Multiple sequence alignment - TraesCS6B01G380500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G380500 chr6B 100.000 2243 0 0 1 2243 655249787 655252029 0.000000e+00 4143.0
1 TraesCS6B01G380500 chr6B 77.264 519 89 19 34 537 701165241 701165745 6.100000e-71 278.0
2 TraesCS6B01G380500 chr6B 95.745 47 2 0 714 760 655250436 655250482 2.390000e-10 76.8
3 TraesCS6B01G380500 chr6B 95.745 47 2 0 650 696 655250500 655250546 2.390000e-10 76.8
4 TraesCS6B01G380500 chr6A 94.190 895 47 4 539 1429 579806686 579807579 0.000000e+00 1360.0
5 TraesCS6B01G380500 chr6A 78.520 419 62 17 137 539 541593375 541592969 1.330000e-62 250.0
6 TraesCS6B01G380500 chr6D 91.332 946 71 4 539 1482 433605625 433606561 0.000000e+00 1282.0
7 TraesCS6B01G380500 chr6D 79.317 527 77 25 31 539 395387567 395387055 7.670000e-90 340.0
8 TraesCS6B01G380500 chr6D 80.990 384 40 16 1747 2114 433620429 433620795 7.890000e-70 274.0
9 TraesCS6B01G380500 chr6D 89.744 117 11 1 1512 1628 433606554 433606669 4.990000e-32 148.0
10 TraesCS6B01G380500 chr6D 86.735 98 12 1 39 136 216769657 216769561 8.470000e-20 108.0
11 TraesCS6B01G380500 chr6D 83.529 85 11 3 34 117 361378263 361378181 2.390000e-10 76.8
12 TraesCS6B01G380500 chr6D 93.478 46 3 0 653 698 433605798 433605843 4.000000e-08 69.4
13 TraesCS6B01G380500 chr1B 94.805 539 21 2 1 539 129156092 129156623 0.000000e+00 833.0
14 TraesCS6B01G380500 chr7B 93.135 539 30 3 1 539 740680951 740680420 0.000000e+00 784.0
15 TraesCS6B01G380500 chr7B 96.154 234 8 1 1 234 674180566 674180798 4.520000e-102 381.0
16 TraesCS6B01G380500 chr3B 91.145 463 30 4 6 462 547708636 547709093 3.160000e-173 617.0
17 TraesCS6B01G380500 chr2B 93.207 368 20 1 78 445 71965464 71965826 9.120000e-149 536.0
18 TraesCS6B01G380500 chr4D 80.464 517 72 18 33 537 423433522 423433023 3.520000e-98 368.0
19 TraesCS6B01G380500 chrUn 77.885 416 61 17 139 539 172384092 172384491 1.730000e-56 230.0
20 TraesCS6B01G380500 chrUn 81.979 283 33 9 271 539 150143905 150143627 8.060000e-55 224.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G380500 chr6B 655249787 655252029 2242 False 1432.2 4143 97.163333 1 2243 3 chr6B.!!$F2 2242
1 TraesCS6B01G380500 chr6B 701165241 701165745 504 False 278.0 278 77.264000 34 537 1 chr6B.!!$F1 503
2 TraesCS6B01G380500 chr6A 579806686 579807579 893 False 1360.0 1360 94.190000 539 1429 1 chr6A.!!$F1 890
3 TraesCS6B01G380500 chr6D 433605625 433606669 1044 False 499.8 1282 91.518000 539 1628 3 chr6D.!!$F2 1089
4 TraesCS6B01G380500 chr6D 395387055 395387567 512 True 340.0 340 79.317000 31 539 1 chr6D.!!$R3 508
5 TraesCS6B01G380500 chr1B 129156092 129156623 531 False 833.0 833 94.805000 1 539 1 chr1B.!!$F1 538
6 TraesCS6B01G380500 chr7B 740680420 740680951 531 True 784.0 784 93.135000 1 539 1 chr7B.!!$R1 538

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
852 872 1.583556 TATGAAGGGGAGCAGCTTGA 58.416 50.0 0.0 0.0 0.0 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1863 1884 0.035343 GACCTGTGGGAAAGTAGGCC 60.035 60.0 0.0 0.0 33.57 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
118 121 3.631952 AATTACCCACCCCGCCACG 62.632 63.158 0.00 0.00 0.00 4.94
209 212 7.175990 CCCTAAAGTTGAACTAAATTAGCCACA 59.824 37.037 0.00 0.00 0.00 4.17
336 341 6.688637 TCTTTTCCTTCTCATGCACATATG 57.311 37.500 0.00 0.00 0.00 1.78
852 872 1.583556 TATGAAGGGGAGCAGCTTGA 58.416 50.000 0.00 0.00 0.00 3.02
878 898 3.825585 TCATGGTTGCTCTTTTGTGCATA 59.174 39.130 0.00 0.00 46.41 3.14
917 937 2.708861 TGGGCAGTGTAAGAAAGGAGAA 59.291 45.455 0.00 0.00 0.00 2.87
946 966 4.503910 CGTGTATTTTCTCCATCAGGTGA 58.496 43.478 0.00 0.00 35.70 4.02
950 970 7.254455 CGTGTATTTTCTCCATCAGGTGAATAC 60.254 40.741 0.00 0.00 44.39 1.89
962 982 8.522830 CCATCAGGTGAATACTTTTATGTTTGT 58.477 33.333 0.00 0.00 0.00 2.83
1020 1040 2.670148 GGATGGAAGGAGCCACGGT 61.670 63.158 0.00 0.00 41.56 4.83
1120 1140 2.036217 TGTGTCGAACGGGATTGTAAGT 59.964 45.455 0.00 0.00 0.00 2.24
1252 1272 1.066929 CCAATTGTTAGGCCCAACTGC 60.067 52.381 15.31 0.00 0.00 4.40
1287 1307 7.275888 TGCATGCTCTAAAGAAGAAGAAAAA 57.724 32.000 20.33 0.00 32.46 1.94
1315 1335 7.989416 AATTCAAATAACCTAGACCACGAAA 57.011 32.000 0.00 0.00 0.00 3.46
1343 1363 0.678366 TGCCACGCCCGTCAATATTT 60.678 50.000 0.00 0.00 0.00 1.40
1356 1376 5.767665 CCGTCAATATTTGATGTAATGGGGA 59.232 40.000 8.26 0.00 43.53 4.81
1409 1429 4.828939 TCCATCATGGATAAGGCAATGTTC 59.171 41.667 0.66 0.00 42.67 3.18
1442 1463 8.252417 TGTTAGATTGCATGAATTGTTTATGCT 58.748 29.630 16.80 2.18 45.53 3.79
1447 1468 5.291178 TGCATGAATTGTTTATGCTATGCC 58.709 37.500 16.80 0.00 45.53 4.40
1453 1474 7.609960 TGAATTGTTTATGCTATGCCAGAAAA 58.390 30.769 0.00 0.00 28.95 2.29
1478 1499 0.860457 AAGGAAGTCTGGGGCCTTTT 59.140 50.000 0.84 0.00 37.46 2.27
1479 1500 0.860457 AGGAAGTCTGGGGCCTTTTT 59.140 50.000 0.84 0.00 0.00 1.94
1505 1526 7.727578 TTTTGAAAAGAAAGGGGTTAAGTCT 57.272 32.000 0.00 0.00 0.00 3.24
1506 1527 6.709018 TTGAAAAGAAAGGGGTTAAGTCTG 57.291 37.500 0.00 0.00 0.00 3.51
1507 1528 5.137551 TGAAAAGAAAGGGGTTAAGTCTGG 58.862 41.667 0.00 0.00 0.00 3.86
1508 1529 3.808834 AAGAAAGGGGTTAAGTCTGGG 57.191 47.619 0.00 0.00 0.00 4.45
1509 1530 1.993301 AGAAAGGGGTTAAGTCTGGGG 59.007 52.381 0.00 0.00 0.00 4.96
1510 1531 1.709115 GAAAGGGGTTAAGTCTGGGGT 59.291 52.381 0.00 0.00 0.00 4.95
1511 1532 1.369403 AAGGGGTTAAGTCTGGGGTC 58.631 55.000 0.00 0.00 0.00 4.46
1512 1533 0.496841 AGGGGTTAAGTCTGGGGTCT 59.503 55.000 0.00 0.00 0.00 3.85
1513 1534 0.910338 GGGGTTAAGTCTGGGGTCTC 59.090 60.000 0.00 0.00 0.00 3.36
1514 1535 1.555058 GGGGTTAAGTCTGGGGTCTCT 60.555 57.143 0.00 0.00 0.00 3.10
1519 1540 4.445879 GGTTAAGTCTGGGGTCTCTGTTTT 60.446 45.833 0.00 0.00 0.00 2.43
1531 1552 3.680458 GTCTCTGTTTTGGCTGTAGCTAC 59.320 47.826 17.30 17.30 41.70 3.58
1534 1555 2.744202 CTGTTTTGGCTGTAGCTACTGG 59.256 50.000 26.29 18.71 41.70 4.00
1537 1558 3.502123 TTTGGCTGTAGCTACTGGTTT 57.498 42.857 26.29 0.00 41.70 3.27
1538 1559 2.762535 TGGCTGTAGCTACTGGTTTC 57.237 50.000 26.29 13.13 41.70 2.78
1540 1561 2.233922 TGGCTGTAGCTACTGGTTTCTC 59.766 50.000 26.29 12.25 41.70 2.87
1541 1562 2.498078 GGCTGTAGCTACTGGTTTCTCT 59.502 50.000 26.29 0.00 41.70 3.10
1552 1573 7.068962 AGCTACTGGTTTCTCTAATTCTAGACC 59.931 40.741 0.00 0.00 30.68 3.85
1556 1577 8.315482 ACTGGTTTCTCTAATTCTAGACCTTTC 58.685 37.037 0.00 0.00 30.68 2.62
1574 1595 7.609532 AGACCTTTCGAAATCAGAATCTCAAAT 59.390 33.333 11.70 0.00 0.00 2.32
1620 1641 8.641499 AGAATCGATTCTGAAGATTGAACTAC 57.359 34.615 34.07 6.64 44.91 2.73
1628 1649 4.326826 TGAAGATTGAACTACCAGGCAAG 58.673 43.478 0.00 0.00 0.00 4.01
1629 1650 3.356529 AGATTGAACTACCAGGCAAGG 57.643 47.619 0.00 0.00 0.00 3.61
1630 1651 2.025887 AGATTGAACTACCAGGCAAGGG 60.026 50.000 1.01 0.00 0.00 3.95
1631 1652 1.440618 TTGAACTACCAGGCAAGGGA 58.559 50.000 1.01 0.00 0.00 4.20
1632 1653 1.440618 TGAACTACCAGGCAAGGGAA 58.559 50.000 1.01 0.00 0.00 3.97
1633 1654 1.992557 TGAACTACCAGGCAAGGGAAT 59.007 47.619 1.01 0.00 0.00 3.01
1634 1655 2.378547 TGAACTACCAGGCAAGGGAATT 59.621 45.455 1.01 0.00 0.00 2.17
1635 1656 2.808906 ACTACCAGGCAAGGGAATTC 57.191 50.000 0.00 0.00 0.00 2.17
1636 1657 1.992557 ACTACCAGGCAAGGGAATTCA 59.007 47.619 7.93 0.00 0.00 2.57
1637 1658 2.025887 ACTACCAGGCAAGGGAATTCAG 60.026 50.000 7.93 0.00 0.00 3.02
1638 1659 1.075601 ACCAGGCAAGGGAATTCAGA 58.924 50.000 7.93 0.00 0.00 3.27
1639 1660 1.428912 ACCAGGCAAGGGAATTCAGAA 59.571 47.619 7.93 0.00 0.00 3.02
1640 1661 2.097825 CCAGGCAAGGGAATTCAGAAG 58.902 52.381 7.93 0.00 0.00 2.85
1641 1662 1.475682 CAGGCAAGGGAATTCAGAAGC 59.524 52.381 7.93 5.77 0.00 3.86
1642 1663 1.357079 AGGCAAGGGAATTCAGAAGCT 59.643 47.619 7.93 0.00 0.00 3.74
1643 1664 1.475682 GGCAAGGGAATTCAGAAGCTG 59.524 52.381 7.93 0.00 0.00 4.24
1644 1665 1.135170 GCAAGGGAATTCAGAAGCTGC 60.135 52.381 7.93 3.47 0.00 5.25
1645 1666 1.131883 CAAGGGAATTCAGAAGCTGCG 59.868 52.381 7.93 0.00 0.00 5.18
1646 1667 0.615331 AGGGAATTCAGAAGCTGCGA 59.385 50.000 7.93 0.00 0.00 5.10
1647 1668 1.012841 GGGAATTCAGAAGCTGCGAG 58.987 55.000 7.93 0.00 0.00 5.03
1648 1669 1.677217 GGGAATTCAGAAGCTGCGAGT 60.677 52.381 7.93 0.00 0.00 4.18
1649 1670 2.079925 GGAATTCAGAAGCTGCGAGTT 58.920 47.619 7.93 0.00 0.00 3.01
1650 1671 2.159599 GGAATTCAGAAGCTGCGAGTTG 60.160 50.000 7.93 0.00 0.00 3.16
1651 1672 1.446907 ATTCAGAAGCTGCGAGTTGG 58.553 50.000 0.00 0.00 0.00 3.77
1652 1673 0.603707 TTCAGAAGCTGCGAGTTGGG 60.604 55.000 0.00 0.00 0.00 4.12
1653 1674 2.359230 AGAAGCTGCGAGTTGGGC 60.359 61.111 0.00 0.00 0.00 5.36
1654 1675 3.793144 GAAGCTGCGAGTTGGGCG 61.793 66.667 0.00 0.00 0.00 6.13
1655 1676 4.314440 AAGCTGCGAGTTGGGCGA 62.314 61.111 0.00 0.00 0.00 5.54
1656 1677 3.612247 AAGCTGCGAGTTGGGCGAT 62.612 57.895 0.00 0.00 0.00 4.58
1657 1678 3.127533 GCTGCGAGTTGGGCGATT 61.128 61.111 0.00 0.00 0.00 3.34
1658 1679 3.093278 CTGCGAGTTGGGCGATTC 58.907 61.111 0.00 0.00 0.00 2.52
1659 1680 1.741401 CTGCGAGTTGGGCGATTCA 60.741 57.895 0.00 0.00 0.00 2.57
1660 1681 1.298157 CTGCGAGTTGGGCGATTCAA 61.298 55.000 0.00 0.00 0.00 2.69
1661 1682 1.134694 GCGAGTTGGGCGATTCAAC 59.865 57.895 7.55 7.55 43.31 3.18
1662 1683 1.419922 CGAGTTGGGCGATTCAACG 59.580 57.895 9.24 0.00 46.36 4.10
1663 1684 1.794222 GAGTTGGGCGATTCAACGG 59.206 57.895 9.24 0.00 46.36 4.44
1669 1690 2.813908 GCGATTCAACGGCCGACT 60.814 61.111 35.90 16.22 0.00 4.18
1670 1691 2.799540 GCGATTCAACGGCCGACTC 61.800 63.158 35.90 18.13 0.00 3.36
1671 1692 1.153823 CGATTCAACGGCCGACTCT 60.154 57.895 35.90 12.17 0.00 3.24
1672 1693 1.413767 CGATTCAACGGCCGACTCTG 61.414 60.000 35.90 21.87 0.00 3.35
1673 1694 1.696832 GATTCAACGGCCGACTCTGC 61.697 60.000 35.90 13.09 0.00 4.26
1674 1695 2.449031 ATTCAACGGCCGACTCTGCA 62.449 55.000 35.90 13.81 0.00 4.41
1675 1696 3.114616 CAACGGCCGACTCTGCAG 61.115 66.667 35.90 7.63 0.00 4.41
1676 1697 3.616721 AACGGCCGACTCTGCAGT 61.617 61.111 35.90 1.64 38.81 4.40
1677 1698 3.165160 AACGGCCGACTCTGCAGTT 62.165 57.895 35.90 9.43 41.28 3.16
1678 1699 2.357517 CGGCCGACTCTGCAGTTT 60.358 61.111 24.07 0.97 30.63 2.66
1679 1700 2.671177 CGGCCGACTCTGCAGTTTG 61.671 63.158 24.07 8.01 30.63 2.93
1680 1701 1.301716 GGCCGACTCTGCAGTTTGA 60.302 57.895 14.67 0.00 30.63 2.69
1681 1702 1.294659 GGCCGACTCTGCAGTTTGAG 61.295 60.000 14.67 6.37 36.47 3.02
1682 1703 0.601311 GCCGACTCTGCAGTTTGAGT 60.601 55.000 14.67 9.97 45.06 3.41
1687 1708 2.843701 ACTCTGCAGTTTGAGTCCTTG 58.156 47.619 14.67 0.00 39.04 3.61
1688 1709 1.534595 CTCTGCAGTTTGAGTCCTTGC 59.465 52.381 14.67 0.00 35.42 4.01
1689 1710 0.595095 CTGCAGTTTGAGTCCTTGCC 59.405 55.000 5.25 0.00 33.98 4.52
1690 1711 0.823356 TGCAGTTTGAGTCCTTGCCC 60.823 55.000 0.00 0.00 33.98 5.36
1691 1712 0.538287 GCAGTTTGAGTCCTTGCCCT 60.538 55.000 0.00 0.00 0.00 5.19
1692 1713 1.242076 CAGTTTGAGTCCTTGCCCTG 58.758 55.000 0.00 0.00 0.00 4.45
1693 1714 0.111253 AGTTTGAGTCCTTGCCCTGG 59.889 55.000 0.00 0.00 0.00 4.45
1694 1715 0.178990 GTTTGAGTCCTTGCCCTGGT 60.179 55.000 0.00 0.00 0.00 4.00
1695 1716 0.555769 TTTGAGTCCTTGCCCTGGTT 59.444 50.000 0.00 0.00 0.00 3.67
1696 1717 0.555769 TTGAGTCCTTGCCCTGGTTT 59.444 50.000 0.00 0.00 0.00 3.27
1697 1718 0.178992 TGAGTCCTTGCCCTGGTTTG 60.179 55.000 0.00 0.00 0.00 2.93
1698 1719 1.527433 GAGTCCTTGCCCTGGTTTGC 61.527 60.000 0.00 0.00 0.00 3.68
1699 1720 1.832167 GTCCTTGCCCTGGTTTGCA 60.832 57.895 0.00 0.00 35.27 4.08
1700 1721 1.531365 TCCTTGCCCTGGTTTGCAG 60.531 57.895 0.00 0.00 38.95 4.41
1701 1722 1.833934 CCTTGCCCTGGTTTGCAGT 60.834 57.895 0.00 0.00 38.95 4.40
1702 1723 1.662044 CTTGCCCTGGTTTGCAGTC 59.338 57.895 0.00 0.00 38.95 3.51
1703 1724 1.076412 TTGCCCTGGTTTGCAGTCA 60.076 52.632 0.00 0.00 38.95 3.41
1704 1725 0.685785 TTGCCCTGGTTTGCAGTCAA 60.686 50.000 0.00 0.00 38.95 3.18
1705 1726 0.685785 TGCCCTGGTTTGCAGTCAAA 60.686 50.000 0.00 0.00 39.67 2.69
1706 1727 0.463620 GCCCTGGTTTGCAGTCAAAA 59.536 50.000 0.00 0.00 43.12 2.44
1707 1728 1.070601 GCCCTGGTTTGCAGTCAAAAT 59.929 47.619 0.00 0.00 43.12 1.82
1708 1729 2.485302 GCCCTGGTTTGCAGTCAAAATT 60.485 45.455 0.00 0.00 43.12 1.82
1709 1730 3.244044 GCCCTGGTTTGCAGTCAAAATTA 60.244 43.478 0.00 0.00 43.12 1.40
1710 1731 4.306600 CCCTGGTTTGCAGTCAAAATTAC 58.693 43.478 0.00 0.00 43.12 1.89
1711 1732 4.202202 CCCTGGTTTGCAGTCAAAATTACA 60.202 41.667 0.00 0.00 43.12 2.41
1712 1733 5.355596 CCTGGTTTGCAGTCAAAATTACAA 58.644 37.500 0.00 0.00 43.12 2.41
1713 1734 5.814705 CCTGGTTTGCAGTCAAAATTACAAA 59.185 36.000 0.00 0.00 43.12 2.83
1714 1735 6.314896 CCTGGTTTGCAGTCAAAATTACAAAA 59.685 34.615 0.00 0.00 43.12 2.44
1715 1736 7.148340 CCTGGTTTGCAGTCAAAATTACAAAAA 60.148 33.333 0.00 0.00 43.12 1.94
1739 1760 8.567285 AAAAATCATTCAAGTAGTAGTCCCAG 57.433 34.615 0.00 0.00 0.00 4.45
1740 1761 4.737855 TCATTCAAGTAGTAGTCCCAGC 57.262 45.455 0.00 0.00 0.00 4.85
1741 1762 3.451178 TCATTCAAGTAGTAGTCCCAGCC 59.549 47.826 0.00 0.00 0.00 4.85
1742 1763 2.615986 TCAAGTAGTAGTCCCAGCCA 57.384 50.000 0.00 0.00 0.00 4.75
1743 1764 3.116096 TCAAGTAGTAGTCCCAGCCAT 57.884 47.619 0.00 0.00 0.00 4.40
1744 1765 3.450904 TCAAGTAGTAGTCCCAGCCATT 58.549 45.455 0.00 0.00 0.00 3.16
1745 1766 3.197766 TCAAGTAGTAGTCCCAGCCATTG 59.802 47.826 0.00 0.00 0.00 2.82
1746 1767 2.834113 AGTAGTAGTCCCAGCCATTGT 58.166 47.619 0.00 0.00 0.00 2.71
1747 1768 2.766828 AGTAGTAGTCCCAGCCATTGTC 59.233 50.000 0.00 0.00 0.00 3.18
1748 1769 1.958288 AGTAGTCCCAGCCATTGTCT 58.042 50.000 0.00 0.00 0.00 3.41
1749 1770 1.834263 AGTAGTCCCAGCCATTGTCTC 59.166 52.381 0.00 0.00 0.00 3.36
1750 1771 1.834263 GTAGTCCCAGCCATTGTCTCT 59.166 52.381 0.00 0.00 0.00 3.10
1751 1772 0.908198 AGTCCCAGCCATTGTCTCTC 59.092 55.000 0.00 0.00 0.00 3.20
1752 1773 0.908198 GTCCCAGCCATTGTCTCTCT 59.092 55.000 0.00 0.00 0.00 3.10
1753 1774 1.134551 GTCCCAGCCATTGTCTCTCTC 60.135 57.143 0.00 0.00 0.00 3.20
1754 1775 1.202330 CCCAGCCATTGTCTCTCTCT 58.798 55.000 0.00 0.00 0.00 3.10
1755 1776 1.138661 CCCAGCCATTGTCTCTCTCTC 59.861 57.143 0.00 0.00 0.00 3.20
1756 1777 1.202394 CCAGCCATTGTCTCTCTCTCG 60.202 57.143 0.00 0.00 0.00 4.04
1757 1778 0.459489 AGCCATTGTCTCTCTCTCGC 59.541 55.000 0.00 0.00 0.00 5.03
1758 1779 0.459489 GCCATTGTCTCTCTCTCGCT 59.541 55.000 0.00 0.00 0.00 4.93
1759 1780 1.678627 GCCATTGTCTCTCTCTCGCTA 59.321 52.381 0.00 0.00 0.00 4.26
1760 1781 2.295909 GCCATTGTCTCTCTCTCGCTAT 59.704 50.000 0.00 0.00 0.00 2.97
1761 1782 3.243704 GCCATTGTCTCTCTCTCGCTATT 60.244 47.826 0.00 0.00 0.00 1.73
1762 1783 4.545610 CCATTGTCTCTCTCTCGCTATTC 58.454 47.826 0.00 0.00 0.00 1.75
1763 1784 4.545610 CATTGTCTCTCTCTCGCTATTCC 58.454 47.826 0.00 0.00 0.00 3.01
1764 1785 3.569194 TGTCTCTCTCTCGCTATTCCT 57.431 47.619 0.00 0.00 0.00 3.36
1765 1786 3.472652 TGTCTCTCTCTCGCTATTCCTC 58.527 50.000 0.00 0.00 0.00 3.71
1766 1787 2.812011 GTCTCTCTCTCGCTATTCCTCC 59.188 54.545 0.00 0.00 0.00 4.30
1767 1788 2.439880 TCTCTCTCTCGCTATTCCTCCA 59.560 50.000 0.00 0.00 0.00 3.86
1768 1789 3.117851 TCTCTCTCTCGCTATTCCTCCAA 60.118 47.826 0.00 0.00 0.00 3.53
1769 1790 2.952978 TCTCTCTCGCTATTCCTCCAAC 59.047 50.000 0.00 0.00 0.00 3.77
1770 1791 2.690497 CTCTCTCGCTATTCCTCCAACA 59.310 50.000 0.00 0.00 0.00 3.33
1771 1792 2.690497 TCTCTCGCTATTCCTCCAACAG 59.310 50.000 0.00 0.00 0.00 3.16
1772 1793 1.137086 TCTCGCTATTCCTCCAACAGC 59.863 52.381 0.00 0.00 0.00 4.40
1773 1794 0.178068 TCGCTATTCCTCCAACAGCC 59.822 55.000 0.00 0.00 0.00 4.85
1774 1795 1.154205 CGCTATTCCTCCAACAGCCG 61.154 60.000 0.00 0.00 0.00 5.52
1775 1796 1.440145 GCTATTCCTCCAACAGCCGC 61.440 60.000 0.00 0.00 0.00 6.53
1776 1797 0.815615 CTATTCCTCCAACAGCCGCC 60.816 60.000 0.00 0.00 0.00 6.13
1777 1798 2.587322 TATTCCTCCAACAGCCGCCG 62.587 60.000 0.00 0.00 0.00 6.46
1780 1801 3.726517 CTCCAACAGCCGCCGTTG 61.727 66.667 11.83 11.83 42.73 4.10
1783 1804 4.389576 CAACAGCCGCCGTTGCTC 62.390 66.667 6.54 0.00 37.53 4.26
1792 1813 4.351938 CCGTTGCTCGTCCCGTCA 62.352 66.667 1.89 0.00 37.94 4.35
1793 1814 2.126071 CGTTGCTCGTCCCGTCAT 60.126 61.111 0.00 0.00 34.52 3.06
1794 1815 2.158959 CGTTGCTCGTCCCGTCATC 61.159 63.158 0.00 0.00 34.52 2.92
1795 1816 1.810030 GTTGCTCGTCCCGTCATCC 60.810 63.158 0.00 0.00 0.00 3.51
1796 1817 1.982395 TTGCTCGTCCCGTCATCCT 60.982 57.895 0.00 0.00 0.00 3.24
1797 1818 1.945354 TTGCTCGTCCCGTCATCCTC 61.945 60.000 0.00 0.00 0.00 3.71
1798 1819 3.121019 CTCGTCCCGTCATCCTCC 58.879 66.667 0.00 0.00 0.00 4.30
1799 1820 1.753078 CTCGTCCCGTCATCCTCCA 60.753 63.158 0.00 0.00 0.00 3.86
1800 1821 1.729470 CTCGTCCCGTCATCCTCCAG 61.729 65.000 0.00 0.00 0.00 3.86
1801 1822 2.052690 CGTCCCGTCATCCTCCAGT 61.053 63.158 0.00 0.00 0.00 4.00
1802 1823 1.605058 CGTCCCGTCATCCTCCAGTT 61.605 60.000 0.00 0.00 0.00 3.16
1803 1824 1.481871 GTCCCGTCATCCTCCAGTTA 58.518 55.000 0.00 0.00 0.00 2.24
1804 1825 1.136500 GTCCCGTCATCCTCCAGTTAC 59.864 57.143 0.00 0.00 0.00 2.50
1805 1826 1.006758 TCCCGTCATCCTCCAGTTACT 59.993 52.381 0.00 0.00 0.00 2.24
1806 1827 1.409427 CCCGTCATCCTCCAGTTACTC 59.591 57.143 0.00 0.00 0.00 2.59
1807 1828 1.409427 CCGTCATCCTCCAGTTACTCC 59.591 57.143 0.00 0.00 0.00 3.85
1808 1829 2.379972 CGTCATCCTCCAGTTACTCCT 58.620 52.381 0.00 0.00 0.00 3.69
1809 1830 2.359531 CGTCATCCTCCAGTTACTCCTC 59.640 54.545 0.00 0.00 0.00 3.71
1810 1831 3.637769 GTCATCCTCCAGTTACTCCTCT 58.362 50.000 0.00 0.00 0.00 3.69
1811 1832 3.634910 GTCATCCTCCAGTTACTCCTCTC 59.365 52.174 0.00 0.00 0.00 3.20
1812 1833 2.830651 TCCTCCAGTTACTCCTCTCC 57.169 55.000 0.00 0.00 0.00 3.71
1813 1834 1.288335 TCCTCCAGTTACTCCTCTCCC 59.712 57.143 0.00 0.00 0.00 4.30
1814 1835 1.689892 CCTCCAGTTACTCCTCTCCCC 60.690 61.905 0.00 0.00 0.00 4.81
1815 1836 1.289530 CTCCAGTTACTCCTCTCCCCT 59.710 57.143 0.00 0.00 0.00 4.79
1816 1837 1.288335 TCCAGTTACTCCTCTCCCCTC 59.712 57.143 0.00 0.00 0.00 4.30
1817 1838 1.289530 CCAGTTACTCCTCTCCCCTCT 59.710 57.143 0.00 0.00 0.00 3.69
1818 1839 2.661718 CAGTTACTCCTCTCCCCTCTC 58.338 57.143 0.00 0.00 0.00 3.20
1819 1840 1.213430 AGTTACTCCTCTCCCCTCTCG 59.787 57.143 0.00 0.00 0.00 4.04
1820 1841 1.064537 GTTACTCCTCTCCCCTCTCGT 60.065 57.143 0.00 0.00 0.00 4.18
1821 1842 0.838608 TACTCCTCTCCCCTCTCGTC 59.161 60.000 0.00 0.00 0.00 4.20
1822 1843 0.917333 ACTCCTCTCCCCTCTCGTCT 60.917 60.000 0.00 0.00 0.00 4.18
1823 1844 0.179029 CTCCTCTCCCCTCTCGTCTC 60.179 65.000 0.00 0.00 0.00 3.36
1824 1845 0.622154 TCCTCTCCCCTCTCGTCTCT 60.622 60.000 0.00 0.00 0.00 3.10
1825 1846 0.179029 CCTCTCCCCTCTCGTCTCTC 60.179 65.000 0.00 0.00 0.00 3.20
1826 1847 0.179029 CTCTCCCCTCTCGTCTCTCC 60.179 65.000 0.00 0.00 0.00 3.71
1827 1848 1.152839 CTCCCCTCTCGTCTCTCCC 60.153 68.421 0.00 0.00 0.00 4.30
1828 1849 2.517402 CCCCTCTCGTCTCTCCCG 60.517 72.222 0.00 0.00 0.00 5.14
1829 1850 2.272797 CCCTCTCGTCTCTCCCGT 59.727 66.667 0.00 0.00 0.00 5.28
1830 1851 1.820481 CCCTCTCGTCTCTCCCGTC 60.820 68.421 0.00 0.00 0.00 4.79
1831 1852 2.174969 CCTCTCGTCTCTCCCGTCG 61.175 68.421 0.00 0.00 0.00 5.12
1832 1853 2.125229 TCTCGTCTCTCCCGTCGG 60.125 66.667 3.60 3.60 0.00 4.79
1833 1854 2.436292 CTCGTCTCTCCCGTCGGT 60.436 66.667 11.06 0.00 0.00 4.69
1834 1855 2.745100 TCGTCTCTCCCGTCGGTG 60.745 66.667 11.06 2.75 0.00 4.94
1835 1856 3.054503 CGTCTCTCCCGTCGGTGT 61.055 66.667 11.06 0.00 0.00 4.16
1836 1857 1.742880 CGTCTCTCCCGTCGGTGTA 60.743 63.158 11.06 0.00 0.00 2.90
1837 1858 1.799383 GTCTCTCCCGTCGGTGTAC 59.201 63.158 11.06 2.97 0.00 2.90
1838 1859 1.742880 TCTCTCCCGTCGGTGTACG 60.743 63.158 11.06 0.00 46.11 3.67
1851 1872 1.964448 TGTACGAGAGGTGCACTGG 59.036 57.895 17.98 0.48 36.25 4.00
1852 1873 1.446272 GTACGAGAGGTGCACTGGC 60.446 63.158 17.98 6.42 41.68 4.85
1853 1874 2.646175 TACGAGAGGTGCACTGGCC 61.646 63.158 17.98 0.00 40.13 5.36
1854 1875 4.007644 CGAGAGGTGCACTGGCCA 62.008 66.667 17.98 4.71 40.13 5.36
1855 1876 2.673523 GAGAGGTGCACTGGCCAT 59.326 61.111 17.98 0.00 40.13 4.40
1856 1877 1.748122 GAGAGGTGCACTGGCCATG 60.748 63.158 17.98 8.43 40.13 3.66
1857 1878 2.753043 GAGGTGCACTGGCCATGG 60.753 66.667 17.98 7.63 40.13 3.66
1858 1879 3.259314 AGGTGCACTGGCCATGGA 61.259 61.111 18.40 5.50 40.13 3.41
1859 1880 3.064324 GGTGCACTGGCCATGGAC 61.064 66.667 18.40 22.64 40.13 4.02
1860 1881 2.282391 GTGCACTGGCCATGGACA 60.282 61.111 22.03 22.03 38.22 4.02
1861 1882 1.679977 GTGCACTGGCCATGGACAT 60.680 57.895 23.87 8.87 38.22 3.06
1862 1883 1.378911 TGCACTGGCCATGGACATC 60.379 57.895 23.87 14.04 40.13 3.06
1863 1884 2.475466 GCACTGGCCATGGACATCG 61.475 63.158 23.87 16.54 29.87 3.84
1864 1885 1.820906 CACTGGCCATGGACATCGG 60.821 63.158 23.87 12.82 29.87 4.18
1865 1886 2.903855 CTGGCCATGGACATCGGC 60.904 66.667 23.87 0.00 45.47 5.54
1868 1889 2.828868 GCCATGGACATCGGCCTA 59.171 61.111 18.40 0.00 40.07 3.93
1869 1890 1.598130 GCCATGGACATCGGCCTAC 60.598 63.158 18.40 0.00 40.07 3.18
1870 1891 2.044806 GCCATGGACATCGGCCTACT 62.045 60.000 18.40 0.00 40.07 2.57
1871 1892 0.469917 CCATGGACATCGGCCTACTT 59.530 55.000 5.56 0.00 0.00 2.24
1872 1893 1.134098 CCATGGACATCGGCCTACTTT 60.134 52.381 5.56 0.00 0.00 2.66
1873 1894 2.213499 CATGGACATCGGCCTACTTTC 58.787 52.381 0.00 0.00 0.00 2.62
1874 1895 0.539986 TGGACATCGGCCTACTTTCC 59.460 55.000 0.00 0.38 0.00 3.13
1875 1896 0.179054 GGACATCGGCCTACTTTCCC 60.179 60.000 0.00 0.00 0.00 3.97
1876 1897 0.539986 GACATCGGCCTACTTTCCCA 59.460 55.000 0.00 0.00 0.00 4.37
1877 1898 0.252197 ACATCGGCCTACTTTCCCAC 59.748 55.000 0.00 0.00 0.00 4.61
1878 1899 0.251916 CATCGGCCTACTTTCCCACA 59.748 55.000 0.00 0.00 0.00 4.17
1879 1900 0.541863 ATCGGCCTACTTTCCCACAG 59.458 55.000 0.00 0.00 0.00 3.66
1880 1901 1.078426 CGGCCTACTTTCCCACAGG 60.078 63.158 0.00 0.00 0.00 4.00
1881 1902 1.838073 CGGCCTACTTTCCCACAGGT 61.838 60.000 0.00 0.00 0.00 4.00
1882 1903 0.035343 GGCCTACTTTCCCACAGGTC 60.035 60.000 0.00 0.00 0.00 3.85
1883 1904 0.035343 GCCTACTTTCCCACAGGTCC 60.035 60.000 0.00 0.00 0.00 4.46
1884 1905 1.657804 CCTACTTTCCCACAGGTCCT 58.342 55.000 0.00 0.00 0.00 3.85
1885 1906 1.555533 CCTACTTTCCCACAGGTCCTC 59.444 57.143 0.00 0.00 0.00 3.71
1886 1907 1.555533 CTACTTTCCCACAGGTCCTCC 59.444 57.143 0.00 0.00 0.00 4.30
1887 1908 0.104409 ACTTTCCCACAGGTCCTCCT 60.104 55.000 0.00 0.00 46.37 3.69
1888 1909 0.615850 CTTTCCCACAGGTCCTCCTC 59.384 60.000 0.00 0.00 43.07 3.71
1889 1910 0.840722 TTTCCCACAGGTCCTCCTCC 60.841 60.000 0.00 0.00 43.07 4.30
1890 1911 2.689034 CCCACAGGTCCTCCTCCC 60.689 72.222 0.00 0.00 43.07 4.30
1891 1912 3.077556 CCACAGGTCCTCCTCCCG 61.078 72.222 0.00 0.00 43.07 5.14
1892 1913 2.283966 CACAGGTCCTCCTCCCGT 60.284 66.667 0.00 0.00 43.07 5.28
1893 1914 2.283966 ACAGGTCCTCCTCCCGTG 60.284 66.667 0.00 0.00 43.07 4.94
1894 1915 3.077556 CAGGTCCTCCTCCCGTGG 61.078 72.222 0.00 0.00 43.07 4.94
1895 1916 3.602030 AGGTCCTCCTCCCGTGGT 61.602 66.667 0.00 0.00 40.58 4.16
1896 1917 3.391382 GGTCCTCCTCCCGTGGTG 61.391 72.222 0.00 0.00 0.00 4.17
1897 1918 4.083862 GTCCTCCTCCCGTGGTGC 62.084 72.222 0.00 0.00 0.00 5.01
1902 1923 4.802051 CCTCCCGTGGTGCCCATG 62.802 72.222 6.48 6.48 40.02 3.66
1903 1924 3.716195 CTCCCGTGGTGCCCATGA 61.716 66.667 13.30 3.90 42.73 3.07
1904 1925 3.687321 CTCCCGTGGTGCCCATGAG 62.687 68.421 13.30 8.64 42.73 2.90
1906 1927 4.415150 CCGTGGTGCCCATGAGCT 62.415 66.667 13.30 0.00 42.73 4.09
1907 1928 2.821366 CGTGGTGCCCATGAGCTC 60.821 66.667 6.82 6.82 42.73 4.09
1908 1929 2.439156 GTGGTGCCCATGAGCTCC 60.439 66.667 12.92 12.92 44.83 4.70
1909 1930 3.731728 TGGTGCCCATGAGCTCCC 61.732 66.667 16.54 9.29 44.14 4.30
1910 1931 4.864334 GGTGCCCATGAGCTCCCG 62.864 72.222 12.15 1.44 39.91 5.14
1911 1932 4.101448 GTGCCCATGAGCTCCCGT 62.101 66.667 12.15 0.00 0.00 5.28
1912 1933 3.785859 TGCCCATGAGCTCCCGTC 61.786 66.667 12.15 0.00 0.00 4.79
1913 1934 4.899239 GCCCATGAGCTCCCGTCG 62.899 72.222 12.15 0.00 0.00 5.12
1914 1935 4.227134 CCCATGAGCTCCCGTCGG 62.227 72.222 12.15 3.60 0.00 4.79
1915 1936 3.147595 CCATGAGCTCCCGTCGGA 61.148 66.667 14.39 0.00 36.45 4.55
1923 1944 4.445832 TCCCGTCGGAGGATCAAA 57.554 55.556 14.39 0.00 36.25 2.69
1924 1945 2.910579 TCCCGTCGGAGGATCAAAT 58.089 52.632 14.39 0.00 36.25 2.32
1925 1946 0.750850 TCCCGTCGGAGGATCAAATC 59.249 55.000 14.39 0.00 36.25 2.17
1926 1947 0.464036 CCCGTCGGAGGATCAAATCA 59.536 55.000 14.39 0.00 36.25 2.57
1927 1948 1.539065 CCCGTCGGAGGATCAAATCAG 60.539 57.143 14.39 0.00 36.25 2.90
1928 1949 1.539065 CCGTCGGAGGATCAAATCAGG 60.539 57.143 4.91 0.00 36.25 3.86
1929 1950 1.539065 CGTCGGAGGATCAAATCAGGG 60.539 57.143 0.00 0.00 36.25 4.45
1930 1951 0.469917 TCGGAGGATCAAATCAGGGC 59.530 55.000 0.00 0.00 36.25 5.19
1931 1952 0.181114 CGGAGGATCAAATCAGGGCA 59.819 55.000 0.00 0.00 36.25 5.36
1932 1953 1.408683 CGGAGGATCAAATCAGGGCAA 60.409 52.381 0.00 0.00 36.25 4.52
1933 1954 2.027385 GGAGGATCAAATCAGGGCAAC 58.973 52.381 0.00 0.00 36.25 4.17
1960 1981 2.737376 GGCGTGGTGAAGGACGAC 60.737 66.667 0.00 0.00 37.81 4.34
1961 1982 2.737376 GCGTGGTGAAGGACGACC 60.737 66.667 0.00 0.00 37.81 4.79
1962 1983 2.732016 CGTGGTGAAGGACGACCA 59.268 61.111 6.71 0.00 40.04 4.02
1963 1984 1.068417 CGTGGTGAAGGACGACCAA 59.932 57.895 6.71 0.00 43.91 3.67
1964 1985 0.944311 CGTGGTGAAGGACGACCAAG 60.944 60.000 6.71 0.00 43.91 3.61
1965 1986 1.070786 TGGTGAAGGACGACCAAGC 59.929 57.895 6.71 1.86 39.36 4.01
1966 1987 2.027625 GGTGAAGGACGACCAAGCG 61.028 63.158 6.71 0.00 38.94 4.68
1967 1988 2.027625 GTGAAGGACGACCAAGCGG 61.028 63.158 6.71 0.00 38.94 5.52
1968 1989 2.204461 TGAAGGACGACCAAGCGGA 61.204 57.895 6.71 0.00 38.94 5.54
1969 1990 1.218316 GAAGGACGACCAAGCGGAT 59.782 57.895 6.71 0.00 38.94 4.18
1970 1991 1.079127 AAGGACGACCAAGCGGATG 60.079 57.895 6.71 0.00 38.94 3.51
1971 1992 1.541310 AAGGACGACCAAGCGGATGA 61.541 55.000 6.71 0.00 38.94 2.92
1972 1993 1.079405 GGACGACCAAGCGGATGAA 60.079 57.895 0.00 0.00 35.59 2.57
1973 1994 0.672401 GGACGACCAAGCGGATGAAA 60.672 55.000 0.00 0.00 35.59 2.69
1974 1995 0.721718 GACGACCAAGCGGATGAAAG 59.278 55.000 0.00 0.00 35.59 2.62
1975 1996 0.673644 ACGACCAAGCGGATGAAAGG 60.674 55.000 0.00 0.00 35.59 3.11
1976 1997 0.673644 CGACCAAGCGGATGAAAGGT 60.674 55.000 0.00 0.00 35.59 3.50
1977 1998 1.087501 GACCAAGCGGATGAAAGGTC 58.912 55.000 0.00 0.00 38.77 3.85
1978 1999 0.673644 ACCAAGCGGATGAAAGGTCG 60.674 55.000 0.00 0.00 35.59 4.79
1979 2000 1.369091 CCAAGCGGATGAAAGGTCGG 61.369 60.000 0.00 0.00 0.00 4.79
1980 2001 1.078426 AAGCGGATGAAAGGTCGGG 60.078 57.895 0.00 0.00 0.00 5.14
1981 2002 1.550130 AAGCGGATGAAAGGTCGGGA 61.550 55.000 0.00 0.00 0.00 5.14
1982 2003 1.521681 GCGGATGAAAGGTCGGGAG 60.522 63.158 0.00 0.00 0.00 4.30
1983 2004 1.521681 CGGATGAAAGGTCGGGAGC 60.522 63.158 0.00 0.00 0.00 4.70
1984 2005 1.521681 GGATGAAAGGTCGGGAGCG 60.522 63.158 0.00 0.00 0.00 5.03
1985 2006 1.521681 GATGAAAGGTCGGGAGCGG 60.522 63.158 0.00 0.00 0.00 5.52
1986 2007 3.682292 ATGAAAGGTCGGGAGCGGC 62.682 63.158 0.00 0.00 0.00 6.53
2002 2023 3.198489 GCCAAGCTAGACGGCAGC 61.198 66.667 11.43 4.72 45.52 5.25
2003 2024 2.887568 CCAAGCTAGACGGCAGCG 60.888 66.667 6.99 0.00 43.97 5.18
2004 2025 2.181777 CAAGCTAGACGGCAGCGA 59.818 61.111 6.99 0.00 43.97 4.93
2005 2026 1.875813 CAAGCTAGACGGCAGCGAG 60.876 63.158 6.99 1.29 43.97 5.03
2006 2027 3.069980 AAGCTAGACGGCAGCGAGG 62.070 63.158 6.99 0.00 43.97 4.63
2066 2087 4.008933 CGGATCGGATCAGGGGGC 62.009 72.222 18.99 0.53 0.00 5.80
2067 2088 4.008933 GGATCGGATCAGGGGGCG 62.009 72.222 18.99 0.00 0.00 6.13
2068 2089 4.008933 GATCGGATCAGGGGGCGG 62.009 72.222 13.02 0.00 0.00 6.13
2098 2119 4.059459 GTTCCGCGTGCACGACTG 62.059 66.667 41.19 27.58 43.02 3.51
2107 2128 3.163655 GCACGACTGCAGAAGAGC 58.836 61.111 23.35 18.65 43.62 4.09
2108 2129 2.386660 GCACGACTGCAGAAGAGCC 61.387 63.158 23.35 5.26 43.62 4.70
2109 2130 2.091112 CACGACTGCAGAAGAGCCG 61.091 63.158 23.35 14.77 0.00 5.52
2110 2131 3.184683 CGACTGCAGAAGAGCCGC 61.185 66.667 23.35 0.00 0.00 6.53
2111 2132 2.817396 GACTGCAGAAGAGCCGCC 60.817 66.667 23.35 0.00 0.00 6.13
2112 2133 4.749310 ACTGCAGAAGAGCCGCCG 62.749 66.667 23.35 0.00 0.00 6.46
2113 2134 4.441695 CTGCAGAAGAGCCGCCGA 62.442 66.667 8.42 0.00 0.00 5.54
2114 2135 3.939837 CTGCAGAAGAGCCGCCGAA 62.940 63.158 8.42 0.00 0.00 4.30
2115 2136 3.191539 GCAGAAGAGCCGCCGAAG 61.192 66.667 0.00 0.00 0.00 3.79
2116 2137 2.573869 CAGAAGAGCCGCCGAAGA 59.426 61.111 0.00 0.00 0.00 2.87
2117 2138 1.079819 CAGAAGAGCCGCCGAAGAA 60.080 57.895 0.00 0.00 0.00 2.52
2118 2139 1.080995 CAGAAGAGCCGCCGAAGAAG 61.081 60.000 0.00 0.00 0.00 2.85
2119 2140 1.215647 GAAGAGCCGCCGAAGAAGA 59.784 57.895 0.00 0.00 0.00 2.87
2120 2141 0.804156 GAAGAGCCGCCGAAGAAGAG 60.804 60.000 0.00 0.00 0.00 2.85
2121 2142 2.844072 AAGAGCCGCCGAAGAAGAGC 62.844 60.000 0.00 0.00 0.00 4.09
2122 2143 3.649277 GAGCCGCCGAAGAAGAGCA 62.649 63.158 0.00 0.00 0.00 4.26
2123 2144 3.491652 GCCGCCGAAGAAGAGCAC 61.492 66.667 0.00 0.00 0.00 4.40
2124 2145 3.181967 CCGCCGAAGAAGAGCACG 61.182 66.667 0.00 0.00 0.00 5.34
2125 2146 2.126463 CGCCGAAGAAGAGCACGA 60.126 61.111 0.00 0.00 0.00 4.35
2126 2147 1.733041 CGCCGAAGAAGAGCACGAA 60.733 57.895 0.00 0.00 0.00 3.85
2127 2148 1.078759 CGCCGAAGAAGAGCACGAAT 61.079 55.000 0.00 0.00 0.00 3.34
2128 2149 0.371645 GCCGAAGAAGAGCACGAATG 59.628 55.000 0.00 0.00 0.00 2.67
2141 2162 1.003116 CACGAATGCATAAGCTGGAGC 60.003 52.381 0.00 0.00 42.74 4.70
2142 2163 0.590195 CGAATGCATAAGCTGGAGCC 59.410 55.000 0.00 0.00 43.38 4.70
2143 2164 0.590195 GAATGCATAAGCTGGAGCCG 59.410 55.000 0.00 0.00 43.38 5.52
2144 2165 0.107017 AATGCATAAGCTGGAGCCGT 60.107 50.000 0.00 0.00 43.38 5.68
2145 2166 0.107017 ATGCATAAGCTGGAGCCGTT 60.107 50.000 0.00 0.00 43.38 4.44
2146 2167 1.026182 TGCATAAGCTGGAGCCGTTG 61.026 55.000 0.00 0.00 43.38 4.10
2147 2168 0.744414 GCATAAGCTGGAGCCGTTGA 60.744 55.000 0.00 0.00 43.38 3.18
2148 2169 1.009829 CATAAGCTGGAGCCGTTGAC 58.990 55.000 0.00 0.00 43.38 3.18
2149 2170 0.107654 ATAAGCTGGAGCCGTTGACC 60.108 55.000 0.00 0.00 43.38 4.02
2150 2171 1.192146 TAAGCTGGAGCCGTTGACCT 61.192 55.000 0.00 0.00 43.38 3.85
2151 2172 2.435059 GCTGGAGCCGTTGACCTC 60.435 66.667 0.00 0.00 34.31 3.85
2152 2173 2.266055 CTGGAGCCGTTGACCTCC 59.734 66.667 0.00 0.00 46.25 4.30
2153 2174 3.316573 CTGGAGCCGTTGACCTCCC 62.317 68.421 4.40 0.00 45.64 4.30
2154 2175 3.003763 GGAGCCGTTGACCTCCCT 61.004 66.667 0.00 0.00 41.42 4.20
2155 2176 2.266055 GAGCCGTTGACCTCCCTG 59.734 66.667 0.00 0.00 0.00 4.45
2156 2177 2.203788 AGCCGTTGACCTCCCTGA 60.204 61.111 0.00 0.00 0.00 3.86
2157 2178 1.827399 GAGCCGTTGACCTCCCTGAA 61.827 60.000 0.00 0.00 0.00 3.02
2158 2179 1.376037 GCCGTTGACCTCCCTGAAG 60.376 63.158 0.00 0.00 0.00 3.02
2159 2180 1.376037 CCGTTGACCTCCCTGAAGC 60.376 63.158 0.00 0.00 0.00 3.86
2160 2181 1.371183 CGTTGACCTCCCTGAAGCA 59.629 57.895 0.00 0.00 0.00 3.91
2161 2182 0.671781 CGTTGACCTCCCTGAAGCAG 60.672 60.000 0.00 0.00 0.00 4.24
2162 2183 0.398318 GTTGACCTCCCTGAAGCAGT 59.602 55.000 0.00 0.00 0.00 4.40
2163 2184 0.397941 TTGACCTCCCTGAAGCAGTG 59.602 55.000 0.00 0.00 0.00 3.66
2164 2185 1.376553 GACCTCCCTGAAGCAGTGC 60.377 63.158 7.13 7.13 0.00 4.40
2165 2186 2.116983 GACCTCCCTGAAGCAGTGCA 62.117 60.000 19.20 0.00 0.00 4.57
2166 2187 1.302285 CCTCCCTGAAGCAGTGCAT 59.698 57.895 19.20 4.82 0.00 3.96
2167 2188 0.543277 CCTCCCTGAAGCAGTGCATA 59.457 55.000 19.20 1.65 0.00 3.14
2168 2189 1.065199 CCTCCCTGAAGCAGTGCATAA 60.065 52.381 19.20 0.00 0.00 1.90
2169 2190 2.012673 CTCCCTGAAGCAGTGCATAAC 58.987 52.381 19.20 5.93 0.00 1.89
2170 2191 1.098050 CCCTGAAGCAGTGCATAACC 58.902 55.000 19.20 1.70 0.00 2.85
2171 2192 1.340405 CCCTGAAGCAGTGCATAACCT 60.340 52.381 19.20 0.00 0.00 3.50
2172 2193 1.741706 CCTGAAGCAGTGCATAACCTG 59.258 52.381 19.20 5.23 0.00 4.00
2183 2204 2.380084 CATAACCTGCACGTACCTGT 57.620 50.000 0.00 0.00 0.00 4.00
2184 2205 3.513680 CATAACCTGCACGTACCTGTA 57.486 47.619 0.00 0.00 0.00 2.74
2185 2206 3.184541 CATAACCTGCACGTACCTGTAC 58.815 50.000 0.00 0.00 0.00 2.90
2186 2207 1.042229 AACCTGCACGTACCTGTACA 58.958 50.000 8.09 0.00 35.87 2.90
2187 2208 0.601558 ACCTGCACGTACCTGTACAG 59.398 55.000 16.34 16.34 35.87 2.74
2197 2218 2.846371 CCTGTACAGGTGCTGCTTC 58.154 57.895 30.57 0.00 43.61 3.86
2198 2219 0.322975 CCTGTACAGGTGCTGCTTCT 59.677 55.000 30.57 0.00 43.61 2.85
2199 2220 1.271054 CCTGTACAGGTGCTGCTTCTT 60.271 52.381 30.57 0.00 43.61 2.52
2200 2221 1.802960 CTGTACAGGTGCTGCTTCTTG 59.197 52.381 15.49 3.77 34.37 3.02
2201 2222 0.519077 GTACAGGTGCTGCTTCTTGC 59.481 55.000 0.00 0.00 43.25 4.01
2202 2223 0.606401 TACAGGTGCTGCTTCTTGCC 60.606 55.000 0.00 0.00 42.00 4.52
2203 2224 1.900016 CAGGTGCTGCTTCTTGCCA 60.900 57.895 0.00 0.00 42.00 4.92
2204 2225 1.602888 AGGTGCTGCTTCTTGCCAG 60.603 57.895 0.00 0.00 42.00 4.85
2205 2226 2.257676 GTGCTGCTTCTTGCCAGC 59.742 61.111 0.00 5.73 42.19 4.85
2206 2227 2.987547 TGCTGCTTCTTGCCAGCC 60.988 61.111 9.78 0.00 41.63 4.85
2207 2228 3.756727 GCTGCTTCTTGCCAGCCC 61.757 66.667 1.38 0.00 42.00 5.19
2208 2229 2.035312 CTGCTTCTTGCCAGCCCT 59.965 61.111 0.00 0.00 42.00 5.19
2209 2230 2.034687 TGCTTCTTGCCAGCCCTC 59.965 61.111 0.00 0.00 42.00 4.30
2210 2231 2.034687 GCTTCTTGCCAGCCCTCA 59.965 61.111 0.00 0.00 35.15 3.86
2211 2232 1.379576 GCTTCTTGCCAGCCCTCAT 60.380 57.895 0.00 0.00 35.15 2.90
2212 2233 1.664321 GCTTCTTGCCAGCCCTCATG 61.664 60.000 0.00 0.00 35.15 3.07
2213 2234 1.664321 CTTCTTGCCAGCCCTCATGC 61.664 60.000 0.00 0.00 0.00 4.06
2214 2235 3.515286 CTTGCCAGCCCTCATGCG 61.515 66.667 0.00 0.00 36.02 4.73
2215 2236 4.349503 TTGCCAGCCCTCATGCGT 62.350 61.111 0.00 0.00 36.02 5.24
2216 2237 3.866379 TTGCCAGCCCTCATGCGTT 62.866 57.895 0.00 0.00 36.02 4.84
2217 2238 3.818787 GCCAGCCCTCATGCGTTG 61.819 66.667 0.00 0.00 36.02 4.10
2218 2239 2.360350 CCAGCCCTCATGCGTTGT 60.360 61.111 0.00 0.00 36.02 3.32
2219 2240 2.693762 CCAGCCCTCATGCGTTGTG 61.694 63.158 0.00 0.00 36.02 3.33
2220 2241 2.360350 AGCCCTCATGCGTTGTGG 60.360 61.111 0.00 1.61 38.48 4.17
2221 2242 2.359850 GCCCTCATGCGTTGTGGA 60.360 61.111 8.65 0.00 40.75 4.02
2222 2243 2.690778 GCCCTCATGCGTTGTGGAC 61.691 63.158 8.65 0.00 40.75 4.02
2231 2252 2.629763 GTTGTGGACGACGTTGGC 59.370 61.111 7.90 3.25 0.00 4.52
2232 2253 2.962786 TTGTGGACGACGTTGGCG 60.963 61.111 7.90 0.00 44.93 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
209 212 5.579564 TTTTTACTTTTACGGGTGCTGTT 57.420 34.783 0.00 0.00 0.00 3.16
237 241 9.898152 CATAATTAGAAGGAAGGAACTCTCTTT 57.102 33.333 0.00 0.00 38.49 2.52
238 242 7.990314 GCATAATTAGAAGGAAGGAACTCTCTT 59.010 37.037 0.00 0.00 38.49 2.85
239 243 7.505258 GCATAATTAGAAGGAAGGAACTCTCT 58.495 38.462 0.00 0.00 38.49 3.10
336 341 9.210426 CTTGATGCGTGTATATTTTTGAAGTAC 57.790 33.333 0.00 0.00 0.00 2.73
760 778 6.346919 CGAAAGTGTAGCTGGCAATGATATAC 60.347 42.308 0.00 0.00 0.00 1.47
764 784 2.679837 CGAAAGTGTAGCTGGCAATGAT 59.320 45.455 0.00 0.00 0.00 2.45
852 872 4.624015 CACAAAAGAGCAACCATGAACAT 58.376 39.130 0.00 0.00 0.00 2.71
878 898 3.181450 GCCCAATCACTACAAGATAGCCT 60.181 47.826 0.00 0.00 0.00 4.58
917 937 4.002906 TGGAGAAAATACACGCAAGAGT 57.997 40.909 0.00 0.00 45.26 3.24
946 966 8.194104 TGTCAGTGCAACAAACATAAAAGTATT 58.806 29.630 0.00 0.00 41.43 1.89
950 970 6.884096 TTGTCAGTGCAACAAACATAAAAG 57.116 33.333 0.00 0.00 41.43 2.27
1020 1040 2.224843 ACTTGAGTTGGCATGATGGTCA 60.225 45.455 0.00 0.00 0.00 4.02
1120 1140 4.808364 CCAAGAAATTTTGTCGCTTTTGGA 59.192 37.500 0.00 0.00 35.69 3.53
1252 1272 1.402968 AGAGCATGCAAATTGTAGCGG 59.597 47.619 21.98 0.00 0.00 5.52
1287 1307 9.675464 TCGTGGTCTAGGTTATTTGAATTTATT 57.325 29.630 0.00 0.00 0.00 1.40
1289 1309 9.504708 TTTCGTGGTCTAGGTTATTTGAATTTA 57.495 29.630 0.00 0.00 0.00 1.40
1328 1348 2.639065 ACATCAAATATTGACGGGCGT 58.361 42.857 0.00 0.00 43.48 5.68
1343 1363 4.946160 AAGGAGTTTCCCCATTACATCA 57.054 40.909 0.00 0.00 37.19 3.07
1356 1376 8.160106 ACTCATGTATCTTCTCAAAAGGAGTTT 58.840 33.333 0.00 0.00 44.40 2.66
1409 1429 9.075519 ACAATTCATGCAATCTAACAAAATACG 57.924 29.630 0.00 0.00 0.00 3.06
1453 1474 3.077543 AGGCCCCAGACTTCCTTATTTTT 59.922 43.478 0.00 0.00 0.00 1.94
1458 1479 1.755200 AAAGGCCCCAGACTTCCTTA 58.245 50.000 0.00 0.00 37.91 2.69
1480 1501 8.038351 CAGACTTAACCCCTTTCTTTTCAAAAA 58.962 33.333 0.00 0.00 0.00 1.94
1481 1502 7.364320 CCAGACTTAACCCCTTTCTTTTCAAAA 60.364 37.037 0.00 0.00 0.00 2.44
1482 1503 6.097696 CCAGACTTAACCCCTTTCTTTTCAAA 59.902 38.462 0.00 0.00 0.00 2.69
1483 1504 5.596772 CCAGACTTAACCCCTTTCTTTTCAA 59.403 40.000 0.00 0.00 0.00 2.69
1484 1505 5.137551 CCAGACTTAACCCCTTTCTTTTCA 58.862 41.667 0.00 0.00 0.00 2.69
1485 1506 4.523173 CCCAGACTTAACCCCTTTCTTTTC 59.477 45.833 0.00 0.00 0.00 2.29
1486 1507 4.480115 CCCAGACTTAACCCCTTTCTTTT 58.520 43.478 0.00 0.00 0.00 2.27
1487 1508 3.181422 CCCCAGACTTAACCCCTTTCTTT 60.181 47.826 0.00 0.00 0.00 2.52
1488 1509 2.378886 CCCCAGACTTAACCCCTTTCTT 59.621 50.000 0.00 0.00 0.00 2.52
1489 1510 1.993301 CCCCAGACTTAACCCCTTTCT 59.007 52.381 0.00 0.00 0.00 2.52
1490 1511 1.709115 ACCCCAGACTTAACCCCTTTC 59.291 52.381 0.00 0.00 0.00 2.62
1491 1512 1.709115 GACCCCAGACTTAACCCCTTT 59.291 52.381 0.00 0.00 0.00 3.11
1492 1513 1.132168 AGACCCCAGACTTAACCCCTT 60.132 52.381 0.00 0.00 0.00 3.95
1493 1514 0.496841 AGACCCCAGACTTAACCCCT 59.503 55.000 0.00 0.00 0.00 4.79
1494 1515 0.910338 GAGACCCCAGACTTAACCCC 59.090 60.000 0.00 0.00 0.00 4.95
1495 1516 1.555533 CAGAGACCCCAGACTTAACCC 59.444 57.143 0.00 0.00 0.00 4.11
1496 1517 2.258109 ACAGAGACCCCAGACTTAACC 58.742 52.381 0.00 0.00 0.00 2.85
1497 1518 4.353383 AAACAGAGACCCCAGACTTAAC 57.647 45.455 0.00 0.00 0.00 2.01
1498 1519 4.445735 CCAAAACAGAGACCCCAGACTTAA 60.446 45.833 0.00 0.00 0.00 1.85
1499 1520 3.072476 CCAAAACAGAGACCCCAGACTTA 59.928 47.826 0.00 0.00 0.00 2.24
1500 1521 2.158608 CCAAAACAGAGACCCCAGACTT 60.159 50.000 0.00 0.00 0.00 3.01
1501 1522 1.421646 CCAAAACAGAGACCCCAGACT 59.578 52.381 0.00 0.00 0.00 3.24
1502 1523 1.897560 CCAAAACAGAGACCCCAGAC 58.102 55.000 0.00 0.00 0.00 3.51
1503 1524 0.110486 GCCAAAACAGAGACCCCAGA 59.890 55.000 0.00 0.00 0.00 3.86
1504 1525 0.111253 AGCCAAAACAGAGACCCCAG 59.889 55.000 0.00 0.00 0.00 4.45
1505 1526 0.178992 CAGCCAAAACAGAGACCCCA 60.179 55.000 0.00 0.00 0.00 4.96
1506 1527 0.178990 ACAGCCAAAACAGAGACCCC 60.179 55.000 0.00 0.00 0.00 4.95
1507 1528 2.427506 CTACAGCCAAAACAGAGACCC 58.572 52.381 0.00 0.00 0.00 4.46
1508 1529 1.807142 GCTACAGCCAAAACAGAGACC 59.193 52.381 0.00 0.00 34.31 3.85
1509 1530 2.772287 AGCTACAGCCAAAACAGAGAC 58.228 47.619 0.00 0.00 43.38 3.36
1510 1531 3.578716 AGTAGCTACAGCCAAAACAGAGA 59.421 43.478 25.28 0.00 43.38 3.10
1511 1532 3.681897 CAGTAGCTACAGCCAAAACAGAG 59.318 47.826 25.28 0.00 43.38 3.35
1512 1533 3.557054 CCAGTAGCTACAGCCAAAACAGA 60.557 47.826 25.28 0.00 43.38 3.41
1513 1534 2.744202 CCAGTAGCTACAGCCAAAACAG 59.256 50.000 25.28 0.00 43.38 3.16
1514 1535 2.105821 ACCAGTAGCTACAGCCAAAACA 59.894 45.455 25.28 0.00 43.38 2.83
1519 1540 2.233922 GAGAAACCAGTAGCTACAGCCA 59.766 50.000 25.28 0.00 43.38 4.75
1531 1552 7.489757 CGAAAGGTCTAGAATTAGAGAAACCAG 59.510 40.741 0.00 0.00 36.61 4.00
1534 1555 8.983307 TTCGAAAGGTCTAGAATTAGAGAAAC 57.017 34.615 0.00 0.00 36.61 2.78
1537 1558 8.967918 TGATTTCGAAAGGTCTAGAATTAGAGA 58.032 33.333 16.80 0.00 36.61 3.10
1538 1559 9.243637 CTGATTTCGAAAGGTCTAGAATTAGAG 57.756 37.037 16.80 0.00 36.61 2.43
1540 1561 9.587772 TTCTGATTTCGAAAGGTCTAGAATTAG 57.412 33.333 16.80 2.68 0.00 1.73
1556 1577 9.778993 ATGTGTTTATTTGAGATTCTGATTTCG 57.221 29.630 0.00 0.00 0.00 3.46
1574 1595 8.969260 ATTCTAGCATGAATCTGATGTGTTTA 57.031 30.769 0.00 0.00 31.72 2.01
1590 1611 7.440198 TCAATCTTCAGAATCGATTCTAGCAT 58.560 34.615 34.03 21.80 44.84 3.79
1620 1641 2.097825 CTTCTGAATTCCCTTGCCTGG 58.902 52.381 2.27 0.00 0.00 4.45
1628 1649 1.012841 CTCGCAGCTTCTGAATTCCC 58.987 55.000 2.27 0.00 32.44 3.97
1629 1650 1.731720 ACTCGCAGCTTCTGAATTCC 58.268 50.000 2.27 0.00 32.44 3.01
1630 1651 2.159599 CCAACTCGCAGCTTCTGAATTC 60.160 50.000 0.00 0.00 32.44 2.17
1631 1652 1.808945 CCAACTCGCAGCTTCTGAATT 59.191 47.619 0.00 0.00 32.44 2.17
1632 1653 1.446907 CCAACTCGCAGCTTCTGAAT 58.553 50.000 0.00 0.00 32.44 2.57
1633 1654 0.603707 CCCAACTCGCAGCTTCTGAA 60.604 55.000 0.00 0.00 32.44 3.02
1634 1655 1.004560 CCCAACTCGCAGCTTCTGA 60.005 57.895 0.00 0.00 32.44 3.27
1635 1656 2.684843 GCCCAACTCGCAGCTTCTG 61.685 63.158 0.00 0.00 34.12 3.02
1636 1657 2.359230 GCCCAACTCGCAGCTTCT 60.359 61.111 0.00 0.00 0.00 2.85
1637 1658 3.793144 CGCCCAACTCGCAGCTTC 61.793 66.667 0.00 0.00 0.00 3.86
1638 1659 3.612247 ATCGCCCAACTCGCAGCTT 62.612 57.895 0.00 0.00 0.00 3.74
1639 1660 3.612247 AATCGCCCAACTCGCAGCT 62.612 57.895 0.00 0.00 0.00 4.24
1640 1661 3.100862 GAATCGCCCAACTCGCAGC 62.101 63.158 0.00 0.00 0.00 5.25
1641 1662 1.298157 TTGAATCGCCCAACTCGCAG 61.298 55.000 0.00 0.00 0.00 5.18
1642 1663 1.302112 TTGAATCGCCCAACTCGCA 60.302 52.632 0.00 0.00 0.00 5.10
1643 1664 1.134694 GTTGAATCGCCCAACTCGC 59.865 57.895 0.00 0.00 40.37 5.03
1644 1665 1.419922 CGTTGAATCGCCCAACTCG 59.580 57.895 0.00 0.00 41.11 4.18
1645 1666 1.794222 CCGTTGAATCGCCCAACTC 59.206 57.895 0.00 0.00 41.11 3.01
1646 1667 2.332654 GCCGTTGAATCGCCCAACT 61.333 57.895 0.00 0.00 41.11 3.16
1647 1668 2.178273 GCCGTTGAATCGCCCAAC 59.822 61.111 0.00 0.00 40.19 3.77
1648 1669 3.059386 GGCCGTTGAATCGCCCAA 61.059 61.111 0.00 0.00 0.00 4.12
1651 1672 3.861263 GTCGGCCGTTGAATCGCC 61.861 66.667 27.15 0.00 0.00 5.54
1652 1673 2.799540 GAGTCGGCCGTTGAATCGC 61.800 63.158 27.15 7.95 0.00 4.58
1653 1674 1.153823 AGAGTCGGCCGTTGAATCG 60.154 57.895 27.15 0.00 35.71 3.34
1654 1675 1.696832 GCAGAGTCGGCCGTTGAATC 61.697 60.000 27.15 15.08 0.00 2.52
1655 1676 1.741770 GCAGAGTCGGCCGTTGAAT 60.742 57.895 27.15 4.64 0.00 2.57
1656 1677 2.357034 GCAGAGTCGGCCGTTGAA 60.357 61.111 27.15 1.49 0.00 2.69
1657 1678 3.573772 CTGCAGAGTCGGCCGTTGA 62.574 63.158 27.15 1.97 0.00 3.18
1658 1679 3.114616 CTGCAGAGTCGGCCGTTG 61.115 66.667 27.15 19.28 0.00 4.10
1659 1680 2.660258 AAACTGCAGAGTCGGCCGTT 62.660 55.000 27.15 16.88 39.82 4.44
1660 1681 3.165160 AAACTGCAGAGTCGGCCGT 62.165 57.895 27.15 6.47 0.00 5.68
1661 1682 2.357517 AAACTGCAGAGTCGGCCG 60.358 61.111 23.35 22.12 0.00 6.13
1662 1683 1.294659 CTCAAACTGCAGAGTCGGCC 61.295 60.000 23.35 0.00 0.00 6.13
1663 1684 0.601311 ACTCAAACTGCAGAGTCGGC 60.601 55.000 23.35 8.46 40.96 5.54
1664 1685 3.595691 ACTCAAACTGCAGAGTCGG 57.404 52.632 23.35 9.74 40.96 4.79
1668 1689 1.534595 GCAAGGACTCAAACTGCAGAG 59.465 52.381 23.35 10.14 37.87 3.35
1669 1690 1.597742 GCAAGGACTCAAACTGCAGA 58.402 50.000 23.35 0.00 0.00 4.26
1670 1691 0.595095 GGCAAGGACTCAAACTGCAG 59.405 55.000 13.48 13.48 0.00 4.41
1671 1692 0.823356 GGGCAAGGACTCAAACTGCA 60.823 55.000 0.00 0.00 0.00 4.41
1672 1693 0.538287 AGGGCAAGGACTCAAACTGC 60.538 55.000 0.00 0.00 0.00 4.40
1673 1694 1.242076 CAGGGCAAGGACTCAAACTG 58.758 55.000 0.00 0.00 0.00 3.16
1674 1695 0.111253 CCAGGGCAAGGACTCAAACT 59.889 55.000 0.00 0.00 0.00 2.66
1675 1696 0.178990 ACCAGGGCAAGGACTCAAAC 60.179 55.000 1.14 0.00 0.00 2.93
1676 1697 0.555769 AACCAGGGCAAGGACTCAAA 59.444 50.000 1.14 0.00 0.00 2.69
1677 1698 0.555769 AAACCAGGGCAAGGACTCAA 59.444 50.000 1.14 0.00 0.00 3.02
1678 1699 0.178992 CAAACCAGGGCAAGGACTCA 60.179 55.000 1.14 0.00 0.00 3.41
1679 1700 1.527433 GCAAACCAGGGCAAGGACTC 61.527 60.000 1.14 0.00 0.00 3.36
1680 1701 1.531602 GCAAACCAGGGCAAGGACT 60.532 57.895 1.14 0.00 0.00 3.85
1681 1702 1.809567 CTGCAAACCAGGGCAAGGAC 61.810 60.000 1.14 0.00 39.93 3.85
1682 1703 1.531365 CTGCAAACCAGGGCAAGGA 60.531 57.895 1.14 0.00 39.93 3.36
1683 1704 1.809567 GACTGCAAACCAGGGCAAGG 61.810 60.000 0.00 0.00 46.14 3.61
1684 1705 1.108727 TGACTGCAAACCAGGGCAAG 61.109 55.000 0.00 0.00 46.14 4.01
1685 1706 0.685785 TTGACTGCAAACCAGGGCAA 60.686 50.000 0.00 0.00 46.14 4.52
1686 1707 0.685785 TTTGACTGCAAACCAGGGCA 60.686 50.000 0.00 0.00 46.14 5.36
1687 1708 0.463620 TTTTGACTGCAAACCAGGGC 59.536 50.000 0.00 0.00 46.14 5.19
1688 1709 3.473923 AATTTTGACTGCAAACCAGGG 57.526 42.857 0.00 0.00 46.14 4.45
1689 1710 4.942852 TGTAATTTTGACTGCAAACCAGG 58.057 39.130 0.00 0.00 46.14 4.45
1690 1711 6.900568 TTTGTAATTTTGACTGCAAACCAG 57.099 33.333 0.00 0.00 43.27 4.00
1691 1712 7.672983 TTTTTGTAATTTTGACTGCAAACCA 57.327 28.000 0.00 0.00 43.27 3.67
1714 1735 7.121315 GCTGGGACTACTACTTGAATGATTTTT 59.879 37.037 0.00 0.00 0.00 1.94
1715 1736 6.599638 GCTGGGACTACTACTTGAATGATTTT 59.400 38.462 0.00 0.00 0.00 1.82
1716 1737 6.116126 GCTGGGACTACTACTTGAATGATTT 58.884 40.000 0.00 0.00 0.00 2.17
1717 1738 5.396884 GGCTGGGACTACTACTTGAATGATT 60.397 44.000 0.00 0.00 0.00 2.57
1718 1739 4.101741 GGCTGGGACTACTACTTGAATGAT 59.898 45.833 0.00 0.00 0.00 2.45
1719 1740 3.451178 GGCTGGGACTACTACTTGAATGA 59.549 47.826 0.00 0.00 0.00 2.57
1720 1741 3.197766 TGGCTGGGACTACTACTTGAATG 59.802 47.826 0.00 0.00 0.00 2.67
1721 1742 3.450904 TGGCTGGGACTACTACTTGAAT 58.549 45.455 0.00 0.00 0.00 2.57
1722 1743 2.897350 TGGCTGGGACTACTACTTGAA 58.103 47.619 0.00 0.00 0.00 2.69
1723 1744 2.615986 TGGCTGGGACTACTACTTGA 57.384 50.000 0.00 0.00 0.00 3.02
1724 1745 3.055094 ACAATGGCTGGGACTACTACTTG 60.055 47.826 0.00 0.00 0.00 3.16
1725 1746 3.182152 ACAATGGCTGGGACTACTACTT 58.818 45.455 0.00 0.00 0.00 2.24
1726 1747 2.766828 GACAATGGCTGGGACTACTACT 59.233 50.000 0.00 0.00 0.00 2.57
1727 1748 2.766828 AGACAATGGCTGGGACTACTAC 59.233 50.000 0.00 0.00 0.00 2.73
1728 1749 3.031736 GAGACAATGGCTGGGACTACTA 58.968 50.000 0.00 0.00 0.00 1.82
1729 1750 1.834263 GAGACAATGGCTGGGACTACT 59.166 52.381 0.00 0.00 0.00 2.57
1730 1751 1.834263 AGAGACAATGGCTGGGACTAC 59.166 52.381 0.00 0.00 0.00 2.73
1731 1752 2.111384 GAGAGACAATGGCTGGGACTA 58.889 52.381 0.00 0.00 0.00 2.59
1732 1753 0.908198 GAGAGACAATGGCTGGGACT 59.092 55.000 0.00 0.00 0.00 3.85
1733 1754 0.908198 AGAGAGACAATGGCTGGGAC 59.092 55.000 0.00 0.00 0.00 4.46
1734 1755 1.198713 GAGAGAGACAATGGCTGGGA 58.801 55.000 0.00 0.00 0.00 4.37
1735 1756 1.138661 GAGAGAGAGACAATGGCTGGG 59.861 57.143 0.00 0.00 0.00 4.45
1736 1757 1.202394 CGAGAGAGAGACAATGGCTGG 60.202 57.143 0.00 0.00 0.00 4.85
1737 1758 1.802136 GCGAGAGAGAGACAATGGCTG 60.802 57.143 0.00 0.00 0.00 4.85
1738 1759 0.459489 GCGAGAGAGAGACAATGGCT 59.541 55.000 0.00 0.00 0.00 4.75
1739 1760 0.459489 AGCGAGAGAGAGACAATGGC 59.541 55.000 0.00 0.00 0.00 4.40
1740 1761 4.545610 GAATAGCGAGAGAGAGACAATGG 58.454 47.826 0.00 0.00 0.00 3.16
1741 1762 4.278170 AGGAATAGCGAGAGAGAGACAATG 59.722 45.833 0.00 0.00 0.00 2.82
1742 1763 4.469657 AGGAATAGCGAGAGAGAGACAAT 58.530 43.478 0.00 0.00 0.00 2.71
1743 1764 3.880490 GAGGAATAGCGAGAGAGAGACAA 59.120 47.826 0.00 0.00 0.00 3.18
1744 1765 3.472652 GAGGAATAGCGAGAGAGAGACA 58.527 50.000 0.00 0.00 0.00 3.41
1745 1766 2.812011 GGAGGAATAGCGAGAGAGAGAC 59.188 54.545 0.00 0.00 0.00 3.36
1746 1767 2.439880 TGGAGGAATAGCGAGAGAGAGA 59.560 50.000 0.00 0.00 0.00 3.10
1747 1768 2.857483 TGGAGGAATAGCGAGAGAGAG 58.143 52.381 0.00 0.00 0.00 3.20
1748 1769 2.952978 GTTGGAGGAATAGCGAGAGAGA 59.047 50.000 0.00 0.00 0.00 3.10
1749 1770 2.690497 TGTTGGAGGAATAGCGAGAGAG 59.310 50.000 0.00 0.00 0.00 3.20
1750 1771 2.690497 CTGTTGGAGGAATAGCGAGAGA 59.310 50.000 0.00 0.00 0.00 3.10
1751 1772 2.801342 GCTGTTGGAGGAATAGCGAGAG 60.801 54.545 0.00 0.00 38.81 3.20
1752 1773 1.137086 GCTGTTGGAGGAATAGCGAGA 59.863 52.381 0.00 0.00 38.81 4.04
1753 1774 1.576356 GCTGTTGGAGGAATAGCGAG 58.424 55.000 0.00 0.00 38.81 5.03
1754 1775 0.178068 GGCTGTTGGAGGAATAGCGA 59.822 55.000 0.00 0.00 46.92 4.93
1755 1776 1.154205 CGGCTGTTGGAGGAATAGCG 61.154 60.000 0.00 0.00 46.92 4.26
1756 1777 1.440145 GCGGCTGTTGGAGGAATAGC 61.440 60.000 0.00 0.00 45.62 2.97
1757 1778 0.815615 GGCGGCTGTTGGAGGAATAG 60.816 60.000 0.00 0.00 0.00 1.73
1758 1779 1.223487 GGCGGCTGTTGGAGGAATA 59.777 57.895 0.00 0.00 0.00 1.75
1759 1780 2.044946 GGCGGCTGTTGGAGGAAT 60.045 61.111 0.00 0.00 0.00 3.01
1760 1781 4.697756 CGGCGGCTGTTGGAGGAA 62.698 66.667 7.61 0.00 0.00 3.36
1763 1784 3.726517 CAACGGCGGCTGTTGGAG 61.727 66.667 35.79 18.51 44.30 3.86
1784 1805 1.136500 GTAACTGGAGGATGACGGGAC 59.864 57.143 0.00 0.00 0.00 4.46
1785 1806 1.006758 AGTAACTGGAGGATGACGGGA 59.993 52.381 0.00 0.00 0.00 5.14
1786 1807 1.409427 GAGTAACTGGAGGATGACGGG 59.591 57.143 0.00 0.00 0.00 5.28
1787 1808 1.409427 GGAGTAACTGGAGGATGACGG 59.591 57.143 0.00 0.00 0.00 4.79
1788 1809 2.359531 GAGGAGTAACTGGAGGATGACG 59.640 54.545 0.00 0.00 0.00 4.35
1789 1810 3.634910 GAGAGGAGTAACTGGAGGATGAC 59.365 52.174 0.00 0.00 0.00 3.06
1790 1811 3.373220 GGAGAGGAGTAACTGGAGGATGA 60.373 52.174 0.00 0.00 0.00 2.92
1791 1812 2.962421 GGAGAGGAGTAACTGGAGGATG 59.038 54.545 0.00 0.00 0.00 3.51
1792 1813 2.090999 GGGAGAGGAGTAACTGGAGGAT 60.091 54.545 0.00 0.00 0.00 3.24
1793 1814 1.288335 GGGAGAGGAGTAACTGGAGGA 59.712 57.143 0.00 0.00 0.00 3.71
1794 1815 1.689892 GGGGAGAGGAGTAACTGGAGG 60.690 61.905 0.00 0.00 0.00 4.30
1795 1816 1.289530 AGGGGAGAGGAGTAACTGGAG 59.710 57.143 0.00 0.00 0.00 3.86
1796 1817 1.288335 GAGGGGAGAGGAGTAACTGGA 59.712 57.143 0.00 0.00 0.00 3.86
1797 1818 1.289530 AGAGGGGAGAGGAGTAACTGG 59.710 57.143 0.00 0.00 0.00 4.00
1798 1819 2.661718 GAGAGGGGAGAGGAGTAACTG 58.338 57.143 0.00 0.00 0.00 3.16
1799 1820 1.213430 CGAGAGGGGAGAGGAGTAACT 59.787 57.143 0.00 0.00 0.00 2.24
1800 1821 1.064537 ACGAGAGGGGAGAGGAGTAAC 60.065 57.143 0.00 0.00 0.00 2.50
1801 1822 1.212441 GACGAGAGGGGAGAGGAGTAA 59.788 57.143 0.00 0.00 0.00 2.24
1802 1823 0.838608 GACGAGAGGGGAGAGGAGTA 59.161 60.000 0.00 0.00 0.00 2.59
1803 1824 0.917333 AGACGAGAGGGGAGAGGAGT 60.917 60.000 0.00 0.00 0.00 3.85
1804 1825 0.179029 GAGACGAGAGGGGAGAGGAG 60.179 65.000 0.00 0.00 0.00 3.69
1805 1826 0.622154 AGAGACGAGAGGGGAGAGGA 60.622 60.000 0.00 0.00 0.00 3.71
1806 1827 0.179029 GAGAGACGAGAGGGGAGAGG 60.179 65.000 0.00 0.00 0.00 3.69
1807 1828 0.179029 GGAGAGACGAGAGGGGAGAG 60.179 65.000 0.00 0.00 0.00 3.20
1808 1829 1.637724 GGGAGAGACGAGAGGGGAGA 61.638 65.000 0.00 0.00 0.00 3.71
1809 1830 1.152839 GGGAGAGACGAGAGGGGAG 60.153 68.421 0.00 0.00 0.00 4.30
1810 1831 3.008408 GGGAGAGACGAGAGGGGA 58.992 66.667 0.00 0.00 0.00 4.81
1811 1832 2.517402 CGGGAGAGACGAGAGGGG 60.517 72.222 0.00 0.00 0.00 4.79
1812 1833 1.820481 GACGGGAGAGACGAGAGGG 60.820 68.421 0.00 0.00 34.93 4.30
1813 1834 2.174969 CGACGGGAGAGACGAGAGG 61.175 68.421 0.00 0.00 34.93 3.69
1814 1835 2.174969 CCGACGGGAGAGACGAGAG 61.175 68.421 5.81 0.00 34.06 3.20
1815 1836 2.125229 CCGACGGGAGAGACGAGA 60.125 66.667 5.81 0.00 34.06 4.04
1816 1837 2.436292 ACCGACGGGAGAGACGAG 60.436 66.667 20.00 0.00 36.97 4.18
1817 1838 2.171209 TACACCGACGGGAGAGACGA 62.171 60.000 20.00 0.00 36.97 4.20
1818 1839 1.742880 TACACCGACGGGAGAGACG 60.743 63.158 20.00 0.00 36.97 4.18
1819 1840 1.799383 GTACACCGACGGGAGAGAC 59.201 63.158 20.00 10.05 36.97 3.36
1820 1841 1.742880 CGTACACCGACGGGAGAGA 60.743 63.158 20.00 1.72 39.19 3.10
1821 1842 1.703438 CTCGTACACCGACGGGAGAG 61.703 65.000 20.00 14.09 46.57 3.20
1822 1843 1.742880 CTCGTACACCGACGGGAGA 60.743 63.158 20.00 8.63 46.57 3.71
1823 1844 2.789917 CTCGTACACCGACGGGAG 59.210 66.667 20.00 12.88 46.57 4.30
1825 1846 2.758089 CCTCTCGTACACCGACGGG 61.758 68.421 20.00 9.81 44.94 5.28
1826 1847 2.037136 ACCTCTCGTACACCGACGG 61.037 63.158 13.61 13.61 41.60 4.79
1827 1848 1.134075 CACCTCTCGTACACCGACG 59.866 63.158 0.00 0.00 41.60 5.12
1828 1849 1.154073 GCACCTCTCGTACACCGAC 60.154 63.158 0.00 0.00 41.60 4.79
1829 1850 1.601477 TGCACCTCTCGTACACCGA 60.601 57.895 0.00 0.00 45.00 4.69
1830 1851 1.443872 GTGCACCTCTCGTACACCG 60.444 63.158 5.22 0.00 33.24 4.94
1831 1852 0.388649 CAGTGCACCTCTCGTACACC 60.389 60.000 14.63 0.00 39.27 4.16
1832 1853 0.388649 CCAGTGCACCTCTCGTACAC 60.389 60.000 14.63 0.00 38.81 2.90
1833 1854 1.964448 CCAGTGCACCTCTCGTACA 59.036 57.895 14.63 0.00 0.00 2.90
1834 1855 1.446272 GCCAGTGCACCTCTCGTAC 60.446 63.158 14.63 0.00 37.47 3.67
1835 1856 2.646175 GGCCAGTGCACCTCTCGTA 61.646 63.158 14.63 0.00 40.13 3.43
1836 1857 4.008933 GGCCAGTGCACCTCTCGT 62.009 66.667 14.63 0.00 40.13 4.18
1837 1858 3.320879 ATGGCCAGTGCACCTCTCG 62.321 63.158 14.63 0.00 40.13 4.04
1838 1859 1.748122 CATGGCCAGTGCACCTCTC 60.748 63.158 14.63 1.93 40.13 3.20
1839 1860 2.353958 CATGGCCAGTGCACCTCT 59.646 61.111 14.63 0.00 40.13 3.69
1840 1861 2.753043 CCATGGCCAGTGCACCTC 60.753 66.667 14.63 2.38 40.13 3.85
1841 1862 3.259314 TCCATGGCCAGTGCACCT 61.259 61.111 14.63 0.00 40.13 4.00
1842 1863 3.064324 GTCCATGGCCAGTGCACC 61.064 66.667 14.63 0.00 40.13 5.01
1843 1864 1.660560 GATGTCCATGGCCAGTGCAC 61.661 60.000 13.05 9.40 40.13 4.57
1844 1865 1.378911 GATGTCCATGGCCAGTGCA 60.379 57.895 13.05 8.09 40.13 4.57
1845 1866 2.475466 CGATGTCCATGGCCAGTGC 61.475 63.158 13.05 1.69 0.00 4.40
1846 1867 1.820906 CCGATGTCCATGGCCAGTG 60.821 63.158 13.05 9.85 0.00 3.66
1847 1868 2.591753 CCGATGTCCATGGCCAGT 59.408 61.111 13.05 0.00 0.00 4.00
1848 1869 2.903855 GCCGATGTCCATGGCCAG 60.904 66.667 13.05 3.10 43.06 4.85
1852 1873 0.469917 AAGTAGGCCGATGTCCATGG 59.530 55.000 4.97 4.97 0.00 3.66
1853 1874 2.213499 GAAAGTAGGCCGATGTCCATG 58.787 52.381 0.00 0.00 0.00 3.66
1854 1875 1.141053 GGAAAGTAGGCCGATGTCCAT 59.859 52.381 8.73 0.00 0.00 3.41
1855 1876 0.539986 GGAAAGTAGGCCGATGTCCA 59.460 55.000 8.73 0.00 0.00 4.02
1856 1877 0.179054 GGGAAAGTAGGCCGATGTCC 60.179 60.000 0.00 0.79 0.00 4.02
1857 1878 0.539986 TGGGAAAGTAGGCCGATGTC 59.460 55.000 0.00 0.00 0.00 3.06
1858 1879 0.252197 GTGGGAAAGTAGGCCGATGT 59.748 55.000 0.00 0.00 0.00 3.06
1859 1880 0.251916 TGTGGGAAAGTAGGCCGATG 59.748 55.000 0.00 0.00 0.00 3.84
1860 1881 0.541863 CTGTGGGAAAGTAGGCCGAT 59.458 55.000 0.00 0.00 0.00 4.18
1861 1882 1.550130 CCTGTGGGAAAGTAGGCCGA 61.550 60.000 0.00 0.00 33.58 5.54
1862 1883 1.078426 CCTGTGGGAAAGTAGGCCG 60.078 63.158 0.00 0.00 33.58 6.13
1863 1884 0.035343 GACCTGTGGGAAAGTAGGCC 60.035 60.000 0.00 0.00 33.57 5.19
1864 1885 0.035343 GGACCTGTGGGAAAGTAGGC 60.035 60.000 0.00 0.00 33.57 3.93
1865 1886 1.555533 GAGGACCTGTGGGAAAGTAGG 59.444 57.143 0.00 0.00 36.25 3.18
1866 1887 1.555533 GGAGGACCTGTGGGAAAGTAG 59.444 57.143 0.00 0.00 36.25 2.57
1867 1888 1.151413 AGGAGGACCTGTGGGAAAGTA 59.849 52.381 0.00 0.00 45.92 2.24
1868 1889 0.104409 AGGAGGACCTGTGGGAAAGT 60.104 55.000 0.00 0.00 45.92 2.66
1869 1890 2.778899 AGGAGGACCTGTGGGAAAG 58.221 57.895 0.00 0.00 45.92 2.62
1879 1900 3.391382 CACCACGGGAGGAGGACC 61.391 72.222 0.00 0.00 33.91 4.46
1880 1901 4.083862 GCACCACGGGAGGAGGAC 62.084 72.222 0.00 0.00 33.91 3.85
1894 1915 4.101448 ACGGGAGCTCATGGGCAC 62.101 66.667 22.09 14.30 34.17 5.01
1895 1916 3.785859 GACGGGAGCTCATGGGCA 61.786 66.667 22.09 0.00 34.17 5.36
1896 1917 4.899239 CGACGGGAGCTCATGGGC 62.899 72.222 17.19 10.42 0.00 5.36
1897 1918 4.227134 CCGACGGGAGCTCATGGG 62.227 72.222 17.19 7.27 34.06 4.00
1898 1919 3.147595 TCCGACGGGAGCTCATGG 61.148 66.667 17.19 9.16 37.43 3.66
1906 1927 0.750850 GATTTGATCCTCCGACGGGA 59.249 55.000 15.25 4.48 41.08 5.14
1907 1928 0.464036 TGATTTGATCCTCCGACGGG 59.536 55.000 15.25 4.64 0.00 5.28
1908 1929 1.539065 CCTGATTTGATCCTCCGACGG 60.539 57.143 7.84 7.84 0.00 4.79
1909 1930 1.539065 CCCTGATTTGATCCTCCGACG 60.539 57.143 0.00 0.00 0.00 5.12
1910 1931 1.811941 GCCCTGATTTGATCCTCCGAC 60.812 57.143 0.00 0.00 0.00 4.79
1911 1932 0.469917 GCCCTGATTTGATCCTCCGA 59.530 55.000 0.00 0.00 0.00 4.55
1912 1933 0.181114 TGCCCTGATTTGATCCTCCG 59.819 55.000 0.00 0.00 0.00 4.63
1913 1934 2.027385 GTTGCCCTGATTTGATCCTCC 58.973 52.381 0.00 0.00 0.00 4.30
1914 1935 2.027385 GGTTGCCCTGATTTGATCCTC 58.973 52.381 0.00 0.00 0.00 3.71
1915 1936 1.358787 TGGTTGCCCTGATTTGATCCT 59.641 47.619 0.00 0.00 0.00 3.24
1916 1937 1.753073 CTGGTTGCCCTGATTTGATCC 59.247 52.381 0.00 0.00 31.55 3.36
1917 1938 1.135721 GCTGGTTGCCCTGATTTGATC 59.864 52.381 0.00 0.00 35.15 2.92
1918 1939 1.188863 GCTGGTTGCCCTGATTTGAT 58.811 50.000 0.00 0.00 35.15 2.57
1919 1940 0.178967 TGCTGGTTGCCCTGATTTGA 60.179 50.000 0.00 0.00 42.00 2.69
1920 1941 0.245539 CTGCTGGTTGCCCTGATTTG 59.754 55.000 0.00 0.00 42.00 2.32
1921 1942 0.901580 CCTGCTGGTTGCCCTGATTT 60.902 55.000 0.51 0.00 42.00 2.17
1922 1943 1.304713 CCTGCTGGTTGCCCTGATT 60.305 57.895 0.51 0.00 42.00 2.57
1923 1944 2.357836 CCTGCTGGTTGCCCTGAT 59.642 61.111 0.51 0.00 42.00 2.90
1924 1945 4.666253 GCCTGCTGGTTGCCCTGA 62.666 66.667 11.69 0.00 42.00 3.86
1942 1963 4.351938 TCGTCCTTCACCACGCCG 62.352 66.667 0.00 0.00 35.93 6.46
1943 1964 2.737376 GTCGTCCTTCACCACGCC 60.737 66.667 0.00 0.00 35.93 5.68
1944 1965 2.737376 GGTCGTCCTTCACCACGC 60.737 66.667 0.00 0.00 35.93 5.34
1945 1966 0.944311 CTTGGTCGTCCTTCACCACG 60.944 60.000 0.00 0.00 42.61 4.94
1946 1967 1.228657 GCTTGGTCGTCCTTCACCAC 61.229 60.000 0.00 0.00 42.61 4.16
1947 1968 1.070786 GCTTGGTCGTCCTTCACCA 59.929 57.895 0.00 0.00 41.13 4.17
1948 1969 2.027625 CGCTTGGTCGTCCTTCACC 61.028 63.158 0.00 0.00 34.23 4.02
1949 1970 2.027625 CCGCTTGGTCGTCCTTCAC 61.028 63.158 0.00 0.00 34.23 3.18
1950 1971 1.541310 ATCCGCTTGGTCGTCCTTCA 61.541 55.000 0.00 0.00 34.23 3.02
1951 1972 1.084370 CATCCGCTTGGTCGTCCTTC 61.084 60.000 0.00 0.00 34.23 3.46
1952 1973 1.079127 CATCCGCTTGGTCGTCCTT 60.079 57.895 0.00 0.00 34.23 3.36
1953 1974 1.541310 TTCATCCGCTTGGTCGTCCT 61.541 55.000 0.00 0.00 34.23 3.85
1954 1975 0.672401 TTTCATCCGCTTGGTCGTCC 60.672 55.000 0.00 0.00 0.00 4.79
1955 1976 0.721718 CTTTCATCCGCTTGGTCGTC 59.278 55.000 0.00 0.00 0.00 4.20
1956 1977 0.673644 CCTTTCATCCGCTTGGTCGT 60.674 55.000 0.00 0.00 0.00 4.34
1957 1978 0.673644 ACCTTTCATCCGCTTGGTCG 60.674 55.000 0.00 0.00 0.00 4.79
1958 1979 1.087501 GACCTTTCATCCGCTTGGTC 58.912 55.000 0.00 0.00 37.42 4.02
1959 1980 0.673644 CGACCTTTCATCCGCTTGGT 60.674 55.000 0.00 0.00 0.00 3.67
1960 1981 1.369091 CCGACCTTTCATCCGCTTGG 61.369 60.000 0.00 0.00 0.00 3.61
1961 1982 1.369091 CCCGACCTTTCATCCGCTTG 61.369 60.000 0.00 0.00 0.00 4.01
1962 1983 1.078426 CCCGACCTTTCATCCGCTT 60.078 57.895 0.00 0.00 0.00 4.68
1963 1984 1.961180 CTCCCGACCTTTCATCCGCT 61.961 60.000 0.00 0.00 0.00 5.52
1964 1985 1.521681 CTCCCGACCTTTCATCCGC 60.522 63.158 0.00 0.00 0.00 5.54
1965 1986 1.521681 GCTCCCGACCTTTCATCCG 60.522 63.158 0.00 0.00 0.00 4.18
1966 1987 1.521681 CGCTCCCGACCTTTCATCC 60.522 63.158 0.00 0.00 36.29 3.51
1967 1988 1.521681 CCGCTCCCGACCTTTCATC 60.522 63.158 0.00 0.00 36.29 2.92
1968 1989 2.584608 CCGCTCCCGACCTTTCAT 59.415 61.111 0.00 0.00 36.29 2.57
1969 1990 4.388499 GCCGCTCCCGACCTTTCA 62.388 66.667 0.00 0.00 36.29 2.69
1977 1998 4.899239 CTAGCTTGGCCGCTCCCG 62.899 72.222 8.56 0.00 41.30 5.14
1978 1999 3.470888 TCTAGCTTGGCCGCTCCC 61.471 66.667 8.56 0.00 41.30 4.30
1979 2000 2.202946 GTCTAGCTTGGCCGCTCC 60.203 66.667 8.56 0.00 41.30 4.70
1980 2001 2.583593 CGTCTAGCTTGGCCGCTC 60.584 66.667 8.56 0.00 41.30 5.03
1981 2002 4.148825 CCGTCTAGCTTGGCCGCT 62.149 66.667 10.20 10.20 43.83 5.52
1986 2007 2.887568 CGCTGCCGTCTAGCTTGG 60.888 66.667 0.00 0.00 39.00 3.61
1987 2008 1.875813 CTCGCTGCCGTCTAGCTTG 60.876 63.158 0.00 0.00 39.00 4.01
1988 2009 2.492090 CTCGCTGCCGTCTAGCTT 59.508 61.111 0.00 0.00 39.00 3.74
1989 2010 3.522731 CCTCGCTGCCGTCTAGCT 61.523 66.667 0.00 0.00 39.00 3.32
1991 2012 4.914420 CGCCTCGCTGCCGTCTAG 62.914 72.222 0.00 0.00 35.54 2.43
2049 2070 4.008933 GCCCCCTGATCCGATCCG 62.009 72.222 5.91 0.00 0.00 4.18
2050 2071 4.008933 CGCCCCCTGATCCGATCC 62.009 72.222 5.91 0.00 0.00 3.36
2051 2072 4.008933 CCGCCCCCTGATCCGATC 62.009 72.222 1.01 1.01 0.00 3.69
2081 2102 4.059459 CAGTCGTGCACGCGGAAC 62.059 66.667 33.63 25.16 39.60 3.62
2091 2112 2.091112 CGGCTCTTCTGCAGTCGTG 61.091 63.158 14.67 7.99 34.04 4.35
2092 2113 2.259818 CGGCTCTTCTGCAGTCGT 59.740 61.111 14.67 0.00 34.04 4.34
2093 2114 3.184683 GCGGCTCTTCTGCAGTCG 61.185 66.667 14.67 2.60 46.35 4.18
2098 2119 3.191539 CTTCGGCGGCTCTTCTGC 61.192 66.667 7.21 0.00 46.38 4.26
2099 2120 1.079819 TTCTTCGGCGGCTCTTCTG 60.080 57.895 7.21 0.00 0.00 3.02
2100 2121 1.216710 CTTCTTCGGCGGCTCTTCT 59.783 57.895 7.21 0.00 0.00 2.85
2101 2122 0.804156 CTCTTCTTCGGCGGCTCTTC 60.804 60.000 7.21 0.00 0.00 2.87
2102 2123 1.216710 CTCTTCTTCGGCGGCTCTT 59.783 57.895 7.21 0.00 0.00 2.85
2103 2124 2.888863 CTCTTCTTCGGCGGCTCT 59.111 61.111 7.21 0.00 0.00 4.09
2104 2125 2.888051 GCTCTTCTTCGGCGGCTC 60.888 66.667 7.21 0.00 0.00 4.70
2105 2126 3.695606 TGCTCTTCTTCGGCGGCT 61.696 61.111 7.21 0.00 0.00 5.52
2106 2127 3.491652 GTGCTCTTCTTCGGCGGC 61.492 66.667 7.21 0.00 0.00 6.53
2107 2128 3.181967 CGTGCTCTTCTTCGGCGG 61.182 66.667 7.21 0.00 0.00 6.13
2108 2129 1.078759 ATTCGTGCTCTTCTTCGGCG 61.079 55.000 0.00 0.00 0.00 6.46
2109 2130 0.371645 CATTCGTGCTCTTCTTCGGC 59.628 55.000 0.00 0.00 0.00 5.54
2110 2131 0.371645 GCATTCGTGCTCTTCTTCGG 59.628 55.000 0.00 0.00 0.00 4.30
2111 2132 1.070821 TGCATTCGTGCTCTTCTTCG 58.929 50.000 1.86 0.00 35.49 3.79
2112 2133 4.784710 GCTTATGCATTCGTGCTCTTCTTC 60.785 45.833 3.54 0.00 39.41 2.87
2113 2134 3.064545 GCTTATGCATTCGTGCTCTTCTT 59.935 43.478 3.54 0.00 39.41 2.52
2114 2135 2.611292 GCTTATGCATTCGTGCTCTTCT 59.389 45.455 3.54 0.00 39.41 2.85
2115 2136 2.611292 AGCTTATGCATTCGTGCTCTTC 59.389 45.455 3.54 0.00 42.74 2.87
2116 2137 2.353889 CAGCTTATGCATTCGTGCTCTT 59.646 45.455 3.54 0.00 42.74 2.85
2117 2138 1.938577 CAGCTTATGCATTCGTGCTCT 59.061 47.619 3.54 0.00 42.74 4.09
2118 2139 1.003116 CCAGCTTATGCATTCGTGCTC 60.003 52.381 3.54 0.00 42.74 4.26
2119 2140 1.019673 CCAGCTTATGCATTCGTGCT 58.980 50.000 3.54 7.05 42.74 4.40
2120 2141 1.003116 CTCCAGCTTATGCATTCGTGC 60.003 52.381 3.54 4.66 42.74 5.34
2121 2142 1.003116 GCTCCAGCTTATGCATTCGTG 60.003 52.381 3.54 0.00 42.74 4.35
2122 2143 1.303309 GCTCCAGCTTATGCATTCGT 58.697 50.000 3.54 0.00 42.74 3.85
2123 2144 0.590195 GGCTCCAGCTTATGCATTCG 59.410 55.000 3.54 0.00 42.74 3.34
2124 2145 0.590195 CGGCTCCAGCTTATGCATTC 59.410 55.000 3.54 0.00 42.74 2.67
2125 2146 0.107017 ACGGCTCCAGCTTATGCATT 60.107 50.000 3.54 0.00 42.74 3.56
2126 2147 0.107017 AACGGCTCCAGCTTATGCAT 60.107 50.000 3.79 3.79 42.74 3.96
2127 2148 1.026182 CAACGGCTCCAGCTTATGCA 61.026 55.000 3.16 0.00 42.74 3.96
2128 2149 0.744414 TCAACGGCTCCAGCTTATGC 60.744 55.000 0.00 0.00 41.70 3.14
2129 2150 1.009829 GTCAACGGCTCCAGCTTATG 58.990 55.000 0.00 0.00 41.70 1.90
2130 2151 0.107654 GGTCAACGGCTCCAGCTTAT 60.108 55.000 0.00 0.00 41.70 1.73
2131 2152 1.192146 AGGTCAACGGCTCCAGCTTA 61.192 55.000 0.00 0.00 41.70 3.09
2132 2153 2.032681 GGTCAACGGCTCCAGCTT 59.967 61.111 0.00 0.00 41.70 3.74
2133 2154 2.925170 AGGTCAACGGCTCCAGCT 60.925 61.111 0.00 0.00 41.70 4.24
2134 2155 2.435059 GAGGTCAACGGCTCCAGC 60.435 66.667 0.00 0.00 41.14 4.85
2135 2156 2.266055 GGAGGTCAACGGCTCCAG 59.734 66.667 0.00 0.00 36.11 3.86
2136 2157 3.319198 GGGAGGTCAACGGCTCCA 61.319 66.667 0.00 0.00 37.71 3.86
2137 2158 3.003763 AGGGAGGTCAACGGCTCC 61.004 66.667 0.00 0.00 35.38 4.70
2138 2159 1.827399 TTCAGGGAGGTCAACGGCTC 61.827 60.000 0.00 0.00 0.00 4.70
2139 2160 1.831652 CTTCAGGGAGGTCAACGGCT 61.832 60.000 0.00 0.00 0.00 5.52
2140 2161 1.376037 CTTCAGGGAGGTCAACGGC 60.376 63.158 0.00 0.00 0.00 5.68
2141 2162 1.376037 GCTTCAGGGAGGTCAACGG 60.376 63.158 0.00 0.00 0.00 4.44
2142 2163 0.671781 CTGCTTCAGGGAGGTCAACG 60.672 60.000 0.00 0.00 0.00 4.10
2143 2164 0.398318 ACTGCTTCAGGGAGGTCAAC 59.602 55.000 0.00 0.00 37.73 3.18
2144 2165 0.397941 CACTGCTTCAGGGAGGTCAA 59.602 55.000 0.00 0.00 36.97 3.18
2145 2166 2.061220 CACTGCTTCAGGGAGGTCA 58.939 57.895 0.00 0.00 36.97 4.02
2146 2167 1.376553 GCACTGCTTCAGGGAGGTC 60.377 63.158 0.00 0.00 36.97 3.85
2147 2168 1.495579 ATGCACTGCTTCAGGGAGGT 61.496 55.000 1.98 0.00 36.97 3.85
2148 2169 0.543277 TATGCACTGCTTCAGGGAGG 59.457 55.000 1.98 0.00 36.97 4.30
2149 2170 2.012673 GTTATGCACTGCTTCAGGGAG 58.987 52.381 1.98 0.00 36.97 4.30
2150 2171 1.340017 GGTTATGCACTGCTTCAGGGA 60.340 52.381 1.98 0.00 36.97 4.20
2151 2172 1.098050 GGTTATGCACTGCTTCAGGG 58.902 55.000 1.98 0.00 38.04 4.45
2152 2173 1.741706 CAGGTTATGCACTGCTTCAGG 59.258 52.381 1.98 0.00 35.51 3.86
2163 2184 6.928486 TGTACAGGTACGTGCAGGTTATGC 62.928 50.000 18.35 6.03 45.86 3.14
2164 2185 2.380084 ACAGGTACGTGCAGGTTATG 57.620 50.000 18.35 15.33 0.00 1.90
2165 2186 2.827322 TGTACAGGTACGTGCAGGTTAT 59.173 45.455 18.35 1.18 38.85 1.89
2166 2187 2.229543 CTGTACAGGTACGTGCAGGTTA 59.770 50.000 18.35 0.31 43.47 2.85
2167 2188 1.000506 CTGTACAGGTACGTGCAGGTT 59.999 52.381 18.35 1.37 43.47 3.50
2168 2189 0.601558 CTGTACAGGTACGTGCAGGT 59.398 55.000 17.24 17.24 43.47 4.00
2169 2190 3.418675 CTGTACAGGTACGTGCAGG 57.581 57.895 15.49 4.53 43.47 4.85
2170 2191 3.418675 CCTGTACAGGTACGTGCAG 57.581 57.895 30.57 14.06 45.83 4.41
2180 2201 1.802960 CAAGAAGCAGCACCTGTACAG 59.197 52.381 16.34 16.34 33.43 2.74
2181 2202 1.882912 CAAGAAGCAGCACCTGTACA 58.117 50.000 0.00 0.00 33.43 2.90
2182 2203 0.519077 GCAAGAAGCAGCACCTGTAC 59.481 55.000 0.00 0.00 44.79 2.90
2183 2204 2.932663 GCAAGAAGCAGCACCTGTA 58.067 52.632 0.00 0.00 44.79 2.74
2184 2205 3.755434 GCAAGAAGCAGCACCTGT 58.245 55.556 0.00 0.00 44.79 4.00
2193 2214 1.379576 ATGAGGGCTGGCAAGAAGC 60.380 57.895 2.88 0.00 44.65 3.86
2194 2215 1.664321 GCATGAGGGCTGGCAAGAAG 61.664 60.000 2.88 0.00 0.00 2.85
2195 2216 1.679977 GCATGAGGGCTGGCAAGAA 60.680 57.895 2.88 0.00 0.00 2.52
2196 2217 2.044650 GCATGAGGGCTGGCAAGA 60.045 61.111 2.88 0.00 0.00 3.02
2197 2218 3.515286 CGCATGAGGGCTGGCAAG 61.515 66.667 2.88 0.00 0.00 4.01
2198 2219 3.866379 AACGCATGAGGGCTGGCAA 62.866 57.895 2.88 0.00 0.00 4.52
2199 2220 4.349503 AACGCATGAGGGCTGGCA 62.350 61.111 2.88 0.00 0.00 4.92
2200 2221 3.818787 CAACGCATGAGGGCTGGC 61.819 66.667 0.00 0.00 0.00 4.85
2201 2222 2.360350 ACAACGCATGAGGGCTGG 60.360 61.111 0.00 0.00 0.00 4.85
2202 2223 2.693762 CCACAACGCATGAGGGCTG 61.694 63.158 0.00 0.00 36.24 4.85
2203 2224 2.360350 CCACAACGCATGAGGGCT 60.360 61.111 0.00 0.00 36.24 5.19
2204 2225 2.359850 TCCACAACGCATGAGGGC 60.360 61.111 0.00 0.00 39.97 5.19
2205 2226 2.390599 CGTCCACAACGCATGAGGG 61.391 63.158 0.00 0.00 45.76 4.30
2206 2227 3.168271 CGTCCACAACGCATGAGG 58.832 61.111 0.00 0.00 45.76 3.86
2214 2235 2.629763 GCCAACGTCGTCCACAAC 59.370 61.111 0.00 0.00 0.00 3.32
2215 2236 2.962786 CGCCAACGTCGTCCACAA 60.963 61.111 0.00 0.00 33.53 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.