Multiple sequence alignment - TraesCS6B01G383200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G383200 chr6B 100.000 2009 0 0 1 2009 658176153 658178161 0.000000e+00 3711.0
1 TraesCS6B01G383200 chr6B 100.000 1357 0 0 2231 3587 658178383 658179739 0.000000e+00 2507.0
2 TraesCS6B01G383200 chr6B 80.423 710 109 20 704 1401 658233735 658234426 6.870000e-142 514.0
3 TraesCS6B01G383200 chr6B 89.153 378 41 0 1632 2009 658177592 658177969 4.190000e-129 472.0
4 TraesCS6B01G383200 chr6B 89.153 378 41 0 1440 1817 658177784 658178161 4.190000e-129 472.0
5 TraesCS6B01G383200 chr6B 86.634 404 37 10 2396 2796 658194728 658195117 7.110000e-117 431.0
6 TraesCS6B01G383200 chr6B 83.077 390 47 13 2398 2785 658241504 658241876 1.600000e-88 337.0
7 TraesCS6B01G383200 chr6B 92.342 222 16 1 2232 2452 658177822 658178043 7.480000e-82 315.0
8 TraesCS6B01G383200 chr6B 92.342 222 16 1 1670 1891 658178384 658178604 7.480000e-82 315.0
9 TraesCS6B01G383200 chr6B 79.193 471 77 10 1537 1992 658241063 658241527 1.250000e-79 307.0
10 TraesCS6B01G383200 chr6B 82.386 352 45 11 1507 1851 658177176 658177517 1.260000e-74 291.0
11 TraesCS6B01G383200 chr6B 82.386 352 45 11 1024 1365 658177659 658178003 1.260000e-74 291.0
12 TraesCS6B01G383200 chr6B 82.943 299 45 4 1508 1800 658241229 658241527 7.640000e-67 265.0
13 TraesCS6B01G383200 chr6B 81.250 320 58 2 1113 1431 658234654 658234972 1.280000e-64 257.0
14 TraesCS6B01G383200 chr6B 80.734 327 59 3 1113 1437 658234396 658234720 5.940000e-63 252.0
15 TraesCS6B01G383200 chr6B 94.595 148 8 0 2231 2378 658178014 658178161 2.790000e-56 230.0
16 TraesCS6B01G383200 chr6B 94.595 148 8 0 1862 2009 658178383 658178530 2.790000e-56 230.0
17 TraesCS6B01G383200 chr6B 80.000 325 50 10 1691 2009 658177168 658177483 3.600000e-55 226.0
18 TraesCS6B01G383200 chr6B 84.211 228 25 5 2261 2487 658177366 658177583 1.010000e-50 211.0
19 TraesCS6B01G383200 chr6B 84.211 228 25 5 1214 1431 658178413 658178639 1.010000e-50 211.0
20 TraesCS6B01G383200 chr6B 80.800 250 29 9 1513 1743 658515695 658515944 1.020000e-40 178.0
21 TraesCS6B01G383200 chr6B 80.402 199 39 0 2254 2452 658241222 658241420 6.200000e-33 152.0
22 TraesCS6B01G383200 chr6B 76.380 326 47 13 1445 1746 658241358 658241677 8.020000e-32 148.0
23 TraesCS6B01G383200 chr6B 89.899 99 10 0 2263 2361 658241429 658241527 1.050000e-25 128.0
24 TraesCS6B01G383200 chr6B 93.902 82 4 1 3507 3587 706322323 706322242 4.860000e-24 122.0
25 TraesCS6B01G383200 chr6B 94.118 68 3 1 646 713 85203458 85203524 6.340000e-18 102.0
26 TraesCS6B01G383200 chr6B 80.833 120 13 5 1442 1551 658477889 658478008 6.380000e-13 86.1
27 TraesCS6B01G383200 chr6B 80.833 120 13 5 1442 1551 658496674 658496793 6.380000e-13 86.1
28 TraesCS6B01G383200 chr6D 93.905 1050 48 5 2231 3277 434812382 434813418 0.000000e+00 1570.0
29 TraesCS6B01G383200 chr6D 90.872 734 65 2 706 1437 434811377 434812110 0.000000e+00 983.0
30 TraesCS6B01G383200 chr6D 81.461 739 117 14 704 1431 435072605 435073334 3.990000e-164 588.0
31 TraesCS6B01G383200 chr6D 86.861 411 48 4 707 1113 435012104 435012512 4.220000e-124 455.0
32 TraesCS6B01G383200 chr6D 86.925 413 24 6 1 402 434790458 434790851 1.530000e-118 436.0
33 TraesCS6B01G383200 chr6D 77.683 587 105 17 1442 2009 435074710 435075289 5.740000e-88 335.0
34 TraesCS6B01G383200 chr6D 83.473 357 44 9 1507 1857 434811697 434812044 5.780000e-83 318.0
35 TraesCS6B01G383200 chr6D 85.522 297 26 7 2407 2696 435012510 435012796 9.740000e-76 294.0
36 TraesCS6B01G383200 chr6D 86.090 266 30 2 2396 2661 435075448 435075706 2.730000e-71 279.0
37 TraesCS6B01G383200 chr6D 85.878 262 28 4 2261 2522 434811887 434812139 1.640000e-68 270.0
38 TraesCS6B01G383200 chr6D 81.191 319 43 11 1698 2009 434811696 434812004 1.290000e-59 241.0
39 TraesCS6B01G383200 chr6D 92.771 166 12 0 1844 2009 434812364 434812529 1.290000e-59 241.0
40 TraesCS6B01G383200 chr6D 92.517 147 11 0 1576 1722 434812015 434812161 1.010000e-50 211.0
41 TraesCS6B01G383200 chr6D 79.725 291 53 1 1579 1863 435073749 435074039 4.690000e-49 206.0
42 TraesCS6B01G383200 chr6D 88.679 159 18 0 1507 1665 434811886 434812044 1.020000e-45 195.0
43 TraesCS6B01G383200 chr6D 95.000 80 4 0 3262 3341 434813434 434813513 3.760000e-25 126.0
44 TraesCS6B01G383200 chr6D 92.754 69 3 2 647 713 455977209 455977141 8.200000e-17 99.0
45 TraesCS6B01G383200 chr6A 92.562 605 39 4 2264 2864 581983257 581983859 0.000000e+00 863.0
46 TraesCS6B01G383200 chr6A 89.109 404 42 1 710 1113 581982637 581983038 5.350000e-138 501.0
47 TraesCS6B01G383200 chr6A 87.306 386 45 3 729 1113 582086246 582086628 4.250000e-119 438.0
48 TraesCS6B01G383200 chr6A 86.165 412 40 8 2396 2806 582086615 582087010 2.560000e-116 429.0
49 TraesCS6B01G383200 chr6A 84.987 393 39 12 2396 2785 582095953 582096328 7.270000e-102 381.0
50 TraesCS6B01G383200 chr6A 85.838 346 29 10 1 335 581981583 581981919 2.050000e-92 350.0
51 TraesCS6B01G383200 chr6A 89.695 262 15 4 3092 3341 581984019 581984280 1.240000e-84 324.0
52 TraesCS6B01G383200 chr6A 78.205 546 91 20 1484 2009 582095257 582095794 1.240000e-84 324.0
53 TraesCS6B01G383200 chr6A 86.572 283 26 6 64 335 582091009 582091290 5.820000e-78 302.0
54 TraesCS6B01G383200 chr6A 82.154 325 58 0 1113 1437 582093800 582094124 2.730000e-71 279.0
55 TraesCS6B01G383200 chr6A 81.388 317 59 0 1121 1437 582094324 582094640 3.550000e-65 259.0
56 TraesCS6B01G383200 chr6A 85.124 242 26 4 2396 2637 581983025 581983256 4.630000e-59 239.0
57 TraesCS6B01G383200 chr6A 91.667 168 11 3 3340 3505 581984579 581984745 2.790000e-56 230.0
58 TraesCS6B01G383200 chr6A 82.239 259 33 7 1499 1746 581982941 581983197 1.010000e-50 211.0
59 TraesCS6B01G383200 chr6A 82.239 259 33 7 1499 1746 582086531 582086787 1.010000e-50 211.0
60 TraesCS6B01G383200 chr6A 86.243 189 26 0 1511 1699 581983257 581983445 4.690000e-49 206.0
61 TraesCS6B01G383200 chr6A 79.787 282 51 2 1585 1860 582094296 582094577 2.180000e-47 200.0
62 TraesCS6B01G383200 chr6A 82.353 221 39 0 1113 1333 582094832 582095052 3.650000e-45 193.0
63 TraesCS6B01G383200 chr6A 81.696 224 35 3 1113 1333 582092460 582092680 7.910000e-42 182.0
64 TraesCS6B01G383200 chr6A 93.805 113 7 0 1897 2009 581983259 581983371 1.710000e-38 171.0
65 TraesCS6B01G383200 chr6A 92.453 106 7 1 751 856 582090156 582090260 2.230000e-32 150.0
66 TraesCS6B01G383200 chr6A 79.825 114 13 5 1448 1551 582511839 582511952 1.380000e-09 75.0
67 TraesCS6B01G383200 chr1B 95.122 82 3 1 3507 3587 508571127 508571208 1.050000e-25 128.0
68 TraesCS6B01G383200 chr4B 93.976 83 4 1 3506 3587 646808014 646808096 1.350000e-24 124.0
69 TraesCS6B01G383200 chr4B 96.154 52 2 0 1027 1078 57136702 57136651 6.380000e-13 86.1
70 TraesCS6B01G383200 chr4B 94.231 52 3 0 1027 1078 57136885 57136834 2.970000e-11 80.5
71 TraesCS6B01G383200 chr3B 94.937 79 4 0 3509 3587 732911087 732911009 1.350000e-24 124.0
72 TraesCS6B01G383200 chr7B 93.827 81 5 0 3507 3587 612002224 612002144 4.860000e-24 122.0
73 TraesCS6B01G383200 chr7B 94.937 79 3 1 3510 3587 742896781 742896703 4.860000e-24 122.0
74 TraesCS6B01G383200 chr7B 95.238 63 2 1 651 713 582643097 582643036 8.200000e-17 99.0
75 TraesCS6B01G383200 chr7B 93.939 66 2 2 648 713 585609702 585609639 8.200000e-17 99.0
76 TraesCS6B01G383200 chrUn 92.857 84 5 1 3505 3587 41802593 41802676 1.750000e-23 121.0
77 TraesCS6B01G383200 chrUn 92.857 84 5 1 3505 3587 403045275 403045358 1.750000e-23 121.0
78 TraesCS6B01G383200 chr2B 90.217 92 6 2 3496 3587 797541460 797541372 2.260000e-22 117.0
79 TraesCS6B01G383200 chr5D 79.012 162 30 4 3345 3505 270112397 270112555 1.360000e-19 108.0
80 TraesCS6B01G383200 chr5D 94.118 68 4 0 646 713 544401471 544401404 1.760000e-18 104.0
81 TraesCS6B01G383200 chr4D 98.276 58 1 0 656 713 13268241 13268298 6.340000e-18 102.0
82 TraesCS6B01G383200 chr4D 96.154 52 2 0 1027 1078 39233430 39233379 6.380000e-13 86.1
83 TraesCS6B01G383200 chr1D 98.276 58 1 0 656 713 12952867 12952810 6.340000e-18 102.0
84 TraesCS6B01G383200 chr2D 95.312 64 1 2 651 713 638232696 638232758 2.280000e-17 100.0
85 TraesCS6B01G383200 chr3A 95.238 63 2 1 651 713 67712307 67712368 8.200000e-17 99.0
86 TraesCS6B01G383200 chr4A 96.154 52 2 0 1027 1078 562290085 562290034 6.380000e-13 86.1
87 TraesCS6B01G383200 chr4A 94.231 52 3 0 1027 1078 562290262 562290211 2.970000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G383200 chr6B 658176153 658179739 3586 False 729.384615 3711 89.644154 1 3587 13 chr6B.!!$F6 3586
1 TraesCS6B01G383200 chr6B 658233735 658234972 1237 False 341.000000 514 80.802333 704 1437 3 chr6B.!!$F7 733
2 TraesCS6B01G383200 chr6B 658241063 658241876 813 False 222.833333 337 81.982333 1445 2785 6 chr6B.!!$F8 1340
3 TraesCS6B01G383200 chr6D 434811377 434813513 2136 False 461.666667 1570 89.365111 706 3341 9 chr6D.!!$F2 2635
4 TraesCS6B01G383200 chr6D 435012104 435012796 692 False 374.500000 455 86.191500 707 2696 2 chr6D.!!$F3 1989
5 TraesCS6B01G383200 chr6D 435072605 435075706 3101 False 352.000000 588 81.239750 704 2661 4 chr6D.!!$F4 1957
6 TraesCS6B01G383200 chr6A 581981583 581984745 3162 False 343.888889 863 88.475778 1 3505 9 chr6A.!!$F2 3504
7 TraesCS6B01G383200 chr6A 582086246 582096328 10082 False 279.000000 438 83.775417 64 2806 12 chr6A.!!$F3 2742

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
695 5879 0.041839 GCGCTTTGGCTCATCGTATG 60.042 55.0 0.00 0.0 36.09 2.39 F
1519 6758 0.098905 CGACATCGGCGAGAAGAAGA 59.901 55.0 17.22 0.0 35.37 2.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2268 11847 0.036388 TGTTCTCCATGACGGCCTTC 60.036 55.0 1.37 1.37 33.14 3.46 R
3051 13239 0.171231 GTCTCGGCCATTTTGCTTCC 59.829 55.0 2.24 0.00 0.00 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 4791 1.402511 CAGCGCTTTCAGTTTTCAGC 58.597 50.000 7.50 0.00 0.00 4.26
118 4819 8.970859 AGACCAGATAATTGAGATCGATTTTT 57.029 30.769 0.00 0.00 32.50 1.94
199 4900 2.302733 GTGAATCCCCAACCTGCATTTT 59.697 45.455 0.00 0.00 0.00 1.82
204 4905 6.614906 TGAATCCCCAACCTGCATTTTAATAT 59.385 34.615 0.00 0.00 0.00 1.28
268 4980 1.627329 TGAGGACATTGCTCTCTGCTT 59.373 47.619 7.90 0.00 43.37 3.91
273 4985 3.562505 GACATTGCTCTCTGCTTTTGTG 58.437 45.455 0.00 0.00 43.37 3.33
284 4996 4.180057 TCTGCTTTTGTGTTCGCAAATTT 58.820 34.783 11.40 0.00 38.05 1.82
304 5016 4.836125 TTCCTGCTTCACAGTTTTGATC 57.164 40.909 0.00 0.00 45.68 2.92
305 5017 3.149196 TCCTGCTTCACAGTTTTGATCC 58.851 45.455 0.00 0.00 45.68 3.36
311 5023 3.940209 TCACAGTTTTGATCCCATTGC 57.060 42.857 0.00 0.00 0.00 3.56
335 5047 6.622896 GCGGTTGTGATTCTTTACTGCTAAAT 60.623 38.462 0.00 0.00 37.94 1.40
336 5048 6.961554 CGGTTGTGATTCTTTACTGCTAAATC 59.038 38.462 0.00 0.00 0.00 2.17
338 5050 7.965107 GGTTGTGATTCTTTACTGCTAAATCAG 59.035 37.037 0.00 0.00 37.11 2.90
340 5052 6.599244 TGTGATTCTTTACTGCTAAATCAGGG 59.401 38.462 0.00 0.00 37.11 4.45
343 5055 4.108570 TCTTTACTGCTAAATCAGGGGGA 58.891 43.478 0.00 0.00 38.36 4.81
345 5057 4.938575 TTACTGCTAAATCAGGGGGAAA 57.061 40.909 0.00 0.00 38.36 3.13
346 5058 3.087370 ACTGCTAAATCAGGGGGAAAC 57.913 47.619 0.00 0.00 38.36 2.78
347 5059 2.378547 ACTGCTAAATCAGGGGGAAACA 59.621 45.455 0.00 0.00 38.36 2.83
348 5060 3.181423 ACTGCTAAATCAGGGGGAAACAA 60.181 43.478 0.00 0.00 38.36 2.83
349 5061 4.026052 CTGCTAAATCAGGGGGAAACAAT 58.974 43.478 0.00 0.00 0.00 2.71
350 5062 4.424842 TGCTAAATCAGGGGGAAACAATT 58.575 39.130 0.00 0.00 0.00 2.32
353 5065 5.279960 GCTAAATCAGGGGGAAACAATTTGT 60.280 40.000 0.00 0.00 0.00 2.83
354 5066 4.622260 AATCAGGGGGAAACAATTTGTG 57.378 40.909 2.13 0.00 0.00 3.33
355 5067 2.324541 TCAGGGGGAAACAATTTGTGG 58.675 47.619 2.13 0.00 0.00 4.17
357 5069 3.117093 TCAGGGGGAAACAATTTGTGGTA 60.117 43.478 2.13 0.00 0.00 3.25
359 5071 3.837731 AGGGGGAAACAATTTGTGGTATG 59.162 43.478 2.13 0.00 0.00 2.39
363 5075 3.679502 GGAAACAATTTGTGGTATGCTGC 59.320 43.478 2.13 0.00 0.00 5.25
366 5078 3.852286 ACAATTTGTGGTATGCTGCATG 58.148 40.909 24.59 8.11 0.00 4.06
367 5079 3.258872 ACAATTTGTGGTATGCTGCATGT 59.741 39.130 24.59 8.76 0.00 3.21
373 5085 3.627123 TGTGGTATGCTGCATGTATTGAC 59.373 43.478 24.59 13.18 0.00 3.18
374 5086 2.871633 TGGTATGCTGCATGTATTGACG 59.128 45.455 24.59 0.00 0.00 4.35
376 5088 3.303329 GGTATGCTGCATGTATTGACGTG 60.303 47.826 24.59 0.00 44.24 4.49
379 5091 1.942657 GCTGCATGTATTGACGTGGAT 59.057 47.619 0.00 0.00 41.50 3.41
380 5092 2.355756 GCTGCATGTATTGACGTGGATT 59.644 45.455 0.00 0.00 41.50 3.01
381 5093 3.546815 GCTGCATGTATTGACGTGGATTC 60.547 47.826 0.00 0.00 41.50 2.52
382 5094 3.604582 TGCATGTATTGACGTGGATTCA 58.395 40.909 0.00 0.00 42.06 2.57
383 5095 3.622612 TGCATGTATTGACGTGGATTCAG 59.377 43.478 0.00 0.00 42.06 3.02
384 5096 3.623060 GCATGTATTGACGTGGATTCAGT 59.377 43.478 0.00 0.00 42.06 3.41
387 5489 6.611381 CATGTATTGACGTGGATTCAGTTTT 58.389 36.000 0.00 0.00 38.70 2.43
388 5490 6.236017 TGTATTGACGTGGATTCAGTTTTC 57.764 37.500 0.00 0.00 0.00 2.29
391 5493 5.917541 TTGACGTGGATTCAGTTTTCTAC 57.082 39.130 0.00 0.00 0.00 2.59
472 5619 5.006455 CGTATGCTTCGTCTAGTTACTCTCA 59.994 44.000 0.00 0.00 0.00 3.27
476 5623 6.114089 TGCTTCGTCTAGTTACTCTCATAGT 58.886 40.000 0.00 0.00 42.62 2.12
478 5625 6.293027 GCTTCGTCTAGTTACTCTCATAGTCC 60.293 46.154 0.00 0.00 39.80 3.85
500 5648 4.126437 CCATTGTCTTATATGCCGACACA 58.874 43.478 0.00 0.00 37.40 3.72
517 5669 3.545703 ACACATTCGATCTTCCAATCCC 58.454 45.455 0.00 0.00 0.00 3.85
535 5687 6.332630 CAATCCCCTTAAGCAAACAATACAG 58.667 40.000 0.00 0.00 0.00 2.74
537 5689 6.129414 TCCCCTTAAGCAAACAATACAGTA 57.871 37.500 0.00 0.00 0.00 2.74
538 5690 5.941647 TCCCCTTAAGCAAACAATACAGTAC 59.058 40.000 0.00 0.00 0.00 2.73
557 5709 7.327214 ACAGTACCATTTTTGCAAGAGAAAAA 58.673 30.769 0.00 0.00 36.86 1.94
558 5710 7.492344 ACAGTACCATTTTTGCAAGAGAAAAAG 59.508 33.333 0.00 0.00 36.12 2.27
560 5712 8.257306 AGTACCATTTTTGCAAGAGAAAAAGAA 58.743 29.630 0.00 0.00 36.12 2.52
563 5715 6.762661 CCATTTTTGCAAGAGAAAAAGAAGGA 59.237 34.615 0.00 0.00 36.12 3.36
564 5716 7.443272 CCATTTTTGCAAGAGAAAAAGAAGGAT 59.557 33.333 0.00 0.00 36.12 3.24
565 5717 8.493547 CATTTTTGCAAGAGAAAAAGAAGGATC 58.506 33.333 0.00 0.00 36.12 3.36
567 5719 3.753272 TGCAAGAGAAAAAGAAGGATCGG 59.247 43.478 0.00 0.00 0.00 4.18
568 5720 4.003648 GCAAGAGAAAAAGAAGGATCGGA 58.996 43.478 0.00 0.00 0.00 4.55
569 5721 4.637977 GCAAGAGAAAAAGAAGGATCGGAT 59.362 41.667 0.00 0.00 0.00 4.18
570 5722 5.448360 GCAAGAGAAAAAGAAGGATCGGATG 60.448 44.000 0.00 0.00 0.00 3.51
575 5728 6.914259 AGAAAAAGAAGGATCGGATGTTTTC 58.086 36.000 0.00 11.57 35.14 2.29
577 5730 4.576330 AAGAAGGATCGGATGTTTTCCT 57.424 40.909 0.00 0.00 42.99 3.36
613 5770 0.101399 CCAGACGAGGACGAATGAGG 59.899 60.000 0.00 0.00 42.66 3.86
652 5836 4.467084 CGCCCGCTGCCTTCCTTA 62.467 66.667 0.00 0.00 36.24 2.69
653 5837 2.193248 GCCCGCTGCCTTCCTTAT 59.807 61.111 0.00 0.00 0.00 1.73
654 5838 1.894282 GCCCGCTGCCTTCCTTATC 60.894 63.158 0.00 0.00 0.00 1.75
655 5839 1.832912 CCCGCTGCCTTCCTTATCT 59.167 57.895 0.00 0.00 0.00 1.98
656 5840 0.181350 CCCGCTGCCTTCCTTATCTT 59.819 55.000 0.00 0.00 0.00 2.40
657 5841 1.408822 CCCGCTGCCTTCCTTATCTTT 60.409 52.381 0.00 0.00 0.00 2.52
658 5842 2.369394 CCGCTGCCTTCCTTATCTTTT 58.631 47.619 0.00 0.00 0.00 2.27
659 5843 2.356069 CCGCTGCCTTCCTTATCTTTTC 59.644 50.000 0.00 0.00 0.00 2.29
660 5844 2.356069 CGCTGCCTTCCTTATCTTTTCC 59.644 50.000 0.00 0.00 0.00 3.13
661 5845 3.625853 GCTGCCTTCCTTATCTTTTCCT 58.374 45.455 0.00 0.00 0.00 3.36
662 5846 3.379688 GCTGCCTTCCTTATCTTTTCCTG 59.620 47.826 0.00 0.00 0.00 3.86
663 5847 4.848357 CTGCCTTCCTTATCTTTTCCTGA 58.152 43.478 0.00 0.00 0.00 3.86
664 5848 5.255397 TGCCTTCCTTATCTTTTCCTGAA 57.745 39.130 0.00 0.00 0.00 3.02
665 5849 5.640147 TGCCTTCCTTATCTTTTCCTGAAA 58.360 37.500 0.00 0.00 0.00 2.69
666 5850 5.711976 TGCCTTCCTTATCTTTTCCTGAAAG 59.288 40.000 0.00 0.00 44.99 2.62
677 5861 5.703876 CTTTTCCTGAAAGAACTATGTGGC 58.296 41.667 0.00 0.00 46.24 5.01
678 5862 2.972625 TCCTGAAAGAACTATGTGGCG 58.027 47.619 0.00 0.00 34.07 5.69
679 5863 1.398390 CCTGAAAGAACTATGTGGCGC 59.602 52.381 0.00 0.00 34.07 6.53
680 5864 2.350522 CTGAAAGAACTATGTGGCGCT 58.649 47.619 7.64 0.00 34.07 5.92
681 5865 2.744202 CTGAAAGAACTATGTGGCGCTT 59.256 45.455 7.64 0.00 34.07 4.68
682 5866 3.146066 TGAAAGAACTATGTGGCGCTTT 58.854 40.909 7.64 0.00 0.00 3.51
683 5867 3.058293 TGAAAGAACTATGTGGCGCTTTG 60.058 43.478 7.64 0.00 0.00 2.77
684 5868 1.453155 AGAACTATGTGGCGCTTTGG 58.547 50.000 7.64 0.00 0.00 3.28
685 5869 0.179163 GAACTATGTGGCGCTTTGGC 60.179 55.000 7.64 0.00 45.12 4.52
686 5870 0.609131 AACTATGTGGCGCTTTGGCT 60.609 50.000 7.64 0.00 45.14 4.75
687 5871 1.026718 ACTATGTGGCGCTTTGGCTC 61.027 55.000 7.64 0.00 45.14 4.70
689 5873 2.282391 TGTGGCGCTTTGGCTCAT 60.282 55.556 7.64 0.00 45.14 2.90
690 5874 2.334946 TGTGGCGCTTTGGCTCATC 61.335 57.895 7.64 0.00 45.14 2.92
691 5875 3.126879 TGGCGCTTTGGCTCATCG 61.127 61.111 7.64 0.00 45.14 3.84
692 5876 3.127533 GGCGCTTTGGCTCATCGT 61.128 61.111 7.64 0.00 40.72 3.73
693 5877 1.813753 GGCGCTTTGGCTCATCGTA 60.814 57.895 7.64 0.00 40.72 3.43
694 5878 1.160329 GGCGCTTTGGCTCATCGTAT 61.160 55.000 7.64 0.00 40.72 3.06
695 5879 0.041839 GCGCTTTGGCTCATCGTATG 60.042 55.000 0.00 0.00 36.09 2.39
696 5880 1.570813 CGCTTTGGCTCATCGTATGA 58.429 50.000 0.00 0.00 37.76 2.15
697 5881 2.138320 CGCTTTGGCTCATCGTATGAT 58.862 47.619 0.00 0.00 38.85 2.45
761 5947 4.758251 TGCCGACCACTGATGCGG 62.758 66.667 0.00 0.00 46.14 5.69
820 6014 0.183731 CCACCCCTCTTTATGGGCTC 59.816 60.000 0.00 0.00 46.43 4.70
896 6090 3.558533 CCCTCCAACGGCCTATAAATACC 60.559 52.174 0.00 0.00 0.00 2.73
910 6104 3.723235 ATACCGCCTCGTGCTGCAG 62.723 63.158 10.11 10.11 38.05 4.41
913 6107 2.104928 CGCCTCGTGCTGCAGATA 59.895 61.111 20.43 1.74 38.05 1.98
932 6135 2.428544 ACTTTACACAACCACCTGCA 57.571 45.000 0.00 0.00 0.00 4.41
941 6144 1.037030 AACCACCTGCACCACACAAG 61.037 55.000 0.00 0.00 0.00 3.16
954 6162 4.335315 CACCACACAAGCAAGAGAAGTAAA 59.665 41.667 0.00 0.00 0.00 2.01
955 6163 4.335594 ACCACACAAGCAAGAGAAGTAAAC 59.664 41.667 0.00 0.00 0.00 2.01
970 6182 3.393800 AGTAAACACAGCAGCACTAGTG 58.606 45.455 18.93 18.93 35.09 2.74
977 6189 2.038952 ACAGCAGCACTAGTGGATTTCA 59.961 45.455 23.95 0.00 0.00 2.69
989 6201 2.996621 GTGGATTTCACGACTGAGAAGG 59.003 50.000 0.00 0.00 36.56 3.46
1005 6217 0.250513 AAGGTCGGCTCAAGATGGAC 59.749 55.000 0.00 0.00 0.00 4.02
1102 6314 4.379243 ACAAGGAGACCGCTGGCG 62.379 66.667 8.08 8.08 39.44 5.69
1257 6496 0.329596 ACATCAAGGACAAGCTCCCC 59.670 55.000 0.00 0.00 40.53 4.81
1317 6556 3.031417 GCAGCAGGGACATACCGGT 62.031 63.158 13.98 13.98 40.11 5.28
1394 6633 4.541482 CACGGCGATGCATGGCAC 62.541 66.667 30.93 20.18 43.04 5.01
1415 6654 2.270850 GGCGACCAATGGCACCTA 59.729 61.111 0.00 0.00 0.00 3.08
1416 6655 1.152963 GGCGACCAATGGCACCTAT 60.153 57.895 0.00 0.00 0.00 2.57
1417 6656 1.447317 GGCGACCAATGGCACCTATG 61.447 60.000 0.00 0.00 0.00 2.23
1418 6657 1.447317 GCGACCAATGGCACCTATGG 61.447 60.000 0.00 9.05 38.91 2.74
1419 6658 0.819259 CGACCAATGGCACCTATGGG 60.819 60.000 0.00 0.00 37.26 4.00
1420 6659 0.468029 GACCAATGGCACCTATGGGG 60.468 60.000 0.00 0.00 37.26 4.96
1421 6660 0.923729 ACCAATGGCACCTATGGGGA 60.924 55.000 0.00 0.00 37.26 4.81
1422 6661 0.178981 CCAATGGCACCTATGGGGAG 60.179 60.000 0.00 0.00 38.76 4.30
1427 6666 2.505982 CACCTATGGGGAGCACGG 59.494 66.667 0.00 0.00 38.76 4.94
1428 6667 2.063979 CACCTATGGGGAGCACGGA 61.064 63.158 0.00 0.00 38.76 4.69
1429 6668 2.064581 ACCTATGGGGAGCACGGAC 61.065 63.158 0.00 0.00 38.76 4.79
1430 6669 2.063979 CCTATGGGGAGCACGGACA 61.064 63.158 0.00 0.00 37.23 4.02
1431 6670 1.410850 CCTATGGGGAGCACGGACAT 61.411 60.000 0.00 0.00 37.23 3.06
1432 6671 1.338107 CTATGGGGAGCACGGACATA 58.662 55.000 0.00 0.00 0.00 2.29
1433 6672 1.000955 CTATGGGGAGCACGGACATAC 59.999 57.143 0.00 0.00 0.00 2.39
1434 6673 1.696097 ATGGGGAGCACGGACATACC 61.696 60.000 0.00 0.00 0.00 2.73
1464 6703 4.162690 GGTGGCAGCTACGGGGAG 62.163 72.222 9.90 0.00 0.00 4.30
1465 6704 4.840005 GTGGCAGCTACGGGGAGC 62.840 72.222 0.00 0.00 43.19 4.70
1467 6706 4.096003 GGCAGCTACGGGGAGCAA 62.096 66.667 5.56 0.00 45.43 3.91
1468 6707 2.046314 GCAGCTACGGGGAGCAAA 60.046 61.111 5.56 0.00 45.43 3.68
1469 6708 2.109126 GCAGCTACGGGGAGCAAAG 61.109 63.158 5.56 0.00 45.43 2.77
1470 6709 1.596934 CAGCTACGGGGAGCAAAGA 59.403 57.895 5.56 0.00 45.43 2.52
1471 6710 0.741221 CAGCTACGGGGAGCAAAGAC 60.741 60.000 5.56 0.00 45.43 3.01
1472 6711 1.192146 AGCTACGGGGAGCAAAGACA 61.192 55.000 5.56 0.00 45.43 3.41
1473 6712 0.107654 GCTACGGGGAGCAAAGACAT 60.108 55.000 0.00 0.00 42.36 3.06
1474 6713 1.138266 GCTACGGGGAGCAAAGACATA 59.862 52.381 0.00 0.00 42.36 2.29
1475 6714 2.822764 CTACGGGGAGCAAAGACATAC 58.177 52.381 0.00 0.00 0.00 2.39
1476 6715 0.252197 ACGGGGAGCAAAGACATACC 59.748 55.000 0.00 0.00 0.00 2.73
1477 6716 0.810031 CGGGGAGCAAAGACATACCG 60.810 60.000 0.00 0.00 0.00 4.02
1478 6717 0.463833 GGGGAGCAAAGACATACCGG 60.464 60.000 0.00 0.00 0.00 5.28
1479 6718 0.539986 GGGAGCAAAGACATACCGGA 59.460 55.000 9.46 0.00 0.00 5.14
1480 6719 1.473434 GGGAGCAAAGACATACCGGAG 60.473 57.143 9.46 0.00 0.00 4.63
1481 6720 1.207329 GGAGCAAAGACATACCGGAGT 59.793 52.381 9.46 2.96 0.00 3.85
1482 6721 2.271800 GAGCAAAGACATACCGGAGTG 58.728 52.381 9.46 9.08 0.00 3.51
1483 6722 1.899814 AGCAAAGACATACCGGAGTGA 59.100 47.619 9.46 0.00 0.00 3.41
1484 6723 2.000447 GCAAAGACATACCGGAGTGAC 59.000 52.381 9.46 6.83 0.00 3.67
1485 6724 2.618053 CAAAGACATACCGGAGTGACC 58.382 52.381 9.46 4.38 0.00 4.02
1514 6753 2.506217 GCACGACATCGGCGAGAA 60.506 61.111 17.22 0.00 44.95 2.87
1515 6754 2.508891 GCACGACATCGGCGAGAAG 61.509 63.158 17.22 10.47 44.95 2.85
1516 6755 1.136774 CACGACATCGGCGAGAAGA 59.863 57.895 17.22 0.00 44.95 2.87
1517 6756 0.456142 CACGACATCGGCGAGAAGAA 60.456 55.000 17.22 0.00 44.95 2.52
1518 6757 0.179161 ACGACATCGGCGAGAAGAAG 60.179 55.000 17.22 7.02 44.95 2.85
1519 6758 0.098905 CGACATCGGCGAGAAGAAGA 59.901 55.000 17.22 0.00 35.37 2.87
1520 6759 1.833860 GACATCGGCGAGAAGAAGAG 58.166 55.000 17.22 0.08 0.00 2.85
1521 6760 0.179124 ACATCGGCGAGAAGAAGAGC 60.179 55.000 17.22 0.00 0.00 4.09
1522 6761 0.873743 CATCGGCGAGAAGAAGAGCC 60.874 60.000 17.22 0.00 45.67 4.70
1523 6762 1.040339 ATCGGCGAGAAGAAGAGCCT 61.040 55.000 17.22 0.00 46.85 4.58
1524 6763 1.226831 CGGCGAGAAGAAGAGCCTC 60.227 63.158 0.00 0.00 46.85 4.70
1525 6764 1.893786 GGCGAGAAGAAGAGCCTCA 59.106 57.895 0.00 0.00 45.67 3.86
1526 6765 0.463620 GGCGAGAAGAAGAGCCTCAT 59.536 55.000 0.00 0.00 45.67 2.90
1527 6766 1.569708 GCGAGAAGAAGAGCCTCATG 58.430 55.000 0.00 0.00 0.00 3.07
1528 6767 1.805871 GCGAGAAGAAGAGCCTCATGG 60.806 57.143 0.00 0.00 0.00 3.66
1529 6768 1.753649 CGAGAAGAAGAGCCTCATGGA 59.246 52.381 0.00 0.00 34.57 3.41
1530 6769 2.223782 CGAGAAGAAGAGCCTCATGGAG 60.224 54.545 0.00 0.00 34.57 3.86
1531 6770 3.030291 GAGAAGAAGAGCCTCATGGAGA 58.970 50.000 0.00 0.00 34.57 3.71
1532 6771 3.448934 AGAAGAAGAGCCTCATGGAGAA 58.551 45.455 0.00 0.00 34.57 2.87
1533 6772 3.197549 AGAAGAAGAGCCTCATGGAGAAC 59.802 47.826 0.00 0.00 34.57 3.01
1534 6773 2.544721 AGAAGAGCCTCATGGAGAACA 58.455 47.619 0.00 0.00 34.57 3.18
1535 6774 3.113824 AGAAGAGCCTCATGGAGAACAT 58.886 45.455 0.00 0.00 41.57 2.71
1536 6775 3.134442 AGAAGAGCCTCATGGAGAACATC 59.866 47.826 0.00 0.00 37.84 3.06
1537 6776 2.475155 AGAGCCTCATGGAGAACATCA 58.525 47.619 0.00 0.00 37.84 3.07
1538 6777 2.842496 AGAGCCTCATGGAGAACATCAA 59.158 45.455 0.00 0.00 37.84 2.57
1539 6778 3.118334 AGAGCCTCATGGAGAACATCAAG 60.118 47.826 0.00 0.00 37.84 3.02
1540 6779 2.092538 AGCCTCATGGAGAACATCAAGG 60.093 50.000 0.00 0.00 40.32 3.61
1541 6780 2.092753 GCCTCATGGAGAACATCAAGGA 60.093 50.000 8.65 0.00 40.00 3.36
1562 6801 4.828296 GCTCCCTGGTGGCCATGG 62.828 72.222 9.72 7.63 40.07 3.66
1579 6818 2.317230 GGTGACAACCAACAGACCG 58.683 57.895 0.00 0.00 46.75 4.79
1588 6827 3.560251 AACAGACCGCTGGCACCT 61.560 61.111 0.00 0.00 46.60 4.00
1601 6840 4.473520 CACCTACGGGCAGCAGGG 62.474 72.222 8.82 0.00 37.72 4.45
1602 6841 4.715130 ACCTACGGGCAGCAGGGA 62.715 66.667 8.82 0.00 37.72 4.20
1605 6844 3.665675 CTACGGGCAGCAGGGACAC 62.666 68.421 0.00 0.00 0.00 3.67
1666 7619 2.032860 CTATGGGGAGCAGGGACACG 62.033 65.000 0.00 0.00 0.00 4.49
1750 9295 3.927481 GACAAGCTCCCTGGTGGCC 62.927 68.421 0.00 0.00 0.00 5.36
1860 9405 2.029666 GAGCAGCACGGACACACT 59.970 61.111 0.00 0.00 0.00 3.55
1935 11514 1.366319 ACATCAAGGACAAGCTCCCT 58.634 50.000 0.00 0.00 40.53 4.20
1936 11515 1.004044 ACATCAAGGACAAGCTCCCTG 59.996 52.381 3.40 0.00 40.53 4.45
1937 11516 0.622665 ATCAAGGACAAGCTCCCTGG 59.377 55.000 3.40 1.21 40.53 4.45
1938 11517 0.768221 TCAAGGACAAGCTCCCTGGT 60.768 55.000 3.40 0.00 40.53 4.00
1939 11518 0.607489 CAAGGACAAGCTCCCTGGTG 60.607 60.000 3.40 0.00 40.53 4.17
1940 11519 1.783250 AAGGACAAGCTCCCTGGTGG 61.783 60.000 3.40 0.00 40.53 4.61
1941 11520 2.360475 GACAAGCTCCCTGGTGGC 60.360 66.667 0.00 0.00 0.00 5.01
1942 11521 3.927481 GACAAGCTCCCTGGTGGCC 62.927 68.421 0.00 0.00 0.00 5.36
1943 11522 3.970410 CAAGCTCCCTGGTGGCCA 61.970 66.667 0.00 0.00 0.00 5.36
1944 11523 3.971702 AAGCTCCCTGGTGGCCAC 61.972 66.667 28.57 28.57 0.00 5.01
1946 11525 4.729918 GCTCCCTGGTGGCCACAG 62.730 72.222 35.78 27.68 35.74 3.66
1947 11526 3.252284 CTCCCTGGTGGCCACAGT 61.252 66.667 35.78 0.00 34.16 3.55
1948 11527 3.557903 CTCCCTGGTGGCCACAGTG 62.558 68.421 35.78 23.36 34.16 3.66
1949 11528 3.569210 CCCTGGTGGCCACAGTGA 61.569 66.667 35.78 16.01 34.16 3.41
1950 11529 2.281761 CCTGGTGGCCACAGTGAC 60.282 66.667 35.78 19.24 34.16 3.67
1951 11530 2.510411 CTGGTGGCCACAGTGACA 59.490 61.111 35.78 22.66 0.00 3.58
1952 11531 1.152984 CTGGTGGCCACAGTGACAA 60.153 57.895 35.78 11.66 0.00 3.18
1953 11532 1.447317 CTGGTGGCCACAGTGACAAC 61.447 60.000 35.78 17.03 0.00 3.32
1954 11533 2.193536 GGTGGCCACAGTGACAACC 61.194 63.158 35.78 12.94 0.00 3.77
1955 11534 1.453015 GTGGCCACAGTGACAACCA 60.453 57.895 31.23 1.27 0.00 3.67
1956 11535 1.152984 TGGCCACAGTGACAACCAG 60.153 57.895 0.00 0.00 0.00 4.00
1957 11536 2.555547 GGCCACAGTGACAACCAGC 61.556 63.158 0.62 0.00 0.00 4.85
1958 11537 1.823470 GCCACAGTGACAACCAGCA 60.823 57.895 0.62 0.00 0.00 4.41
1959 11538 1.789078 GCCACAGTGACAACCAGCAG 61.789 60.000 0.62 0.00 0.00 4.24
1960 11539 0.179048 CCACAGTGACAACCAGCAGA 60.179 55.000 0.62 0.00 0.00 4.26
1961 11540 0.940126 CACAGTGACAACCAGCAGAC 59.060 55.000 0.00 0.00 0.00 3.51
1962 11541 0.179045 ACAGTGACAACCAGCAGACC 60.179 55.000 0.00 0.00 0.00 3.85
1963 11542 1.069765 AGTGACAACCAGCAGACCG 59.930 57.895 0.00 0.00 0.00 4.79
1964 11543 1.961277 GTGACAACCAGCAGACCGG 60.961 63.158 0.00 0.00 0.00 5.28
1965 11544 2.426023 GACAACCAGCAGACCGGT 59.574 61.111 6.92 6.92 36.98 5.28
1966 11545 1.961277 GACAACCAGCAGACCGGTG 60.961 63.158 14.63 0.00 43.02 4.94
1971 11550 4.767255 CAGCAGACCGGTGGAGCC 62.767 72.222 14.63 0.00 39.55 4.70
1973 11552 3.075005 GCAGACCGGTGGAGCCTA 61.075 66.667 14.63 0.00 34.25 3.93
1974 11553 2.893398 CAGACCGGTGGAGCCTAC 59.107 66.667 14.63 0.00 34.25 3.18
1975 11554 2.754658 AGACCGGTGGAGCCTACG 60.755 66.667 14.63 0.00 34.25 3.51
1976 11555 2.753043 GACCGGTGGAGCCTACGA 60.753 66.667 14.63 0.00 34.25 3.43
1977 11556 2.754658 ACCGGTGGAGCCTACGAG 60.755 66.667 6.12 0.00 34.25 4.18
1978 11557 4.208686 CCGGTGGAGCCTACGAGC 62.209 72.222 0.00 0.00 34.25 5.03
1979 11558 3.449227 CGGTGGAGCCTACGAGCA 61.449 66.667 0.00 0.00 34.23 4.26
1980 11559 2.496817 GGTGGAGCCTACGAGCAG 59.503 66.667 0.00 0.00 34.23 4.24
1981 11560 2.202810 GTGGAGCCTACGAGCAGC 60.203 66.667 0.00 0.00 34.23 5.25
1982 11561 2.679996 TGGAGCCTACGAGCAGCA 60.680 61.111 0.00 0.00 34.23 4.41
1983 11562 2.105930 GGAGCCTACGAGCAGCAG 59.894 66.667 0.00 0.00 34.23 4.24
1984 11563 2.105930 GAGCCTACGAGCAGCAGG 59.894 66.667 0.00 0.00 36.43 4.85
1985 11564 3.438017 GAGCCTACGAGCAGCAGGG 62.438 68.421 0.00 0.00 33.81 4.45
1986 11565 3.461773 GCCTACGAGCAGCAGGGA 61.462 66.667 0.00 0.00 33.81 4.20
1987 11566 2.496817 CCTACGAGCAGCAGGGAC 59.503 66.667 0.00 0.00 29.33 4.46
1988 11567 2.351244 CCTACGAGCAGCAGGGACA 61.351 63.158 0.00 0.00 29.33 4.02
1989 11568 1.153745 CTACGAGCAGCAGGGACAC 60.154 63.158 0.00 0.00 0.00 3.67
1990 11569 1.877576 CTACGAGCAGCAGGGACACA 61.878 60.000 0.00 0.00 0.00 3.72
1991 11570 2.154798 TACGAGCAGCAGGGACACAC 62.155 60.000 0.00 0.00 0.00 3.82
1992 11571 2.359230 GAGCAGCAGGGACACACC 60.359 66.667 0.00 0.00 38.08 4.16
1993 11572 4.320456 AGCAGCAGGGACACACCG 62.320 66.667 0.00 0.00 40.11 4.94
2271 11850 3.882025 GGCACTGGCGAGAAGAAG 58.118 61.111 1.44 0.00 42.47 2.85
2272 11851 1.743252 GGCACTGGCGAGAAGAAGG 60.743 63.158 1.44 0.00 42.47 3.46
2273 11852 2.394563 GCACTGGCGAGAAGAAGGC 61.395 63.158 1.44 0.00 0.00 4.35
2277 11856 2.509561 GGCGAGAAGAAGGCCGTC 60.510 66.667 11.15 11.15 37.06 4.79
2278 11857 2.261671 GCGAGAAGAAGGCCGTCA 59.738 61.111 21.26 0.00 0.00 4.35
2279 11858 1.153549 GCGAGAAGAAGGCCGTCAT 60.154 57.895 21.26 9.05 0.00 3.06
2280 11859 1.424493 GCGAGAAGAAGGCCGTCATG 61.424 60.000 21.26 6.39 0.00 3.07
2281 11860 0.807667 CGAGAAGAAGGCCGTCATGG 60.808 60.000 21.26 4.03 42.50 3.66
2282 11861 0.537188 GAGAAGAAGGCCGTCATGGA 59.463 55.000 21.26 0.00 42.00 3.41
2283 11862 0.539051 AGAAGAAGGCCGTCATGGAG 59.461 55.000 21.26 0.00 42.00 3.86
2284 11863 0.537188 GAAGAAGGCCGTCATGGAGA 59.463 55.000 21.26 0.00 42.00 3.71
2285 11864 0.984230 AAGAAGGCCGTCATGGAGAA 59.016 50.000 21.26 0.00 42.00 2.87
2286 11865 0.250513 AGAAGGCCGTCATGGAGAAC 59.749 55.000 21.26 0.00 42.00 3.01
2287 11866 0.036388 GAAGGCCGTCATGGAGAACA 60.036 55.000 14.36 0.00 42.00 3.18
2288 11867 0.620556 AAGGCCGTCATGGAGAACAT 59.379 50.000 0.00 0.00 42.00 2.71
2289 11868 0.179000 AGGCCGTCATGGAGAACATC 59.821 55.000 0.00 0.00 42.00 3.06
2290 11869 0.107703 GGCCGTCATGGAGAACATCA 60.108 55.000 0.00 0.00 42.00 3.07
2291 11870 1.678728 GGCCGTCATGGAGAACATCAA 60.679 52.381 0.00 0.00 42.00 2.57
2292 11871 1.667724 GCCGTCATGGAGAACATCAAG 59.332 52.381 0.00 0.00 42.00 3.02
2293 11872 2.283298 CCGTCATGGAGAACATCAAGG 58.717 52.381 0.00 0.00 42.00 3.61
2294 11873 2.093500 CCGTCATGGAGAACATCAAGGA 60.093 50.000 0.00 0.00 42.00 3.36
2295 11874 2.932614 CGTCATGGAGAACATCAAGGAC 59.067 50.000 0.00 0.00 37.84 3.85
2296 11875 3.617288 CGTCATGGAGAACATCAAGGACA 60.617 47.826 0.00 0.00 37.84 4.02
2297 11876 4.326826 GTCATGGAGAACATCAAGGACAA 58.673 43.478 0.00 0.00 37.84 3.18
2298 11877 4.394300 GTCATGGAGAACATCAAGGACAAG 59.606 45.833 0.00 0.00 37.84 3.16
2299 11878 2.783135 TGGAGAACATCAAGGACAAGC 58.217 47.619 0.00 0.00 0.00 4.01
2300 11879 2.373169 TGGAGAACATCAAGGACAAGCT 59.627 45.455 0.00 0.00 0.00 3.74
2301 11880 3.006247 GGAGAACATCAAGGACAAGCTC 58.994 50.000 0.00 0.00 0.00 4.09
2302 11881 3.006247 GAGAACATCAAGGACAAGCTCC 58.994 50.000 0.00 0.00 39.81 4.70
2303 11882 2.087646 GAACATCAAGGACAAGCTCCC 58.912 52.381 0.00 0.00 40.53 4.30
2412 12528 2.176273 CGGCACCTATGAGCAGCAC 61.176 63.158 0.00 0.00 0.00 4.40
2415 12531 1.219124 CACCTATGAGCAGCACGGT 59.781 57.895 0.00 0.00 34.87 4.83
2416 12532 0.459899 CACCTATGAGCAGCACGGTA 59.540 55.000 0.00 0.00 33.33 4.02
2496 12672 2.420043 CACGGACACACGGGAACT 59.580 61.111 0.00 0.00 40.35 3.01
2571 12747 3.582647 TGGACAAGATCAAGGACAAGCTA 59.417 43.478 0.00 0.00 0.00 3.32
2729 12913 6.444633 TGTTTAAAGTTTTCACGGACAACAA 58.555 32.000 0.00 0.00 0.00 2.83
2744 12928 3.765026 ACAACAATGTGTTCACGGTTTC 58.235 40.909 0.00 0.00 38.77 2.78
2785 12970 4.266502 TCGTGCAAATTTCCTTTTTGTTCG 59.733 37.500 0.00 0.00 36.63 3.95
2790 12975 7.007009 GTGCAAATTTCCTTTTTGTTCGTTTTC 59.993 33.333 0.00 0.00 36.63 2.29
2829 13017 3.106407 GACAGACGCAGCGACCAC 61.106 66.667 24.65 9.70 0.00 4.16
2864 13052 4.344390 AGTCCGGGTTAATCTCAATCCTAC 59.656 45.833 0.00 0.00 0.00 3.18
2866 13054 4.905456 TCCGGGTTAATCTCAATCCTACAT 59.095 41.667 0.00 0.00 0.00 2.29
2867 13055 4.997395 CCGGGTTAATCTCAATCCTACATG 59.003 45.833 0.00 0.00 0.00 3.21
2868 13056 4.997395 CGGGTTAATCTCAATCCTACATGG 59.003 45.833 0.00 0.00 37.10 3.66
2869 13057 4.762251 GGGTTAATCTCAATCCTACATGGC 59.238 45.833 0.00 0.00 35.26 4.40
2870 13058 5.376625 GGTTAATCTCAATCCTACATGGCA 58.623 41.667 0.00 0.00 35.26 4.92
2871 13059 6.006449 GGTTAATCTCAATCCTACATGGCAT 58.994 40.000 0.00 0.00 35.26 4.40
2910 13098 5.221661 CCAACCCTACTATAGATCAACCACC 60.222 48.000 6.78 0.00 0.00 4.61
2938 13126 0.524862 GCACAACCTCAATCAGCAGG 59.475 55.000 0.00 0.00 35.69 4.85
2945 13133 1.380524 CTCAATCAGCAGGGCTTCAG 58.619 55.000 0.00 0.00 36.40 3.02
3016 13204 3.900446 GCACCAGCAGCTTGAAATT 57.100 47.368 0.00 0.00 41.58 1.82
3017 13205 1.425412 GCACCAGCAGCTTGAAATTG 58.575 50.000 0.00 0.00 41.58 2.32
3020 13208 2.229543 CACCAGCAGCTTGAAATTGCTA 59.770 45.455 0.00 0.00 45.75 3.49
3022 13210 3.057033 ACCAGCAGCTTGAAATTGCTAAG 60.057 43.478 0.00 1.98 45.75 2.18
3051 13239 2.074547 TTACGAAAAGAGGTCGGCAG 57.925 50.000 0.00 0.00 42.82 4.85
3078 13266 2.225068 AATGGCCGAGACAGAATACG 57.775 50.000 0.00 0.00 0.00 3.06
3151 13370 4.434266 CGCAAAGCACATACAATGAATACG 59.566 41.667 0.00 0.00 0.00 3.06
3163 13382 4.164221 ACAATGAATACGGAATCACCCTCT 59.836 41.667 0.00 0.00 34.64 3.69
3252 13482 7.566760 TGAAAGAAATCTTGCAACTACTTCA 57.433 32.000 1.19 0.00 38.52 3.02
3277 13538 4.765339 AGCGGTAAAAGAAATGGTAGCTTT 59.235 37.500 0.00 0.00 33.59 3.51
3337 13598 6.012858 TCTCTTCTTTAGAATAAACCCTGGCA 60.013 38.462 0.00 0.00 33.01 4.92
3341 13602 4.764050 TTAGAATAAACCCTGGCATCGA 57.236 40.909 0.00 0.00 0.00 3.59
3342 13603 2.919228 AGAATAAACCCTGGCATCGAC 58.081 47.619 0.00 0.00 0.00 4.20
3343 13604 2.238646 AGAATAAACCCTGGCATCGACA 59.761 45.455 0.00 0.00 0.00 4.35
3372 13934 1.639298 CCTAACACGCTGCAGCTTCC 61.639 60.000 34.22 8.09 39.32 3.46
3373 13935 1.959899 CTAACACGCTGCAGCTTCCG 61.960 60.000 34.22 21.78 39.32 4.30
3424 13986 2.738521 CACAAGGTGCCGTCGGAG 60.739 66.667 17.49 0.00 0.00 4.63
3433 13995 3.702048 CCGTCGGAGAAAGCCCCA 61.702 66.667 4.91 0.00 39.69 4.96
3509 14071 4.098847 GGACGACCCTCTCACACT 57.901 61.111 0.00 0.00 0.00 3.55
3510 14072 3.261250 GGACGACCCTCTCACACTA 57.739 57.895 0.00 0.00 0.00 2.74
3511 14073 1.096416 GGACGACCCTCTCACACTAG 58.904 60.000 0.00 0.00 0.00 2.57
3512 14074 1.613785 GGACGACCCTCTCACACTAGT 60.614 57.143 0.00 0.00 0.00 2.57
3513 14075 2.355513 GGACGACCCTCTCACACTAGTA 60.356 54.545 0.00 0.00 0.00 1.82
3514 14076 2.937799 GACGACCCTCTCACACTAGTAG 59.062 54.545 0.00 0.00 0.00 2.57
3515 14077 2.570752 ACGACCCTCTCACACTAGTAGA 59.429 50.000 3.59 0.00 0.00 2.59
3516 14078 3.008813 ACGACCCTCTCACACTAGTAGAA 59.991 47.826 3.59 0.00 0.00 2.10
3517 14079 4.008330 CGACCCTCTCACACTAGTAGAAA 58.992 47.826 3.59 0.00 0.00 2.52
3518 14080 4.458295 CGACCCTCTCACACTAGTAGAAAA 59.542 45.833 3.59 0.00 0.00 2.29
3519 14081 5.619533 CGACCCTCTCACACTAGTAGAAAAC 60.620 48.000 3.59 0.00 0.00 2.43
3520 14082 4.217983 ACCCTCTCACACTAGTAGAAAACG 59.782 45.833 3.59 0.00 0.00 3.60
3521 14083 4.380655 CCCTCTCACACTAGTAGAAAACGG 60.381 50.000 3.59 0.00 0.00 4.44
3522 14084 4.380655 CCTCTCACACTAGTAGAAAACGGG 60.381 50.000 3.59 0.00 0.00 5.28
3523 14085 4.401022 TCTCACACTAGTAGAAAACGGGA 58.599 43.478 3.59 0.00 0.00 5.14
3524 14086 4.217118 TCTCACACTAGTAGAAAACGGGAC 59.783 45.833 3.59 0.00 0.00 4.46
3525 14087 4.147321 TCACACTAGTAGAAAACGGGACT 58.853 43.478 3.59 0.00 0.00 3.85
3526 14088 4.586001 TCACACTAGTAGAAAACGGGACTT 59.414 41.667 3.59 0.00 0.00 3.01
3527 14089 5.069516 TCACACTAGTAGAAAACGGGACTTT 59.930 40.000 3.59 0.00 0.00 2.66
3528 14090 5.404667 CACACTAGTAGAAAACGGGACTTTC 59.595 44.000 3.59 0.00 33.75 2.62
3529 14091 4.620184 CACTAGTAGAAAACGGGACTTTCG 59.380 45.833 3.59 0.00 37.76 3.46
3530 14092 3.740631 AGTAGAAAACGGGACTTTCGT 57.259 42.857 0.00 0.00 43.14 3.85
3531 14093 3.646946 AGTAGAAAACGGGACTTTCGTC 58.353 45.455 0.00 0.00 40.18 4.20
3546 14108 7.591006 GACTTTCGTCCAAACTCAATATACA 57.409 36.000 0.00 0.00 33.98 2.29
3547 14109 7.360575 ACTTTCGTCCAAACTCAATATACAC 57.639 36.000 0.00 0.00 0.00 2.90
3548 14110 6.932400 ACTTTCGTCCAAACTCAATATACACA 59.068 34.615 0.00 0.00 0.00 3.72
3549 14111 7.606456 ACTTTCGTCCAAACTCAATATACACAT 59.394 33.333 0.00 0.00 0.00 3.21
3550 14112 7.915293 TTCGTCCAAACTCAATATACACATT 57.085 32.000 0.00 0.00 0.00 2.71
3551 14113 9.438228 TTTCGTCCAAACTCAATATACACATTA 57.562 29.630 0.00 0.00 0.00 1.90
3552 14114 8.642908 TCGTCCAAACTCAATATACACATTAG 57.357 34.615 0.00 0.00 0.00 1.73
3553 14115 8.255206 TCGTCCAAACTCAATATACACATTAGT 58.745 33.333 0.00 0.00 0.00 2.24
3554 14116 8.540492 CGTCCAAACTCAATATACACATTAGTC 58.460 37.037 0.00 0.00 0.00 2.59
3555 14117 8.827677 GTCCAAACTCAATATACACATTAGTCC 58.172 37.037 0.00 0.00 0.00 3.85
3556 14118 7.990886 TCCAAACTCAATATACACATTAGTCCC 59.009 37.037 0.00 0.00 0.00 4.46
3557 14119 7.042051 CCAAACTCAATATACACATTAGTCCCG 60.042 40.741 0.00 0.00 0.00 5.14
3558 14120 6.097915 ACTCAATATACACATTAGTCCCGG 57.902 41.667 0.00 0.00 0.00 5.73
3559 14121 5.601313 ACTCAATATACACATTAGTCCCGGT 59.399 40.000 0.00 0.00 0.00 5.28
3560 14122 6.099269 ACTCAATATACACATTAGTCCCGGTT 59.901 38.462 0.00 0.00 0.00 4.44
3561 14123 6.285224 TCAATATACACATTAGTCCCGGTTG 58.715 40.000 0.00 0.00 0.00 3.77
3562 14124 3.553828 ATACACATTAGTCCCGGTTGG 57.446 47.619 0.00 0.00 0.00 3.77
3563 14125 1.354101 ACACATTAGTCCCGGTTGGA 58.646 50.000 0.00 0.00 42.41 3.53
3570 14132 3.794481 TCCCGGTTGGATCACGAA 58.206 55.556 0.00 0.00 38.61 3.85
3571 14133 1.294138 TCCCGGTTGGATCACGAAC 59.706 57.895 0.00 0.00 38.61 3.95
3572 14134 1.189524 TCCCGGTTGGATCACGAACT 61.190 55.000 0.00 0.00 38.61 3.01
3573 14135 1.019278 CCCGGTTGGATCACGAACTG 61.019 60.000 0.00 0.00 39.61 3.16
3574 14136 2.456000 CGGTTGGATCACGAACTGG 58.544 57.895 0.00 0.00 37.42 4.00
3575 14137 1.019278 CGGTTGGATCACGAACTGGG 61.019 60.000 0.00 0.00 37.42 4.45
3576 14138 0.323629 GGTTGGATCACGAACTGGGA 59.676 55.000 0.00 0.00 35.58 4.37
3577 14139 1.439679 GTTGGATCACGAACTGGGAC 58.560 55.000 0.00 0.00 33.17 4.46
3578 14140 1.002087 GTTGGATCACGAACTGGGACT 59.998 52.381 0.00 0.00 33.17 3.85
3579 14141 2.225382 TGGATCACGAACTGGGACTA 57.775 50.000 0.00 0.00 0.00 2.59
3580 14142 2.531771 TGGATCACGAACTGGGACTAA 58.468 47.619 0.00 0.00 0.00 2.24
3581 14143 3.104512 TGGATCACGAACTGGGACTAAT 58.895 45.455 0.00 0.00 0.00 1.73
3582 14144 3.118775 TGGATCACGAACTGGGACTAATG 60.119 47.826 0.00 0.00 0.00 1.90
3583 14145 3.118738 GGATCACGAACTGGGACTAATGT 60.119 47.826 0.00 0.00 0.00 2.71
3584 14146 3.313012 TCACGAACTGGGACTAATGTG 57.687 47.619 0.00 0.00 0.00 3.21
3585 14147 2.894765 TCACGAACTGGGACTAATGTGA 59.105 45.455 0.00 0.00 33.14 3.58
3586 14148 3.056821 TCACGAACTGGGACTAATGTGAG 60.057 47.826 0.00 0.00 31.99 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 8.671921 CCTCCATACATGCATAGATACAATTTC 58.328 37.037 0.00 0.00 0.00 2.17
32 33 4.872691 GCACCTCCATACATGCATAGATAC 59.127 45.833 0.00 0.00 38.00 2.24
39 40 3.786656 GAGCACCTCCATACATGCA 57.213 52.632 0.00 0.00 40.63 3.96
75 4776 1.873591 TCTCCGCTGAAAACTGAAAGC 59.126 47.619 0.00 0.00 37.60 3.51
90 4791 4.216472 TCGATCTCAATTATCTGGTCTCCG 59.784 45.833 0.00 0.00 0.00 4.63
123 4824 4.453480 AAGAACAGATGACCCAAAAGGA 57.547 40.909 0.00 0.00 39.89 3.36
124 4825 5.316987 AGTAAGAACAGATGACCCAAAAGG 58.683 41.667 0.00 0.00 43.78 3.11
175 4876 1.250840 GCAGGTTGGGGATTCACACC 61.251 60.000 0.00 0.00 43.64 4.16
204 4905 8.353684 GCTAGACTATAGATAGTTTCAGTGCAA 58.646 37.037 6.78 0.00 43.27 4.08
241 4953 5.064962 CAGAGAGCAATGTCCTCAGAATTTC 59.935 44.000 6.75 0.00 0.00 2.17
268 4980 2.863137 GCAGGAAATTTGCGAACACAAA 59.137 40.909 3.87 0.00 43.27 2.83
273 4985 2.726241 GTGAAGCAGGAAATTTGCGAAC 59.274 45.455 3.87 0.00 45.98 3.95
304 5016 1.176527 AGAATCACAACCGCAATGGG 58.823 50.000 0.00 0.00 44.64 4.00
305 5017 3.302365 AAAGAATCACAACCGCAATGG 57.698 42.857 0.00 0.00 46.41 3.16
311 5023 5.856126 TTAGCAGTAAAGAATCACAACCG 57.144 39.130 0.00 0.00 0.00 4.44
335 5047 2.324541 CCACAAATTGTTTCCCCCTGA 58.675 47.619 0.00 0.00 0.00 3.86
336 5048 2.046292 ACCACAAATTGTTTCCCCCTG 58.954 47.619 0.00 0.00 0.00 4.45
338 5050 3.618752 GCATACCACAAATTGTTTCCCCC 60.619 47.826 0.00 0.00 0.00 5.40
340 5052 4.244862 CAGCATACCACAAATTGTTTCCC 58.755 43.478 0.00 0.00 0.00 3.97
343 5055 4.333913 TGCAGCATACCACAAATTGTTT 57.666 36.364 0.00 0.00 0.00 2.83
345 5057 3.258872 ACATGCAGCATACCACAAATTGT 59.741 39.130 7.82 0.00 0.00 2.71
346 5058 3.852286 ACATGCAGCATACCACAAATTG 58.148 40.909 7.82 0.00 0.00 2.32
347 5059 5.857471 ATACATGCAGCATACCACAAATT 57.143 34.783 7.82 0.00 0.00 1.82
348 5060 5.360429 TCAATACATGCAGCATACCACAAAT 59.640 36.000 7.82 0.00 0.00 2.32
349 5061 4.704057 TCAATACATGCAGCATACCACAAA 59.296 37.500 7.82 0.00 0.00 2.83
350 5062 4.096231 GTCAATACATGCAGCATACCACAA 59.904 41.667 7.82 0.00 0.00 3.33
353 5065 2.871633 CGTCAATACATGCAGCATACCA 59.128 45.455 7.82 0.00 0.00 3.25
354 5066 2.872245 ACGTCAATACATGCAGCATACC 59.128 45.455 7.82 0.00 0.00 2.73
355 5067 3.303329 CCACGTCAATACATGCAGCATAC 60.303 47.826 7.82 0.23 0.00 2.39
357 5069 1.672363 CCACGTCAATACATGCAGCAT 59.328 47.619 0.52 0.52 0.00 3.79
359 5071 1.368641 TCCACGTCAATACATGCAGC 58.631 50.000 0.00 0.00 0.00 5.25
363 5075 5.801350 AACTGAATCCACGTCAATACATG 57.199 39.130 0.00 0.00 0.00 3.21
366 5078 6.481954 AGAAAACTGAATCCACGTCAATAC 57.518 37.500 0.00 0.00 0.00 1.89
367 5079 7.383687 AGTAGAAAACTGAATCCACGTCAATA 58.616 34.615 0.00 0.00 36.93 1.90
446 5567 5.759273 AGAGTAACTAGACGAAGCATACGAT 59.241 40.000 0.00 0.00 34.70 3.73
472 5619 5.483937 TCGGCATATAAGACAATGGGACTAT 59.516 40.000 0.00 0.00 0.00 2.12
476 5623 3.389656 TGTCGGCATATAAGACAATGGGA 59.610 43.478 0.00 0.00 41.30 4.37
478 5625 4.126437 TGTGTCGGCATATAAGACAATGG 58.874 43.478 0.00 0.00 45.04 3.16
500 5648 5.625150 CTTAAGGGGATTGGAAGATCGAAT 58.375 41.667 0.00 0.00 0.00 3.34
517 5669 6.811253 TGGTACTGTATTGTTTGCTTAAGG 57.189 37.500 4.29 0.00 0.00 2.69
535 5687 8.419076 TTCTTTTTCTCTTGCAAAAATGGTAC 57.581 30.769 0.00 0.00 33.37 3.34
537 5689 6.539826 CCTTCTTTTTCTCTTGCAAAAATGGT 59.460 34.615 0.00 0.00 33.37 3.55
538 5690 6.762661 TCCTTCTTTTTCTCTTGCAAAAATGG 59.237 34.615 0.00 1.70 33.37 3.16
567 5719 5.890419 AGAAGATGATTCCCAGGAAAACATC 59.110 40.000 25.62 25.62 43.47 3.06
568 5720 5.835582 AGAAGATGATTCCCAGGAAAACAT 58.164 37.500 16.78 16.78 37.69 2.71
569 5721 5.261040 AGAAGATGATTCCCAGGAAAACA 57.739 39.130 2.65 7.55 37.69 2.83
570 5722 5.126222 GGAAGAAGATGATTCCCAGGAAAAC 59.874 44.000 2.65 2.02 39.29 2.43
596 5753 0.811915 CACCTCATTCGTCCTCGTCT 59.188 55.000 0.00 0.00 38.33 4.18
639 5823 2.356069 GGAAAAGATAAGGAAGGCAGCG 59.644 50.000 0.00 0.00 0.00 5.18
640 5824 3.379688 CAGGAAAAGATAAGGAAGGCAGC 59.620 47.826 0.00 0.00 0.00 5.25
642 5826 4.927267 TCAGGAAAAGATAAGGAAGGCA 57.073 40.909 0.00 0.00 0.00 4.75
643 5827 5.946377 TCTTTCAGGAAAAGATAAGGAAGGC 59.054 40.000 0.00 0.00 46.64 4.35
654 5838 5.617751 CGCCACATAGTTCTTTCAGGAAAAG 60.618 44.000 0.00 0.00 44.89 2.27
655 5839 4.215399 CGCCACATAGTTCTTTCAGGAAAA 59.785 41.667 0.00 0.00 0.00 2.29
656 5840 3.751175 CGCCACATAGTTCTTTCAGGAAA 59.249 43.478 0.00 0.00 0.00 3.13
657 5841 3.334691 CGCCACATAGTTCTTTCAGGAA 58.665 45.455 0.00 0.00 0.00 3.36
658 5842 2.935238 GCGCCACATAGTTCTTTCAGGA 60.935 50.000 0.00 0.00 0.00 3.86
659 5843 1.398390 GCGCCACATAGTTCTTTCAGG 59.602 52.381 0.00 0.00 0.00 3.86
660 5844 2.350522 AGCGCCACATAGTTCTTTCAG 58.649 47.619 2.29 0.00 0.00 3.02
661 5845 2.472695 AGCGCCACATAGTTCTTTCA 57.527 45.000 2.29 0.00 0.00 2.69
662 5846 3.492313 CAAAGCGCCACATAGTTCTTTC 58.508 45.455 2.29 0.00 0.00 2.62
663 5847 2.228822 CCAAAGCGCCACATAGTTCTTT 59.771 45.455 2.29 0.00 0.00 2.52
664 5848 1.812571 CCAAAGCGCCACATAGTTCTT 59.187 47.619 2.29 0.00 0.00 2.52
665 5849 1.453155 CCAAAGCGCCACATAGTTCT 58.547 50.000 2.29 0.00 0.00 3.01
666 5850 0.179163 GCCAAAGCGCCACATAGTTC 60.179 55.000 2.29 0.00 0.00 3.01
667 5851 0.609131 AGCCAAAGCGCCACATAGTT 60.609 50.000 2.29 0.00 46.67 2.24
668 5852 1.002134 AGCCAAAGCGCCACATAGT 60.002 52.632 2.29 0.00 46.67 2.12
669 5853 1.026182 TGAGCCAAAGCGCCACATAG 61.026 55.000 2.29 0.00 46.67 2.23
670 5854 0.394216 ATGAGCCAAAGCGCCACATA 60.394 50.000 2.29 0.00 46.67 2.29
671 5855 1.660560 GATGAGCCAAAGCGCCACAT 61.661 55.000 2.29 0.00 46.67 3.21
672 5856 2.282391 ATGAGCCAAAGCGCCACA 60.282 55.556 2.29 0.00 46.67 4.17
673 5857 2.486966 GATGAGCCAAAGCGCCAC 59.513 61.111 2.29 0.00 46.67 5.01
674 5858 2.514510 TACGATGAGCCAAAGCGCCA 62.515 55.000 2.29 0.00 46.67 5.69
675 5859 1.160329 ATACGATGAGCCAAAGCGCC 61.160 55.000 2.29 0.00 46.67 6.53
676 5860 0.041839 CATACGATGAGCCAAAGCGC 60.042 55.000 0.00 0.00 46.67 5.92
677 5861 1.570813 TCATACGATGAGCCAAAGCG 58.429 50.000 0.00 0.00 46.67 4.68
841 6035 2.368105 CGTGTGCTCTCGTGAGTGC 61.368 63.158 15.37 15.09 45.28 4.40
910 6104 4.069304 TGCAGGTGGTTGTGTAAAGTATC 58.931 43.478 0.00 0.00 0.00 2.24
913 6107 2.021457 GTGCAGGTGGTTGTGTAAAGT 58.979 47.619 0.00 0.00 0.00 2.66
932 6135 2.717639 ACTTCTCTTGCTTGTGTGGT 57.282 45.000 0.00 0.00 0.00 4.16
941 6144 3.608008 GCTGCTGTGTTTACTTCTCTTGC 60.608 47.826 0.00 0.00 0.00 4.01
954 6162 0.979665 ATCCACTAGTGCTGCTGTGT 59.020 50.000 17.86 0.00 0.00 3.72
955 6163 2.105006 AATCCACTAGTGCTGCTGTG 57.895 50.000 17.86 2.03 0.00 3.66
970 6182 3.254892 GACCTTCTCAGTCGTGAAATCC 58.745 50.000 0.00 0.00 30.14 3.01
981 6193 0.891373 TCTTGAGCCGACCTTCTCAG 59.109 55.000 0.00 0.00 40.07 3.35
989 6201 0.741221 GTGGTCCATCTTGAGCCGAC 60.741 60.000 0.00 0.00 31.79 4.79
995 6207 0.770499 TGCTTGGTGGTCCATCTTGA 59.230 50.000 3.19 0.00 43.91 3.02
1165 6404 2.346365 GGTTCCGGTGTGACCCTC 59.654 66.667 0.00 0.00 33.75 4.30
1268 6507 4.689484 CAGTCTGCTGGTGGTCAG 57.311 61.111 0.00 0.00 46.03 3.51
1337 6576 1.836999 ATAGGTGCCACCAGTCGCAA 61.837 55.000 17.80 0.00 41.95 4.85
1338 6577 2.290287 ATAGGTGCCACCAGTCGCA 61.290 57.895 17.80 0.00 41.95 5.10
1344 6583 2.938243 TGCCCATAGGTGCCACCA 60.938 61.111 17.80 2.31 41.95 4.17
1397 6636 2.940890 ATAGGTGCCATTGGTCGCCG 62.941 60.000 18.08 0.00 35.59 6.46
1398 6637 1.152963 ATAGGTGCCATTGGTCGCC 60.153 57.895 17.07 17.07 32.40 5.54
1399 6638 1.447317 CCATAGGTGCCATTGGTCGC 61.447 60.000 4.26 3.56 0.00 5.19
1400 6639 0.819259 CCCATAGGTGCCATTGGTCG 60.819 60.000 4.26 0.00 0.00 4.79
1401 6640 0.468029 CCCCATAGGTGCCATTGGTC 60.468 60.000 4.26 0.00 0.00 4.02
1402 6641 0.923729 TCCCCATAGGTGCCATTGGT 60.924 55.000 4.26 0.00 36.75 3.67
1403 6642 0.178981 CTCCCCATAGGTGCCATTGG 60.179 60.000 0.00 0.00 36.75 3.16
1404 6643 3.426903 CTCCCCATAGGTGCCATTG 57.573 57.895 0.00 0.00 36.75 2.82
1410 6649 2.063979 TCCGTGCTCCCCATAGGTG 61.064 63.158 0.00 0.00 36.75 4.00
1411 6650 2.064581 GTCCGTGCTCCCCATAGGT 61.065 63.158 0.00 0.00 36.75 3.08
1412 6651 1.410850 ATGTCCGTGCTCCCCATAGG 61.411 60.000 0.00 0.00 0.00 2.57
1413 6652 1.000955 GTATGTCCGTGCTCCCCATAG 59.999 57.143 0.00 0.00 0.00 2.23
1414 6653 1.045407 GTATGTCCGTGCTCCCCATA 58.955 55.000 0.00 0.00 0.00 2.74
1415 6654 1.696097 GGTATGTCCGTGCTCCCCAT 61.696 60.000 0.00 0.00 0.00 4.00
1416 6655 2.363975 GGTATGTCCGTGCTCCCCA 61.364 63.158 0.00 0.00 0.00 4.96
1417 6656 2.504519 GGTATGTCCGTGCTCCCC 59.495 66.667 0.00 0.00 0.00 4.81
1443 6682 4.814294 CCGTAGCTGCCACCGGTC 62.814 72.222 2.59 0.00 35.78 4.79
1447 6686 4.162690 CTCCCCGTAGCTGCCACC 62.163 72.222 0.00 0.00 0.00 4.61
1448 6687 4.840005 GCTCCCCGTAGCTGCCAC 62.840 72.222 0.00 0.00 39.50 5.01
1450 6689 3.622060 TTTGCTCCCCGTAGCTGCC 62.622 63.158 0.00 0.00 43.19 4.85
1451 6690 2.046314 TTTGCTCCCCGTAGCTGC 60.046 61.111 0.00 0.00 43.19 5.25
1452 6691 0.741221 GTCTTTGCTCCCCGTAGCTG 60.741 60.000 0.00 0.00 43.19 4.24
1453 6692 1.192146 TGTCTTTGCTCCCCGTAGCT 61.192 55.000 0.00 0.00 43.19 3.32
1454 6693 0.107654 ATGTCTTTGCTCCCCGTAGC 60.108 55.000 0.00 0.00 43.08 3.58
1455 6694 2.483188 GGTATGTCTTTGCTCCCCGTAG 60.483 54.545 0.00 0.00 0.00 3.51
1456 6695 1.483415 GGTATGTCTTTGCTCCCCGTA 59.517 52.381 0.00 0.00 0.00 4.02
1457 6696 0.252197 GGTATGTCTTTGCTCCCCGT 59.748 55.000 0.00 0.00 0.00 5.28
1458 6697 0.810031 CGGTATGTCTTTGCTCCCCG 60.810 60.000 0.00 0.00 0.00 5.73
1459 6698 0.463833 CCGGTATGTCTTTGCTCCCC 60.464 60.000 0.00 0.00 0.00 4.81
1460 6699 0.539986 TCCGGTATGTCTTTGCTCCC 59.460 55.000 0.00 0.00 0.00 4.30
1461 6700 1.207329 ACTCCGGTATGTCTTTGCTCC 59.793 52.381 0.00 0.00 0.00 4.70
1462 6701 2.094182 TCACTCCGGTATGTCTTTGCTC 60.094 50.000 0.00 0.00 0.00 4.26
1463 6702 1.899814 TCACTCCGGTATGTCTTTGCT 59.100 47.619 0.00 0.00 0.00 3.91
1464 6703 2.000447 GTCACTCCGGTATGTCTTTGC 59.000 52.381 0.00 0.00 0.00 3.68
1465 6704 2.618053 GGTCACTCCGGTATGTCTTTG 58.382 52.381 0.00 0.00 0.00 2.77
1488 6727 4.735132 ATGTCGTGCGTCCCCGTG 62.735 66.667 0.00 0.00 36.15 4.94
1489 6728 4.430765 GATGTCGTGCGTCCCCGT 62.431 66.667 0.00 0.00 36.15 5.28
1497 6736 2.506217 TTCTCGCCGATGTCGTGC 60.506 61.111 1.44 4.10 37.74 5.34
1498 6737 0.456142 TTCTTCTCGCCGATGTCGTG 60.456 55.000 1.44 0.00 37.74 4.35
1499 6738 0.179161 CTTCTTCTCGCCGATGTCGT 60.179 55.000 1.44 0.00 37.74 4.34
1500 6739 0.098905 TCTTCTTCTCGCCGATGTCG 59.901 55.000 0.00 0.00 39.44 4.35
1501 6740 1.833860 CTCTTCTTCTCGCCGATGTC 58.166 55.000 0.00 0.00 0.00 3.06
1502 6741 0.179124 GCTCTTCTTCTCGCCGATGT 60.179 55.000 0.00 0.00 0.00 3.06
1503 6742 0.873743 GGCTCTTCTTCTCGCCGATG 60.874 60.000 0.00 0.00 32.22 3.84
1504 6743 1.040339 AGGCTCTTCTTCTCGCCGAT 61.040 55.000 0.00 0.00 46.85 4.18
1505 6744 1.658686 GAGGCTCTTCTTCTCGCCGA 61.659 60.000 7.40 0.00 46.85 5.54
1506 6745 1.226831 GAGGCTCTTCTTCTCGCCG 60.227 63.158 7.40 0.00 46.85 6.46
1507 6746 0.463620 ATGAGGCTCTTCTTCTCGCC 59.536 55.000 16.72 0.00 42.79 5.54
1508 6747 1.569708 CATGAGGCTCTTCTTCTCGC 58.430 55.000 16.72 0.00 0.00 5.03
1509 6748 1.753649 TCCATGAGGCTCTTCTTCTCG 59.246 52.381 16.72 0.00 33.74 4.04
1510 6749 3.030291 TCTCCATGAGGCTCTTCTTCTC 58.970 50.000 16.72 0.00 33.74 2.87
1511 6750 3.113191 TCTCCATGAGGCTCTTCTTCT 57.887 47.619 16.72 0.00 33.74 2.85
1512 6751 3.055530 TGTTCTCCATGAGGCTCTTCTTC 60.056 47.826 16.72 0.08 33.74 2.87
1513 6752 2.909006 TGTTCTCCATGAGGCTCTTCTT 59.091 45.455 16.72 0.00 33.74 2.52
1514 6753 2.544721 TGTTCTCCATGAGGCTCTTCT 58.455 47.619 16.72 0.00 33.74 2.85
1515 6754 3.118482 TGATGTTCTCCATGAGGCTCTTC 60.118 47.826 16.72 0.00 32.56 2.87
1516 6755 2.842496 TGATGTTCTCCATGAGGCTCTT 59.158 45.455 16.72 6.57 32.56 2.85
1517 6756 2.475155 TGATGTTCTCCATGAGGCTCT 58.525 47.619 16.72 0.00 32.56 4.09
1518 6757 2.996249 TGATGTTCTCCATGAGGCTC 57.004 50.000 7.79 7.79 32.56 4.70
1519 6758 2.092538 CCTTGATGTTCTCCATGAGGCT 60.093 50.000 0.00 0.00 32.56 4.58
1520 6759 2.092753 TCCTTGATGTTCTCCATGAGGC 60.093 50.000 0.00 0.00 35.14 4.70
1521 6760 3.453717 TCTCCTTGATGTTCTCCATGAGG 59.546 47.826 0.00 0.00 35.91 3.86
1522 6761 4.750021 TCTCCTTGATGTTCTCCATGAG 57.250 45.455 0.00 0.00 32.56 2.90
1523 6762 4.624843 GCTTCTCCTTGATGTTCTCCATGA 60.625 45.833 0.00 0.00 32.56 3.07
1524 6763 3.626670 GCTTCTCCTTGATGTTCTCCATG 59.373 47.826 0.00 0.00 32.56 3.66
1525 6764 3.522750 AGCTTCTCCTTGATGTTCTCCAT 59.477 43.478 0.00 0.00 36.13 3.41
1526 6765 2.909006 AGCTTCTCCTTGATGTTCTCCA 59.091 45.455 0.00 0.00 0.00 3.86
1527 6766 3.530535 GAGCTTCTCCTTGATGTTCTCC 58.469 50.000 0.00 0.00 30.92 3.71
1528 6767 3.530535 GGAGCTTCTCCTTGATGTTCTC 58.469 50.000 5.65 0.00 46.41 2.87
1529 6768 3.625649 GGAGCTTCTCCTTGATGTTCT 57.374 47.619 5.65 0.00 46.41 3.01
1540 6779 2.270527 GCCACCAGGGAGCTTCTC 59.729 66.667 0.00 0.00 40.01 2.87
1541 6780 3.334054 GGCCACCAGGGAGCTTCT 61.334 66.667 0.00 0.00 40.01 2.85
1551 6790 1.530419 GTTGTCACCATGGCCACCA 60.530 57.895 8.16 0.23 38.19 4.17
1562 6801 0.814010 AGCGGTCTGTTGGTTGTCAC 60.814 55.000 0.00 0.00 0.00 3.67
1572 6811 2.603473 TAGGTGCCAGCGGTCTGT 60.603 61.111 0.00 0.00 38.66 3.41
1588 6827 3.702048 GTGTCCCTGCTGCCCGTA 61.702 66.667 0.00 0.00 0.00 4.02
1754 9299 2.357517 CGGTCTGCTGGTGGTCAC 60.358 66.667 0.00 0.00 0.00 3.67
1842 9387 2.280119 GTGTGTCCGTGCTGCTCA 60.280 61.111 0.00 0.00 0.00 4.26
1887 9432 3.078836 CCCTTCTTCCCGCCGGTA 61.079 66.667 1.90 0.00 0.00 4.02
1895 9698 0.462759 CTCCATGACGCCCTTCTTCC 60.463 60.000 0.00 0.00 0.00 3.46
1935 11514 1.453015 GTTGTCACTGTGGCCACCA 60.453 57.895 32.62 19.78 0.00 4.17
1936 11515 2.193536 GGTTGTCACTGTGGCCACC 61.194 63.158 32.62 18.30 30.42 4.61
1937 11516 1.447317 CTGGTTGTCACTGTGGCCAC 61.447 60.000 29.67 29.67 0.00 5.01
1938 11517 1.152984 CTGGTTGTCACTGTGGCCA 60.153 57.895 10.27 0.00 0.00 5.36
1939 11518 2.555547 GCTGGTTGTCACTGTGGCC 61.556 63.158 10.27 0.00 0.00 5.36
1940 11519 1.789078 CTGCTGGTTGTCACTGTGGC 61.789 60.000 5.24 5.24 0.00 5.01
1941 11520 0.179048 TCTGCTGGTTGTCACTGTGG 60.179 55.000 8.11 0.00 0.00 4.17
1942 11521 0.940126 GTCTGCTGGTTGTCACTGTG 59.060 55.000 0.17 0.17 0.00 3.66
1943 11522 0.179045 GGTCTGCTGGTTGTCACTGT 60.179 55.000 0.00 0.00 0.00 3.55
1944 11523 1.224069 CGGTCTGCTGGTTGTCACTG 61.224 60.000 0.00 0.00 0.00 3.66
1945 11524 1.069765 CGGTCTGCTGGTTGTCACT 59.930 57.895 0.00 0.00 0.00 3.41
1946 11525 1.961277 CCGGTCTGCTGGTTGTCAC 60.961 63.158 0.00 0.00 36.39 3.67
1947 11526 2.425592 CCGGTCTGCTGGTTGTCA 59.574 61.111 0.00 0.00 36.39 3.58
1953 11532 4.767255 GCTCCACCGGTCTGCTGG 62.767 72.222 2.59 1.96 46.63 4.85
1954 11533 4.767255 GGCTCCACCGGTCTGCTG 62.767 72.222 2.59 0.00 0.00 4.41
1955 11534 3.602075 TAGGCTCCACCGGTCTGCT 62.602 63.158 2.59 2.51 46.52 4.24
1956 11535 3.075005 TAGGCTCCACCGGTCTGC 61.075 66.667 2.59 9.48 46.52 4.26
1957 11536 2.893398 GTAGGCTCCACCGGTCTG 59.107 66.667 2.59 0.00 46.52 3.51
1958 11537 2.754658 CGTAGGCTCCACCGGTCT 60.755 66.667 2.59 0.00 46.52 3.85
1959 11538 2.753043 TCGTAGGCTCCACCGGTC 60.753 66.667 2.59 0.00 46.52 4.79
1960 11539 2.754658 CTCGTAGGCTCCACCGGT 60.755 66.667 0.00 0.00 46.52 5.28
1961 11540 4.208686 GCTCGTAGGCTCCACCGG 62.209 72.222 0.00 0.00 46.52 5.28
1962 11541 3.417275 CTGCTCGTAGGCTCCACCG 62.417 68.421 0.00 0.00 46.52 4.94
1963 11542 2.496817 CTGCTCGTAGGCTCCACC 59.503 66.667 0.00 0.00 39.61 4.61
1964 11543 2.202810 GCTGCTCGTAGGCTCCAC 60.203 66.667 0.00 0.00 0.00 4.02
1965 11544 2.679996 TGCTGCTCGTAGGCTCCA 60.680 61.111 0.00 0.00 0.00 3.86
1966 11545 2.105930 CTGCTGCTCGTAGGCTCC 59.894 66.667 0.00 0.00 0.00 4.70
1967 11546 2.105930 CCTGCTGCTCGTAGGCTC 59.894 66.667 0.00 0.00 38.72 4.70
1968 11547 3.465403 CCCTGCTGCTCGTAGGCT 61.465 66.667 0.00 0.00 43.52 4.58
1969 11548 3.461773 TCCCTGCTGCTCGTAGGC 61.462 66.667 0.00 0.00 43.52 3.93
1970 11549 2.351244 TGTCCCTGCTGCTCGTAGG 61.351 63.158 0.00 0.00 44.38 3.18
1971 11550 1.153745 GTGTCCCTGCTGCTCGTAG 60.154 63.158 0.00 0.00 0.00 3.51
1972 11551 1.906333 TGTGTCCCTGCTGCTCGTA 60.906 57.895 0.00 0.00 0.00 3.43
1973 11552 3.233980 TGTGTCCCTGCTGCTCGT 61.234 61.111 0.00 0.00 0.00 4.18
1974 11553 2.740055 GTGTGTCCCTGCTGCTCG 60.740 66.667 0.00 0.00 0.00 5.03
1975 11554 2.359230 GGTGTGTCCCTGCTGCTC 60.359 66.667 0.00 0.00 0.00 4.26
1976 11555 4.320456 CGGTGTGTCCCTGCTGCT 62.320 66.667 0.00 0.00 0.00 4.24
2232 11811 4.832608 GTCCCCGTGCCGGTCATC 62.833 72.222 1.90 0.00 46.80 2.92
2247 11826 4.961511 TCGCCAGTGCCGTGTGTC 62.962 66.667 0.00 0.00 0.00 3.67
2248 11827 4.969196 CTCGCCAGTGCCGTGTGT 62.969 66.667 0.00 0.00 0.00 3.72
2249 11828 4.662961 TCTCGCCAGTGCCGTGTG 62.663 66.667 0.00 0.00 0.00 3.82
2250 11829 3.865929 CTTCTCGCCAGTGCCGTGT 62.866 63.158 0.00 0.00 0.00 4.49
2251 11830 3.114616 CTTCTCGCCAGTGCCGTG 61.115 66.667 0.00 0.00 0.00 4.94
2252 11831 2.771763 CTTCTTCTCGCCAGTGCCGT 62.772 60.000 0.00 0.00 0.00 5.68
2253 11832 2.048222 TTCTTCTCGCCAGTGCCG 60.048 61.111 0.00 0.00 0.00 5.69
2254 11833 1.743252 CCTTCTTCTCGCCAGTGCC 60.743 63.158 0.00 0.00 0.00 5.01
2255 11834 2.394563 GCCTTCTTCTCGCCAGTGC 61.395 63.158 0.00 0.00 0.00 4.40
2256 11835 1.743252 GGCCTTCTTCTCGCCAGTG 60.743 63.158 0.00 0.00 42.52 3.66
2257 11836 2.665603 GGCCTTCTTCTCGCCAGT 59.334 61.111 0.00 0.00 42.52 4.00
2258 11837 2.510238 CGGCCTTCTTCTCGCCAG 60.510 66.667 0.00 0.00 43.17 4.85
2259 11838 3.296709 GACGGCCTTCTTCTCGCCA 62.297 63.158 0.00 0.00 43.17 5.69
2260 11839 2.509561 GACGGCCTTCTTCTCGCC 60.510 66.667 0.00 0.00 39.41 5.54
2261 11840 1.153549 ATGACGGCCTTCTTCTCGC 60.154 57.895 11.01 0.00 0.00 5.03
2262 11841 0.807667 CCATGACGGCCTTCTTCTCG 60.808 60.000 11.01 0.00 0.00 4.04
2263 11842 0.537188 TCCATGACGGCCTTCTTCTC 59.463 55.000 11.01 0.00 33.14 2.87
2264 11843 0.539051 CTCCATGACGGCCTTCTTCT 59.461 55.000 11.01 0.00 33.14 2.85
2265 11844 0.537188 TCTCCATGACGGCCTTCTTC 59.463 55.000 11.01 0.00 33.14 2.87
2266 11845 0.984230 TTCTCCATGACGGCCTTCTT 59.016 50.000 11.01 0.81 33.14 2.52
2267 11846 0.250513 GTTCTCCATGACGGCCTTCT 59.749 55.000 11.01 0.00 33.14 2.85
2268 11847 0.036388 TGTTCTCCATGACGGCCTTC 60.036 55.000 1.37 1.37 33.14 3.46
2269 11848 0.620556 ATGTTCTCCATGACGGCCTT 59.379 50.000 0.00 0.00 30.69 4.35
2270 11849 0.179000 GATGTTCTCCATGACGGCCT 59.821 55.000 0.00 0.00 32.56 5.19
2271 11850 0.107703 TGATGTTCTCCATGACGGCC 60.108 55.000 0.00 0.00 32.56 6.13
2272 11851 1.667724 CTTGATGTTCTCCATGACGGC 59.332 52.381 0.00 0.00 32.56 5.68
2273 11852 2.093500 TCCTTGATGTTCTCCATGACGG 60.093 50.000 0.00 0.00 32.56 4.79
2274 11853 2.932614 GTCCTTGATGTTCTCCATGACG 59.067 50.000 0.00 0.00 32.56 4.35
2275 11854 3.942829 TGTCCTTGATGTTCTCCATGAC 58.057 45.455 0.00 0.00 32.56 3.06
2276 11855 4.582869 CTTGTCCTTGATGTTCTCCATGA 58.417 43.478 0.00 0.00 32.56 3.07
2277 11856 3.128242 GCTTGTCCTTGATGTTCTCCATG 59.872 47.826 0.00 0.00 32.56 3.66
2278 11857 3.009916 AGCTTGTCCTTGATGTTCTCCAT 59.990 43.478 0.00 0.00 36.13 3.41
2279 11858 2.373169 AGCTTGTCCTTGATGTTCTCCA 59.627 45.455 0.00 0.00 0.00 3.86
2280 11859 3.006247 GAGCTTGTCCTTGATGTTCTCC 58.994 50.000 0.00 0.00 0.00 3.71
2281 11860 3.006247 GGAGCTTGTCCTTGATGTTCTC 58.994 50.000 0.00 0.00 42.99 2.87
2282 11861 2.290577 GGGAGCTTGTCCTTGATGTTCT 60.291 50.000 0.00 0.00 46.06 3.01
2283 11862 2.087646 GGGAGCTTGTCCTTGATGTTC 58.912 52.381 0.00 0.00 46.06 3.18
2284 11863 1.707427 AGGGAGCTTGTCCTTGATGTT 59.293 47.619 0.00 0.00 46.06 2.71
2285 11864 1.366319 AGGGAGCTTGTCCTTGATGT 58.634 50.000 0.00 0.00 46.06 3.06
2290 11869 1.763770 CACCAGGGAGCTTGTCCTT 59.236 57.895 2.01 0.00 46.06 3.36
2291 11870 2.227036 CCACCAGGGAGCTTGTCCT 61.227 63.158 0.00 0.00 46.06 3.85
2292 11871 2.352805 CCACCAGGGAGCTTGTCC 59.647 66.667 0.00 0.00 46.10 4.02
2293 11872 2.360475 GCCACCAGGGAGCTTGTC 60.360 66.667 0.00 0.00 40.01 3.18
2294 11873 3.971702 GGCCACCAGGGAGCTTGT 61.972 66.667 0.00 0.00 40.01 3.16
2295 11874 3.970410 TGGCCACCAGGGAGCTTG 61.970 66.667 0.00 0.00 40.01 4.01
2296 11875 3.971702 GTGGCCACCAGGGAGCTT 61.972 66.667 26.31 0.00 40.01 3.74
2403 12519 0.599991 CAGTGTTACCGTGCTGCTCA 60.600 55.000 0.00 0.00 0.00 4.26
2405 12521 1.301716 CCAGTGTTACCGTGCTGCT 60.302 57.895 0.00 0.00 0.00 4.24
2412 12528 1.355971 CGGTCATTCCAGTGTTACCG 58.644 55.000 0.00 0.00 43.20 4.02
2415 12531 0.687920 TGCCGGTCATTCCAGTGTTA 59.312 50.000 1.90 0.00 35.57 2.41
2416 12532 0.889186 GTGCCGGTCATTCCAGTGTT 60.889 55.000 1.90 0.00 35.57 3.32
2490 12666 1.198759 TCCCAGTGCCAGTAGTTCCC 61.199 60.000 0.00 0.00 0.00 3.97
2496 12672 1.752198 GTGTGTCCCAGTGCCAGTA 59.248 57.895 0.00 0.00 0.00 2.74
2571 12747 2.746359 GCTCAGTGCTGTCCAGGT 59.254 61.111 0.00 0.00 38.95 4.00
2744 12928 2.287427 ACGACAGAGTGTAAACAGACGG 60.287 50.000 0.00 0.00 0.00 4.79
2785 12970 7.021790 GTCGGATAAGATGGACAAAAGAAAAC 58.978 38.462 0.00 0.00 0.00 2.43
2790 12975 5.292101 GTCTGTCGGATAAGATGGACAAAAG 59.708 44.000 0.00 0.00 38.77 2.27
2829 13017 1.276421 ACCCGGACTTTGATCTGACAG 59.724 52.381 0.73 0.00 0.00 3.51
2866 13054 2.617788 GGTCTGTAATGTGGTCATGCCA 60.618 50.000 4.93 4.93 46.95 4.92
2867 13055 2.017049 GGTCTGTAATGTGGTCATGCC 58.983 52.381 0.00 0.00 34.19 4.40
2868 13056 2.710377 TGGTCTGTAATGTGGTCATGC 58.290 47.619 0.00 0.00 34.19 4.06
2869 13057 3.440173 GGTTGGTCTGTAATGTGGTCATG 59.560 47.826 0.00 0.00 34.19 3.07
2870 13058 3.561313 GGGTTGGTCTGTAATGTGGTCAT 60.561 47.826 0.00 0.00 35.59 3.06
2871 13059 2.224670 GGGTTGGTCTGTAATGTGGTCA 60.225 50.000 0.00 0.00 0.00 4.02
2910 13098 2.356313 AGGTTGTGCTGCGACTCG 60.356 61.111 0.00 0.00 0.00 4.18
3016 13204 4.359971 TCGTAATCGTTAGCACTTAGCA 57.640 40.909 0.00 0.00 41.24 3.49
3017 13205 5.691508 TTTCGTAATCGTTAGCACTTAGC 57.308 39.130 0.00 0.00 40.00 3.09
3019 13207 6.529125 CCTCTTTTCGTAATCGTTAGCACTTA 59.471 38.462 0.00 0.00 38.33 2.24
3020 13208 5.347907 CCTCTTTTCGTAATCGTTAGCACTT 59.652 40.000 0.00 0.00 38.33 3.16
3022 13210 4.624452 ACCTCTTTTCGTAATCGTTAGCAC 59.376 41.667 0.00 0.00 38.33 4.40
3051 13239 0.171231 GTCTCGGCCATTTTGCTTCC 59.829 55.000 2.24 0.00 0.00 3.46
3151 13370 3.804063 GCGAGGATTTAGAGGGTGATTCC 60.804 52.174 0.00 0.00 0.00 3.01
3163 13382 5.168647 TGGGTAAAAAGAGCGAGGATTTA 57.831 39.130 0.00 0.00 0.00 1.40
3245 13475 6.183360 CCATTTCTTTTACCGCTCTGAAGTAG 60.183 42.308 0.00 0.00 0.00 2.57
3252 13482 3.939592 GCTACCATTTCTTTTACCGCTCT 59.060 43.478 0.00 0.00 0.00 4.09
3277 13538 2.575532 CTTGGAAAGTCCTTCAGCACA 58.424 47.619 0.00 0.00 39.70 4.57
3409 13971 1.291877 CTTTCTCCGACGGCACCTTG 61.292 60.000 9.66 0.00 0.00 3.61
3410 13972 1.004918 CTTTCTCCGACGGCACCTT 60.005 57.895 9.66 0.00 0.00 3.50
3418 13980 2.046217 GGTGGGGCTTTCTCCGAC 60.046 66.667 0.00 0.00 33.11 4.79
3422 13984 1.833787 TACACCGGTGGGGCTTTCTC 61.834 60.000 36.47 0.00 40.62 2.87
3424 13986 1.376812 CTACACCGGTGGGGCTTTC 60.377 63.158 36.47 0.00 40.62 2.62
3433 13995 4.016706 GCTGGCACCTACACCGGT 62.017 66.667 0.00 0.00 37.93 5.28
3505 14067 5.536260 GAAAGTCCCGTTTTCTACTAGTGT 58.464 41.667 5.39 0.00 32.98 3.55
3506 14068 4.620184 CGAAAGTCCCGTTTTCTACTAGTG 59.380 45.833 5.39 0.00 33.44 2.74
3507 14069 4.279420 ACGAAAGTCCCGTTTTCTACTAGT 59.721 41.667 0.00 0.00 44.19 2.57
3508 14070 4.802999 ACGAAAGTCCCGTTTTCTACTAG 58.197 43.478 0.00 0.00 44.19 2.57
3509 14071 4.853924 ACGAAAGTCCCGTTTTCTACTA 57.146 40.909 0.00 0.00 44.19 1.82
3510 14072 3.740631 ACGAAAGTCCCGTTTTCTACT 57.259 42.857 0.00 0.00 44.19 2.57
3524 14086 7.359262 TGTGTATATTGAGTTTGGACGAAAG 57.641 36.000 0.00 0.00 0.00 2.62
3525 14087 7.915293 ATGTGTATATTGAGTTTGGACGAAA 57.085 32.000 0.00 0.00 0.00 3.46
3526 14088 7.915293 AATGTGTATATTGAGTTTGGACGAA 57.085 32.000 0.00 0.00 0.00 3.85
3527 14089 8.255206 ACTAATGTGTATATTGAGTTTGGACGA 58.745 33.333 0.00 0.00 0.00 4.20
3528 14090 8.420374 ACTAATGTGTATATTGAGTTTGGACG 57.580 34.615 0.00 0.00 0.00 4.79
3529 14091 8.827677 GGACTAATGTGTATATTGAGTTTGGAC 58.172 37.037 0.00 0.00 0.00 4.02
3530 14092 7.990886 GGGACTAATGTGTATATTGAGTTTGGA 59.009 37.037 0.00 0.00 0.00 3.53
3531 14093 7.042051 CGGGACTAATGTGTATATTGAGTTTGG 60.042 40.741 0.00 0.00 0.00 3.28
3532 14094 7.042051 CCGGGACTAATGTGTATATTGAGTTTG 60.042 40.741 0.00 0.00 0.00 2.93
3533 14095 6.990349 CCGGGACTAATGTGTATATTGAGTTT 59.010 38.462 0.00 0.00 0.00 2.66
3534 14096 6.099269 ACCGGGACTAATGTGTATATTGAGTT 59.901 38.462 6.32 0.00 0.00 3.01
3535 14097 5.601313 ACCGGGACTAATGTGTATATTGAGT 59.399 40.000 6.32 0.00 0.00 3.41
3536 14098 6.097915 ACCGGGACTAATGTGTATATTGAG 57.902 41.667 6.32 0.00 0.00 3.02
3537 14099 6.285224 CAACCGGGACTAATGTGTATATTGA 58.715 40.000 6.32 0.00 0.00 2.57
3538 14100 5.468746 CCAACCGGGACTAATGTGTATATTG 59.531 44.000 6.32 0.00 40.01 1.90
3539 14101 5.367352 TCCAACCGGGACTAATGTGTATATT 59.633 40.000 6.32 0.00 42.15 1.28
3540 14102 4.903049 TCCAACCGGGACTAATGTGTATAT 59.097 41.667 6.32 0.00 42.15 0.86
3541 14103 4.288398 TCCAACCGGGACTAATGTGTATA 58.712 43.478 6.32 0.00 42.15 1.47
3542 14104 3.109151 TCCAACCGGGACTAATGTGTAT 58.891 45.455 6.32 0.00 42.15 2.29
3543 14105 2.538222 TCCAACCGGGACTAATGTGTA 58.462 47.619 6.32 0.00 42.15 2.90
3544 14106 1.354101 TCCAACCGGGACTAATGTGT 58.646 50.000 6.32 0.00 42.15 3.72
3554 14116 1.019278 CAGTTCGTGATCCAACCGGG 61.019 60.000 6.32 0.00 38.37 5.73
3555 14117 1.019278 CCAGTTCGTGATCCAACCGG 61.019 60.000 0.00 0.00 0.00 5.28
3556 14118 1.019278 CCCAGTTCGTGATCCAACCG 61.019 60.000 0.00 0.00 0.00 4.44
3557 14119 0.323629 TCCCAGTTCGTGATCCAACC 59.676 55.000 0.00 0.00 0.00 3.77
3558 14120 1.002087 AGTCCCAGTTCGTGATCCAAC 59.998 52.381 0.00 0.00 0.00 3.77
3559 14121 1.348064 AGTCCCAGTTCGTGATCCAA 58.652 50.000 0.00 0.00 0.00 3.53
3560 14122 2.225382 TAGTCCCAGTTCGTGATCCA 57.775 50.000 0.00 0.00 0.00 3.41
3561 14123 3.118738 ACATTAGTCCCAGTTCGTGATCC 60.119 47.826 0.00 0.00 0.00 3.36
3562 14124 3.865745 CACATTAGTCCCAGTTCGTGATC 59.134 47.826 0.00 0.00 0.00 2.92
3563 14125 3.513912 TCACATTAGTCCCAGTTCGTGAT 59.486 43.478 0.00 0.00 0.00 3.06
3564 14126 2.894765 TCACATTAGTCCCAGTTCGTGA 59.105 45.455 0.00 0.00 0.00 4.35
3565 14127 3.254060 CTCACATTAGTCCCAGTTCGTG 58.746 50.000 0.00 0.00 0.00 4.35
3566 14128 3.594603 CTCACATTAGTCCCAGTTCGT 57.405 47.619 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.