Multiple sequence alignment - TraesCS6B01G377700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G377700 chr6B 100.000 2567 0 0 1 2567 652944338 652946904 0.000000e+00 4741.0
1 TraesCS6B01G377700 chr6B 95.152 330 12 2 1 328 21063722 21064049 3.790000e-143 518.0
2 TraesCS6B01G377700 chr6B 73.913 414 74 28 1157 1565 652983780 652984164 4.460000e-28 135.0
3 TraesCS6B01G377700 chr6D 90.496 1452 111 16 531 1974 432823393 432824825 0.000000e+00 1892.0
4 TraesCS6B01G377700 chr6D 91.049 324 27 2 1975 2297 432824871 432825193 1.090000e-118 436.0
5 TraesCS6B01G377700 chr6D 93.421 152 9 1 2358 2508 432825336 432825487 9.240000e-55 224.0
6 TraesCS6B01G377700 chr6D 74.396 414 72 31 1157 1565 432852866 432853250 2.060000e-31 147.0
7 TraesCS6B01G377700 chr6A 91.795 1365 81 16 531 1889 578941755 578943094 0.000000e+00 1871.0
8 TraesCS6B01G377700 chr6A 73.913 414 74 30 1157 1565 578954863 578955247 4.460000e-28 135.0
9 TraesCS6B01G377700 chr1B 95.468 331 10 2 1 328 269218586 269218258 8.140000e-145 523.0
10 TraesCS6B01G377700 chr1B 94.880 332 14 2 1 331 25227435 25227106 1.360000e-142 516.0
11 TraesCS6B01G377700 chr1B 94.277 332 16 2 1 331 390272797 390273126 2.950000e-139 505.0
12 TraesCS6B01G377700 chr3B 95.427 328 13 1 1 328 20170039 20169714 2.930000e-144 521.0
13 TraesCS6B01G377700 chr2B 95.925 319 11 1 1 319 659017969 659017653 1.360000e-142 516.0
14 TraesCS6B01G377700 chr2B 94.848 330 13 2 1 328 156589126 156589453 1.760000e-141 512.0
15 TraesCS6B01G377700 chr7B 94.048 336 17 2 1 336 15824078 15824410 8.200000e-140 507.0
16 TraesCS6B01G377700 chr5B 94.294 333 16 2 1 332 699778690 699778360 8.200000e-140 507.0
17 TraesCS6B01G377700 chr5B 93.294 343 18 4 1 341 548557233 548556894 3.810000e-138 501.0
18 TraesCS6B01G377700 chr5B 85.915 142 17 3 329 467 428579681 428579540 5.720000e-32 148.0
19 TraesCS6B01G377700 chr2D 89.130 138 13 2 329 464 608922313 608922450 1.220000e-38 171.0
20 TraesCS6B01G377700 chr7A 87.050 139 14 4 329 464 669666480 669666617 1.230000e-33 154.0
21 TraesCS6B01G377700 chr4A 86.957 138 16 2 329 464 674616931 674616794 1.230000e-33 154.0
22 TraesCS6B01G377700 chr4A 85.816 141 18 2 329 467 25079374 25079234 5.720000e-32 148.0
23 TraesCS6B01G377700 chr1D 86.957 138 16 2 329 464 422067002 422066865 1.230000e-33 154.0
24 TraesCS6B01G377700 chr1D 86.525 141 16 3 329 467 11958541 11958402 4.420000e-33 152.0
25 TraesCS6B01G377700 chr3D 86.957 138 15 3 329 464 305497288 305497152 4.420000e-33 152.0
26 TraesCS6B01G377700 chr1A 86.331 139 15 4 329 464 539684137 539684000 5.720000e-32 148.0
27 TraesCS6B01G377700 chr4D 100.000 28 0 0 2233 2260 407125155 407125128 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G377700 chr6B 652944338 652946904 2566 False 4741.000000 4741 100.000000 1 2567 1 chr6B.!!$F2 2566
1 TraesCS6B01G377700 chr6D 432823393 432825487 2094 False 850.666667 1892 91.655333 531 2508 3 chr6D.!!$F2 1977
2 TraesCS6B01G377700 chr6A 578941755 578943094 1339 False 1871.000000 1871 91.795000 531 1889 1 chr6A.!!$F1 1358

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
98 99 0.0293 CAGCGGTTGTTGTGTTCTGG 59.971 55.0 0.0 0.0 0.0 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1591 1600 0.041576 GTTTTCCCTCACGAACGTGC 60.042 55.0 20.24 0.0 45.04 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 2.126812 GCTCGTCGCTGTTCGTCT 60.127 61.111 0.00 0.00 39.67 4.18
26 27 1.134075 GCTCGTCGCTGTTCGTCTA 59.866 57.895 0.00 0.00 39.67 2.59
27 28 1.126996 GCTCGTCGCTGTTCGTCTAC 61.127 60.000 0.00 0.00 39.67 2.59
28 29 0.852412 CTCGTCGCTGTTCGTCTACG 60.852 60.000 0.00 0.00 37.30 3.51
29 30 1.154525 CGTCGCTGTTCGTCTACGT 60.155 57.895 2.02 0.00 40.80 3.57
30 31 0.723790 CGTCGCTGTTCGTCTACGTT 60.724 55.000 0.00 0.00 40.80 3.99
31 32 0.973423 GTCGCTGTTCGTCTACGTTC 59.027 55.000 0.00 0.00 40.80 3.95
32 33 0.451628 TCGCTGTTCGTCTACGTTCG 60.452 55.000 0.00 0.00 40.80 3.95
33 34 0.723790 CGCTGTTCGTCTACGTTCGT 60.724 55.000 0.00 2.91 40.80 3.85
34 35 0.701303 GCTGTTCGTCTACGTTCGTG 59.299 55.000 8.14 0.00 40.80 4.35
35 36 1.923316 GCTGTTCGTCTACGTTCGTGT 60.923 52.381 8.14 0.00 40.80 4.49
36 37 1.707117 CTGTTCGTCTACGTTCGTGTG 59.293 52.381 8.14 1.60 40.80 3.82
37 38 1.063912 TGTTCGTCTACGTTCGTGTGT 59.936 47.619 8.14 0.00 40.80 3.72
38 39 1.705559 GTTCGTCTACGTTCGTGTGTC 59.294 52.381 8.14 0.00 40.80 3.67
39 40 1.220529 TCGTCTACGTTCGTGTGTCT 58.779 50.000 8.14 0.00 40.80 3.41
40 41 1.599071 TCGTCTACGTTCGTGTGTCTT 59.401 47.619 8.14 0.00 40.80 3.01
41 42 1.967908 CGTCTACGTTCGTGTGTCTTC 59.032 52.381 8.14 0.00 34.11 2.87
42 43 1.967908 GTCTACGTTCGTGTGTCTTCG 59.032 52.381 8.14 0.00 0.00 3.79
43 44 1.866601 TCTACGTTCGTGTGTCTTCGA 59.133 47.619 8.14 0.00 0.00 3.71
44 45 2.481568 TCTACGTTCGTGTGTCTTCGAT 59.518 45.455 8.14 0.00 36.01 3.59
45 46 2.129823 ACGTTCGTGTGTCTTCGATT 57.870 45.000 0.00 0.00 36.01 3.34
46 47 2.466846 ACGTTCGTGTGTCTTCGATTT 58.533 42.857 0.00 0.00 36.01 2.17
47 48 2.217847 ACGTTCGTGTGTCTTCGATTTG 59.782 45.455 0.00 0.00 36.01 2.32
48 49 2.409752 CGTTCGTGTGTCTTCGATTTGG 60.410 50.000 0.00 0.00 36.01 3.28
49 50 2.798283 GTTCGTGTGTCTTCGATTTGGA 59.202 45.455 0.00 0.00 36.01 3.53
50 51 3.313012 TCGTGTGTCTTCGATTTGGAT 57.687 42.857 0.00 0.00 0.00 3.41
51 52 3.250744 TCGTGTGTCTTCGATTTGGATC 58.749 45.455 0.00 0.00 0.00 3.36
52 53 2.348666 CGTGTGTCTTCGATTTGGATCC 59.651 50.000 4.20 4.20 0.00 3.36
53 54 3.600388 GTGTGTCTTCGATTTGGATCCT 58.400 45.455 14.23 0.00 0.00 3.24
54 55 4.003648 GTGTGTCTTCGATTTGGATCCTT 58.996 43.478 14.23 0.00 0.00 3.36
55 56 4.093556 GTGTGTCTTCGATTTGGATCCTTC 59.906 45.833 14.23 6.58 0.00 3.46
56 57 3.623510 GTGTCTTCGATTTGGATCCTTCC 59.376 47.826 14.23 0.00 42.94 3.46
57 58 2.866762 GTCTTCGATTTGGATCCTTCCG 59.133 50.000 14.23 11.14 45.89 4.30
58 59 2.764010 TCTTCGATTTGGATCCTTCCGA 59.236 45.455 14.23 13.22 45.89 4.55
59 60 3.388024 TCTTCGATTTGGATCCTTCCGAT 59.612 43.478 14.23 0.00 45.89 4.18
60 61 3.386768 TCGATTTGGATCCTTCCGATC 57.613 47.619 14.23 8.05 45.89 3.69
61 62 2.965831 TCGATTTGGATCCTTCCGATCT 59.034 45.455 14.23 0.00 45.90 2.75
62 63 4.149598 TCGATTTGGATCCTTCCGATCTA 58.850 43.478 14.23 0.00 45.90 1.98
63 64 4.022242 TCGATTTGGATCCTTCCGATCTAC 60.022 45.833 14.23 0.00 45.90 2.59
64 65 3.728076 TTTGGATCCTTCCGATCTACG 57.272 47.619 14.23 0.00 45.90 3.51
65 66 0.959553 TGGATCCTTCCGATCTACGC 59.040 55.000 14.23 0.00 45.90 4.42
66 67 1.249407 GGATCCTTCCGATCTACGCT 58.751 55.000 3.84 0.00 45.90 5.07
67 68 2.224695 TGGATCCTTCCGATCTACGCTA 60.225 50.000 14.23 0.00 45.90 4.26
68 69 3.018149 GGATCCTTCCGATCTACGCTAT 58.982 50.000 3.84 0.00 45.90 2.97
69 70 3.444388 GGATCCTTCCGATCTACGCTATT 59.556 47.826 3.84 0.00 45.90 1.73
70 71 4.082136 GGATCCTTCCGATCTACGCTATTT 60.082 45.833 3.84 0.00 45.90 1.40
71 72 4.931661 TCCTTCCGATCTACGCTATTTT 57.068 40.909 0.00 0.00 41.07 1.82
72 73 5.272283 TCCTTCCGATCTACGCTATTTTT 57.728 39.130 0.00 0.00 41.07 1.94
73 74 5.287226 TCCTTCCGATCTACGCTATTTTTC 58.713 41.667 0.00 0.00 41.07 2.29
74 75 5.047847 CCTTCCGATCTACGCTATTTTTCA 58.952 41.667 0.00 0.00 41.07 2.69
75 76 5.696724 CCTTCCGATCTACGCTATTTTTCAT 59.303 40.000 0.00 0.00 41.07 2.57
76 77 6.128795 CCTTCCGATCTACGCTATTTTTCATC 60.129 42.308 0.00 0.00 41.07 2.92
77 78 4.915667 TCCGATCTACGCTATTTTTCATCG 59.084 41.667 0.00 0.00 41.07 3.84
78 79 4.090066 CCGATCTACGCTATTTTTCATCGG 59.910 45.833 2.86 2.86 43.93 4.18
79 80 4.433022 CGATCTACGCTATTTTTCATCGGC 60.433 45.833 0.00 0.00 34.51 5.54
80 81 3.787785 TCTACGCTATTTTTCATCGGCA 58.212 40.909 0.00 0.00 0.00 5.69
81 82 3.802139 TCTACGCTATTTTTCATCGGCAG 59.198 43.478 0.00 0.00 0.00 4.85
82 83 1.064060 ACGCTATTTTTCATCGGCAGC 59.936 47.619 0.00 0.00 0.00 5.25
83 84 1.746760 GCTATTTTTCATCGGCAGCG 58.253 50.000 0.00 0.00 0.00 5.18
84 85 1.597937 GCTATTTTTCATCGGCAGCGG 60.598 52.381 0.00 0.00 0.00 5.52
85 86 1.670811 CTATTTTTCATCGGCAGCGGT 59.329 47.619 0.00 0.00 0.00 5.68
86 87 0.887933 ATTTTTCATCGGCAGCGGTT 59.112 45.000 0.00 0.00 0.00 4.44
87 88 0.039617 TTTTTCATCGGCAGCGGTTG 60.040 50.000 4.94 4.94 0.00 3.77
88 89 1.169661 TTTTCATCGGCAGCGGTTGT 61.170 50.000 10.02 0.00 0.00 3.32
89 90 1.169661 TTTCATCGGCAGCGGTTGTT 61.170 50.000 10.02 0.00 0.00 2.83
90 91 1.851021 TTCATCGGCAGCGGTTGTTG 61.851 55.000 10.02 1.39 0.00 3.33
91 92 2.281484 ATCGGCAGCGGTTGTTGT 60.281 55.556 0.00 0.00 0.00 3.32
92 93 2.616330 ATCGGCAGCGGTTGTTGTG 61.616 57.895 0.00 0.00 0.00 3.33
93 94 3.582120 CGGCAGCGGTTGTTGTGT 61.582 61.111 0.00 0.00 0.00 3.72
94 95 2.804856 GGCAGCGGTTGTTGTGTT 59.195 55.556 0.00 0.00 0.00 3.32
95 96 1.299089 GGCAGCGGTTGTTGTGTTC 60.299 57.895 0.00 0.00 0.00 3.18
96 97 1.724582 GGCAGCGGTTGTTGTGTTCT 61.725 55.000 0.00 0.00 0.00 3.01
97 98 0.592247 GCAGCGGTTGTTGTGTTCTG 60.592 55.000 0.00 0.00 0.00 3.02
98 99 0.029300 CAGCGGTTGTTGTGTTCTGG 59.971 55.000 0.00 0.00 0.00 3.86
99 100 1.101049 AGCGGTTGTTGTGTTCTGGG 61.101 55.000 0.00 0.00 0.00 4.45
100 101 2.029743 CGGTTGTTGTGTTCTGGGG 58.970 57.895 0.00 0.00 0.00 4.96
101 102 0.750182 CGGTTGTTGTGTTCTGGGGT 60.750 55.000 0.00 0.00 0.00 4.95
102 103 0.744281 GGTTGTTGTGTTCTGGGGTG 59.256 55.000 0.00 0.00 0.00 4.61
103 104 0.102300 GTTGTTGTGTTCTGGGGTGC 59.898 55.000 0.00 0.00 0.00 5.01
104 105 0.033601 TTGTTGTGTTCTGGGGTGCT 60.034 50.000 0.00 0.00 0.00 4.40
105 106 0.751277 TGTTGTGTTCTGGGGTGCTG 60.751 55.000 0.00 0.00 0.00 4.41
106 107 1.152777 TTGTGTTCTGGGGTGCTGG 60.153 57.895 0.00 0.00 0.00 4.85
107 108 1.932156 TTGTGTTCTGGGGTGCTGGT 61.932 55.000 0.00 0.00 0.00 4.00
108 109 1.600916 GTGTTCTGGGGTGCTGGTC 60.601 63.158 0.00 0.00 0.00 4.02
109 110 2.034221 GTTCTGGGGTGCTGGTCC 59.966 66.667 0.00 0.00 0.00 4.46
110 111 2.121963 TTCTGGGGTGCTGGTCCT 60.122 61.111 0.00 0.00 0.00 3.85
111 112 1.159905 TTCTGGGGTGCTGGTCCTA 59.840 57.895 0.00 0.00 0.00 2.94
112 113 0.253160 TTCTGGGGTGCTGGTCCTAT 60.253 55.000 0.00 0.00 0.00 2.57
113 114 0.982852 TCTGGGGTGCTGGTCCTATG 60.983 60.000 0.00 0.00 0.00 2.23
114 115 1.987807 CTGGGGTGCTGGTCCTATGG 61.988 65.000 0.00 0.00 0.00 2.74
115 116 2.757124 GGGGTGCTGGTCCTATGGG 61.757 68.421 0.00 0.00 0.00 4.00
116 117 2.757124 GGGTGCTGGTCCTATGGGG 61.757 68.421 0.00 0.00 0.00 4.96
117 118 2.001269 GGTGCTGGTCCTATGGGGT 61.001 63.158 0.00 0.00 36.25 4.95
118 119 1.527370 GTGCTGGTCCTATGGGGTC 59.473 63.158 0.00 0.00 36.25 4.46
119 120 0.983378 GTGCTGGTCCTATGGGGTCT 60.983 60.000 0.00 0.00 36.25 3.85
120 121 0.253160 TGCTGGTCCTATGGGGTCTT 60.253 55.000 0.00 0.00 36.25 3.01
121 122 1.009060 TGCTGGTCCTATGGGGTCTTA 59.991 52.381 0.00 0.00 36.25 2.10
122 123 1.694696 GCTGGTCCTATGGGGTCTTAG 59.305 57.143 0.00 0.00 36.25 2.18
123 124 1.694696 CTGGTCCTATGGGGTCTTAGC 59.305 57.143 0.00 0.00 36.25 3.09
124 125 1.009060 TGGTCCTATGGGGTCTTAGCA 59.991 52.381 0.00 0.00 36.25 3.49
125 126 1.416772 GGTCCTATGGGGTCTTAGCAC 59.583 57.143 0.00 0.00 36.25 4.40
126 127 1.068741 GTCCTATGGGGTCTTAGCACG 59.931 57.143 0.00 0.00 36.25 5.34
127 128 1.063492 TCCTATGGGGTCTTAGCACGA 60.063 52.381 0.00 0.00 36.25 4.35
128 129 1.971357 CCTATGGGGTCTTAGCACGAT 59.029 52.381 0.00 0.00 0.00 3.73
129 130 2.289072 CCTATGGGGTCTTAGCACGATG 60.289 54.545 0.00 0.00 0.00 3.84
130 131 1.496060 ATGGGGTCTTAGCACGATGA 58.504 50.000 0.00 0.00 0.00 2.92
131 132 0.535335 TGGGGTCTTAGCACGATGAC 59.465 55.000 0.00 0.00 0.00 3.06
132 133 0.824759 GGGGTCTTAGCACGATGACT 59.175 55.000 0.00 0.00 0.00 3.41
133 134 1.207329 GGGGTCTTAGCACGATGACTT 59.793 52.381 0.00 0.00 0.00 3.01
134 135 2.541556 GGGTCTTAGCACGATGACTTC 58.458 52.381 0.00 0.00 0.00 3.01
135 136 2.541556 GGTCTTAGCACGATGACTTCC 58.458 52.381 0.00 0.00 0.00 3.46
136 137 2.166664 GGTCTTAGCACGATGACTTCCT 59.833 50.000 0.00 0.00 0.00 3.36
137 138 3.182967 GTCTTAGCACGATGACTTCCTG 58.817 50.000 0.00 0.00 0.00 3.86
138 139 3.089284 TCTTAGCACGATGACTTCCTGA 58.911 45.455 0.00 0.00 0.00 3.86
139 140 2.941453 TAGCACGATGACTTCCTGAC 57.059 50.000 0.00 0.00 0.00 3.51
140 141 1.261480 AGCACGATGACTTCCTGACT 58.739 50.000 0.00 0.00 0.00 3.41
141 142 1.067283 AGCACGATGACTTCCTGACTG 60.067 52.381 0.00 0.00 0.00 3.51
142 143 1.337260 GCACGATGACTTCCTGACTGT 60.337 52.381 0.00 0.00 0.00 3.55
143 144 2.600731 CACGATGACTTCCTGACTGTC 58.399 52.381 0.00 0.00 0.00 3.51
144 145 2.230025 CACGATGACTTCCTGACTGTCT 59.770 50.000 9.51 0.00 0.00 3.41
145 146 3.440522 CACGATGACTTCCTGACTGTCTA 59.559 47.826 9.51 0.00 0.00 2.59
146 147 3.440872 ACGATGACTTCCTGACTGTCTAC 59.559 47.826 9.51 0.00 0.00 2.59
147 148 3.692101 CGATGACTTCCTGACTGTCTACT 59.308 47.826 9.51 0.00 0.00 2.57
148 149 4.876679 CGATGACTTCCTGACTGTCTACTA 59.123 45.833 9.51 0.00 0.00 1.82
149 150 5.220700 CGATGACTTCCTGACTGTCTACTAC 60.221 48.000 9.51 0.00 0.00 2.73
150 151 4.981812 TGACTTCCTGACTGTCTACTACA 58.018 43.478 9.51 0.00 36.42 2.74
151 152 5.382616 TGACTTCCTGACTGTCTACTACAA 58.617 41.667 9.51 0.00 37.74 2.41
152 153 5.241064 TGACTTCCTGACTGTCTACTACAAC 59.759 44.000 9.51 0.00 37.74 3.32
153 154 5.138276 ACTTCCTGACTGTCTACTACAACA 58.862 41.667 9.51 0.00 37.74 3.33
154 155 5.597182 ACTTCCTGACTGTCTACTACAACAA 59.403 40.000 9.51 0.00 37.74 2.83
155 156 5.707242 TCCTGACTGTCTACTACAACAAG 57.293 43.478 9.51 0.00 37.74 3.16
156 157 5.138276 TCCTGACTGTCTACTACAACAAGT 58.862 41.667 9.51 0.00 37.74 3.16
157 158 5.597182 TCCTGACTGTCTACTACAACAAGTT 59.403 40.000 9.51 0.00 37.74 2.66
158 159 5.692204 CCTGACTGTCTACTACAACAAGTTG 59.308 44.000 11.16 11.16 45.58 3.16
166 167 2.027460 CAACAAGTTGTGCCCGGC 59.973 61.111 9.79 1.04 35.92 6.13
167 168 2.123897 AACAAGTTGTGCCCGGCT 60.124 55.556 9.79 0.00 0.00 5.52
168 169 2.193536 AACAAGTTGTGCCCGGCTC 61.194 57.895 9.79 7.85 0.00 4.70
169 170 3.365265 CAAGTTGTGCCCGGCTCC 61.365 66.667 11.61 1.66 0.00 4.70
187 188 4.996434 GGCGATGGAGGGGCGATG 62.996 72.222 0.00 0.00 0.00 3.84
188 189 3.928779 GCGATGGAGGGGCGATGA 61.929 66.667 0.00 0.00 0.00 2.92
189 190 2.029666 CGATGGAGGGGCGATGAC 59.970 66.667 0.00 0.00 0.00 3.06
190 191 2.029666 GATGGAGGGGCGATGACG 59.970 66.667 0.00 0.00 42.93 4.35
191 192 3.521529 GATGGAGGGGCGATGACGG 62.522 68.421 0.00 0.00 40.15 4.79
216 217 4.436998 CCTTCGGCTCGCTTCGGT 62.437 66.667 0.00 0.00 0.00 4.69
217 218 3.181967 CTTCGGCTCGCTTCGGTG 61.182 66.667 0.00 0.00 0.00 4.94
221 222 3.793144 GGCTCGCTTCGGTGCTTG 61.793 66.667 0.00 0.00 0.00 4.01
222 223 3.044305 GCTCGCTTCGGTGCTTGT 61.044 61.111 0.00 0.00 0.00 3.16
223 224 1.736645 GCTCGCTTCGGTGCTTGTA 60.737 57.895 0.00 0.00 0.00 2.41
224 225 1.687494 GCTCGCTTCGGTGCTTGTAG 61.687 60.000 0.00 0.00 0.00 2.74
225 226 0.388649 CTCGCTTCGGTGCTTGTAGT 60.389 55.000 0.00 0.00 0.00 2.73
226 227 0.388134 TCGCTTCGGTGCTTGTAGTC 60.388 55.000 0.00 0.00 0.00 2.59
227 228 1.674611 CGCTTCGGTGCTTGTAGTCG 61.675 60.000 0.00 0.00 0.00 4.18
228 229 0.666577 GCTTCGGTGCTTGTAGTCGT 60.667 55.000 0.00 0.00 0.00 4.34
229 230 1.337821 CTTCGGTGCTTGTAGTCGTC 58.662 55.000 0.00 0.00 0.00 4.20
230 231 0.386352 TTCGGTGCTTGTAGTCGTCG 60.386 55.000 0.00 0.00 0.00 5.12
231 232 2.434134 CGGTGCTTGTAGTCGTCGC 61.434 63.158 0.00 0.00 0.00 5.19
232 233 1.080705 GGTGCTTGTAGTCGTCGCT 60.081 57.895 0.00 0.00 0.00 4.93
233 234 0.169672 GGTGCTTGTAGTCGTCGCTA 59.830 55.000 0.00 0.00 0.00 4.26
234 235 1.536149 GTGCTTGTAGTCGTCGCTAG 58.464 55.000 0.00 0.00 0.00 3.42
235 236 0.450583 TGCTTGTAGTCGTCGCTAGG 59.549 55.000 0.00 0.00 0.00 3.02
236 237 0.450983 GCTTGTAGTCGTCGCTAGGT 59.549 55.000 0.00 0.00 0.00 3.08
237 238 1.794437 GCTTGTAGTCGTCGCTAGGTG 60.794 57.143 0.00 0.00 0.00 4.00
238 239 0.806868 TTGTAGTCGTCGCTAGGTGG 59.193 55.000 0.00 0.00 0.00 4.61
239 240 0.321919 TGTAGTCGTCGCTAGGTGGT 60.322 55.000 0.00 0.00 0.00 4.16
240 241 0.376502 GTAGTCGTCGCTAGGTGGTC 59.623 60.000 0.00 0.00 0.00 4.02
241 242 0.251354 TAGTCGTCGCTAGGTGGTCT 59.749 55.000 0.00 0.00 0.00 3.85
242 243 0.251354 AGTCGTCGCTAGGTGGTCTA 59.749 55.000 0.00 0.00 0.00 2.59
243 244 0.376502 GTCGTCGCTAGGTGGTCTAC 59.623 60.000 0.00 0.00 0.00 2.59
244 245 1.086067 TCGTCGCTAGGTGGTCTACG 61.086 60.000 0.00 0.00 0.00 3.51
245 246 1.086067 CGTCGCTAGGTGGTCTACGA 61.086 60.000 0.00 0.00 32.96 3.43
246 247 1.089920 GTCGCTAGGTGGTCTACGAA 58.910 55.000 0.00 0.00 35.22 3.85
247 248 1.674962 GTCGCTAGGTGGTCTACGAAT 59.325 52.381 0.00 0.00 35.22 3.34
248 249 1.945394 TCGCTAGGTGGTCTACGAATC 59.055 52.381 0.00 0.00 32.69 2.52
249 250 1.948145 CGCTAGGTGGTCTACGAATCT 59.052 52.381 0.00 0.00 0.00 2.40
250 251 2.287069 CGCTAGGTGGTCTACGAATCTG 60.287 54.545 0.00 0.00 0.00 2.90
251 252 2.034812 GCTAGGTGGTCTACGAATCTGG 59.965 54.545 0.00 0.00 0.00 3.86
252 253 2.526888 AGGTGGTCTACGAATCTGGA 57.473 50.000 0.00 0.00 0.00 3.86
253 254 3.033659 AGGTGGTCTACGAATCTGGAT 57.966 47.619 0.00 0.00 0.00 3.41
254 255 2.695666 AGGTGGTCTACGAATCTGGATG 59.304 50.000 0.00 0.00 0.00 3.51
255 256 2.431057 GGTGGTCTACGAATCTGGATGT 59.569 50.000 0.00 0.00 0.00 3.06
256 257 3.635373 GGTGGTCTACGAATCTGGATGTA 59.365 47.826 0.00 0.00 0.00 2.29
257 258 4.098960 GGTGGTCTACGAATCTGGATGTAA 59.901 45.833 0.00 0.00 0.00 2.41
258 259 5.221461 GGTGGTCTACGAATCTGGATGTAAT 60.221 44.000 0.00 0.00 0.00 1.89
259 260 6.281405 GTGGTCTACGAATCTGGATGTAATT 58.719 40.000 0.00 0.00 0.00 1.40
260 261 6.761714 GTGGTCTACGAATCTGGATGTAATTT 59.238 38.462 0.00 0.00 0.00 1.82
261 262 7.280205 GTGGTCTACGAATCTGGATGTAATTTT 59.720 37.037 0.00 0.00 0.00 1.82
262 263 7.827236 TGGTCTACGAATCTGGATGTAATTTTT 59.173 33.333 0.00 0.00 0.00 1.94
263 264 9.321562 GGTCTACGAATCTGGATGTAATTTTTA 57.678 33.333 0.00 0.00 0.00 1.52
286 287 6.604735 ATTTCTGATATTCGTTGTACTGGC 57.395 37.500 0.00 0.00 0.00 4.85
287 288 4.729227 TCTGATATTCGTTGTACTGGCA 57.271 40.909 0.00 0.00 0.00 4.92
288 289 5.276461 TCTGATATTCGTTGTACTGGCAT 57.724 39.130 0.00 0.00 0.00 4.40
289 290 5.049828 TCTGATATTCGTTGTACTGGCATG 58.950 41.667 0.00 0.00 0.00 4.06
290 291 5.017294 TGATATTCGTTGTACTGGCATGA 57.983 39.130 0.00 0.00 0.00 3.07
291 292 5.610398 TGATATTCGTTGTACTGGCATGAT 58.390 37.500 0.00 0.00 0.00 2.45
292 293 6.054941 TGATATTCGTTGTACTGGCATGATT 58.945 36.000 0.00 0.00 0.00 2.57
293 294 4.621068 ATTCGTTGTACTGGCATGATTG 57.379 40.909 0.00 0.00 0.00 2.67
294 295 3.326836 TCGTTGTACTGGCATGATTGA 57.673 42.857 0.00 0.00 0.00 2.57
295 296 3.669536 TCGTTGTACTGGCATGATTGAA 58.330 40.909 0.00 0.00 0.00 2.69
296 297 3.684305 TCGTTGTACTGGCATGATTGAAG 59.316 43.478 0.00 0.00 0.00 3.02
297 298 3.684305 CGTTGTACTGGCATGATTGAAGA 59.316 43.478 0.00 0.00 0.00 2.87
298 299 4.333649 CGTTGTACTGGCATGATTGAAGAT 59.666 41.667 0.00 0.00 0.00 2.40
299 300 5.575957 GTTGTACTGGCATGATTGAAGATG 58.424 41.667 0.00 0.00 0.00 2.90
300 301 5.101648 TGTACTGGCATGATTGAAGATGA 57.898 39.130 0.00 0.00 0.00 2.92
301 302 5.499313 TGTACTGGCATGATTGAAGATGAA 58.501 37.500 0.00 0.00 0.00 2.57
302 303 6.124340 TGTACTGGCATGATTGAAGATGAAT 58.876 36.000 0.00 0.00 0.00 2.57
303 304 7.281841 TGTACTGGCATGATTGAAGATGAATA 58.718 34.615 0.00 0.00 0.00 1.75
304 305 6.879276 ACTGGCATGATTGAAGATGAATAG 57.121 37.500 0.00 0.00 0.00 1.73
305 306 6.598503 ACTGGCATGATTGAAGATGAATAGA 58.401 36.000 0.00 0.00 0.00 1.98
306 307 7.232188 ACTGGCATGATTGAAGATGAATAGAT 58.768 34.615 0.00 0.00 0.00 1.98
307 308 7.724506 ACTGGCATGATTGAAGATGAATAGATT 59.275 33.333 0.00 0.00 0.00 2.40
308 309 7.882179 TGGCATGATTGAAGATGAATAGATTG 58.118 34.615 0.00 0.00 0.00 2.67
309 310 7.039993 TGGCATGATTGAAGATGAATAGATTGG 60.040 37.037 0.00 0.00 0.00 3.16
310 311 7.176165 GGCATGATTGAAGATGAATAGATTGGA 59.824 37.037 0.00 0.00 0.00 3.53
311 312 8.573885 GCATGATTGAAGATGAATAGATTGGAA 58.426 33.333 0.00 0.00 0.00 3.53
313 314 9.863650 ATGATTGAAGATGAATAGATTGGAAGT 57.136 29.630 0.00 0.00 0.00 3.01
314 315 9.690913 TGATTGAAGATGAATAGATTGGAAGTT 57.309 29.630 0.00 0.00 0.00 2.66
358 359 9.631257 ATTGAATGTACTTTCACATCATATGGA 57.369 29.630 20.40 5.86 38.19 3.41
359 360 9.631257 TTGAATGTACTTTCACATCATATGGAT 57.369 29.630 20.40 0.00 38.19 3.41
360 361 9.631257 TGAATGTACTTTCACATCATATGGATT 57.369 29.630 17.62 0.00 38.19 3.01
438 439 6.734104 AGACTTCAGTGAAATCTAACATGC 57.266 37.500 14.93 0.00 0.00 4.06
439 440 6.233434 AGACTTCAGTGAAATCTAACATGCA 58.767 36.000 14.93 0.00 0.00 3.96
440 441 6.370994 AGACTTCAGTGAAATCTAACATGCAG 59.629 38.462 14.93 0.00 0.00 4.41
441 442 6.233434 ACTTCAGTGAAATCTAACATGCAGA 58.767 36.000 7.06 0.00 0.00 4.26
442 443 6.370994 ACTTCAGTGAAATCTAACATGCAGAG 59.629 38.462 7.06 0.00 0.00 3.35
443 444 5.798132 TCAGTGAAATCTAACATGCAGAGT 58.202 37.500 0.00 0.00 0.00 3.24
444 445 6.935167 TCAGTGAAATCTAACATGCAGAGTA 58.065 36.000 0.00 0.00 0.00 2.59
445 446 6.813649 TCAGTGAAATCTAACATGCAGAGTAC 59.186 38.462 0.00 0.00 0.00 2.73
446 447 6.591448 CAGTGAAATCTAACATGCAGAGTACA 59.409 38.462 0.00 0.00 0.00 2.90
447 448 7.279536 CAGTGAAATCTAACATGCAGAGTACAT 59.720 37.037 0.00 0.00 0.00 2.29
448 449 8.478066 AGTGAAATCTAACATGCAGAGTACATA 58.522 33.333 0.00 0.00 0.00 2.29
449 450 9.098355 GTGAAATCTAACATGCAGAGTACATAA 57.902 33.333 0.00 0.00 0.00 1.90
450 451 9.665719 TGAAATCTAACATGCAGAGTACATAAA 57.334 29.630 0.00 0.00 0.00 1.40
454 455 8.492673 TCTAACATGCAGAGTACATAAAAAGG 57.507 34.615 0.00 0.00 0.00 3.11
455 456 8.318412 TCTAACATGCAGAGTACATAAAAAGGA 58.682 33.333 0.00 0.00 0.00 3.36
456 457 7.759489 AACATGCAGAGTACATAAAAAGGAA 57.241 32.000 0.00 0.00 0.00 3.36
457 458 7.383102 ACATGCAGAGTACATAAAAAGGAAG 57.617 36.000 0.00 0.00 0.00 3.46
458 459 6.375455 ACATGCAGAGTACATAAAAAGGAAGG 59.625 38.462 0.00 0.00 0.00 3.46
459 460 5.253330 TGCAGAGTACATAAAAAGGAAGGG 58.747 41.667 0.00 0.00 0.00 3.95
460 461 5.013704 TGCAGAGTACATAAAAAGGAAGGGA 59.986 40.000 0.00 0.00 0.00 4.20
461 462 5.586643 GCAGAGTACATAAAAAGGAAGGGAG 59.413 44.000 0.00 0.00 0.00 4.30
462 463 6.712276 CAGAGTACATAAAAAGGAAGGGAGT 58.288 40.000 0.00 0.00 0.00 3.85
463 464 7.580882 GCAGAGTACATAAAAAGGAAGGGAGTA 60.581 40.741 0.00 0.00 0.00 2.59
464 465 7.982354 CAGAGTACATAAAAAGGAAGGGAGTAG 59.018 40.741 0.00 0.00 0.00 2.57
465 466 7.899709 AGAGTACATAAAAAGGAAGGGAGTAGA 59.100 37.037 0.00 0.00 0.00 2.59
466 467 8.625467 AGTACATAAAAAGGAAGGGAGTAGAT 57.375 34.615 0.00 0.00 0.00 1.98
467 468 8.487028 AGTACATAAAAAGGAAGGGAGTAGATG 58.513 37.037 0.00 0.00 0.00 2.90
468 469 7.272144 ACATAAAAAGGAAGGGAGTAGATGT 57.728 36.000 0.00 0.00 0.00 3.06
469 470 7.699878 ACATAAAAAGGAAGGGAGTAGATGTT 58.300 34.615 0.00 0.00 0.00 2.71
470 471 7.611855 ACATAAAAAGGAAGGGAGTAGATGTTG 59.388 37.037 0.00 0.00 0.00 3.33
471 472 4.576330 AAAGGAAGGGAGTAGATGTTGG 57.424 45.455 0.00 0.00 0.00 3.77
472 473 2.482494 AGGAAGGGAGTAGATGTTGGG 58.518 52.381 0.00 0.00 0.00 4.12
473 474 2.197465 GGAAGGGAGTAGATGTTGGGT 58.803 52.381 0.00 0.00 0.00 4.51
474 475 2.170817 GGAAGGGAGTAGATGTTGGGTC 59.829 54.545 0.00 0.00 0.00 4.46
475 476 1.486211 AGGGAGTAGATGTTGGGTCG 58.514 55.000 0.00 0.00 0.00 4.79
476 477 1.192428 GGGAGTAGATGTTGGGTCGT 58.808 55.000 0.00 0.00 0.00 4.34
477 478 1.553704 GGGAGTAGATGTTGGGTCGTT 59.446 52.381 0.00 0.00 0.00 3.85
478 479 2.762327 GGGAGTAGATGTTGGGTCGTTA 59.238 50.000 0.00 0.00 0.00 3.18
479 480 3.429960 GGGAGTAGATGTTGGGTCGTTAC 60.430 52.174 0.00 0.00 0.00 2.50
480 481 3.194116 GGAGTAGATGTTGGGTCGTTACA 59.806 47.826 0.00 0.00 0.00 2.41
481 482 4.322198 GGAGTAGATGTTGGGTCGTTACAA 60.322 45.833 0.00 0.00 0.00 2.41
482 483 5.217978 AGTAGATGTTGGGTCGTTACAAA 57.782 39.130 0.00 0.00 0.00 2.83
483 484 5.235516 AGTAGATGTTGGGTCGTTACAAAG 58.764 41.667 0.00 0.00 0.00 2.77
484 485 4.081322 AGATGTTGGGTCGTTACAAAGT 57.919 40.909 0.00 0.00 0.00 2.66
485 486 5.217978 AGATGTTGGGTCGTTACAAAGTA 57.782 39.130 0.00 0.00 0.00 2.24
486 487 5.235516 AGATGTTGGGTCGTTACAAAGTAG 58.764 41.667 0.00 0.00 0.00 2.57
487 488 3.132925 TGTTGGGTCGTTACAAAGTAGC 58.867 45.455 0.00 0.00 0.00 3.58
488 489 2.460757 TGGGTCGTTACAAAGTAGCC 57.539 50.000 0.00 0.00 0.00 3.93
489 490 1.693062 TGGGTCGTTACAAAGTAGCCA 59.307 47.619 0.00 0.00 35.47 4.75
490 491 2.303600 TGGGTCGTTACAAAGTAGCCAT 59.696 45.455 0.00 0.00 33.04 4.40
491 492 3.514706 TGGGTCGTTACAAAGTAGCCATA 59.485 43.478 0.00 0.00 33.04 2.74
492 493 4.117685 GGGTCGTTACAAAGTAGCCATAG 58.882 47.826 0.00 0.00 0.00 2.23
493 494 4.142093 GGGTCGTTACAAAGTAGCCATAGA 60.142 45.833 0.00 0.00 0.00 1.98
494 495 4.802563 GGTCGTTACAAAGTAGCCATAGAC 59.197 45.833 0.00 0.00 0.00 2.59
495 496 5.393896 GGTCGTTACAAAGTAGCCATAGACT 60.394 44.000 0.00 0.00 0.00 3.24
496 497 5.515626 GTCGTTACAAAGTAGCCATAGACTG 59.484 44.000 0.00 0.00 0.00 3.51
497 498 4.267928 CGTTACAAAGTAGCCATAGACTGC 59.732 45.833 0.00 0.00 0.00 4.40
498 499 2.893637 ACAAAGTAGCCATAGACTGCG 58.106 47.619 0.00 0.00 0.00 5.18
499 500 2.205074 CAAAGTAGCCATAGACTGCGG 58.795 52.381 0.00 0.00 0.00 5.69
500 501 1.486211 AAGTAGCCATAGACTGCGGT 58.514 50.000 0.00 0.00 0.00 5.68
501 502 2.359981 AGTAGCCATAGACTGCGGTA 57.640 50.000 0.00 0.00 0.00 4.02
502 503 2.662866 AGTAGCCATAGACTGCGGTAA 58.337 47.619 0.00 0.00 0.00 2.85
503 504 3.028850 AGTAGCCATAGACTGCGGTAAA 58.971 45.455 0.00 0.00 0.00 2.01
504 505 3.449737 AGTAGCCATAGACTGCGGTAAAA 59.550 43.478 0.00 0.00 0.00 1.52
505 506 2.629051 AGCCATAGACTGCGGTAAAAC 58.371 47.619 0.00 0.00 0.00 2.43
506 507 1.669265 GCCATAGACTGCGGTAAAACC 59.331 52.381 0.00 0.00 34.05 3.27
507 508 2.937873 GCCATAGACTGCGGTAAAACCA 60.938 50.000 0.00 0.00 38.47 3.67
508 509 2.936498 CCATAGACTGCGGTAAAACCAG 59.064 50.000 0.00 0.00 38.47 4.00
509 510 3.369052 CCATAGACTGCGGTAAAACCAGA 60.369 47.826 0.00 0.00 38.47 3.86
510 511 2.922740 AGACTGCGGTAAAACCAGAA 57.077 45.000 0.00 0.00 38.47 3.02
511 512 3.202829 AGACTGCGGTAAAACCAGAAA 57.797 42.857 0.00 0.00 38.47 2.52
512 513 3.751518 AGACTGCGGTAAAACCAGAAAT 58.248 40.909 0.00 0.00 38.47 2.17
513 514 4.142038 AGACTGCGGTAAAACCAGAAATT 58.858 39.130 0.00 0.00 38.47 1.82
514 515 4.215613 AGACTGCGGTAAAACCAGAAATTC 59.784 41.667 0.00 0.00 38.47 2.17
515 516 3.254903 ACTGCGGTAAAACCAGAAATTCC 59.745 43.478 0.00 0.00 38.47 3.01
516 517 3.223435 TGCGGTAAAACCAGAAATTCCA 58.777 40.909 0.00 0.00 38.47 3.53
517 518 3.829601 TGCGGTAAAACCAGAAATTCCAT 59.170 39.130 0.00 0.00 38.47 3.41
518 519 5.010933 TGCGGTAAAACCAGAAATTCCATA 58.989 37.500 0.00 0.00 38.47 2.74
519 520 5.654650 TGCGGTAAAACCAGAAATTCCATAT 59.345 36.000 0.00 0.00 38.47 1.78
520 521 6.153680 TGCGGTAAAACCAGAAATTCCATATT 59.846 34.615 0.00 0.00 38.47 1.28
521 522 6.695713 GCGGTAAAACCAGAAATTCCATATTC 59.304 38.462 0.00 0.00 38.47 1.75
522 523 7.629652 GCGGTAAAACCAGAAATTCCATATTCA 60.630 37.037 0.00 0.00 38.47 2.57
523 524 8.413229 CGGTAAAACCAGAAATTCCATATTCAT 58.587 33.333 0.00 0.00 38.47 2.57
529 530 9.479549 AACCAGAAATTCCATATTCATACTTGT 57.520 29.630 0.00 0.00 0.00 3.16
547 548 9.351570 CATACTTGTTTTGGTTTTGCAAATTTT 57.648 25.926 13.65 0.00 0.00 1.82
553 554 8.542953 TGTTTTGGTTTTGCAAATTTTTGTTTC 58.457 25.926 13.65 0.76 40.24 2.78
581 582 9.206870 GTTTTCATATTTTCTCTGCATTTCCAA 57.793 29.630 0.00 0.00 0.00 3.53
671 672 1.487231 CTCGCCAGTTCGTTCGTTG 59.513 57.895 0.00 0.00 0.00 4.10
738 739 6.464222 ACGTACATCCCAATATAATGTCCAG 58.536 40.000 0.00 0.00 35.38 3.86
741 742 5.564550 ACATCCCAATATAATGTCCAGCTC 58.435 41.667 0.00 0.00 0.00 4.09
879 886 1.607467 ACCTGCCCAGCATGAAACC 60.607 57.895 0.00 0.00 39.69 3.27
982 991 1.665916 CACGAGCACACCTGGTCTG 60.666 63.158 0.00 0.00 41.94 3.51
1004 1013 2.096496 CCAAAAGCTCGATCGAAATGCT 59.904 45.455 20.83 20.83 35.30 3.79
1011 1020 1.502163 CGATCGAAATGCTGCCTCCC 61.502 60.000 10.26 0.00 0.00 4.30
1111 1120 2.329614 GCGCGGGGCTACAAAAAGA 61.330 57.895 8.83 0.00 39.11 2.52
1112 1121 1.654023 GCGCGGGGCTACAAAAAGAT 61.654 55.000 8.83 0.00 39.11 2.40
1464 1473 3.730761 GTGTGGCGAGGCAGCAAG 61.731 66.667 0.00 0.00 39.27 4.01
1466 1475 2.669569 GTGGCGAGGCAGCAAGAA 60.670 61.111 0.00 0.00 39.27 2.52
1523 1532 2.434884 CACCTTCGCGGTCTGCAT 60.435 61.111 6.13 0.00 44.93 3.96
1591 1600 3.771160 CCGAGGAGGAACACCGGG 61.771 72.222 6.32 0.00 46.15 5.73
1606 1615 3.998672 GGGCACGTTCGTGAGGGA 61.999 66.667 25.87 0.00 38.30 4.20
1709 1719 1.850441 CGTGGATCGTATCGTTTGGTC 59.150 52.381 0.00 0.00 34.52 4.02
1728 1738 3.347216 GTCCCAGTGATTTGTATGCTGT 58.653 45.455 0.00 0.00 0.00 4.40
1729 1739 3.758554 GTCCCAGTGATTTGTATGCTGTT 59.241 43.478 0.00 0.00 0.00 3.16
1730 1740 4.218417 GTCCCAGTGATTTGTATGCTGTTT 59.782 41.667 0.00 0.00 0.00 2.83
1731 1741 4.218200 TCCCAGTGATTTGTATGCTGTTTG 59.782 41.667 0.00 0.00 0.00 2.93
1732 1742 4.022068 CCCAGTGATTTGTATGCTGTTTGT 60.022 41.667 0.00 0.00 0.00 2.83
1905 1917 8.411318 AGATTTGTTTGTGTGTTGAATTCTTC 57.589 30.769 7.05 0.54 0.00 2.87
1906 1918 8.253113 AGATTTGTTTGTGTGTTGAATTCTTCT 58.747 29.630 7.05 0.00 0.00 2.85
1907 1919 8.776376 ATTTGTTTGTGTGTTGAATTCTTCTT 57.224 26.923 7.05 0.00 0.00 2.52
1924 1936 1.065358 CTTTACGTGGCGTACTGGTG 58.935 55.000 0.00 0.00 42.13 4.17
1933 1945 1.518572 CGTACTGGTGTGGCGATCC 60.519 63.158 0.00 0.00 0.00 3.36
1934 1946 1.594833 GTACTGGTGTGGCGATCCA 59.405 57.895 0.00 0.00 40.85 3.41
1944 1956 1.153549 GGCGATCCACTGGTCAGTC 60.154 63.158 0.00 0.00 40.20 3.51
1958 1970 3.182967 GGTCAGTCTACTGCTTGATTCG 58.817 50.000 5.21 0.00 43.46 3.34
1959 1971 2.600867 GTCAGTCTACTGCTTGATTCGC 59.399 50.000 5.21 0.00 43.46 4.70
1965 1977 4.147306 GTCTACTGCTTGATTCGCTATTCG 59.853 45.833 0.00 0.00 40.15 3.34
1977 2034 6.314152 TGATTCGCTATTCGTTAATTTGTCCA 59.686 34.615 0.00 0.00 39.67 4.02
1984 2041 1.135517 CGTTAATTTGTCCAAGGCGGG 60.136 52.381 0.00 0.00 34.36 6.13
2021 2079 0.179100 CCATTCGGATCGTGCTGTCT 60.179 55.000 0.00 0.00 0.00 3.41
2034 2092 1.401552 TGCTGTCTGAACACAGTTTGC 59.598 47.619 2.73 0.00 44.98 3.68
2044 2102 0.667993 CACAGTTTGCCATCCAACGT 59.332 50.000 0.00 0.00 31.97 3.99
2051 2109 2.275380 GCCATCCAACGTGGGCTTT 61.275 57.895 3.23 0.00 43.09 3.51
2074 2132 4.609247 GTCCGTCGAGCGATCCGG 62.609 72.222 11.49 11.49 44.77 5.14
2080 2138 1.596203 TCGAGCGATCCGGACGTAT 60.596 57.895 21.74 13.93 0.00 3.06
2108 2166 7.531857 TTGGGCAAAACTAAGACAAATATGA 57.468 32.000 0.00 0.00 0.00 2.15
2120 2178 2.023673 CAAATATGAGGGGCTTTGCGA 58.976 47.619 0.00 0.00 0.00 5.10
2146 2204 2.936498 CCTGACATCCACATAACGAACC 59.064 50.000 0.00 0.00 0.00 3.62
2152 2210 6.015856 TGACATCCACATAACGAACCAAAAAT 60.016 34.615 0.00 0.00 0.00 1.82
2155 2213 3.606346 CCACATAACGAACCAAAAATCGC 59.394 43.478 0.00 0.00 42.61 4.58
2169 2227 1.496060 AATCGCCATGTACCCTCTCA 58.504 50.000 0.00 0.00 0.00 3.27
2177 2235 3.260380 CCATGTACCCTCTCATCTCCATC 59.740 52.174 0.00 0.00 0.00 3.51
2231 2289 4.112634 AGGTTTGGCAGAAGGTGATTAA 57.887 40.909 0.00 0.00 0.00 1.40
2233 2291 3.367395 GGTTTGGCAGAAGGTGATTAAGC 60.367 47.826 0.00 0.00 0.00 3.09
2262 2320 5.888105 GCAGATAGCATGTTTGAAGTTCAT 58.112 37.500 6.36 0.00 44.79 2.57
2273 2331 5.641636 TGTTTGAAGTTCATAAGCGCTATCA 59.358 36.000 12.05 0.00 0.00 2.15
2297 2355 8.861086 TCAGAGAGGTATACAGATTTATGGAAC 58.139 37.037 5.01 0.00 0.00 3.62
2298 2356 8.091449 CAGAGAGGTATACAGATTTATGGAACC 58.909 40.741 5.01 0.00 0.00 3.62
2300 2358 6.272558 AGAGGTATACAGATTTATGGAACCCC 59.727 42.308 5.01 0.00 0.00 4.95
2305 2363 9.856162 GTATACAGATTTATGGAACCCCTTTTA 57.144 33.333 0.00 0.00 0.00 1.52
2308 2366 8.499288 ACAGATTTATGGAACCCCTTTTAAAA 57.501 30.769 0.00 0.00 0.00 1.52
2309 2367 8.939932 ACAGATTTATGGAACCCCTTTTAAAAA 58.060 29.630 1.66 0.00 0.00 1.94
2340 2398 2.434185 TACGCTGCGCTTGAAGGG 60.434 61.111 23.51 8.58 37.23 3.95
2353 2411 4.209288 CGCTTGAAGGGTATTAGTGATTCG 59.791 45.833 0.53 0.00 0.00 3.34
2356 2414 6.200475 GCTTGAAGGGTATTAGTGATTCGTAC 59.800 42.308 0.00 0.00 0.00 3.67
2391 2544 0.399833 TGTGCTCCATGCCACAAGTA 59.600 50.000 8.90 0.00 42.00 2.24
2396 2549 2.355716 GCTCCATGCCACAAGTAGGTAA 60.356 50.000 0.00 0.00 35.15 2.85
2416 2569 2.399580 AGTACTTACTCATGGAGGGGC 58.600 52.381 0.00 0.00 33.35 5.80
2420 2573 1.971505 TTACTCATGGAGGGGCTGCG 61.972 60.000 0.00 0.00 33.35 5.18
2465 2618 1.136305 ACCATATTGACGAGGTCACCG 59.864 52.381 0.00 0.00 42.60 4.94
2484 2637 3.693578 ACCGTGGAAGTAGAGCTTACTAC 59.306 47.826 4.75 4.75 38.85 2.73
2508 2661 7.762382 ACTTTACATAAAGCTATTGGTGAAGC 58.238 34.615 10.64 0.00 44.92 3.86
2509 2662 7.393234 ACTTTACATAAAGCTATTGGTGAAGCA 59.607 33.333 10.64 0.00 44.92 3.91
2510 2663 5.824904 ACATAAAGCTATTGGTGAAGCAG 57.175 39.130 0.00 0.00 41.32 4.24
2511 2664 5.500234 ACATAAAGCTATTGGTGAAGCAGA 58.500 37.500 0.00 0.00 41.32 4.26
2512 2665 5.587844 ACATAAAGCTATTGGTGAAGCAGAG 59.412 40.000 0.00 0.00 41.32 3.35
2513 2666 3.710209 AAGCTATTGGTGAAGCAGAGT 57.290 42.857 0.00 0.00 41.32 3.24
2514 2667 2.983229 AGCTATTGGTGAAGCAGAGTG 58.017 47.619 0.00 0.00 41.32 3.51
2515 2668 2.012673 GCTATTGGTGAAGCAGAGTGG 58.987 52.381 0.00 0.00 38.63 4.00
2516 2669 2.012673 CTATTGGTGAAGCAGAGTGGC 58.987 52.381 0.00 0.00 0.00 5.01
2518 2671 1.055849 TTGGTGAAGCAGAGTGGCTA 58.944 50.000 0.00 0.00 45.07 3.93
2519 2672 1.279496 TGGTGAAGCAGAGTGGCTAT 58.721 50.000 0.00 0.00 45.07 2.97
2520 2673 1.065926 TGGTGAAGCAGAGTGGCTATG 60.066 52.381 0.00 0.00 45.07 2.23
2521 2674 1.065854 GGTGAAGCAGAGTGGCTATGT 60.066 52.381 0.00 0.00 45.07 2.29
2522 2675 2.005451 GTGAAGCAGAGTGGCTATGTG 58.995 52.381 0.00 0.00 45.07 3.21
2523 2676 1.901833 TGAAGCAGAGTGGCTATGTGA 59.098 47.619 0.00 0.00 45.07 3.58
2524 2677 2.093816 TGAAGCAGAGTGGCTATGTGAG 60.094 50.000 0.00 0.00 45.07 3.51
2525 2678 0.829333 AGCAGAGTGGCTATGTGAGG 59.171 55.000 0.00 0.00 43.70 3.86
2526 2679 0.539051 GCAGAGTGGCTATGTGAGGT 59.461 55.000 0.00 0.00 0.00 3.85
2527 2680 1.472376 GCAGAGTGGCTATGTGAGGTC 60.472 57.143 0.00 0.00 0.00 3.85
2528 2681 2.106566 CAGAGTGGCTATGTGAGGTCT 58.893 52.381 0.00 0.00 0.00 3.85
2529 2682 2.499289 CAGAGTGGCTATGTGAGGTCTT 59.501 50.000 0.00 0.00 0.00 3.01
2530 2683 2.499289 AGAGTGGCTATGTGAGGTCTTG 59.501 50.000 0.00 0.00 0.00 3.02
2531 2684 2.497675 GAGTGGCTATGTGAGGTCTTGA 59.502 50.000 0.00 0.00 0.00 3.02
2532 2685 2.234908 AGTGGCTATGTGAGGTCTTGAC 59.765 50.000 0.00 0.00 0.00 3.18
2533 2686 1.204704 TGGCTATGTGAGGTCTTGACG 59.795 52.381 0.00 0.00 0.00 4.35
2534 2687 1.471676 GGCTATGTGAGGTCTTGACGG 60.472 57.143 0.00 0.00 0.00 4.79
2535 2688 1.476891 GCTATGTGAGGTCTTGACGGA 59.523 52.381 0.00 0.00 0.00 4.69
2536 2689 2.735762 GCTATGTGAGGTCTTGACGGAC 60.736 54.545 0.00 0.00 35.66 4.79
2537 2690 1.633774 ATGTGAGGTCTTGACGGACT 58.366 50.000 0.00 0.00 36.55 3.85
2538 2691 1.410004 TGTGAGGTCTTGACGGACTT 58.590 50.000 0.00 0.00 36.55 3.01
2539 2692 2.589720 TGTGAGGTCTTGACGGACTTA 58.410 47.619 0.00 0.00 36.55 2.24
2540 2693 2.295349 TGTGAGGTCTTGACGGACTTAC 59.705 50.000 0.00 0.00 36.55 2.34
2541 2694 1.538512 TGAGGTCTTGACGGACTTACG 59.461 52.381 0.00 0.00 36.55 3.18
2542 2695 0.243095 AGGTCTTGACGGACTTACGC 59.757 55.000 0.00 0.00 36.55 4.42
2543 2696 0.038892 GGTCTTGACGGACTTACGCA 60.039 55.000 0.00 0.00 36.55 5.24
2544 2697 1.403780 GGTCTTGACGGACTTACGCAT 60.404 52.381 0.00 0.00 36.55 4.73
2545 2698 1.654105 GTCTTGACGGACTTACGCATG 59.346 52.381 0.00 0.00 37.37 4.06
2546 2699 0.999406 CTTGACGGACTTACGCATGG 59.001 55.000 0.00 0.00 37.37 3.66
2547 2700 0.319083 TTGACGGACTTACGCATGGT 59.681 50.000 0.00 0.00 37.37 3.55
2548 2701 0.319083 TGACGGACTTACGCATGGTT 59.681 50.000 0.00 0.00 37.37 3.67
2549 2702 1.545136 TGACGGACTTACGCATGGTTA 59.455 47.619 0.00 0.00 37.37 2.85
2550 2703 2.029200 TGACGGACTTACGCATGGTTAA 60.029 45.455 0.00 0.00 37.37 2.01
2551 2704 2.995258 GACGGACTTACGCATGGTTAAA 59.005 45.455 0.00 0.00 37.37 1.52
2552 2705 3.401182 ACGGACTTACGCATGGTTAAAA 58.599 40.909 0.00 0.00 37.37 1.52
2553 2706 3.814283 ACGGACTTACGCATGGTTAAAAA 59.186 39.130 0.00 0.00 37.37 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 0.852412 CGTAGACGAACAGCGACGAG 60.852 60.000 0.00 0.00 44.57 4.18
10 11 1.131218 CGTAGACGAACAGCGACGA 59.869 57.895 0.00 0.00 44.57 4.20
11 12 0.723790 AACGTAGACGAACAGCGACG 60.724 55.000 9.41 0.00 44.57 5.12
12 13 0.973423 GAACGTAGACGAACAGCGAC 59.027 55.000 9.41 0.00 44.57 5.19
13 14 0.451628 CGAACGTAGACGAACAGCGA 60.452 55.000 9.41 0.00 44.57 4.93
15 16 0.701303 CACGAACGTAGACGAACAGC 59.299 55.000 9.41 0.00 43.02 4.40
16 17 1.707117 CACACGAACGTAGACGAACAG 59.293 52.381 9.41 0.16 43.02 3.16
17 18 1.063912 ACACACGAACGTAGACGAACA 59.936 47.619 9.41 0.00 43.02 3.18
18 19 1.705559 GACACACGAACGTAGACGAAC 59.294 52.381 9.41 1.55 43.02 3.95
19 20 1.599071 AGACACACGAACGTAGACGAA 59.401 47.619 9.41 0.00 43.02 3.85
20 21 1.220529 AGACACACGAACGTAGACGA 58.779 50.000 9.41 0.00 43.02 4.20
21 22 1.967908 GAAGACACACGAACGTAGACG 59.032 52.381 0.00 0.00 46.33 4.18
22 23 1.967908 CGAAGACACACGAACGTAGAC 59.032 52.381 0.00 0.00 0.00 2.59
23 24 1.866601 TCGAAGACACACGAACGTAGA 59.133 47.619 0.00 0.00 35.62 2.59
24 25 2.305252 TCGAAGACACACGAACGTAG 57.695 50.000 0.00 0.00 35.62 3.51
25 26 2.975410 ATCGAAGACACACGAACGTA 57.025 45.000 0.00 0.00 42.51 3.57
26 27 2.129823 AATCGAAGACACACGAACGT 57.870 45.000 0.00 0.00 42.51 3.99
27 28 2.409752 CCAAATCGAAGACACACGAACG 60.410 50.000 0.00 0.00 42.51 3.95
28 29 2.798283 TCCAAATCGAAGACACACGAAC 59.202 45.455 0.00 0.00 42.51 3.95
29 30 3.100658 TCCAAATCGAAGACACACGAA 57.899 42.857 0.00 0.00 42.51 3.85
30 31 2.804697 TCCAAATCGAAGACACACGA 57.195 45.000 0.00 0.00 42.51 4.35
31 32 2.348666 GGATCCAAATCGAAGACACACG 59.651 50.000 6.95 0.00 42.51 4.49
32 33 3.600388 AGGATCCAAATCGAAGACACAC 58.400 45.455 15.82 0.00 42.51 3.82
33 34 3.981071 AGGATCCAAATCGAAGACACA 57.019 42.857 15.82 0.00 42.51 3.72
34 35 3.623510 GGAAGGATCCAAATCGAAGACAC 59.376 47.826 15.82 0.00 45.79 3.67
35 36 3.678806 CGGAAGGATCCAAATCGAAGACA 60.679 47.826 15.82 0.00 46.97 3.41
36 37 2.866762 CGGAAGGATCCAAATCGAAGAC 59.133 50.000 15.82 0.00 46.97 3.01
37 38 2.764010 TCGGAAGGATCCAAATCGAAGA 59.236 45.455 15.82 6.97 46.97 2.87
38 39 3.179443 TCGGAAGGATCCAAATCGAAG 57.821 47.619 15.82 4.91 46.97 3.79
39 40 3.728845 GATCGGAAGGATCCAAATCGAA 58.271 45.455 15.82 1.61 46.97 3.71
40 41 3.386768 GATCGGAAGGATCCAAATCGA 57.613 47.619 15.82 16.75 46.97 3.59
49 50 5.470047 AAAATAGCGTAGATCGGAAGGAT 57.530 39.130 0.00 0.00 40.26 3.24
50 51 4.931661 AAAATAGCGTAGATCGGAAGGA 57.068 40.909 0.00 0.00 40.26 3.36
51 52 5.047847 TGAAAAATAGCGTAGATCGGAAGG 58.952 41.667 0.00 0.00 40.26 3.46
52 53 6.399039 CGATGAAAAATAGCGTAGATCGGAAG 60.399 42.308 0.00 0.00 40.26 3.46
53 54 5.401376 CGATGAAAAATAGCGTAGATCGGAA 59.599 40.000 0.00 0.00 40.26 4.30
54 55 4.915667 CGATGAAAAATAGCGTAGATCGGA 59.084 41.667 0.00 0.00 40.26 4.55
55 56 4.090066 CCGATGAAAAATAGCGTAGATCGG 59.910 45.833 0.00 0.00 43.53 4.18
56 57 4.433022 GCCGATGAAAAATAGCGTAGATCG 60.433 45.833 0.00 0.00 43.12 3.69
57 58 4.447724 TGCCGATGAAAAATAGCGTAGATC 59.552 41.667 0.00 0.00 0.00 2.75
58 59 4.377021 TGCCGATGAAAAATAGCGTAGAT 58.623 39.130 0.00 0.00 0.00 1.98
59 60 3.787785 TGCCGATGAAAAATAGCGTAGA 58.212 40.909 0.00 0.00 0.00 2.59
60 61 3.604772 GCTGCCGATGAAAAATAGCGTAG 60.605 47.826 0.00 0.00 0.00 3.51
61 62 2.286833 GCTGCCGATGAAAAATAGCGTA 59.713 45.455 0.00 0.00 0.00 4.42
62 63 1.064060 GCTGCCGATGAAAAATAGCGT 59.936 47.619 0.00 0.00 0.00 5.07
63 64 1.746760 GCTGCCGATGAAAAATAGCG 58.253 50.000 0.00 0.00 0.00 4.26
64 65 1.597937 CCGCTGCCGATGAAAAATAGC 60.598 52.381 0.00 0.00 36.29 2.97
65 66 1.670811 ACCGCTGCCGATGAAAAATAG 59.329 47.619 0.00 0.00 36.29 1.73
66 67 1.745232 ACCGCTGCCGATGAAAAATA 58.255 45.000 0.00 0.00 36.29 1.40
67 68 0.887933 AACCGCTGCCGATGAAAAAT 59.112 45.000 0.00 0.00 36.29 1.82
68 69 0.039617 CAACCGCTGCCGATGAAAAA 60.040 50.000 0.00 0.00 36.29 1.94
69 70 1.169661 ACAACCGCTGCCGATGAAAA 61.170 50.000 5.38 0.00 36.29 2.29
70 71 1.169661 AACAACCGCTGCCGATGAAA 61.170 50.000 5.38 0.00 36.29 2.69
71 72 1.599518 AACAACCGCTGCCGATGAA 60.600 52.632 5.38 0.00 36.29 2.57
72 73 2.031919 AACAACCGCTGCCGATGA 59.968 55.556 5.38 0.00 36.29 2.92
73 74 2.176546 CAACAACCGCTGCCGATG 59.823 61.111 0.00 0.00 36.29 3.84
74 75 2.281484 ACAACAACCGCTGCCGAT 60.281 55.556 0.00 0.00 36.29 4.18
75 76 3.276091 CACAACAACCGCTGCCGA 61.276 61.111 0.00 0.00 36.29 5.54
76 77 2.982038 GAACACAACAACCGCTGCCG 62.982 60.000 0.00 0.00 0.00 5.69
77 78 1.299089 GAACACAACAACCGCTGCC 60.299 57.895 0.00 0.00 0.00 4.85
78 79 0.592247 CAGAACACAACAACCGCTGC 60.592 55.000 0.00 0.00 0.00 5.25
79 80 0.029300 CCAGAACACAACAACCGCTG 59.971 55.000 0.00 0.00 0.00 5.18
80 81 1.101049 CCCAGAACACAACAACCGCT 61.101 55.000 0.00 0.00 0.00 5.52
81 82 1.358759 CCCAGAACACAACAACCGC 59.641 57.895 0.00 0.00 0.00 5.68
82 83 0.750182 ACCCCAGAACACAACAACCG 60.750 55.000 0.00 0.00 0.00 4.44
83 84 0.744281 CACCCCAGAACACAACAACC 59.256 55.000 0.00 0.00 0.00 3.77
84 85 0.102300 GCACCCCAGAACACAACAAC 59.898 55.000 0.00 0.00 0.00 3.32
85 86 0.033601 AGCACCCCAGAACACAACAA 60.034 50.000 0.00 0.00 0.00 2.83
86 87 0.751277 CAGCACCCCAGAACACAACA 60.751 55.000 0.00 0.00 0.00 3.33
87 88 1.455383 CCAGCACCCCAGAACACAAC 61.455 60.000 0.00 0.00 0.00 3.32
88 89 1.152777 CCAGCACCCCAGAACACAA 60.153 57.895 0.00 0.00 0.00 3.33
89 90 2.337879 GACCAGCACCCCAGAACACA 62.338 60.000 0.00 0.00 0.00 3.72
90 91 1.600916 GACCAGCACCCCAGAACAC 60.601 63.158 0.00 0.00 0.00 3.32
91 92 2.829384 GGACCAGCACCCCAGAACA 61.829 63.158 0.00 0.00 0.00 3.18
92 93 1.198759 TAGGACCAGCACCCCAGAAC 61.199 60.000 0.00 0.00 0.00 3.01
93 94 0.253160 ATAGGACCAGCACCCCAGAA 60.253 55.000 0.00 0.00 0.00 3.02
94 95 0.982852 CATAGGACCAGCACCCCAGA 60.983 60.000 0.00 0.00 0.00 3.86
95 96 1.528824 CATAGGACCAGCACCCCAG 59.471 63.158 0.00 0.00 0.00 4.45
96 97 2.000701 CCATAGGACCAGCACCCCA 61.001 63.158 0.00 0.00 0.00 4.96
97 98 2.757124 CCCATAGGACCAGCACCCC 61.757 68.421 0.00 0.00 33.47 4.95
98 99 2.757124 CCCCATAGGACCAGCACCC 61.757 68.421 0.00 0.00 38.24 4.61
99 100 1.984288 GACCCCATAGGACCAGCACC 61.984 65.000 0.00 0.00 39.89 5.01
100 101 0.983378 AGACCCCATAGGACCAGCAC 60.983 60.000 0.00 0.00 39.89 4.40
101 102 0.253160 AAGACCCCATAGGACCAGCA 60.253 55.000 0.00 0.00 39.89 4.41
102 103 1.694696 CTAAGACCCCATAGGACCAGC 59.305 57.143 0.00 0.00 39.89 4.85
103 104 1.694696 GCTAAGACCCCATAGGACCAG 59.305 57.143 0.00 0.00 39.89 4.00
104 105 1.009060 TGCTAAGACCCCATAGGACCA 59.991 52.381 0.00 0.00 39.89 4.02
105 106 1.416772 GTGCTAAGACCCCATAGGACC 59.583 57.143 0.00 0.00 39.89 4.46
106 107 1.068741 CGTGCTAAGACCCCATAGGAC 59.931 57.143 0.00 0.00 39.89 3.85
107 108 1.063492 TCGTGCTAAGACCCCATAGGA 60.063 52.381 0.00 0.00 39.89 2.94
108 109 1.410004 TCGTGCTAAGACCCCATAGG 58.590 55.000 0.00 0.00 43.78 2.57
109 110 2.628178 TCATCGTGCTAAGACCCCATAG 59.372 50.000 0.00 0.00 0.00 2.23
110 111 2.364324 GTCATCGTGCTAAGACCCCATA 59.636 50.000 0.00 0.00 0.00 2.74
111 112 1.139058 GTCATCGTGCTAAGACCCCAT 59.861 52.381 0.00 0.00 0.00 4.00
112 113 0.535335 GTCATCGTGCTAAGACCCCA 59.465 55.000 0.00 0.00 0.00 4.96
113 114 0.824759 AGTCATCGTGCTAAGACCCC 59.175 55.000 0.00 0.00 0.00 4.95
114 115 2.541556 GAAGTCATCGTGCTAAGACCC 58.458 52.381 0.00 0.00 0.00 4.46
115 116 2.166664 AGGAAGTCATCGTGCTAAGACC 59.833 50.000 0.00 0.00 0.00 3.85
116 117 3.119459 TCAGGAAGTCATCGTGCTAAGAC 60.119 47.826 0.00 0.00 42.37 3.01
117 118 3.089284 TCAGGAAGTCATCGTGCTAAGA 58.911 45.455 0.00 0.00 42.37 2.10
118 119 3.119316 AGTCAGGAAGTCATCGTGCTAAG 60.119 47.826 0.00 0.00 42.37 2.18
119 120 2.826128 AGTCAGGAAGTCATCGTGCTAA 59.174 45.455 0.00 0.00 42.37 3.09
120 121 2.164422 CAGTCAGGAAGTCATCGTGCTA 59.836 50.000 0.00 0.00 42.37 3.49
121 122 1.067283 CAGTCAGGAAGTCATCGTGCT 60.067 52.381 0.00 0.00 42.37 4.40
122 123 1.337260 ACAGTCAGGAAGTCATCGTGC 60.337 52.381 0.00 0.00 42.37 5.34
123 124 2.230025 AGACAGTCAGGAAGTCATCGTG 59.770 50.000 2.66 0.00 43.67 4.35
124 125 2.520069 AGACAGTCAGGAAGTCATCGT 58.480 47.619 2.66 0.00 34.80 3.73
125 126 3.692101 AGTAGACAGTCAGGAAGTCATCG 59.308 47.826 2.66 0.00 34.80 3.84
126 127 5.648526 TGTAGTAGACAGTCAGGAAGTCATC 59.351 44.000 2.66 0.00 34.80 2.92
127 128 5.571285 TGTAGTAGACAGTCAGGAAGTCAT 58.429 41.667 2.66 0.00 34.80 3.06
128 129 4.981812 TGTAGTAGACAGTCAGGAAGTCA 58.018 43.478 2.66 0.00 34.80 3.41
129 130 5.241064 TGTTGTAGTAGACAGTCAGGAAGTC 59.759 44.000 2.66 0.00 39.88 3.01
130 131 5.138276 TGTTGTAGTAGACAGTCAGGAAGT 58.862 41.667 2.66 0.00 39.88 3.01
131 132 5.707242 TGTTGTAGTAGACAGTCAGGAAG 57.293 43.478 2.66 0.00 39.88 3.46
132 133 5.597182 ACTTGTTGTAGTAGACAGTCAGGAA 59.403 40.000 2.66 0.00 39.88 3.36
133 134 5.138276 ACTTGTTGTAGTAGACAGTCAGGA 58.862 41.667 2.66 0.00 39.88 3.86
134 135 5.455056 ACTTGTTGTAGTAGACAGTCAGG 57.545 43.478 2.66 0.00 39.88 3.86
135 136 6.199154 CACAACTTGTTGTAGTAGACAGTCAG 59.801 42.308 17.26 0.00 39.88 3.51
136 137 6.040247 CACAACTTGTTGTAGTAGACAGTCA 58.960 40.000 17.26 0.00 39.88 3.41
137 138 5.050972 GCACAACTTGTTGTAGTAGACAGTC 60.051 44.000 17.26 0.00 39.88 3.51
138 139 4.809426 GCACAACTTGTTGTAGTAGACAGT 59.191 41.667 17.26 0.00 39.88 3.55
139 140 4.211374 GGCACAACTTGTTGTAGTAGACAG 59.789 45.833 17.26 5.63 39.88 3.51
140 141 4.124238 GGCACAACTTGTTGTAGTAGACA 58.876 43.478 17.26 0.00 35.78 3.41
141 142 3.497262 GGGCACAACTTGTTGTAGTAGAC 59.503 47.826 17.26 8.51 33.17 2.59
142 143 3.735591 GGGCACAACTTGTTGTAGTAGA 58.264 45.455 17.26 0.00 33.17 2.59
143 144 2.478894 CGGGCACAACTTGTTGTAGTAG 59.521 50.000 17.26 7.80 33.17 2.57
144 145 2.485903 CGGGCACAACTTGTTGTAGTA 58.514 47.619 17.26 0.00 33.17 1.82
145 146 1.305201 CGGGCACAACTTGTTGTAGT 58.695 50.000 17.26 0.00 33.17 2.73
146 147 0.591170 CCGGGCACAACTTGTTGTAG 59.409 55.000 17.26 12.96 33.17 2.74
147 148 1.448922 GCCGGGCACAACTTGTTGTA 61.449 55.000 15.62 0.00 33.17 2.41
148 149 2.781158 GCCGGGCACAACTTGTTGT 61.781 57.895 15.62 12.73 35.14 3.32
149 150 2.027460 GCCGGGCACAACTTGTTG 59.973 61.111 15.62 11.44 0.00 3.33
150 151 2.123897 AGCCGGGCACAACTTGTT 60.124 55.556 23.09 0.00 0.00 2.83
151 152 2.594592 GAGCCGGGCACAACTTGT 60.595 61.111 23.09 0.00 0.00 3.16
152 153 3.365265 GGAGCCGGGCACAACTTG 61.365 66.667 23.09 0.00 0.00 3.16
170 171 4.996434 CATCGCCCCTCCATCGCC 62.996 72.222 0.00 0.00 0.00 5.54
171 172 3.928779 TCATCGCCCCTCCATCGC 61.929 66.667 0.00 0.00 0.00 4.58
172 173 2.029666 GTCATCGCCCCTCCATCG 59.970 66.667 0.00 0.00 0.00 3.84
173 174 2.029666 CGTCATCGCCCCTCCATC 59.970 66.667 0.00 0.00 0.00 3.51
174 175 3.550431 CCGTCATCGCCCCTCCAT 61.550 66.667 0.00 0.00 35.54 3.41
200 201 3.181967 CACCGAAGCGAGCCGAAG 61.182 66.667 0.00 0.00 0.00 3.79
204 205 3.793144 CAAGCACCGAAGCGAGCC 61.793 66.667 0.00 0.00 40.15 4.70
205 206 1.687494 CTACAAGCACCGAAGCGAGC 61.687 60.000 0.00 0.00 40.15 5.03
206 207 0.388649 ACTACAAGCACCGAAGCGAG 60.389 55.000 0.00 0.00 40.15 5.03
207 208 0.388134 GACTACAAGCACCGAAGCGA 60.388 55.000 0.00 0.00 40.15 4.93
208 209 1.674611 CGACTACAAGCACCGAAGCG 61.675 60.000 0.00 0.00 40.15 4.68
209 210 0.666577 ACGACTACAAGCACCGAAGC 60.667 55.000 0.00 0.00 0.00 3.86
210 211 1.337821 GACGACTACAAGCACCGAAG 58.662 55.000 0.00 0.00 0.00 3.79
211 212 0.386352 CGACGACTACAAGCACCGAA 60.386 55.000 0.00 0.00 0.00 4.30
212 213 1.208358 CGACGACTACAAGCACCGA 59.792 57.895 0.00 0.00 0.00 4.69
213 214 2.434134 GCGACGACTACAAGCACCG 61.434 63.158 0.00 0.00 0.00 4.94
214 215 0.169672 TAGCGACGACTACAAGCACC 59.830 55.000 0.00 0.00 0.00 5.01
215 216 1.536149 CTAGCGACGACTACAAGCAC 58.464 55.000 0.00 0.00 0.00 4.40
216 217 0.450583 CCTAGCGACGACTACAAGCA 59.549 55.000 0.00 0.00 0.00 3.91
217 218 0.450983 ACCTAGCGACGACTACAAGC 59.549 55.000 0.00 0.00 0.00 4.01
218 219 1.202154 CCACCTAGCGACGACTACAAG 60.202 57.143 0.00 0.00 0.00 3.16
219 220 0.806868 CCACCTAGCGACGACTACAA 59.193 55.000 0.00 0.00 0.00 2.41
220 221 0.321919 ACCACCTAGCGACGACTACA 60.322 55.000 0.00 0.00 0.00 2.74
221 222 0.376502 GACCACCTAGCGACGACTAC 59.623 60.000 0.00 0.00 0.00 2.73
222 223 0.251354 AGACCACCTAGCGACGACTA 59.749 55.000 0.00 0.00 0.00 2.59
223 224 0.251354 TAGACCACCTAGCGACGACT 59.749 55.000 0.00 0.00 0.00 4.18
224 225 0.376502 GTAGACCACCTAGCGACGAC 59.623 60.000 0.00 0.00 0.00 4.34
225 226 1.086067 CGTAGACCACCTAGCGACGA 61.086 60.000 0.00 0.00 0.00 4.20
226 227 1.086067 TCGTAGACCACCTAGCGACG 61.086 60.000 0.00 0.00 31.20 5.12
227 228 1.089920 TTCGTAGACCACCTAGCGAC 58.910 55.000 0.00 0.00 34.32 5.19
228 229 1.945394 GATTCGTAGACCACCTAGCGA 59.055 52.381 0.00 0.00 34.32 4.93
229 230 1.948145 AGATTCGTAGACCACCTAGCG 59.052 52.381 0.00 0.00 34.32 4.26
230 231 2.034812 CCAGATTCGTAGACCACCTAGC 59.965 54.545 0.00 0.00 34.32 3.42
231 232 3.552875 TCCAGATTCGTAGACCACCTAG 58.447 50.000 0.00 0.00 34.32 3.02
232 233 3.657398 TCCAGATTCGTAGACCACCTA 57.343 47.619 0.00 0.00 34.32 3.08
233 234 2.526888 TCCAGATTCGTAGACCACCT 57.473 50.000 0.00 0.00 34.32 4.00
234 235 2.431057 ACATCCAGATTCGTAGACCACC 59.569 50.000 0.00 0.00 34.32 4.61
235 236 3.802948 ACATCCAGATTCGTAGACCAC 57.197 47.619 0.00 0.00 34.32 4.16
236 237 6.479972 AATTACATCCAGATTCGTAGACCA 57.520 37.500 0.00 0.00 34.32 4.02
237 238 7.787725 AAAATTACATCCAGATTCGTAGACC 57.212 36.000 0.00 0.00 34.32 3.85
260 261 8.609176 GCCAGTACAACGAATATCAGAAATAAA 58.391 33.333 0.00 0.00 0.00 1.40
261 262 7.766738 TGCCAGTACAACGAATATCAGAAATAA 59.233 33.333 0.00 0.00 0.00 1.40
262 263 7.269316 TGCCAGTACAACGAATATCAGAAATA 58.731 34.615 0.00 0.00 0.00 1.40
263 264 6.112734 TGCCAGTACAACGAATATCAGAAAT 58.887 36.000 0.00 0.00 0.00 2.17
264 265 5.483811 TGCCAGTACAACGAATATCAGAAA 58.516 37.500 0.00 0.00 0.00 2.52
265 266 5.079689 TGCCAGTACAACGAATATCAGAA 57.920 39.130 0.00 0.00 0.00 3.02
266 267 4.729227 TGCCAGTACAACGAATATCAGA 57.271 40.909 0.00 0.00 0.00 3.27
267 268 5.049828 TCATGCCAGTACAACGAATATCAG 58.950 41.667 0.00 0.00 0.00 2.90
268 269 5.017294 TCATGCCAGTACAACGAATATCA 57.983 39.130 0.00 0.00 0.00 2.15
269 270 6.202762 TCAATCATGCCAGTACAACGAATATC 59.797 38.462 0.00 0.00 0.00 1.63
270 271 6.054941 TCAATCATGCCAGTACAACGAATAT 58.945 36.000 0.00 0.00 0.00 1.28
271 272 5.423886 TCAATCATGCCAGTACAACGAATA 58.576 37.500 0.00 0.00 0.00 1.75
272 273 4.260985 TCAATCATGCCAGTACAACGAAT 58.739 39.130 0.00 0.00 0.00 3.34
273 274 3.669536 TCAATCATGCCAGTACAACGAA 58.330 40.909 0.00 0.00 0.00 3.85
274 275 3.326836 TCAATCATGCCAGTACAACGA 57.673 42.857 0.00 0.00 0.00 3.85
275 276 3.684305 TCTTCAATCATGCCAGTACAACG 59.316 43.478 0.00 0.00 0.00 4.10
276 277 5.355071 TCATCTTCAATCATGCCAGTACAAC 59.645 40.000 0.00 0.00 0.00 3.32
277 278 5.499313 TCATCTTCAATCATGCCAGTACAA 58.501 37.500 0.00 0.00 0.00 2.41
278 279 5.101648 TCATCTTCAATCATGCCAGTACA 57.898 39.130 0.00 0.00 0.00 2.90
279 280 6.630444 ATTCATCTTCAATCATGCCAGTAC 57.370 37.500 0.00 0.00 0.00 2.73
280 281 7.738847 TCTATTCATCTTCAATCATGCCAGTA 58.261 34.615 0.00 0.00 0.00 2.74
281 282 6.598503 TCTATTCATCTTCAATCATGCCAGT 58.401 36.000 0.00 0.00 0.00 4.00
282 283 7.689446 ATCTATTCATCTTCAATCATGCCAG 57.311 36.000 0.00 0.00 0.00 4.85
283 284 7.039993 CCAATCTATTCATCTTCAATCATGCCA 60.040 37.037 0.00 0.00 0.00 4.92
284 285 7.176165 TCCAATCTATTCATCTTCAATCATGCC 59.824 37.037 0.00 0.00 0.00 4.40
285 286 8.107399 TCCAATCTATTCATCTTCAATCATGC 57.893 34.615 0.00 0.00 0.00 4.06
287 288 9.863650 ACTTCCAATCTATTCATCTTCAATCAT 57.136 29.630 0.00 0.00 0.00 2.45
288 289 9.690913 AACTTCCAATCTATTCATCTTCAATCA 57.309 29.630 0.00 0.00 0.00 2.57
332 333 9.631257 TCCATATGATGTGAAAGTACATTCAAT 57.369 29.630 14.64 10.53 41.15 2.57
333 334 9.631257 ATCCATATGATGTGAAAGTACATTCAA 57.369 29.630 14.64 6.63 41.15 2.69
334 335 9.631257 AATCCATATGATGTGAAAGTACATTCA 57.369 29.630 9.38 9.38 41.15 2.57
413 414 7.877612 TGCATGTTAGATTTCACTGAAGTCTAA 59.122 33.333 23.20 23.20 43.45 2.10
414 415 7.386059 TGCATGTTAGATTTCACTGAAGTCTA 58.614 34.615 16.28 16.28 38.97 2.59
415 416 6.233434 TGCATGTTAGATTTCACTGAAGTCT 58.767 36.000 17.95 17.95 40.67 3.24
416 417 6.369890 TCTGCATGTTAGATTTCACTGAAGTC 59.630 38.462 6.23 6.23 0.00 3.01
417 418 6.233434 TCTGCATGTTAGATTTCACTGAAGT 58.767 36.000 0.00 0.00 0.00 3.01
418 419 6.370994 ACTCTGCATGTTAGATTTCACTGAAG 59.629 38.462 0.00 0.00 0.00 3.02
419 420 6.233434 ACTCTGCATGTTAGATTTCACTGAA 58.767 36.000 0.00 0.00 0.00 3.02
420 421 5.798132 ACTCTGCATGTTAGATTTCACTGA 58.202 37.500 0.00 0.00 0.00 3.41
421 422 6.591448 TGTACTCTGCATGTTAGATTTCACTG 59.409 38.462 0.00 0.00 0.00 3.66
422 423 6.701340 TGTACTCTGCATGTTAGATTTCACT 58.299 36.000 0.00 0.00 0.00 3.41
423 424 6.968131 TGTACTCTGCATGTTAGATTTCAC 57.032 37.500 0.00 0.00 0.00 3.18
424 425 9.665719 TTTATGTACTCTGCATGTTAGATTTCA 57.334 29.630 0.00 0.00 0.00 2.69
428 429 9.113838 CCTTTTTATGTACTCTGCATGTTAGAT 57.886 33.333 0.00 0.00 0.00 1.98
429 430 8.318412 TCCTTTTTATGTACTCTGCATGTTAGA 58.682 33.333 0.00 0.00 0.00 2.10
430 431 8.492673 TCCTTTTTATGTACTCTGCATGTTAG 57.507 34.615 0.00 0.00 0.00 2.34
431 432 8.856153 TTCCTTTTTATGTACTCTGCATGTTA 57.144 30.769 0.00 0.00 0.00 2.41
432 433 7.094205 CCTTCCTTTTTATGTACTCTGCATGTT 60.094 37.037 0.00 0.00 0.00 2.71
433 434 6.375455 CCTTCCTTTTTATGTACTCTGCATGT 59.625 38.462 0.00 0.00 0.00 3.21
434 435 6.183360 CCCTTCCTTTTTATGTACTCTGCATG 60.183 42.308 0.00 0.00 0.00 4.06
435 436 5.888161 CCCTTCCTTTTTATGTACTCTGCAT 59.112 40.000 0.00 0.00 0.00 3.96
436 437 5.013704 TCCCTTCCTTTTTATGTACTCTGCA 59.986 40.000 0.00 0.00 0.00 4.41
437 438 5.497474 TCCCTTCCTTTTTATGTACTCTGC 58.503 41.667 0.00 0.00 0.00 4.26
438 439 6.712276 ACTCCCTTCCTTTTTATGTACTCTG 58.288 40.000 0.00 0.00 0.00 3.35
439 440 6.954352 ACTCCCTTCCTTTTTATGTACTCT 57.046 37.500 0.00 0.00 0.00 3.24
440 441 8.075761 TCTACTCCCTTCCTTTTTATGTACTC 57.924 38.462 0.00 0.00 0.00 2.59
441 442 8.487028 CATCTACTCCCTTCCTTTTTATGTACT 58.513 37.037 0.00 0.00 0.00 2.73
442 443 8.265764 ACATCTACTCCCTTCCTTTTTATGTAC 58.734 37.037 0.00 0.00 0.00 2.90
443 444 8.388656 ACATCTACTCCCTTCCTTTTTATGTA 57.611 34.615 0.00 0.00 0.00 2.29
444 445 7.272144 ACATCTACTCCCTTCCTTTTTATGT 57.728 36.000 0.00 0.00 0.00 2.29
445 446 7.067494 CCAACATCTACTCCCTTCCTTTTTATG 59.933 40.741 0.00 0.00 0.00 1.90
446 447 7.119387 CCAACATCTACTCCCTTCCTTTTTAT 58.881 38.462 0.00 0.00 0.00 1.40
447 448 6.481643 CCAACATCTACTCCCTTCCTTTTTA 58.518 40.000 0.00 0.00 0.00 1.52
448 449 5.325239 CCAACATCTACTCCCTTCCTTTTT 58.675 41.667 0.00 0.00 0.00 1.94
449 450 4.263949 CCCAACATCTACTCCCTTCCTTTT 60.264 45.833 0.00 0.00 0.00 2.27
450 451 3.267031 CCCAACATCTACTCCCTTCCTTT 59.733 47.826 0.00 0.00 0.00 3.11
451 452 2.846827 CCCAACATCTACTCCCTTCCTT 59.153 50.000 0.00 0.00 0.00 3.36
452 453 2.225908 ACCCAACATCTACTCCCTTCCT 60.226 50.000 0.00 0.00 0.00 3.36
453 454 2.170817 GACCCAACATCTACTCCCTTCC 59.829 54.545 0.00 0.00 0.00 3.46
454 455 2.159085 CGACCCAACATCTACTCCCTTC 60.159 54.545 0.00 0.00 0.00 3.46
455 456 1.831736 CGACCCAACATCTACTCCCTT 59.168 52.381 0.00 0.00 0.00 3.95
456 457 1.273098 ACGACCCAACATCTACTCCCT 60.273 52.381 0.00 0.00 0.00 4.20
457 458 1.192428 ACGACCCAACATCTACTCCC 58.808 55.000 0.00 0.00 0.00 4.30
458 459 3.194116 TGTAACGACCCAACATCTACTCC 59.806 47.826 0.00 0.00 0.00 3.85
459 460 4.445452 TGTAACGACCCAACATCTACTC 57.555 45.455 0.00 0.00 0.00 2.59
460 461 4.877378 TTGTAACGACCCAACATCTACT 57.123 40.909 0.00 0.00 0.00 2.57
461 462 4.992951 ACTTTGTAACGACCCAACATCTAC 59.007 41.667 0.00 0.00 0.00 2.59
462 463 5.217978 ACTTTGTAACGACCCAACATCTA 57.782 39.130 0.00 0.00 0.00 1.98
463 464 4.081322 ACTTTGTAACGACCCAACATCT 57.919 40.909 0.00 0.00 0.00 2.90
464 465 4.142966 GCTACTTTGTAACGACCCAACATC 60.143 45.833 0.00 0.00 0.00 3.06
465 466 3.749609 GCTACTTTGTAACGACCCAACAT 59.250 43.478 0.00 0.00 0.00 2.71
466 467 3.132925 GCTACTTTGTAACGACCCAACA 58.867 45.455 0.00 0.00 0.00 3.33
467 468 2.481568 GGCTACTTTGTAACGACCCAAC 59.518 50.000 0.00 0.00 0.00 3.77
468 469 2.104451 TGGCTACTTTGTAACGACCCAA 59.896 45.455 0.00 0.00 0.00 4.12
469 470 1.693062 TGGCTACTTTGTAACGACCCA 59.307 47.619 0.00 0.00 0.00 4.51
470 471 2.460757 TGGCTACTTTGTAACGACCC 57.539 50.000 0.00 0.00 0.00 4.46
471 472 4.802563 GTCTATGGCTACTTTGTAACGACC 59.197 45.833 0.00 0.00 0.00 4.79
472 473 5.515626 CAGTCTATGGCTACTTTGTAACGAC 59.484 44.000 0.00 0.00 0.00 4.34
473 474 5.647589 CAGTCTATGGCTACTTTGTAACGA 58.352 41.667 0.00 0.00 0.00 3.85
474 475 4.267928 GCAGTCTATGGCTACTTTGTAACG 59.732 45.833 0.00 0.00 0.00 3.18
475 476 4.267928 CGCAGTCTATGGCTACTTTGTAAC 59.732 45.833 0.00 0.00 0.00 2.50
476 477 4.430007 CGCAGTCTATGGCTACTTTGTAA 58.570 43.478 0.00 0.00 0.00 2.41
477 478 3.181479 CCGCAGTCTATGGCTACTTTGTA 60.181 47.826 0.00 0.00 0.00 2.41
478 479 2.418746 CCGCAGTCTATGGCTACTTTGT 60.419 50.000 0.00 0.00 0.00 2.83
479 480 2.205074 CCGCAGTCTATGGCTACTTTG 58.795 52.381 0.00 0.00 0.00 2.77
480 481 1.831736 ACCGCAGTCTATGGCTACTTT 59.168 47.619 0.00 0.00 0.00 2.66
481 482 1.486211 ACCGCAGTCTATGGCTACTT 58.514 50.000 0.00 0.00 0.00 2.24
482 483 2.359981 TACCGCAGTCTATGGCTACT 57.640 50.000 0.00 0.00 0.00 2.57
483 484 3.447918 TTTACCGCAGTCTATGGCTAC 57.552 47.619 0.00 0.00 0.00 3.58
484 485 3.431207 GGTTTTACCGCAGTCTATGGCTA 60.431 47.826 0.00 0.00 0.00 3.93
485 486 2.629051 GTTTTACCGCAGTCTATGGCT 58.371 47.619 0.00 0.00 0.00 4.75
486 487 1.669265 GGTTTTACCGCAGTCTATGGC 59.331 52.381 0.00 0.00 0.00 4.40
487 488 2.936498 CTGGTTTTACCGCAGTCTATGG 59.064 50.000 0.00 0.00 42.58 2.74
488 489 3.857052 TCTGGTTTTACCGCAGTCTATG 58.143 45.455 0.00 0.00 42.58 2.23
489 490 4.546829 TTCTGGTTTTACCGCAGTCTAT 57.453 40.909 0.00 0.00 42.58 1.98
490 491 4.339872 TTTCTGGTTTTACCGCAGTCTA 57.660 40.909 0.00 0.00 42.58 2.59
491 492 2.922740 TTCTGGTTTTACCGCAGTCT 57.077 45.000 0.00 0.00 42.58 3.24
492 493 4.473199 GAATTTCTGGTTTTACCGCAGTC 58.527 43.478 0.00 0.00 42.58 3.51
493 494 3.254903 GGAATTTCTGGTTTTACCGCAGT 59.745 43.478 0.00 0.00 42.58 4.40
494 495 3.254657 TGGAATTTCTGGTTTTACCGCAG 59.745 43.478 0.00 0.00 42.58 5.18
495 496 3.223435 TGGAATTTCTGGTTTTACCGCA 58.777 40.909 0.00 0.00 42.58 5.69
496 497 3.926821 TGGAATTTCTGGTTTTACCGC 57.073 42.857 0.00 0.00 42.58 5.68
497 498 7.767261 TGAATATGGAATTTCTGGTTTTACCG 58.233 34.615 0.00 0.00 42.58 4.02
503 504 9.479549 ACAAGTATGAATATGGAATTTCTGGTT 57.520 29.630 0.00 0.00 0.00 3.67
504 505 9.479549 AACAAGTATGAATATGGAATTTCTGGT 57.520 29.630 0.00 0.00 0.00 4.00
513 514 9.703892 CAAAACCAAAACAAGTATGAATATGGA 57.296 29.630 0.00 0.00 0.00 3.41
514 515 8.442384 GCAAAACCAAAACAAGTATGAATATGG 58.558 33.333 0.00 0.00 0.00 2.74
515 516 8.986847 TGCAAAACCAAAACAAGTATGAATATG 58.013 29.630 0.00 0.00 0.00 1.78
516 517 9.553064 TTGCAAAACCAAAACAAGTATGAATAT 57.447 25.926 0.00 0.00 0.00 1.28
517 518 8.948631 TTGCAAAACCAAAACAAGTATGAATA 57.051 26.923 0.00 0.00 0.00 1.75
518 519 7.856145 TTGCAAAACCAAAACAAGTATGAAT 57.144 28.000 0.00 0.00 0.00 2.57
519 520 7.672983 TTTGCAAAACCAAAACAAGTATGAA 57.327 28.000 10.02 0.00 32.20 2.57
520 521 7.856145 ATTTGCAAAACCAAAACAAGTATGA 57.144 28.000 17.19 0.00 38.12 2.15
521 522 8.908172 AAATTTGCAAAACCAAAACAAGTATG 57.092 26.923 17.19 0.00 38.12 2.39
522 523 9.920133 AAAAATTTGCAAAACCAAAACAAGTAT 57.080 22.222 17.19 0.00 38.12 2.12
523 524 9.185192 CAAAAATTTGCAAAACCAAAACAAGTA 57.815 25.926 17.19 0.00 38.12 2.24
524 525 7.708322 ACAAAAATTTGCAAAACCAAAACAAGT 59.292 25.926 17.19 2.50 41.79 3.16
525 526 8.070007 ACAAAAATTTGCAAAACCAAAACAAG 57.930 26.923 17.19 1.91 41.79 3.16
526 527 8.424274 AACAAAAATTTGCAAAACCAAAACAA 57.576 23.077 17.19 0.00 41.79 2.83
527 528 8.424274 AAACAAAAATTTGCAAAACCAAAACA 57.576 23.077 17.19 0.00 41.79 2.83
528 529 8.759641 AGAAACAAAAATTTGCAAAACCAAAAC 58.240 25.926 17.19 3.85 41.79 2.43
529 530 8.758715 CAGAAACAAAAATTTGCAAAACCAAAA 58.241 25.926 17.19 0.00 41.79 2.44
547 548 9.248291 GCAGAGAAAATATGAAAACAGAAACAA 57.752 29.630 0.00 0.00 0.00 2.83
553 554 8.866956 GGAAATGCAGAGAAAATATGAAAACAG 58.133 33.333 0.00 0.00 0.00 3.16
568 569 3.181493 CGGAGGAAATTGGAAATGCAGAG 60.181 47.826 0.00 0.00 0.00 3.35
671 672 0.741221 GCCAGACCATGACGAGAACC 60.741 60.000 0.00 0.00 0.00 3.62
712 713 7.380536 TGGACATTATATTGGGATGTACGTAC 58.619 38.462 18.90 18.90 37.42 3.67
748 749 0.586319 ACGTCTGTTGCGTGATTTGG 59.414 50.000 0.00 0.00 41.33 3.28
749 750 2.159841 CCTACGTCTGTTGCGTGATTTG 60.160 50.000 0.00 0.00 42.87 2.32
901 908 3.755965 TTGCTGCGTGTGGTATTTATG 57.244 42.857 0.00 0.00 0.00 1.90
949 956 2.591715 GTGGTTGACCTGCGTGCT 60.592 61.111 1.34 0.00 36.82 4.40
982 991 2.444351 CATTTCGATCGAGCTTTTGGC 58.556 47.619 18.54 0.00 42.19 4.52
1102 1111 1.363145 CCGCCGCCGATCTTTTTGTA 61.363 55.000 0.00 0.00 36.29 2.41
1107 1116 4.856801 ATGCCGCCGCCGATCTTT 62.857 61.111 0.00 0.00 36.29 2.52
1365 1374 3.011517 ATGGCCCGCTCCTTCACT 61.012 61.111 0.00 0.00 0.00 3.41
1455 1464 2.348998 CCGACCTTCTTGCTGCCT 59.651 61.111 0.00 0.00 0.00 4.75
1456 1465 3.435186 GCCGACCTTCTTGCTGCC 61.435 66.667 0.00 0.00 0.00 4.85
1457 1466 2.359230 AGCCGACCTTCTTGCTGC 60.359 61.111 0.00 0.00 31.70 5.25
1458 1467 3.571119 CAGCCGACCTTCTTGCTG 58.429 61.111 0.00 0.00 44.43 4.41
1460 1469 3.793144 CGCAGCCGACCTTCTTGC 61.793 66.667 0.00 0.00 36.29 4.01
1583 1592 4.534141 ACGAACGTGCCCGGTGTT 62.534 61.111 0.00 0.00 38.78 3.32
1591 1600 0.041576 GTTTTCCCTCACGAACGTGC 60.042 55.000 20.24 0.00 45.04 5.34
1606 1615 4.244802 CGTGCGTGCCACCGTTTT 62.245 61.111 0.00 0.00 41.53 2.43
1633 1642 2.703409 GATCATGCACGCACCGAC 59.297 61.111 0.00 0.00 0.00 4.79
1635 1644 3.928769 CCGATCATGCACGCACCG 61.929 66.667 0.00 0.00 0.00 4.94
1636 1645 2.511373 TCCGATCATGCACGCACC 60.511 61.111 0.00 0.00 0.00 5.01
1701 1711 1.953686 ACAAATCACTGGGACCAAACG 59.046 47.619 0.00 0.00 0.00 3.60
1709 1719 4.022068 ACAAACAGCATACAAATCACTGGG 60.022 41.667 0.00 0.00 32.60 4.45
1731 1741 9.443244 GCAAATTAACGAATAACGAATCAAAAC 57.557 29.630 0.00 0.00 45.77 2.43
1732 1742 9.400638 AGCAAATTAACGAATAACGAATCAAAA 57.599 25.926 0.00 0.00 45.77 2.44
1905 1917 1.065358 CACCAGTACGCCACGTAAAG 58.935 55.000 0.82 0.00 43.95 1.85
1906 1918 0.388659 ACACCAGTACGCCACGTAAA 59.611 50.000 0.82 0.00 43.95 2.01
1907 1919 0.318869 CACACCAGTACGCCACGTAA 60.319 55.000 0.82 0.00 43.95 3.18
1933 1945 2.297315 TCAAGCAGTAGACTGACCAGTG 59.703 50.000 13.87 3.63 46.59 3.66
1934 1946 2.598565 TCAAGCAGTAGACTGACCAGT 58.401 47.619 13.87 1.78 46.59 4.00
1944 1956 4.045104 ACGAATAGCGAATCAAGCAGTAG 58.955 43.478 0.00 0.00 44.57 2.57
1958 1970 5.034797 GCCTTGGACAAATTAACGAATAGC 58.965 41.667 0.00 0.00 0.00 2.97
1959 1971 5.263185 CGCCTTGGACAAATTAACGAATAG 58.737 41.667 0.00 0.00 0.00 1.73
1965 1977 1.403647 GCCCGCCTTGGACAAATTAAC 60.404 52.381 0.00 0.00 42.00 2.01
1977 2034 4.678743 GGTTTGAGGGCCCGCCTT 62.679 66.667 24.15 0.72 36.10 4.35
1984 2041 4.759205 ATGCGGGGGTTTGAGGGC 62.759 66.667 0.00 0.00 0.00 5.19
2011 2069 0.459899 ACTGTGTTCAGACAGCACGA 59.540 50.000 4.06 0.00 46.28 4.35
2021 2079 2.064434 TGGATGGCAAACTGTGTTCA 57.936 45.000 0.00 0.00 0.00 3.18
2034 2092 1.540267 TAAAAGCCCACGTTGGATGG 58.460 50.000 10.41 0.00 40.96 3.51
2044 2102 0.108041 GACGGACCGATAAAAGCCCA 60.108 55.000 23.38 0.00 0.00 5.36
2051 2109 1.162181 ATCGCTCGACGGACCGATAA 61.162 55.000 23.38 3.72 38.77 1.75
2086 2144 6.405842 CCCTCATATTTGTCTTAGTTTTGCCC 60.406 42.308 0.00 0.00 0.00 5.36
2093 2151 5.717119 AAGCCCCTCATATTTGTCTTAGT 57.283 39.130 0.00 0.00 0.00 2.24
2095 2153 4.644685 GCAAAGCCCCTCATATTTGTCTTA 59.355 41.667 0.00 0.00 35.55 2.10
2104 2162 1.004277 ACTTTCGCAAAGCCCCTCATA 59.996 47.619 8.09 0.00 42.27 2.15
2105 2163 0.251341 ACTTTCGCAAAGCCCCTCAT 60.251 50.000 8.09 0.00 42.27 2.90
2108 2166 1.603739 GGACTTTCGCAAAGCCCCT 60.604 57.895 8.09 0.00 42.27 4.79
2120 2178 4.020573 TCGTTATGTGGATGTCAGGACTTT 60.021 41.667 0.65 0.00 0.00 2.66
2146 2204 3.016736 AGAGGGTACATGGCGATTTTTG 58.983 45.455 0.00 0.00 0.00 2.44
2152 2210 1.040646 GATGAGAGGGTACATGGCGA 58.959 55.000 0.00 0.00 0.00 5.54
2155 2213 2.682594 TGGAGATGAGAGGGTACATGG 58.317 52.381 0.00 0.00 0.00 3.66
2231 2289 1.019673 CATGCTATCTGCCAAACGCT 58.980 50.000 0.00 0.00 42.00 5.07
2233 2291 3.119884 TCAAACATGCTATCTGCCAAACG 60.120 43.478 0.00 0.00 42.00 3.60
2253 2311 5.067805 TCTCTGATAGCGCTTATGAACTTCA 59.932 40.000 18.68 5.61 0.00 3.02
2260 2318 3.932545 ACCTCTCTGATAGCGCTTATG 57.067 47.619 18.68 3.95 0.00 1.90
2262 2320 5.557866 TGTATACCTCTCTGATAGCGCTTA 58.442 41.667 18.68 1.37 0.00 3.09
2273 2331 7.235812 GGGTTCCATAAATCTGTATACCTCTCT 59.764 40.741 0.00 0.00 0.00 3.10
2309 2367 3.484557 CGCAGCGTACCGTGAATATTTTT 60.485 43.478 6.65 0.00 0.00 1.94
2310 2368 2.029970 CGCAGCGTACCGTGAATATTTT 59.970 45.455 6.65 0.00 0.00 1.82
2311 2369 1.591158 CGCAGCGTACCGTGAATATTT 59.409 47.619 6.65 0.00 0.00 1.40
2312 2370 1.205657 CGCAGCGTACCGTGAATATT 58.794 50.000 6.65 0.00 0.00 1.28
2313 2371 2.881441 CGCAGCGTACCGTGAATAT 58.119 52.632 6.65 0.00 0.00 1.28
2314 2372 4.388007 CGCAGCGTACCGTGAATA 57.612 55.556 6.65 0.00 0.00 1.75
2327 2385 2.609459 CACTAATACCCTTCAAGCGCAG 59.391 50.000 11.47 0.72 0.00 5.18
2353 2411 6.055588 AGCACACCAACATTATATCCAGTAC 58.944 40.000 0.00 0.00 0.00 2.73
2356 2414 4.516698 GGAGCACACCAACATTATATCCAG 59.483 45.833 0.00 0.00 0.00 3.86
2391 2544 5.209659 CCCTCCATGAGTAAGTACTTACCT 58.790 45.833 32.51 22.91 44.79 3.08
2396 2549 2.022918 AGCCCCTCCATGAGTAAGTACT 60.023 50.000 0.00 0.00 39.71 2.73
2416 2569 1.202348 AGAATCTCCATGACGACGCAG 60.202 52.381 0.00 0.00 0.00 5.18
2420 2573 7.380065 GTCTATTTACAGAATCTCCATGACGAC 59.620 40.741 0.00 0.00 0.00 4.34
2453 2606 1.080705 CTTCCACGGTGACCTCGTC 60.081 63.158 10.28 0.00 38.94 4.20
2484 2637 7.761409 TGCTTCACCAATAGCTTTATGTAAAG 58.239 34.615 7.91 7.91 44.14 1.85
2493 2646 3.341823 CACTCTGCTTCACCAATAGCTT 58.658 45.455 0.00 0.00 38.22 3.74
2495 2648 2.012673 CCACTCTGCTTCACCAATAGC 58.987 52.381 0.00 0.00 37.89 2.97
2508 2661 2.106566 AGACCTCACATAGCCACTCTG 58.893 52.381 0.00 0.00 0.00 3.35
2509 2662 2.499289 CAAGACCTCACATAGCCACTCT 59.501 50.000 0.00 0.00 0.00 3.24
2510 2663 2.497675 TCAAGACCTCACATAGCCACTC 59.502 50.000 0.00 0.00 0.00 3.51
2511 2664 2.234908 GTCAAGACCTCACATAGCCACT 59.765 50.000 0.00 0.00 0.00 4.00
2512 2665 2.622436 GTCAAGACCTCACATAGCCAC 58.378 52.381 0.00 0.00 0.00 5.01
2513 2666 1.204704 CGTCAAGACCTCACATAGCCA 59.795 52.381 0.00 0.00 0.00 4.75
2514 2667 1.471676 CCGTCAAGACCTCACATAGCC 60.472 57.143 0.00 0.00 0.00 3.93
2515 2668 1.476891 TCCGTCAAGACCTCACATAGC 59.523 52.381 0.00 0.00 0.00 2.97
2516 2669 2.755655 AGTCCGTCAAGACCTCACATAG 59.244 50.000 0.00 0.00 37.49 2.23
2517 2670 2.803956 AGTCCGTCAAGACCTCACATA 58.196 47.619 0.00 0.00 37.49 2.29
2518 2671 1.633774 AGTCCGTCAAGACCTCACAT 58.366 50.000 0.00 0.00 37.49 3.21
2519 2672 1.410004 AAGTCCGTCAAGACCTCACA 58.590 50.000 0.00 0.00 37.49 3.58
2520 2673 2.667724 CGTAAGTCCGTCAAGACCTCAC 60.668 54.545 0.00 0.00 37.49 3.51
2521 2674 1.538512 CGTAAGTCCGTCAAGACCTCA 59.461 52.381 0.00 0.00 37.49 3.86
2522 2675 1.731750 GCGTAAGTCCGTCAAGACCTC 60.732 57.143 0.00 0.00 37.49 3.85
2523 2676 0.243095 GCGTAAGTCCGTCAAGACCT 59.757 55.000 0.00 0.00 37.49 3.85
2524 2677 0.038892 TGCGTAAGTCCGTCAAGACC 60.039 55.000 0.00 0.00 37.49 3.85
2525 2678 1.654105 CATGCGTAAGTCCGTCAAGAC 59.346 52.381 0.00 0.00 41.68 3.01
2526 2679 1.403647 CCATGCGTAAGTCCGTCAAGA 60.404 52.381 0.00 0.00 41.68 3.02
2527 2680 0.999406 CCATGCGTAAGTCCGTCAAG 59.001 55.000 0.00 0.00 41.68 3.02
2528 2681 0.319083 ACCATGCGTAAGTCCGTCAA 59.681 50.000 0.00 0.00 41.68 3.18
2529 2682 0.319083 AACCATGCGTAAGTCCGTCA 59.681 50.000 0.00 0.00 41.68 4.35
2530 2683 2.282701 TAACCATGCGTAAGTCCGTC 57.717 50.000 0.00 0.00 41.68 4.79
2531 2684 2.747396 TTAACCATGCGTAAGTCCGT 57.253 45.000 0.00 0.00 41.68 4.69
2532 2685 4.407496 TTTTTAACCATGCGTAAGTCCG 57.593 40.909 0.00 0.00 41.68 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.