Multiple sequence alignment - TraesCS6B01G379100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G379100 chr6B 100.000 4685 0 0 1 4685 653854335 653849651 0.000000e+00 8652.0
1 TraesCS6B01G379100 chr6B 95.112 3335 132 12 683 4013 653186127 653182820 0.000000e+00 5227.0
2 TraesCS6B01G379100 chr6B 86.131 1406 154 22 2618 4008 653109046 653107667 0.000000e+00 1478.0
3 TraesCS6B01G379100 chr6B 87.395 1309 128 18 2618 3896 653772682 653771381 0.000000e+00 1469.0
4 TraesCS6B01G379100 chr6B 89.262 922 75 10 3175 4085 653710822 653709914 0.000000e+00 1133.0
5 TraesCS6B01G379100 chr6B 88.640 625 62 4 3176 3793 653220191 653220813 0.000000e+00 752.0
6 TraesCS6B01G379100 chr6B 78.971 1127 180 33 1419 2518 653110308 653109212 0.000000e+00 715.0
7 TraesCS6B01G379100 chr6B 79.068 1094 166 35 1420 2501 653712582 653711540 0.000000e+00 693.0
8 TraesCS6B01G379100 chr6B 78.222 1125 180 42 1416 2502 653230356 653229259 0.000000e+00 660.0
9 TraesCS6B01G379100 chr6B 79.035 1016 143 32 1420 2424 653784242 653783286 2.380000e-177 632.0
10 TraesCS6B01G379100 chr6B 91.810 464 18 8 1 455 653186573 653186121 3.080000e-176 628.0
11 TraesCS6B01G379100 chr6B 84.268 553 60 14 2617 3165 653217915 653218444 8.990000e-142 514.0
12 TraesCS6B01G379100 chr6B 79.637 771 103 20 1681 2445 653763328 653762606 5.410000e-139 505.0
13 TraesCS6B01G379100 chr6B 83.183 553 55 15 2618 3169 653711373 653710858 5.490000e-129 472.0
14 TraesCS6B01G379100 chr6B 91.857 307 21 4 4383 4685 653759874 653759568 4.330000e-115 425.0
15 TraesCS6B01G379100 chr6B 90.554 307 25 4 4383 4685 653767125 653766819 2.030000e-108 403.0
16 TraesCS6B01G379100 chr6B 89.928 278 25 3 4386 4661 653182631 653182355 5.770000e-94 355.0
17 TraesCS6B01G379100 chr6B 90.262 267 18 5 4385 4644 653709893 653709628 4.490000e-90 342.0
18 TraesCS6B01G379100 chr6B 85.159 283 39 1 2219 2501 653216192 653216471 2.130000e-73 287.0
19 TraesCS6B01G379100 chr6B 83.388 307 33 9 1878 2181 653214432 653214723 7.730000e-68 268.0
20 TraesCS6B01G379100 chr6B 88.546 227 14 5 3891 4116 653767336 653767121 1.000000e-66 265.0
21 TraesCS6B01G379100 chr6B 85.600 125 15 3 744 868 653181713 653181592 1.370000e-25 128.0
22 TraesCS6B01G379100 chr6B 80.769 156 18 7 215 359 653231382 653231228 1.380000e-20 111.0
23 TraesCS6B01G379100 chr6B 89.773 88 3 4 363 450 653231188 653231107 1.780000e-19 108.0
24 TraesCS6B01G379100 chr6B 85.870 92 3 2 4025 4116 653759951 653759870 6.460000e-14 89.8
25 TraesCS6B01G379100 chr6A 88.038 1697 175 13 1488 3169 579112758 579111075 0.000000e+00 1984.0
26 TraesCS6B01G379100 chr6A 85.619 904 104 12 1983 2874 579025198 579024309 0.000000e+00 926.0
27 TraesCS6B01G379100 chr6A 82.628 1111 130 34 2897 3970 579024316 579023232 0.000000e+00 924.0
28 TraesCS6B01G379100 chr6A 86.141 736 94 6 1255 1987 579034591 579033861 0.000000e+00 787.0
29 TraesCS6B01G379100 chr6A 86.577 596 76 3 3186 3778 579111019 579110425 0.000000e+00 654.0
30 TraesCS6B01G379100 chr6A 91.232 422 24 7 685 1101 579122572 579122159 3.170000e-156 562.0
31 TraesCS6B01G379100 chr6A 86.158 354 22 14 3771 4116 579102223 579101889 1.600000e-94 357.0
32 TraesCS6B01G379100 chr6A 80.249 481 76 12 2040 2519 579767818 579768280 1.250000e-90 344.0
33 TraesCS6B01G379100 chr6A 90.254 236 15 3 224 457 579122795 579122566 7.620000e-78 302.0
34 TraesCS6B01G379100 chr6A 86.916 214 26 2 466 679 107272812 107272601 6.060000e-59 239.0
35 TraesCS6B01G379100 chr6A 86.111 216 19 3 685 890 579034899 579034685 6.100000e-54 222.0
36 TraesCS6B01G379100 chr6A 91.837 98 8 0 4557 4654 48906493 48906590 2.270000e-28 137.0
37 TraesCS6B01G379100 chr6A 76.834 259 40 12 112 359 579050494 579050245 1.370000e-25 128.0
38 TraesCS6B01G379100 chr6A 85.915 71 6 1 4383 4449 579101893 579101823 6.500000e-09 73.1
39 TraesCS6B01G379100 chr6D 88.644 1409 128 13 2618 4008 432909310 432907916 0.000000e+00 1687.0
40 TraesCS6B01G379100 chr6D 83.406 1380 178 28 2631 3970 432965637 432964269 0.000000e+00 1232.0
41 TraesCS6B01G379100 chr6D 79.404 1073 159 35 1434 2501 432910458 432909443 0.000000e+00 701.0
42 TraesCS6B01G379100 chr6D 79.496 556 87 18 2617 3169 433582994 433583525 2.060000e-98 370.0
43 TraesCS6B01G379100 chr1D 94.624 279 9 4 4112 4386 323930116 323930392 1.200000e-115 427.0
44 TraesCS6B01G379100 chr1D 94.444 270 11 2 4117 4383 419022380 419022112 3.370000e-111 412.0
45 TraesCS6B01G379100 chr3A 94.565 276 11 2 4116 4388 382103220 382103494 1.560000e-114 424.0
46 TraesCS6B01G379100 chr3A 84.332 217 30 3 468 684 743683082 743682870 4.750000e-50 209.0
47 TraesCS6B01G379100 chr1B 94.815 270 10 2 4116 4382 66377925 66377657 7.250000e-113 418.0
48 TraesCS6B01G379100 chr1B 94.815 270 11 1 4117 4383 145452050 145451781 7.250000e-113 418.0
49 TraesCS6B01G379100 chr1B 90.367 218 20 1 466 683 189326068 189326284 7.670000e-73 285.0
50 TraesCS6B01G379100 chr7D 94.796 269 10 2 4117 4382 452445690 452445957 2.610000e-112 416.0
51 TraesCS6B01G379100 chr7D 100.000 29 0 0 4657 4685 176158466 176158494 2.000000e-03 54.7
52 TraesCS6B01G379100 chr4A 94.796 269 11 1 4117 4382 161132286 161132554 2.610000e-112 416.0
53 TraesCS6B01G379100 chr4A 83.645 214 34 1 466 679 13590686 13590474 2.860000e-47 200.0
54 TraesCS6B01G379100 chr7B 94.444 270 12 1 4116 4382 713117955 713117686 3.370000e-111 412.0
55 TraesCS6B01G379100 chrUn 93.525 278 14 2 4113 4387 253448929 253448653 1.210000e-110 411.0
56 TraesCS6B01G379100 chr2B 89.041 292 19 8 4098 4383 227685707 227685991 2.680000e-92 350.0
57 TraesCS6B01G379100 chr3D 91.364 220 17 2 466 683 32336862 32336643 2.740000e-77 300.0
58 TraesCS6B01G379100 chr3D 91.398 186 14 2 500 684 11346610 11346426 2.160000e-63 254.0
59 TraesCS6B01G379100 chr1A 89.855 207 20 1 467 673 77757883 77758088 1.000000e-66 265.0
60 TraesCS6B01G379100 chr5A 88.182 220 24 2 466 685 658360694 658360911 1.290000e-65 261.0
61 TraesCS6B01G379100 chr5A 83.645 214 33 2 466 679 569155276 569155487 2.860000e-47 200.0
62 TraesCS6B01G379100 chr5A 100.000 28 0 0 4658 4685 697712277 697712304 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G379100 chr6B 653849651 653854335 4684 True 8652.00 8652 100.000000 1 4685 1 chr6B.!!$R3 4684
1 TraesCS6B01G379100 chr6B 653181592 653186573 4981 True 1584.50 5227 90.612500 1 4661 4 chr6B.!!$R5 4660
2 TraesCS6B01G379100 chr6B 653771381 653772682 1301 True 1469.00 1469 87.395000 2618 3896 1 chr6B.!!$R1 1278
3 TraesCS6B01G379100 chr6B 653107667 653110308 2641 True 1096.50 1478 82.551000 1419 4008 2 chr6B.!!$R4 2589
4 TraesCS6B01G379100 chr6B 653709628 653712582 2954 True 660.00 1133 85.443750 1420 4644 4 chr6B.!!$R7 3224
5 TraesCS6B01G379100 chr6B 653783286 653784242 956 True 632.00 632 79.035000 1420 2424 1 chr6B.!!$R2 1004
6 TraesCS6B01G379100 chr6B 653214432 653220813 6381 False 455.25 752 85.363750 1878 3793 4 chr6B.!!$F1 1915
7 TraesCS6B01G379100 chr6B 653759568 653767336 7768 True 337.56 505 87.292800 1681 4685 5 chr6B.!!$R8 3004
8 TraesCS6B01G379100 chr6B 653229259 653231382 2123 True 293.00 660 82.921333 215 2502 3 chr6B.!!$R6 2287
9 TraesCS6B01G379100 chr6A 579110425 579112758 2333 True 1319.00 1984 87.307500 1488 3778 2 chr6A.!!$R6 2290
10 TraesCS6B01G379100 chr6A 579023232 579025198 1966 True 925.00 926 84.123500 1983 3970 2 chr6A.!!$R3 1987
11 TraesCS6B01G379100 chr6A 579033861 579034899 1038 True 504.50 787 86.126000 685 1987 2 chr6A.!!$R4 1302
12 TraesCS6B01G379100 chr6A 579122159 579122795 636 True 432.00 562 90.743000 224 1101 2 chr6A.!!$R7 877
13 TraesCS6B01G379100 chr6D 432964269 432965637 1368 True 1232.00 1232 83.406000 2631 3970 1 chr6D.!!$R1 1339
14 TraesCS6B01G379100 chr6D 432907916 432910458 2542 True 1194.00 1687 84.024000 1434 4008 2 chr6D.!!$R2 2574
15 TraesCS6B01G379100 chr6D 433582994 433583525 531 False 370.00 370 79.496000 2617 3169 1 chr6D.!!$F1 552

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
175 176 0.257328 TGTGGTGTGGTGGATGTGTT 59.743 50.0 0.00 0.00 0.00 3.32 F
1390 1499 0.319728 TTCTGAGGAGTGCACTGAGC 59.680 55.0 27.27 10.08 45.96 4.26 F
3369 12141 0.318441 CACCAGTGTCGTCCATGACT 59.682 55.0 0.00 0.00 39.64 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1590 1735 1.001641 ATCCACTGAGCCACTTGCC 60.002 57.895 0.00 0.00 42.71 4.52 R
3386 12158 2.561569 CCAACAACTCGACCAACTTCT 58.438 47.619 0.00 0.00 0.00 2.85 R
4355 13263 0.030369 GTGCATGCTCTAGCCAATGC 59.970 55.000 20.33 16.33 45.25 3.56 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 1.725557 CGCCGAAGCTCTGTAGGCTA 61.726 60.000 13.40 0.00 45.16 3.93
173 174 0.883153 CATGTGGTGTGGTGGATGTG 59.117 55.000 0.00 0.00 0.00 3.21
175 176 0.257328 TGTGGTGTGGTGGATGTGTT 59.743 50.000 0.00 0.00 0.00 3.32
177 178 0.548510 TGGTGTGGTGGATGTGTTCA 59.451 50.000 0.00 0.00 0.00 3.18
278 286 0.870393 CATCGCCTTTGCATATCGCT 59.130 50.000 0.00 0.00 43.06 4.93
302 310 3.067106 GGTGTCTCAACGTGATCATTGT 58.933 45.455 0.00 0.00 0.00 2.71
340 354 1.983481 GGCCATGGCAATCCACACA 60.983 57.895 36.56 0.00 46.92 3.72
344 364 0.960286 CATGGCAATCCACACACACA 59.040 50.000 0.00 0.00 46.92 3.72
345 365 0.961019 ATGGCAATCCACACACACAC 59.039 50.000 0.00 0.00 46.92 3.82
354 374 0.859232 CACACACACACGTAGCCTTC 59.141 55.000 0.00 0.00 0.00 3.46
355 375 0.596600 ACACACACACGTAGCCTTCG 60.597 55.000 0.00 0.00 0.00 3.79
356 376 1.006571 ACACACACGTAGCCTTCGG 60.007 57.895 0.00 0.00 0.00 4.30
357 377 1.287815 CACACACGTAGCCTTCGGA 59.712 57.895 0.00 0.00 0.00 4.55
376 436 2.557056 GGACGGACATCTTCCATCGATA 59.443 50.000 0.00 0.00 46.29 2.92
452 512 5.104776 TGGTCCATGAATATATAGCTGGCTC 60.105 44.000 0.00 0.00 0.00 4.70
454 514 3.806521 CCATGAATATATAGCTGGCTCGC 59.193 47.826 0.00 0.00 0.00 5.03
455 515 4.442612 CCATGAATATATAGCTGGCTCGCT 60.443 45.833 0.00 7.04 43.83 4.93
456 516 4.377839 TGAATATATAGCTGGCTCGCTC 57.622 45.455 0.00 0.00 41.30 5.03
457 517 3.131223 TGAATATATAGCTGGCTCGCTCC 59.869 47.826 0.00 0.00 41.30 4.70
458 518 1.095600 TATATAGCTGGCTCGCTCCG 58.904 55.000 0.00 0.00 41.30 4.63
459 519 1.599606 ATATAGCTGGCTCGCTCCGG 61.600 60.000 0.00 0.00 41.30 5.14
469 529 3.854669 CGCTCCGGGGCTCTGATT 61.855 66.667 26.87 0.00 0.00 2.57
470 530 2.592308 GCTCCGGGGCTCTGATTT 59.408 61.111 22.28 0.00 0.00 2.17
471 531 1.077429 GCTCCGGGGCTCTGATTTT 60.077 57.895 22.28 0.00 0.00 1.82
474 534 1.819632 CCGGGGCTCTGATTTTCGG 60.820 63.158 0.00 0.00 0.00 4.30
475 535 2.472909 CGGGGCTCTGATTTTCGGC 61.473 63.158 0.00 0.00 0.00 5.54
476 536 2.121538 GGGGCTCTGATTTTCGGCC 61.122 63.158 0.00 0.00 41.80 6.13
477 537 2.472909 GGGCTCTGATTTTCGGCCG 61.473 63.158 22.12 22.12 43.27 6.13
478 538 1.449601 GGCTCTGATTTTCGGCCGA 60.450 57.895 27.28 27.28 33.30 5.54
479 539 1.024579 GGCTCTGATTTTCGGCCGAA 61.025 55.000 35.81 35.81 33.30 4.30
501 561 5.447624 AAAAAGTGGATTTCGGTCGAATT 57.552 34.783 6.63 3.60 33.79 2.17
502 562 5.447624 AAAAGTGGATTTCGGTCGAATTT 57.552 34.783 6.63 1.23 33.79 1.82
504 564 2.671396 AGTGGATTTCGGTCGAATTTCG 59.329 45.455 12.54 12.54 42.10 3.46
505 565 2.004017 TGGATTTCGGTCGAATTTCGG 58.996 47.619 18.02 3.35 40.88 4.30
506 566 1.267882 GGATTTCGGTCGAATTTCGGC 60.268 52.381 18.02 16.46 44.91 5.54
513 573 0.577269 GTCGAATTTCGGCCATCTCG 59.423 55.000 18.02 3.32 38.79 4.04
531 591 4.657952 GCCTGGGGCGAAAAGTAT 57.342 55.556 0.00 0.00 39.62 2.12
532 592 3.792712 GCCTGGGGCGAAAAGTATA 57.207 52.632 0.00 0.00 39.62 1.47
533 593 2.271944 GCCTGGGGCGAAAAGTATAT 57.728 50.000 0.00 0.00 39.62 0.86
534 594 2.583143 GCCTGGGGCGAAAAGTATATT 58.417 47.619 0.00 0.00 39.62 1.28
535 595 2.956333 GCCTGGGGCGAAAAGTATATTT 59.044 45.455 0.00 0.00 39.62 1.40
536 596 4.139038 GCCTGGGGCGAAAAGTATATTTA 58.861 43.478 0.00 0.00 39.62 1.40
537 597 4.215613 GCCTGGGGCGAAAAGTATATTTAG 59.784 45.833 0.00 0.00 39.62 1.85
538 598 4.760204 CCTGGGGCGAAAAGTATATTTAGG 59.240 45.833 0.00 0.00 0.00 2.69
539 599 4.139038 TGGGGCGAAAAGTATATTTAGGC 58.861 43.478 0.00 0.00 38.92 3.93
541 601 3.187842 GGGCGAAAAGTATATTTAGGCCG 59.812 47.826 9.07 0.00 45.54 6.13
542 602 4.060205 GGCGAAAAGTATATTTAGGCCGA 58.940 43.478 0.00 0.00 35.44 5.54
543 603 4.512571 GGCGAAAAGTATATTTAGGCCGAA 59.487 41.667 0.00 0.00 35.44 4.30
544 604 5.007921 GGCGAAAAGTATATTTAGGCCGAAA 59.992 40.000 13.75 13.75 35.44 3.46
547 607 7.112984 GCGAAAAGTATATTTAGGCCGAAATTG 59.887 37.037 26.06 7.91 31.51 2.32
548 608 7.112984 CGAAAAGTATATTTAGGCCGAAATTGC 59.887 37.037 26.06 17.09 31.51 3.56
551 611 6.296026 AGTATATTTAGGCCGAAATTGCTCA 58.704 36.000 26.06 10.61 31.51 4.26
552 612 6.770785 AGTATATTTAGGCCGAAATTGCTCAA 59.229 34.615 26.06 9.94 31.51 3.02
553 613 4.799564 ATTTAGGCCGAAATTGCTCAAA 57.200 36.364 17.19 0.00 0.00 2.69
554 614 4.799564 TTTAGGCCGAAATTGCTCAAAT 57.200 36.364 6.97 0.00 0.00 2.32
555 615 4.799564 TTAGGCCGAAATTGCTCAAATT 57.200 36.364 0.00 0.00 40.32 1.82
557 617 3.328505 AGGCCGAAATTGCTCAAATTTG 58.671 40.909 12.15 12.15 46.29 2.32
558 618 2.416202 GGCCGAAATTGCTCAAATTTGG 59.584 45.455 17.90 10.84 46.29 3.28
559 619 2.159667 GCCGAAATTGCTCAAATTTGGC 60.160 45.455 19.99 19.99 46.29 4.52
562 622 4.024218 CCGAAATTGCTCAAATTTGGCAAA 60.024 37.500 32.00 16.01 46.29 3.68
563 623 5.505324 CCGAAATTGCTCAAATTTGGCAAAA 60.505 36.000 32.00 20.79 46.29 2.44
564 624 6.144175 CGAAATTGCTCAAATTTGGCAAAAT 58.856 32.000 32.00 26.40 46.29 1.82
565 625 6.637658 CGAAATTGCTCAAATTTGGCAAAATT 59.362 30.769 32.00 28.90 46.29 1.82
614 674 9.326413 TGGTTAAATTTTAGCCGAAATTTTTGA 57.674 25.926 19.34 8.69 43.17 2.69
620 680 9.676195 AATTTTAGCCGAAATTTTTGAAAATGG 57.324 25.926 2.71 2.11 38.53 3.16
621 681 4.747540 AGCCGAAATTTTTGAAAATGGC 57.252 36.364 15.69 15.69 41.56 4.40
622 682 4.133078 AGCCGAAATTTTTGAAAATGGCA 58.867 34.783 21.30 0.00 42.68 4.92
624 684 4.213059 GCCGAAATTTTTGAAAATGGCAGA 59.787 37.500 17.37 0.00 41.21 4.26
625 685 5.277731 GCCGAAATTTTTGAAAATGGCAGAA 60.278 36.000 17.37 0.00 41.21 3.02
626 686 6.723282 CCGAAATTTTTGAAAATGGCAGAAA 58.277 32.000 2.71 0.00 38.53 2.52
627 687 7.361894 CCGAAATTTTTGAAAATGGCAGAAAT 58.638 30.769 2.71 0.00 38.53 2.17
628 688 7.861872 CCGAAATTTTTGAAAATGGCAGAAATT 59.138 29.630 2.71 0.00 39.94 1.82
630 690 8.785468 AAATTTTTGAAAATGGCAGAAATTCG 57.215 26.923 2.71 0.00 38.38 3.34
631 691 7.727331 ATTTTTGAAAATGGCAGAAATTCGA 57.273 28.000 1.14 0.00 37.24 3.71
632 692 6.523676 TTTTGAAAATGGCAGAAATTCGAC 57.476 33.333 0.00 0.00 0.00 4.20
633 693 4.173036 TGAAAATGGCAGAAATTCGACC 57.827 40.909 0.00 1.15 0.00 4.79
634 694 3.571828 TGAAAATGGCAGAAATTCGACCA 59.428 39.130 11.40 11.40 32.29 4.02
636 696 4.376340 AAATGGCAGAAATTCGACCATC 57.624 40.909 18.52 0.00 36.41 3.51
637 697 2.787473 TGGCAGAAATTCGACCATCT 57.213 45.000 6.02 0.00 0.00 2.90
640 700 1.594862 GCAGAAATTCGACCATCTCGG 59.405 52.381 0.00 0.00 43.16 4.63
642 702 0.938008 GAAATTCGACCATCTCGGCC 59.062 55.000 0.00 0.00 43.16 6.13
643 703 0.541863 AAATTCGACCATCTCGGCCT 59.458 50.000 0.00 0.00 43.16 5.19
644 704 1.410004 AATTCGACCATCTCGGCCTA 58.590 50.000 0.00 0.00 43.16 3.93
647 707 2.565645 CGACCATCTCGGCCTAGGG 61.566 68.421 11.72 1.17 38.87 3.53
678 738 8.741101 AAAAAGCTCAAACCAAAAATCAAAAC 57.259 26.923 0.00 0.00 0.00 2.43
679 739 7.446001 AAAGCTCAAACCAAAAATCAAAACA 57.554 28.000 0.00 0.00 0.00 2.83
681 741 5.936956 AGCTCAAACCAAAAATCAAAACACA 59.063 32.000 0.00 0.00 0.00 3.72
682 742 6.092533 AGCTCAAACCAAAAATCAAAACACAG 59.907 34.615 0.00 0.00 0.00 3.66
683 743 6.675244 GCTCAAACCAAAAATCAAAACACAGG 60.675 38.462 0.00 0.00 0.00 4.00
1044 1121 0.539438 ATCAAACAAGGCCAAGCGGA 60.539 50.000 5.01 0.00 0.00 5.54
1123 1204 1.269723 TCCTGTGCTGACTTCACTACG 59.730 52.381 0.00 0.00 35.58 3.51
1390 1499 0.319728 TTCTGAGGAGTGCACTGAGC 59.680 55.000 27.27 10.08 45.96 4.26
1590 1735 4.395656 CCGTCATATCTTACGTCATCTCG 58.604 47.826 0.00 0.00 37.40 4.04
1832 4174 1.004044 CCTAGCTATCCCCAGCATTGG 59.996 57.143 0.00 0.00 44.35 3.16
1849 4194 1.890876 TGGTGGTGGACGATCTTTTG 58.109 50.000 0.00 0.00 0.00 2.44
1959 4307 0.673644 AATCCTTTGCACTCGGACGG 60.674 55.000 0.27 0.00 0.00 4.79
2169 4535 1.686052 GGCAACTTGGTGACCATTGAA 59.314 47.619 19.25 0.00 31.53 2.69
2189 4555 1.680338 AGAGTTTGGCAGTTGGACAC 58.320 50.000 0.00 0.00 30.61 3.67
2328 6146 4.256920 AGACCATCAAATTCGTCAGAAGG 58.743 43.478 0.00 0.00 40.09 3.46
2649 7945 3.019564 GCATTTTGATCTAGTGCCAGGT 58.980 45.455 0.00 0.00 0.00 4.00
3206 11969 6.147492 CCTTCTTCTGTTTCTGACATGAAGAG 59.853 42.308 0.00 0.00 44.18 2.85
3333 12096 2.439156 GATGCCAAGCGAGCCCTT 60.439 61.111 0.00 0.00 0.00 3.95
3369 12141 0.318441 CACCAGTGTCGTCCATGACT 59.682 55.000 0.00 0.00 39.64 3.41
3386 12158 2.992689 TCCGGAAGCAGCGTACCA 60.993 61.111 0.00 0.00 0.00 3.25
3491 12263 1.907739 CTGGAGGCGAGGAAATGGA 59.092 57.895 0.00 0.00 0.00 3.41
3552 12324 2.579201 CTGGCTCCGTCGGACAAT 59.421 61.111 10.71 0.00 0.00 2.71
3616 12394 3.393970 CGCTCCTCTGGGCCTTGA 61.394 66.667 4.53 2.03 0.00 3.02
3674 12452 1.677966 CTGCAAGTGCTCCAGCCAT 60.678 57.895 4.69 0.00 42.66 4.40
3755 12538 5.126384 TGGATTTCAGTTCCTTTCGTTGTTT 59.874 36.000 0.00 0.00 34.17 2.83
3767 12553 4.609691 TTCGTTGTTTCTCTTGGTTGTC 57.390 40.909 0.00 0.00 0.00 3.18
3836 12638 5.420739 CCTTGTAGCTGGCCCTTTTTATTTA 59.579 40.000 0.00 0.00 0.00 1.40
3837 12639 6.098266 CCTTGTAGCTGGCCCTTTTTATTTAT 59.902 38.462 0.00 0.00 0.00 1.40
3842 12644 9.878667 GTAGCTGGCCCTTTTTATTTATTTTTA 57.121 29.630 0.00 0.00 0.00 1.52
3903 12709 3.768757 GGAGAGATGAGACATGGGGATAG 59.231 52.174 0.00 0.00 0.00 2.08
3946 12754 1.537202 GATTGTGGCTTTTCGAGTGCT 59.463 47.619 6.39 0.00 0.00 4.40
3984 12795 5.782893 TTGTGGTGCTATTTTACTGCTTT 57.217 34.783 0.00 0.00 0.00 3.51
4001 12812 3.960102 TGCTTTTGGGAATGTGACTTCTT 59.040 39.130 0.00 0.00 0.00 2.52
4020 12928 8.146479 ACTTCTTAACCTTTACTAAACCGTTG 57.854 34.615 0.00 0.00 0.00 4.10
4021 12929 7.770433 ACTTCTTAACCTTTACTAAACCGTTGT 59.230 33.333 0.00 0.00 0.00 3.32
4042 12950 2.827322 TGTAGTTATGTGTAGCCCGTGT 59.173 45.455 0.00 0.00 0.00 4.49
4085 12993 2.537560 CCTTGCATCGCCGTCCATC 61.538 63.158 0.00 0.00 0.00 3.51
4086 12994 2.874694 CTTGCATCGCCGTCCATCG 61.875 63.158 0.00 0.00 39.52 3.84
4136 13044 5.313623 GTCTGTTGACGTATAATGTGTTGC 58.686 41.667 0.00 0.00 33.15 4.17
4137 13045 4.390603 TCTGTTGACGTATAATGTGTTGCC 59.609 41.667 0.00 0.00 0.00 4.52
4138 13046 4.320023 TGTTGACGTATAATGTGTTGCCT 58.680 39.130 0.00 0.00 0.00 4.75
4139 13047 5.480205 TGTTGACGTATAATGTGTTGCCTA 58.520 37.500 0.00 0.00 0.00 3.93
4140 13048 5.579119 TGTTGACGTATAATGTGTTGCCTAG 59.421 40.000 0.00 0.00 0.00 3.02
4141 13049 5.333299 TGACGTATAATGTGTTGCCTAGT 57.667 39.130 0.00 0.00 0.00 2.57
4142 13050 5.345702 TGACGTATAATGTGTTGCCTAGTC 58.654 41.667 0.00 0.00 0.00 2.59
4143 13051 5.126545 TGACGTATAATGTGTTGCCTAGTCT 59.873 40.000 0.00 0.00 0.00 3.24
4144 13052 5.589192 ACGTATAATGTGTTGCCTAGTCTC 58.411 41.667 0.00 0.00 0.00 3.36
4145 13053 5.360144 ACGTATAATGTGTTGCCTAGTCTCT 59.640 40.000 0.00 0.00 0.00 3.10
4146 13054 6.127423 ACGTATAATGTGTTGCCTAGTCTCTT 60.127 38.462 0.00 0.00 0.00 2.85
4147 13055 6.757010 CGTATAATGTGTTGCCTAGTCTCTTT 59.243 38.462 0.00 0.00 0.00 2.52
4148 13056 7.043325 CGTATAATGTGTTGCCTAGTCTCTTTC 60.043 40.741 0.00 0.00 0.00 2.62
4149 13057 4.623932 ATGTGTTGCCTAGTCTCTTTCA 57.376 40.909 0.00 0.00 0.00 2.69
4150 13058 4.623932 TGTGTTGCCTAGTCTCTTTCAT 57.376 40.909 0.00 0.00 0.00 2.57
4151 13059 4.973168 TGTGTTGCCTAGTCTCTTTCATT 58.027 39.130 0.00 0.00 0.00 2.57
4152 13060 6.109156 TGTGTTGCCTAGTCTCTTTCATTA 57.891 37.500 0.00 0.00 0.00 1.90
4153 13061 6.166279 TGTGTTGCCTAGTCTCTTTCATTAG 58.834 40.000 0.00 0.00 0.00 1.73
4154 13062 6.014584 TGTGTTGCCTAGTCTCTTTCATTAGA 60.015 38.462 0.00 0.00 0.00 2.10
4155 13063 7.044798 GTGTTGCCTAGTCTCTTTCATTAGAT 58.955 38.462 0.00 0.00 0.00 1.98
4156 13064 7.223777 GTGTTGCCTAGTCTCTTTCATTAGATC 59.776 40.741 0.00 0.00 0.00 2.75
4157 13065 6.078202 TGCCTAGTCTCTTTCATTAGATCG 57.922 41.667 0.00 0.00 0.00 3.69
4158 13066 5.010112 TGCCTAGTCTCTTTCATTAGATCGG 59.990 44.000 0.00 0.00 0.00 4.18
4159 13067 5.010213 GCCTAGTCTCTTTCATTAGATCGGT 59.990 44.000 0.00 0.00 0.00 4.69
4160 13068 6.674066 CCTAGTCTCTTTCATTAGATCGGTC 58.326 44.000 0.00 0.00 0.00 4.79
4161 13069 6.488683 CCTAGTCTCTTTCATTAGATCGGTCT 59.511 42.308 2.49 2.49 38.52 3.85
4162 13070 6.783708 AGTCTCTTTCATTAGATCGGTCTT 57.216 37.500 2.08 0.00 35.87 3.01
4163 13071 7.176589 AGTCTCTTTCATTAGATCGGTCTTT 57.823 36.000 2.08 0.00 35.87 2.52
4164 13072 7.616313 AGTCTCTTTCATTAGATCGGTCTTTT 58.384 34.615 2.08 0.00 35.87 2.27
4165 13073 7.547370 AGTCTCTTTCATTAGATCGGTCTTTTG 59.453 37.037 2.08 2.07 35.87 2.44
4166 13074 6.818644 TCTCTTTCATTAGATCGGTCTTTTGG 59.181 38.462 2.08 0.00 35.87 3.28
4167 13075 6.472887 TCTTTCATTAGATCGGTCTTTTGGT 58.527 36.000 2.08 0.00 35.87 3.67
4168 13076 6.940298 TCTTTCATTAGATCGGTCTTTTGGTT 59.060 34.615 2.08 0.00 35.87 3.67
4169 13077 6.494893 TTCATTAGATCGGTCTTTTGGTTG 57.505 37.500 2.08 0.00 35.87 3.77
4170 13078 4.394920 TCATTAGATCGGTCTTTTGGTTGC 59.605 41.667 2.08 0.00 35.87 4.17
4171 13079 2.270352 AGATCGGTCTTTTGGTTGCA 57.730 45.000 0.00 0.00 0.00 4.08
4172 13080 2.795329 AGATCGGTCTTTTGGTTGCAT 58.205 42.857 0.00 0.00 0.00 3.96
4173 13081 3.157087 AGATCGGTCTTTTGGTTGCATT 58.843 40.909 0.00 0.00 0.00 3.56
4174 13082 2.791383 TCGGTCTTTTGGTTGCATTG 57.209 45.000 0.00 0.00 0.00 2.82
4175 13083 1.339610 TCGGTCTTTTGGTTGCATTGG 59.660 47.619 0.00 0.00 0.00 3.16
4176 13084 1.511850 GGTCTTTTGGTTGCATTGGC 58.488 50.000 0.00 0.00 41.68 4.52
4177 13085 1.070601 GGTCTTTTGGTTGCATTGGCT 59.929 47.619 0.00 0.00 41.91 4.75
4178 13086 2.298729 GGTCTTTTGGTTGCATTGGCTA 59.701 45.455 0.00 0.00 41.91 3.93
4179 13087 3.578688 GTCTTTTGGTTGCATTGGCTAG 58.421 45.455 0.00 0.00 41.91 3.42
4180 13088 3.255642 GTCTTTTGGTTGCATTGGCTAGA 59.744 43.478 0.00 0.00 41.91 2.43
4181 13089 3.507233 TCTTTTGGTTGCATTGGCTAGAG 59.493 43.478 0.00 0.00 41.91 2.43
4182 13090 1.176527 TTGGTTGCATTGGCTAGAGC 58.823 50.000 0.00 0.00 41.91 4.09
4183 13091 0.038021 TGGTTGCATTGGCTAGAGCA 59.962 50.000 3.54 0.00 44.36 4.26
4184 13092 1.341285 TGGTTGCATTGGCTAGAGCAT 60.341 47.619 3.54 0.00 44.36 3.79
4185 13093 1.066605 GGTTGCATTGGCTAGAGCATG 59.933 52.381 3.54 0.90 44.36 4.06
4186 13094 0.742505 TTGCATTGGCTAGAGCATGC 59.257 50.000 10.51 10.51 45.25 4.06
4187 13095 2.411535 GCATTGGCTAGAGCATGCA 58.588 52.632 21.98 0.00 44.74 3.96
4188 13096 0.030369 GCATTGGCTAGAGCATGCAC 59.970 55.000 21.98 14.59 44.74 4.57
4189 13097 1.676746 CATTGGCTAGAGCATGCACT 58.323 50.000 21.45 21.45 44.36 4.40
4190 13098 2.022195 CATTGGCTAGAGCATGCACTT 58.978 47.619 22.83 8.33 44.36 3.16
4191 13099 1.742761 TTGGCTAGAGCATGCACTTC 58.257 50.000 22.83 14.30 44.36 3.01
4192 13100 0.907486 TGGCTAGAGCATGCACTTCT 59.093 50.000 22.83 17.00 44.36 2.85
4193 13101 2.110578 TGGCTAGAGCATGCACTTCTA 58.889 47.619 22.83 17.21 44.36 2.10
4194 13102 2.159043 TGGCTAGAGCATGCACTTCTAC 60.159 50.000 22.83 12.67 44.36 2.59
4195 13103 2.159043 GGCTAGAGCATGCACTTCTACA 60.159 50.000 22.83 3.70 44.36 2.74
4196 13104 3.494048 GGCTAGAGCATGCACTTCTACAT 60.494 47.826 22.83 0.00 44.36 2.29
4197 13105 3.493877 GCTAGAGCATGCACTTCTACATG 59.506 47.826 22.83 8.90 45.19 3.21
4198 13106 2.915349 AGAGCATGCACTTCTACATGG 58.085 47.619 21.98 0.00 43.13 3.66
4199 13107 2.795231 AGCATGCACTTCTACATGGT 57.205 45.000 21.98 2.10 46.94 3.55
4202 13110 4.739046 GCATGCACTTCTACATGGTATC 57.261 45.455 14.21 0.00 43.13 2.24
4203 13111 4.129380 GCATGCACTTCTACATGGTATCA 58.871 43.478 14.21 0.00 43.13 2.15
4204 13112 4.212847 GCATGCACTTCTACATGGTATCAG 59.787 45.833 14.21 0.00 43.13 2.90
4205 13113 5.604565 CATGCACTTCTACATGGTATCAGA 58.395 41.667 0.00 0.00 39.98 3.27
4206 13114 5.268118 TGCACTTCTACATGGTATCAGAG 57.732 43.478 0.00 0.00 0.00 3.35
4207 13115 4.054671 GCACTTCTACATGGTATCAGAGC 58.945 47.826 0.00 0.00 0.00 4.09
4208 13116 4.626042 CACTTCTACATGGTATCAGAGCC 58.374 47.826 0.00 0.00 0.00 4.70
4209 13117 4.100035 CACTTCTACATGGTATCAGAGCCA 59.900 45.833 0.00 0.00 39.33 4.75
4210 13118 4.716784 ACTTCTACATGGTATCAGAGCCAA 59.283 41.667 0.00 0.00 38.38 4.52
4211 13119 4.944619 TCTACATGGTATCAGAGCCAAG 57.055 45.455 0.00 0.10 38.38 3.61
4212 13120 4.546674 TCTACATGGTATCAGAGCCAAGA 58.453 43.478 0.00 1.07 38.38 3.02
4213 13121 3.834489 ACATGGTATCAGAGCCAAGAG 57.166 47.619 0.00 1.38 38.38 2.85
4214 13122 2.437281 ACATGGTATCAGAGCCAAGAGG 59.563 50.000 0.00 0.00 38.38 3.69
4215 13123 2.254152 TGGTATCAGAGCCAAGAGGT 57.746 50.000 0.00 0.00 37.19 3.85
4216 13124 2.111384 TGGTATCAGAGCCAAGAGGTC 58.889 52.381 0.00 0.00 43.67 3.85
4225 13133 4.273148 GAGCCAAGAGGTCTTAAGTTGA 57.727 45.455 1.63 0.00 40.01 3.18
4226 13134 3.997681 GAGCCAAGAGGTCTTAAGTTGAC 59.002 47.826 1.63 0.00 40.01 3.18
4231 13139 2.850439 GGTCTTAAGTTGACCCGGC 58.150 57.895 0.00 0.00 46.01 6.13
4232 13140 0.323957 GGTCTTAAGTTGACCCGGCT 59.676 55.000 0.00 0.00 46.01 5.52
4233 13141 1.439679 GTCTTAAGTTGACCCGGCTG 58.560 55.000 0.00 0.00 0.00 4.85
4234 13142 0.323629 TCTTAAGTTGACCCGGCTGG 59.676 55.000 3.88 3.88 41.37 4.85
4235 13143 1.302993 TTAAGTTGACCCGGCTGGC 60.303 57.895 5.85 0.00 37.83 4.85
4236 13144 3.599285 TAAGTTGACCCGGCTGGCG 62.599 63.158 17.39 17.39 37.83 5.69
4242 13150 4.418328 ACCCGGCTGGCGCAATTA 62.418 61.111 18.95 0.00 37.83 1.40
4243 13151 3.137459 CCCGGCTGGCGCAATTAA 61.137 61.111 18.95 0.00 38.10 1.40
4244 13152 2.705821 CCCGGCTGGCGCAATTAAA 61.706 57.895 18.95 0.00 38.10 1.52
4245 13153 1.214062 CCGGCTGGCGCAATTAAAA 59.786 52.632 18.95 0.00 38.10 1.52
4246 13154 0.179113 CCGGCTGGCGCAATTAAAAT 60.179 50.000 18.95 0.00 38.10 1.82
4247 13155 1.639280 CGGCTGGCGCAATTAAAATT 58.361 45.000 11.55 0.00 38.10 1.82
4248 13156 1.324134 CGGCTGGCGCAATTAAAATTG 59.676 47.619 11.55 10.43 46.55 2.32
4263 13171 8.776470 CAATTAAAATTGCAGTCCATTTTCAGT 58.224 29.630 9.51 0.00 39.29 3.41
4264 13172 7.945033 TTAAAATTGCAGTCCATTTTCAGTC 57.055 32.000 9.51 0.00 0.00 3.51
4265 13173 4.525912 AATTGCAGTCCATTTTCAGTCC 57.474 40.909 0.00 0.00 0.00 3.85
4266 13174 2.655090 TGCAGTCCATTTTCAGTCCA 57.345 45.000 0.00 0.00 0.00 4.02
4267 13175 2.229792 TGCAGTCCATTTTCAGTCCAC 58.770 47.619 0.00 0.00 0.00 4.02
4268 13176 1.197721 GCAGTCCATTTTCAGTCCACG 59.802 52.381 0.00 0.00 0.00 4.94
4269 13177 2.494059 CAGTCCATTTTCAGTCCACGT 58.506 47.619 0.00 0.00 0.00 4.49
4270 13178 2.878406 CAGTCCATTTTCAGTCCACGTT 59.122 45.455 0.00 0.00 0.00 3.99
4271 13179 3.315191 CAGTCCATTTTCAGTCCACGTTT 59.685 43.478 0.00 0.00 0.00 3.60
4272 13180 4.513692 CAGTCCATTTTCAGTCCACGTTTA 59.486 41.667 0.00 0.00 0.00 2.01
4273 13181 4.755123 AGTCCATTTTCAGTCCACGTTTAG 59.245 41.667 0.00 0.00 0.00 1.85
4274 13182 4.069304 TCCATTTTCAGTCCACGTTTAGG 58.931 43.478 0.00 0.00 0.00 2.69
4275 13183 3.365969 CCATTTTCAGTCCACGTTTAGGC 60.366 47.826 0.00 0.00 0.00 3.93
4276 13184 1.886886 TTTCAGTCCACGTTTAGGCC 58.113 50.000 0.00 0.00 0.00 5.19
4277 13185 1.053424 TTCAGTCCACGTTTAGGCCT 58.947 50.000 11.78 11.78 0.00 5.19
4278 13186 0.320374 TCAGTCCACGTTTAGGCCTG 59.680 55.000 17.99 0.00 0.00 4.85
4279 13187 0.320374 CAGTCCACGTTTAGGCCTGA 59.680 55.000 17.99 3.42 0.00 3.86
4280 13188 0.608640 AGTCCACGTTTAGGCCTGAG 59.391 55.000 17.99 6.27 0.00 3.35
4281 13189 0.391263 GTCCACGTTTAGGCCTGAGG 60.391 60.000 17.99 12.15 0.00 3.86
4282 13190 1.078426 CCACGTTTAGGCCTGAGGG 60.078 63.158 17.99 5.37 0.00 4.30
4283 13191 1.550130 CCACGTTTAGGCCTGAGGGA 61.550 60.000 17.99 0.00 33.58 4.20
4284 13192 0.108138 CACGTTTAGGCCTGAGGGAG 60.108 60.000 17.99 4.31 33.58 4.30
4285 13193 1.153349 CGTTTAGGCCTGAGGGAGC 60.153 63.158 17.99 0.00 33.58 4.70
4295 13203 4.803426 GAGGGAGCCACGCGTGAG 62.803 72.222 39.10 28.13 36.53 3.51
4298 13206 4.803426 GGAGCCACGCGTGAGGAG 62.803 72.222 39.10 23.35 0.00 3.69
4299 13207 4.803426 GAGCCACGCGTGAGGAGG 62.803 72.222 39.10 23.67 0.00 4.30
4301 13209 4.803426 GCCACGCGTGAGGAGGAG 62.803 72.222 39.10 21.51 0.00 3.69
4302 13210 3.374402 CCACGCGTGAGGAGGAGT 61.374 66.667 39.10 0.00 0.00 3.85
4303 13211 2.126307 CACGCGTGAGGAGGAGTG 60.126 66.667 34.93 1.87 32.61 3.51
4304 13212 2.597805 ACGCGTGAGGAGGAGTGT 60.598 61.111 12.93 0.00 0.00 3.55
4305 13213 2.201022 ACGCGTGAGGAGGAGTGTT 61.201 57.895 12.93 0.00 0.00 3.32
4306 13214 1.734477 CGCGTGAGGAGGAGTGTTG 60.734 63.158 0.00 0.00 0.00 3.33
4307 13215 1.666011 GCGTGAGGAGGAGTGTTGA 59.334 57.895 0.00 0.00 0.00 3.18
4308 13216 0.667792 GCGTGAGGAGGAGTGTTGAC 60.668 60.000 0.00 0.00 0.00 3.18
4309 13217 0.387367 CGTGAGGAGGAGTGTTGACG 60.387 60.000 0.00 0.00 0.00 4.35
4310 13218 0.674534 GTGAGGAGGAGTGTTGACGT 59.325 55.000 0.00 0.00 0.00 4.34
4311 13219 1.884579 GTGAGGAGGAGTGTTGACGTA 59.115 52.381 0.00 0.00 0.00 3.57
4312 13220 2.492484 GTGAGGAGGAGTGTTGACGTAT 59.508 50.000 0.00 0.00 0.00 3.06
4313 13221 3.693085 GTGAGGAGGAGTGTTGACGTATA 59.307 47.826 0.00 0.00 0.00 1.47
4314 13222 4.157289 GTGAGGAGGAGTGTTGACGTATAA 59.843 45.833 0.00 0.00 0.00 0.98
4315 13223 4.954202 TGAGGAGGAGTGTTGACGTATAAT 59.046 41.667 0.00 0.00 0.00 1.28
4316 13224 5.163550 TGAGGAGGAGTGTTGACGTATAATG 60.164 44.000 0.00 0.00 0.00 1.90
4317 13225 4.710375 AGGAGGAGTGTTGACGTATAATGT 59.290 41.667 0.00 0.00 0.00 2.71
4318 13226 4.804139 GGAGGAGTGTTGACGTATAATGTG 59.196 45.833 0.00 0.00 0.00 3.21
4319 13227 4.181578 AGGAGTGTTGACGTATAATGTGC 58.818 43.478 0.00 0.00 0.00 4.57
4320 13228 4.081642 AGGAGTGTTGACGTATAATGTGCT 60.082 41.667 0.00 0.00 0.00 4.40
4321 13229 4.032900 GGAGTGTTGACGTATAATGTGCTG 59.967 45.833 0.00 0.00 0.00 4.41
4322 13230 3.370978 AGTGTTGACGTATAATGTGCTGC 59.629 43.478 0.00 0.00 0.00 5.25
4323 13231 2.675844 TGTTGACGTATAATGTGCTGCC 59.324 45.455 0.00 0.00 0.00 4.85
4324 13232 2.936498 GTTGACGTATAATGTGCTGCCT 59.064 45.455 0.00 0.00 0.00 4.75
4325 13233 4.116961 GTTGACGTATAATGTGCTGCCTA 58.883 43.478 0.00 0.00 0.00 3.93
4326 13234 3.977427 TGACGTATAATGTGCTGCCTAG 58.023 45.455 0.00 0.00 0.00 3.02
4327 13235 3.383505 TGACGTATAATGTGCTGCCTAGT 59.616 43.478 0.00 0.00 0.00 2.57
4328 13236 3.978687 ACGTATAATGTGCTGCCTAGTC 58.021 45.455 0.00 0.00 0.00 2.59
4329 13237 3.637229 ACGTATAATGTGCTGCCTAGTCT 59.363 43.478 0.00 0.00 0.00 3.24
4330 13238 4.230657 CGTATAATGTGCTGCCTAGTCTC 58.769 47.826 0.00 0.00 0.00 3.36
4331 13239 4.022762 CGTATAATGTGCTGCCTAGTCTCT 60.023 45.833 0.00 0.00 0.00 3.10
4332 13240 5.508153 CGTATAATGTGCTGCCTAGTCTCTT 60.508 44.000 0.00 0.00 0.00 2.85
4333 13241 2.977772 ATGTGCTGCCTAGTCTCTTC 57.022 50.000 0.00 0.00 0.00 2.87
4334 13242 0.898320 TGTGCTGCCTAGTCTCTTCC 59.102 55.000 0.00 0.00 0.00 3.46
4335 13243 0.898320 GTGCTGCCTAGTCTCTTCCA 59.102 55.000 0.00 0.00 0.00 3.53
4336 13244 1.484240 GTGCTGCCTAGTCTCTTCCAT 59.516 52.381 0.00 0.00 0.00 3.41
4337 13245 1.759445 TGCTGCCTAGTCTCTTCCATC 59.241 52.381 0.00 0.00 0.00 3.51
4338 13246 1.759445 GCTGCCTAGTCTCTTCCATCA 59.241 52.381 0.00 0.00 0.00 3.07
4339 13247 2.224018 GCTGCCTAGTCTCTTCCATCAG 60.224 54.545 0.00 0.00 0.00 2.90
4340 13248 3.295093 CTGCCTAGTCTCTTCCATCAGA 58.705 50.000 0.00 0.00 0.00 3.27
4341 13249 3.896888 CTGCCTAGTCTCTTCCATCAGAT 59.103 47.826 0.00 0.00 0.00 2.90
4342 13250 3.894427 TGCCTAGTCTCTTCCATCAGATC 59.106 47.826 0.00 0.00 0.00 2.75
4343 13251 3.057596 GCCTAGTCTCTTCCATCAGATCG 60.058 52.174 0.00 0.00 0.00 3.69
4344 13252 3.505680 CCTAGTCTCTTCCATCAGATCGG 59.494 52.174 0.00 0.00 0.00 4.18
4345 13253 3.025322 AGTCTCTTCCATCAGATCGGT 57.975 47.619 0.00 0.00 0.00 4.69
4346 13254 2.955660 AGTCTCTTCCATCAGATCGGTC 59.044 50.000 0.00 0.00 0.00 4.79
4347 13255 2.955660 GTCTCTTCCATCAGATCGGTCT 59.044 50.000 0.00 0.00 34.14 3.85
4348 13256 3.383185 GTCTCTTCCATCAGATCGGTCTT 59.617 47.826 0.00 0.00 30.42 3.01
4349 13257 4.026744 TCTCTTCCATCAGATCGGTCTTT 58.973 43.478 0.00 0.00 30.42 2.52
4350 13258 4.467795 TCTCTTCCATCAGATCGGTCTTTT 59.532 41.667 0.00 0.00 30.42 2.27
4351 13259 4.507710 TCTTCCATCAGATCGGTCTTTTG 58.492 43.478 0.00 0.00 30.42 2.44
4352 13260 3.266510 TCCATCAGATCGGTCTTTTGG 57.733 47.619 14.89 14.89 36.16 3.28
4353 13261 2.571653 TCCATCAGATCGGTCTTTTGGT 59.428 45.455 18.67 0.00 36.21 3.67
4354 13262 3.009033 TCCATCAGATCGGTCTTTTGGTT 59.991 43.478 18.67 0.00 36.21 3.67
4355 13263 3.127548 CCATCAGATCGGTCTTTTGGTTG 59.872 47.826 13.38 1.42 32.74 3.77
4356 13264 2.151202 TCAGATCGGTCTTTTGGTTGC 58.849 47.619 0.00 0.00 30.42 4.17
4357 13265 1.879380 CAGATCGGTCTTTTGGTTGCA 59.121 47.619 0.00 0.00 30.42 4.08
4358 13266 2.489329 CAGATCGGTCTTTTGGTTGCAT 59.511 45.455 0.00 0.00 30.42 3.96
4359 13267 3.057315 CAGATCGGTCTTTTGGTTGCATT 60.057 43.478 0.00 0.00 30.42 3.56
4360 13268 2.791383 TCGGTCTTTTGGTTGCATTG 57.209 45.000 0.00 0.00 0.00 2.82
4361 13269 1.339610 TCGGTCTTTTGGTTGCATTGG 59.660 47.619 0.00 0.00 0.00 3.16
4362 13270 1.511850 GGTCTTTTGGTTGCATTGGC 58.488 50.000 0.00 0.00 41.68 4.52
4363 13271 1.070601 GGTCTTTTGGTTGCATTGGCT 59.929 47.619 0.00 0.00 41.91 4.75
4364 13272 2.298729 GGTCTTTTGGTTGCATTGGCTA 59.701 45.455 0.00 0.00 41.91 3.93
4365 13273 3.578688 GTCTTTTGGTTGCATTGGCTAG 58.421 45.455 0.00 0.00 41.91 3.42
4366 13274 3.255642 GTCTTTTGGTTGCATTGGCTAGA 59.744 43.478 0.00 0.00 41.91 2.43
4367 13275 3.507233 TCTTTTGGTTGCATTGGCTAGAG 59.493 43.478 0.00 0.00 41.91 2.43
4368 13276 1.176527 TTGGTTGCATTGGCTAGAGC 58.823 50.000 0.00 0.00 41.91 4.09
4369 13277 0.038021 TGGTTGCATTGGCTAGAGCA 59.962 50.000 3.54 0.00 44.36 4.26
4370 13278 1.341285 TGGTTGCATTGGCTAGAGCAT 60.341 47.619 3.54 0.00 44.36 3.79
4371 13279 1.066605 GGTTGCATTGGCTAGAGCATG 59.933 52.381 3.54 0.90 44.36 4.06
4372 13280 0.742505 TTGCATTGGCTAGAGCATGC 59.257 50.000 10.51 10.51 45.25 4.06
4373 13281 2.411535 GCATTGGCTAGAGCATGCA 58.588 52.632 21.98 0.00 44.74 3.96
4374 13282 0.030369 GCATTGGCTAGAGCATGCAC 59.970 55.000 21.98 14.59 44.74 4.57
4375 13283 1.676746 CATTGGCTAGAGCATGCACT 58.323 50.000 21.45 21.45 44.36 4.40
4376 13284 2.022195 CATTGGCTAGAGCATGCACTT 58.978 47.619 22.83 8.33 44.36 3.16
4377 13285 1.742761 TTGGCTAGAGCATGCACTTC 58.257 50.000 22.83 14.30 44.36 3.01
4378 13286 0.907486 TGGCTAGAGCATGCACTTCT 59.093 50.000 22.83 17.00 44.36 2.85
4379 13287 2.110578 TGGCTAGAGCATGCACTTCTA 58.889 47.619 22.83 17.21 44.36 2.10
4380 13288 2.159043 TGGCTAGAGCATGCACTTCTAC 60.159 50.000 22.83 12.67 44.36 2.59
4381 13289 2.159043 GGCTAGAGCATGCACTTCTACA 60.159 50.000 22.83 3.70 44.36 2.74
4382 13290 3.122297 GCTAGAGCATGCACTTCTACAG 58.878 50.000 22.83 14.19 41.59 2.74
4383 13291 2.021355 AGAGCATGCACTTCTACAGC 57.979 50.000 21.98 0.00 0.00 4.40
4403 13311 4.511246 CCATGGCGCTCCCCACAT 62.511 66.667 7.64 0.00 37.79 3.21
4527 13436 2.322830 CGAGTCGAGTCGTGGGTCA 61.323 63.158 29.91 0.00 35.14 4.02
4561 13476 2.668457 CACCTCATACGCTGTGAAGTTC 59.332 50.000 0.00 0.00 0.00 3.01
4565 13480 0.246635 ATACGCTGTGAAGTTCGCCT 59.753 50.000 13.71 0.00 0.00 5.52
4593 13511 9.170890 TCAGGATAATTTATATTCCTGTGAGGT 57.829 33.333 17.91 0.00 43.61 3.85
4604 13522 2.743928 GTGAGGTGCTTCAGGCCG 60.744 66.667 0.00 0.00 40.92 6.13
4610 13528 3.939939 TGCTTCAGGCCGCACAGA 61.940 61.111 0.00 0.00 40.92 3.41
4640 13559 0.399075 ACCCACAGGAAAAGTACGGG 59.601 55.000 0.00 0.00 38.23 5.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 0.534203 TTTTTCCTCGTTGCTCGGCT 60.534 50.000 2.56 0.00 40.32 5.52
69 70 4.600207 GGAGAACCGAACCTGCTC 57.400 61.111 0.00 0.00 0.00 4.26
105 106 0.884259 TCTCCGTGTACGACACCGAA 60.884 55.000 5.91 2.29 45.93 4.30
173 174 3.682377 GCAGCTTAAGAGGAGAACTGAAC 59.318 47.826 6.67 0.00 0.00 3.18
175 176 2.899900 TGCAGCTTAAGAGGAGAACTGA 59.100 45.455 6.67 0.00 0.00 3.41
177 178 2.027653 GGTGCAGCTTAAGAGGAGAACT 60.028 50.000 9.07 0.00 0.00 3.01
278 286 1.338655 TGATCACGTTGAGACACCGAA 59.661 47.619 0.00 0.00 0.00 4.30
452 512 2.876368 AAAATCAGAGCCCCGGAGCG 62.876 60.000 0.73 0.00 38.01 5.03
454 514 0.811616 CGAAAATCAGAGCCCCGGAG 60.812 60.000 0.73 0.00 0.00 4.63
455 515 1.220749 CGAAAATCAGAGCCCCGGA 59.779 57.895 0.73 0.00 0.00 5.14
456 516 1.819632 CCGAAAATCAGAGCCCCGG 60.820 63.158 0.00 0.00 0.00 5.73
457 517 2.472909 GCCGAAAATCAGAGCCCCG 61.473 63.158 0.00 0.00 0.00 5.73
458 518 2.121538 GGCCGAAAATCAGAGCCCC 61.122 63.158 0.00 0.00 37.66 5.80
459 519 2.472909 CGGCCGAAAATCAGAGCCC 61.473 63.158 24.07 0.00 40.65 5.19
460 520 1.024579 TTCGGCCGAAAATCAGAGCC 61.025 55.000 37.13 0.00 40.33 4.70
461 521 0.802494 TTTCGGCCGAAAATCAGAGC 59.198 50.000 42.69 0.00 40.63 4.09
479 539 5.447624 AATTCGACCGAAATCCACTTTTT 57.552 34.783 8.97 0.00 37.69 1.94
482 542 3.124636 CGAAATTCGACCGAAATCCACTT 59.875 43.478 10.18 0.00 43.74 3.16
484 544 2.222953 CCGAAATTCGACCGAAATCCAC 60.223 50.000 17.75 0.05 43.74 4.02
485 545 2.004017 CCGAAATTCGACCGAAATCCA 58.996 47.619 17.75 0.00 43.74 3.41
486 546 1.267882 GCCGAAATTCGACCGAAATCC 60.268 52.381 17.75 0.98 43.74 3.01
487 547 1.267882 GGCCGAAATTCGACCGAAATC 60.268 52.381 17.75 9.41 43.74 2.17
488 548 0.730840 GGCCGAAATTCGACCGAAAT 59.269 50.000 17.75 0.00 43.74 2.17
491 551 0.808453 GATGGCCGAAATTCGACCGA 60.808 55.000 17.75 6.17 45.76 4.69
492 552 0.810031 AGATGGCCGAAATTCGACCG 60.810 55.000 17.75 1.16 45.76 4.79
493 553 0.938008 GAGATGGCCGAAATTCGACC 59.062 55.000 17.75 15.70 43.00 4.79
494 554 0.577269 CGAGATGGCCGAAATTCGAC 59.423 55.000 17.75 4.81 43.74 4.20
496 556 1.934463 CCGAGATGGCCGAAATTCG 59.066 57.895 8.62 8.62 40.07 3.34
515 575 4.760204 CCTAAATATACTTTTCGCCCCAGG 59.240 45.833 0.00 0.00 0.00 4.45
516 576 4.215613 GCCTAAATATACTTTTCGCCCCAG 59.784 45.833 0.00 0.00 0.00 4.45
518 578 3.504906 GGCCTAAATATACTTTTCGCCCC 59.495 47.826 0.00 0.00 32.16 5.80
519 579 3.187842 CGGCCTAAATATACTTTTCGCCC 59.812 47.826 0.00 0.00 33.61 6.13
520 580 4.060205 TCGGCCTAAATATACTTTTCGCC 58.940 43.478 0.00 0.00 33.74 5.54
521 581 5.662211 TTCGGCCTAAATATACTTTTCGC 57.338 39.130 0.00 0.00 0.00 4.70
522 582 7.112984 GCAATTTCGGCCTAAATATACTTTTCG 59.887 37.037 15.07 0.00 0.00 3.46
524 584 8.007405 AGCAATTTCGGCCTAAATATACTTTT 57.993 30.769 15.07 0.00 0.00 2.27
525 585 7.284489 TGAGCAATTTCGGCCTAAATATACTTT 59.716 33.333 15.07 0.00 0.00 2.66
526 586 6.770785 TGAGCAATTTCGGCCTAAATATACTT 59.229 34.615 15.07 0.00 0.00 2.24
527 587 6.296026 TGAGCAATTTCGGCCTAAATATACT 58.704 36.000 15.07 12.25 0.00 2.12
528 588 6.554334 TGAGCAATTTCGGCCTAAATATAC 57.446 37.500 15.07 8.19 0.00 1.47
529 589 7.575414 TTTGAGCAATTTCGGCCTAAATATA 57.425 32.000 15.07 0.00 0.00 0.86
530 590 6.463995 TTTGAGCAATTTCGGCCTAAATAT 57.536 33.333 15.07 5.39 0.00 1.28
531 591 5.906113 TTTGAGCAATTTCGGCCTAAATA 57.094 34.783 15.07 0.00 0.00 1.40
532 592 4.799564 TTTGAGCAATTTCGGCCTAAAT 57.200 36.364 9.37 9.37 0.00 1.40
533 593 4.799564 ATTTGAGCAATTTCGGCCTAAA 57.200 36.364 4.72 4.72 0.00 1.85
534 594 4.799564 AATTTGAGCAATTTCGGCCTAA 57.200 36.364 0.00 0.00 30.09 2.69
535 595 4.493547 CAAATTTGAGCAATTTCGGCCTA 58.506 39.130 13.08 0.00 42.28 3.93
536 596 3.328505 CAAATTTGAGCAATTTCGGCCT 58.671 40.909 13.08 0.00 42.28 5.19
537 597 2.416202 CCAAATTTGAGCAATTTCGGCC 59.584 45.455 19.86 0.00 42.28 6.13
538 598 2.159667 GCCAAATTTGAGCAATTTCGGC 60.160 45.455 19.86 6.43 42.28 5.54
539 599 3.065655 TGCCAAATTTGAGCAATTTCGG 58.934 40.909 23.49 5.87 42.28 4.30
541 601 7.933728 AATTTTGCCAAATTTGAGCAATTTC 57.066 28.000 30.39 10.25 42.28 2.17
588 648 9.326413 TCAAAAATTTCGGCTAAAATTTAACCA 57.674 25.926 16.99 5.41 44.17 3.67
594 654 9.676195 CCATTTTCAAAAATTTCGGCTAAAATT 57.324 25.926 0.00 4.43 39.83 1.82
596 656 7.135467 GCCATTTTCAAAAATTTCGGCTAAAA 58.865 30.769 15.51 0.00 39.74 1.52
598 658 5.760253 TGCCATTTTCAAAAATTTCGGCTAA 59.240 32.000 20.04 6.72 41.68 3.09
600 660 4.133078 TGCCATTTTCAAAAATTTCGGCT 58.867 34.783 20.04 0.00 41.68 5.52
601 661 4.213059 TCTGCCATTTTCAAAAATTTCGGC 59.787 37.500 15.75 15.75 41.58 5.54
602 662 5.921004 TCTGCCATTTTCAAAAATTTCGG 57.079 34.783 0.00 0.00 36.52 4.30
603 663 8.785468 AATTTCTGCCATTTTCAAAAATTTCG 57.215 26.923 0.00 0.00 36.52 3.46
604 664 8.894864 CGAATTTCTGCCATTTTCAAAAATTTC 58.105 29.630 0.00 0.00 36.52 2.17
605 665 8.619546 TCGAATTTCTGCCATTTTCAAAAATTT 58.380 25.926 0.00 0.00 36.52 1.82
607 667 7.307930 GGTCGAATTTCTGCCATTTTCAAAAAT 60.308 33.333 0.00 0.00 39.07 1.82
608 668 6.018343 GGTCGAATTTCTGCCATTTTCAAAAA 60.018 34.615 0.00 0.00 0.00 1.94
609 669 5.465056 GGTCGAATTTCTGCCATTTTCAAAA 59.535 36.000 0.00 0.00 0.00 2.44
610 670 4.987912 GGTCGAATTTCTGCCATTTTCAAA 59.012 37.500 0.00 0.00 0.00 2.69
611 671 4.038522 TGGTCGAATTTCTGCCATTTTCAA 59.961 37.500 0.00 0.00 0.00 2.69
612 672 3.571828 TGGTCGAATTTCTGCCATTTTCA 59.428 39.130 0.00 0.00 0.00 2.69
614 674 4.463891 AGATGGTCGAATTTCTGCCATTTT 59.536 37.500 17.12 9.96 39.74 1.82
615 675 4.019174 AGATGGTCGAATTTCTGCCATTT 58.981 39.130 17.12 11.83 39.74 2.32
616 676 3.624777 AGATGGTCGAATTTCTGCCATT 58.375 40.909 17.12 8.93 39.74 3.16
617 677 3.209410 GAGATGGTCGAATTTCTGCCAT 58.791 45.455 16.44 16.44 42.04 4.40
630 690 2.873525 GCCCTAGGCCGAGATGGTC 61.874 68.421 15.38 1.25 44.06 4.02
631 691 2.844839 GCCCTAGGCCGAGATGGT 60.845 66.667 15.38 0.00 44.06 3.55
653 713 8.355913 TGTTTTGATTTTTGGTTTGAGCTTTTT 58.644 25.926 0.00 0.00 0.00 1.94
654 714 7.807433 GTGTTTTGATTTTTGGTTTGAGCTTTT 59.193 29.630 0.00 0.00 0.00 2.27
655 715 7.040823 TGTGTTTTGATTTTTGGTTTGAGCTTT 60.041 29.630 0.00 0.00 0.00 3.51
656 716 6.429385 TGTGTTTTGATTTTTGGTTTGAGCTT 59.571 30.769 0.00 0.00 0.00 3.74
657 717 5.936956 TGTGTTTTGATTTTTGGTTTGAGCT 59.063 32.000 0.00 0.00 0.00 4.09
658 718 6.175712 TGTGTTTTGATTTTTGGTTTGAGC 57.824 33.333 0.00 0.00 0.00 4.26
659 719 6.675244 GCCTGTGTTTTGATTTTTGGTTTGAG 60.675 38.462 0.00 0.00 0.00 3.02
661 721 5.123661 AGCCTGTGTTTTGATTTTTGGTTTG 59.876 36.000 0.00 0.00 0.00 2.93
662 722 5.252547 AGCCTGTGTTTTGATTTTTGGTTT 58.747 33.333 0.00 0.00 0.00 3.27
663 723 4.842574 AGCCTGTGTTTTGATTTTTGGTT 58.157 34.783 0.00 0.00 0.00 3.67
664 724 4.441792 GAGCCTGTGTTTTGATTTTTGGT 58.558 39.130 0.00 0.00 0.00 3.67
666 726 3.060339 GCGAGCCTGTGTTTTGATTTTTG 60.060 43.478 0.00 0.00 0.00 2.44
668 728 2.362077 AGCGAGCCTGTGTTTTGATTTT 59.638 40.909 0.00 0.00 0.00 1.82
669 729 1.956477 AGCGAGCCTGTGTTTTGATTT 59.044 42.857 0.00 0.00 0.00 2.17
670 730 1.267806 CAGCGAGCCTGTGTTTTGATT 59.732 47.619 0.00 0.00 36.79 2.57
671 731 0.877071 CAGCGAGCCTGTGTTTTGAT 59.123 50.000 0.00 0.00 36.79 2.57
672 732 1.165907 CCAGCGAGCCTGTGTTTTGA 61.166 55.000 0.00 0.00 40.06 2.69
673 733 1.283793 CCAGCGAGCCTGTGTTTTG 59.716 57.895 0.00 0.00 40.06 2.44
675 735 2.980233 GCCAGCGAGCCTGTGTTT 60.980 61.111 0.00 0.00 40.06 2.83
676 736 4.254709 TGCCAGCGAGCCTGTGTT 62.255 61.111 0.00 0.00 40.06 3.32
677 737 4.694233 CTGCCAGCGAGCCTGTGT 62.694 66.667 0.00 0.00 40.06 3.72
678 738 3.889134 TTCTGCCAGCGAGCCTGTG 62.889 63.158 0.00 0.00 40.06 3.66
679 739 3.602513 CTTCTGCCAGCGAGCCTGT 62.603 63.158 0.00 0.00 40.06 4.00
681 741 4.774503 GCTTCTGCCAGCGAGCCT 62.775 66.667 8.24 0.00 0.00 4.58
683 743 2.524636 CTTTGCTTCTGCCAGCGAGC 62.525 60.000 11.50 11.50 43.37 5.03
1123 1204 4.396166 TGCTGCTTTCTATGCTAGTTTTCC 59.604 41.667 0.00 0.00 0.00 3.13
1314 1403 3.248495 TCAGTGTAACCGTTTGACACA 57.752 42.857 16.15 1.24 44.77 3.72
1390 1499 2.096713 CGGAGAGCTCTTTCACGTTTTG 60.097 50.000 19.36 0.00 0.00 2.44
1590 1735 1.001641 ATCCACTGAGCCACTTGCC 60.002 57.895 0.00 0.00 42.71 4.52
1832 4174 2.767505 ACTCAAAAGATCGTCCACCAC 58.232 47.619 0.00 0.00 0.00 4.16
1849 4194 4.928661 TGAAATAAGCTCTTGCGAACTC 57.071 40.909 0.00 0.00 45.42 3.01
1959 4307 9.877178 ATATATCCAACAATAAGACGAGGATTC 57.123 33.333 0.00 0.00 36.02 2.52
2169 4535 2.024414 GTGTCCAACTGCCAAACTCTT 58.976 47.619 0.00 0.00 0.00 2.85
2189 4555 2.546778 GCATTGGCATCAGAAACATGG 58.453 47.619 0.00 0.00 40.72 3.66
2328 6146 3.281727 TCACCATCCTTTAGCATGACC 57.718 47.619 0.00 0.00 0.00 4.02
2649 7945 3.547413 CGACGAACACAGTGAGTAACAGA 60.547 47.826 7.81 0.00 0.00 3.41
3369 12141 2.992689 TGGTACGCTGCTTCCGGA 60.993 61.111 0.00 0.00 0.00 5.14
3386 12158 2.561569 CCAACAACTCGACCAACTTCT 58.438 47.619 0.00 0.00 0.00 2.85
3491 12263 4.335647 CGGCCAGCAACTCCCACT 62.336 66.667 2.24 0.00 0.00 4.00
3552 12324 1.073722 CTGCAGGTGCCCTTTGAGA 59.926 57.895 5.57 0.00 41.18 3.27
3674 12452 3.181480 GGCAGAGCAAACTTAAACACCAA 60.181 43.478 0.00 0.00 0.00 3.67
3755 12538 3.627395 AACACACTGACAACCAAGAGA 57.373 42.857 0.00 0.00 0.00 3.10
3767 12553 3.627577 ACAGCAAGACCTTAAACACACTG 59.372 43.478 0.00 0.00 0.00 3.66
3861 12666 2.816087 CCCACACACTTCCAATCTCTTG 59.184 50.000 0.00 0.00 0.00 3.02
3903 12709 4.379082 CCAGAAGCGGTAAAACAATACCAC 60.379 45.833 4.54 0.00 44.68 4.16
3946 12754 7.168219 AGCACCACAAACTTCTCATATCTTTA 58.832 34.615 0.00 0.00 0.00 1.85
3984 12795 5.319043 AGGTTAAGAAGTCACATTCCCAA 57.681 39.130 0.00 0.00 0.00 4.12
4001 12812 7.496747 ACTACACAACGGTTTAGTAAAGGTTA 58.503 34.615 10.19 0.00 38.43 2.85
4020 12928 3.184541 CACGGGCTACACATAACTACAC 58.815 50.000 0.00 0.00 0.00 2.90
4021 12929 2.827322 ACACGGGCTACACATAACTACA 59.173 45.455 0.00 0.00 0.00 2.74
4042 12950 2.927856 TCTTCCTCCGGCCTTGCA 60.928 61.111 0.00 0.00 0.00 4.08
4056 12964 2.693069 CGATGCAAGGAGTTGTCTCTT 58.307 47.619 0.00 0.00 40.29 2.85
4085 12993 0.458543 CTCCTCAACGACATGGACCG 60.459 60.000 0.00 0.00 0.00 4.79
4086 12994 0.741221 GCTCCTCAACGACATGGACC 60.741 60.000 0.00 0.00 0.00 4.46
4087 12995 1.078759 CGCTCCTCAACGACATGGAC 61.079 60.000 0.00 0.00 0.00 4.02
4088 12996 1.215382 CGCTCCTCAACGACATGGA 59.785 57.895 0.00 0.00 0.00 3.41
4089 12997 2.456119 GCGCTCCTCAACGACATGG 61.456 63.158 0.00 0.00 0.00 3.66
4090 12998 1.291184 TTGCGCTCCTCAACGACATG 61.291 55.000 9.73 0.00 0.00 3.21
4091 12999 0.391661 ATTGCGCTCCTCAACGACAT 60.392 50.000 9.73 0.00 0.00 3.06
4092 13000 1.005037 ATTGCGCTCCTCAACGACA 60.005 52.632 9.73 0.00 0.00 4.35
4113 13021 5.313623 GCAACACATTATACGTCAACAGAC 58.686 41.667 0.00 0.00 0.00 3.51
4114 13022 4.390603 GGCAACACATTATACGTCAACAGA 59.609 41.667 0.00 0.00 0.00 3.41
4115 13023 4.391830 AGGCAACACATTATACGTCAACAG 59.608 41.667 0.00 0.00 41.41 3.16
4116 13024 4.320023 AGGCAACACATTATACGTCAACA 58.680 39.130 0.00 0.00 41.41 3.33
4117 13025 4.939509 AGGCAACACATTATACGTCAAC 57.060 40.909 0.00 0.00 41.41 3.18
4118 13026 5.726397 ACTAGGCAACACATTATACGTCAA 58.274 37.500 0.00 0.00 41.41 3.18
4119 13027 5.126545 AGACTAGGCAACACATTATACGTCA 59.873 40.000 0.00 0.00 41.41 4.35
4120 13028 5.589192 AGACTAGGCAACACATTATACGTC 58.411 41.667 0.00 0.00 41.41 4.34
4121 13029 5.360144 AGAGACTAGGCAACACATTATACGT 59.640 40.000 0.00 0.00 41.41 3.57
4122 13030 5.833082 AGAGACTAGGCAACACATTATACG 58.167 41.667 0.00 0.00 41.41 3.06
4123 13031 7.764443 TGAAAGAGACTAGGCAACACATTATAC 59.236 37.037 0.00 0.00 41.41 1.47
4124 13032 7.847096 TGAAAGAGACTAGGCAACACATTATA 58.153 34.615 0.00 0.00 41.41 0.98
4125 13033 6.711277 TGAAAGAGACTAGGCAACACATTAT 58.289 36.000 0.00 0.00 41.41 1.28
4126 13034 6.109156 TGAAAGAGACTAGGCAACACATTA 57.891 37.500 0.00 0.00 41.41 1.90
4127 13035 4.973168 TGAAAGAGACTAGGCAACACATT 58.027 39.130 0.00 0.00 41.41 2.71
4128 13036 4.623932 TGAAAGAGACTAGGCAACACAT 57.376 40.909 0.00 0.00 41.41 3.21
4129 13037 4.623932 ATGAAAGAGACTAGGCAACACA 57.376 40.909 0.00 0.00 41.41 3.72
4130 13038 6.398918 TCTAATGAAAGAGACTAGGCAACAC 58.601 40.000 0.00 0.00 41.41 3.32
4131 13039 6.605471 TCTAATGAAAGAGACTAGGCAACA 57.395 37.500 0.00 0.00 41.41 3.33
4132 13040 6.419413 CGATCTAATGAAAGAGACTAGGCAAC 59.581 42.308 0.00 0.00 0.00 4.17
4133 13041 6.461648 CCGATCTAATGAAAGAGACTAGGCAA 60.462 42.308 0.00 0.00 0.00 4.52
4134 13042 5.010112 CCGATCTAATGAAAGAGACTAGGCA 59.990 44.000 0.00 0.00 0.00 4.75
4135 13043 5.010213 ACCGATCTAATGAAAGAGACTAGGC 59.990 44.000 0.00 0.00 0.00 3.93
4136 13044 6.488683 AGACCGATCTAATGAAAGAGACTAGG 59.511 42.308 0.00 0.00 31.46 3.02
4137 13045 7.504924 AGACCGATCTAATGAAAGAGACTAG 57.495 40.000 0.00 0.00 31.46 2.57
4138 13046 7.883391 AAGACCGATCTAATGAAAGAGACTA 57.117 36.000 0.00 0.00 33.57 2.59
4139 13047 6.783708 AAGACCGATCTAATGAAAGAGACT 57.216 37.500 0.00 0.00 33.57 3.24
4140 13048 7.201565 CCAAAAGACCGATCTAATGAAAGAGAC 60.202 40.741 0.00 0.00 33.57 3.36
4141 13049 6.818644 CCAAAAGACCGATCTAATGAAAGAGA 59.181 38.462 0.00 0.00 33.57 3.10
4142 13050 6.595716 ACCAAAAGACCGATCTAATGAAAGAG 59.404 38.462 0.00 0.00 33.57 2.85
4143 13051 6.472887 ACCAAAAGACCGATCTAATGAAAGA 58.527 36.000 0.00 0.00 33.57 2.52
4144 13052 6.743575 ACCAAAAGACCGATCTAATGAAAG 57.256 37.500 0.00 0.00 33.57 2.62
4145 13053 6.569610 GCAACCAAAAGACCGATCTAATGAAA 60.570 38.462 0.00 0.00 33.57 2.69
4146 13054 5.106317 GCAACCAAAAGACCGATCTAATGAA 60.106 40.000 0.00 0.00 33.57 2.57
4147 13055 4.394920 GCAACCAAAAGACCGATCTAATGA 59.605 41.667 0.00 0.00 33.57 2.57
4148 13056 4.155826 TGCAACCAAAAGACCGATCTAATG 59.844 41.667 0.00 0.00 33.57 1.90
4149 13057 4.331968 TGCAACCAAAAGACCGATCTAAT 58.668 39.130 0.00 0.00 33.57 1.73
4150 13058 3.745799 TGCAACCAAAAGACCGATCTAA 58.254 40.909 0.00 0.00 33.57 2.10
4151 13059 3.410631 TGCAACCAAAAGACCGATCTA 57.589 42.857 0.00 0.00 33.57 1.98
4152 13060 2.270352 TGCAACCAAAAGACCGATCT 57.730 45.000 0.00 0.00 36.42 2.75
4153 13061 3.244976 CAATGCAACCAAAAGACCGATC 58.755 45.455 0.00 0.00 0.00 3.69
4154 13062 2.029110 CCAATGCAACCAAAAGACCGAT 60.029 45.455 0.00 0.00 0.00 4.18
4155 13063 1.339610 CCAATGCAACCAAAAGACCGA 59.660 47.619 0.00 0.00 0.00 4.69
4156 13064 1.782044 CCAATGCAACCAAAAGACCG 58.218 50.000 0.00 0.00 0.00 4.79
4157 13065 1.070601 AGCCAATGCAACCAAAAGACC 59.929 47.619 0.00 0.00 41.13 3.85
4158 13066 2.531522 AGCCAATGCAACCAAAAGAC 57.468 45.000 0.00 0.00 41.13 3.01
4159 13067 3.495331 TCTAGCCAATGCAACCAAAAGA 58.505 40.909 0.00 0.00 41.13 2.52
4160 13068 3.841643 CTCTAGCCAATGCAACCAAAAG 58.158 45.455 0.00 0.00 41.13 2.27
4161 13069 2.029110 GCTCTAGCCAATGCAACCAAAA 60.029 45.455 0.00 0.00 41.13 2.44
4162 13070 1.545582 GCTCTAGCCAATGCAACCAAA 59.454 47.619 0.00 0.00 41.13 3.28
4163 13071 1.176527 GCTCTAGCCAATGCAACCAA 58.823 50.000 0.00 0.00 41.13 3.67
4164 13072 0.038021 TGCTCTAGCCAATGCAACCA 59.962 50.000 0.00 0.00 41.13 3.67
4165 13073 1.066605 CATGCTCTAGCCAATGCAACC 59.933 52.381 0.00 0.00 41.13 3.77
4166 13074 1.535437 GCATGCTCTAGCCAATGCAAC 60.535 52.381 11.37 2.38 44.74 4.17
4167 13075 0.742505 GCATGCTCTAGCCAATGCAA 59.257 50.000 11.37 0.00 44.74 4.08
4168 13076 2.411535 GCATGCTCTAGCCAATGCA 58.588 52.632 11.37 0.00 44.74 3.96
4169 13077 0.030369 GTGCATGCTCTAGCCAATGC 59.970 55.000 20.33 16.33 45.25 3.56
4170 13078 1.676746 AGTGCATGCTCTAGCCAATG 58.323 50.000 20.22 0.00 41.18 2.82
4171 13079 2.092538 AGAAGTGCATGCTCTAGCCAAT 60.093 45.455 21.70 5.92 41.18 3.16
4172 13080 1.280133 AGAAGTGCATGCTCTAGCCAA 59.720 47.619 21.70 0.00 41.18 4.52
4173 13081 0.907486 AGAAGTGCATGCTCTAGCCA 59.093 50.000 21.70 0.00 41.18 4.75
4174 13082 2.159043 TGTAGAAGTGCATGCTCTAGCC 60.159 50.000 21.70 13.81 41.18 3.93
4175 13083 3.170791 TGTAGAAGTGCATGCTCTAGC 57.829 47.619 21.70 16.29 42.50 3.42
4176 13084 4.056740 CCATGTAGAAGTGCATGCTCTAG 58.943 47.826 21.70 7.70 43.45 2.43
4177 13085 3.452264 ACCATGTAGAAGTGCATGCTCTA 59.548 43.478 21.70 15.62 43.45 2.43
4178 13086 2.238144 ACCATGTAGAAGTGCATGCTCT 59.762 45.455 20.33 18.23 43.45 4.09
4179 13087 2.636830 ACCATGTAGAAGTGCATGCTC 58.363 47.619 20.33 15.94 43.45 4.26
4180 13088 2.795231 ACCATGTAGAAGTGCATGCT 57.205 45.000 20.33 0.00 43.45 3.79
4181 13089 4.129380 TGATACCATGTAGAAGTGCATGC 58.871 43.478 11.82 11.82 43.45 4.06
4182 13090 5.604565 TCTGATACCATGTAGAAGTGCATG 58.395 41.667 0.00 0.00 44.17 4.06
4183 13091 5.741383 GCTCTGATACCATGTAGAAGTGCAT 60.741 44.000 0.00 0.00 0.00 3.96
4184 13092 4.442052 GCTCTGATACCATGTAGAAGTGCA 60.442 45.833 0.00 0.00 0.00 4.57
4185 13093 4.054671 GCTCTGATACCATGTAGAAGTGC 58.945 47.826 0.00 0.00 0.00 4.40
4186 13094 4.100035 TGGCTCTGATACCATGTAGAAGTG 59.900 45.833 0.00 0.00 0.00 3.16
4187 13095 4.290093 TGGCTCTGATACCATGTAGAAGT 58.710 43.478 0.00 0.00 0.00 3.01
4188 13096 4.944619 TGGCTCTGATACCATGTAGAAG 57.055 45.455 0.00 0.00 0.00 2.85
4189 13097 4.962362 TCTTGGCTCTGATACCATGTAGAA 59.038 41.667 10.55 0.00 35.42 2.10
4190 13098 4.546674 TCTTGGCTCTGATACCATGTAGA 58.453 43.478 10.55 4.92 35.42 2.59
4191 13099 4.262377 CCTCTTGGCTCTGATACCATGTAG 60.262 50.000 10.55 3.17 35.42 2.74
4192 13100 3.643320 CCTCTTGGCTCTGATACCATGTA 59.357 47.826 10.55 0.00 35.42 2.29
4193 13101 2.437281 CCTCTTGGCTCTGATACCATGT 59.563 50.000 10.55 0.00 35.42 3.21
4194 13102 2.437281 ACCTCTTGGCTCTGATACCATG 59.563 50.000 0.91 4.05 35.42 3.66
4195 13103 2.703007 GACCTCTTGGCTCTGATACCAT 59.297 50.000 0.91 0.00 35.42 3.55
4196 13104 2.111384 GACCTCTTGGCTCTGATACCA 58.889 52.381 0.00 0.00 36.63 3.25
4197 13105 2.393646 AGACCTCTTGGCTCTGATACC 58.606 52.381 0.00 0.00 36.63 2.73
4198 13106 5.128008 ACTTAAGACCTCTTGGCTCTGATAC 59.872 44.000 10.09 0.00 37.40 2.24
4199 13107 5.273208 ACTTAAGACCTCTTGGCTCTGATA 58.727 41.667 10.09 0.00 37.40 2.15
4200 13108 4.100373 ACTTAAGACCTCTTGGCTCTGAT 58.900 43.478 10.09 0.00 37.40 2.90
4201 13109 3.511477 ACTTAAGACCTCTTGGCTCTGA 58.489 45.455 10.09 0.00 37.40 3.27
4202 13110 3.971245 ACTTAAGACCTCTTGGCTCTG 57.029 47.619 10.09 0.00 37.40 3.35
4203 13111 3.904339 TCAACTTAAGACCTCTTGGCTCT 59.096 43.478 10.09 0.00 37.40 4.09
4204 13112 3.997681 GTCAACTTAAGACCTCTTGGCTC 59.002 47.826 10.09 0.00 37.40 4.70
4205 13113 4.009370 GTCAACTTAAGACCTCTTGGCT 57.991 45.455 10.09 0.00 37.40 4.75
4214 13122 1.439679 CAGCCGGGTCAACTTAAGAC 58.560 55.000 10.09 0.00 35.29 3.01
4215 13123 0.323629 CCAGCCGGGTCAACTTAAGA 59.676 55.000 10.09 0.00 0.00 2.10
4216 13124 1.305930 GCCAGCCGGGTCAACTTAAG 61.306 60.000 1.27 0.00 39.65 1.85
4217 13125 1.302993 GCCAGCCGGGTCAACTTAA 60.303 57.895 1.27 0.00 39.65 1.85
4218 13126 2.349755 GCCAGCCGGGTCAACTTA 59.650 61.111 1.27 0.00 39.65 2.24
4225 13133 3.929334 TTAATTGCGCCAGCCGGGT 62.929 57.895 4.18 0.00 44.33 5.28
4226 13134 2.219325 TTTTAATTGCGCCAGCCGGG 62.219 55.000 4.18 0.00 44.33 5.73
4227 13135 0.179113 ATTTTAATTGCGCCAGCCGG 60.179 50.000 4.18 0.00 44.33 6.13
4228 13136 1.324134 CAATTTTAATTGCGCCAGCCG 59.676 47.619 4.18 0.00 44.33 5.52
4237 13145 8.776470 ACTGAAAATGGACTGCAATTTTAATTG 58.224 29.630 10.17 10.17 46.55 2.32
4238 13146 8.907222 ACTGAAAATGGACTGCAATTTTAATT 57.093 26.923 6.77 0.00 36.40 1.40
4239 13147 7.603784 GGACTGAAAATGGACTGCAATTTTAAT 59.396 33.333 6.77 0.00 36.40 1.40
4240 13148 6.928492 GGACTGAAAATGGACTGCAATTTTAA 59.072 34.615 6.77 0.28 36.40 1.52
4241 13149 6.041409 TGGACTGAAAATGGACTGCAATTTTA 59.959 34.615 6.77 0.00 36.40 1.52
4242 13150 5.163322 TGGACTGAAAATGGACTGCAATTTT 60.163 36.000 6.54 6.54 38.39 1.82
4243 13151 4.344679 TGGACTGAAAATGGACTGCAATTT 59.655 37.500 0.00 0.00 0.00 1.82
4244 13152 3.896888 TGGACTGAAAATGGACTGCAATT 59.103 39.130 0.00 0.00 0.00 2.32
4245 13153 3.256631 GTGGACTGAAAATGGACTGCAAT 59.743 43.478 0.00 0.00 0.00 3.56
4246 13154 2.622942 GTGGACTGAAAATGGACTGCAA 59.377 45.455 0.00 0.00 0.00 4.08
4247 13155 2.229792 GTGGACTGAAAATGGACTGCA 58.770 47.619 0.00 0.00 0.00 4.41
4248 13156 1.197721 CGTGGACTGAAAATGGACTGC 59.802 52.381 0.00 0.00 0.00 4.40
4249 13157 2.494059 ACGTGGACTGAAAATGGACTG 58.506 47.619 0.00 0.00 0.00 3.51
4250 13158 2.930826 ACGTGGACTGAAAATGGACT 57.069 45.000 0.00 0.00 0.00 3.85
4251 13159 3.982576 AAACGTGGACTGAAAATGGAC 57.017 42.857 0.00 0.00 0.00 4.02
4252 13160 4.069304 CCTAAACGTGGACTGAAAATGGA 58.931 43.478 0.00 0.00 0.00 3.41
4253 13161 3.365969 GCCTAAACGTGGACTGAAAATGG 60.366 47.826 0.00 0.00 0.00 3.16
4254 13162 3.365969 GGCCTAAACGTGGACTGAAAATG 60.366 47.826 0.00 0.00 0.00 2.32
4255 13163 2.817844 GGCCTAAACGTGGACTGAAAAT 59.182 45.455 0.00 0.00 0.00 1.82
4256 13164 2.158726 AGGCCTAAACGTGGACTGAAAA 60.159 45.455 1.29 0.00 42.31 2.29
4257 13165 1.418637 AGGCCTAAACGTGGACTGAAA 59.581 47.619 1.29 0.00 42.31 2.69
4258 13166 1.053424 AGGCCTAAACGTGGACTGAA 58.947 50.000 1.29 0.00 42.31 3.02
4259 13167 2.754648 AGGCCTAAACGTGGACTGA 58.245 52.632 1.29 0.00 42.31 3.41
4261 13169 0.608640 CTCAGGCCTAAACGTGGACT 59.391 55.000 3.98 0.00 45.41 3.85
4262 13170 0.391263 CCTCAGGCCTAAACGTGGAC 60.391 60.000 3.98 0.00 0.00 4.02
4263 13171 1.550130 CCCTCAGGCCTAAACGTGGA 61.550 60.000 3.98 0.00 0.00 4.02
4264 13172 1.078426 CCCTCAGGCCTAAACGTGG 60.078 63.158 3.98 3.09 0.00 4.94
4265 13173 0.108138 CTCCCTCAGGCCTAAACGTG 60.108 60.000 3.98 0.00 0.00 4.49
4266 13174 1.900545 GCTCCCTCAGGCCTAAACGT 61.901 60.000 3.98 0.00 0.00 3.99
4267 13175 1.153349 GCTCCCTCAGGCCTAAACG 60.153 63.158 3.98 0.00 0.00 3.60
4268 13176 1.224870 GGCTCCCTCAGGCCTAAAC 59.775 63.158 3.98 0.00 44.48 2.01
4269 13177 3.741325 GGCTCCCTCAGGCCTAAA 58.259 61.111 3.98 0.00 44.48 1.85
4278 13186 4.803426 CTCACGCGTGGCTCCCTC 62.803 72.222 36.41 0.00 0.00 4.30
4281 13189 4.803426 CTCCTCACGCGTGGCTCC 62.803 72.222 36.41 0.00 0.00 4.70
4282 13190 4.803426 CCTCCTCACGCGTGGCTC 62.803 72.222 36.41 0.00 0.00 4.70
4284 13192 4.803426 CTCCTCCTCACGCGTGGC 62.803 72.222 36.41 0.00 0.00 5.01
4285 13193 3.374402 ACTCCTCCTCACGCGTGG 61.374 66.667 36.41 26.13 0.00 4.94
4286 13194 2.126307 CACTCCTCCTCACGCGTG 60.126 66.667 32.76 32.76 0.00 5.34
4287 13195 2.201022 AACACTCCTCCTCACGCGT 61.201 57.895 5.58 5.58 0.00 6.01
4288 13196 1.734477 CAACACTCCTCCTCACGCG 60.734 63.158 3.53 3.53 0.00 6.01
4289 13197 0.667792 GTCAACACTCCTCCTCACGC 60.668 60.000 0.00 0.00 0.00 5.34
4290 13198 0.387367 CGTCAACACTCCTCCTCACG 60.387 60.000 0.00 0.00 0.00 4.35
4291 13199 0.674534 ACGTCAACACTCCTCCTCAC 59.325 55.000 0.00 0.00 0.00 3.51
4292 13200 2.281539 TACGTCAACACTCCTCCTCA 57.718 50.000 0.00 0.00 0.00 3.86
4293 13201 4.978083 TTATACGTCAACACTCCTCCTC 57.022 45.455 0.00 0.00 0.00 3.71
4294 13202 4.710375 ACATTATACGTCAACACTCCTCCT 59.290 41.667 0.00 0.00 0.00 3.69
4295 13203 4.804139 CACATTATACGTCAACACTCCTCC 59.196 45.833 0.00 0.00 0.00 4.30
4296 13204 4.267928 GCACATTATACGTCAACACTCCTC 59.732 45.833 0.00 0.00 0.00 3.71
4297 13205 4.081642 AGCACATTATACGTCAACACTCCT 60.082 41.667 0.00 0.00 0.00 3.69
4298 13206 4.032900 CAGCACATTATACGTCAACACTCC 59.967 45.833 0.00 0.00 0.00 3.85
4299 13207 4.492570 GCAGCACATTATACGTCAACACTC 60.493 45.833 0.00 0.00 0.00 3.51
4300 13208 3.370978 GCAGCACATTATACGTCAACACT 59.629 43.478 0.00 0.00 0.00 3.55
4301 13209 3.485216 GGCAGCACATTATACGTCAACAC 60.485 47.826 0.00 0.00 0.00 3.32
4302 13210 2.675844 GGCAGCACATTATACGTCAACA 59.324 45.455 0.00 0.00 0.00 3.33
4303 13211 2.936498 AGGCAGCACATTATACGTCAAC 59.064 45.455 0.00 0.00 0.00 3.18
4304 13212 3.260475 AGGCAGCACATTATACGTCAA 57.740 42.857 0.00 0.00 0.00 3.18
4305 13213 2.979814 AGGCAGCACATTATACGTCA 57.020 45.000 0.00 0.00 0.00 4.35
4306 13214 3.978687 ACTAGGCAGCACATTATACGTC 58.021 45.455 0.00 0.00 0.00 4.34
4307 13215 3.637229 AGACTAGGCAGCACATTATACGT 59.363 43.478 0.00 0.00 0.00 3.57
4308 13216 4.022762 AGAGACTAGGCAGCACATTATACG 60.023 45.833 0.00 0.00 0.00 3.06
4309 13217 5.461032 AGAGACTAGGCAGCACATTATAC 57.539 43.478 0.00 0.00 0.00 1.47
4310 13218 5.011125 GGAAGAGACTAGGCAGCACATTATA 59.989 44.000 0.00 0.00 0.00 0.98
4311 13219 4.202305 GGAAGAGACTAGGCAGCACATTAT 60.202 45.833 0.00 0.00 0.00 1.28
4312 13220 3.133003 GGAAGAGACTAGGCAGCACATTA 59.867 47.826 0.00 0.00 0.00 1.90
4313 13221 2.093235 GGAAGAGACTAGGCAGCACATT 60.093 50.000 0.00 0.00 0.00 2.71
4314 13222 1.484240 GGAAGAGACTAGGCAGCACAT 59.516 52.381 0.00 0.00 0.00 3.21
4315 13223 0.898320 GGAAGAGACTAGGCAGCACA 59.102 55.000 0.00 0.00 0.00 4.57
4316 13224 0.898320 TGGAAGAGACTAGGCAGCAC 59.102 55.000 0.00 0.00 0.00 4.40
4317 13225 1.759445 GATGGAAGAGACTAGGCAGCA 59.241 52.381 0.00 0.00 0.00 4.41
4318 13226 1.759445 TGATGGAAGAGACTAGGCAGC 59.241 52.381 0.00 0.00 0.00 5.25
4319 13227 3.295093 TCTGATGGAAGAGACTAGGCAG 58.705 50.000 0.00 0.00 0.00 4.85
4320 13228 3.388552 TCTGATGGAAGAGACTAGGCA 57.611 47.619 0.00 0.00 0.00 4.75
4321 13229 3.057596 CGATCTGATGGAAGAGACTAGGC 60.058 52.174 0.00 0.00 0.00 3.93
4322 13230 3.505680 CCGATCTGATGGAAGAGACTAGG 59.494 52.174 0.83 0.00 0.00 3.02
4323 13231 4.141287 ACCGATCTGATGGAAGAGACTAG 58.859 47.826 11.46 0.00 0.00 2.57
4324 13232 4.138290 GACCGATCTGATGGAAGAGACTA 58.862 47.826 11.46 0.00 0.00 2.59
4325 13233 2.955660 GACCGATCTGATGGAAGAGACT 59.044 50.000 11.46 0.00 0.00 3.24
4326 13234 2.955660 AGACCGATCTGATGGAAGAGAC 59.044 50.000 11.46 0.00 32.29 3.36
4327 13235 3.304911 AGACCGATCTGATGGAAGAGA 57.695 47.619 11.46 0.00 32.29 3.10
4328 13236 4.399004 AAAGACCGATCTGATGGAAGAG 57.601 45.455 11.46 0.00 34.48 2.85
4329 13237 4.507710 CAAAAGACCGATCTGATGGAAGA 58.492 43.478 11.46 0.00 34.48 2.87
4330 13238 3.624861 CCAAAAGACCGATCTGATGGAAG 59.375 47.826 5.34 0.00 34.48 3.46
4331 13239 3.009033 ACCAAAAGACCGATCTGATGGAA 59.991 43.478 16.17 0.00 34.48 3.53
4332 13240 2.571653 ACCAAAAGACCGATCTGATGGA 59.428 45.455 16.17 0.00 34.48 3.41
4333 13241 2.991250 ACCAAAAGACCGATCTGATGG 58.009 47.619 9.14 9.14 34.48 3.51
4334 13242 3.426695 GCAACCAAAAGACCGATCTGATG 60.427 47.826 0.00 0.00 34.48 3.07
4335 13243 2.749621 GCAACCAAAAGACCGATCTGAT 59.250 45.455 0.00 0.00 34.48 2.90
4336 13244 2.151202 GCAACCAAAAGACCGATCTGA 58.849 47.619 0.00 0.00 34.48 3.27
4337 13245 1.879380 TGCAACCAAAAGACCGATCTG 59.121 47.619 0.00 0.00 34.48 2.90
4338 13246 2.270352 TGCAACCAAAAGACCGATCT 57.730 45.000 0.00 0.00 36.42 2.75
4339 13247 3.244976 CAATGCAACCAAAAGACCGATC 58.755 45.455 0.00 0.00 0.00 3.69
4340 13248 2.029110 CCAATGCAACCAAAAGACCGAT 60.029 45.455 0.00 0.00 0.00 4.18
4341 13249 1.339610 CCAATGCAACCAAAAGACCGA 59.660 47.619 0.00 0.00 0.00 4.69
4342 13250 1.782044 CCAATGCAACCAAAAGACCG 58.218 50.000 0.00 0.00 0.00 4.79
4343 13251 1.070601 AGCCAATGCAACCAAAAGACC 59.929 47.619 0.00 0.00 41.13 3.85
4344 13252 2.531522 AGCCAATGCAACCAAAAGAC 57.468 45.000 0.00 0.00 41.13 3.01
4345 13253 3.495331 TCTAGCCAATGCAACCAAAAGA 58.505 40.909 0.00 0.00 41.13 2.52
4346 13254 3.841643 CTCTAGCCAATGCAACCAAAAG 58.158 45.455 0.00 0.00 41.13 2.27
4347 13255 2.029110 GCTCTAGCCAATGCAACCAAAA 60.029 45.455 0.00 0.00 41.13 2.44
4348 13256 1.545582 GCTCTAGCCAATGCAACCAAA 59.454 47.619 0.00 0.00 41.13 3.28
4349 13257 1.176527 GCTCTAGCCAATGCAACCAA 58.823 50.000 0.00 0.00 41.13 3.67
4350 13258 0.038021 TGCTCTAGCCAATGCAACCA 59.962 50.000 0.00 0.00 41.13 3.67
4351 13259 1.066605 CATGCTCTAGCCAATGCAACC 59.933 52.381 0.00 0.00 41.13 3.77
4352 13260 1.535437 GCATGCTCTAGCCAATGCAAC 60.535 52.381 11.37 2.38 44.74 4.17
4353 13261 0.742505 GCATGCTCTAGCCAATGCAA 59.257 50.000 11.37 0.00 44.74 4.08
4354 13262 2.411535 GCATGCTCTAGCCAATGCA 58.588 52.632 11.37 0.00 44.74 3.96
4355 13263 0.030369 GTGCATGCTCTAGCCAATGC 59.970 55.000 20.33 16.33 45.25 3.56
4356 13264 1.676746 AGTGCATGCTCTAGCCAATG 58.323 50.000 20.22 0.00 41.18 2.82
4357 13265 2.092538 AGAAGTGCATGCTCTAGCCAAT 60.093 45.455 21.70 5.92 41.18 3.16
4358 13266 1.280133 AGAAGTGCATGCTCTAGCCAA 59.720 47.619 21.70 0.00 41.18 4.52
4359 13267 0.907486 AGAAGTGCATGCTCTAGCCA 59.093 50.000 21.70 0.00 41.18 4.75
4360 13268 2.159043 TGTAGAAGTGCATGCTCTAGCC 60.159 50.000 21.70 13.81 41.18 3.93
4361 13269 3.122297 CTGTAGAAGTGCATGCTCTAGC 58.878 50.000 21.70 16.29 42.50 3.42
4362 13270 3.122297 GCTGTAGAAGTGCATGCTCTAG 58.878 50.000 21.70 15.54 0.00 2.43
4363 13271 2.480244 CGCTGTAGAAGTGCATGCTCTA 60.480 50.000 21.70 15.62 0.00 2.43
4364 13272 1.738365 CGCTGTAGAAGTGCATGCTCT 60.738 52.381 20.33 18.23 0.00 4.09
4365 13273 0.649475 CGCTGTAGAAGTGCATGCTC 59.351 55.000 20.33 15.94 0.00 4.26
4366 13274 0.036952 ACGCTGTAGAAGTGCATGCT 60.037 50.000 20.33 0.00 40.28 3.79
4367 13275 0.371645 GACGCTGTAGAAGTGCATGC 59.628 55.000 11.82 11.82 40.28 4.06
4368 13276 1.002366 GGACGCTGTAGAAGTGCATG 58.998 55.000 0.00 0.00 40.28 4.06
4369 13277 0.608130 TGGACGCTGTAGAAGTGCAT 59.392 50.000 0.00 0.00 40.28 3.96
4370 13278 0.608130 ATGGACGCTGTAGAAGTGCA 59.392 50.000 5.10 5.10 40.28 4.57
4371 13279 1.002366 CATGGACGCTGTAGAAGTGC 58.998 55.000 0.00 0.00 40.28 4.40
4372 13280 1.645034 CCATGGACGCTGTAGAAGTG 58.355 55.000 5.56 0.00 42.48 3.16
4373 13281 0.108138 GCCATGGACGCTGTAGAAGT 60.108 55.000 18.40 0.00 0.00 3.01
4374 13282 1.148157 CGCCATGGACGCTGTAGAAG 61.148 60.000 18.40 0.00 0.00 2.85
4375 13283 1.153647 CGCCATGGACGCTGTAGAA 60.154 57.895 18.40 0.00 0.00 2.10
4376 13284 2.494445 CGCCATGGACGCTGTAGA 59.506 61.111 18.40 0.00 0.00 2.59
4527 13436 0.908910 TGAGGTGTGACAGTGTTGGT 59.091 50.000 0.00 0.00 0.00 3.67
4531 13440 1.336887 GCGTATGAGGTGTGACAGTGT 60.337 52.381 0.00 0.00 0.00 3.55
4561 13476 7.106239 AGGAATATAAATTATCCTGACAGGCG 58.894 38.462 17.33 0.00 40.73 5.52
4593 13511 3.889134 CTCTGTGCGGCCTGAAGCA 62.889 63.158 0.00 0.00 46.50 3.91
4604 13522 1.740025 GGGTGCAGTATTTCTCTGTGC 59.260 52.381 0.00 0.00 35.60 4.57
4610 13528 1.985159 TCCTGTGGGTGCAGTATTTCT 59.015 47.619 0.00 0.00 34.84 2.52
4640 13559 0.804989 GGTGCATGCACTACCAGAAC 59.195 55.000 40.86 23.30 45.52 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.