Multiple sequence alignment - TraesCS6B01G387900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G387900 chr6B 100.000 4619 0 0 811 5429 662564109 662559491 0.000000e+00 8530
1 TraesCS6B01G387900 chr6B 100.000 492 0 0 1 492 662564919 662564428 0.000000e+00 909
2 TraesCS6B01G387900 chr6B 88.000 175 11 7 150 318 647470010 647469840 1.190000e-46 198
3 TraesCS6B01G387900 chr6B 87.571 177 13 7 141 313 681219897 681220068 4.290000e-46 196
4 TraesCS6B01G387900 chr6D 92.962 3694 191 27 1043 4690 437817957 437814287 0.000000e+00 5317
5 TraesCS6B01G387900 chr6D 84.697 379 29 13 4903 5259 437814076 437813705 8.650000e-93 351
6 TraesCS6B01G387900 chr6D 96.610 177 6 0 316 492 437818632 437818456 1.480000e-75 294
7 TraesCS6B01G387900 chr6D 94.681 188 5 4 5245 5429 437813690 437813505 2.470000e-73 287
8 TraesCS6B01G387900 chr6D 94.595 148 8 0 1 148 437818774 437818627 4.230000e-56 230
9 TraesCS6B01G387900 chr6A 92.520 2540 147 20 1052 3570 586112055 586109538 0.000000e+00 3598
10 TraesCS6B01G387900 chr6A 90.403 1365 102 12 3351 4690 586109703 586108343 0.000000e+00 1768
11 TraesCS6B01G387900 chr6A 93.211 545 17 8 4892 5429 586108122 586107591 0.000000e+00 784
12 TraesCS6B01G387900 chr6A 95.946 148 6 0 1 148 586112680 586112533 1.950000e-59 241
13 TraesCS6B01G387900 chr6A 91.925 161 12 1 316 476 586112538 586112379 1.970000e-54 224
14 TraesCS6B01G387900 chr7A 85.143 525 69 6 3351 3867 574168019 574168542 3.720000e-146 529
15 TraesCS6B01G387900 chr7A 94.754 305 16 0 4017 4321 574168542 574168846 4.920000e-130 475
16 TraesCS6B01G387900 chr7A 82.222 270 26 14 3314 3570 574167924 574168184 4.260000e-51 213
17 TraesCS6B01G387900 chr1D 92.276 246 10 5 1526 1763 450715683 450715927 1.870000e-89 340
18 TraesCS6B01G387900 chr3D 91.837 245 13 3 1526 1763 350635858 350635614 8.710000e-88 335
19 TraesCS6B01G387900 chr3D 90.612 245 15 4 1526 1763 99195759 99196002 8.780000e-83 318
20 TraesCS6B01G387900 chr7D 89.796 245 18 3 1526 1763 61433601 61433357 1.900000e-79 307
21 TraesCS6B01G387900 chr5D 96.104 154 4 2 2005 2156 198258359 198258206 3.250000e-62 250
22 TraesCS6B01G387900 chr2B 92.899 169 6 3 148 316 775407183 775407021 1.950000e-59 241
23 TraesCS6B01G387900 chr2B 87.574 169 14 5 149 313 64060548 64060713 7.180000e-44 189
24 TraesCS6B01G387900 chr5B 92.727 165 8 2 149 313 139144308 139144468 9.090000e-58 235
25 TraesCS6B01G387900 chr5B 88.554 166 12 5 149 310 325951480 325951642 1.540000e-45 195
26 TraesCS6B01G387900 chr3B 89.714 175 11 5 143 313 178501420 178501591 3.290000e-52 217
27 TraesCS6B01G387900 chr7B 88.571 175 13 5 148 318 125574649 125574820 7.130000e-49 206
28 TraesCS6B01G387900 chr7B 87.931 174 14 5 148 317 89675551 89675721 1.190000e-46 198


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G387900 chr6B 662559491 662564919 5428 True 4719.500000 8530 100.000 1 5429 2 chr6B.!!$R2 5428
1 TraesCS6B01G387900 chr6D 437813505 437818774 5269 True 1295.800000 5317 92.709 1 5429 5 chr6D.!!$R1 5428
2 TraesCS6B01G387900 chr6A 586107591 586112680 5089 True 1323.000000 3598 92.801 1 5429 5 chr6A.!!$R1 5428
3 TraesCS6B01G387900 chr7A 574167924 574168846 922 False 405.666667 529 87.373 3314 4321 3 chr7A.!!$F1 1007

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
200 201 0.032813 CATGGCCCACCCTGAGATTT 60.033 55.0 0.0 0.0 33.64 2.17 F
201 202 0.032813 ATGGCCCACCCTGAGATTTG 60.033 55.0 0.0 0.0 33.59 2.32 F
284 285 0.034089 AGTAGCATTCTTGGCCCACC 60.034 55.0 0.0 0.0 0.00 4.61 F
1508 1762 0.108662 GGCCCTGATTTTTGCTTCGG 60.109 55.0 0.0 0.0 0.00 4.30 F
2911 3191 0.802607 GCGCTCCAGAGTTACTTCCG 60.803 60.0 0.0 0.0 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1477 1731 0.263765 TCAGGGCCCTATTCCGTACT 59.736 55.00 28.13 0.0 0.00 2.73 R
2158 2437 1.033746 ATGAATTGCAGGCCGGTCAG 61.034 55.00 9.71 0.0 0.00 3.51 R
2248 2527 4.517285 AGATGGTGAAGAATTACACGCAT 58.483 39.13 0.00 0.0 37.82 4.73 R
3148 3433 0.745845 CATCAGAAGGTCCCTTGCCG 60.746 60.00 2.65 0.0 36.26 5.69 R
4894 5335 0.036294 GACTCCAGTGCCAGGTTACC 60.036 60.00 0.00 0.0 0.00 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
87 88 2.673368 GTGTCGGAAGATCACACATTCC 59.327 50.000 8.06 4.84 45.19 3.01
143 144 4.556592 AACACCTTAGTAATAACCGCCA 57.443 40.909 0.00 0.00 0.00 5.69
147 148 2.861935 CCTTAGTAATAACCGCCACACG 59.138 50.000 0.00 0.00 43.15 4.49
148 149 1.925229 TAGTAATAACCGCCACACGC 58.075 50.000 0.00 0.00 41.76 5.34
149 150 0.037139 AGTAATAACCGCCACACGCA 60.037 50.000 0.00 0.00 41.76 5.24
150 151 0.372334 GTAATAACCGCCACACGCAG 59.628 55.000 0.00 0.00 41.76 5.18
163 164 3.972368 ACGCAGTGGTAGAGGTAGA 57.028 52.632 0.00 0.00 42.51 2.59
164 165 1.752683 ACGCAGTGGTAGAGGTAGAG 58.247 55.000 0.00 0.00 42.51 2.43
165 166 1.025812 CGCAGTGGTAGAGGTAGAGG 58.974 60.000 0.00 0.00 0.00 3.69
166 167 1.404843 GCAGTGGTAGAGGTAGAGGG 58.595 60.000 0.00 0.00 0.00 4.30
167 168 1.342175 GCAGTGGTAGAGGTAGAGGGT 60.342 57.143 0.00 0.00 0.00 4.34
168 169 2.379972 CAGTGGTAGAGGTAGAGGGTG 58.620 57.143 0.00 0.00 0.00 4.61
169 170 1.288335 AGTGGTAGAGGTAGAGGGTGG 59.712 57.143 0.00 0.00 0.00 4.61
170 171 1.006878 GTGGTAGAGGTAGAGGGTGGT 59.993 57.143 0.00 0.00 0.00 4.16
171 172 1.287146 TGGTAGAGGTAGAGGGTGGTC 59.713 57.143 0.00 0.00 0.00 4.02
172 173 1.287146 GGTAGAGGTAGAGGGTGGTCA 59.713 57.143 0.00 0.00 0.00 4.02
173 174 2.657143 GTAGAGGTAGAGGGTGGTCAG 58.343 57.143 0.00 0.00 0.00 3.51
174 175 0.336737 AGAGGTAGAGGGTGGTCAGG 59.663 60.000 0.00 0.00 0.00 3.86
175 176 0.688087 GAGGTAGAGGGTGGTCAGGG 60.688 65.000 0.00 0.00 0.00 4.45
176 177 1.080538 GGTAGAGGGTGGTCAGGGT 59.919 63.158 0.00 0.00 0.00 4.34
177 178 1.265454 GGTAGAGGGTGGTCAGGGTG 61.265 65.000 0.00 0.00 0.00 4.61
178 179 1.080354 TAGAGGGTGGTCAGGGTGG 59.920 63.158 0.00 0.00 0.00 4.61
179 180 2.471084 TAGAGGGTGGTCAGGGTGGG 62.471 65.000 0.00 0.00 0.00 4.61
183 184 3.661648 GTGGTCAGGGTGGGCCAT 61.662 66.667 10.70 0.00 36.17 4.40
185 186 4.447342 GGTCAGGGTGGGCCATGG 62.447 72.222 10.70 7.63 45.85 3.66
196 197 4.828296 GCCATGGCCCACCCTGAG 62.828 72.222 27.24 0.00 33.64 3.35
197 198 3.016971 CCATGGCCCACCCTGAGA 61.017 66.667 0.00 0.00 33.64 3.27
198 199 2.389449 CCATGGCCCACCCTGAGAT 61.389 63.158 0.00 0.00 33.64 2.75
199 200 1.616921 CATGGCCCACCCTGAGATT 59.383 57.895 0.00 0.00 33.64 2.40
200 201 0.032813 CATGGCCCACCCTGAGATTT 60.033 55.000 0.00 0.00 33.64 2.17
201 202 0.032813 ATGGCCCACCCTGAGATTTG 60.033 55.000 0.00 0.00 33.59 2.32
202 203 1.380380 GGCCCACCCTGAGATTTGG 60.380 63.158 0.00 0.00 0.00 3.28
203 204 1.691219 GCCCACCCTGAGATTTGGA 59.309 57.895 0.00 0.00 0.00 3.53
204 205 0.039618 GCCCACCCTGAGATTTGGAA 59.960 55.000 0.00 0.00 0.00 3.53
205 206 1.549950 GCCCACCCTGAGATTTGGAAA 60.550 52.381 0.00 0.00 0.00 3.13
206 207 2.889756 GCCCACCCTGAGATTTGGAAAT 60.890 50.000 0.00 0.00 0.00 2.17
207 208 3.627237 GCCCACCCTGAGATTTGGAAATA 60.627 47.826 0.00 0.00 0.00 1.40
208 209 4.210331 CCCACCCTGAGATTTGGAAATAG 58.790 47.826 0.00 0.00 0.00 1.73
209 210 4.210331 CCACCCTGAGATTTGGAAATAGG 58.790 47.826 0.00 0.00 0.00 2.57
210 211 4.325344 CCACCCTGAGATTTGGAAATAGGT 60.325 45.833 0.00 0.00 0.00 3.08
211 212 5.264395 CACCCTGAGATTTGGAAATAGGTT 58.736 41.667 0.00 0.00 0.00 3.50
212 213 5.716703 CACCCTGAGATTTGGAAATAGGTTT 59.283 40.000 0.00 0.00 0.00 3.27
213 214 6.211384 CACCCTGAGATTTGGAAATAGGTTTT 59.789 38.462 0.00 0.00 0.00 2.43
214 215 7.396055 CACCCTGAGATTTGGAAATAGGTTTTA 59.604 37.037 0.00 0.00 0.00 1.52
215 216 8.122481 ACCCTGAGATTTGGAAATAGGTTTTAT 58.878 33.333 0.00 0.00 0.00 1.40
216 217 9.640952 CCCTGAGATTTGGAAATAGGTTTTATA 57.359 33.333 0.00 0.00 0.00 0.98
271 272 8.731275 AGCAATGTATTATTTGTACAGTAGCA 57.269 30.769 0.00 0.00 35.69 3.49
272 273 9.342308 AGCAATGTATTATTTGTACAGTAGCAT 57.658 29.630 0.00 0.00 35.69 3.79
273 274 9.950680 GCAATGTATTATTTGTACAGTAGCATT 57.049 29.630 0.00 0.31 35.69 3.56
279 280 5.567138 ATTTGTACAGTAGCATTCTTGGC 57.433 39.130 0.00 0.00 0.00 4.52
280 281 2.985896 TGTACAGTAGCATTCTTGGCC 58.014 47.619 0.00 0.00 0.00 5.36
281 282 2.289565 GTACAGTAGCATTCTTGGCCC 58.710 52.381 0.00 0.00 0.00 5.80
282 283 0.698238 ACAGTAGCATTCTTGGCCCA 59.302 50.000 0.00 0.00 0.00 5.36
283 284 1.098050 CAGTAGCATTCTTGGCCCAC 58.902 55.000 0.00 0.00 0.00 4.61
284 285 0.034089 AGTAGCATTCTTGGCCCACC 60.034 55.000 0.00 0.00 0.00 4.61
285 286 1.037579 GTAGCATTCTTGGCCCACCC 61.038 60.000 0.00 0.00 33.59 4.61
286 287 1.214305 TAGCATTCTTGGCCCACCCT 61.214 55.000 0.00 0.00 33.59 4.34
287 288 2.353610 GCATTCTTGGCCCACCCTG 61.354 63.158 0.00 0.00 33.59 4.45
288 289 1.683365 CATTCTTGGCCCACCCTGG 60.683 63.158 0.00 0.00 37.25 4.45
289 290 2.169810 ATTCTTGGCCCACCCTGGT 61.170 57.895 0.00 0.00 35.17 4.00
290 291 1.739608 ATTCTTGGCCCACCCTGGTT 61.740 55.000 0.00 0.00 35.17 3.67
291 292 2.283173 CTTGGCCCACCCTGGTTC 60.283 66.667 0.00 0.00 35.17 3.62
292 293 3.106609 TTGGCCCACCCTGGTTCA 61.107 61.111 0.00 0.00 35.17 3.18
293 294 3.145473 TTGGCCCACCCTGGTTCAG 62.145 63.158 0.00 0.00 35.17 3.02
294 295 3.580319 GGCCCACCCTGGTTCAGT 61.580 66.667 0.00 0.00 35.17 3.41
295 296 2.034221 GCCCACCCTGGTTCAGTC 59.966 66.667 0.00 0.00 35.17 3.51
296 297 2.347490 CCCACCCTGGTTCAGTCG 59.653 66.667 0.00 0.00 35.17 4.18
297 298 2.358737 CCACCCTGGTTCAGTCGC 60.359 66.667 0.00 0.00 31.35 5.19
298 299 2.358737 CACCCTGGTTCAGTCGCC 60.359 66.667 0.00 0.00 0.00 5.54
299 300 2.526873 ACCCTGGTTCAGTCGCCT 60.527 61.111 0.00 0.00 0.00 5.52
300 301 1.229082 ACCCTGGTTCAGTCGCCTA 60.229 57.895 0.00 0.00 0.00 3.93
301 302 1.258445 ACCCTGGTTCAGTCGCCTAG 61.258 60.000 0.00 0.00 0.00 3.02
302 303 1.153549 CCTGGTTCAGTCGCCTAGC 60.154 63.158 0.00 0.00 0.00 3.42
303 304 1.608717 CCTGGTTCAGTCGCCTAGCT 61.609 60.000 0.00 0.00 0.00 3.32
304 305 0.179124 CTGGTTCAGTCGCCTAGCTC 60.179 60.000 0.00 0.00 0.00 4.09
305 306 1.142097 GGTTCAGTCGCCTAGCTCC 59.858 63.158 0.00 0.00 0.00 4.70
306 307 1.226717 GTTCAGTCGCCTAGCTCCG 60.227 63.158 0.00 0.00 0.00 4.63
307 308 3.064987 TTCAGTCGCCTAGCTCCGC 62.065 63.158 0.00 0.00 0.00 5.54
308 309 4.577246 CAGTCGCCTAGCTCCGCC 62.577 72.222 0.00 0.00 0.00 6.13
310 311 4.874977 GTCGCCTAGCTCCGCCAC 62.875 72.222 0.00 0.00 0.00 5.01
312 313 4.880537 CGCCTAGCTCCGCCACTG 62.881 72.222 0.00 0.00 0.00 3.66
313 314 4.537433 GCCTAGCTCCGCCACTGG 62.537 72.222 0.00 0.00 0.00 4.00
314 315 3.077556 CCTAGCTCCGCCACTGGT 61.078 66.667 0.00 0.00 0.00 4.00
315 316 2.496817 CTAGCTCCGCCACTGGTC 59.503 66.667 0.00 0.00 0.00 4.02
316 317 3.417275 CTAGCTCCGCCACTGGTCG 62.417 68.421 0.00 1.13 0.00 4.79
360 361 3.746045 TCTCCGTCCTATTTATGGTGC 57.254 47.619 0.00 0.00 0.00 5.01
865 866 2.188524 CTGTCACACGCTATGCTAGTG 58.811 52.381 0.00 0.00 41.90 2.74
866 867 0.924090 GTCACACGCTATGCTAGTGC 59.076 55.000 0.00 0.00 39.86 4.40
868 869 2.021457 TCACACGCTATGCTAGTGCTA 58.979 47.619 0.00 0.00 39.86 3.49
870 871 3.818773 TCACACGCTATGCTAGTGCTATA 59.181 43.478 0.00 0.00 39.86 1.31
871 872 3.914966 CACACGCTATGCTAGTGCTATAC 59.085 47.826 0.00 0.00 39.86 1.47
873 874 4.162072 CACGCTATGCTAGTGCTATACTG 58.838 47.826 0.00 0.00 40.65 2.74
874 875 3.175152 CGCTATGCTAGTGCTATACTGC 58.825 50.000 0.00 0.00 40.65 4.40
876 877 4.095036 CGCTATGCTAGTGCTATACTGCTA 59.905 45.833 0.00 0.00 40.65 3.49
877 878 5.336744 GCTATGCTAGTGCTATACTGCTAC 58.663 45.833 0.00 0.00 40.65 3.58
878 879 5.124776 GCTATGCTAGTGCTATACTGCTACT 59.875 44.000 0.00 0.00 40.65 2.57
879 880 6.349777 GCTATGCTAGTGCTATACTGCTACTT 60.350 42.308 0.00 0.00 40.65 2.24
880 881 5.440234 TGCTAGTGCTATACTGCTACTTC 57.560 43.478 0.00 0.00 40.65 3.01
881 882 4.278669 TGCTAGTGCTATACTGCTACTTCC 59.721 45.833 0.00 0.00 40.65 3.46
883 884 4.927978 AGTGCTATACTGCTACTTCCAG 57.072 45.455 0.00 0.00 38.49 3.86
885 886 3.068873 GTGCTATACTGCTACTTCCAGCT 59.931 47.826 0.00 0.00 42.30 4.24
886 887 3.068732 TGCTATACTGCTACTTCCAGCTG 59.931 47.826 6.78 6.78 43.78 4.24
888 889 1.195115 TACTGCTACTTCCAGCTGGG 58.805 55.000 32.23 19.57 42.82 4.45
889 890 1.451028 CTGCTACTTCCAGCTGGGC 60.451 63.158 32.23 25.67 42.30 5.36
890 891 2.124529 GCTACTTCCAGCTGGGCC 60.125 66.667 32.23 10.66 38.57 5.80
891 892 2.592308 CTACTTCCAGCTGGGCCC 59.408 66.667 32.23 17.59 36.21 5.80
892 893 2.204074 TACTTCCAGCTGGGCCCA 60.204 61.111 32.23 26.67 36.21 5.36
893 894 1.850289 TACTTCCAGCTGGGCCCAA 60.850 57.895 32.23 17.85 36.21 4.12
894 895 1.431195 TACTTCCAGCTGGGCCCAAA 61.431 55.000 32.23 16.06 36.21 3.28
895 896 1.980772 CTTCCAGCTGGGCCCAAAG 60.981 63.158 32.23 21.76 36.21 2.77
896 897 4.684134 TCCAGCTGGGCCCAAAGC 62.684 66.667 32.23 26.47 42.60 3.51
905 906 3.661648 GCCCAAAGCCCCAGGAGA 61.662 66.667 0.00 0.00 34.35 3.71
906 907 3.001358 GCCCAAAGCCCCAGGAGAT 62.001 63.158 0.00 0.00 34.35 2.75
907 908 1.228510 CCCAAAGCCCCAGGAGATC 59.771 63.158 0.00 0.00 0.00 2.75
908 909 1.574526 CCCAAAGCCCCAGGAGATCA 61.575 60.000 0.00 0.00 0.00 2.92
909 910 0.394899 CCAAAGCCCCAGGAGATCAC 60.395 60.000 0.00 0.00 0.00 3.06
910 911 0.329261 CAAAGCCCCAGGAGATCACA 59.671 55.000 0.00 0.00 0.00 3.58
911 912 0.622665 AAAGCCCCAGGAGATCACAG 59.377 55.000 0.00 0.00 0.00 3.66
912 913 0.252881 AAGCCCCAGGAGATCACAGA 60.253 55.000 0.00 0.00 0.00 3.41
913 914 0.980231 AGCCCCAGGAGATCACAGAC 60.980 60.000 0.00 0.00 0.00 3.51
914 915 1.977293 GCCCCAGGAGATCACAGACC 61.977 65.000 0.00 0.00 0.00 3.85
915 916 1.341156 CCCCAGGAGATCACAGACCC 61.341 65.000 0.00 0.00 0.00 4.46
916 917 0.618680 CCCAGGAGATCACAGACCCA 60.619 60.000 0.00 0.00 0.00 4.51
917 918 1.504912 CCAGGAGATCACAGACCCAT 58.495 55.000 0.00 0.00 0.00 4.00
918 919 1.415659 CCAGGAGATCACAGACCCATC 59.584 57.143 0.00 0.00 0.00 3.51
919 920 1.068281 CAGGAGATCACAGACCCATCG 59.932 57.143 0.00 0.00 0.00 3.84
920 921 0.249657 GGAGATCACAGACCCATCGC 60.250 60.000 0.00 0.00 0.00 4.58
921 922 0.249657 GAGATCACAGACCCATCGCC 60.250 60.000 0.00 0.00 0.00 5.54
922 923 0.977627 AGATCACAGACCCATCGCCA 60.978 55.000 0.00 0.00 0.00 5.69
923 924 0.811616 GATCACAGACCCATCGCCAC 60.812 60.000 0.00 0.00 0.00 5.01
924 925 2.257409 ATCACAGACCCATCGCCACC 62.257 60.000 0.00 0.00 0.00 4.61
925 926 2.607750 ACAGACCCATCGCCACCT 60.608 61.111 0.00 0.00 0.00 4.00
926 927 2.124983 CAGACCCATCGCCACCTG 60.125 66.667 0.00 0.00 0.00 4.00
927 928 2.284625 AGACCCATCGCCACCTGA 60.285 61.111 0.00 0.00 0.00 3.86
928 929 1.918293 AGACCCATCGCCACCTGAA 60.918 57.895 0.00 0.00 0.00 3.02
929 930 1.745489 GACCCATCGCCACCTGAAC 60.745 63.158 0.00 0.00 0.00 3.18
930 931 2.438434 CCCATCGCCACCTGAACC 60.438 66.667 0.00 0.00 0.00 3.62
931 932 2.819595 CCATCGCCACCTGAACCG 60.820 66.667 0.00 0.00 0.00 4.44
932 933 2.047274 CATCGCCACCTGAACCGT 60.047 61.111 0.00 0.00 0.00 4.83
933 934 2.047274 ATCGCCACCTGAACCGTG 60.047 61.111 0.00 0.00 0.00 4.94
959 960 2.954868 GCGTACGCCTCACATCCG 60.955 66.667 29.51 0.00 34.56 4.18
960 961 2.795973 CGTACGCCTCACATCCGA 59.204 61.111 0.52 0.00 0.00 4.55
961 962 1.138036 CGTACGCCTCACATCCGAA 59.862 57.895 0.52 0.00 0.00 4.30
962 963 0.866061 CGTACGCCTCACATCCGAAG 60.866 60.000 0.52 0.00 0.00 3.79
963 964 1.141019 TACGCCTCACATCCGAAGC 59.859 57.895 0.00 0.00 0.00 3.86
964 965 2.292794 TACGCCTCACATCCGAAGCC 62.293 60.000 0.00 0.00 0.00 4.35
965 966 2.586792 GCCTCACATCCGAAGCCT 59.413 61.111 0.00 0.00 0.00 4.58
966 967 1.823295 GCCTCACATCCGAAGCCTA 59.177 57.895 0.00 0.00 0.00 3.93
967 968 0.394565 GCCTCACATCCGAAGCCTAT 59.605 55.000 0.00 0.00 0.00 2.57
968 969 1.618837 GCCTCACATCCGAAGCCTATA 59.381 52.381 0.00 0.00 0.00 1.31
969 970 2.234908 GCCTCACATCCGAAGCCTATAT 59.765 50.000 0.00 0.00 0.00 0.86
970 971 3.447586 GCCTCACATCCGAAGCCTATATA 59.552 47.826 0.00 0.00 0.00 0.86
971 972 4.081642 GCCTCACATCCGAAGCCTATATAA 60.082 45.833 0.00 0.00 0.00 0.98
972 973 5.655488 CCTCACATCCGAAGCCTATATAAG 58.345 45.833 0.00 0.00 0.00 1.73
973 974 5.073311 TCACATCCGAAGCCTATATAAGC 57.927 43.478 0.00 0.00 0.00 3.09
974 975 4.526650 TCACATCCGAAGCCTATATAAGCA 59.473 41.667 6.12 0.00 0.00 3.91
975 976 4.867047 CACATCCGAAGCCTATATAAGCAG 59.133 45.833 6.12 0.00 0.00 4.24
976 977 3.594603 TCCGAAGCCTATATAAGCAGC 57.405 47.619 6.12 0.00 0.00 5.25
977 978 2.233922 TCCGAAGCCTATATAAGCAGCC 59.766 50.000 6.12 0.00 0.00 4.85
978 979 2.028112 CCGAAGCCTATATAAGCAGCCA 60.028 50.000 6.12 0.00 0.00 4.75
979 980 2.996621 CGAAGCCTATATAAGCAGCCAC 59.003 50.000 6.12 0.00 0.00 5.01
980 981 3.306364 CGAAGCCTATATAAGCAGCCACT 60.306 47.826 6.12 0.00 0.00 4.00
981 982 4.646572 GAAGCCTATATAAGCAGCCACTT 58.353 43.478 6.12 0.00 0.00 3.16
982 983 4.278975 AGCCTATATAAGCAGCCACTTC 57.721 45.455 6.12 0.00 0.00 3.01
983 984 3.008485 AGCCTATATAAGCAGCCACTTCC 59.992 47.826 6.12 0.00 0.00 3.46
984 985 3.008485 GCCTATATAAGCAGCCACTTCCT 59.992 47.826 0.00 0.00 0.00 3.36
985 986 4.223032 GCCTATATAAGCAGCCACTTCCTA 59.777 45.833 0.00 0.00 0.00 2.94
986 987 5.280011 GCCTATATAAGCAGCCACTTCCTAA 60.280 44.000 0.00 0.00 0.00 2.69
987 988 6.402222 CCTATATAAGCAGCCACTTCCTAAG 58.598 44.000 0.00 0.00 0.00 2.18
988 989 2.403252 TAAGCAGCCACTTCCTAAGC 57.597 50.000 0.00 0.00 0.00 3.09
989 990 0.322906 AAGCAGCCACTTCCTAAGCC 60.323 55.000 0.00 0.00 0.00 4.35
990 991 1.750780 GCAGCCACTTCCTAAGCCC 60.751 63.158 0.00 0.00 0.00 5.19
991 992 1.077429 CAGCCACTTCCTAAGCCCC 60.077 63.158 0.00 0.00 0.00 5.80
992 993 2.275748 GCCACTTCCTAAGCCCCC 59.724 66.667 0.00 0.00 0.00 5.40
1009 1010 3.711782 CCCTCTCCCCTCCCCCTT 61.712 72.222 0.00 0.00 0.00 3.95
1010 1011 2.040359 CCTCTCCCCTCCCCCTTC 60.040 72.222 0.00 0.00 0.00 3.46
1011 1012 2.040359 CTCTCCCCTCCCCCTTCC 60.040 72.222 0.00 0.00 0.00 3.46
1012 1013 2.543637 TCTCCCCTCCCCCTTCCT 60.544 66.667 0.00 0.00 0.00 3.36
1013 1014 2.040359 CTCCCCTCCCCCTTCCTC 60.040 72.222 0.00 0.00 0.00 3.71
1014 1015 2.543637 TCCCCTCCCCCTTCCTCT 60.544 66.667 0.00 0.00 0.00 3.69
1015 1016 2.040359 CCCCTCCCCCTTCCTCTC 60.040 72.222 0.00 0.00 0.00 3.20
1016 1017 2.652113 CCCCTCCCCCTTCCTCTCT 61.652 68.421 0.00 0.00 0.00 3.10
1017 1018 1.383803 CCCTCCCCCTTCCTCTCTG 60.384 68.421 0.00 0.00 0.00 3.35
1018 1019 2.069430 CCTCCCCCTTCCTCTCTGC 61.069 68.421 0.00 0.00 0.00 4.26
1019 1020 2.041265 TCCCCCTTCCTCTCTGCC 59.959 66.667 0.00 0.00 0.00 4.85
1020 1021 3.093172 CCCCCTTCCTCTCTGCCC 61.093 72.222 0.00 0.00 0.00 5.36
1021 1022 3.093172 CCCCTTCCTCTCTGCCCC 61.093 72.222 0.00 0.00 0.00 5.80
1022 1023 3.093172 CCCTTCCTCTCTGCCCCC 61.093 72.222 0.00 0.00 0.00 5.40
1313 1566 2.816958 CGTCTGGCTGATTGCGCT 60.817 61.111 9.73 0.00 44.05 5.92
1317 1570 4.728110 TGGCTGATTGCGCTGGCT 62.728 61.111 9.73 0.00 44.05 4.75
1467 1721 1.396653 GTGCTTGGAATGGAGGGATG 58.603 55.000 0.00 0.00 0.00 3.51
1468 1722 0.396139 TGCTTGGAATGGAGGGATGC 60.396 55.000 0.00 0.00 0.00 3.91
1477 1731 2.372074 GGAGGGATGCCGTTGGGTA 61.372 63.158 0.00 0.00 34.97 3.69
1478 1732 1.146263 GAGGGATGCCGTTGGGTAG 59.854 63.158 0.00 0.00 34.97 3.18
1501 1755 2.024369 ACGGAATAGGGCCCTGATTTTT 60.024 45.455 35.81 18.66 0.00 1.94
1508 1762 0.108662 GGCCCTGATTTTTGCTTCGG 60.109 55.000 0.00 0.00 0.00 4.30
1549 1803 1.072173 TGTACGGCGATAGGTAGGCTA 59.928 52.381 16.62 0.00 0.00 3.93
1557 1811 3.429135 GCGATAGGTAGGCTATTAGGTGC 60.429 52.174 0.00 0.00 0.00 5.01
1604 1858 1.918262 ACAGGGGAGCATCAGAATTGA 59.082 47.619 0.00 0.00 36.25 2.57
1611 1865 5.114081 GGGAGCATCAGAATTGAAATTTGG 58.886 41.667 0.00 0.00 36.78 3.28
1617 1871 5.565455 TCAGAATTGAAATTTGGCCCTTT 57.435 34.783 0.00 0.00 0.00 3.11
1721 1981 9.415544 GATTTACTTTGTGCAAGAATTCTCATT 57.584 29.630 8.78 0.00 36.21 2.57
1739 1999 2.584835 TTGCTAGGTTCAGGCATGTT 57.415 45.000 0.00 0.00 35.84 2.71
1779 2039 6.542821 TCCTCCATGAAAAATCTGTTGTAGT 58.457 36.000 0.00 0.00 0.00 2.73
1780 2040 7.004086 TCCTCCATGAAAAATCTGTTGTAGTT 58.996 34.615 0.00 0.00 0.00 2.24
1896 2158 7.812191 GTGTGCAAAAGTCATAATTATTGGACA 59.188 33.333 14.02 14.02 43.55 4.02
1904 2166 9.745880 AAGTCATAATTATTGGACAGTACTACG 57.254 33.333 14.86 0.00 32.79 3.51
1929 2208 2.237751 CCGCGTGAATCCGTCATCC 61.238 63.158 4.92 0.00 38.90 3.51
1930 2209 1.518352 CGCGTGAATCCGTCATCCA 60.518 57.895 0.00 0.00 38.90 3.41
1931 2210 1.752501 CGCGTGAATCCGTCATCCAC 61.753 60.000 0.00 0.00 38.90 4.02
1985 2264 3.470888 CCAGGCCCAGGGTCGTAG 61.471 72.222 7.55 0.00 29.39 3.51
2023 2302 3.554731 GGACGAACGTTAAGATTCCCATC 59.445 47.826 0.00 0.00 0.00 3.51
2033 2312 7.827236 ACGTTAAGATTCCCATCTTTGTTCATA 59.173 33.333 2.88 0.00 46.07 2.15
2097 2376 9.927668 AGTTGTTTCCCATTATGAATTAGTTTG 57.072 29.630 0.00 0.00 0.00 2.93
2106 2385 8.783093 CCATTATGAATTAGTTTGCTCGGATTA 58.217 33.333 0.00 0.00 0.00 1.75
2125 2404 7.011950 TCGGATTAAATAGGTACAATGCTGTTG 59.988 37.037 0.00 1.59 36.96 3.33
2158 2437 5.667539 TGTTATATCTCTGCCATAGCCTC 57.332 43.478 0.00 0.00 38.69 4.70
2191 2470 7.534918 GCCTGCAATTCATTTTGTCAAATTAAC 59.465 33.333 0.00 0.00 29.41 2.01
2283 2562 8.908786 TTCTTCACCATCTTACATAATCCATC 57.091 34.615 0.00 0.00 0.00 3.51
2300 2579 6.686484 ATCCATCTGTGCCATACTGTATTA 57.314 37.500 0.00 0.00 0.00 0.98
2345 2624 1.708341 ACAAATGCCAGCCTTTGTCT 58.292 45.000 16.98 0.36 39.38 3.41
2347 2626 1.891150 CAAATGCCAGCCTTTGTCTCT 59.109 47.619 10.98 0.00 30.53 3.10
2400 2679 8.752254 GTTTTCCATTTTACTAAGTTGCAAGTC 58.248 33.333 7.36 0.00 0.00 3.01
2643 2923 2.202570 CGCCCTGTTACTCGGTCG 60.203 66.667 0.00 0.00 0.00 4.79
2852 3132 1.762370 TGCTGTTCTGAGTGAAGACCA 59.238 47.619 0.00 0.00 35.01 4.02
2853 3133 2.369860 TGCTGTTCTGAGTGAAGACCAT 59.630 45.455 0.00 0.00 35.01 3.55
2908 3188 1.338200 CCAAGCGCTCCAGAGTTACTT 60.338 52.381 12.06 0.00 0.00 2.24
2909 3189 1.996191 CAAGCGCTCCAGAGTTACTTC 59.004 52.381 12.06 0.00 0.00 3.01
2911 3191 0.802607 GCGCTCCAGAGTTACTTCCG 60.803 60.000 0.00 0.00 0.00 4.30
2916 3196 1.899814 TCCAGAGTTACTTCCGCACAT 59.100 47.619 0.00 0.00 0.00 3.21
2970 3251 4.270084 CGAAATGTTCGCAGTGGTATGTAT 59.730 41.667 0.00 0.00 46.97 2.29
3044 3329 9.683069 CATATTGTATTCCTAGTTTTGATTGGC 57.317 33.333 0.00 0.00 0.00 4.52
3085 3370 7.913821 GGTAAAAAGAACAGAAACGAAGAATGT 59.086 33.333 0.00 0.00 0.00 2.71
3092 3377 4.449068 ACAGAAACGAAGAATGTGCTAGTG 59.551 41.667 0.00 0.00 0.00 2.74
3106 3391 2.101415 TGCTAGTGAGGGTGATCAATCG 59.899 50.000 0.00 0.00 0.00 3.34
3142 3427 2.239654 CCCATCTCCACCAAAGAAGCTA 59.760 50.000 0.00 0.00 0.00 3.32
3157 3442 3.019003 GCTACAGAGCGGCAAGGGA 62.019 63.158 1.45 0.00 39.39 4.20
3158 3443 1.153549 CTACAGAGCGGCAAGGGAC 60.154 63.158 1.45 0.00 0.00 4.46
3164 3449 2.747855 GCGGCAAGGGACCTTCTG 60.748 66.667 0.00 3.32 33.42 3.02
3167 3452 0.745845 CGGCAAGGGACCTTCTGATG 60.746 60.000 0.00 0.00 33.42 3.07
3190 3475 6.103330 TGTAGTTTCAAAAAGGAAAAGCACC 58.897 36.000 0.00 0.00 38.41 5.01
3227 3512 2.826428 CTAAATTAGCTGCTCCGCTGA 58.174 47.619 4.91 0.00 41.12 4.26
3341 3626 2.938451 TCGAATGCCATTACAGAAGCTG 59.062 45.455 0.00 0.00 37.52 4.24
3345 3630 2.161855 TGCCATTACAGAAGCTGTTGG 58.838 47.619 11.95 11.95 42.59 3.77
3379 3673 0.538977 AGTCAGTTGCTGCAGCCATT 60.539 50.000 34.64 19.22 41.18 3.16
3503 3854 4.464069 ACTCCAGTCATTACAGAAGCTC 57.536 45.455 0.00 0.00 0.00 4.09
3557 3914 2.636830 CCCCAGTCATTACAGAAGCTG 58.363 52.381 0.00 0.00 37.52 4.24
3583 3940 2.038387 ACAGAACACACCAGGTCAAC 57.962 50.000 0.00 0.00 0.00 3.18
3589 3946 1.024271 CACACCAGGTCAACCAGTTG 58.976 55.000 4.09 4.09 41.71 3.16
3591 3948 1.152756 ACCAGGTCAACCAGTTGGC 60.153 57.895 10.47 8.60 43.94 4.52
3598 3955 2.116125 AACCAGTTGGCTGCTCCC 59.884 61.111 0.00 0.00 41.26 4.30
3613 3970 1.078988 TCCCGTCGTTACATTGCCC 60.079 57.895 0.00 0.00 0.00 5.36
3616 3973 1.366111 CCGTCGTTACATTGCCCAGG 61.366 60.000 0.00 0.00 0.00 4.45
3631 3989 2.485302 GCCCAGGCAACACTTTCAAAAT 60.485 45.455 3.12 0.00 41.49 1.82
3634 3992 4.749598 CCCAGGCAACACTTTCAAAATAAC 59.250 41.667 0.00 0.00 41.41 1.89
3636 3994 5.814705 CCAGGCAACACTTTCAAAATAACAA 59.185 36.000 0.00 0.00 41.41 2.83
3651 4009 9.897744 TCAAAATAACAATCAACAGAAGATCAC 57.102 29.630 0.00 0.00 0.00 3.06
3659 4017 7.335422 ACAATCAACAGAAGATCACCAAGATAC 59.665 37.037 0.00 0.00 37.00 2.24
3661 4019 4.762289 ACAGAAGATCACCAAGATACCC 57.238 45.455 0.00 0.00 37.00 3.69
3666 4024 1.490490 GATCACCAAGATACCCCTGCA 59.510 52.381 0.00 0.00 37.00 4.41
3712 4070 1.032114 GTGCTACTGGCCCAATGGTC 61.032 60.000 0.00 0.00 40.92 4.02
3739 4097 1.871080 AGCTAGAAATCGGGAATGCG 58.129 50.000 0.00 0.00 0.00 4.73
3780 4138 0.966179 TCGAGTGCTGCTTACAGGAA 59.034 50.000 0.00 0.00 46.73 3.36
3883 4241 5.483231 GGGTCCTGGTAAAGTTCTACTACTT 59.517 44.000 0.00 0.00 39.97 2.24
3909 4267 5.646360 TGGAACTAAAATAGCTACAGGCAAC 59.354 40.000 0.00 0.00 44.79 4.17
3950 4308 9.403583 TCACACCTAAATTAGAACTGTTCTTTT 57.596 29.630 26.33 21.93 41.14 2.27
3980 4338 2.489938 TTCGAGGCAGGCATAGTTTT 57.510 45.000 0.00 0.00 0.00 2.43
4327 4686 4.899502 TGAAAAGAAGGGTGCTCTTAGAG 58.100 43.478 4.63 4.63 32.77 2.43
4379 4740 8.704668 TCTTGTCTGCTGGTAGAAATATTATGA 58.295 33.333 0.00 0.00 0.00 2.15
4417 4778 5.665459 CTCAGATCAAAGTCGAATTACCCT 58.335 41.667 0.00 0.00 0.00 4.34
4421 4782 7.023575 CAGATCAAAGTCGAATTACCCTTTTG 58.976 38.462 0.00 0.00 0.00 2.44
4422 4783 5.116069 TCAAAGTCGAATTACCCTTTTGC 57.884 39.130 0.00 0.00 0.00 3.68
4486 4849 2.530460 TTGATGGGCAGCCAGTTAAT 57.470 45.000 15.19 0.00 0.00 1.40
4489 4852 0.630673 ATGGGCAGCCAGTTAATCCA 59.369 50.000 15.19 0.00 0.00 3.41
4513 4876 3.621214 CGGACACCATGGATGTTTCCTTA 60.621 47.826 21.47 0.00 43.07 2.69
4549 4913 6.808008 ATAGATATTGACCTGCATTTTCGG 57.192 37.500 0.00 0.00 0.00 4.30
4552 4916 0.958091 TTGACCTGCATTTTCGGGTG 59.042 50.000 0.00 0.00 45.35 4.61
4558 4922 1.079888 GCATTTTCGGGTGCTTGGG 60.080 57.895 0.00 0.00 38.30 4.12
4565 4929 1.830408 CGGGTGCTTGGGTGGAAAA 60.830 57.895 0.00 0.00 0.00 2.29
4571 4935 1.754226 TGCTTGGGTGGAAAAGTGTTC 59.246 47.619 0.00 0.00 0.00 3.18
4572 4936 1.068588 GCTTGGGTGGAAAAGTGTTCC 59.931 52.381 4.98 4.98 39.03 3.62
4608 4972 4.156455 TCAACTTCTGGAGCAAGTTCTT 57.844 40.909 0.00 0.00 41.25 2.52
4718 5156 2.403252 AAAGTATTGTCGAGGCAGGG 57.597 50.000 0.00 0.00 0.00 4.45
4719 5157 0.541863 AAGTATTGTCGAGGCAGGGG 59.458 55.000 0.00 0.00 0.00 4.79
4720 5158 0.617820 AGTATTGTCGAGGCAGGGGT 60.618 55.000 0.00 0.00 0.00 4.95
4721 5159 0.179081 GTATTGTCGAGGCAGGGGTC 60.179 60.000 0.00 0.00 0.00 4.46
4732 5173 0.967380 GCAGGGGTCCCAACTCATTG 60.967 60.000 10.98 0.00 38.92 2.82
4743 5184 3.187227 CCCAACTCATTGTCAGACTTTCG 59.813 47.826 1.31 0.00 33.60 3.46
4745 5186 3.045601 ACTCATTGTCAGACTTTCGGG 57.954 47.619 1.31 0.00 0.00 5.14
4750 5191 0.033504 TGTCAGACTTTCGGGCAGAC 59.966 55.000 1.31 0.00 39.56 3.51
4774 5215 0.035439 TCAATCTTGGGCCGAGGTTC 60.035 55.000 16.76 0.00 0.00 3.62
4794 5235 1.969103 GGTGACGATTGCAGAAAAGC 58.031 50.000 0.00 0.00 0.00 3.51
4795 5236 1.401539 GGTGACGATTGCAGAAAAGCC 60.402 52.381 0.00 0.00 0.00 4.35
4829 5270 0.322975 GCAGTCTGGGCTTTGAGAGA 59.677 55.000 1.14 0.00 0.00 3.10
4836 5277 4.215185 GTCTGGGCTTTGAGAGAAAGAAAG 59.785 45.833 0.00 0.00 0.00 2.62
4837 5278 4.103153 TCTGGGCTTTGAGAGAAAGAAAGA 59.897 41.667 0.00 0.00 0.00 2.52
4838 5279 4.792068 TGGGCTTTGAGAGAAAGAAAGAA 58.208 39.130 0.00 0.00 0.00 2.52
4839 5280 5.200483 TGGGCTTTGAGAGAAAGAAAGAAA 58.800 37.500 0.00 0.00 0.00 2.52
4849 5290 3.638627 AGAAAGAAAGAAAAGTGCTGGGG 59.361 43.478 0.00 0.00 0.00 4.96
4860 5301 2.439156 GCTGGGGGCACTGATGTC 60.439 66.667 0.00 0.00 41.35 3.06
4861 5302 2.124983 CTGGGGGCACTGATGTCG 60.125 66.667 0.00 0.00 0.00 4.35
4862 5303 3.687321 CTGGGGGCACTGATGTCGG 62.687 68.421 0.00 0.00 0.00 4.79
4863 5304 3.399181 GGGGGCACTGATGTCGGA 61.399 66.667 0.00 0.00 0.00 4.55
4864 5305 2.668632 GGGGCACTGATGTCGGAA 59.331 61.111 0.00 0.00 0.00 4.30
4865 5306 1.002624 GGGGCACTGATGTCGGAAA 60.003 57.895 0.00 0.00 0.00 3.13
4866 5307 0.608035 GGGGCACTGATGTCGGAAAA 60.608 55.000 0.00 0.00 0.00 2.29
4867 5308 1.243902 GGGCACTGATGTCGGAAAAA 58.756 50.000 0.00 0.00 0.00 1.94
4868 5309 1.068541 GGGCACTGATGTCGGAAAAAC 60.069 52.381 0.00 0.00 0.00 2.43
4869 5310 1.068541 GGCACTGATGTCGGAAAAACC 60.069 52.381 0.00 0.00 0.00 3.27
4870 5311 1.880027 GCACTGATGTCGGAAAAACCT 59.120 47.619 0.00 0.00 36.31 3.50
4871 5312 3.071479 GCACTGATGTCGGAAAAACCTA 58.929 45.455 0.00 0.00 36.31 3.08
4872 5313 3.689649 GCACTGATGTCGGAAAAACCTAT 59.310 43.478 0.00 0.00 36.31 2.57
4873 5314 4.156008 GCACTGATGTCGGAAAAACCTATT 59.844 41.667 0.00 0.00 36.31 1.73
4874 5315 5.335661 GCACTGATGTCGGAAAAACCTATTT 60.336 40.000 0.00 0.00 36.31 1.40
4875 5316 6.086222 CACTGATGTCGGAAAAACCTATTTG 58.914 40.000 0.00 0.00 36.31 2.32
4876 5317 6.001460 ACTGATGTCGGAAAAACCTATTTGA 58.999 36.000 0.00 0.00 36.31 2.69
4877 5318 6.072673 ACTGATGTCGGAAAAACCTATTTGAC 60.073 38.462 0.00 0.00 36.31 3.18
4878 5319 4.735662 TGTCGGAAAAACCTATTTGACG 57.264 40.909 0.00 0.00 36.31 4.35
4879 5320 3.058777 TGTCGGAAAAACCTATTTGACGC 60.059 43.478 0.00 0.00 36.31 5.19
4880 5321 3.187842 GTCGGAAAAACCTATTTGACGCT 59.812 43.478 0.00 0.00 36.31 5.07
4881 5322 3.434299 TCGGAAAAACCTATTTGACGCTC 59.566 43.478 0.00 0.00 36.31 5.03
4882 5323 3.187637 CGGAAAAACCTATTTGACGCTCA 59.812 43.478 0.00 0.00 36.31 4.26
4883 5324 4.473199 GGAAAAACCTATTTGACGCTCAC 58.527 43.478 0.00 0.00 35.41 3.51
4884 5325 4.215613 GGAAAAACCTATTTGACGCTCACT 59.784 41.667 0.00 0.00 35.41 3.41
4885 5326 4.749245 AAAACCTATTTGACGCTCACTG 57.251 40.909 0.00 0.00 0.00 3.66
4886 5327 3.678056 AACCTATTTGACGCTCACTGA 57.322 42.857 0.00 0.00 0.00 3.41
4887 5328 3.895232 ACCTATTTGACGCTCACTGAT 57.105 42.857 0.00 0.00 0.00 2.90
4888 5329 3.525537 ACCTATTTGACGCTCACTGATG 58.474 45.455 0.00 0.00 0.00 3.07
4889 5330 3.055819 ACCTATTTGACGCTCACTGATGT 60.056 43.478 0.00 0.00 0.00 3.06
4890 5331 3.553511 CCTATTTGACGCTCACTGATGTC 59.446 47.826 5.13 5.13 0.00 3.06
4891 5332 2.820059 TTTGACGCTCACTGATGTCT 57.180 45.000 11.03 0.00 32.64 3.41
4892 5333 2.070262 TTGACGCTCACTGATGTCTG 57.930 50.000 11.03 0.00 32.64 3.51
4893 5334 0.961753 TGACGCTCACTGATGTCTGT 59.038 50.000 11.03 0.00 32.64 3.41
4894 5335 1.336240 TGACGCTCACTGATGTCTGTG 60.336 52.381 12.23 12.23 44.10 3.66
4899 5340 2.996621 GCTCACTGATGTCTGTGGTAAC 59.003 50.000 16.62 4.42 43.30 2.50
4924 5365 3.160585 TGGAGTCCAGGCCTTGTG 58.839 61.111 8.12 0.00 0.00 3.33
4979 5421 1.819632 CCCATGTAACGCTGAGGCC 60.820 63.158 0.00 0.00 34.44 5.19
5131 5592 1.289109 ATTGACGACGAAACTGGGCG 61.289 55.000 0.00 0.00 0.00 6.13
5141 5602 3.876589 AACTGGGCGACGCGAACAT 62.877 57.895 15.93 0.00 0.00 2.71
5152 5614 2.542907 GCGAACATATGCCGGTGGG 61.543 63.158 16.52 0.00 0.00 4.61
5153 5615 1.891919 CGAACATATGCCGGTGGGG 60.892 63.158 1.90 0.00 39.58 4.96
5154 5616 1.528309 GAACATATGCCGGTGGGGG 60.528 63.158 1.90 0.00 35.78 5.40
5214 5682 3.817647 GCATGGAGAGAGTCAAGTTTTGT 59.182 43.478 0.00 0.00 0.00 2.83
5215 5683 4.997395 GCATGGAGAGAGTCAAGTTTTGTA 59.003 41.667 0.00 0.00 0.00 2.41
5216 5684 5.106908 GCATGGAGAGAGTCAAGTTTTGTAC 60.107 44.000 0.00 0.00 0.00 2.90
5222 5690 8.238631 GGAGAGAGTCAAGTTTTGTACTAGTAG 58.761 40.741 1.87 0.00 35.54 2.57
5262 5760 8.908903 TGGTTCTCAGTAAATTGTGTTTTGTAT 58.091 29.630 0.00 0.00 0.00 2.29
5381 5885 3.502211 TCTCGCTTTTCATCTTTTGGGAC 59.498 43.478 0.00 0.00 0.00 4.46
5382 5886 3.218453 TCGCTTTTCATCTTTTGGGACA 58.782 40.909 0.00 0.00 0.00 4.02
5383 5887 3.253188 TCGCTTTTCATCTTTTGGGACAG 59.747 43.478 0.00 0.00 42.39 3.51
5384 5888 3.253188 CGCTTTTCATCTTTTGGGACAGA 59.747 43.478 0.00 0.00 42.39 3.41
5385 5889 4.082571 CGCTTTTCATCTTTTGGGACAGAT 60.083 41.667 0.00 0.00 42.39 2.90
5386 5890 5.565439 CGCTTTTCATCTTTTGGGACAGATT 60.565 40.000 0.00 0.00 42.39 2.40
5387 5891 5.636543 GCTTTTCATCTTTTGGGACAGATTG 59.363 40.000 0.00 0.00 42.39 2.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 7.496591 CCTACGGTAATTATTTGGCTTTACTCA 59.503 37.037 0.00 0.00 0.00 3.41
53 54 6.228616 TCTTCCGACACATTCCATATACAA 57.771 37.500 0.00 0.00 0.00 2.41
69 70 2.673893 CGTGGAATGTGTGATCTTCCGA 60.674 50.000 6.28 0.00 41.12 4.55
71 72 2.009774 CCGTGGAATGTGTGATCTTCC 58.990 52.381 4.16 4.16 39.13 3.46
87 88 1.885850 GGGGTGCGCTATTACCGTG 60.886 63.158 9.73 0.00 37.85 4.94
143 144 1.174783 CTACCTCTACCACTGCGTGT 58.825 55.000 7.68 0.00 0.00 4.49
147 148 1.342175 ACCCTCTACCTCTACCACTGC 60.342 57.143 0.00 0.00 0.00 4.40
148 149 2.379972 CACCCTCTACCTCTACCACTG 58.620 57.143 0.00 0.00 0.00 3.66
149 150 1.288335 CCACCCTCTACCTCTACCACT 59.712 57.143 0.00 0.00 0.00 4.00
150 151 1.006878 ACCACCCTCTACCTCTACCAC 59.993 57.143 0.00 0.00 0.00 4.16
151 152 1.287146 GACCACCCTCTACCTCTACCA 59.713 57.143 0.00 0.00 0.00 3.25
152 153 1.287146 TGACCACCCTCTACCTCTACC 59.713 57.143 0.00 0.00 0.00 3.18
153 154 2.657143 CTGACCACCCTCTACCTCTAC 58.343 57.143 0.00 0.00 0.00 2.59
154 155 1.569548 CCTGACCACCCTCTACCTCTA 59.430 57.143 0.00 0.00 0.00 2.43
155 156 0.336737 CCTGACCACCCTCTACCTCT 59.663 60.000 0.00 0.00 0.00 3.69
156 157 0.688087 CCCTGACCACCCTCTACCTC 60.688 65.000 0.00 0.00 0.00 3.85
157 158 1.392534 CCCTGACCACCCTCTACCT 59.607 63.158 0.00 0.00 0.00 3.08
158 159 1.080538 ACCCTGACCACCCTCTACC 59.919 63.158 0.00 0.00 0.00 3.18
159 160 1.265454 CCACCCTGACCACCCTCTAC 61.265 65.000 0.00 0.00 0.00 2.59
160 161 1.080354 CCACCCTGACCACCCTCTA 59.920 63.158 0.00 0.00 0.00 2.43
161 162 2.203998 CCACCCTGACCACCCTCT 60.204 66.667 0.00 0.00 0.00 3.69
162 163 3.330720 CCCACCCTGACCACCCTC 61.331 72.222 0.00 0.00 0.00 4.30
166 167 3.661648 ATGGCCCACCCTGACCAC 61.662 66.667 0.00 0.00 34.36 4.16
167 168 3.660571 CATGGCCCACCCTGACCA 61.661 66.667 0.00 0.00 33.64 4.02
168 169 4.447342 CCATGGCCCACCCTGACC 62.447 72.222 0.00 0.00 33.64 4.02
179 180 4.828296 CTCAGGGTGGGCCATGGC 62.828 72.222 29.47 29.47 45.85 4.40
180 181 1.941403 AATCTCAGGGTGGGCCATGG 61.941 60.000 10.70 7.63 45.85 3.66
182 183 0.032813 CAAATCTCAGGGTGGGCCAT 60.033 55.000 10.70 0.00 36.17 4.40
183 184 1.383799 CAAATCTCAGGGTGGGCCA 59.616 57.895 0.00 0.00 36.17 5.36
184 185 1.380380 CCAAATCTCAGGGTGGGCC 60.380 63.158 0.00 0.00 0.00 5.80
185 186 0.039618 TTCCAAATCTCAGGGTGGGC 59.960 55.000 0.00 0.00 0.00 5.36
186 187 2.603075 TTTCCAAATCTCAGGGTGGG 57.397 50.000 0.00 0.00 0.00 4.61
187 188 4.210331 CCTATTTCCAAATCTCAGGGTGG 58.790 47.826 0.00 0.00 0.00 4.61
188 189 4.860022 ACCTATTTCCAAATCTCAGGGTG 58.140 43.478 4.92 0.00 29.71 4.61
189 190 5.536497 AACCTATTTCCAAATCTCAGGGT 57.464 39.130 4.92 0.00 29.71 4.34
190 191 6.857437 AAAACCTATTTCCAAATCTCAGGG 57.143 37.500 4.92 0.00 29.71 4.45
245 246 9.173021 TGCTACTGTACAAATAATACATTGCTT 57.827 29.630 0.00 0.00 32.24 3.91
246 247 8.731275 TGCTACTGTACAAATAATACATTGCT 57.269 30.769 0.00 0.00 32.24 3.91
247 248 9.950680 AATGCTACTGTACAAATAATACATTGC 57.049 29.630 0.00 0.00 32.24 3.56
253 254 8.836413 GCCAAGAATGCTACTGTACAAATAATA 58.164 33.333 0.00 0.00 0.00 0.98
254 255 7.201821 GGCCAAGAATGCTACTGTACAAATAAT 60.202 37.037 0.00 0.00 0.00 1.28
255 256 6.094881 GGCCAAGAATGCTACTGTACAAATAA 59.905 38.462 0.00 0.00 0.00 1.40
256 257 5.588648 GGCCAAGAATGCTACTGTACAAATA 59.411 40.000 0.00 0.00 0.00 1.40
257 258 4.399303 GGCCAAGAATGCTACTGTACAAAT 59.601 41.667 0.00 0.00 0.00 2.32
258 259 3.756434 GGCCAAGAATGCTACTGTACAAA 59.244 43.478 0.00 0.00 0.00 2.83
259 260 3.343617 GGCCAAGAATGCTACTGTACAA 58.656 45.455 0.00 0.00 0.00 2.41
260 261 2.355716 GGGCCAAGAATGCTACTGTACA 60.356 50.000 4.39 0.00 0.00 2.90
261 262 2.289565 GGGCCAAGAATGCTACTGTAC 58.710 52.381 4.39 0.00 0.00 2.90
262 263 1.912731 TGGGCCAAGAATGCTACTGTA 59.087 47.619 2.13 0.00 0.00 2.74
263 264 0.698238 TGGGCCAAGAATGCTACTGT 59.302 50.000 2.13 0.00 0.00 3.55
264 265 1.098050 GTGGGCCAAGAATGCTACTG 58.902 55.000 8.40 0.00 0.00 2.74
265 266 0.034089 GGTGGGCCAAGAATGCTACT 60.034 55.000 8.40 0.00 34.09 2.57
266 267 1.037579 GGGTGGGCCAAGAATGCTAC 61.038 60.000 8.40 0.00 36.17 3.58
267 268 1.214305 AGGGTGGGCCAAGAATGCTA 61.214 55.000 8.40 0.00 36.17 3.49
268 269 2.037847 GGGTGGGCCAAGAATGCT 59.962 61.111 8.40 0.00 36.17 3.79
269 270 2.037847 AGGGTGGGCCAAGAATGC 59.962 61.111 8.40 0.00 36.17 3.56
270 271 1.683365 CCAGGGTGGGCCAAGAATG 60.683 63.158 8.40 4.95 36.17 2.67
271 272 1.739608 AACCAGGGTGGGCCAAGAAT 61.740 55.000 8.40 0.00 43.37 2.40
272 273 2.366153 GAACCAGGGTGGGCCAAGAA 62.366 60.000 8.40 0.00 43.37 2.52
273 274 2.780924 AACCAGGGTGGGCCAAGA 60.781 61.111 8.40 0.00 43.37 3.02
274 275 2.283173 GAACCAGGGTGGGCCAAG 60.283 66.667 8.40 0.00 43.37 3.61
275 276 3.106609 TGAACCAGGGTGGGCCAA 61.107 61.111 8.40 0.00 43.37 4.52
276 277 3.579302 CTGAACCAGGGTGGGCCA 61.579 66.667 0.00 0.00 43.37 5.36
277 278 3.569200 GACTGAACCAGGGTGGGCC 62.569 68.421 0.00 0.00 43.37 5.80
278 279 2.034221 GACTGAACCAGGGTGGGC 59.966 66.667 0.00 0.00 43.37 5.36
279 280 2.347490 CGACTGAACCAGGGTGGG 59.653 66.667 0.00 0.00 43.37 4.61
280 281 2.358737 GCGACTGAACCAGGGTGG 60.359 66.667 0.00 0.00 45.02 4.61
281 282 1.541310 TAGGCGACTGAACCAGGGTG 61.541 60.000 0.00 0.00 43.88 4.61
282 283 1.229082 TAGGCGACTGAACCAGGGT 60.229 57.895 0.00 0.00 43.88 4.34
283 284 1.517832 CTAGGCGACTGAACCAGGG 59.482 63.158 0.00 0.00 43.88 4.45
284 285 1.153549 GCTAGGCGACTGAACCAGG 60.154 63.158 0.00 0.00 43.88 4.45
285 286 0.179124 GAGCTAGGCGACTGAACCAG 60.179 60.000 0.00 0.00 43.88 4.00
286 287 1.605058 GGAGCTAGGCGACTGAACCA 61.605 60.000 0.00 0.00 43.88 3.67
287 288 1.142097 GGAGCTAGGCGACTGAACC 59.858 63.158 0.00 0.00 43.88 3.62
288 289 1.226717 CGGAGCTAGGCGACTGAAC 60.227 63.158 0.00 0.00 43.88 3.18
289 290 3.197614 CGGAGCTAGGCGACTGAA 58.802 61.111 0.00 0.00 43.88 3.02
308 309 1.733041 CTACCACGTGCGACCAGTG 60.733 63.158 10.91 0.00 35.79 3.66
309 310 1.900016 TCTACCACGTGCGACCAGT 60.900 57.895 10.91 3.93 0.00 4.00
310 311 1.443872 GTCTACCACGTGCGACCAG 60.444 63.158 10.91 0.00 0.00 4.00
311 312 2.646719 GTCTACCACGTGCGACCA 59.353 61.111 10.91 0.00 0.00 4.02
312 313 2.126189 GGTCTACCACGTGCGACC 60.126 66.667 24.35 24.35 39.14 4.79
313 314 2.646719 TGGTCTACCACGTGCGAC 59.353 61.111 10.91 15.05 42.01 5.19
360 361 2.082366 GGCATGCACTTTTGTCGCG 61.082 57.895 21.36 0.00 32.03 5.87
467 468 7.644986 TTTAACCTCGTTATGCAAATTTTGG 57.355 32.000 10.96 0.00 0.00 3.28
829 830 7.277098 GCGTGTGACAGTAATAGATCCTAAAAA 59.723 37.037 0.00 0.00 0.00 1.94
830 831 6.755141 GCGTGTGACAGTAATAGATCCTAAAA 59.245 38.462 0.00 0.00 0.00 1.52
831 832 6.096423 AGCGTGTGACAGTAATAGATCCTAAA 59.904 38.462 0.00 0.00 0.00 1.85
832 833 5.593095 AGCGTGTGACAGTAATAGATCCTAA 59.407 40.000 0.00 0.00 0.00 2.69
833 834 5.131067 AGCGTGTGACAGTAATAGATCCTA 58.869 41.667 0.00 0.00 0.00 2.94
834 835 3.954904 AGCGTGTGACAGTAATAGATCCT 59.045 43.478 0.00 0.00 0.00 3.24
835 836 4.308899 AGCGTGTGACAGTAATAGATCC 57.691 45.455 0.00 0.00 0.00 3.36
836 837 5.343593 GCATAGCGTGTGACAGTAATAGATC 59.656 44.000 0.00 0.00 0.00 2.75
837 838 5.010112 AGCATAGCGTGTGACAGTAATAGAT 59.990 40.000 0.00 0.00 0.00 1.98
838 839 4.338400 AGCATAGCGTGTGACAGTAATAGA 59.662 41.667 0.00 0.00 0.00 1.98
839 840 4.611943 AGCATAGCGTGTGACAGTAATAG 58.388 43.478 0.00 0.00 0.00 1.73
843 844 3.014623 ACTAGCATAGCGTGTGACAGTA 58.985 45.455 0.00 0.00 44.39 2.74
865 866 3.553922 CCAGCTGGAAGTAGCAGTATAGC 60.554 52.174 29.88 0.00 46.07 2.97
866 867 3.006323 CCCAGCTGGAAGTAGCAGTATAG 59.994 52.174 34.91 7.94 46.07 1.31
868 869 1.765314 CCCAGCTGGAAGTAGCAGTAT 59.235 52.381 34.91 0.00 46.07 2.12
870 871 1.986413 CCCAGCTGGAAGTAGCAGT 59.014 57.895 34.91 0.00 46.07 4.40
871 872 1.451028 GCCCAGCTGGAAGTAGCAG 60.451 63.158 34.91 15.45 46.07 4.24
873 874 2.124529 GGCCCAGCTGGAAGTAGC 60.125 66.667 34.91 26.21 44.01 3.58
874 875 1.852157 TTGGGCCCAGCTGGAAGTAG 61.852 60.000 34.91 17.77 37.39 2.57
876 877 2.720144 CTTTGGGCCCAGCTGGAAGT 62.720 60.000 34.91 0.00 37.39 3.01
877 878 1.980772 CTTTGGGCCCAGCTGGAAG 60.981 63.158 34.91 23.56 37.39 3.46
878 879 2.118076 CTTTGGGCCCAGCTGGAA 59.882 61.111 34.91 17.48 37.39 3.53
879 880 4.684134 GCTTTGGGCCCAGCTGGA 62.684 66.667 34.91 11.56 37.39 3.86
888 889 2.918300 GATCTCCTGGGGCTTTGGGC 62.918 65.000 0.00 0.00 40.90 5.36
889 890 1.228510 GATCTCCTGGGGCTTTGGG 59.771 63.158 0.00 0.00 0.00 4.12
890 891 0.394899 GTGATCTCCTGGGGCTTTGG 60.395 60.000 0.00 0.00 0.00 3.28
891 892 0.329261 TGTGATCTCCTGGGGCTTTG 59.671 55.000 0.00 0.00 0.00 2.77
892 893 0.622665 CTGTGATCTCCTGGGGCTTT 59.377 55.000 0.00 0.00 0.00 3.51
893 894 0.252881 TCTGTGATCTCCTGGGGCTT 60.253 55.000 0.00 0.00 0.00 4.35
894 895 0.980231 GTCTGTGATCTCCTGGGGCT 60.980 60.000 0.00 0.00 0.00 5.19
895 896 1.524482 GTCTGTGATCTCCTGGGGC 59.476 63.158 0.00 0.00 0.00 5.80
896 897 1.341156 GGGTCTGTGATCTCCTGGGG 61.341 65.000 0.00 0.00 0.00 4.96
897 898 0.618680 TGGGTCTGTGATCTCCTGGG 60.619 60.000 0.00 0.00 0.00 4.45
898 899 1.415659 GATGGGTCTGTGATCTCCTGG 59.584 57.143 0.00 0.00 0.00 4.45
899 900 1.068281 CGATGGGTCTGTGATCTCCTG 59.932 57.143 0.00 0.00 0.00 3.86
900 901 1.407936 CGATGGGTCTGTGATCTCCT 58.592 55.000 0.00 0.00 0.00 3.69
901 902 0.249657 GCGATGGGTCTGTGATCTCC 60.250 60.000 0.00 0.00 0.00 3.71
902 903 0.249657 GGCGATGGGTCTGTGATCTC 60.250 60.000 0.00 0.00 0.00 2.75
903 904 0.977627 TGGCGATGGGTCTGTGATCT 60.978 55.000 0.00 0.00 0.00 2.75
904 905 0.811616 GTGGCGATGGGTCTGTGATC 60.812 60.000 0.00 0.00 0.00 2.92
905 906 1.221840 GTGGCGATGGGTCTGTGAT 59.778 57.895 0.00 0.00 0.00 3.06
906 907 2.662596 GTGGCGATGGGTCTGTGA 59.337 61.111 0.00 0.00 0.00 3.58
907 908 2.436646 GGTGGCGATGGGTCTGTG 60.437 66.667 0.00 0.00 0.00 3.66
908 909 2.607750 AGGTGGCGATGGGTCTGT 60.608 61.111 0.00 0.00 0.00 3.41
909 910 2.124983 CAGGTGGCGATGGGTCTG 60.125 66.667 0.00 0.00 0.00 3.51
910 911 1.918293 TTCAGGTGGCGATGGGTCT 60.918 57.895 0.00 0.00 0.00 3.85
911 912 1.745489 GTTCAGGTGGCGATGGGTC 60.745 63.158 0.00 0.00 0.00 4.46
912 913 2.351276 GTTCAGGTGGCGATGGGT 59.649 61.111 0.00 0.00 0.00 4.51
913 914 2.438434 GGTTCAGGTGGCGATGGG 60.438 66.667 0.00 0.00 0.00 4.00
914 915 2.819595 CGGTTCAGGTGGCGATGG 60.820 66.667 0.00 0.00 0.00 3.51
915 916 2.047274 ACGGTTCAGGTGGCGATG 60.047 61.111 0.00 0.00 0.00 3.84
916 917 2.047274 CACGGTTCAGGTGGCGAT 60.047 61.111 0.00 0.00 0.00 4.58
942 943 2.877360 TTCGGATGTGAGGCGTACGC 62.877 60.000 31.54 31.54 40.16 4.42
943 944 0.866061 CTTCGGATGTGAGGCGTACG 60.866 60.000 11.84 11.84 41.66 3.67
944 945 1.146358 GCTTCGGATGTGAGGCGTAC 61.146 60.000 0.00 0.00 31.02 3.67
945 946 1.141019 GCTTCGGATGTGAGGCGTA 59.859 57.895 0.00 0.00 31.02 4.42
946 947 2.125512 GCTTCGGATGTGAGGCGT 60.126 61.111 0.00 0.00 31.02 5.68
947 948 2.016393 TAGGCTTCGGATGTGAGGCG 62.016 60.000 0.00 0.00 41.48 5.52
948 949 0.394565 ATAGGCTTCGGATGTGAGGC 59.605 55.000 0.00 0.00 39.99 4.70
949 950 5.655488 CTTATATAGGCTTCGGATGTGAGG 58.345 45.833 0.00 0.00 0.00 3.86
950 951 5.105752 GCTTATATAGGCTTCGGATGTGAG 58.894 45.833 9.48 0.00 0.00 3.51
951 952 4.526650 TGCTTATATAGGCTTCGGATGTGA 59.473 41.667 16.80 0.00 0.00 3.58
952 953 4.820897 TGCTTATATAGGCTTCGGATGTG 58.179 43.478 16.80 0.00 0.00 3.21
953 954 4.621747 GCTGCTTATATAGGCTTCGGATGT 60.622 45.833 16.80 0.00 0.00 3.06
954 955 3.868077 GCTGCTTATATAGGCTTCGGATG 59.132 47.826 16.80 1.93 0.00 3.51
955 956 3.118592 GGCTGCTTATATAGGCTTCGGAT 60.119 47.826 16.80 0.00 36.63 4.18
956 957 2.233922 GGCTGCTTATATAGGCTTCGGA 59.766 50.000 16.80 0.00 36.63 4.55
957 958 2.028112 TGGCTGCTTATATAGGCTTCGG 60.028 50.000 16.80 6.80 39.90 4.30
958 959 2.996621 GTGGCTGCTTATATAGGCTTCG 59.003 50.000 16.80 7.47 39.90 3.79
959 960 4.278975 AGTGGCTGCTTATATAGGCTTC 57.721 45.455 16.80 8.81 39.90 3.86
960 961 4.505742 GGAAGTGGCTGCTTATATAGGCTT 60.506 45.833 16.80 2.92 39.90 4.35
961 962 3.008485 GGAAGTGGCTGCTTATATAGGCT 59.992 47.826 16.80 0.00 39.90 4.58
962 963 3.008485 AGGAAGTGGCTGCTTATATAGGC 59.992 47.826 9.80 9.80 39.67 3.93
963 964 4.899352 AGGAAGTGGCTGCTTATATAGG 57.101 45.455 0.00 0.00 0.00 2.57
964 965 5.872070 GCTTAGGAAGTGGCTGCTTATATAG 59.128 44.000 0.00 0.00 0.00 1.31
965 966 5.280011 GGCTTAGGAAGTGGCTGCTTATATA 60.280 44.000 0.00 0.00 0.00 0.86
966 967 4.505742 GGCTTAGGAAGTGGCTGCTTATAT 60.506 45.833 0.00 0.00 0.00 0.86
967 968 3.181454 GGCTTAGGAAGTGGCTGCTTATA 60.181 47.826 0.00 0.00 0.00 0.98
968 969 2.422093 GGCTTAGGAAGTGGCTGCTTAT 60.422 50.000 0.00 0.00 0.00 1.73
969 970 1.065418 GGCTTAGGAAGTGGCTGCTTA 60.065 52.381 0.00 0.00 0.00 3.09
970 971 0.322906 GGCTTAGGAAGTGGCTGCTT 60.323 55.000 0.00 0.00 0.00 3.91
971 972 1.301293 GGCTTAGGAAGTGGCTGCT 59.699 57.895 0.00 0.00 0.00 4.24
972 973 1.750780 GGGCTTAGGAAGTGGCTGC 60.751 63.158 0.00 0.00 0.00 5.25
973 974 1.077429 GGGGCTTAGGAAGTGGCTG 60.077 63.158 0.00 0.00 0.00 4.85
974 975 2.309504 GGGGGCTTAGGAAGTGGCT 61.310 63.158 0.00 0.00 0.00 4.75
975 976 2.275748 GGGGGCTTAGGAAGTGGC 59.724 66.667 0.00 0.00 0.00 5.01
992 993 3.711782 AAGGGGGAGGGGAGAGGG 61.712 72.222 0.00 0.00 0.00 4.30
993 994 2.040359 GAAGGGGGAGGGGAGAGG 60.040 72.222 0.00 0.00 0.00 3.69
994 995 2.040359 GGAAGGGGGAGGGGAGAG 60.040 72.222 0.00 0.00 0.00 3.20
995 996 2.543637 AGGAAGGGGGAGGGGAGA 60.544 66.667 0.00 0.00 0.00 3.71
996 997 2.040359 GAGGAAGGGGGAGGGGAG 60.040 72.222 0.00 0.00 0.00 4.30
997 998 2.543637 AGAGGAAGGGGGAGGGGA 60.544 66.667 0.00 0.00 0.00 4.81
998 999 2.040359 GAGAGGAAGGGGGAGGGG 60.040 72.222 0.00 0.00 0.00 4.79
999 1000 1.383803 CAGAGAGGAAGGGGGAGGG 60.384 68.421 0.00 0.00 0.00 4.30
1000 1001 2.069430 GCAGAGAGGAAGGGGGAGG 61.069 68.421 0.00 0.00 0.00 4.30
1001 1002 2.069430 GGCAGAGAGGAAGGGGGAG 61.069 68.421 0.00 0.00 0.00 4.30
1002 1003 2.041265 GGCAGAGAGGAAGGGGGA 59.959 66.667 0.00 0.00 0.00 4.81
1003 1004 3.093172 GGGCAGAGAGGAAGGGGG 61.093 72.222 0.00 0.00 0.00 5.40
1004 1005 3.093172 GGGGCAGAGAGGAAGGGG 61.093 72.222 0.00 0.00 0.00 4.79
1005 1006 3.093172 GGGGGCAGAGAGGAAGGG 61.093 72.222 0.00 0.00 0.00 3.95
1032 1033 3.662642 TCCTCTCCCCTTTCCTGATTTTT 59.337 43.478 0.00 0.00 0.00 1.94
1033 1034 3.269034 TCCTCTCCCCTTTCCTGATTTT 58.731 45.455 0.00 0.00 0.00 1.82
1034 1035 2.934722 TCCTCTCCCCTTTCCTGATTT 58.065 47.619 0.00 0.00 0.00 2.17
1035 1036 2.668850 TCCTCTCCCCTTTCCTGATT 57.331 50.000 0.00 0.00 0.00 2.57
1036 1037 2.578480 GTTTCCTCTCCCCTTTCCTGAT 59.422 50.000 0.00 0.00 0.00 2.90
1037 1038 1.985895 GTTTCCTCTCCCCTTTCCTGA 59.014 52.381 0.00 0.00 0.00 3.86
1038 1039 1.004862 GGTTTCCTCTCCCCTTTCCTG 59.995 57.143 0.00 0.00 0.00 3.86
1039 1040 1.373536 GGTTTCCTCTCCCCTTTCCT 58.626 55.000 0.00 0.00 0.00 3.36
1040 1041 1.073098 TGGTTTCCTCTCCCCTTTCC 58.927 55.000 0.00 0.00 0.00 3.13
1041 1042 2.796557 CTTGGTTTCCTCTCCCCTTTC 58.203 52.381 0.00 0.00 0.00 2.62
1313 1566 2.199652 CCAAAGAACCGGCAAGCCA 61.200 57.895 12.19 0.00 35.37 4.75
1440 1694 1.250328 CATTCCAAGCACCAGAGCAA 58.750 50.000 0.00 0.00 36.85 3.91
1441 1695 0.609957 CCATTCCAAGCACCAGAGCA 60.610 55.000 0.00 0.00 36.85 4.26
1477 1731 0.263765 TCAGGGCCCTATTCCGTACT 59.736 55.000 28.13 0.00 0.00 2.73
1478 1732 1.349067 ATCAGGGCCCTATTCCGTAC 58.651 55.000 28.13 0.00 0.00 3.67
1487 1741 1.269958 GAAGCAAAAATCAGGGCCCT 58.730 50.000 22.28 22.28 0.00 5.19
1501 1755 4.722700 GGCAAGCCTCCCGAAGCA 62.723 66.667 3.29 0.00 0.00 3.91
1549 1803 4.026052 CCCCAATTCAAGAAGCACCTAAT 58.974 43.478 0.00 0.00 0.00 1.73
1604 1858 3.139957 ACCATTTCCAAAGGGCCAAATTT 59.860 39.130 6.18 0.00 43.32 1.82
1611 1865 2.247358 TCTGAACCATTTCCAAAGGGC 58.753 47.619 2.62 0.00 43.32 5.19
1617 1871 5.010922 CCAAGAAACATCTGAACCATTTCCA 59.989 40.000 0.00 0.00 31.05 3.53
1721 1981 1.350684 TGAACATGCCTGAACCTAGCA 59.649 47.619 0.00 0.00 41.50 3.49
1886 2148 4.404715 AGTGCCGTAGTACTGTCCAATAAT 59.595 41.667 5.39 0.00 37.57 1.28
1929 2208 5.834239 AGGTATAACAAGAAAACGACGTG 57.166 39.130 0.00 0.00 0.00 4.49
1930 2209 5.333568 GCAAGGTATAACAAGAAAACGACGT 60.334 40.000 0.00 0.00 0.00 4.34
1931 2210 5.077424 GCAAGGTATAACAAGAAAACGACG 58.923 41.667 0.00 0.00 0.00 5.12
1932 2211 5.992729 TGCAAGGTATAACAAGAAAACGAC 58.007 37.500 0.00 0.00 0.00 4.34
1933 2212 6.607689 CATGCAAGGTATAACAAGAAAACGA 58.392 36.000 0.00 0.00 0.00 3.85
1934 2213 5.286082 GCATGCAAGGTATAACAAGAAAACG 59.714 40.000 14.21 0.00 0.00 3.60
1935 2214 5.576774 GGCATGCAAGGTATAACAAGAAAAC 59.423 40.000 21.36 0.00 0.00 2.43
1936 2215 5.621104 CGGCATGCAAGGTATAACAAGAAAA 60.621 40.000 21.36 0.00 0.00 2.29
1937 2216 4.142491 CGGCATGCAAGGTATAACAAGAAA 60.142 41.667 21.36 0.00 0.00 2.52
2003 2282 4.467198 AGATGGGAATCTTAACGTTCGT 57.533 40.909 2.82 0.00 0.00 3.85
2008 2287 6.494893 TGAACAAAGATGGGAATCTTAACG 57.505 37.500 1.59 0.00 39.77 3.18
2023 2302 7.452880 TTTCAAGATCCCAGTATGAACAAAG 57.547 36.000 0.00 0.00 39.69 2.77
2033 2312 7.865820 TCTGATATCTTTTTCAAGATCCCAGT 58.134 34.615 17.23 0.00 45.26 4.00
2097 2376 5.701290 AGCATTGTACCTATTTAATCCGAGC 59.299 40.000 0.00 0.00 0.00 5.03
2106 2385 8.079809 GTGTAAACAACAGCATTGTACCTATTT 58.920 33.333 6.78 0.56 39.29 1.40
2125 2404 7.710907 TGGCAGAGATATAACATCAGTGTAAAC 59.289 37.037 0.00 0.00 37.67 2.01
2158 2437 1.033746 ATGAATTGCAGGCCGGTCAG 61.034 55.000 9.71 0.00 0.00 3.51
2248 2527 4.517285 AGATGGTGAAGAATTACACGCAT 58.483 39.130 0.00 0.00 37.82 4.73
2251 2530 6.961359 TGTAAGATGGTGAAGAATTACACG 57.039 37.500 0.00 0.00 37.82 4.49
2264 2543 6.000219 GCACAGATGGATTATGTAAGATGGT 59.000 40.000 0.00 0.00 0.00 3.55
2300 2579 6.772716 ACATATCGACTTGGCTTCCAATAAAT 59.227 34.615 0.00 0.00 43.07 1.40
2316 2595 3.058914 GGCTGGCATTTGTACATATCGAC 60.059 47.826 0.00 0.00 0.00 4.20
2400 2679 6.042144 ACAAAACCACACAAATTTTATGCG 57.958 33.333 0.00 0.00 0.00 4.73
2643 2923 2.029828 CGCAGGAGGTATACAGGTCATC 60.030 54.545 5.01 0.00 0.00 2.92
2852 3132 2.482142 GCAGGAGTACTTGCTCGCTTAT 60.482 50.000 11.53 0.00 44.06 1.73
2853 3133 1.135083 GCAGGAGTACTTGCTCGCTTA 60.135 52.381 11.53 0.00 44.06 3.09
2970 3251 4.595762 AACGAGTACACAAAGCCTCTAA 57.404 40.909 0.00 0.00 0.00 2.10
3052 3337 7.881232 TCGTTTCTGTTCTTTTTACCTGGATAT 59.119 33.333 0.00 0.00 0.00 1.63
3085 3370 2.101415 CGATTGATCACCCTCACTAGCA 59.899 50.000 0.00 0.00 0.00 3.49
3092 3377 1.417890 ACCATCCGATTGATCACCCTC 59.582 52.381 0.00 0.00 0.00 4.30
3142 3427 4.021925 GGTCCCTTGCCGCTCTGT 62.022 66.667 0.00 0.00 0.00 3.41
3148 3433 0.745845 CATCAGAAGGTCCCTTGCCG 60.746 60.000 2.65 0.00 36.26 5.69
3157 3442 7.060421 TCCTTTTTGAAACTACATCAGAAGGT 58.940 34.615 14.75 0.00 39.91 3.50
3158 3443 7.510549 TCCTTTTTGAAACTACATCAGAAGG 57.489 36.000 11.45 11.45 40.10 3.46
3164 3449 7.042725 GGTGCTTTTCCTTTTTGAAACTACATC 60.043 37.037 0.00 0.00 34.13 3.06
3167 3452 6.103330 TGGTGCTTTTCCTTTTTGAAACTAC 58.897 36.000 0.00 0.00 34.13 2.73
3227 3512 5.732331 TCAGTTCTTGGATTCCCCATAAT 57.268 39.130 0.00 0.00 46.10 1.28
3259 3544 1.065199 GGATCAACACTGGCAGGATCA 60.065 52.381 23.75 6.01 36.86 2.92
3341 3626 0.961019 TGATTGACTTGGCTGCCAAC 59.039 50.000 29.24 20.65 38.75 3.77
3345 3630 1.467734 CTGACTGATTGACTTGGCTGC 59.532 52.381 0.00 0.00 0.00 5.25
3379 3673 5.012664 TGTTCCACTGGAAATAGCTTCTGTA 59.987 40.000 12.33 0.00 43.86 2.74
3434 3728 1.893137 TCTGACAACAGCATCCGTAGT 59.107 47.619 0.00 0.00 43.17 2.73
3435 3729 2.534298 CTCTGACAACAGCATCCGTAG 58.466 52.381 0.00 0.00 43.17 3.51
3439 3790 2.479566 TTCCTCTGACAACAGCATCC 57.520 50.000 0.00 0.00 43.17 3.51
3503 3854 3.548770 TGATCTGCCTTCTATTGCCAAG 58.451 45.455 0.00 0.00 0.00 3.61
3557 3914 0.814457 TGGTGTGTTCTGTTGCCAAC 59.186 50.000 0.00 0.00 0.00 3.77
3568 3925 0.623723 ACTGGTTGACCTGGTGTGTT 59.376 50.000 2.82 0.00 39.04 3.32
3573 3930 1.152756 GCCAACTGGTTGACCTGGT 60.153 57.895 14.17 0.00 42.93 4.00
3583 3940 4.335647 ACGGGAGCAGCCAACTGG 62.336 66.667 0.00 0.00 44.63 4.00
3589 3946 2.508663 GTAACGACGGGAGCAGCC 60.509 66.667 0.00 0.00 0.00 4.85
3591 3948 0.999406 CAATGTAACGACGGGAGCAG 59.001 55.000 0.00 0.00 0.00 4.24
3598 3955 1.977594 GCCTGGGCAATGTAACGACG 61.978 60.000 6.75 0.00 41.49 5.12
3613 3970 6.900568 TTGTTATTTTGAAAGTGTTGCCTG 57.099 33.333 0.00 0.00 0.00 4.85
3616 3973 8.386606 TGTTGATTGTTATTTTGAAAGTGTTGC 58.613 29.630 0.00 0.00 0.00 4.17
3625 3982 9.897744 GTGATCTTCTGTTGATTGTTATTTTGA 57.102 29.630 0.00 0.00 0.00 2.69
3631 3989 7.223584 TCTTGGTGATCTTCTGTTGATTGTTA 58.776 34.615 0.00 0.00 0.00 2.41
3634 3992 6.754702 ATCTTGGTGATCTTCTGTTGATTG 57.245 37.500 0.00 0.00 0.00 2.67
3636 3994 6.352516 GGTATCTTGGTGATCTTCTGTTGAT 58.647 40.000 0.00 0.00 36.65 2.57
3647 4005 1.212935 GTGCAGGGGTATCTTGGTGAT 59.787 52.381 0.00 0.00 39.11 3.06
3649 4007 0.327924 TGTGCAGGGGTATCTTGGTG 59.672 55.000 0.00 0.00 0.00 4.17
3651 4009 0.327924 TGTGTGCAGGGGTATCTTGG 59.672 55.000 0.00 0.00 0.00 3.61
3659 4017 2.987547 CTGGCTTGTGTGCAGGGG 60.988 66.667 0.00 0.00 34.04 4.79
3661 4019 3.677648 GCCTGGCTTGTGTGCAGG 61.678 66.667 12.43 0.00 35.69 4.85
3687 4045 4.803908 GGCCAGTAGCACCAGCCC 62.804 72.222 0.00 0.00 46.50 5.19
3712 4070 2.864343 CCCGATTTCTAGCTTTGGTACG 59.136 50.000 0.00 0.00 0.00 3.67
3739 4097 2.996631 ACAGCATGGGAAGACTCATTC 58.003 47.619 0.00 0.00 43.62 2.67
3780 4138 1.815003 GCTGCTTGATTAACAGTGCCT 59.185 47.619 0.00 0.00 33.87 4.75
3842 4200 0.957395 CCCTTGATGTGAAGCTGCGT 60.957 55.000 0.00 0.00 0.00 5.24
3883 4241 6.242396 TGCCTGTAGCTATTTTAGTTCCAAA 58.758 36.000 0.00 0.00 44.23 3.28
3960 4318 2.487762 CAAAACTATGCCTGCCTCGAAA 59.512 45.455 0.00 0.00 0.00 3.46
3980 4338 0.677288 CAAGTACGGTCAGGTCACCA 59.323 55.000 0.00 0.00 36.01 4.17
4060 4418 3.782244 CAGAGCGCGCACCTTGTC 61.782 66.667 35.10 20.69 0.00 3.18
4273 4631 0.036671 CAGCTCAGCCACACAGATCA 60.037 55.000 0.00 0.00 0.00 2.92
4321 4680 9.363763 CAACACCATCTATATATGCACTCTAAG 57.636 37.037 0.00 0.00 0.00 2.18
4327 4686 7.442364 AGACAACAACACCATCTATATATGCAC 59.558 37.037 0.00 0.00 0.00 4.57
4379 4740 2.282745 GAGCCAAGCAAGCCACCT 60.283 61.111 0.00 0.00 0.00 4.00
4422 4783 0.958822 ACACCGCCTAAAGCAAAAGG 59.041 50.000 0.00 0.00 44.04 3.11
4486 4849 4.470764 TCCATGGTGTCCGATGGA 57.529 55.556 12.58 12.43 44.84 3.41
4489 4852 2.643551 GAAACATCCATGGTGTCCGAT 58.356 47.619 12.58 0.00 0.00 4.18
4549 4913 0.389025 CACTTTTCCACCCAAGCACC 59.611 55.000 0.00 0.00 0.00 5.01
4552 4916 1.068588 GGAACACTTTTCCACCCAAGC 59.931 52.381 0.00 0.00 38.45 4.01
4571 4935 3.079578 AGTTGATGCACACAGAAGATGG 58.920 45.455 0.00 0.00 0.00 3.51
4572 4936 4.454847 AGAAGTTGATGCACACAGAAGATG 59.545 41.667 0.00 0.00 0.00 2.90
4622 4986 8.871686 AAAACTTGTTGCTAATACCAAAGAAG 57.128 30.769 0.00 0.00 0.00 2.85
4623 4987 8.470805 TGAAAACTTGTTGCTAATACCAAAGAA 58.529 29.630 0.00 0.00 0.00 2.52
4633 5001 8.629158 AGTACATTCATGAAAACTTGTTGCTAA 58.371 29.630 13.09 0.00 0.00 3.09
4702 5140 0.179081 GACCCCTGCCTCGACAATAC 60.179 60.000 0.00 0.00 0.00 1.89
4704 5142 2.670148 GGACCCCTGCCTCGACAAT 61.670 63.158 0.00 0.00 0.00 2.71
4705 5143 3.319198 GGACCCCTGCCTCGACAA 61.319 66.667 0.00 0.00 0.00 3.18
4708 5146 4.649705 TTGGGACCCCTGCCTCGA 62.650 66.667 8.45 0.00 36.94 4.04
4714 5152 0.405585 ACAATGAGTTGGGACCCCTG 59.594 55.000 8.45 0.00 39.70 4.45
4718 5156 2.039084 AGTCTGACAATGAGTTGGGACC 59.961 50.000 10.88 0.00 39.70 4.46
4719 5157 3.409026 AGTCTGACAATGAGTTGGGAC 57.591 47.619 10.88 0.00 39.70 4.46
4720 5158 4.389374 GAAAGTCTGACAATGAGTTGGGA 58.611 43.478 10.88 0.00 39.70 4.37
4721 5159 3.187227 CGAAAGTCTGACAATGAGTTGGG 59.813 47.826 10.88 0.00 39.70 4.12
4732 5173 0.318762 AGTCTGCCCGAAAGTCTGAC 59.681 55.000 0.00 0.00 0.00 3.51
4743 5184 2.751806 CCAAGATTGAAAGAGTCTGCCC 59.248 50.000 0.00 0.00 0.00 5.36
4745 5186 2.163211 GCCCAAGATTGAAAGAGTCTGC 59.837 50.000 0.00 0.00 0.00 4.26
4750 5191 2.012673 CTCGGCCCAAGATTGAAAGAG 58.987 52.381 0.00 0.00 0.00 2.85
4774 5215 1.725931 GCTTTTCTGCAATCGTCACCG 60.726 52.381 0.00 0.00 0.00 4.94
4794 5235 4.038080 GCGGTGCAAACCTTCCGG 62.038 66.667 12.45 0.00 42.71 5.14
4795 5236 3.254014 CTGCGGTGCAAACCTTCCG 62.254 63.158 6.80 6.80 44.86 4.30
4808 5249 2.032528 TCAAAGCCCAGACTGCGG 59.967 61.111 0.00 1.20 0.00 5.69
4810 5251 0.322975 TCTCTCAAAGCCCAGACTGC 59.677 55.000 0.00 0.00 0.00 4.40
4811 5252 2.847327 TTCTCTCAAAGCCCAGACTG 57.153 50.000 0.00 0.00 0.00 3.51
4812 5253 2.975489 TCTTTCTCTCAAAGCCCAGACT 59.025 45.455 0.00 0.00 0.00 3.24
4829 5270 2.700371 CCCCCAGCACTTTTCTTTCTTT 59.300 45.455 0.00 0.00 0.00 2.52
4849 5290 1.068541 GGTTTTTCCGACATCAGTGCC 60.069 52.381 0.00 0.00 0.00 5.01
4860 5301 3.187637 TGAGCGTCAAATAGGTTTTTCCG 59.812 43.478 0.00 0.00 41.99 4.30
4861 5302 4.215613 AGTGAGCGTCAAATAGGTTTTTCC 59.784 41.667 0.00 0.00 0.00 3.13
4862 5303 5.049680 TCAGTGAGCGTCAAATAGGTTTTTC 60.050 40.000 0.00 0.00 0.00 2.29
4863 5304 4.819630 TCAGTGAGCGTCAAATAGGTTTTT 59.180 37.500 0.00 0.00 0.00 1.94
4864 5305 4.385825 TCAGTGAGCGTCAAATAGGTTTT 58.614 39.130 0.00 0.00 0.00 2.43
4865 5306 4.002906 TCAGTGAGCGTCAAATAGGTTT 57.997 40.909 0.00 0.00 0.00 3.27
4866 5307 3.678056 TCAGTGAGCGTCAAATAGGTT 57.322 42.857 0.00 0.00 0.00 3.50
4867 5308 3.055819 ACATCAGTGAGCGTCAAATAGGT 60.056 43.478 0.00 0.00 0.00 3.08
4868 5309 3.525537 ACATCAGTGAGCGTCAAATAGG 58.474 45.455 0.00 0.00 0.00 2.57
4869 5310 4.267214 CAGACATCAGTGAGCGTCAAATAG 59.733 45.833 21.36 7.44 0.00 1.73
4870 5311 4.176271 CAGACATCAGTGAGCGTCAAATA 58.824 43.478 21.36 0.00 0.00 1.40
4871 5312 2.998670 CAGACATCAGTGAGCGTCAAAT 59.001 45.455 21.36 4.72 0.00 2.32
4872 5313 2.224042 ACAGACATCAGTGAGCGTCAAA 60.224 45.455 21.36 0.00 0.00 2.69
4873 5314 1.341209 ACAGACATCAGTGAGCGTCAA 59.659 47.619 21.36 0.00 0.00 3.18
4874 5315 0.961753 ACAGACATCAGTGAGCGTCA 59.038 50.000 21.36 0.00 0.00 4.35
4875 5316 1.344458 CACAGACATCAGTGAGCGTC 58.656 55.000 14.72 14.72 35.69 5.19
4876 5317 0.037882 CCACAGACATCAGTGAGCGT 60.038 55.000 6.03 0.00 35.69 5.07
4877 5318 0.037882 ACCACAGACATCAGTGAGCG 60.038 55.000 6.03 0.00 35.69 5.03
4878 5319 2.996621 GTTACCACAGACATCAGTGAGC 59.003 50.000 6.03 0.00 35.69 4.26
4879 5320 3.259374 AGGTTACCACAGACATCAGTGAG 59.741 47.826 3.51 0.05 35.69 3.51
4880 5321 3.006859 CAGGTTACCACAGACATCAGTGA 59.993 47.826 3.51 0.00 35.69 3.41
4881 5322 3.329386 CAGGTTACCACAGACATCAGTG 58.671 50.000 3.51 0.00 33.78 3.66
4882 5323 2.303022 CCAGGTTACCACAGACATCAGT 59.697 50.000 3.51 0.00 0.00 3.41
4883 5324 2.936993 GCCAGGTTACCACAGACATCAG 60.937 54.545 3.51 0.00 0.00 2.90
4884 5325 1.003118 GCCAGGTTACCACAGACATCA 59.997 52.381 3.51 0.00 0.00 3.07
4885 5326 1.003118 TGCCAGGTTACCACAGACATC 59.997 52.381 3.51 0.00 0.00 3.06
4886 5327 1.064003 TGCCAGGTTACCACAGACAT 58.936 50.000 3.51 0.00 0.00 3.06
4887 5328 0.107831 GTGCCAGGTTACCACAGACA 59.892 55.000 3.51 0.00 0.00 3.41
4888 5329 0.396811 AGTGCCAGGTTACCACAGAC 59.603 55.000 3.51 0.00 32.09 3.51
4889 5330 0.396435 CAGTGCCAGGTTACCACAGA 59.604 55.000 3.51 0.00 32.09 3.41
4890 5331 0.606401 CCAGTGCCAGGTTACCACAG 60.606 60.000 3.51 0.00 32.09 3.66
4891 5332 1.057275 TCCAGTGCCAGGTTACCACA 61.057 55.000 3.51 0.00 32.09 4.17
4892 5333 0.321653 CTCCAGTGCCAGGTTACCAC 60.322 60.000 3.51 0.00 0.00 4.16
4893 5334 0.766674 ACTCCAGTGCCAGGTTACCA 60.767 55.000 3.51 0.00 0.00 3.25
4894 5335 0.036294 GACTCCAGTGCCAGGTTACC 60.036 60.000 0.00 0.00 0.00 2.85
4899 5340 2.667418 CTGGACTCCAGTGCCAGG 59.333 66.667 16.18 0.00 45.82 4.45
4979 5421 2.933287 TGGGCCCCACACCAGTAG 60.933 66.667 22.27 0.00 31.92 2.57
4998 5440 1.153901 TACGCTCCGCCTTTTCTCG 60.154 57.895 0.00 0.00 0.00 4.04
5117 5578 3.467119 CGTCGCCCAGTTTCGTCG 61.467 66.667 0.00 0.00 0.00 5.12
5131 5592 1.881252 ACCGGCATATGTTCGCGTC 60.881 57.895 5.77 1.06 0.00 5.19
5136 5597 1.528309 CCCCCACCGGCATATGTTC 60.528 63.158 0.00 0.00 0.00 3.18
5152 5614 1.001048 GTAAAAAGTTGCCACCGACCC 60.001 52.381 0.00 0.00 0.00 4.46
5153 5615 1.001048 GGTAAAAAGTTGCCACCGACC 60.001 52.381 0.00 0.00 39.22 4.79
5154 5616 1.001048 GGGTAAAAAGTTGCCACCGAC 60.001 52.381 0.00 0.00 41.09 4.79
5161 5623 3.199677 GTGTTTGGGGGTAAAAAGTTGC 58.800 45.455 0.00 0.00 0.00 4.17
5214 5682 5.202004 CAAAGAGGAGGAAGGCTACTAGTA 58.798 45.833 1.89 1.89 0.00 1.82
5215 5683 4.027437 CAAAGAGGAGGAAGGCTACTAGT 58.973 47.826 0.00 0.00 0.00 2.57
5216 5684 3.386402 CCAAAGAGGAGGAAGGCTACTAG 59.614 52.174 0.00 0.00 41.22 2.57
5222 5690 1.352687 AGAACCAAAGAGGAGGAAGGC 59.647 52.381 0.00 0.00 41.22 4.35
5262 5760 5.039920 TCAGGAGTAGCATTACGGTAGTA 57.960 43.478 0.00 0.00 34.88 1.82
5263 5761 3.894759 TCAGGAGTAGCATTACGGTAGT 58.105 45.455 0.00 0.00 34.88 2.73
5267 5765 3.621715 GGTTTTCAGGAGTAGCATTACGG 59.378 47.826 0.00 0.00 34.88 4.02
5381 5885 0.250234 TCCTTGAGACCCGCAATCTG 59.750 55.000 0.00 0.00 0.00 2.90
5382 5886 0.984230 TTCCTTGAGACCCGCAATCT 59.016 50.000 0.00 0.00 0.00 2.40
5383 5887 1.087501 GTTCCTTGAGACCCGCAATC 58.912 55.000 0.00 0.00 0.00 2.67
5384 5888 0.400213 TGTTCCTTGAGACCCGCAAT 59.600 50.000 0.00 0.00 0.00 3.56
5385 5889 0.534203 GTGTTCCTTGAGACCCGCAA 60.534 55.000 0.00 0.00 0.00 4.85
5386 5890 1.070786 GTGTTCCTTGAGACCCGCA 59.929 57.895 0.00 0.00 0.00 5.69
5387 5891 0.534203 TTGTGTTCCTTGAGACCCGC 60.534 55.000 0.00 0.00 0.00 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.