Multiple sequence alignment - TraesCS6B01G383500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G383500 chr6B 100.000 3071 0 0 1 3071 658401983 658405053 0.000000e+00 5672.0
1 TraesCS6B01G383500 chr6B 84.112 428 42 12 1116 1522 658477453 658477875 1.030000e-104 390.0
2 TraesCS6B01G383500 chr6B 84.112 428 42 12 1116 1522 658496238 658496660 1.030000e-104 390.0
3 TraesCS6B01G383500 chr6B 84.112 428 42 12 1116 1522 658515389 658515811 1.030000e-104 390.0
4 TraesCS6B01G383500 chr6B 82.292 480 38 20 1082 1524 658578433 658577964 3.740000e-99 372.0
5 TraesCS6B01G383500 chr6B 80.081 492 56 25 1116 1570 658530660 658531146 8.210000e-86 327.0
6 TraesCS6B01G383500 chr6B 91.053 190 13 2 1513 1701 658403453 658403639 1.410000e-63 254.0
7 TraesCS6B01G383500 chr6B 91.053 190 13 2 1471 1657 658403495 658403683 1.410000e-63 254.0
8 TraesCS6B01G383500 chr6B 77.703 296 31 17 1649 1943 658477823 658478084 6.860000e-32 148.0
9 TraesCS6B01G383500 chr6B 77.703 296 31 17 1649 1943 658496608 658496869 6.860000e-32 148.0
10 TraesCS6B01G383500 chr6B 77.365 296 32 17 1649 1943 658515759 658516020 3.190000e-30 143.0
11 TraesCS6B01G383500 chr6B 76.038 313 34 19 1655 1964 658578009 658577735 1.160000e-24 124.0
12 TraesCS6B01G383500 chr6B 100.000 30 0 0 1082 1111 658530611 658530640 4.280000e-04 56.5
13 TraesCS6B01G383500 chr6D 90.973 1717 102 28 517 2219 435350575 435352252 0.000000e+00 2263.0
14 TraesCS6B01G383500 chr6D 85.396 493 34 11 52 518 435349443 435349923 7.700000e-131 477.0
15 TraesCS6B01G383500 chr6D 76.678 566 68 43 743 1299 435711441 435711951 3.930000e-64 255.0
16 TraesCS6B01G383500 chr6D 78.153 444 65 21 1188 1610 435832218 435831786 1.410000e-63 254.0
17 TraesCS6B01G383500 chr6D 93.567 171 10 1 1352 1522 435962940 435962771 1.410000e-63 254.0
18 TraesCS6B01G383500 chr6D 90.860 186 14 1 1471 1653 435351541 435351726 2.370000e-61 246.0
19 TraesCS6B01G383500 chr6D 85.425 247 17 7 1082 1313 435763797 435764039 3.960000e-59 239.0
20 TraesCS6B01G383500 chr6D 89.474 190 16 2 1513 1701 435351499 435351685 1.420000e-58 237.0
21 TraesCS6B01G383500 chr6D 85.106 235 17 5 1082 1301 435963243 435963012 1.110000e-54 224.0
22 TraesCS6B01G383500 chr6D 84.821 224 29 2 1352 1570 435764108 435764331 1.430000e-53 220.0
23 TraesCS6B01G383500 chr6D 78.716 296 28 17 1649 1943 435712154 435712415 6.810000e-37 165.0
24 TraesCS6B01G383500 chr6D 77.273 286 50 11 2797 3070 435353286 435353568 1.470000e-33 154.0
25 TraesCS6B01G383500 chr6D 77.273 330 27 24 1655 1979 435962814 435962528 1.910000e-32 150.0
26 TraesCS6B01G383500 chr6D 92.683 41 3 0 964 1004 435963340 435963300 3.310000e-05 60.2
27 TraesCS6B01G383500 chr6A 92.149 968 55 9 1183 2137 582264880 582265839 0.000000e+00 1347.0
28 TraesCS6B01G383500 chr6A 87.866 478 30 15 698 1167 582264437 582264894 1.250000e-148 536.0
29 TraesCS6B01G383500 chr6A 88.144 388 44 1 25 412 582261700 582262085 7.760000e-126 460.0
30 TraesCS6B01G383500 chr6A 79.287 449 53 17 1082 1498 582638824 582638384 8.390000e-71 278.0
31 TraesCS6B01G383500 chr6A 90.000 190 15 4 1513 1701 582265173 582265359 3.060000e-60 243.0
32 TraesCS6B01G383500 chr6A 89.583 192 16 2 1471 1659 582265215 582265405 1.100000e-59 241.0
33 TraesCS6B01G383500 chr6A 92.353 170 12 1 1353 1522 582920869 582920701 1.100000e-59 241.0
34 TraesCS6B01G383500 chr6A 78.398 412 51 20 1183 1560 582516591 582516998 1.840000e-57 233.0
35 TraesCS6B01G383500 chr6A 89.017 173 15 3 1353 1522 582511648 582511819 8.630000e-51 211.0
36 TraesCS6B01G383500 chr6A 92.517 147 7 4 1558 1703 582265173 582265316 1.120000e-49 207.0
37 TraesCS6B01G383500 chr6A 77.152 302 30 19 1649 1943 582511767 582512036 4.130000e-29 139.0
38 TraesCS6B01G383500 chr6A 84.444 135 18 2 1655 1789 582920744 582920613 2.490000e-26 130.0
39 TraesCS6B01G383500 chr6A 92.308 52 2 2 2830 2881 17383394 17383345 4.250000e-09 73.1
40 TraesCS6B01G383500 chr6A 82.022 89 8 8 964 1046 581982815 581982901 5.490000e-08 69.4
41 TraesCS6B01G383500 chr6A 82.022 89 8 8 964 1046 582086405 582086491 5.490000e-08 69.4
42 TraesCS6B01G383500 chrUn 84.112 428 42 13 1116 1522 389577714 389577292 1.030000e-104 390.0
43 TraesCS6B01G383500 chrUn 84.112 428 42 13 1116 1522 465805486 465805064 1.030000e-104 390.0
44 TraesCS6B01G383500 chr1D 82.166 157 22 4 89 242 312757905 312758058 2.490000e-26 130.0
45 TraesCS6B01G383500 chr3D 82.639 144 21 3 102 242 179938270 179938412 1.160000e-24 124.0
46 TraesCS6B01G383500 chr3A 80.892 157 26 3 89 242 224369086 224369241 1.500000e-23 121.0
47 TraesCS6B01G383500 chr1A 79.618 157 26 4 89 242 392495238 392495391 1.160000e-19 108.0
48 TraesCS6B01G383500 chr7D 87.500 88 9 2 2803 2889 224048808 224048722 1.950000e-17 100.0
49 TraesCS6B01G383500 chr3B 82.075 106 16 2 140 242 257835842 257835947 1.520000e-13 87.9
50 TraesCS6B01G383500 chr2A 85.714 84 10 2 2802 2884 723516112 723516194 1.520000e-13 87.9
51 TraesCS6B01G383500 chr2B 88.571 70 7 1 2820 2889 712368443 712368511 1.960000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G383500 chr6B 658401983 658405053 3070 False 2060.000000 5672 94.035333 1 3071 3 chr6B.!!$F1 3070
1 TraesCS6B01G383500 chr6B 658477453 658478084 631 False 269.000000 390 80.907500 1116 1943 2 chr6B.!!$F2 827
2 TraesCS6B01G383500 chr6B 658496238 658496869 631 False 269.000000 390 80.907500 1116 1943 2 chr6B.!!$F3 827
3 TraesCS6B01G383500 chr6B 658515389 658516020 631 False 266.500000 390 80.738500 1116 1943 2 chr6B.!!$F4 827
4 TraesCS6B01G383500 chr6B 658577735 658578433 698 True 248.000000 372 79.165000 1082 1964 2 chr6B.!!$R1 882
5 TraesCS6B01G383500 chr6D 435349443 435353568 4125 False 675.400000 2263 86.795200 52 3070 5 chr6D.!!$F1 3018
6 TraesCS6B01G383500 chr6D 435763797 435764331 534 False 229.500000 239 85.123000 1082 1570 2 chr6D.!!$F3 488
7 TraesCS6B01G383500 chr6D 435711441 435712415 974 False 210.000000 255 77.697000 743 1943 2 chr6D.!!$F2 1200
8 TraesCS6B01G383500 chr6A 582261700 582265839 4139 False 505.666667 1347 90.043167 25 2137 6 chr6A.!!$F4 2112

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
958 3726 0.988832 TTATCCCCTCGCCACAAACT 59.011 50.0 0.0 0.0 0.0 2.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2355 5240 0.097674 GTGGCGCACAAGATTGCTAG 59.902 55.0 10.83 0.0 40.62 3.42 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
84 85 6.586344 TCAATTCTTTAGAGGGCACTATGAG 58.414 40.000 0.00 0.00 0.00 2.90
221 240 7.308450 TCATTAATCATCCAAAACCCACAAA 57.692 32.000 0.00 0.00 0.00 2.83
273 292 6.729690 TTTTCTGTGGAGACCAAATCATTT 57.270 33.333 0.00 0.00 34.18 2.32
274 293 5.710513 TTCTGTGGAGACCAAATCATTTG 57.289 39.130 2.80 2.80 40.32 2.32
301 320 9.191995 GATCAACATTTTTACTACTTTTGGGTG 57.808 33.333 0.00 0.00 0.00 4.61
310 332 5.125367 ACTACTTTTGGGTGGTCTTTTCT 57.875 39.130 0.00 0.00 0.00 2.52
311 333 5.131067 ACTACTTTTGGGTGGTCTTTTCTC 58.869 41.667 0.00 0.00 0.00 2.87
319 341 4.207955 GGGTGGTCTTTTCTCACTTCTTT 58.792 43.478 0.00 0.00 0.00 2.52
354 376 5.702670 CGGTAGCATCCATCTAATGTGAATT 59.297 40.000 0.00 0.00 0.00 2.17
376 398 1.801771 TCAACCCGCGTTCAAATACTG 59.198 47.619 4.92 0.00 0.00 2.74
421 1853 5.413833 TCAAGTTCTCCTGATGCTGAAATTC 59.586 40.000 0.00 0.00 0.00 2.17
461 1893 3.002759 GCTATTGTCTTCTCGAATTGCCC 59.997 47.826 0.00 0.00 0.00 5.36
478 1911 3.088532 TGCCCACTTCATAATTGTCCAC 58.911 45.455 0.00 0.00 0.00 4.02
493 1931 4.678509 TGTCCACGAAAAGCATATTGTC 57.321 40.909 0.00 0.00 0.00 3.18
514 1953 7.793927 TGTCCATATGCGATGTGTTTAATAA 57.206 32.000 0.00 0.00 0.00 1.40
568 2659 5.741388 AAATTGATGATCCAGAAGTACGC 57.259 39.130 0.00 0.00 0.00 4.42
611 2702 2.473984 GAGTGGTTACTTTCGTTCGTGG 59.526 50.000 0.00 0.00 37.25 4.94
677 2768 3.479269 GTCGACCTTTGCGAGCCG 61.479 66.667 3.51 0.00 38.59 5.52
692 2783 2.461903 GAGCCGAAAGAAGTATCCGAC 58.538 52.381 0.00 0.00 0.00 4.79
739 3502 3.252215 CGGACGAAAGATAGCTCTCATCT 59.748 47.826 1.56 0.00 34.15 2.90
744 3507 5.592282 ACGAAAGATAGCTCTCATCTTCTCA 59.408 40.000 10.03 0.00 40.92 3.27
762 3525 3.895041 TCTCACCTGTGTGTCATCACTTA 59.105 43.478 0.00 0.00 44.14 2.24
843 3606 1.685148 CCCTCTCTTTATGGGCAAGC 58.315 55.000 0.00 0.00 33.88 4.01
938 3706 2.905880 CGACCCGTCCGGCTATCT 60.906 66.667 0.00 0.00 33.26 1.98
946 3714 1.067071 CGTCCGGCTATCTTTATCCCC 60.067 57.143 0.00 0.00 0.00 4.81
958 3726 0.988832 TTATCCCCTCGCCACAAACT 59.011 50.000 0.00 0.00 0.00 2.66
1023 3801 6.594937 ACAAAGTGTACCGACAAAAAGAAGTA 59.405 34.615 0.00 0.00 37.31 2.24
1024 3802 6.594284 AAGTGTACCGACAAAAAGAAGTAC 57.406 37.500 0.00 0.00 37.31 2.73
1055 3833 5.474876 CAGCATACTAGATTTTGATTCCCCC 59.525 44.000 0.00 0.00 0.00 5.40
1065 3843 0.038166 TGATTCCCCCTGTGACAAGC 59.962 55.000 0.00 0.00 0.00 4.01
1373 4235 3.493503 ACTGATTTTTCTCGTTGGTCGTC 59.506 43.478 0.00 0.00 40.80 4.20
1486 4348 2.845317 ACACCGGTGGCACCTACA 60.845 61.111 36.47 0.00 35.66 2.74
1508 4373 1.925455 AGCAGGGTACTGGCATGGT 60.925 57.895 0.00 0.00 45.04 3.55
1597 4462 1.841302 GCAGGGTCACACTGGGATGA 61.841 60.000 9.72 0.00 36.48 2.92
1949 4817 7.800380 CACCGTTGCAGAATCAATAATAAGATC 59.200 37.037 0.00 0.00 0.00 2.75
1951 4819 6.517714 CGTTGCAGAATCAATAATAAGATCGC 59.482 38.462 0.00 0.00 0.00 4.58
1952 4820 6.156932 TGCAGAATCAATAATAAGATCGCG 57.843 37.500 0.00 0.00 0.00 5.87
1953 4821 5.925969 TGCAGAATCAATAATAAGATCGCGA 59.074 36.000 13.09 13.09 0.00 5.87
1954 4822 6.591448 TGCAGAATCAATAATAAGATCGCGAT 59.409 34.615 23.97 23.97 0.00 4.58
1955 4823 7.759433 TGCAGAATCAATAATAAGATCGCGATA 59.241 33.333 23.76 7.11 0.00 2.92
2081 4956 5.856455 CAGTGTTTTGAGTTTTTCGTCTGTT 59.144 36.000 0.00 0.00 0.00 3.16
2082 4957 6.362283 CAGTGTTTTGAGTTTTTCGTCTGTTT 59.638 34.615 0.00 0.00 0.00 2.83
2083 4958 7.535940 CAGTGTTTTGAGTTTTTCGTCTGTTTA 59.464 33.333 0.00 0.00 0.00 2.01
2112 4987 9.436957 ACACTGTATAATCTTGTAAGTTTCCTG 57.563 33.333 0.00 0.00 0.00 3.86
2123 4999 4.888823 TGTAAGTTTCCTGTGGTTAAACCC 59.111 41.667 0.00 0.00 37.50 4.11
2132 5008 4.939439 CCTGTGGTTAAACCCTGTATGTAC 59.061 45.833 0.00 0.00 37.50 2.90
2137 5013 4.696877 GGTTAAACCCTGTATGTACGCTTT 59.303 41.667 0.00 0.00 30.04 3.51
2151 5027 1.849097 CGCTTTACGGTATGGTCCTC 58.151 55.000 0.00 0.00 38.44 3.71
2152 5028 1.849097 GCTTTACGGTATGGTCCTCG 58.151 55.000 0.00 0.00 0.00 4.63
2153 5029 1.849097 CTTTACGGTATGGTCCTCGC 58.151 55.000 0.00 0.00 0.00 5.03
2160 5036 0.030369 GTATGGTCCTCGCGTACAGG 59.970 60.000 5.77 5.90 0.00 4.00
2162 5038 1.255667 ATGGTCCTCGCGTACAGGTT 61.256 55.000 5.77 0.00 32.20 3.50
2171 5047 4.379813 CCTCGCGTACAGGTTAGTTCTTTA 60.380 45.833 5.77 0.00 0.00 1.85
2172 5048 5.314923 TCGCGTACAGGTTAGTTCTTTAT 57.685 39.130 5.77 0.00 0.00 1.40
2173 5049 5.335127 TCGCGTACAGGTTAGTTCTTTATC 58.665 41.667 5.77 0.00 0.00 1.75
2174 5050 5.097529 CGCGTACAGGTTAGTTCTTTATCA 58.902 41.667 0.00 0.00 0.00 2.15
2177 5053 7.201496 CGCGTACAGGTTAGTTCTTTATCAAAT 60.201 37.037 0.00 0.00 0.00 2.32
2178 5054 9.090692 GCGTACAGGTTAGTTCTTTATCAAATA 57.909 33.333 0.00 0.00 0.00 1.40
2222 5107 5.975410 GCTTAAGAGCGTCATATGTCTTT 57.025 39.130 6.67 0.00 39.48 2.52
2223 5108 6.351327 GCTTAAGAGCGTCATATGTCTTTT 57.649 37.500 6.67 7.24 39.48 2.27
2226 5111 7.201565 GCTTAAGAGCGTCATATGTCTTTTCTT 60.202 37.037 6.67 11.89 39.48 2.52
2227 5112 8.547967 TTAAGAGCGTCATATGTCTTTTCTTT 57.452 30.769 10.54 0.00 31.69 2.52
2228 5113 7.440523 AAGAGCGTCATATGTCTTTTCTTTT 57.559 32.000 1.90 0.00 0.00 2.27
2230 5115 7.522374 AGAGCGTCATATGTCTTTTCTTTTTC 58.478 34.615 1.90 0.00 0.00 2.29
2231 5116 7.173218 AGAGCGTCATATGTCTTTTCTTTTTCA 59.827 33.333 1.90 0.00 0.00 2.69
2232 5117 7.648142 AGCGTCATATGTCTTTTCTTTTTCAA 58.352 30.769 1.90 0.00 0.00 2.69
2234 5119 7.061094 GCGTCATATGTCTTTTCTTTTTCAAGG 59.939 37.037 1.90 0.00 0.00 3.61
2235 5120 8.289618 CGTCATATGTCTTTTCTTTTTCAAGGA 58.710 33.333 1.90 0.00 0.00 3.36
2236 5121 9.965824 GTCATATGTCTTTTCTTTTTCAAGGAA 57.034 29.630 1.90 0.00 0.00 3.36
2241 5126 5.991328 CTTTTCTTTTTCAAGGAAAGCCC 57.009 39.130 3.35 0.00 44.99 5.19
2242 5127 4.415881 TTTCTTTTTCAAGGAAAGCCCC 57.584 40.909 0.00 0.00 34.80 5.80
2245 5130 3.324556 TCTTTTTCAAGGAAAGCCCCATG 59.675 43.478 0.00 0.00 34.80 3.66
2246 5131 1.643310 TTTCAAGGAAAGCCCCATGG 58.357 50.000 4.14 4.14 34.66 3.66
2256 5141 2.440796 CCCCATGGCGCACTTCAT 60.441 61.111 10.83 0.00 0.00 2.57
2257 5142 2.053865 CCCCATGGCGCACTTCATT 61.054 57.895 10.83 0.00 0.00 2.57
2258 5143 1.606885 CCCCATGGCGCACTTCATTT 61.607 55.000 10.83 0.00 0.00 2.32
2260 5145 1.682854 CCCATGGCGCACTTCATTTAT 59.317 47.619 10.83 0.00 0.00 1.40
2261 5146 2.101249 CCCATGGCGCACTTCATTTATT 59.899 45.455 10.83 0.00 0.00 1.40
2262 5147 3.317711 CCCATGGCGCACTTCATTTATTA 59.682 43.478 10.83 0.00 0.00 0.98
2263 5148 4.022068 CCCATGGCGCACTTCATTTATTAT 60.022 41.667 10.83 0.00 0.00 1.28
2264 5149 5.509501 CCCATGGCGCACTTCATTTATTATT 60.510 40.000 10.83 0.00 0.00 1.40
2265 5150 6.294453 CCCATGGCGCACTTCATTTATTATTA 60.294 38.462 10.83 0.00 0.00 0.98
2266 5151 7.144661 CCATGGCGCACTTCATTTATTATTAA 58.855 34.615 10.83 0.00 0.00 1.40
2267 5152 7.651304 CCATGGCGCACTTCATTTATTATTAAA 59.349 33.333 10.83 0.00 0.00 1.52
2268 5153 9.029243 CATGGCGCACTTCATTTATTATTAAAA 57.971 29.630 10.83 0.00 31.33 1.52
2269 5154 8.988064 TGGCGCACTTCATTTATTATTAAAAA 57.012 26.923 10.83 0.00 31.33 1.94
2270 5155 9.081997 TGGCGCACTTCATTTATTATTAAAAAG 57.918 29.630 10.83 0.00 31.33 2.27
2271 5156 8.539674 GGCGCACTTCATTTATTATTAAAAAGG 58.460 33.333 10.83 0.00 31.33 3.11
2272 5157 9.296400 GCGCACTTCATTTATTATTAAAAAGGA 57.704 29.630 0.30 0.00 31.33 3.36
2291 5176 9.696917 AAAAAGGACTACATCATTGAAAACATC 57.303 29.630 0.00 0.00 29.94 3.06
2292 5177 8.408043 AAAGGACTACATCATTGAAAACATCA 57.592 30.769 0.00 0.00 29.94 3.07
2293 5178 7.383102 AGGACTACATCATTGAAAACATCAC 57.617 36.000 0.00 0.00 37.92 3.06
2295 5180 7.667219 AGGACTACATCATTGAAAACATCACTT 59.333 33.333 0.00 0.00 37.92 3.16
2296 5181 7.965107 GGACTACATCATTGAAAACATCACTTC 59.035 37.037 0.00 0.00 37.92 3.01
2298 5183 9.725019 ACTACATCATTGAAAACATCACTTCTA 57.275 29.630 0.00 0.00 37.92 2.10
2309 5194 9.543018 GAAAACATCACTTCTAATAAAACTCGG 57.457 33.333 0.00 0.00 0.00 4.63
2310 5195 7.611213 AACATCACTTCTAATAAAACTCGGG 57.389 36.000 0.00 0.00 0.00 5.14
2311 5196 6.942976 ACATCACTTCTAATAAAACTCGGGA 58.057 36.000 0.00 0.00 0.00 5.14
2312 5197 7.042335 ACATCACTTCTAATAAAACTCGGGAG 58.958 38.462 0.00 0.00 0.00 4.30
2313 5198 6.600882 TCACTTCTAATAAAACTCGGGAGT 57.399 37.500 0.00 0.00 44.94 3.85
2314 5199 7.707624 TCACTTCTAATAAAACTCGGGAGTA 57.292 36.000 1.08 0.00 41.58 2.59
2315 5200 8.302515 TCACTTCTAATAAAACTCGGGAGTAT 57.697 34.615 1.08 0.00 41.58 2.12
2316 5201 8.411683 TCACTTCTAATAAAACTCGGGAGTATC 58.588 37.037 1.08 0.00 41.58 2.24
2317 5202 8.195436 CACTTCTAATAAAACTCGGGAGTATCA 58.805 37.037 1.08 0.00 41.58 2.15
2320 5205 4.684484 ATAAAACTCGGGAGTATCACCC 57.316 45.455 1.08 0.00 41.58 4.61
2321 5206 2.249309 AAACTCGGGAGTATCACCCT 57.751 50.000 1.08 0.00 44.72 4.34
2329 5214 3.732048 GGAGTATCACCCTCCCAAAAA 57.268 47.619 0.00 0.00 42.29 1.94
2330 5215 3.353557 GGAGTATCACCCTCCCAAAAAC 58.646 50.000 0.00 0.00 42.29 2.43
2331 5216 3.010250 GGAGTATCACCCTCCCAAAAACT 59.990 47.826 0.00 0.00 42.29 2.66
2332 5217 4.226620 GGAGTATCACCCTCCCAAAAACTA 59.773 45.833 0.00 0.00 42.29 2.24
2333 5218 5.104067 GGAGTATCACCCTCCCAAAAACTAT 60.104 44.000 0.00 0.00 42.29 2.12
2334 5219 5.755849 AGTATCACCCTCCCAAAAACTATG 58.244 41.667 0.00 0.00 0.00 2.23
2336 5221 4.733077 TCACCCTCCCAAAAACTATGAA 57.267 40.909 0.00 0.00 0.00 2.57
2339 5224 6.081356 TCACCCTCCCAAAAACTATGAATTT 58.919 36.000 0.00 0.00 0.00 1.82
2343 5228 7.237471 ACCCTCCCAAAAACTATGAATTTGAAT 59.763 33.333 0.00 0.00 36.41 2.57
2344 5229 7.765819 CCCTCCCAAAAACTATGAATTTGAATC 59.234 37.037 0.00 0.00 36.41 2.52
2345 5230 8.313292 CCTCCCAAAAACTATGAATTTGAATCA 58.687 33.333 0.00 0.00 36.41 2.57
2346 5231 9.709495 CTCCCAAAAACTATGAATTTGAATCAA 57.291 29.630 0.00 0.00 36.41 2.57
2363 5248 9.740239 TTTGAATCAAAAGCATATCTAGCAATC 57.260 29.630 5.87 0.00 29.89 2.67
2364 5249 8.687292 TGAATCAAAAGCATATCTAGCAATCT 57.313 30.769 0.00 0.00 0.00 2.40
2365 5250 9.128404 TGAATCAAAAGCATATCTAGCAATCTT 57.872 29.630 0.00 0.00 0.00 2.40
2366 5251 9.395707 GAATCAAAAGCATATCTAGCAATCTTG 57.604 33.333 0.00 0.00 0.00 3.02
2367 5252 7.870509 TCAAAAGCATATCTAGCAATCTTGT 57.129 32.000 0.00 0.00 0.00 3.16
2369 5254 5.686159 AAGCATATCTAGCAATCTTGTGC 57.314 39.130 0.00 0.00 45.28 4.57
2376 5261 2.568090 CAATCTTGTGCGCCACCC 59.432 61.111 4.18 0.00 32.73 4.61
2377 5262 2.676471 AATCTTGTGCGCCACCCC 60.676 61.111 4.18 0.00 32.73 4.95
2379 5264 2.786512 AATCTTGTGCGCCACCCCAT 62.787 55.000 4.18 0.00 32.73 4.00
2380 5265 2.786512 ATCTTGTGCGCCACCCCATT 62.787 55.000 4.18 0.00 32.73 3.16
2381 5266 1.677300 CTTGTGCGCCACCCCATTA 60.677 57.895 4.18 0.00 32.73 1.90
2383 5268 3.518068 GTGCGCCACCCCATTAGC 61.518 66.667 4.18 0.00 0.00 3.09
2384 5269 3.727258 TGCGCCACCCCATTAGCT 61.727 61.111 4.18 0.00 0.00 3.32
2386 5271 2.481471 GCGCCACCCCATTAGCTTC 61.481 63.158 0.00 0.00 0.00 3.86
2387 5272 1.823899 CGCCACCCCATTAGCTTCC 60.824 63.158 0.00 0.00 0.00 3.46
2388 5273 1.823899 GCCACCCCATTAGCTTCCG 60.824 63.158 0.00 0.00 0.00 4.30
2389 5274 1.607612 CCACCCCATTAGCTTCCGT 59.392 57.895 0.00 0.00 0.00 4.69
2393 5278 2.169769 CACCCCATTAGCTTCCGTAGAA 59.830 50.000 0.00 0.00 0.00 2.10
2396 5281 3.370103 CCCCATTAGCTTCCGTAGAACAA 60.370 47.826 0.00 0.00 0.00 2.83
2403 5288 8.826710 CATTAGCTTCCGTAGAACAATGAATAA 58.173 33.333 0.00 0.00 29.80 1.40
2404 5289 6.663944 AGCTTCCGTAGAACAATGAATAAC 57.336 37.500 0.00 0.00 0.00 1.89
2406 5291 5.585047 GCTTCCGTAGAACAATGAATAACCT 59.415 40.000 0.00 0.00 0.00 3.50
2407 5292 6.093633 GCTTCCGTAGAACAATGAATAACCTT 59.906 38.462 0.00 0.00 0.00 3.50
2408 5293 6.978343 TCCGTAGAACAATGAATAACCTTG 57.022 37.500 0.00 0.00 0.00 3.61
2410 5295 7.335627 TCCGTAGAACAATGAATAACCTTGAT 58.664 34.615 0.00 0.00 0.00 2.57
2411 5296 8.479689 TCCGTAGAACAATGAATAACCTTGATA 58.520 33.333 0.00 0.00 0.00 2.15
2412 5297 8.765219 CCGTAGAACAATGAATAACCTTGATAG 58.235 37.037 0.00 0.00 0.00 2.08
2413 5298 9.529325 CGTAGAACAATGAATAACCTTGATAGA 57.471 33.333 0.00 0.00 0.00 1.98
2415 5300 8.443953 AGAACAATGAATAACCTTGATAGAGC 57.556 34.615 0.00 0.00 0.00 4.09
2416 5301 7.500559 AGAACAATGAATAACCTTGATAGAGCC 59.499 37.037 0.00 0.00 0.00 4.70
2418 5303 7.293073 ACAATGAATAACCTTGATAGAGCCAT 58.707 34.615 0.00 0.00 0.00 4.40
2419 5304 7.230108 ACAATGAATAACCTTGATAGAGCCATG 59.770 37.037 0.00 0.00 0.00 3.66
2420 5305 5.065914 TGAATAACCTTGATAGAGCCATGC 58.934 41.667 0.00 0.00 0.00 4.06
2422 5307 2.338577 ACCTTGATAGAGCCATGCAC 57.661 50.000 0.00 0.00 0.00 4.57
2424 5309 2.240667 ACCTTGATAGAGCCATGCACTT 59.759 45.455 0.00 0.00 31.13 3.16
2425 5310 2.617308 CCTTGATAGAGCCATGCACTTG 59.383 50.000 0.00 0.00 31.13 3.16
2426 5311 2.336945 TGATAGAGCCATGCACTTGG 57.663 50.000 1.68 1.68 39.94 3.61
2429 5314 3.117776 TGATAGAGCCATGCACTTGGAAT 60.118 43.478 10.63 0.00 39.25 3.01
2431 5316 2.532843 AGAGCCATGCACTTGGAATTT 58.467 42.857 10.63 0.00 39.25 1.82
2432 5317 2.232941 AGAGCCATGCACTTGGAATTTG 59.767 45.455 10.63 0.00 39.25 2.32
2433 5318 1.972795 AGCCATGCACTTGGAATTTGT 59.027 42.857 10.63 0.00 39.25 2.83
2434 5319 2.070783 GCCATGCACTTGGAATTTGTG 58.929 47.619 10.63 0.00 39.25 3.33
2435 5320 2.690786 CCATGCACTTGGAATTTGTGG 58.309 47.619 0.00 0.00 39.25 4.17
2436 5321 2.299582 CCATGCACTTGGAATTTGTGGA 59.700 45.455 0.00 0.00 39.25 4.02
2437 5322 3.244146 CCATGCACTTGGAATTTGTGGAA 60.244 43.478 0.00 0.00 39.25 3.53
2438 5323 4.378774 CATGCACTTGGAATTTGTGGAAA 58.621 39.130 0.00 0.00 35.81 3.13
2439 5324 3.791245 TGCACTTGGAATTTGTGGAAAC 58.209 40.909 0.00 0.00 32.85 2.78
2440 5325 3.196469 TGCACTTGGAATTTGTGGAAACA 59.804 39.130 0.00 0.00 38.70 2.83
2441 5326 4.141756 TGCACTTGGAATTTGTGGAAACAT 60.142 37.500 0.00 0.00 46.14 2.71
2442 5327 4.815846 GCACTTGGAATTTGTGGAAACATT 59.184 37.500 0.00 0.00 46.14 2.71
2443 5328 5.050159 GCACTTGGAATTTGTGGAAACATTC 60.050 40.000 0.00 0.00 46.14 2.67
2458 5343 5.995055 GAAACATTCCATCAGTATAGCAGC 58.005 41.667 0.00 0.00 0.00 5.25
2459 5344 4.694760 ACATTCCATCAGTATAGCAGCA 57.305 40.909 0.00 0.00 0.00 4.41
2460 5345 5.238624 ACATTCCATCAGTATAGCAGCAT 57.761 39.130 0.00 0.00 0.00 3.79
2461 5346 6.364568 ACATTCCATCAGTATAGCAGCATA 57.635 37.500 0.00 0.00 0.00 3.14
2462 5347 6.955364 ACATTCCATCAGTATAGCAGCATAT 58.045 36.000 0.00 0.00 0.00 1.78
2463 5348 6.822170 ACATTCCATCAGTATAGCAGCATATG 59.178 38.462 0.00 0.00 0.00 1.78
2464 5349 5.349061 TCCATCAGTATAGCAGCATATGG 57.651 43.478 4.56 0.00 35.10 2.74
2465 5350 5.025453 TCCATCAGTATAGCAGCATATGGA 58.975 41.667 4.56 0.00 39.36 3.41
2466 5351 5.105187 TCCATCAGTATAGCAGCATATGGAC 60.105 44.000 4.56 0.00 37.35 4.02
2467 5352 4.808414 TCAGTATAGCAGCATATGGACC 57.192 45.455 4.56 0.00 0.00 4.46
2468 5353 4.420206 TCAGTATAGCAGCATATGGACCT 58.580 43.478 4.56 0.00 0.00 3.85
2469 5354 5.580022 TCAGTATAGCAGCATATGGACCTA 58.420 41.667 4.56 0.00 0.00 3.08
2470 5355 5.654209 TCAGTATAGCAGCATATGGACCTAG 59.346 44.000 4.56 0.00 0.00 3.02
2471 5356 3.902881 ATAGCAGCATATGGACCTAGC 57.097 47.619 4.56 1.06 0.00 3.42
2472 5357 1.427809 AGCAGCATATGGACCTAGCA 58.572 50.000 4.56 0.00 0.00 3.49
2473 5358 1.071385 AGCAGCATATGGACCTAGCAC 59.929 52.381 4.56 0.00 0.00 4.40
2474 5359 1.879796 GCAGCATATGGACCTAGCACC 60.880 57.143 4.56 0.00 0.00 5.01
2475 5360 1.696336 CAGCATATGGACCTAGCACCT 59.304 52.381 4.56 0.00 0.00 4.00
2476 5361 1.974236 AGCATATGGACCTAGCACCTC 59.026 52.381 4.56 0.00 0.00 3.85
2477 5362 1.974236 GCATATGGACCTAGCACCTCT 59.026 52.381 4.56 0.00 0.00 3.69
2478 5363 2.289320 GCATATGGACCTAGCACCTCTG 60.289 54.545 4.56 2.43 0.00 3.35
2479 5364 2.848678 TATGGACCTAGCACCTCTGT 57.151 50.000 0.00 0.00 0.00 3.41
2480 5365 1.490574 ATGGACCTAGCACCTCTGTC 58.509 55.000 0.00 0.00 0.00 3.51
2481 5366 0.409876 TGGACCTAGCACCTCTGTCT 59.590 55.000 0.00 0.00 0.00 3.41
2482 5367 1.107945 GGACCTAGCACCTCTGTCTC 58.892 60.000 0.00 0.00 0.00 3.36
2483 5368 1.617263 GGACCTAGCACCTCTGTCTCA 60.617 57.143 0.00 0.00 0.00 3.27
2484 5369 1.474879 GACCTAGCACCTCTGTCTCAC 59.525 57.143 0.00 0.00 0.00 3.51
2485 5370 0.820871 CCTAGCACCTCTGTCTCACC 59.179 60.000 0.00 0.00 0.00 4.02
2486 5371 1.550327 CTAGCACCTCTGTCTCACCA 58.450 55.000 0.00 0.00 0.00 4.17
2487 5372 2.106566 CTAGCACCTCTGTCTCACCAT 58.893 52.381 0.00 0.00 0.00 3.55
2488 5373 1.356124 AGCACCTCTGTCTCACCATT 58.644 50.000 0.00 0.00 0.00 3.16
2489 5374 2.540383 AGCACCTCTGTCTCACCATTA 58.460 47.619 0.00 0.00 0.00 1.90
2490 5375 2.234908 AGCACCTCTGTCTCACCATTAC 59.765 50.000 0.00 0.00 0.00 1.89
2491 5376 2.028112 GCACCTCTGTCTCACCATTACA 60.028 50.000 0.00 0.00 0.00 2.41
2492 5377 3.369892 GCACCTCTGTCTCACCATTACAT 60.370 47.826 0.00 0.00 0.00 2.29
2493 5378 4.141937 GCACCTCTGTCTCACCATTACATA 60.142 45.833 0.00 0.00 0.00 2.29
2494 5379 5.352284 CACCTCTGTCTCACCATTACATAC 58.648 45.833 0.00 0.00 0.00 2.39
2495 5380 5.127845 CACCTCTGTCTCACCATTACATACT 59.872 44.000 0.00 0.00 0.00 2.12
2496 5381 5.721960 ACCTCTGTCTCACCATTACATACTT 59.278 40.000 0.00 0.00 0.00 2.24
2497 5382 6.127310 ACCTCTGTCTCACCATTACATACTTC 60.127 42.308 0.00 0.00 0.00 3.01
2498 5383 6.127338 CCTCTGTCTCACCATTACATACTTCA 60.127 42.308 0.00 0.00 0.00 3.02
2499 5384 6.867550 TCTGTCTCACCATTACATACTTCAG 58.132 40.000 0.00 0.00 0.00 3.02
2500 5385 5.419542 TGTCTCACCATTACATACTTCAGC 58.580 41.667 0.00 0.00 0.00 4.26
2501 5386 5.046663 TGTCTCACCATTACATACTTCAGCA 60.047 40.000 0.00 0.00 0.00 4.41
2502 5387 5.874810 GTCTCACCATTACATACTTCAGCAA 59.125 40.000 0.00 0.00 0.00 3.91
2503 5388 6.540189 GTCTCACCATTACATACTTCAGCAAT 59.460 38.462 0.00 0.00 0.00 3.56
2504 5389 6.763135 TCTCACCATTACATACTTCAGCAATC 59.237 38.462 0.00 0.00 0.00 2.67
2505 5390 6.413892 TCACCATTACATACTTCAGCAATCA 58.586 36.000 0.00 0.00 0.00 2.57
2506 5391 6.316140 TCACCATTACATACTTCAGCAATCAC 59.684 38.462 0.00 0.00 0.00 3.06
2507 5392 5.590259 ACCATTACATACTTCAGCAATCACC 59.410 40.000 0.00 0.00 0.00 4.02
2508 5393 5.589855 CCATTACATACTTCAGCAATCACCA 59.410 40.000 0.00 0.00 0.00 4.17
2509 5394 6.238566 CCATTACATACTTCAGCAATCACCAG 60.239 42.308 0.00 0.00 0.00 4.00
2510 5395 3.614092 ACATACTTCAGCAATCACCAGG 58.386 45.455 0.00 0.00 0.00 4.45
2511 5396 2.113860 TACTTCAGCAATCACCAGGC 57.886 50.000 0.00 0.00 0.00 4.85
2512 5397 0.610232 ACTTCAGCAATCACCAGGCC 60.610 55.000 0.00 0.00 0.00 5.19
2513 5398 1.651240 CTTCAGCAATCACCAGGCCG 61.651 60.000 0.00 0.00 0.00 6.13
2514 5399 3.136123 CAGCAATCACCAGGCCGG 61.136 66.667 11.48 11.48 42.50 6.13
2523 5408 2.203422 CCAGGCCGGTGGTTTCAA 60.203 61.111 1.90 0.00 32.32 2.69
2524 5409 1.606313 CCAGGCCGGTGGTTTCAAT 60.606 57.895 1.90 0.00 32.32 2.57
2525 5410 1.184970 CCAGGCCGGTGGTTTCAATT 61.185 55.000 1.90 0.00 32.32 2.32
2526 5411 0.678950 CAGGCCGGTGGTTTCAATTT 59.321 50.000 1.90 0.00 0.00 1.82
2527 5412 1.069978 CAGGCCGGTGGTTTCAATTTT 59.930 47.619 1.90 0.00 0.00 1.82
2528 5413 1.343142 AGGCCGGTGGTTTCAATTTTC 59.657 47.619 1.90 0.00 0.00 2.29
2529 5414 1.606994 GGCCGGTGGTTTCAATTTTCC 60.607 52.381 1.90 0.00 0.00 3.13
2530 5415 1.606994 GCCGGTGGTTTCAATTTTCCC 60.607 52.381 1.90 0.00 0.00 3.97
2531 5416 1.001520 CCGGTGGTTTCAATTTTCCCC 59.998 52.381 0.00 0.00 0.00 4.81
2532 5417 1.967779 CGGTGGTTTCAATTTTCCCCT 59.032 47.619 0.00 0.00 0.00 4.79
2533 5418 2.367241 CGGTGGTTTCAATTTTCCCCTT 59.633 45.455 0.00 0.00 0.00 3.95
2534 5419 3.181459 CGGTGGTTTCAATTTTCCCCTTT 60.181 43.478 0.00 0.00 0.00 3.11
2535 5420 4.684757 CGGTGGTTTCAATTTTCCCCTTTT 60.685 41.667 0.00 0.00 0.00 2.27
2536 5421 4.819630 GGTGGTTTCAATTTTCCCCTTTTC 59.180 41.667 0.00 0.00 0.00 2.29
2537 5422 5.432645 GTGGTTTCAATTTTCCCCTTTTCA 58.567 37.500 0.00 0.00 0.00 2.69
2538 5423 6.061441 GTGGTTTCAATTTTCCCCTTTTCAT 58.939 36.000 0.00 0.00 0.00 2.57
2539 5424 6.545666 GTGGTTTCAATTTTCCCCTTTTCATT 59.454 34.615 0.00 0.00 0.00 2.57
2540 5425 7.068103 GTGGTTTCAATTTTCCCCTTTTCATTT 59.932 33.333 0.00 0.00 0.00 2.32
2541 5426 7.617329 TGGTTTCAATTTTCCCCTTTTCATTTT 59.383 29.630 0.00 0.00 0.00 1.82
2542 5427 8.134895 GGTTTCAATTTTCCCCTTTTCATTTTC 58.865 33.333 0.00 0.00 0.00 2.29
2543 5428 7.489574 TTCAATTTTCCCCTTTTCATTTTCG 57.510 32.000 0.00 0.00 0.00 3.46
2544 5429 6.587273 TCAATTTTCCCCTTTTCATTTTCGT 58.413 32.000 0.00 0.00 0.00 3.85
2545 5430 7.051000 TCAATTTTCCCCTTTTCATTTTCGTT 58.949 30.769 0.00 0.00 0.00 3.85
2546 5431 7.554476 TCAATTTTCCCCTTTTCATTTTCGTTT 59.446 29.630 0.00 0.00 0.00 3.60
2547 5432 7.873719 ATTTTCCCCTTTTCATTTTCGTTTT 57.126 28.000 0.00 0.00 0.00 2.43
2548 5433 8.966069 ATTTTCCCCTTTTCATTTTCGTTTTA 57.034 26.923 0.00 0.00 0.00 1.52
2549 5434 8.966069 TTTTCCCCTTTTCATTTTCGTTTTAT 57.034 26.923 0.00 0.00 0.00 1.40
2550 5435 7.954788 TTCCCCTTTTCATTTTCGTTTTATG 57.045 32.000 0.00 0.00 0.00 1.90
2551 5436 7.291411 TCCCCTTTTCATTTTCGTTTTATGA 57.709 32.000 0.00 0.00 0.00 2.15
2552 5437 7.727181 TCCCCTTTTCATTTTCGTTTTATGAA 58.273 30.769 0.00 0.00 36.72 2.57
2553 5438 7.654116 TCCCCTTTTCATTTTCGTTTTATGAAC 59.346 33.333 0.00 0.00 37.84 3.18
2554 5439 7.655732 CCCCTTTTCATTTTCGTTTTATGAACT 59.344 33.333 0.00 0.00 37.84 3.01
2555 5440 9.040939 CCCTTTTCATTTTCGTTTTATGAACTT 57.959 29.630 0.00 0.00 37.84 2.66
2575 5460 9.273016 TGAACTTCTTTCAAATTCTCGAATACT 57.727 29.630 0.00 0.00 41.51 2.12
2577 5462 9.884465 AACTTCTTTCAAATTCTCGAATACTTG 57.116 29.630 0.00 0.00 0.00 3.16
2578 5463 8.017946 ACTTCTTTCAAATTCTCGAATACTTGC 58.982 33.333 0.00 0.00 0.00 4.01
2579 5464 7.672983 TCTTTCAAATTCTCGAATACTTGCT 57.327 32.000 0.00 0.00 0.00 3.91
2580 5465 7.521529 TCTTTCAAATTCTCGAATACTTGCTG 58.478 34.615 0.00 0.00 0.00 4.41
2581 5466 7.387673 TCTTTCAAATTCTCGAATACTTGCTGA 59.612 33.333 0.00 0.00 0.00 4.26
2582 5467 7.433708 TTCAAATTCTCGAATACTTGCTGAA 57.566 32.000 0.00 0.00 0.00 3.02
2583 5468 7.433708 TCAAATTCTCGAATACTTGCTGAAA 57.566 32.000 0.00 0.00 0.00 2.69
2584 5469 8.044060 TCAAATTCTCGAATACTTGCTGAAAT 57.956 30.769 0.00 0.00 0.00 2.17
2585 5470 8.177663 TCAAATTCTCGAATACTTGCTGAAATC 58.822 33.333 0.00 0.00 0.00 2.17
2586 5471 7.615582 AATTCTCGAATACTTGCTGAAATCA 57.384 32.000 0.00 0.00 0.00 2.57
2587 5472 7.798596 ATTCTCGAATACTTGCTGAAATCAT 57.201 32.000 0.00 0.00 0.00 2.45
2588 5473 6.594284 TCTCGAATACTTGCTGAAATCATG 57.406 37.500 0.00 0.00 0.00 3.07
2589 5474 6.340522 TCTCGAATACTTGCTGAAATCATGA 58.659 36.000 0.00 0.00 0.00 3.07
2590 5475 6.478016 TCTCGAATACTTGCTGAAATCATGAG 59.522 38.462 0.09 0.00 0.00 2.90
2591 5476 5.007039 TCGAATACTTGCTGAAATCATGAGC 59.993 40.000 0.09 0.00 0.00 4.26
2592 5477 5.220719 CGAATACTTGCTGAAATCATGAGCA 60.221 40.000 0.09 1.57 40.94 4.26
2593 5478 6.512903 CGAATACTTGCTGAAATCATGAGCAT 60.513 38.462 7.33 0.00 42.17 3.79
2594 5479 6.710597 ATACTTGCTGAAATCATGAGCATT 57.289 33.333 7.33 0.00 42.17 3.56
2595 5480 5.401531 ACTTGCTGAAATCATGAGCATTT 57.598 34.783 7.33 0.19 42.17 2.32
2596 5481 5.790593 ACTTGCTGAAATCATGAGCATTTT 58.209 33.333 7.33 0.00 42.17 1.82
2597 5482 6.228258 ACTTGCTGAAATCATGAGCATTTTT 58.772 32.000 7.33 0.00 42.17 1.94
2598 5483 6.147164 ACTTGCTGAAATCATGAGCATTTTTG 59.853 34.615 7.33 0.11 42.17 2.44
2599 5484 4.390603 TGCTGAAATCATGAGCATTTTTGC 59.609 37.500 0.09 6.54 37.81 3.68
2600 5485 4.390603 GCTGAAATCATGAGCATTTTTGCA 59.609 37.500 0.09 0.00 37.25 4.08
2601 5486 5.106869 GCTGAAATCATGAGCATTTTTGCAA 60.107 36.000 0.09 0.00 37.25 4.08
2602 5487 6.403200 GCTGAAATCATGAGCATTTTTGCAAT 60.403 34.615 0.00 0.00 37.25 3.56
2603 5488 7.441890 TGAAATCATGAGCATTTTTGCAATT 57.558 28.000 0.00 0.00 37.25 2.32
2604 5489 7.523219 TGAAATCATGAGCATTTTTGCAATTC 58.477 30.769 0.00 0.00 37.25 2.17
2605 5490 7.173390 TGAAATCATGAGCATTTTTGCAATTCA 59.827 29.630 0.00 0.00 37.25 2.57
2606 5491 7.624360 AATCATGAGCATTTTTGCAATTCAT 57.376 28.000 0.00 1.05 37.25 2.57
2607 5492 6.415798 TCATGAGCATTTTTGCAATTCATG 57.584 33.333 16.42 16.42 41.89 3.07
2608 5493 6.166982 TCATGAGCATTTTTGCAATTCATGA 58.833 32.000 19.16 19.16 44.36 3.07
2609 5494 6.651225 TCATGAGCATTTTTGCAATTCATGAA 59.349 30.769 20.07 11.26 43.99 2.57
2610 5495 7.335673 TCATGAGCATTTTTGCAATTCATGAAT 59.664 29.630 20.07 15.36 43.99 2.57
2611 5496 8.608317 CATGAGCATTTTTGCAATTCATGAATA 58.392 29.630 21.00 3.28 42.52 1.75
2612 5497 8.725405 TGAGCATTTTTGCAATTCATGAATAT 57.275 26.923 21.00 6.58 37.25 1.28
2613 5498 9.819267 TGAGCATTTTTGCAATTCATGAATATA 57.181 25.926 21.00 8.04 37.25 0.86
2664 5549 8.455598 AATAATAAACATTTTTCGAACACCGG 57.544 30.769 0.00 0.00 39.14 5.28
2666 5551 3.343380 AACATTTTTCGAACACCGGAC 57.657 42.857 9.46 0.00 39.14 4.79
2669 5554 3.316868 ACATTTTTCGAACACCGGACATT 59.683 39.130 9.46 0.00 39.14 2.71
2694 5579 5.622770 TTTATGAAGTCCCGAGCTTTTTC 57.377 39.130 0.00 0.00 0.00 2.29
2696 5581 2.494059 TGAAGTCCCGAGCTTTTTCTG 58.506 47.619 0.00 0.00 0.00 3.02
2697 5582 2.104111 TGAAGTCCCGAGCTTTTTCTGA 59.896 45.455 0.00 0.00 0.00 3.27
2699 5584 3.208747 AGTCCCGAGCTTTTTCTGAAA 57.791 42.857 0.00 0.00 0.00 2.69
2700 5585 3.756117 AGTCCCGAGCTTTTTCTGAAAT 58.244 40.909 3.31 0.00 0.00 2.17
2701 5586 4.145052 AGTCCCGAGCTTTTTCTGAAATT 58.855 39.130 3.31 0.00 0.00 1.82
2702 5587 4.022849 AGTCCCGAGCTTTTTCTGAAATTG 60.023 41.667 3.31 1.61 0.00 2.32
2703 5588 3.888930 TCCCGAGCTTTTTCTGAAATTGT 59.111 39.130 3.31 0.00 0.00 2.71
2704 5589 3.983344 CCCGAGCTTTTTCTGAAATTGTG 59.017 43.478 3.31 0.00 0.00 3.33
2705 5590 4.261572 CCCGAGCTTTTTCTGAAATTGTGA 60.262 41.667 3.31 0.00 0.00 3.58
2706 5591 5.280945 CCGAGCTTTTTCTGAAATTGTGAA 58.719 37.500 3.31 0.00 0.00 3.18
2707 5592 5.748152 CCGAGCTTTTTCTGAAATTGTGAAA 59.252 36.000 3.31 0.00 0.00 2.69
2708 5593 6.421801 CCGAGCTTTTTCTGAAATTGTGAAAT 59.578 34.615 3.31 0.00 31.08 2.17
2709 5594 7.042523 CCGAGCTTTTTCTGAAATTGTGAAATT 60.043 33.333 3.31 0.00 31.08 1.82
2739 5624 8.409358 AGAGTATGCAAACATTTTTAGGAAGT 57.591 30.769 0.00 0.00 37.74 3.01
2741 6068 9.476202 GAGTATGCAAACATTTTTAGGAAGTTT 57.524 29.630 0.00 0.00 37.74 2.66
2745 6072 7.036220 TGCAAACATTTTTAGGAAGTTTTCGA 58.964 30.769 0.00 0.00 30.68 3.71
2749 6076 8.502161 AACATTTTTAGGAAGTTTTCGAATCG 57.498 30.769 0.00 0.00 0.00 3.34
2750 6077 7.867752 ACATTTTTAGGAAGTTTTCGAATCGA 58.132 30.769 0.00 0.00 0.00 3.59
2752 6079 5.505165 TTTAGGAAGTTTTCGAATCGACG 57.495 39.130 4.25 0.00 34.89 5.12
2762 6089 4.364817 TTCGAATCGACGAACAGTTTTC 57.635 40.909 4.25 0.00 45.21 2.29
2767 6094 7.813700 CGAATCGACGAACAGTTTTCTGAGC 62.814 48.000 0.00 0.00 41.79 4.26
2776 6103 0.881118 GTTTTCTGAGCCGGCAATCA 59.119 50.000 31.54 23.22 0.00 2.57
2780 6107 1.838112 TCTGAGCCGGCAATCATTTT 58.162 45.000 31.54 4.27 0.00 1.82
2781 6108 2.170166 TCTGAGCCGGCAATCATTTTT 58.830 42.857 31.54 3.33 0.00 1.94
2782 6109 2.164219 TCTGAGCCGGCAATCATTTTTC 59.836 45.455 31.54 14.56 0.00 2.29
2784 6111 2.298446 TGAGCCGGCAATCATTTTTCAA 59.702 40.909 31.54 2.10 0.00 2.69
2785 6112 3.244009 TGAGCCGGCAATCATTTTTCAAA 60.244 39.130 31.54 0.00 0.00 2.69
2787 6114 4.325972 AGCCGGCAATCATTTTTCAAAAT 58.674 34.783 31.54 0.00 39.07 1.82
2788 6115 4.761227 AGCCGGCAATCATTTTTCAAAATT 59.239 33.333 31.54 0.00 36.52 1.82
2789 6116 5.241285 AGCCGGCAATCATTTTTCAAAATTT 59.759 32.000 31.54 0.00 36.52 1.82
2790 6117 5.919707 GCCGGCAATCATTTTTCAAAATTTT 59.080 32.000 24.80 0.00 36.52 1.82
2791 6118 6.129141 GCCGGCAATCATTTTTCAAAATTTTG 60.129 34.615 24.80 22.40 36.52 2.44
2794 6121 8.072567 CGGCAATCATTTTTCAAAATTTTGGTA 58.927 29.630 26.45 14.67 36.52 3.25
2857 6416 7.799784 ACATTTTTAGAAAATGCATGAACAGC 58.200 30.769 20.23 0.00 40.35 4.40
2858 6417 7.658575 ACATTTTTAGAAAATGCATGAACAGCT 59.341 29.630 20.23 0.00 40.35 4.24
2899 6462 2.125461 TGACTCAGCGAGCATAATCG 57.875 50.000 5.63 0.00 45.48 3.34
2906 6469 2.408050 AGCGAGCATAATCGATGAACC 58.592 47.619 0.00 0.00 45.56 3.62
2908 6471 2.802816 GCGAGCATAATCGATGAACCTT 59.197 45.455 0.00 0.00 45.56 3.50
2923 6486 5.289083 TGAACCTTTTTGAAATTGGGGAG 57.711 39.130 2.66 0.00 0.00 4.30
2924 6487 3.769739 ACCTTTTTGAAATTGGGGAGC 57.230 42.857 2.66 0.00 0.00 4.70
2928 6491 4.886489 CCTTTTTGAAATTGGGGAGCAAAA 59.114 37.500 0.00 0.00 36.86 2.44
2931 6494 7.230309 CCTTTTTGAAATTGGGGAGCAAAATTA 59.770 33.333 0.00 0.00 37.99 1.40
2937 6500 7.823799 TGAAATTGGGGAGCAAAATTAGAAATC 59.176 33.333 0.00 0.00 0.00 2.17
2938 6501 6.872585 ATTGGGGAGCAAAATTAGAAATCA 57.127 33.333 0.00 0.00 0.00 2.57
3010 6579 5.015515 TCTCCAACATGTTCCAAATATGCA 58.984 37.500 8.48 0.00 33.79 3.96
3014 6583 5.232626 CCAACATGTTCCAAATATGCAATCG 59.767 40.000 8.48 0.00 33.79 3.34
3021 6590 8.994429 TGTTCCAAATATGCAATCGTTATTTT 57.006 26.923 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
126 145 6.893005 AGTCCCCGATGATTTGGTTAAAATAA 59.107 34.615 0.00 0.00 38.64 1.40
199 218 6.710278 CCTTTGTGGGTTTTGGATGATTAAT 58.290 36.000 0.00 0.00 0.00 1.40
230 249 5.520376 AAAGCTGAAAGTGTAAGTGCATT 57.480 34.783 0.00 0.00 35.30 3.56
273 292 8.364142 CCCAAAAGTAGTAAAAATGTTGATCCA 58.636 33.333 0.00 0.00 0.00 3.41
274 293 8.364894 ACCCAAAAGTAGTAAAAATGTTGATCC 58.635 33.333 0.00 0.00 0.00 3.36
282 301 7.907841 AAGACCACCCAAAAGTAGTAAAAAT 57.092 32.000 0.00 0.00 0.00 1.82
291 310 3.699538 GTGAGAAAAGACCACCCAAAAGT 59.300 43.478 0.00 0.00 0.00 2.66
301 320 7.812669 TCAAAACAAAAGAAGTGAGAAAAGACC 59.187 33.333 0.00 0.00 0.00 3.85
310 332 4.698304 ACCGAGTCAAAACAAAAGAAGTGA 59.302 37.500 0.00 0.00 0.00 3.41
311 333 4.981794 ACCGAGTCAAAACAAAAGAAGTG 58.018 39.130 0.00 0.00 0.00 3.16
319 341 3.071479 GGATGCTACCGAGTCAAAACAA 58.929 45.455 0.00 0.00 0.00 2.83
354 376 2.879646 AGTATTTGAACGCGGGTTGAAA 59.120 40.909 26.60 26.60 42.11 2.69
461 1893 5.569059 GCTTTTCGTGGACAATTATGAAGTG 59.431 40.000 0.00 0.00 0.00 3.16
611 2702 0.240411 AACTCTCAGTCGGCGTGTAC 59.760 55.000 6.85 0.00 0.00 2.90
623 2714 3.667497 AATGACAGCTCGAAACTCTCA 57.333 42.857 0.00 0.00 0.00 3.27
657 2748 1.627550 GGCTCGCAAAGGTCGACTTC 61.628 60.000 16.46 0.00 38.85 3.01
677 2768 4.562000 GGAAACTCGTCGGATACTTCTTTC 59.438 45.833 0.00 0.00 0.00 2.62
692 2783 3.931578 AGAAGACAATCTGGGAAACTCG 58.068 45.455 0.00 0.00 0.00 4.18
762 3525 0.387878 CAGCTCGTTCTCGAAGCAGT 60.388 55.000 8.64 0.00 45.61 4.40
824 3587 1.685148 GCTTGCCCATAAAGAGAGGG 58.315 55.000 0.00 0.00 45.68 4.30
840 3603 4.643387 GGCGGTGACTGGTGGCTT 62.643 66.667 0.00 0.00 0.00 4.35
896 3659 3.379445 CGAGTGCCACGGTAGGGT 61.379 66.667 0.00 0.00 0.00 4.34
934 3702 2.684943 TGTGGCGAGGGGATAAAGATA 58.315 47.619 0.00 0.00 0.00 1.98
938 3706 1.353022 AGTTTGTGGCGAGGGGATAAA 59.647 47.619 0.00 0.00 0.00 1.40
946 3714 4.678509 TTATAAAGCAGTTTGTGGCGAG 57.321 40.909 0.00 0.00 34.54 5.03
958 3726 4.272504 GCACGAGGCACTATTTATAAAGCA 59.727 41.667 3.94 0.00 41.55 3.91
1023 3801 6.430925 TCAAAATCTAGTATGCTGCTGTTTGT 59.569 34.615 0.00 0.00 0.00 2.83
1024 3802 6.845302 TCAAAATCTAGTATGCTGCTGTTTG 58.155 36.000 0.00 0.28 0.00 2.93
1055 3833 1.430479 CTGAGCTGAGCTTGTCACAG 58.570 55.000 9.00 7.08 39.88 3.66
1160 3950 4.758251 TGCGTCTCCATGCCGGTG 62.758 66.667 1.90 0.00 32.98 4.94
1161 3951 4.760047 GTGCGTCTCCATGCCGGT 62.760 66.667 1.90 0.00 32.98 5.28
1305 4128 5.812642 TGCTAGTAGTATCAGCAAAAGAAGC 59.187 40.000 6.26 0.00 42.09 3.86
1373 4235 4.254492 CATGCCATCATCCTCAGACTATG 58.746 47.826 0.00 0.00 0.00 2.23
1486 4348 0.911525 ATGCCAGTACCCTGCTGTCT 60.912 55.000 0.00 0.00 37.38 3.41
1534 4399 0.693049 GTCATCCCAGTGTGACCCTT 59.307 55.000 1.77 0.00 38.98 3.95
1575 4440 2.670934 CCAGTGTGACCCTGCTGC 60.671 66.667 0.00 0.00 0.00 5.25
1584 4449 2.954684 GCCGGTCATCCCAGTGTGA 61.955 63.158 1.90 0.00 0.00 3.58
1629 4494 2.268920 CCGGTCATCCCAGTGTGG 59.731 66.667 0.00 0.00 37.25 4.17
1949 4817 6.730619 GTGGAATTTTATTGTATCGTATCGCG 59.269 38.462 0.00 0.00 43.01 5.87
1951 4819 8.078959 TGGTGGAATTTTATTGTATCGTATCG 57.921 34.615 0.00 0.00 0.00 2.92
1954 4822 9.833917 TGTATGGTGGAATTTTATTGTATCGTA 57.166 29.630 0.00 0.00 0.00 3.43
1955 4823 8.740123 TGTATGGTGGAATTTTATTGTATCGT 57.260 30.769 0.00 0.00 0.00 3.73
2105 4980 3.293337 ACAGGGTTTAACCACAGGAAAC 58.707 45.455 16.58 0.00 41.02 2.78
2112 4987 3.371898 GCGTACATACAGGGTTTAACCAC 59.628 47.826 16.58 5.54 41.02 4.16
2123 4999 4.678287 CCATACCGTAAAGCGTACATACAG 59.322 45.833 0.00 0.00 39.32 2.74
2132 5008 1.849097 GAGGACCATACCGTAAAGCG 58.151 55.000 0.00 0.00 40.95 4.68
2137 5013 0.179059 TACGCGAGGACCATACCGTA 60.179 55.000 15.93 0.00 34.73 4.02
2148 5024 1.471684 AGAACTAACCTGTACGCGAGG 59.528 52.381 15.93 12.71 36.57 4.63
2149 5025 2.915738 AGAACTAACCTGTACGCGAG 57.084 50.000 15.93 0.00 0.00 5.03
2150 5026 3.648339 AAAGAACTAACCTGTACGCGA 57.352 42.857 15.93 0.00 0.00 5.87
2151 5027 5.097529 TGATAAAGAACTAACCTGTACGCG 58.902 41.667 3.53 3.53 0.00 6.01
2152 5028 6.956299 TTGATAAAGAACTAACCTGTACGC 57.044 37.500 0.00 0.00 0.00 4.42
2210 5095 9.965824 TTCCTTGAAAAAGAAAAGACATATGAC 57.034 29.630 10.38 2.89 0.00 3.06
2219 5104 4.816385 GGGGCTTTCCTTGAAAAAGAAAAG 59.184 41.667 0.03 0.00 36.09 2.27
2220 5105 4.226168 TGGGGCTTTCCTTGAAAAAGAAAA 59.774 37.500 0.03 0.00 36.09 2.29
2222 5107 3.379452 TGGGGCTTTCCTTGAAAAAGAA 58.621 40.909 0.03 0.00 36.09 2.52
2223 5108 3.039252 TGGGGCTTTCCTTGAAAAAGA 57.961 42.857 0.03 0.00 36.09 2.52
2226 5111 1.977129 CCATGGGGCTTTCCTTGAAAA 59.023 47.619 2.85 0.00 34.88 2.29
2227 5112 1.643310 CCATGGGGCTTTCCTTGAAA 58.357 50.000 2.85 0.00 34.88 2.69
2228 5113 3.379617 CCATGGGGCTTTCCTTGAA 57.620 52.632 2.85 0.00 34.88 2.69
2239 5124 1.606885 AAATGAAGTGCGCCATGGGG 61.607 55.000 23.98 23.98 37.18 4.96
2240 5125 1.102154 TAAATGAAGTGCGCCATGGG 58.898 50.000 15.13 4.77 0.00 4.00
2241 5126 3.441496 AATAAATGAAGTGCGCCATGG 57.559 42.857 7.63 7.63 0.00 3.66
2242 5127 8.572828 TTTAATAATAAATGAAGTGCGCCATG 57.427 30.769 4.18 0.00 0.00 3.66
2245 5130 8.539674 CCTTTTTAATAATAAATGAAGTGCGCC 58.460 33.333 4.18 0.00 31.33 6.53
2246 5131 9.296400 TCCTTTTTAATAATAAATGAAGTGCGC 57.704 29.630 0.00 0.00 31.33 6.09
2265 5150 9.696917 GATGTTTTCAATGATGTAGTCCTTTTT 57.303 29.630 0.00 0.00 0.00 1.94
2266 5151 8.859090 TGATGTTTTCAATGATGTAGTCCTTTT 58.141 29.630 0.00 0.00 0.00 2.27
2267 5152 8.299570 GTGATGTTTTCAATGATGTAGTCCTTT 58.700 33.333 0.00 0.00 35.70 3.11
2268 5153 7.667219 AGTGATGTTTTCAATGATGTAGTCCTT 59.333 33.333 0.00 0.00 35.70 3.36
2269 5154 7.170965 AGTGATGTTTTCAATGATGTAGTCCT 58.829 34.615 0.00 0.00 35.70 3.85
2270 5155 7.383102 AGTGATGTTTTCAATGATGTAGTCC 57.617 36.000 0.00 0.00 35.70 3.85
2271 5156 8.725148 AGAAGTGATGTTTTCAATGATGTAGTC 58.275 33.333 0.00 0.00 35.70 2.59
2272 5157 8.627208 AGAAGTGATGTTTTCAATGATGTAGT 57.373 30.769 0.00 0.00 35.70 2.73
2283 5168 9.543018 CCGAGTTTTATTAGAAGTGATGTTTTC 57.457 33.333 0.00 0.00 0.00 2.29
2285 5170 7.881232 TCCCGAGTTTTATTAGAAGTGATGTTT 59.119 33.333 0.00 0.00 0.00 2.83
2286 5171 7.391620 TCCCGAGTTTTATTAGAAGTGATGTT 58.608 34.615 0.00 0.00 0.00 2.71
2287 5172 6.942976 TCCCGAGTTTTATTAGAAGTGATGT 58.057 36.000 0.00 0.00 0.00 3.06
2288 5173 7.042335 ACTCCCGAGTTTTATTAGAAGTGATG 58.958 38.462 0.00 0.00 38.83 3.07
2289 5174 7.184067 ACTCCCGAGTTTTATTAGAAGTGAT 57.816 36.000 0.00 0.00 38.83 3.06
2290 5175 6.600882 ACTCCCGAGTTTTATTAGAAGTGA 57.399 37.500 0.00 0.00 38.83 3.41
2291 5176 8.195436 TGATACTCCCGAGTTTTATTAGAAGTG 58.805 37.037 2.08 0.00 42.54 3.16
2292 5177 8.196103 GTGATACTCCCGAGTTTTATTAGAAGT 58.804 37.037 2.08 0.00 42.54 3.01
2293 5178 7.652507 GGTGATACTCCCGAGTTTTATTAGAAG 59.347 40.741 2.08 0.00 42.54 2.85
2295 5180 6.041296 GGGTGATACTCCCGAGTTTTATTAGA 59.959 42.308 2.08 0.00 42.54 2.10
2296 5181 6.221659 GGGTGATACTCCCGAGTTTTATTAG 58.778 44.000 2.08 0.00 42.54 1.73
2298 5183 5.032327 GGGTGATACTCCCGAGTTTTATT 57.968 43.478 2.08 0.00 42.54 1.40
2310 5195 4.302559 AGTTTTTGGGAGGGTGATACTC 57.697 45.455 0.00 0.00 0.00 2.59
2311 5196 5.491078 TCATAGTTTTTGGGAGGGTGATACT 59.509 40.000 0.00 0.00 0.00 2.12
2312 5197 5.751586 TCATAGTTTTTGGGAGGGTGATAC 58.248 41.667 0.00 0.00 0.00 2.24
2313 5198 6.395780 TTCATAGTTTTTGGGAGGGTGATA 57.604 37.500 0.00 0.00 0.00 2.15
2314 5199 4.946160 TCATAGTTTTTGGGAGGGTGAT 57.054 40.909 0.00 0.00 0.00 3.06
2315 5200 4.733077 TTCATAGTTTTTGGGAGGGTGA 57.267 40.909 0.00 0.00 0.00 4.02
2316 5201 6.014669 TCAAATTCATAGTTTTTGGGAGGGTG 60.015 38.462 0.00 0.00 32.52 4.61
2317 5202 6.081356 TCAAATTCATAGTTTTTGGGAGGGT 58.919 36.000 0.00 0.00 32.52 4.34
2320 5205 9.709495 TTGATTCAAATTCATAGTTTTTGGGAG 57.291 29.630 0.00 0.00 32.52 4.30
2333 5218 9.740239 GCTAGATATGCTTTTGATTCAAATTCA 57.260 29.630 12.39 12.72 33.19 2.57
2334 5219 9.740239 TGCTAGATATGCTTTTGATTCAAATTC 57.260 29.630 12.39 8.07 33.19 2.17
2339 5224 8.687292 AGATTGCTAGATATGCTTTTGATTCA 57.313 30.769 0.00 0.00 0.00 2.57
2343 5228 7.680350 GCACAAGATTGCTAGATATGCTTTTGA 60.680 37.037 0.00 0.00 39.59 2.69
2344 5229 6.417044 GCACAAGATTGCTAGATATGCTTTTG 59.583 38.462 0.00 0.00 39.59 2.44
2345 5230 6.501781 GCACAAGATTGCTAGATATGCTTTT 58.498 36.000 0.00 0.00 39.59 2.27
2346 5231 5.277683 CGCACAAGATTGCTAGATATGCTTT 60.278 40.000 0.00 0.00 40.62 3.51
2347 5232 4.212847 CGCACAAGATTGCTAGATATGCTT 59.787 41.667 0.00 0.00 40.62 3.91
2350 5235 3.120408 GGCGCACAAGATTGCTAGATATG 60.120 47.826 10.83 0.00 40.62 1.78
2352 5237 2.158971 TGGCGCACAAGATTGCTAGATA 60.159 45.455 10.83 0.00 40.62 1.98
2353 5238 1.303309 GGCGCACAAGATTGCTAGAT 58.697 50.000 10.83 0.00 40.62 1.98
2355 5240 0.097674 GTGGCGCACAAGATTGCTAG 59.902 55.000 10.83 0.00 40.62 3.42
2356 5241 1.305219 GGTGGCGCACAAGATTGCTA 61.305 55.000 10.83 0.00 40.62 3.49
2357 5242 2.629656 GGTGGCGCACAAGATTGCT 61.630 57.895 10.83 0.00 40.62 3.91
2358 5243 2.126346 GGTGGCGCACAAGATTGC 60.126 61.111 10.83 0.00 39.28 3.56
2362 5247 2.130821 TAATGGGGTGGCGCACAAGA 62.131 55.000 10.83 0.00 35.86 3.02
2363 5248 1.656818 CTAATGGGGTGGCGCACAAG 61.657 60.000 10.83 0.00 35.86 3.16
2364 5249 1.677300 CTAATGGGGTGGCGCACAA 60.677 57.895 10.83 0.00 35.86 3.33
2365 5250 2.045438 CTAATGGGGTGGCGCACA 60.045 61.111 10.83 1.22 35.86 4.57
2366 5251 3.518068 GCTAATGGGGTGGCGCAC 61.518 66.667 10.83 5.50 0.00 5.34
2367 5252 3.280938 AAGCTAATGGGGTGGCGCA 62.281 57.895 10.83 0.00 0.00 6.09
2369 5254 1.823899 GGAAGCTAATGGGGTGGCG 60.824 63.158 0.00 0.00 0.00 5.69
2370 5255 1.823899 CGGAAGCTAATGGGGTGGC 60.824 63.158 0.00 0.00 0.00 5.01
2371 5256 0.834612 TACGGAAGCTAATGGGGTGG 59.165 55.000 0.00 0.00 0.00 4.61
2372 5257 1.760613 TCTACGGAAGCTAATGGGGTG 59.239 52.381 0.00 0.00 0.00 4.61
2373 5258 2.169978 GTTCTACGGAAGCTAATGGGGT 59.830 50.000 0.00 0.00 31.46 4.95
2374 5259 2.169769 TGTTCTACGGAAGCTAATGGGG 59.830 50.000 0.00 0.00 31.46 4.96
2376 5261 5.116180 TCATTGTTCTACGGAAGCTAATGG 58.884 41.667 0.00 0.00 33.78 3.16
2377 5262 6.662414 TTCATTGTTCTACGGAAGCTAATG 57.338 37.500 0.00 0.00 34.00 1.90
2379 5264 7.279313 GGTTATTCATTGTTCTACGGAAGCTAA 59.721 37.037 0.00 0.00 31.46 3.09
2380 5265 6.759827 GGTTATTCATTGTTCTACGGAAGCTA 59.240 38.462 0.00 0.00 31.46 3.32
2381 5266 5.585047 GGTTATTCATTGTTCTACGGAAGCT 59.415 40.000 0.00 0.00 31.46 3.74
2383 5268 7.333423 TCAAGGTTATTCATTGTTCTACGGAAG 59.667 37.037 0.00 0.00 38.70 3.46
2384 5269 7.162761 TCAAGGTTATTCATTGTTCTACGGAA 58.837 34.615 0.00 0.00 38.70 4.30
2386 5271 6.978343 TCAAGGTTATTCATTGTTCTACGG 57.022 37.500 0.00 0.00 38.70 4.02
2387 5272 9.529325 TCTATCAAGGTTATTCATTGTTCTACG 57.471 33.333 0.00 0.00 38.70 3.51
2389 5274 9.547753 GCTCTATCAAGGTTATTCATTGTTCTA 57.452 33.333 0.00 0.00 38.70 2.10
2393 5278 6.662755 TGGCTCTATCAAGGTTATTCATTGT 58.337 36.000 0.00 0.00 38.70 2.71
2396 5281 5.709164 GCATGGCTCTATCAAGGTTATTCAT 59.291 40.000 0.00 0.00 0.00 2.57
2403 5288 1.842562 AGTGCATGGCTCTATCAAGGT 59.157 47.619 0.00 0.00 30.33 3.50
2404 5289 2.617308 CAAGTGCATGGCTCTATCAAGG 59.383 50.000 0.00 0.00 31.92 3.61
2406 5291 2.239402 TCCAAGTGCATGGCTCTATCAA 59.761 45.455 1.12 0.00 40.46 2.57
2407 5292 1.839354 TCCAAGTGCATGGCTCTATCA 59.161 47.619 1.12 0.00 40.46 2.15
2408 5293 2.627515 TCCAAGTGCATGGCTCTATC 57.372 50.000 1.12 0.00 40.46 2.08
2410 5295 3.370840 AATTCCAAGTGCATGGCTCTA 57.629 42.857 1.12 0.00 40.46 2.43
2411 5296 2.226962 AATTCCAAGTGCATGGCTCT 57.773 45.000 1.12 0.00 40.46 4.09
2412 5297 2.028748 ACAAATTCCAAGTGCATGGCTC 60.029 45.455 1.12 0.00 40.46 4.70
2413 5298 1.972795 ACAAATTCCAAGTGCATGGCT 59.027 42.857 1.12 0.00 40.46 4.75
2415 5300 2.299582 TCCACAAATTCCAAGTGCATGG 59.700 45.455 0.00 0.00 42.12 3.66
2416 5301 3.663995 TCCACAAATTCCAAGTGCATG 57.336 42.857 0.00 0.00 32.09 4.06
2418 5303 3.196469 TGTTTCCACAAATTCCAAGTGCA 59.804 39.130 0.00 0.00 32.09 4.57
2419 5304 3.791245 TGTTTCCACAAATTCCAAGTGC 58.209 40.909 0.00 0.00 32.09 4.40
2420 5305 6.529463 GAATGTTTCCACAAATTCCAAGTG 57.471 37.500 0.00 0.00 36.16 3.16
2435 5320 5.528690 TGCTGCTATACTGATGGAATGTTTC 59.471 40.000 0.00 0.00 0.00 2.78
2436 5321 5.439721 TGCTGCTATACTGATGGAATGTTT 58.560 37.500 0.00 0.00 0.00 2.83
2437 5322 5.039920 TGCTGCTATACTGATGGAATGTT 57.960 39.130 0.00 0.00 0.00 2.71
2438 5323 4.694760 TGCTGCTATACTGATGGAATGT 57.305 40.909 0.00 0.00 0.00 2.71
2439 5324 6.260271 CCATATGCTGCTATACTGATGGAATG 59.740 42.308 0.00 0.00 0.00 2.67
2440 5325 6.157471 TCCATATGCTGCTATACTGATGGAAT 59.843 38.462 0.00 0.00 32.27 3.01
2441 5326 5.484998 TCCATATGCTGCTATACTGATGGAA 59.515 40.000 0.00 0.00 32.27 3.53
2442 5327 5.025453 TCCATATGCTGCTATACTGATGGA 58.975 41.667 0.00 5.86 32.71 3.41
2443 5328 5.114780 GTCCATATGCTGCTATACTGATGG 58.885 45.833 0.00 3.79 0.00 3.51
2444 5329 5.105023 AGGTCCATATGCTGCTATACTGATG 60.105 44.000 0.00 0.00 0.00 3.07
2445 5330 5.028802 AGGTCCATATGCTGCTATACTGAT 58.971 41.667 0.00 0.00 0.00 2.90
2446 5331 4.420206 AGGTCCATATGCTGCTATACTGA 58.580 43.478 0.00 0.00 0.00 3.41
2447 5332 4.815533 AGGTCCATATGCTGCTATACTG 57.184 45.455 0.00 0.00 0.00 2.74
2448 5333 4.404073 GCTAGGTCCATATGCTGCTATACT 59.596 45.833 0.00 0.00 0.00 2.12
2449 5334 4.160439 TGCTAGGTCCATATGCTGCTATAC 59.840 45.833 0.00 0.00 0.00 1.47
2450 5335 4.160439 GTGCTAGGTCCATATGCTGCTATA 59.840 45.833 0.00 0.00 0.00 1.31
2451 5336 3.055530 GTGCTAGGTCCATATGCTGCTAT 60.056 47.826 0.00 0.00 0.00 2.97
2452 5337 2.300152 GTGCTAGGTCCATATGCTGCTA 59.700 50.000 0.00 0.00 0.00 3.49
2453 5338 1.071385 GTGCTAGGTCCATATGCTGCT 59.929 52.381 0.00 0.00 0.00 4.24
2454 5339 1.517242 GTGCTAGGTCCATATGCTGC 58.483 55.000 0.00 0.00 0.00 5.25
2455 5340 1.696336 AGGTGCTAGGTCCATATGCTG 59.304 52.381 0.00 0.00 0.00 4.41
2456 5341 1.974236 GAGGTGCTAGGTCCATATGCT 59.026 52.381 0.00 0.00 0.00 3.79
2457 5342 1.974236 AGAGGTGCTAGGTCCATATGC 59.026 52.381 0.00 0.00 0.00 3.14
2458 5343 2.968574 ACAGAGGTGCTAGGTCCATATG 59.031 50.000 0.00 0.00 0.00 1.78
2459 5344 3.116939 AGACAGAGGTGCTAGGTCCATAT 60.117 47.826 0.00 0.00 0.00 1.78
2460 5345 2.245028 AGACAGAGGTGCTAGGTCCATA 59.755 50.000 0.00 0.00 0.00 2.74
2461 5346 1.007721 AGACAGAGGTGCTAGGTCCAT 59.992 52.381 0.00 0.00 0.00 3.41
2462 5347 0.409876 AGACAGAGGTGCTAGGTCCA 59.590 55.000 0.00 0.00 0.00 4.02
2463 5348 1.107945 GAGACAGAGGTGCTAGGTCC 58.892 60.000 0.00 0.00 0.00 4.46
2464 5349 1.474879 GTGAGACAGAGGTGCTAGGTC 59.525 57.143 0.00 0.00 0.00 3.85
2465 5350 1.551452 GTGAGACAGAGGTGCTAGGT 58.449 55.000 0.00 0.00 0.00 3.08
2466 5351 0.820871 GGTGAGACAGAGGTGCTAGG 59.179 60.000 0.00 0.00 0.00 3.02
2467 5352 1.550327 TGGTGAGACAGAGGTGCTAG 58.450 55.000 0.00 0.00 0.00 3.42
2468 5353 2.238084 ATGGTGAGACAGAGGTGCTA 57.762 50.000 0.00 0.00 0.00 3.49
2469 5354 1.356124 AATGGTGAGACAGAGGTGCT 58.644 50.000 0.00 0.00 0.00 4.40
2470 5355 2.028112 TGTAATGGTGAGACAGAGGTGC 60.028 50.000 0.00 0.00 0.00 5.01
2471 5356 3.961480 TGTAATGGTGAGACAGAGGTG 57.039 47.619 0.00 0.00 0.00 4.00
2472 5357 5.273208 AGTATGTAATGGTGAGACAGAGGT 58.727 41.667 0.00 0.00 0.00 3.85
2473 5358 5.860941 AGTATGTAATGGTGAGACAGAGG 57.139 43.478 0.00 0.00 0.00 3.69
2474 5359 6.867550 TGAAGTATGTAATGGTGAGACAGAG 58.132 40.000 0.00 0.00 0.00 3.35
2475 5360 6.628175 GCTGAAGTATGTAATGGTGAGACAGA 60.628 42.308 0.00 0.00 0.00 3.41
2476 5361 5.521735 GCTGAAGTATGTAATGGTGAGACAG 59.478 44.000 0.00 0.00 0.00 3.51
2477 5362 5.046663 TGCTGAAGTATGTAATGGTGAGACA 60.047 40.000 0.00 0.00 0.00 3.41
2478 5363 5.419542 TGCTGAAGTATGTAATGGTGAGAC 58.580 41.667 0.00 0.00 0.00 3.36
2479 5364 5.675684 TGCTGAAGTATGTAATGGTGAGA 57.324 39.130 0.00 0.00 0.00 3.27
2480 5365 6.539826 TGATTGCTGAAGTATGTAATGGTGAG 59.460 38.462 0.00 0.00 0.00 3.51
2481 5366 6.316140 GTGATTGCTGAAGTATGTAATGGTGA 59.684 38.462 0.00 0.00 0.00 4.02
2482 5367 6.458751 GGTGATTGCTGAAGTATGTAATGGTG 60.459 42.308 0.00 0.00 0.00 4.17
2483 5368 5.590259 GGTGATTGCTGAAGTATGTAATGGT 59.410 40.000 0.00 0.00 0.00 3.55
2484 5369 5.589855 TGGTGATTGCTGAAGTATGTAATGG 59.410 40.000 0.00 0.00 0.00 3.16
2485 5370 6.238566 CCTGGTGATTGCTGAAGTATGTAATG 60.239 42.308 0.00 0.00 0.00 1.90
2486 5371 5.824624 CCTGGTGATTGCTGAAGTATGTAAT 59.175 40.000 0.00 0.00 0.00 1.89
2487 5372 5.185454 CCTGGTGATTGCTGAAGTATGTAA 58.815 41.667 0.00 0.00 0.00 2.41
2488 5373 4.769688 CCTGGTGATTGCTGAAGTATGTA 58.230 43.478 0.00 0.00 0.00 2.29
2489 5374 3.614092 CCTGGTGATTGCTGAAGTATGT 58.386 45.455 0.00 0.00 0.00 2.29
2490 5375 2.357009 GCCTGGTGATTGCTGAAGTATG 59.643 50.000 0.00 0.00 0.00 2.39
2491 5376 2.648059 GCCTGGTGATTGCTGAAGTAT 58.352 47.619 0.00 0.00 0.00 2.12
2492 5377 1.340017 GGCCTGGTGATTGCTGAAGTA 60.340 52.381 0.00 0.00 0.00 2.24
2493 5378 0.610232 GGCCTGGTGATTGCTGAAGT 60.610 55.000 0.00 0.00 0.00 3.01
2494 5379 1.651240 CGGCCTGGTGATTGCTGAAG 61.651 60.000 0.00 0.00 33.12 3.02
2495 5380 1.675310 CGGCCTGGTGATTGCTGAA 60.675 57.895 0.00 0.00 33.12 3.02
2496 5381 2.046023 CGGCCTGGTGATTGCTGA 60.046 61.111 0.00 0.00 33.12 4.26
2497 5382 3.136123 CCGGCCTGGTGATTGCTG 61.136 66.667 0.00 0.00 0.00 4.41
2506 5391 1.184970 AATTGAAACCACCGGCCTGG 61.185 55.000 9.48 9.48 46.41 4.45
2507 5392 0.678950 AAATTGAAACCACCGGCCTG 59.321 50.000 0.00 0.00 0.00 4.85
2508 5393 1.343142 GAAAATTGAAACCACCGGCCT 59.657 47.619 0.00 0.00 0.00 5.19
2509 5394 1.606994 GGAAAATTGAAACCACCGGCC 60.607 52.381 0.00 0.00 0.00 6.13
2510 5395 1.606994 GGGAAAATTGAAACCACCGGC 60.607 52.381 0.00 0.00 0.00 6.13
2511 5396 1.001520 GGGGAAAATTGAAACCACCGG 59.998 52.381 0.00 0.00 0.00 5.28
2512 5397 1.967779 AGGGGAAAATTGAAACCACCG 59.032 47.619 0.00 0.00 0.00 4.94
2513 5398 4.431416 AAAGGGGAAAATTGAAACCACC 57.569 40.909 0.00 0.00 0.00 4.61
2514 5399 5.432645 TGAAAAGGGGAAAATTGAAACCAC 58.567 37.500 0.00 0.00 0.00 4.16
2515 5400 5.700402 TGAAAAGGGGAAAATTGAAACCA 57.300 34.783 0.00 0.00 0.00 3.67
2516 5401 7.581213 AAATGAAAAGGGGAAAATTGAAACC 57.419 32.000 0.00 0.00 0.00 3.27
2517 5402 7.855409 CGAAAATGAAAAGGGGAAAATTGAAAC 59.145 33.333 0.00 0.00 0.00 2.78
2518 5403 7.554476 ACGAAAATGAAAAGGGGAAAATTGAAA 59.446 29.630 0.00 0.00 0.00 2.69
2519 5404 7.051000 ACGAAAATGAAAAGGGGAAAATTGAA 58.949 30.769 0.00 0.00 0.00 2.69
2520 5405 6.587273 ACGAAAATGAAAAGGGGAAAATTGA 58.413 32.000 0.00 0.00 0.00 2.57
2521 5406 6.859420 ACGAAAATGAAAAGGGGAAAATTG 57.141 33.333 0.00 0.00 0.00 2.32
2522 5407 7.873719 AAACGAAAATGAAAAGGGGAAAATT 57.126 28.000 0.00 0.00 0.00 1.82
2523 5408 7.873719 AAAACGAAAATGAAAAGGGGAAAAT 57.126 28.000 0.00 0.00 0.00 1.82
2524 5409 8.831550 CATAAAACGAAAATGAAAAGGGGAAAA 58.168 29.630 0.00 0.00 0.00 2.29
2525 5410 8.204836 TCATAAAACGAAAATGAAAAGGGGAAA 58.795 29.630 0.00 0.00 0.00 3.13
2526 5411 7.727181 TCATAAAACGAAAATGAAAAGGGGAA 58.273 30.769 0.00 0.00 0.00 3.97
2527 5412 7.291411 TCATAAAACGAAAATGAAAAGGGGA 57.709 32.000 0.00 0.00 0.00 4.81
2528 5413 7.655732 AGTTCATAAAACGAAAATGAAAAGGGG 59.344 33.333 0.00 0.00 40.32 4.79
2529 5414 8.587952 AGTTCATAAAACGAAAATGAAAAGGG 57.412 30.769 0.00 0.00 40.32 3.95
2549 5434 9.273016 AGTATTCGAGAATTTGAAAGAAGTTCA 57.727 29.630 5.50 0.00 37.06 3.18
2551 5436 9.884465 CAAGTATTCGAGAATTTGAAAGAAGTT 57.116 29.630 3.49 0.00 30.61 2.66
2552 5437 8.017946 GCAAGTATTCGAGAATTTGAAAGAAGT 58.982 33.333 12.05 0.00 30.61 3.01
2553 5438 8.233190 AGCAAGTATTCGAGAATTTGAAAGAAG 58.767 33.333 12.05 0.00 30.61 2.85
2554 5439 8.017373 CAGCAAGTATTCGAGAATTTGAAAGAA 58.983 33.333 12.05 0.00 30.61 2.52
2555 5440 7.387673 TCAGCAAGTATTCGAGAATTTGAAAGA 59.612 33.333 12.05 5.61 30.61 2.52
2556 5441 7.521529 TCAGCAAGTATTCGAGAATTTGAAAG 58.478 34.615 12.05 4.01 30.61 2.62
2557 5442 7.433708 TCAGCAAGTATTCGAGAATTTGAAA 57.566 32.000 12.05 0.00 30.61 2.69
2558 5443 7.433708 TTCAGCAAGTATTCGAGAATTTGAA 57.566 32.000 12.05 7.44 32.50 2.69
2559 5444 7.433708 TTTCAGCAAGTATTCGAGAATTTGA 57.566 32.000 12.05 3.28 32.50 2.69
2560 5445 7.964559 TGATTTCAGCAAGTATTCGAGAATTTG 59.035 33.333 3.49 5.04 32.50 2.32
2561 5446 8.044060 TGATTTCAGCAAGTATTCGAGAATTT 57.956 30.769 3.49 0.00 32.50 1.82
2562 5447 7.615582 TGATTTCAGCAAGTATTCGAGAATT 57.384 32.000 3.49 0.00 32.50 2.17
2563 5448 7.496920 TCATGATTTCAGCAAGTATTCGAGAAT 59.503 33.333 3.67 3.67 34.93 2.40
2564 5449 6.818142 TCATGATTTCAGCAAGTATTCGAGAA 59.182 34.615 0.00 0.00 0.00 2.87
2565 5450 6.340522 TCATGATTTCAGCAAGTATTCGAGA 58.659 36.000 0.00 0.00 0.00 4.04
2566 5451 6.594284 TCATGATTTCAGCAAGTATTCGAG 57.406 37.500 0.00 0.00 0.00 4.04
2567 5452 5.007039 GCTCATGATTTCAGCAAGTATTCGA 59.993 40.000 0.00 0.00 0.00 3.71
2568 5453 5.203370 GCTCATGATTTCAGCAAGTATTCG 58.797 41.667 0.00 0.00 0.00 3.34
2569 5454 6.127810 TGCTCATGATTTCAGCAAGTATTC 57.872 37.500 4.24 0.00 32.17 1.75
2570 5455 6.710597 ATGCTCATGATTTCAGCAAGTATT 57.289 33.333 10.23 0.00 39.04 1.89
2571 5456 6.710597 AATGCTCATGATTTCAGCAAGTAT 57.289 33.333 10.23 0.00 39.04 2.12
2572 5457 6.519679 AAATGCTCATGATTTCAGCAAGTA 57.480 33.333 10.23 0.00 39.04 2.24
2573 5458 5.401531 AAATGCTCATGATTTCAGCAAGT 57.598 34.783 10.23 0.32 39.04 3.16
2574 5459 6.534059 CAAAAATGCTCATGATTTCAGCAAG 58.466 36.000 10.23 0.00 39.04 4.01
2575 5460 5.106869 GCAAAAATGCTCATGATTTCAGCAA 60.107 36.000 10.23 0.00 39.04 3.91
2576 5461 4.390603 GCAAAAATGCTCATGATTTCAGCA 59.609 37.500 8.79 8.79 39.91 4.41
2577 5462 4.390603 TGCAAAAATGCTCATGATTTCAGC 59.609 37.500 0.00 3.33 35.49 4.26
2578 5463 6.474819 TTGCAAAAATGCTCATGATTTCAG 57.525 33.333 0.00 0.00 35.49 3.02
2579 5464 7.173390 TGAATTGCAAAAATGCTCATGATTTCA 59.827 29.630 1.71 0.45 35.49 2.69
2580 5465 7.523219 TGAATTGCAAAAATGCTCATGATTTC 58.477 30.769 1.71 0.00 35.49 2.17
2581 5466 7.441890 TGAATTGCAAAAATGCTCATGATTT 57.558 28.000 1.71 0.00 35.49 2.17
2582 5467 7.335673 TCATGAATTGCAAAAATGCTCATGATT 59.664 29.630 20.80 4.07 43.08 2.57
2583 5468 6.821160 TCATGAATTGCAAAAATGCTCATGAT 59.179 30.769 20.80 1.72 43.08 2.45
2584 5469 6.166982 TCATGAATTGCAAAAATGCTCATGA 58.833 32.000 20.80 20.80 44.36 3.07
2585 5470 6.415798 TCATGAATTGCAAAAATGCTCATG 57.584 33.333 18.11 18.11 41.89 3.07
2586 5471 7.624360 ATTCATGAATTGCAAAAATGCTCAT 57.376 28.000 15.36 2.75 35.49 2.90
2587 5472 8.725405 ATATTCATGAATTGCAAAAATGCTCA 57.275 26.923 25.26 3.41 32.56 4.26
2637 5522 9.931710 CGGTGTTCGAAAAATGTTTATTATTTC 57.068 29.630 0.00 0.00 42.43 2.17
2638 5523 8.917655 CCGGTGTTCGAAAAATGTTTATTATTT 58.082 29.630 0.00 0.00 42.43 1.40
2639 5524 8.298140 TCCGGTGTTCGAAAAATGTTTATTATT 58.702 29.630 0.00 0.00 42.43 1.40
2640 5525 7.751793 GTCCGGTGTTCGAAAAATGTTTATTAT 59.248 33.333 0.00 0.00 42.43 1.28
2641 5526 7.076983 GTCCGGTGTTCGAAAAATGTTTATTA 58.923 34.615 0.00 0.00 42.43 0.98
2642 5527 5.916320 GTCCGGTGTTCGAAAAATGTTTATT 59.084 36.000 0.00 0.00 42.43 1.40
2643 5528 5.008811 TGTCCGGTGTTCGAAAAATGTTTAT 59.991 36.000 0.00 0.00 42.43 1.40
2644 5529 4.334759 TGTCCGGTGTTCGAAAAATGTTTA 59.665 37.500 0.00 0.00 42.43 2.01
2645 5530 3.128938 TGTCCGGTGTTCGAAAAATGTTT 59.871 39.130 0.00 0.00 42.43 2.83
2646 5531 2.683867 TGTCCGGTGTTCGAAAAATGTT 59.316 40.909 0.00 0.00 42.43 2.71
2647 5532 2.290464 TGTCCGGTGTTCGAAAAATGT 58.710 42.857 0.00 0.00 42.43 2.71
2648 5533 3.552604 ATGTCCGGTGTTCGAAAAATG 57.447 42.857 0.00 0.00 42.43 2.32
2649 5534 4.577834 AAATGTCCGGTGTTCGAAAAAT 57.422 36.364 0.00 0.00 42.43 1.82
2650 5535 4.373348 AAAATGTCCGGTGTTCGAAAAA 57.627 36.364 0.00 0.00 42.43 1.94
2651 5536 4.373348 AAAAATGTCCGGTGTTCGAAAA 57.627 36.364 0.00 0.00 42.43 2.29
2676 5561 2.104111 TCAGAAAAAGCTCGGGACTTCA 59.896 45.455 0.00 0.00 0.00 3.02
2678 5563 2.930826 TCAGAAAAAGCTCGGGACTT 57.069 45.000 0.00 0.00 0.00 3.01
2679 5564 2.930826 TTCAGAAAAAGCTCGGGACT 57.069 45.000 0.00 0.00 0.00 3.85
2680 5565 4.229876 CAATTTCAGAAAAAGCTCGGGAC 58.770 43.478 0.00 0.00 0.00 4.46
2681 5566 3.888930 ACAATTTCAGAAAAAGCTCGGGA 59.111 39.130 0.00 0.00 0.00 5.14
2682 5567 3.983344 CACAATTTCAGAAAAAGCTCGGG 59.017 43.478 0.00 0.00 0.00 5.14
2683 5568 4.858935 TCACAATTTCAGAAAAAGCTCGG 58.141 39.130 0.00 0.00 0.00 4.63
2684 5569 6.810888 TTTCACAATTTCAGAAAAAGCTCG 57.189 33.333 0.00 0.00 0.00 5.03
2713 5598 9.515226 ACTTCCTAAAAATGTTTGCATACTCTA 57.485 29.630 8.78 0.00 34.39 2.43
2714 5599 8.409358 ACTTCCTAAAAATGTTTGCATACTCT 57.591 30.769 8.78 0.00 34.39 3.24
2716 5601 9.830975 AAAACTTCCTAAAAATGTTTGCATACT 57.169 25.926 8.78 0.00 34.39 2.12
2718 5603 8.973378 CGAAAACTTCCTAAAAATGTTTGCATA 58.027 29.630 0.00 0.00 34.39 3.14
2720 5605 7.036220 TCGAAAACTTCCTAAAAATGTTTGCA 58.964 30.769 0.00 0.00 32.20 4.08
2721 5606 7.458038 TCGAAAACTTCCTAAAAATGTTTGC 57.542 32.000 0.00 0.00 32.20 3.68
2723 5608 8.964150 CGATTCGAAAACTTCCTAAAAATGTTT 58.036 29.630 0.00 0.00 33.04 2.83
2725 5610 7.801783 GTCGATTCGAAAACTTCCTAAAAATGT 59.198 33.333 10.87 0.00 37.72 2.71
2727 5612 7.013529 CGTCGATTCGAAAACTTCCTAAAAAT 58.986 34.615 10.87 0.00 37.72 1.82
2728 5613 6.200665 TCGTCGATTCGAAAACTTCCTAAAAA 59.799 34.615 10.87 0.00 37.72 1.94
2729 5614 5.691305 TCGTCGATTCGAAAACTTCCTAAAA 59.309 36.000 10.87 0.00 37.72 1.52
2730 5615 5.221880 TCGTCGATTCGAAAACTTCCTAAA 58.778 37.500 10.87 0.00 37.72 1.85
2731 5616 4.797471 TCGTCGATTCGAAAACTTCCTAA 58.203 39.130 10.87 0.00 37.72 2.69
2733 5618 3.293311 TCGTCGATTCGAAAACTTCCT 57.707 42.857 10.87 0.00 37.72 3.36
2741 6068 4.046462 AGAAAACTGTTCGTCGATTCGAA 58.954 39.130 10.87 0.00 45.46 3.71
2745 6072 3.184581 GCTCAGAAAACTGTTCGTCGATT 59.815 43.478 0.00 0.00 0.00 3.34
2749 6076 1.192534 CGGCTCAGAAAACTGTTCGTC 59.807 52.381 0.00 0.00 0.00 4.20
2750 6077 1.217882 CGGCTCAGAAAACTGTTCGT 58.782 50.000 0.00 0.00 0.00 3.85
2752 6079 0.238553 GCCGGCTCAGAAAACTGTTC 59.761 55.000 22.15 0.00 0.00 3.18
2754 6081 0.465460 TTGCCGGCTCAGAAAACTGT 60.465 50.000 29.70 0.00 0.00 3.55
2755 6082 0.883833 ATTGCCGGCTCAGAAAACTG 59.116 50.000 29.70 0.00 0.00 3.16
2756 6083 1.168714 GATTGCCGGCTCAGAAAACT 58.831 50.000 29.70 0.00 0.00 2.66
2757 6084 0.881118 TGATTGCCGGCTCAGAAAAC 59.119 50.000 29.70 12.29 0.00 2.43
2762 6089 2.094597 TGAAAAATGATTGCCGGCTCAG 60.095 45.455 29.70 0.00 0.00 3.35
2767 6094 6.362820 CCAAAATTTTGAAAAATGATTGCCGG 59.637 34.615 28.44 0.00 40.55 6.13
2768 6095 6.916932 ACCAAAATTTTGAAAAATGATTGCCG 59.083 30.769 28.44 11.30 40.55 5.69
2829 6388 9.322773 TGTTCATGCATTTTCTAAAAATGTTCA 57.677 25.926 20.33 13.77 39.25 3.18
2845 6404 5.543714 TGAATTCAAAAGCTGTTCATGCAT 58.456 33.333 5.45 0.00 0.00 3.96
2846 6405 4.946445 TGAATTCAAAAGCTGTTCATGCA 58.054 34.783 5.45 0.00 0.00 3.96
2887 6446 2.408050 AGGTTCATCGATTATGCTCGC 58.592 47.619 0.00 0.00 38.52 5.03
2890 6449 6.757897 TCAAAAAGGTTCATCGATTATGCT 57.242 33.333 0.00 0.00 35.38 3.79
2891 6450 7.810766 TTTCAAAAAGGTTCATCGATTATGC 57.189 32.000 0.00 0.00 35.38 3.14
2899 6462 5.863965 TCCCCAATTTCAAAAAGGTTCATC 58.136 37.500 0.00 0.00 0.00 2.92
2906 6469 6.638096 ATTTTGCTCCCCAATTTCAAAAAG 57.362 33.333 0.00 0.00 39.21 2.27
2908 6471 7.512992 TCTAATTTTGCTCCCCAATTTCAAAA 58.487 30.769 0.00 0.00 39.80 2.44
2983 6552 7.550196 GCATATTTGGAACATGTTGGAGAATTT 59.450 33.333 17.58 3.77 39.30 1.82
2988 6557 5.327616 TGCATATTTGGAACATGTTGGAG 57.672 39.130 17.58 0.00 39.30 3.86
2990 6559 5.232626 CGATTGCATATTTGGAACATGTTGG 59.767 40.000 17.58 0.00 39.30 3.77
2991 6560 5.806502 ACGATTGCATATTTGGAACATGTTG 59.193 36.000 17.58 0.06 39.30 3.33
2994 6563 8.578308 AATAACGATTGCATATTTGGAACATG 57.422 30.769 0.00 0.00 39.30 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.