1.012841	GCCTCGGATCTGCTTTCTTG	58.987	55.000	0.00	0.00	0.00	3.02
3200	3628	0.107459	GGCCTCGGATCTGCTTTCTT	60.107	55.000	0.00	0.00	0.00	2.52
3203	3631	1.977293	GAGGGCCTCGGATCTGCTTT	61.977	60.000	19.53	0.00	0.00	3.51
3209	3637	3.551407	GGTGGAGGGCCTCGGATC	61.551	72.222	26.54	12.76	34.31	3.36
3242	3670	1.639722	TGACCAAGGATCCGAAGTGA	58.360	50.000	5.98	0.00	0.00	3.41
3243	3671	2.283298	CATGACCAAGGATCCGAAGTG	58.717	52.381	5.98	3.54	0.00	3.16
3248	3676	0.107508	AGCACATGACCAAGGATCCG	60.108	55.000	5.98	0.00	0.00	4.18
3267	3695	1.609501	CAGTTCACGGGGGAGGAGA	60.610	63.158	0.00	0.00	0.00	3.71
3290	3718	3.983420	ACCAGCCCACCACCATGG	61.983	66.667	11.19	11.19	45.02	3.66
3291	3719	2.677524	CACCAGCCCACCACCATG	60.678	66.667	0.00	0.00	0.00	3.66
3292	3720	3.983420	CCACCAGCCCACCACCAT	61.983	66.667	0.00	0.00	0.00	3.55
3303	3731	1.364901	CCAAAACTGCTGCCACCAG	59.635	57.895	0.00	0.00	42.13	4.00
3304	3732	1.381056	ACCAAAACTGCTGCCACCA	60.381	52.632	0.00	0.00	0.00	4.17
3305	3733	1.067916	CACCAAAACTGCTGCCACC	59.932	57.895	0.00	0.00	0.00	4.61
3306	3734	1.067916	CCACCAAAACTGCTGCCAC	59.932	57.895	0.00	0.00	0.00	5.01
3307	3735	1.076412	TCCACCAAAACTGCTGCCA	60.076	52.632	0.00	0.00	0.00	4.92
3308	3736	1.662044	CTCCACCAAAACTGCTGCC	59.338	57.895	0.00	0.00	0.00	4.85
3309	3737	0.823356	TCCTCCACCAAAACTGCTGC	60.823	55.000	0.00	0.00	0.00	5.25
3310	3738	1.915141	ATCCTCCACCAAAACTGCTG	58.085	50.000	0.00	0.00	0.00	4.41
3311	3739	2.242043	CAATCCTCCACCAAAACTGCT	58.758	47.619	0.00	0.00	0.00	4.24
3312	3740	1.337167	GCAATCCTCCACCAAAACTGC	60.337	52.381	0.00	0.00	0.00	4.40
3313	3741	2.029649	CAGCAATCCTCCACCAAAACTG	60.030	50.000	0.00	0.00	0.00	3.16
3314	3742	2.242043	CAGCAATCCTCCACCAAAACT	58.758	47.619	0.00	0.00	0.00	2.66
3324	3752	1.399791	GTACAAGCAGCAGCAATCCTC	59.600	52.381	3.17	0.00	45.49	3.71
3333	3761	2.236893	TCAGATCCATGTACAAGCAGCA	59.763	45.455	0.00	0.00	0.00	4.41
3335	3763	3.624861	GGTTCAGATCCATGTACAAGCAG	59.375	47.826	0.00	0.00	0.00	4.24
3343	3771	1.673767	ACAGGGGTTCAGATCCATGT	58.326	50.000	5.16	5.16	42.34	3.21
3359	3787	7.303998	CAAAGCAAGAAGAGGATAAAGAACAG	58.696	38.462	0.00	0.00	0.00	3.16
3361	3789	6.207614	ACCAAAGCAAGAAGAGGATAAAGAAC	59.792	38.462	0.00	0.00	0.00	3.01
3379	3807	0.100503	ACGAACAAGCACACCAAAGC	59.899	50.000	0.00	0.00	0.00	3.51
3390	3818	3.599343	TCAGATCCATGGAACGAACAAG	58.401	45.455	20.67	5.09	0.00	3.16
3397	3825	1.566231	AGGGGTTCAGATCCATGGAAC	59.434	52.381	20.67	17.06	40.04	3.62
3399	3827	1.216064	CAGGGGTTCAGATCCATGGA	58.784	55.000	18.88	18.88	31.87	3.41
3400	3828	0.921896	ACAGGGGTTCAGATCCATGG	59.078	55.000	4.97	4.97	38.95	3.66
3401	3829	2.814805	AACAGGGGTTCAGATCCATG	57.185	50.000	0.00	2.19	40.30	3.66
3412	3840	2.989571	AGGATGAAAAGAGAACAGGGGT	59.010	45.455	0.00	0.00	0.00	4.95
3439	3867	2.550830	TGTTGAAGAGCTGAAGGGAC	57.449	50.000	0.00	0.00	0.00	4.46
3449	3877	3.996150	ACAGTTGCCAATGTTGAAGAG	57.004	42.857	0.00	0.00	0.00	2.85
3460	4173	1.142870	AGCAGGAAGTTACAGTTGCCA	59.857	47.619	0.00	0.00	32.21	4.92
3461	4174	1.897560	AGCAGGAAGTTACAGTTGCC	58.102	50.000	0.00	0.00	32.21	4.52
3466	4179	5.471456	AGAATGTCAAAGCAGGAAGTTACAG	59.529	40.000	0.00	0.00	0.00	2.74
3478	4191	8.470002	ACCTGGAATTTATTAGAATGTCAAAGC	58.530	33.333	0.00	0.00	0.00	3.51
3494	4207	5.556915	TCGTCAATCTTGTACCTGGAATTT	58.443	37.500	0.00	0.00	0.00	1.82
3579	4292	0.396811	GTACCCACAAGTCCAGCAGT	59.603	55.000	0.00	0.00	0.00	4.40
3740	4456	6.721318	AGAGACAGGAATAAATGCCTTACAA	58.279	36.000	0.00	0.00	30.41	2.41
4099	5020	4.953579	ACTCCCAAGCAAAGTTTACTTGAA	59.046	37.500	24.26	13.74	42.71	2.69
4150	5164	9.269453	TCTTGCTTGATTAGATTGATACATCTG	57.731	33.333	0.00	0.00	0.00	2.90
4249	5381	1.207089	TGTTATGGCGCTGCTAGAAGT	59.793	47.619	7.64	0.00	0.00	3.01
4397	5529	2.897350	GCGGTGTAGATGGCCAGC	60.897	66.667	14.72	14.72	0.00	4.85
4398	5530	2.586079	CGCGGTGTAGATGGCCAG	60.586	66.667	13.05	0.00	0.00	4.85
4399	5531	3.365291	GACGCGGTGTAGATGGCCA	62.365	63.158	8.56	8.56	0.00	5.36
4400	5532	2.585247	GACGCGGTGTAGATGGCC	60.585	66.667	12.47	0.00	0.00	5.36
4401	5533	2.954868	CGACGCGGTGTAGATGGC	60.955	66.667	12.47	0.00	0.00	4.40
4402	5534	2.954868	GCGACGCGGTGTAGATGG	60.955	66.667	12.47	0.00	0.00	3.51
4403	5535	2.102357	AGCGACGCGGTGTAGATG	59.898	61.111	15.18	0.00	35.85	2.90
4459	5591	4.408821	GCATCTGGGTGGTGGCGA	62.409	66.667	0.00	0.00	0.00	5.54
5436	7504	4.475135	GGGAAGAGTGGCGGGCTC	62.475	72.222	2.38	0.00	0.00	4.70
5442	7510	2.743928	CGCACAGGGAAGAGTGGC	60.744	66.667	0.00	0.00	36.29	5.01
5476	7544	3.483869	GCCTTCTCCCTGCCGGAT	61.484	66.667	5.05	0.00	41.00	4.18
5593	7661	2.093288	AGGAGTGCATGTGTATGACCAG	60.093	50.000	0.00	0.00	36.36	4.00
5645	7713	1.281199	CCTGGATCCCATGGACACCA	61.281	60.000	15.22	17.02	38.48	4.17
5646	7714	1.281925	ACCTGGATCCCATGGACACC	61.282	60.000	15.22	13.24	32.98	4.16
5647	7715	0.107017	CACCTGGATCCCATGGACAC	60.107	60.000	15.22	3.30	32.98	3.67
5648	7716	1.281199	CCACCTGGATCCCATGGACA	61.281	60.000	15.22	5.78	36.14	4.02
5649	7717	1.533711	CCACCTGGATCCCATGGAC	59.466	63.158	15.22	4.08	36.14	4.02
5650	7718	2.386100	GCCACCTGGATCCCATGGA	61.386	63.158	23.69	0.00	36.14	3.41
5651	7719	2.196776	GCCACCTGGATCCCATGG	59.803	66.667	17.77	17.77	36.90	3.66
5652	7720	1.152819	CAGCCACCTGGATCCCATG	60.153	63.158	9.90	4.63	37.39	3.66
5653	7721	0.327480	TACAGCCACCTGGATCCCAT	60.327	55.000	9.90	0.00	43.53	4.00
5654	7722	1.082019	TACAGCCACCTGGATCCCA	59.918	57.895	9.90	0.00	43.53	4.37
5655	7723	1.271840	TGTACAGCCACCTGGATCCC	61.272	60.000	9.90	0.00	43.53	3.85
5656	7724	0.107654	GTGTACAGCCACCTGGATCC	60.108	60.000	4.20	4.20	43.53	3.36
5657	7725	0.460284	CGTGTACAGCCACCTGGATC	60.460	60.000	0.00	0.00	43.53	3.36
5658	7726	1.192146	ACGTGTACAGCCACCTGGAT	61.192	55.000	0.00	0.00	43.53	3.41
5659	7727	1.835267	ACGTGTACAGCCACCTGGA	60.835	57.895	0.00	0.00	43.53	3.86
5660	7728	1.667830	CACGTGTACAGCCACCTGG	60.668	63.158	7.58	0.00	43.53	4.45
5661	7729	2.317609	GCACGTGTACAGCCACCTG	61.318	63.158	18.38	0.00	44.80	4.00
5662	7730	2.030562	GCACGTGTACAGCCACCT	59.969	61.111	18.38	0.00	31.47	4.00
5663	7731	2.280524	TGCACGTGTACAGCCACC	60.281	61.111	18.38	0.00	31.47	4.61
5664	7732	2.935955	GTGCACGTGTACAGCCAC	59.064	61.111	28.64	17.19	0.00	5.01
5721	7789	3.078837	GGACTGGGACGCTTTATTTTGA	58.921	45.455	0.00	0.00	0.00	2.69
5782	7850	0.317603	AAACACGACACGACTCGAGG	60.318	55.000	18.41	1.82	37.11	4.63
5783	7851	1.474017	AAAACACGACACGACTCGAG	58.526	50.000	11.84	11.84	37.11	4.04
5784	7852	1.912001	AAAAACACGACACGACTCGA	58.088	45.000	5.20	0.00	37.11	4.04
5856	7926	8.729756	CAAATTGATACTGTTGGATCAGTGTTA	58.270	33.333	9.21	0.00	46.36	2.41
5937	8007	9.881529	GTTTTTGTATGTAAGGTACATTTCGAA	57.118	29.630	0.00	0.00	46.69	3.71
5940	8010	9.620660	CTGGTTTTTGTATGTAAGGTACATTTC	57.379	33.333	0.00	0.00	46.69	2.17
5951	8021	5.073965	ACTTCTCCCCTGGTTTTTGTATGTA	59.926	40.000	0.00	0.00	0.00	2.29
5959	8029	0.555769	TGCACTTCTCCCCTGGTTTT	59.444	50.000	0.00	0.00	0.00	2.43
5966	8038	0.962855	GCCTTCTTGCACTTCTCCCC	60.963	60.000	0.00	0.00	0.00	4.81
5983	8055	0.881796	GGCAACTTGACTGTAAGGCC	59.118	55.000	0.00	0.00	46.74	5.19
6004	8076	1.404391	CAGTTGGCTCATGATCTTGGC	59.596	52.381	8.60	10.15	0.00	4.52
6023	8103	9.613428	CTTTAGTTCTGTATAAATGACCCATCA	57.387	33.333	0.00	0.00	39.83	3.07
6087	8167	7.549615	TGATGAATTCTGCAAACTGATCTAG	57.450	36.000	7.05	0.00	0.00	2.43
6129	8271	4.280436	TCCCTTCTGCGTTTTAATCTGA	57.720	40.909	0.00	0.00	0.00	3.27
6137	8279	4.099419	AGTCAAAAATTCCCTTCTGCGTTT	59.901	37.500	0.00	0.00	0.00	3.60
6141	8283	3.320626	GCAGTCAAAAATTCCCTTCTGC	58.679	45.455	0.00	0.00	39.73	4.26
6152	8294	1.314730	GGGGAACTCGCAGTCAAAAA	58.685	50.000	0.00	0.00	0.00	1.94
6169	8311	1.185315	ATCATGTTCAAAAGGGCGGG	58.815	50.000	0.00	0.00	0.00	6.13
6197	8339	7.085797	GTGCGAATTTATAATTCTGCACATG	57.914	36.000	29.98	12.55	45.76	3.21
6214	8356	2.093890	TGATCATTTGGCAGTGCGAAT	58.906	42.857	13.63	10.98	0.00	3.34
6253	8395	8.475331	CTTTGATTTTGCAAAGCTATCTGATT	57.525	30.769	18.46	0.00	45.52	2.57
6265	8428	6.258287	CCACAATTCAGACTTTGATTTTGCAA	59.742	34.615	0.00	0.00	34.82	4.08
6292	8455	2.878089	TACAGTGGCAGGCGAGCAA	61.878	57.895	7.25	0.00	35.83	3.91
6347	8510	3.823281	TGTTTCGACAGGTAAGTTGGA	57.177	42.857	0.00	0.00	0.00	3.53
6353	8516	4.647611	ACATCCATTGTTTCGACAGGTAA	58.352	39.130	0.00	0.00	33.74	2.85
6357	8520	7.203218	TCTAGATACATCCATTGTTTCGACAG	58.797	38.462	0.00	0.00	40.16	3.51
6397	8570	6.644347	ACTTGTCGAAGAAATGGATGTATCT	58.356	36.000	0.00	0.00	39.69	1.98
6415	8588	2.537401	CTCCGACCGGAATTACTTGTC	58.463	52.381	9.46	0.00	44.66	3.18
6444	8617	6.035220	TCACGTTGACAGCTTTATTTATACGG	59.965	38.462	0.00	0.00	0.00	4.02
6458	8631	3.914312	ACCTACTTCATCACGTTGACAG	58.086	45.455	0.00	0.00	0.00	3.51
6528	8701	9.578439	GACTGTAGGTCTAATATAAACGTTTGT	57.422	33.333	23.46	19.04	41.46	2.83
6533	8706	8.411683	ACTTGGACTGTAGGTCTAATATAAACG	58.588	37.037	0.00	0.00	42.88	3.60
6586	8771	9.135189	TCTTTATTTGCTATCACAGGCATATTT	57.865	29.630	0.00	0.00	38.30	1.40
6630	8816	3.637998	TCAGTACTGAGAACGGTCAAC	57.362	47.619	21.74	0.00	36.89	3.18
6638	8843	6.345096	TGATGACACATTCAGTACTGAGAA	57.655	37.500	23.97	12.37	41.13	2.87
6679	8884	7.549842	CAGATCATTGCCAATTTTCCATAACAA	59.450	33.333	0.00	0.00	0.00	2.83
6746	8972	1.453900	GCGTGGCGTGTTAAAATTTGG	59.546	47.619	0.00	0.00	0.00	3.28
6795	9021	9.378551	TGGATAAGTTAGACATATTTGTGTGAC	57.621	33.333	0.00	0.00	36.30	3.67
6830	10979	0.101399	AAAACACGCCGCACAAATGA	59.899	45.000	0.00	0.00	0.00	2.57
6839	10988	0.596082	ATCTTGGGAAAAACACGCCG	59.404	50.000	0.00	0.00	0.00	6.46
6872	11036	7.524294	AAAAATATTGCAGGTTAAAGCATCG	57.476	32.000	0.00	0.00	40.94	3.84
6965	11136	8.000709	TCTTATAATGTCCCATGCTTCTTCATT	58.999	33.333	0.00	0.00	0.00	2.57
7040	11211	2.037772	AGATTGCAACGTCTTCCACTCT	59.962	45.455	0.00	0.00	0.00	3.24
7064	11235	6.643388	TGTGCTCATAGTGATAAGAACATGT	58.357	36.000	0.00	0.00	0.00	3.21
7113	11284	6.310467	CGTGAATAACCTTCTCGAATCTTCAA	59.690	38.462	4.02	0.00	37.54	2.69
7278	11457	4.408921	TCCGTATGTTCTCCCAATCATTCT	59.591	41.667	0.00	0.00	0.00	2.40
7313	11492	1.551329	GGGGTTTATGGCAAACTGGGA	60.551	52.381	0.00	0.00	0.00	4.37
7661	11843	6.423302	GTCATGTCTTCAGAACTATATGCCAG	59.577	42.308	0.00	0.00	0.00	4.85
7730	11915	6.222038	TGTTATCCTATCAACCTGTGAGAC	57.778	41.667	0.00	0.00	40.43	3.36
7737	11922	8.934023	TGTTTTCTTTGTTATCCTATCAACCT	57.066	30.769	0.00	0.00	0.00	3.50
7757	11942	7.114754	TCTGAAGCTCTCCATGATATTGTTTT	58.885	34.615	0.00	0.00	0.00	2.43
7773	11958	6.222389	ACTTGTGATATGCTATCTGAAGCTC	58.778	40.000	11.29	4.21	43.19	4.09
7776	11961	6.145209	CCGAACTTGTGATATGCTATCTGAAG	59.855	42.308	0.00	8.04	0.00	3.02

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.