Multiple sequence alignment - TraesCS6B01G372100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G372100 chr6B 100.000 8223 0 0 996 9218 645555350 645547128 0.000000e+00 15186.0
1 TraesCS6B01G372100 chr6B 100.000 644 0 0 1 644 645556345 645555702 0.000000e+00 1190.0
2 TraesCS6B01G372100 chr6B 94.792 96 5 0 3557 3652 96970852 96970757 5.770000e-32 150.0
3 TraesCS6B01G372100 chr6B 89.286 112 10 2 3539 3649 218219314 218219424 1.250000e-28 139.0
4 TraesCS6B01G372100 chr6B 91.667 96 6 2 3555 3649 398109097 398109003 2.090000e-26 132.0
5 TraesCS6B01G372100 chr6B 100.000 28 0 0 6297 6324 53934773 53934746 1.700000e-02 52.8
6 TraesCS6B01G372100 chr6A 96.029 4155 103 13 4054 8189 573510467 573506356 0.000000e+00 6702.0
7 TraesCS6B01G372100 chr6A 91.749 3042 166 39 996 4005 573513445 573510457 0.000000e+00 4148.0
8 TraesCS6B01G372100 chr6A 87.164 670 52 9 1 644 573514136 573513475 0.000000e+00 730.0
9 TraesCS6B01G372100 chr6D 96.414 3207 71 8 4054 7252 428925620 428922450 0.000000e+00 5245.0
10 TraesCS6B01G372100 chr6D 93.825 1425 55 14 2585 4005 428927005 428925610 0.000000e+00 2113.0
11 TraesCS6B01G372100 chr6D 95.326 1027 33 6 7218 8237 428922451 428921433 0.000000e+00 1616.0
12 TraesCS6B01G372100 chr6D 93.386 1013 58 7 1529 2538 428928239 428927233 0.000000e+00 1491.0
13 TraesCS6B01G372100 chr6D 93.522 494 26 1 996 1489 428928837 428928350 0.000000e+00 730.0
14 TraesCS6B01G372100 chr6D 93.979 382 20 2 8838 9216 428921081 428920700 8.030000e-160 575.0
15 TraesCS6B01G372100 chr6D 92.977 299 14 3 8377 8668 428921400 428921102 6.610000e-116 429.0
16 TraesCS6B01G372100 chr6D 89.630 135 11 3 385 519 428929155 428929024 1.590000e-37 169.0
17 TraesCS6B01G372100 chr2B 79.028 1378 208 55 3827 5177 743191701 743193024 0.000000e+00 869.0
18 TraesCS6B01G372100 chr2B 83.589 457 53 15 3936 4385 742896228 742896669 8.620000e-110 409.0
19 TraesCS6B01G372100 chr2B 79.845 387 65 9 4459 4842 743187624 743188000 4.240000e-68 270.0
20 TraesCS6B01G372100 chr2B 84.184 196 29 2 3955 4148 743196720 743196915 1.220000e-43 189.0
21 TraesCS6B01G372100 chr2B 90.826 109 8 2 8271 8379 66782554 66782660 2.680000e-30 145.0
22 TraesCS6B01G372100 chr2A 79.147 1266 202 42 3936 5177 740948512 740949739 0.000000e+00 819.0
23 TraesCS6B01G372100 chr2A 78.976 1270 198 44 3935 5177 740981561 740982788 0.000000e+00 802.0
24 TraesCS6B01G372100 chr2A 78.707 1268 204 43 3936 5177 741002424 741003651 0.000000e+00 785.0
25 TraesCS6B01G372100 chr2A 83.984 256 33 7 3955 4207 740986543 740986793 1.200000e-58 239.0
26 TraesCS6B01G372100 chr2A 88.889 117 12 1 3556 3671 16151493 16151609 9.650000e-30 143.0
27 TraesCS6B01G372100 chr2A 85.714 77 9 1 3744 3818 740932977 740933053 7.670000e-11 80.5
28 TraesCS6B01G372100 chr2D 81.625 751 116 15 4120 4863 609211307 609212042 3.680000e-168 603.0
29 TraesCS6B01G372100 chr2D 85.641 195 26 2 3955 4148 609190004 609190197 4.360000e-48 204.0
30 TraesCS6B01G372100 chr2D 80.714 280 33 12 3936 4208 608983090 608983355 2.030000e-46 198.0
31 TraesCS6B01G372100 chr2D 89.076 119 9 3 8258 8375 41825007 41824892 2.680000e-30 145.0
32 TraesCS6B01G372100 chrUn 97.826 92 2 0 3562 3653 224653306 224653397 9.580000e-35 159.0
33 TraesCS6B01G372100 chr4B 95.833 96 4 0 3558 3653 187091158 187091063 1.240000e-33 156.0
34 TraesCS6B01G372100 chr4B 94.845 97 4 1 3563 3658 435130412 435130508 5.770000e-32 150.0
35 TraesCS6B01G372100 chr4B 88.525 122 10 3 8255 8375 542972538 542972656 2.680000e-30 145.0
36 TraesCS6B01G372100 chr4B 88.235 119 10 3 8258 8375 440872461 440872346 1.250000e-28 139.0
37 TraesCS6B01G372100 chr5D 94.845 97 3 2 3555 3649 504793027 504792931 5.770000e-32 150.0
38 TraesCS6B01G372100 chr5D 82.979 94 12 2 287 380 354501232 354501321 2.130000e-11 82.4
39 TraesCS6B01G372100 chr5B 90.435 115 9 2 8262 8376 288005274 288005386 5.770000e-32 150.0
40 TraesCS6B01G372100 chr5B 92.308 104 8 0 8272 8375 695894735 695894838 2.070000e-31 148.0
41 TraesCS6B01G372100 chr5B 89.565 115 10 2 8262 8376 261395888 261396000 2.680000e-30 145.0
42 TraesCS6B01G372100 chr5B 91.935 62 5 0 319 380 418811703 418811764 4.590000e-13 87.9
43 TraesCS6B01G372100 chr5B 100.000 28 0 0 6297 6324 185308126 185308153 1.700000e-02 52.8
44 TraesCS6B01G372100 chr5B 100.000 28 0 0 6297 6324 444820847 444820820 1.700000e-02 52.8
45 TraesCS6B01G372100 chr1A 93.939 99 6 0 3554 3652 572633156 572633058 5.770000e-32 150.0
46 TraesCS6B01G372100 chr1B 89.076 119 9 3 8258 8375 533258384 533258499 2.680000e-30 145.0
47 TraesCS6B01G372100 chr1B 88.235 119 10 3 8258 8375 581649672 581649787 1.250000e-28 139.0
48 TraesCS6B01G372100 chr1B 100.000 28 0 0 6297 6324 126387804 126387831 1.700000e-02 52.8
49 TraesCS6B01G372100 chr5A 82.979 94 12 2 287 380 455464131 455464220 2.130000e-11 82.4
50 TraesCS6B01G372100 chr7B 100.000 28 0 0 6297 6324 424967553 424967580 1.700000e-02 52.8
51 TraesCS6B01G372100 chr7B 100.000 28 0 0 6297 6324 730207461 730207434 1.700000e-02 52.8
52 TraesCS6B01G372100 chr3B 100.000 28 0 0 6297 6324 786834021 786833994 1.700000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G372100 chr6B 645547128 645556345 9217 True 8188.000000 15186 100.000000 1 9218 2 chr6B.!!$R4 9217
1 TraesCS6B01G372100 chr6A 573506356 573514136 7780 True 3860.000000 6702 91.647333 1 8189 3 chr6A.!!$R1 8188
2 TraesCS6B01G372100 chr6D 428920700 428929155 8455 True 1546.000000 5245 93.632375 385 9216 8 chr6D.!!$R1 8831
3 TraesCS6B01G372100 chr2B 743187624 743196915 9291 False 442.666667 869 81.019000 3827 5177 3 chr2B.!!$F3 1350
4 TraesCS6B01G372100 chr2A 740948512 740949739 1227 False 819.000000 819 79.147000 3936 5177 1 chr2A.!!$F3 1241
5 TraesCS6B01G372100 chr2A 741002424 741003651 1227 False 785.000000 785 78.707000 3936 5177 1 chr2A.!!$F4 1241
6 TraesCS6B01G372100 chr2A 740981561 740986793 5232 False 520.500000 802 81.480000 3935 5177 2 chr2A.!!$F5 1242
7 TraesCS6B01G372100 chr2D 609211307 609212042 735 False 603.000000 603 81.625000 4120 4863 1 chr2D.!!$F3 743

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
581 617 0.106217 AAATGGACGGGCCCCTATTG 60.106 55.000 18.66 3.65 34.97 1.90 F
586 622 1.318576 GACGGGCCCCTATTGAATTG 58.681 55.000 18.66 0.00 0.00 2.32 F
1490 1528 0.798776 GGATGTGAGTTTGTCCGCTG 59.201 55.000 0.00 0.00 0.00 5.18 F
1585 1695 0.172352 CCGTGTTAATTTGCCGGCAT 59.828 50.000 33.25 19.10 0.00 4.40 F
1761 1880 0.243907 TAGTTCTGTGAGCTGCGGAC 59.756 55.000 0.00 0.00 0.00 4.79 F
3492 3803 0.178992 TTCCTGTCTGGCTGTTTGGG 60.179 55.000 0.00 0.00 35.26 4.12 F
3718 4029 0.907704 ACCCCCTGTATCAAGCGTGA 60.908 55.000 4.40 4.40 38.41 4.35 F
4627 4991 1.002921 ACGTGGAGATGGATGGGGA 59.997 57.895 0.00 0.00 0.00 4.81 F
6593 7717 0.751452 CTCAGCTCCTAGCATGCAGA 59.249 55.000 21.98 12.44 45.56 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1402 1440 0.109781 CAACGCATAAACCGCAAGCT 60.110 50.000 0.00 0.00 0.00 3.74 R
1566 1676 0.172352 ATGCCGGCAAATTAACACGG 59.828 50.000 36.33 0.00 46.78 4.94 R
2583 2891 2.031682 GCTGTGTCCTGCTAACAACAAG 60.032 50.000 0.00 0.00 33.16 3.16 R
3492 3803 0.609131 TTTTACTGCTGAGCCTGGGC 60.609 55.000 0.23 3.00 42.33 5.36 R
3700 4011 0.251916 TTCACGCTTGATACAGGGGG 59.748 55.000 0.00 0.00 0.00 5.40 R
4400 4762 0.472044 TCAGTACTGCCTTGGTGCAA 59.528 50.000 18.45 0.00 41.51 4.08 R
4696 5060 1.280421 GCACCTCTTGGAGATGGACTT 59.720 52.381 0.00 0.00 37.04 3.01 R
6595 7719 0.033109 TAGGAGCTGCTACTGGCTGA 60.033 55.000 24.51 0.27 41.52 4.26 R
8363 9532 0.034896 CCACAACTTACTGCCTCCGT 59.965 55.000 0.00 0.00 0.00 4.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
92 93 8.492673 AAAGACTGAGCAATATTTATCGAACA 57.507 30.769 0.00 0.00 0.00 3.18
116 117 4.277174 AGTTCATCTCAGCTCATAGGTACG 59.723 45.833 0.00 0.00 0.00 3.67
129 130 4.808649 GTACGAGTACCTGGCTGC 57.191 61.111 2.13 0.00 0.00 5.25
138 139 2.336484 TACCTGGCTGCAGTGCACAA 62.336 55.000 21.04 4.15 33.79 3.33
217 219 0.684535 TTGTGATGCCTCCTTGTCGA 59.315 50.000 0.00 0.00 0.00 4.20
231 233 3.390521 TCGATCCGCACCAAGGCT 61.391 61.111 0.00 0.00 0.00 4.58
232 234 2.436646 CGATCCGCACCAAGGCTT 60.437 61.111 0.00 0.00 0.00 4.35
234 236 1.508088 GATCCGCACCAAGGCTTTG 59.492 57.895 0.68 0.68 0.00 2.77
245 247 2.094545 CCAAGGCTTTGCAGGTAACATC 60.095 50.000 2.41 0.00 33.55 3.06
246 248 2.557924 CAAGGCTTTGCAGGTAACATCA 59.442 45.455 0.00 0.00 41.41 3.07
254 256 5.565592 TTGCAGGTAACATCATTGATCAC 57.434 39.130 0.00 0.00 41.41 3.06
289 293 4.116747 AGACCTCTTTCAATAGCTGACG 57.883 45.455 0.00 0.00 32.21 4.35
298 302 0.179045 AATAGCTGACGGGATGGCAC 60.179 55.000 0.00 0.00 0.00 5.01
300 304 1.264749 TAGCTGACGGGATGGCACTT 61.265 55.000 0.00 0.00 0.00 3.16
311 315 4.214119 CGGGATGGCACTTACATAATGAAG 59.786 45.833 0.00 0.00 0.00 3.02
319 323 8.584157 TGGCACTTACATAATGAAGATTTTGTT 58.416 29.630 0.00 0.00 35.88 2.83
320 324 9.423061 GGCACTTACATAATGAAGATTTTGTTT 57.577 29.630 0.00 0.00 35.88 2.83
331 335 6.061441 TGAAGATTTTGTTTGAGTAGCCAGA 58.939 36.000 0.00 0.00 0.00 3.86
373 377 1.618343 CCTCCATCCACCAACAAAACC 59.382 52.381 0.00 0.00 0.00 3.27
405 409 8.547967 TCTTCATGTATTTGTAAGTCCTCAAC 57.452 34.615 0.00 0.00 0.00 3.18
406 410 7.606456 TCTTCATGTATTTGTAAGTCCTCAACC 59.394 37.037 0.00 0.00 0.00 3.77
424 428 4.125703 CAACCCATGCAAAGCTACAAAAA 58.874 39.130 0.00 0.00 0.00 1.94
458 462 6.855763 TCTGGTAAAATTTCCATGCATTCT 57.144 33.333 0.00 0.00 33.01 2.40
467 471 8.937634 AAATTTCCATGCATTCTTATTCACTC 57.062 30.769 0.00 0.00 0.00 3.51
496 500 2.956333 TGTTCAGACAGAGAAACTCGGA 59.044 45.455 5.99 0.00 35.36 4.55
511 515 3.175594 ACTCGGACTGGGGTTTACATTA 58.824 45.455 0.00 0.00 0.00 1.90
514 518 2.237893 CGGACTGGGGTTTACATTAGGT 59.762 50.000 0.00 0.00 0.00 3.08
547 578 4.841443 TGCATGCAGGATAAATGATGTC 57.159 40.909 18.46 0.00 0.00 3.06
581 617 0.106217 AAATGGACGGGCCCCTATTG 60.106 55.000 18.66 3.65 34.97 1.90
586 622 1.318576 GACGGGCCCCTATTGAATTG 58.681 55.000 18.66 0.00 0.00 2.32
597 633 6.570764 GCCCCTATTGAATTGACACGTAAAAA 60.571 38.462 0.00 0.00 0.00 1.94
598 634 6.804783 CCCCTATTGAATTGACACGTAAAAAC 59.195 38.462 0.00 0.00 0.00 2.43
599 635 6.521821 CCCTATTGAATTGACACGTAAAAACG 59.478 38.462 0.00 0.00 39.31 3.60
601 637 7.960738 CCTATTGAATTGACACGTAAAAACGAT 59.039 33.333 4.76 0.00 36.85 3.73
1284 1320 3.486252 CTACTACTCCCGCTGCGCC 62.486 68.421 18.00 0.00 0.00 6.53
1290 1326 3.950794 CTCCCGCTGCGCCTGTTAA 62.951 63.158 18.00 0.00 0.00 2.01
1333 1369 1.926511 GCCGGTTGCTGATGGAGTTG 61.927 60.000 1.90 0.00 36.87 3.16
1393 1431 5.507650 GGAAACTGGGAACGCTATAGTCTAG 60.508 48.000 0.84 0.00 0.00 2.43
1490 1528 0.798776 GGATGTGAGTTTGTCCGCTG 59.201 55.000 0.00 0.00 0.00 5.18
1492 1530 1.873591 GATGTGAGTTTGTCCGCTGTT 59.126 47.619 0.00 0.00 0.00 3.16
1583 1693 4.469052 CCGTGTTAATTTGCCGGC 57.531 55.556 22.73 22.73 0.00 6.13
1585 1695 0.172352 CCGTGTTAATTTGCCGGCAT 59.828 50.000 33.25 19.10 0.00 4.40
1586 1696 1.267365 CGTGTTAATTTGCCGGCATG 58.733 50.000 33.25 7.00 0.00 4.06
1607 1717 1.713597 TATGCATAATCTCGGCTGCG 58.286 50.000 3.27 0.00 37.44 5.18
1652 1762 2.615747 GGTTTAGTGAGAGGGGCTTGTC 60.616 54.545 0.00 0.00 0.00 3.18
1680 1791 2.636647 TGATGAACTCAAGTGCACCA 57.363 45.000 14.63 2.29 36.19 4.17
1734 1845 0.882474 CGCCATGGTTTTCGGGTTTA 59.118 50.000 14.67 0.00 0.00 2.01
1735 1846 1.269998 CGCCATGGTTTTCGGGTTTAA 59.730 47.619 14.67 0.00 0.00 1.52
1736 1847 2.288273 CGCCATGGTTTTCGGGTTTAAA 60.288 45.455 14.67 0.00 0.00 1.52
1737 1848 3.615351 CGCCATGGTTTTCGGGTTTAAAT 60.615 43.478 14.67 0.00 0.00 1.40
1738 1849 4.380655 CGCCATGGTTTTCGGGTTTAAATA 60.381 41.667 14.67 0.00 0.00 1.40
1761 1880 0.243907 TAGTTCTGTGAGCTGCGGAC 59.756 55.000 0.00 0.00 0.00 4.79
1786 1905 4.827835 GTGGGCTAAGTCTTTCCTTCTTTT 59.172 41.667 0.00 0.00 0.00 2.27
1787 1906 6.002082 GTGGGCTAAGTCTTTCCTTCTTTTA 58.998 40.000 0.00 0.00 0.00 1.52
1852 1973 3.953612 TGGATTTGGATTAGGTGTCATGC 59.046 43.478 0.00 0.00 0.00 4.06
1950 2075 5.237048 GTTTTTAGCCTTCAAATGCATGGA 58.763 37.500 0.00 0.00 0.00 3.41
1969 2094 4.515361 TGGACGACCTAAAAGTTGTTTCA 58.485 39.130 5.33 0.00 34.40 2.69
2001 2126 8.838009 CGTAATGCGTAGTTCTATATGTACAAG 58.162 37.037 0.00 0.00 35.54 3.16
2132 2258 1.367346 TATCAGTTCCCCTTGTGGCA 58.633 50.000 0.00 0.00 0.00 4.92
2138 2264 2.849943 AGTTCCCCTTGTGGCATATGTA 59.150 45.455 4.29 0.00 0.00 2.29
2220 2346 6.311935 GGAGTTGTTTTGGGTTTTAACAGTTC 59.688 38.462 0.00 0.00 33.74 3.01
2398 2524 0.729690 GGAGCAAGCGTGGATCTTTC 59.270 55.000 0.79 0.00 0.00 2.62
2407 2534 6.611381 CAAGCGTGGATCTTTCTTTTATTGA 58.389 36.000 0.00 0.00 0.00 2.57
2452 2579 4.832266 TGGGCCACCATAATTAGCTTTATG 59.168 41.667 0.00 10.13 43.37 1.90
2583 2891 3.096092 TCCCCCTTTATTTGTGATGCAC 58.904 45.455 0.00 0.00 34.56 4.57
2597 2905 2.553602 TGATGCACTTGTTGTTAGCAGG 59.446 45.455 0.00 0.00 38.75 4.85
2661 2969 9.699703 AGACTGTTTTCTTAGAATCTGACTTAC 57.300 33.333 0.00 0.00 0.00 2.34
2715 3023 6.746822 TGACAAAGTTGCGATAATGCTTAATG 59.253 34.615 0.00 0.00 35.36 1.90
2821 3130 4.399934 TGGTTGTTTGGTACTTTGGACTTC 59.600 41.667 0.00 0.00 0.00 3.01
2885 3194 3.010420 GGAAGACAATTGCAGTAGGGAC 58.990 50.000 5.05 0.00 0.00 4.46
2886 3195 3.307762 GGAAGACAATTGCAGTAGGGACT 60.308 47.826 5.05 0.00 46.37 3.85
2887 3196 4.081087 GGAAGACAATTGCAGTAGGGACTA 60.081 45.833 5.05 0.00 41.75 2.59
2889 3198 3.452627 AGACAATTGCAGTAGGGACTAGG 59.547 47.826 5.05 0.00 44.14 3.02
2890 3199 2.505819 ACAATTGCAGTAGGGACTAGGG 59.494 50.000 5.05 0.00 44.14 3.53
2891 3200 2.771943 CAATTGCAGTAGGGACTAGGGA 59.228 50.000 0.00 0.00 44.14 4.20
2892 3201 2.160721 TTGCAGTAGGGACTAGGGAG 57.839 55.000 0.00 0.00 44.14 4.30
2896 3205 3.105283 GCAGTAGGGACTAGGGAGAAAA 58.895 50.000 0.00 0.00 44.14 2.29
3009 3318 3.712187 GTCATCAAGACACTAGCTAGCC 58.288 50.000 20.91 10.12 46.77 3.93
3068 3377 4.497300 CAAGTTGGCGAAATCAATGGAAT 58.503 39.130 0.00 0.00 0.00 3.01
3120 3429 0.318441 CAAGGTCTCTGCAGTCGGAA 59.682 55.000 14.67 0.00 0.00 4.30
3176 3485 1.244019 GCAAAACCGCTGGACCAGAT 61.244 55.000 26.25 6.60 32.44 2.90
3405 3714 7.094463 GGATCTTGATTGTGACTTGTTCTGAAT 60.094 37.037 0.00 0.00 0.00 2.57
3408 3717 6.940831 TGATTGTGACTTGTTCTGAATGAA 57.059 33.333 0.00 0.00 0.00 2.57
3458 3769 2.360801 GACTGGCTTGTTTGGCTTTGTA 59.639 45.455 0.00 0.00 0.00 2.41
3492 3803 0.178992 TTCCTGTCTGGCTGTTTGGG 60.179 55.000 0.00 0.00 35.26 4.12
3573 3884 5.262009 GGGCAAATAAAAACTACTCCCTCT 58.738 41.667 0.00 0.00 0.00 3.69
3575 3886 5.393135 GGCAAATAAAAACTACTCCCTCTGC 60.393 44.000 0.00 0.00 0.00 4.26
3587 3898 2.711009 CTCCCTCTGCCCCATAATGTAA 59.289 50.000 0.00 0.00 0.00 2.41
3588 3899 2.711009 TCCCTCTGCCCCATAATGTAAG 59.289 50.000 0.00 0.00 0.00 2.34
3589 3900 2.711009 CCCTCTGCCCCATAATGTAAGA 59.289 50.000 0.00 0.00 0.00 2.10
3592 3903 2.769663 TCTGCCCCATAATGTAAGACGT 59.230 45.455 0.00 0.00 0.00 4.34
3593 3904 3.199071 TCTGCCCCATAATGTAAGACGTT 59.801 43.478 0.00 0.00 0.00 3.99
3594 3905 3.945285 CTGCCCCATAATGTAAGACGTTT 59.055 43.478 0.00 0.00 0.00 3.60
3595 3906 4.337145 TGCCCCATAATGTAAGACGTTTT 58.663 39.130 0.00 0.00 0.00 2.43
3596 3907 4.767928 TGCCCCATAATGTAAGACGTTTTT 59.232 37.500 0.00 0.00 0.00 1.94
3649 3960 2.077687 TTATGGGACGGAGGGAGTAC 57.922 55.000 0.00 0.00 0.00 2.73
3660 3971 3.243724 GGAGGGAGTACATAGAAGCCAT 58.756 50.000 0.00 0.00 0.00 4.40
3662 3973 4.838986 GGAGGGAGTACATAGAAGCCATTA 59.161 45.833 0.00 0.00 0.00 1.90
3696 4007 5.833082 TCTTCTCTTTCAGTGTGTCTGTAC 58.167 41.667 0.00 0.00 43.97 2.90
3718 4029 0.907704 ACCCCCTGTATCAAGCGTGA 60.908 55.000 4.40 4.40 38.41 4.35
3800 4111 8.821686 ATGTCCCACATGTCATAGATTTAAAA 57.178 30.769 0.00 0.00 37.45 1.52
3801 4112 8.821686 TGTCCCACATGTCATAGATTTAAAAT 57.178 30.769 0.00 0.00 0.00 1.82
3820 4131 8.575649 TTAAAATACTCTCAGAACAAATCCCC 57.424 34.615 0.00 0.00 0.00 4.81
3821 4132 6.394345 AAATACTCTCAGAACAAATCCCCT 57.606 37.500 0.00 0.00 0.00 4.79
3822 4133 7.510675 AAATACTCTCAGAACAAATCCCCTA 57.489 36.000 0.00 0.00 0.00 3.53
3824 4135 3.195825 ACTCTCAGAACAAATCCCCTACG 59.804 47.826 0.00 0.00 0.00 3.51
3825 4136 2.500098 TCTCAGAACAAATCCCCTACGG 59.500 50.000 0.00 0.00 0.00 4.02
3856 4202 4.718774 TCCATGCCCCTCTAGAATATGATC 59.281 45.833 0.00 0.00 0.00 2.92
3876 4222 4.795970 TCTTTTCTGTCGCTTGTTCTTC 57.204 40.909 0.00 0.00 0.00 2.87
3907 4253 5.694910 ACTTTGTTATACAACCGTCTGTGAG 59.305 40.000 0.00 0.00 37.90 3.51
3972 4318 7.541162 TCTGATCAAAATCTTTTGCACATAGG 58.459 34.615 9.94 3.36 45.35 2.57
3977 4323 4.660789 AATCTTTTGCACATAGGATGCC 57.339 40.909 0.00 0.00 42.69 4.40
4008 4355 8.570488 TGCTTTATCTGCATAATATTGAACCTG 58.430 33.333 0.00 0.00 35.31 4.00
4013 4360 7.792374 TCTGCATAATATTGAACCTGTCTTC 57.208 36.000 0.00 0.00 0.00 2.87
4025 4372 3.041946 ACCTGTCTTCCTTTCAGTCACT 58.958 45.455 0.00 0.00 0.00 3.41
4026 4373 3.181461 ACCTGTCTTCCTTTCAGTCACTG 60.181 47.826 0.00 0.00 0.00 3.66
4033 4380 3.728845 TCCTTTCAGTCACTGCAACTAC 58.271 45.455 0.00 0.00 0.00 2.73
4035 4382 3.495100 CCTTTCAGTCACTGCAACTACCT 60.495 47.826 0.00 0.00 0.00 3.08
4038 4385 3.763057 TCAGTCACTGCAACTACCTCTA 58.237 45.455 0.00 0.00 0.00 2.43
4040 4387 4.399618 TCAGTCACTGCAACTACCTCTATC 59.600 45.833 0.00 0.00 0.00 2.08
4045 4394 4.400884 CACTGCAACTACCTCTATCTGTCT 59.599 45.833 0.00 0.00 0.00 3.41
4047 4396 3.628032 TGCAACTACCTCTATCTGTCTCG 59.372 47.826 0.00 0.00 0.00 4.04
4053 4402 4.425180 ACCTCTATCTGTCTCGAGCTTA 57.575 45.455 7.81 0.00 0.00 3.09
4055 4404 6.116711 ACCTCTATCTGTCTCGAGCTTATA 57.883 41.667 7.81 2.38 0.00 0.98
4130 4480 6.762333 TCAGAGAGAATCAGAACATTGTTGA 58.238 36.000 6.80 0.00 37.82 3.18
4131 4481 7.392418 TCAGAGAGAATCAGAACATTGTTGAT 58.608 34.615 6.80 2.44 37.82 2.57
4165 4515 4.959839 GGGAGATCCTTATCAGGGACTATC 59.040 50.000 0.00 0.00 41.25 2.08
4177 4527 2.894126 AGGGACTATCTAACATCCGCAG 59.106 50.000 0.00 0.00 36.02 5.18
4190 4540 2.084610 TCCGCAGTTTCATCAGACTG 57.915 50.000 0.00 0.00 44.67 3.51
4400 4762 4.336280 GAACCTAAAACCTGATGCCTTCT 58.664 43.478 0.00 0.00 0.00 2.85
4588 4952 4.579869 CAACTGGTAACCAAGCTATGAGT 58.420 43.478 0.00 0.00 30.80 3.41
4627 4991 1.002921 ACGTGGAGATGGATGGGGA 59.997 57.895 0.00 0.00 0.00 4.81
4696 5060 3.300934 ATGGAAGCAGCGCACTCGA 62.301 57.895 11.47 0.00 38.10 4.04
4758 5122 4.062677 ACGGTTGAACAAGCAGTTACTA 57.937 40.909 15.21 0.00 41.51 1.82
4759 5123 4.444536 ACGGTTGAACAAGCAGTTACTAA 58.555 39.130 15.21 0.00 41.51 2.24
4774 5138 7.668886 AGCAGTTACTAACCTTCTTAGTGACTA 59.331 37.037 14.04 0.00 44.65 2.59
4959 5331 6.945218 AGAATTTATGGGTATGCTGCAAAAA 58.055 32.000 6.36 0.00 0.00 1.94
5044 5416 5.237127 ACACAAGCACCATACAATATCATCG 59.763 40.000 0.00 0.00 0.00 3.84
5058 5430 6.256539 ACAATATCATCGTCTTTGCAGTACAG 59.743 38.462 0.00 0.00 0.00 2.74
5159 5534 7.332430 TGATTTGCCAGATGATTTGTTGATTTC 59.668 33.333 0.00 0.00 0.00 2.17
5323 6447 1.355005 GGAGAAGCAGAAGTCGAAGC 58.645 55.000 0.00 0.00 0.00 3.86
5639 6763 1.497161 ACCCCGAAGAGATTACAGGG 58.503 55.000 0.00 0.00 39.09 4.45
5974 7098 4.155826 CGCACACCAAGAGGAAATTATTCA 59.844 41.667 0.00 0.00 37.29 2.57
6047 7171 3.519510 CAGAGATGACAGGGAAAACCCTA 59.480 47.826 7.53 0.00 41.63 3.53
6182 7306 2.403259 GGCGAAACAAACCTGAAATGG 58.597 47.619 0.00 0.00 0.00 3.16
6206 7330 2.860136 GCTTCAAAACAGCCACAGTTTC 59.140 45.455 0.00 0.00 38.17 2.78
6271 7395 5.079998 AGGTATCTGACATGGATGGTCTA 57.920 43.478 0.00 0.00 36.26 2.59
6478 7602 2.053627 CAACCGCATGAAAGCAACTTC 58.946 47.619 0.00 0.00 0.00 3.01
6593 7717 0.751452 CTCAGCTCCTAGCATGCAGA 59.249 55.000 21.98 12.44 45.56 4.26
6594 7718 1.138464 CTCAGCTCCTAGCATGCAGAA 59.862 52.381 21.98 3.70 45.56 3.02
6595 7719 1.767088 TCAGCTCCTAGCATGCAGAAT 59.233 47.619 21.98 0.61 45.56 2.40
6596 7720 2.144730 CAGCTCCTAGCATGCAGAATC 58.855 52.381 21.98 8.07 45.56 2.52
6597 7721 1.767088 AGCTCCTAGCATGCAGAATCA 59.233 47.619 21.98 0.00 45.56 2.57
6598 7722 2.144730 GCTCCTAGCATGCAGAATCAG 58.855 52.381 21.98 8.61 41.89 2.90
6599 7723 2.144730 CTCCTAGCATGCAGAATCAGC 58.855 52.381 21.98 0.00 0.00 4.26
6600 7724 1.202734 TCCTAGCATGCAGAATCAGCC 60.203 52.381 21.98 0.00 0.00 4.85
6601 7725 1.476291 CCTAGCATGCAGAATCAGCCA 60.476 52.381 21.98 0.00 0.00 4.75
6602 7726 1.874231 CTAGCATGCAGAATCAGCCAG 59.126 52.381 21.98 0.00 0.00 4.85
6603 7727 0.034380 AGCATGCAGAATCAGCCAGT 60.034 50.000 21.98 0.00 0.00 4.00
6604 7728 1.211212 AGCATGCAGAATCAGCCAGTA 59.789 47.619 21.98 0.00 0.00 2.74
6605 7729 1.602851 GCATGCAGAATCAGCCAGTAG 59.397 52.381 14.21 0.00 0.00 2.57
6606 7730 1.602851 CATGCAGAATCAGCCAGTAGC 59.397 52.381 0.00 0.00 44.25 3.58
6616 7740 1.068921 GCCAGTAGCAGCTCCTAGC 59.931 63.158 0.00 0.00 42.97 3.42
6617 7741 1.680522 GCCAGTAGCAGCTCCTAGCA 61.681 60.000 0.00 0.00 45.56 3.49
6618 7742 1.047002 CCAGTAGCAGCTCCTAGCAT 58.953 55.000 0.00 0.00 45.56 3.79
6619 7743 1.270199 CCAGTAGCAGCTCCTAGCATG 60.270 57.143 0.00 0.00 45.56 4.06
6620 7744 0.392336 AGTAGCAGCTCCTAGCATGC 59.608 55.000 10.51 10.51 45.56 4.06
6621 7745 0.105593 GTAGCAGCTCCTAGCATGCA 59.894 55.000 21.98 5.01 45.56 3.96
6622 7746 0.391966 TAGCAGCTCCTAGCATGCAG 59.608 55.000 21.98 14.61 45.56 4.41
6721 7845 9.369904 GCATTTAATGGACATAATTTCAGTGTT 57.630 29.630 7.08 0.00 0.00 3.32
6735 7859 2.092968 TCAGTGTTGCTGGTCAAGTTCT 60.093 45.455 0.00 0.00 45.08 3.01
6850 7974 2.200373 ACACACATAGTTTCCAGCCC 57.800 50.000 0.00 0.00 0.00 5.19
6958 8082 1.080569 CGCACACAATTTCCAGCCC 60.081 57.895 0.00 0.00 0.00 5.19
7375 8532 1.673033 GCTGCGACATCAGTGGTTACT 60.673 52.381 0.00 0.00 37.75 2.24
7408 8565 6.597280 AGGCTGCAGAAAATAAGAAAGTAGAG 59.403 38.462 20.43 0.00 0.00 2.43
7435 8592 1.143305 CCAAAGATAGCGATGGCGAG 58.857 55.000 0.00 0.00 46.35 5.03
7444 8601 1.522355 CGATGGCGAGCAAGATGGT 60.522 57.895 0.00 0.00 40.82 3.55
7621 8778 2.459421 AAGTCACGAGCACGGTCGAG 62.459 60.000 23.80 16.45 42.85 4.04
7710 8867 1.254954 GTACAGGTATAGCCCCCTCG 58.745 60.000 0.00 0.00 38.26 4.63
7711 8868 0.113776 TACAGGTATAGCCCCCTCGG 59.886 60.000 0.00 0.00 38.26 4.63
7727 8884 2.202946 GGCCGCTCTTACTCCTGC 60.203 66.667 0.00 0.00 0.00 4.85
7970 9131 3.770666 CCTCGTGTTGTATCATCGTCTT 58.229 45.455 0.00 0.00 0.00 3.01
8177 9346 4.394439 TGGTTGTTTGTTTCTTTAGCCC 57.606 40.909 0.00 0.00 0.00 5.19
8205 9374 3.760151 TCTGAAGGAAATTGCCTGACATG 59.240 43.478 5.47 4.80 38.58 3.21
8209 9378 3.233507 AGGAAATTGCCTGACATGTGTT 58.766 40.909 3.34 0.00 36.76 3.32
8221 9390 1.973515 ACATGTGTTGAGGAGAGAGCA 59.026 47.619 0.00 0.00 0.00 4.26
8227 9396 4.567385 GAGGAGAGAGCAGCGCCG 62.567 72.222 2.29 0.00 0.00 6.46
8242 9411 0.595567 CGCCGGCGCTTACTGTTATA 60.596 55.000 38.48 0.00 0.00 0.98
8243 9412 0.857287 GCCGGCGCTTACTGTTATAC 59.143 55.000 12.58 0.00 0.00 1.47
8245 9414 2.391879 CCGGCGCTTACTGTTATACTC 58.608 52.381 7.64 0.00 0.00 2.59
8246 9415 2.391879 CGGCGCTTACTGTTATACTCC 58.608 52.381 7.64 0.00 0.00 3.85
8247 9416 2.034305 CGGCGCTTACTGTTATACTCCT 59.966 50.000 7.64 0.00 0.00 3.69
8248 9417 3.251729 CGGCGCTTACTGTTATACTCCTA 59.748 47.826 7.64 0.00 0.00 2.94
8249 9418 4.082895 CGGCGCTTACTGTTATACTCCTAT 60.083 45.833 7.64 0.00 0.00 2.57
8250 9419 5.564259 CGGCGCTTACTGTTATACTCCTATT 60.564 44.000 7.64 0.00 0.00 1.73
8251 9420 6.221659 GGCGCTTACTGTTATACTCCTATTT 58.778 40.000 7.64 0.00 0.00 1.40
8252 9421 6.145696 GGCGCTTACTGTTATACTCCTATTTG 59.854 42.308 7.64 0.00 0.00 2.32
8253 9422 6.145696 GCGCTTACTGTTATACTCCTATTTGG 59.854 42.308 0.00 0.00 37.10 3.28
8254 9423 7.208080 CGCTTACTGTTATACTCCTATTTGGT 58.792 38.462 0.00 0.00 37.07 3.67
8255 9424 8.355169 CGCTTACTGTTATACTCCTATTTGGTA 58.645 37.037 0.00 0.00 37.07 3.25
8260 9429 9.275572 ACTGTTATACTCCTATTTGGTAAAGGA 57.724 33.333 0.00 0.00 37.07 3.36
8261 9430 9.543783 CTGTTATACTCCTATTTGGTAAAGGAC 57.456 37.037 0.00 0.00 34.46 3.85
8268 9437 5.254267 TCCTATTTGGTAAAGGACAATGGGA 59.746 40.000 0.00 0.00 34.46 4.37
8281 9450 9.547279 AAAGGACAATGGGAGAAAATAAATACT 57.453 29.630 0.00 0.00 0.00 2.12
8282 9451 8.753497 AGGACAATGGGAGAAAATAAATACTC 57.247 34.615 0.00 0.00 0.00 2.59
8283 9452 7.780271 AGGACAATGGGAGAAAATAAATACTCC 59.220 37.037 0.00 0.00 45.50 3.85
8291 9460 6.993308 GGAGAAAATAAATACTCCCTCTGTCC 59.007 42.308 0.00 0.00 41.89 4.02
8292 9461 6.901300 AGAAAATAAATACTCCCTCTGTCCC 58.099 40.000 0.00 0.00 0.00 4.46
8293 9462 6.447084 AGAAAATAAATACTCCCTCTGTCCCA 59.553 38.462 0.00 0.00 0.00 4.37
8294 9463 6.652205 AAATAAATACTCCCTCTGTCCCAA 57.348 37.500 0.00 0.00 0.00 4.12
8295 9464 6.652205 AATAAATACTCCCTCTGTCCCAAA 57.348 37.500 0.00 0.00 0.00 3.28
8296 9465 6.652205 ATAAATACTCCCTCTGTCCCAAAA 57.348 37.500 0.00 0.00 0.00 2.44
8297 9466 5.536497 AAATACTCCCTCTGTCCCAAAAT 57.464 39.130 0.00 0.00 0.00 1.82
8298 9467 6.652205 AAATACTCCCTCTGTCCCAAAATA 57.348 37.500 0.00 0.00 0.00 1.40
8299 9468 6.652205 AATACTCCCTCTGTCCCAAAATAA 57.348 37.500 0.00 0.00 0.00 1.40
8300 9469 4.302559 ACTCCCTCTGTCCCAAAATAAC 57.697 45.455 0.00 0.00 0.00 1.89
8301 9470 3.916989 ACTCCCTCTGTCCCAAAATAACT 59.083 43.478 0.00 0.00 0.00 2.24
8302 9471 4.263506 ACTCCCTCTGTCCCAAAATAACTG 60.264 45.833 0.00 0.00 0.00 3.16
8303 9472 3.655777 TCCCTCTGTCCCAAAATAACTGT 59.344 43.478 0.00 0.00 0.00 3.55
8304 9473 4.010349 CCCTCTGTCCCAAAATAACTGTC 58.990 47.826 0.00 0.00 0.00 3.51
8305 9474 4.263506 CCCTCTGTCCCAAAATAACTGTCT 60.264 45.833 0.00 0.00 0.00 3.41
8306 9475 4.938226 CCTCTGTCCCAAAATAACTGTCTC 59.062 45.833 0.00 0.00 0.00 3.36
8307 9476 5.513094 CCTCTGTCCCAAAATAACTGTCTCA 60.513 44.000 0.00 0.00 0.00 3.27
8308 9477 5.935945 TCTGTCCCAAAATAACTGTCTCAA 58.064 37.500 0.00 0.00 0.00 3.02
8309 9478 5.997746 TCTGTCCCAAAATAACTGTCTCAAG 59.002 40.000 0.00 0.00 0.00 3.02
8310 9479 4.518970 TGTCCCAAAATAACTGTCTCAAGC 59.481 41.667 0.00 0.00 0.00 4.01
8311 9480 4.762251 GTCCCAAAATAACTGTCTCAAGCT 59.238 41.667 0.00 0.00 0.00 3.74
8312 9481 5.241728 GTCCCAAAATAACTGTCTCAAGCTT 59.758 40.000 0.00 0.00 0.00 3.74
8313 9482 6.430000 GTCCCAAAATAACTGTCTCAAGCTTA 59.570 38.462 0.00 0.00 0.00 3.09
8314 9483 6.655003 TCCCAAAATAACTGTCTCAAGCTTAG 59.345 38.462 0.00 0.00 0.00 2.18
8315 9484 6.431234 CCCAAAATAACTGTCTCAAGCTTAGT 59.569 38.462 0.00 0.00 0.00 2.24
8316 9485 7.606456 CCCAAAATAACTGTCTCAAGCTTAGTA 59.394 37.037 0.00 0.00 0.00 1.82
8317 9486 8.443937 CCAAAATAACTGTCTCAAGCTTAGTAC 58.556 37.037 0.00 0.00 0.00 2.73
8318 9487 8.988934 CAAAATAACTGTCTCAAGCTTAGTACA 58.011 33.333 0.00 2.68 0.00 2.90
8319 9488 9.555727 AAAATAACTGTCTCAAGCTTAGTACAA 57.444 29.630 0.00 0.00 0.00 2.41
8320 9489 9.555727 AAATAACTGTCTCAAGCTTAGTACAAA 57.444 29.630 0.00 0.00 0.00 2.83
8321 9490 9.726438 AATAACTGTCTCAAGCTTAGTACAAAT 57.274 29.630 0.00 0.00 0.00 2.32
8322 9491 9.726438 ATAACTGTCTCAAGCTTAGTACAAATT 57.274 29.630 0.00 4.14 0.00 1.82
8323 9492 8.451908 AACTGTCTCAAGCTTAGTACAAATTT 57.548 30.769 0.00 0.00 0.00 1.82
8324 9493 7.865707 ACTGTCTCAAGCTTAGTACAAATTTG 58.134 34.615 16.67 16.67 0.00 2.32
8325 9494 7.499232 ACTGTCTCAAGCTTAGTACAAATTTGT 59.501 33.333 25.99 25.99 44.86 2.83
8326 9495 8.896320 TGTCTCAAGCTTAGTACAAATTTGTA 57.104 30.769 23.91 23.91 42.35 2.41
8352 9521 9.635404 ACTAGAGCTAGTATAAAGTTGAGACAT 57.365 33.333 8.35 0.00 43.98 3.06
8366 9535 7.133891 AGTTGAGACATTTATTTTGAGACGG 57.866 36.000 0.00 0.00 0.00 4.79
8367 9536 6.934645 AGTTGAGACATTTATTTTGAGACGGA 59.065 34.615 0.00 0.00 0.00 4.69
8368 9537 6.968131 TGAGACATTTATTTTGAGACGGAG 57.032 37.500 0.00 0.00 0.00 4.63
8372 9541 4.396166 ACATTTATTTTGAGACGGAGGCAG 59.604 41.667 0.00 0.00 0.00 4.85
8375 9544 3.695830 ATTTTGAGACGGAGGCAGTAA 57.304 42.857 0.00 0.00 0.00 2.24
8384 9553 0.322546 GGAGGCAGTAAGTTGTGGGG 60.323 60.000 0.00 0.00 0.00 4.96
8426 9595 1.135721 CCGTGCTGTCTGATGATCTGA 59.864 52.381 0.00 0.00 0.00 3.27
8532 9701 0.179100 GCTTATCTGCTGCTGGTCGA 60.179 55.000 6.69 0.00 0.00 4.20
8539 9708 3.699894 CTGCTGGTCGAGGCACCT 61.700 66.667 3.92 0.00 37.34 4.00
8540 9709 3.241530 TGCTGGTCGAGGCACCTT 61.242 61.111 3.92 0.00 37.34 3.50
8542 9711 2.035442 GCTGGTCGAGGCACCTTTC 61.035 63.158 0.00 0.00 37.34 2.62
8548 9719 1.738099 CGAGGCACCTTTCTGTCCG 60.738 63.158 0.00 0.00 0.00 4.79
8555 9726 2.833794 CACCTTTCTGTCCGTCTCAAA 58.166 47.619 0.00 0.00 0.00 2.69
8582 9753 1.070134 TCTCAAAGGGACCGACTGTTG 59.930 52.381 0.00 0.00 0.00 3.33
8586 9757 1.426751 AAGGGACCGACTGTTGGTAA 58.573 50.000 19.57 0.00 40.63 2.85
8589 9760 1.337541 GGGACCGACTGTTGGTAAGTC 60.338 57.143 19.57 7.33 40.63 3.01
8617 9788 9.815936 CCTGAAATTTTATTTTGCAAGTTGATC 57.184 29.630 7.16 0.00 0.00 2.92
8638 9809 7.679783 TGATCTTCTGAACTGTTGGATTAAGA 58.320 34.615 0.00 0.88 0.00 2.10
8668 9844 4.895297 TGCCATTCTTGTTTCTTCTTCCTT 59.105 37.500 0.00 0.00 0.00 3.36
8669 9845 6.068010 TGCCATTCTTGTTTCTTCTTCCTTA 58.932 36.000 0.00 0.00 0.00 2.69
8671 9847 7.069331 TGCCATTCTTGTTTCTTCTTCCTTAAA 59.931 33.333 0.00 0.00 0.00 1.52
8672 9848 7.596621 GCCATTCTTGTTTCTTCTTCCTTAAAG 59.403 37.037 0.00 0.00 36.22 1.85
8673 9849 7.596621 CCATTCTTGTTTCTTCTTCCTTAAAGC 59.403 37.037 0.00 0.00 34.76 3.51
8675 9851 7.881775 TCTTGTTTCTTCTTCCTTAAAGCTT 57.118 32.000 0.00 0.00 34.76 3.74
8676 9852 8.293699 TCTTGTTTCTTCTTCCTTAAAGCTTT 57.706 30.769 17.30 17.30 34.76 3.51
8677 9853 8.406297 TCTTGTTTCTTCTTCCTTAAAGCTTTC 58.594 33.333 16.57 0.00 34.76 2.62
8679 9855 8.293699 TGTTTCTTCTTCCTTAAAGCTTTCTT 57.706 30.769 16.57 0.00 34.76 2.52
8681 9857 7.511959 TTCTTCTTCCTTAAAGCTTTCTTCC 57.488 36.000 16.57 0.00 34.76 3.46
8685 9861 2.719705 TCCTTAAAGCTTTCTTCCCCCA 59.280 45.455 16.57 0.00 0.00 4.96
8686 9862 3.336694 TCCTTAAAGCTTTCTTCCCCCAT 59.663 43.478 16.57 0.00 0.00 4.00
8688 9864 4.081476 CCTTAAAGCTTTCTTCCCCCATTG 60.081 45.833 16.57 0.00 0.00 2.82
8689 9865 1.269958 AAGCTTTCTTCCCCCATTGC 58.730 50.000 0.00 0.00 0.00 3.56
8690 9866 0.411058 AGCTTTCTTCCCCCATTGCT 59.589 50.000 0.00 0.00 0.00 3.91
8691 9867 1.203225 AGCTTTCTTCCCCCATTGCTT 60.203 47.619 0.00 0.00 0.00 3.91
8692 9868 1.066645 GCTTTCTTCCCCCATTGCTTG 60.067 52.381 0.00 0.00 0.00 4.01
8693 9869 0.975887 TTTCTTCCCCCATTGCTTGC 59.024 50.000 0.00 0.00 0.00 4.01
8694 9870 0.904394 TTCTTCCCCCATTGCTTGCC 60.904 55.000 0.00 0.00 0.00 4.52
8695 9871 1.305549 CTTCCCCCATTGCTTGCCT 60.306 57.895 0.00 0.00 0.00 4.75
8696 9872 1.305213 TTCCCCCATTGCTTGCCTC 60.305 57.895 0.00 0.00 0.00 4.70
8697 9873 2.761213 CCCCCATTGCTTGCCTCC 60.761 66.667 0.00 0.00 0.00 4.30
8698 9874 3.142838 CCCCATTGCTTGCCTCCG 61.143 66.667 0.00 0.00 0.00 4.63
8699 9875 3.142838 CCCATTGCTTGCCTCCGG 61.143 66.667 0.00 0.00 0.00 5.14
8709 9885 3.231298 GCCTCCGGCTCACCTATT 58.769 61.111 0.00 0.00 46.69 1.73
8710 9886 1.227674 GCCTCCGGCTCACCTATTG 60.228 63.158 0.00 0.00 46.69 1.90
8711 9887 1.972660 GCCTCCGGCTCACCTATTGT 61.973 60.000 0.00 0.00 46.69 2.71
8712 9888 0.105039 CCTCCGGCTCACCTATTGTC 59.895 60.000 0.00 0.00 0.00 3.18
8713 9889 0.105039 CTCCGGCTCACCTATTGTCC 59.895 60.000 0.00 0.00 0.00 4.02
8714 9890 0.325296 TCCGGCTCACCTATTGTCCT 60.325 55.000 0.00 0.00 0.00 3.85
8715 9891 0.541863 CCGGCTCACCTATTGTCCTT 59.458 55.000 0.00 0.00 0.00 3.36
8716 9892 1.656652 CGGCTCACCTATTGTCCTTG 58.343 55.000 0.00 0.00 0.00 3.61
8717 9893 1.383523 GGCTCACCTATTGTCCTTGC 58.616 55.000 0.00 0.00 0.00 4.01
8718 9894 1.383523 GCTCACCTATTGTCCTTGCC 58.616 55.000 0.00 0.00 0.00 4.52
8719 9895 1.065126 GCTCACCTATTGTCCTTGCCT 60.065 52.381 0.00 0.00 0.00 4.75
8720 9896 2.911484 CTCACCTATTGTCCTTGCCTC 58.089 52.381 0.00 0.00 0.00 4.70
8721 9897 2.503356 CTCACCTATTGTCCTTGCCTCT 59.497 50.000 0.00 0.00 0.00 3.69
8722 9898 2.237143 TCACCTATTGTCCTTGCCTCTG 59.763 50.000 0.00 0.00 0.00 3.35
8723 9899 1.561542 ACCTATTGTCCTTGCCTCTGG 59.438 52.381 0.00 0.00 0.00 3.86
8739 9915 2.263540 GGCGAGGCCGTTGTCTAA 59.736 61.111 0.00 0.00 39.62 2.10
8740 9916 2.098831 GGCGAGGCCGTTGTCTAAC 61.099 63.158 0.00 0.00 39.62 2.34
8741 9917 1.080025 GCGAGGCCGTTGTCTAACT 60.080 57.895 0.00 0.00 38.24 2.24
8742 9918 1.077089 GCGAGGCCGTTGTCTAACTC 61.077 60.000 0.00 0.00 38.24 3.01
8743 9919 0.797249 CGAGGCCGTTGTCTAACTCG 60.797 60.000 0.00 0.00 34.60 4.18
8744 9920 0.524862 GAGGCCGTTGTCTAACTCGA 59.475 55.000 0.00 0.00 34.60 4.04
8745 9921 0.526662 AGGCCGTTGTCTAACTCGAG 59.473 55.000 11.84 11.84 34.60 4.04
8746 9922 1.077089 GGCCGTTGTCTAACTCGAGC 61.077 60.000 13.61 0.00 34.60 5.03
8747 9923 0.388134 GCCGTTGTCTAACTCGAGCA 60.388 55.000 13.61 0.00 34.60 4.26
8748 9924 1.618861 CCGTTGTCTAACTCGAGCAG 58.381 55.000 13.61 10.36 34.60 4.24
8749 9925 1.618861 CGTTGTCTAACTCGAGCAGG 58.381 55.000 13.61 2.41 34.60 4.85
8750 9926 1.199327 CGTTGTCTAACTCGAGCAGGA 59.801 52.381 13.61 5.01 34.60 3.86
8751 9927 2.351447 CGTTGTCTAACTCGAGCAGGAA 60.351 50.000 13.61 4.43 34.60 3.36
8752 9928 3.673594 CGTTGTCTAACTCGAGCAGGAAT 60.674 47.826 13.61 0.00 34.60 3.01
8753 9929 3.784701 TGTCTAACTCGAGCAGGAATC 57.215 47.619 13.61 0.00 0.00 2.52
8754 9930 3.089284 TGTCTAACTCGAGCAGGAATCA 58.911 45.455 13.61 0.88 0.00 2.57
8755 9931 3.509967 TGTCTAACTCGAGCAGGAATCAA 59.490 43.478 13.61 0.00 0.00 2.57
8756 9932 4.160439 TGTCTAACTCGAGCAGGAATCAAT 59.840 41.667 13.61 0.00 0.00 2.57
8757 9933 5.359860 TGTCTAACTCGAGCAGGAATCAATA 59.640 40.000 13.61 0.00 0.00 1.90
8758 9934 5.688176 GTCTAACTCGAGCAGGAATCAATAC 59.312 44.000 13.61 0.00 0.00 1.89
8759 9935 4.744795 AACTCGAGCAGGAATCAATACT 57.255 40.909 13.61 0.00 0.00 2.12
8760 9936 5.854010 AACTCGAGCAGGAATCAATACTA 57.146 39.130 13.61 0.00 0.00 1.82
8761 9937 5.854010 ACTCGAGCAGGAATCAATACTAA 57.146 39.130 13.61 0.00 0.00 2.24
8762 9938 6.412362 ACTCGAGCAGGAATCAATACTAAT 57.588 37.500 13.61 0.00 0.00 1.73
8763 9939 7.526142 ACTCGAGCAGGAATCAATACTAATA 57.474 36.000 13.61 0.00 0.00 0.98
8764 9940 7.598278 ACTCGAGCAGGAATCAATACTAATAG 58.402 38.462 13.61 0.00 0.00 1.73
8765 9941 6.925211 TCGAGCAGGAATCAATACTAATAGG 58.075 40.000 0.00 0.00 0.00 2.57
8766 9942 5.578727 CGAGCAGGAATCAATACTAATAGGC 59.421 44.000 0.00 0.00 0.00 3.93
8767 9943 6.439636 AGCAGGAATCAATACTAATAGGCA 57.560 37.500 0.00 0.00 0.00 4.75
8768 9944 6.234177 AGCAGGAATCAATACTAATAGGCAC 58.766 40.000 0.00 0.00 0.00 5.01
8769 9945 5.412904 GCAGGAATCAATACTAATAGGCACC 59.587 44.000 0.00 0.00 0.00 5.01
8770 9946 6.745474 GCAGGAATCAATACTAATAGGCACCT 60.745 42.308 0.00 0.00 0.00 4.00
8771 9947 7.527196 GCAGGAATCAATACTAATAGGCACCTA 60.527 40.741 0.00 0.00 0.00 3.08
8772 9948 8.543774 CAGGAATCAATACTAATAGGCACCTAT 58.456 37.037 3.23 3.23 40.63 2.57
8773 9949 8.763601 AGGAATCAATACTAATAGGCACCTATC 58.236 37.037 9.63 0.00 38.20 2.08
8774 9950 7.988028 GGAATCAATACTAATAGGCACCTATCC 59.012 40.741 9.63 0.00 38.20 2.59
8775 9951 8.686739 AATCAATACTAATAGGCACCTATCCT 57.313 34.615 9.63 0.00 38.20 3.24
8776 9952 7.719871 TCAATACTAATAGGCACCTATCCTC 57.280 40.000 9.63 0.00 38.20 3.71
8777 9953 7.246027 TCAATACTAATAGGCACCTATCCTCA 58.754 38.462 9.63 0.00 38.20 3.86
8778 9954 7.901322 TCAATACTAATAGGCACCTATCCTCAT 59.099 37.037 9.63 0.00 38.20 2.90
8779 9955 8.543774 CAATACTAATAGGCACCTATCCTCATT 58.456 37.037 9.63 5.52 38.20 2.57
8780 9956 6.365970 ACTAATAGGCACCTATCCTCATTG 57.634 41.667 9.63 0.00 38.20 2.82
8781 9957 4.647564 AATAGGCACCTATCCTCATTGG 57.352 45.455 9.63 0.00 38.20 3.16
8782 9958 1.898863 AGGCACCTATCCTCATTGGT 58.101 50.000 0.00 0.00 38.55 3.67
8783 9959 1.771255 AGGCACCTATCCTCATTGGTC 59.229 52.381 0.00 0.00 36.11 4.02
8784 9960 1.490490 GGCACCTATCCTCATTGGTCA 59.510 52.381 0.00 0.00 36.11 4.02
8785 9961 2.092429 GGCACCTATCCTCATTGGTCAA 60.092 50.000 0.00 0.00 36.11 3.18
8786 9962 2.945668 GCACCTATCCTCATTGGTCAAC 59.054 50.000 0.00 0.00 36.11 3.18
8787 9963 3.545703 CACCTATCCTCATTGGTCAACC 58.454 50.000 0.00 0.00 36.11 3.77
8788 9964 2.509964 ACCTATCCTCATTGGTCAACCC 59.490 50.000 0.00 0.00 33.21 4.11
8789 9965 2.780010 CCTATCCTCATTGGTCAACCCT 59.220 50.000 0.00 0.00 37.07 4.34
8790 9966 3.181450 CCTATCCTCATTGGTCAACCCTC 60.181 52.174 0.00 0.00 37.07 4.30
8791 9967 1.741028 TCCTCATTGGTCAACCCTCA 58.259 50.000 0.00 0.00 37.07 3.86
8792 9968 1.630369 TCCTCATTGGTCAACCCTCAG 59.370 52.381 0.00 0.00 37.07 3.35
8793 9969 1.630369 CCTCATTGGTCAACCCTCAGA 59.370 52.381 0.00 0.00 34.29 3.27
8794 9970 2.616510 CCTCATTGGTCAACCCTCAGAC 60.617 54.545 0.00 0.00 34.29 3.51
8795 9971 2.304180 CTCATTGGTCAACCCTCAGACT 59.696 50.000 0.00 0.00 35.18 3.24
8796 9972 2.303022 TCATTGGTCAACCCTCAGACTC 59.697 50.000 0.00 0.00 35.18 3.36
8797 9973 0.679505 TTGGTCAACCCTCAGACTCG 59.320 55.000 0.00 0.00 35.18 4.18
8798 9974 1.079750 GGTCAACCCTCAGACTCGC 60.080 63.158 0.00 0.00 35.18 5.03
8799 9975 1.079750 GTCAACCCTCAGACTCGCC 60.080 63.158 0.00 0.00 0.00 5.54
8800 9976 1.228894 TCAACCCTCAGACTCGCCT 60.229 57.895 0.00 0.00 0.00 5.52
8801 9977 1.216710 CAACCCTCAGACTCGCCTC 59.783 63.158 0.00 0.00 0.00 4.70
8802 9978 1.985116 AACCCTCAGACTCGCCTCC 60.985 63.158 0.00 0.00 0.00 4.30
8803 9979 3.522731 CCCTCAGACTCGCCTCCG 61.523 72.222 0.00 0.00 0.00 4.63
8804 9980 4.200283 CCTCAGACTCGCCTCCGC 62.200 72.222 0.00 0.00 0.00 5.54
8805 9981 3.137459 CTCAGACTCGCCTCCGCT 61.137 66.667 0.00 0.00 0.00 5.52
8806 9982 2.676822 TCAGACTCGCCTCCGCTT 60.677 61.111 0.00 0.00 0.00 4.68
8807 9983 2.202676 CAGACTCGCCTCCGCTTC 60.203 66.667 0.00 0.00 0.00 3.86
8808 9984 2.676822 AGACTCGCCTCCGCTTCA 60.677 61.111 0.00 0.00 0.00 3.02
8809 9985 2.507324 GACTCGCCTCCGCTTCAC 60.507 66.667 0.00 0.00 0.00 3.18
8810 9986 3.991536 GACTCGCCTCCGCTTCACC 62.992 68.421 0.00 0.00 0.00 4.02
8811 9987 3.764466 CTCGCCTCCGCTTCACCT 61.764 66.667 0.00 0.00 0.00 4.00
8812 9988 2.361992 TCGCCTCCGCTTCACCTA 60.362 61.111 0.00 0.00 0.00 3.08
8813 9989 1.945354 CTCGCCTCCGCTTCACCTAA 61.945 60.000 0.00 0.00 0.00 2.69
8814 9990 1.144057 CGCCTCCGCTTCACCTAAT 59.856 57.895 0.00 0.00 0.00 1.73
8815 9991 1.154205 CGCCTCCGCTTCACCTAATG 61.154 60.000 0.00 0.00 0.00 1.90
8816 9992 0.107654 GCCTCCGCTTCACCTAATGT 60.108 55.000 0.00 0.00 0.00 2.71
8817 9993 1.941325 CCTCCGCTTCACCTAATGTC 58.059 55.000 0.00 0.00 0.00 3.06
8818 9994 1.473434 CCTCCGCTTCACCTAATGTCC 60.473 57.143 0.00 0.00 0.00 4.02
8819 9995 1.482593 CTCCGCTTCACCTAATGTCCT 59.517 52.381 0.00 0.00 0.00 3.85
8820 9996 1.480954 TCCGCTTCACCTAATGTCCTC 59.519 52.381 0.00 0.00 0.00 3.71
8821 9997 1.560923 CGCTTCACCTAATGTCCTCG 58.439 55.000 0.00 0.00 0.00 4.63
8822 9998 1.291132 GCTTCACCTAATGTCCTCGC 58.709 55.000 0.00 0.00 0.00 5.03
8823 9999 1.941325 CTTCACCTAATGTCCTCGCC 58.059 55.000 0.00 0.00 0.00 5.54
8824 10000 1.482593 CTTCACCTAATGTCCTCGCCT 59.517 52.381 0.00 0.00 0.00 5.52
8825 10001 1.112113 TCACCTAATGTCCTCGCCTC 58.888 55.000 0.00 0.00 0.00 4.70
8826 10002 1.115467 CACCTAATGTCCTCGCCTCT 58.885 55.000 0.00 0.00 0.00 3.69
8827 10003 2.092049 TCACCTAATGTCCTCGCCTCTA 60.092 50.000 0.00 0.00 0.00 2.43
8828 10004 2.294791 CACCTAATGTCCTCGCCTCTAG 59.705 54.545 0.00 0.00 0.00 2.43
8829 10005 1.271102 CCTAATGTCCTCGCCTCTAGC 59.729 57.143 0.00 0.00 38.52 3.42
8830 10006 1.957177 CTAATGTCCTCGCCTCTAGCA 59.043 52.381 0.00 0.00 44.04 3.49
8831 10007 1.195115 AATGTCCTCGCCTCTAGCAA 58.805 50.000 0.00 0.00 44.04 3.91
8832 10008 0.749649 ATGTCCTCGCCTCTAGCAAG 59.250 55.000 0.00 0.00 44.04 4.01
8833 10009 1.323271 TGTCCTCGCCTCTAGCAAGG 61.323 60.000 0.00 0.00 44.04 3.61
8834 10010 1.000486 TCCTCGCCTCTAGCAAGGT 60.000 57.895 0.00 0.00 44.04 3.50
8835 10011 0.614979 TCCTCGCCTCTAGCAAGGTT 60.615 55.000 0.00 0.00 44.04 3.50
8836 10012 0.460987 CCTCGCCTCTAGCAAGGTTG 60.461 60.000 0.00 0.00 44.04 3.77
8847 10023 6.128172 CCTCTAGCAAGGTTGTTGTCTAATTG 60.128 42.308 0.00 0.00 0.00 2.32
8860 11252 5.178096 TGTCTAATTGGAGCAGGAATCAA 57.822 39.130 0.00 0.00 0.00 2.57
8887 11279 3.717294 GCACCCACCCTCATCGGT 61.717 66.667 0.00 0.00 36.18 4.69
8916 11308 4.514577 CGCGCCTCCGGTTGAGAT 62.515 66.667 0.00 0.00 44.42 2.75
8917 11309 2.892425 GCGCCTCCGGTTGAGATG 60.892 66.667 0.00 0.00 44.42 2.90
8996 12101 8.925161 TTTTTCTTTTCTCATGAAATCAACGT 57.075 26.923 0.00 0.00 41.24 3.99
9023 12128 8.955388 ACCTAAATTGCAAATTCAAACAACTTT 58.045 25.926 1.71 0.00 0.00 2.66
9043 12148 8.685427 CAACTTTCATATAACCATTGTGGATCA 58.315 33.333 2.45 0.00 40.96 2.92
9076 12181 5.674525 ACCATTGATAGTGAGGTGTATGTG 58.325 41.667 0.00 0.00 0.00 3.21
9124 12229 7.592885 TGGTAACTTTAAGCGAGGTATCTAT 57.407 36.000 0.00 0.00 37.61 1.98
9137 12242 6.294564 GCGAGGTATCTATGATGACTTGGTTA 60.295 42.308 0.00 0.00 0.00 2.85
9206 12311 8.709386 TTTGCTCAAAACTTGCTAAAATTACA 57.291 26.923 0.00 0.00 0.00 2.41
9216 12321 8.225603 ACTTGCTAAAATTACATACTCCCATG 57.774 34.615 0.00 0.00 0.00 3.66
9217 12322 7.834181 ACTTGCTAAAATTACATACTCCCATGT 59.166 33.333 0.00 0.00 41.88 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 6.486657 GCATAGCATTTTTGGATGGAGTACTA 59.513 38.462 0.00 0.00 0.00 1.82
86 87 3.005791 TGAGCTGAGATGAACTTGTTCGA 59.994 43.478 8.68 0.00 0.00 3.71
92 93 5.221145 CGTACCTATGAGCTGAGATGAACTT 60.221 44.000 0.00 0.00 0.00 2.66
116 117 1.743252 GCACTGCAGCCAGGTACTC 60.743 63.158 15.27 0.00 43.53 2.59
122 123 2.643272 CTTGTGCACTGCAGCCAG 59.357 61.111 19.41 5.25 40.08 4.85
129 130 3.004002 TGAATTCTTCTGCTTGTGCACTG 59.996 43.478 19.41 11.95 45.31 3.66
138 139 4.660168 AGTGACCAATGAATTCTTCTGCT 58.340 39.130 7.05 0.00 0.00 4.24
195 197 1.815003 GACAAGGAGGCATCACAAAGG 59.185 52.381 0.00 0.00 0.00 3.11
201 203 0.465705 GGATCGACAAGGAGGCATCA 59.534 55.000 0.00 0.00 0.00 3.07
202 204 0.598680 CGGATCGACAAGGAGGCATC 60.599 60.000 0.00 0.00 0.00 3.91
203 205 1.443407 CGGATCGACAAGGAGGCAT 59.557 57.895 0.00 0.00 0.00 4.40
217 219 2.639327 GCAAAGCCTTGGTGCGGAT 61.639 57.895 0.00 0.00 36.02 4.18
231 233 5.711506 AGTGATCAATGATGTTACCTGCAAA 59.288 36.000 0.00 0.00 0.00 3.68
232 234 5.124297 CAGTGATCAATGATGTTACCTGCAA 59.876 40.000 18.07 0.00 0.00 4.08
234 236 4.637534 ACAGTGATCAATGATGTTACCTGC 59.362 41.667 28.44 0.00 0.00 4.85
270 274 2.093447 CCCGTCAGCTATTGAAAGAGGT 60.093 50.000 0.00 0.00 37.61 3.85
289 293 5.376625 TCTTCATTATGTAAGTGCCATCCC 58.623 41.667 0.00 0.00 0.00 3.85
311 315 9.860898 ATTAAATCTGGCTACTCAAACAAAATC 57.139 29.630 0.00 0.00 0.00 2.17
319 323 9.113838 GATCAGAAATTAAATCTGGCTACTCAA 57.886 33.333 17.01 1.75 43.58 3.02
320 324 8.267183 TGATCAGAAATTAAATCTGGCTACTCA 58.733 33.333 17.01 11.37 43.58 3.41
321 325 8.668510 TGATCAGAAATTAAATCTGGCTACTC 57.331 34.615 17.01 9.77 43.58 2.59
331 335 7.338800 AGGCGACAATGATCAGAAATTAAAT 57.661 32.000 0.09 0.00 0.00 1.40
424 428 9.898152 TGGAAATTTTACCAGAACAAGATTTTT 57.102 25.926 0.00 0.00 0.00 1.94
458 462 7.719193 TGTCTGAACATTCTTTGGAGTGAATAA 59.281 33.333 0.00 0.00 34.03 1.40
467 471 6.261826 AGTTTCTCTGTCTGAACATTCTTTGG 59.738 38.462 0.00 0.00 34.13 3.28
581 617 6.360329 AGACATCGTTTTTACGTGTCAATTC 58.640 36.000 22.43 7.74 41.65 2.17
586 622 4.371882 CGAAGACATCGTTTTTACGTGTC 58.628 43.478 17.42 17.42 46.52 3.67
599 635 1.152383 GGCCCGTTAGCGAAGACATC 61.152 60.000 0.00 0.00 41.33 3.06
601 637 2.263540 GGCCCGTTAGCGAAGACA 59.736 61.111 0.00 0.00 41.33 3.41
1284 1320 4.401519 TCTCCCAGAAGATACCGTTAACAG 59.598 45.833 6.39 0.00 0.00 3.16
1290 1326 5.894393 CCATATATCTCCCAGAAGATACCGT 59.106 44.000 0.00 0.00 40.21 4.83
1333 1369 7.865706 ATACAGAGTCAAATTAATCACCCAC 57.134 36.000 0.00 0.00 0.00 4.61
1393 1431 3.558411 CCGCAAGCTAGCTCGCAC 61.558 66.667 26.37 11.54 0.00 5.34
1398 1436 1.017387 GCATAAACCGCAAGCTAGCT 58.983 50.000 12.68 12.68 0.00 3.32
1402 1440 0.109781 CAACGCATAAACCGCAAGCT 60.110 50.000 0.00 0.00 0.00 3.74
1490 1528 2.745821 CGCTAAACCTAAACCCCAGAAC 59.254 50.000 0.00 0.00 0.00 3.01
1492 1530 2.235402 CTCGCTAAACCTAAACCCCAGA 59.765 50.000 0.00 0.00 0.00 3.86
1534 1637 1.971695 CAACTTTGAGGGGGTCGGC 60.972 63.158 0.00 0.00 0.00 5.54
1535 1638 1.758592 TCAACTTTGAGGGGGTCGG 59.241 57.895 0.00 0.00 32.50 4.79
1566 1676 0.172352 ATGCCGGCAAATTAACACGG 59.828 50.000 36.33 0.00 46.78 4.94
1583 1693 4.260661 GCAGCCGAGATTATGCATATCATG 60.261 45.833 7.36 3.40 38.54 3.07
1585 1695 3.264947 GCAGCCGAGATTATGCATATCA 58.735 45.455 7.36 0.00 38.54 2.15
1586 1696 2.283617 CGCAGCCGAGATTATGCATATC 59.716 50.000 7.36 7.53 38.60 1.63
1607 1717 6.763610 CCCCAGAACAGATACAAGATAAACTC 59.236 42.308 0.00 0.00 0.00 3.01
1680 1791 5.234466 AGCTGTAAAGATCTCCACTTTGT 57.766 39.130 0.00 0.00 37.96 2.83
1734 1845 5.521735 CGCAGCTCACAGAACTATCTTATTT 59.478 40.000 0.00 0.00 32.03 1.40
1735 1846 5.046529 CGCAGCTCACAGAACTATCTTATT 58.953 41.667 0.00 0.00 32.03 1.40
1736 1847 4.500545 CCGCAGCTCACAGAACTATCTTAT 60.501 45.833 0.00 0.00 32.03 1.73
1737 1848 3.181486 CCGCAGCTCACAGAACTATCTTA 60.181 47.826 0.00 0.00 32.03 2.10
1738 1849 2.417924 CCGCAGCTCACAGAACTATCTT 60.418 50.000 0.00 0.00 32.03 2.40
1761 1880 0.613777 AGGAAAGACTTAGCCCACCG 59.386 55.000 3.96 0.00 0.00 4.94
1828 1949 5.105392 GCATGACACCTAATCCAAATCCAAA 60.105 40.000 0.00 0.00 0.00 3.28
1830 1951 3.953612 GCATGACACCTAATCCAAATCCA 59.046 43.478 0.00 0.00 0.00 3.41
1832 1953 4.641989 ACAGCATGACACCTAATCCAAATC 59.358 41.667 0.00 0.00 39.69 2.17
1833 1954 4.400251 CACAGCATGACACCTAATCCAAAT 59.600 41.667 0.00 0.00 39.69 2.32
1852 1973 3.671433 GCAATACATTCACACAGCCACAG 60.671 47.826 0.00 0.00 0.00 3.66
1950 2075 5.278604 GCAATGAAACAACTTTTAGGTCGT 58.721 37.500 0.00 0.00 0.00 4.34
2001 2126 4.828072 AAGAACACTCTCAATAGGACCC 57.172 45.455 0.00 0.00 0.00 4.46
2050 2175 2.888212 TGGGCAAAATCTAGGCACTTT 58.112 42.857 0.00 0.00 41.75 2.66
2132 2258 6.374333 CACAAACTGCCAACTAACCTACATAT 59.626 38.462 0.00 0.00 0.00 1.78
2138 2264 3.012934 ACACAAACTGCCAACTAACCT 57.987 42.857 0.00 0.00 0.00 3.50
2220 2346 7.502120 TTCCATCTGACAAAGAGAAGAAAAG 57.498 36.000 0.00 0.00 38.67 2.27
2398 2524 4.558178 TGCTGGTGTGCAATCAATAAAAG 58.442 39.130 0.00 0.00 40.29 2.27
2407 2534 2.165641 CAGAATCATGCTGGTGTGCAAT 59.834 45.455 0.00 0.00 46.61 3.56
2452 2579 7.451566 ACCCATAATTTATTAGAAGGATGGCAC 59.548 37.037 0.00 0.00 0.00 5.01
2583 2891 2.031682 GCTGTGTCCTGCTAACAACAAG 60.032 50.000 0.00 0.00 33.16 3.16
2597 2905 3.387397 ACTAAAACGTGGTAGCTGTGTC 58.613 45.455 0.00 0.00 0.00 3.67
2661 2969 6.688637 TTGGATCATCTTTAACTGCAGATG 57.311 37.500 23.35 12.78 45.43 2.90
2664 2972 6.506500 AGTTTGGATCATCTTTAACTGCAG 57.493 37.500 13.48 13.48 0.00 4.41
2821 3130 4.157840 GGAACCCTAAGCCTACATTGTTTG 59.842 45.833 0.00 0.00 0.00 2.93
2896 3205 6.197168 TCAGCTCCCATGAATTCCTTTATTT 58.803 36.000 2.27 0.00 0.00 1.40
3068 3377 2.551270 AGTCTCCCCTCAATTGCTGTA 58.449 47.619 0.00 0.00 0.00 2.74
3439 3748 3.319755 CATACAAAGCCAAACAAGCCAG 58.680 45.455 0.00 0.00 0.00 4.85
3442 3751 3.658757 TCCATACAAAGCCAAACAAGC 57.341 42.857 0.00 0.00 0.00 4.01
3458 3769 4.723789 AGACAGGAAATGACAGGTATCCAT 59.276 41.667 0.00 0.00 32.47 3.41
3492 3803 0.609131 TTTTACTGCTGAGCCTGGGC 60.609 55.000 0.23 3.00 42.33 5.36
3573 3884 3.637911 AACGTCTTACATTATGGGGCA 57.362 42.857 0.00 0.00 0.00 5.36
3700 4011 0.251916 TTCACGCTTGATACAGGGGG 59.748 55.000 0.00 0.00 0.00 5.40
3741 4052 7.652909 CACATGTACATTCCAAATTTCACACTT 59.347 33.333 5.37 0.00 0.00 3.16
3795 4106 8.390921 AGGGGATTTGTTCTGAGAGTATTTTAA 58.609 33.333 0.00 0.00 0.00 1.52
3796 4107 7.928873 AGGGGATTTGTTCTGAGAGTATTTTA 58.071 34.615 0.00 0.00 0.00 1.52
3797 4108 6.794534 AGGGGATTTGTTCTGAGAGTATTTT 58.205 36.000 0.00 0.00 0.00 1.82
3798 4109 6.394345 AGGGGATTTGTTCTGAGAGTATTT 57.606 37.500 0.00 0.00 0.00 1.40
3799 4110 6.407074 CGTAGGGGATTTGTTCTGAGAGTATT 60.407 42.308 0.00 0.00 0.00 1.89
3800 4111 5.069251 CGTAGGGGATTTGTTCTGAGAGTAT 59.931 44.000 0.00 0.00 0.00 2.12
3801 4112 4.401519 CGTAGGGGATTTGTTCTGAGAGTA 59.598 45.833 0.00 0.00 0.00 2.59
3803 4114 3.786635 CGTAGGGGATTTGTTCTGAGAG 58.213 50.000 0.00 0.00 0.00 3.20
3804 4115 3.887621 CGTAGGGGATTTGTTCTGAGA 57.112 47.619 0.00 0.00 0.00 3.27
3820 4131 1.676006 GGCATGGATTTTCACCCGTAG 59.324 52.381 0.00 0.00 0.00 3.51
3821 4132 1.683629 GGGCATGGATTTTCACCCGTA 60.684 52.381 0.00 0.00 0.00 4.02
3822 4133 0.970427 GGGCATGGATTTTCACCCGT 60.970 55.000 0.00 0.00 0.00 5.28
3824 4135 0.325577 AGGGGCATGGATTTTCACCC 60.326 55.000 0.00 0.00 36.93 4.61
3825 4136 1.114627 GAGGGGCATGGATTTTCACC 58.885 55.000 0.00 0.00 0.00 4.02
3829 4140 4.821532 ATTCTAGAGGGGCATGGATTTT 57.178 40.909 0.00 0.00 0.00 1.82
3830 4141 5.553162 TCATATTCTAGAGGGGCATGGATTT 59.447 40.000 0.00 0.00 0.00 2.17
3856 4202 3.245284 TCGAAGAACAAGCGACAGAAAAG 59.755 43.478 0.00 0.00 0.00 2.27
3876 4222 5.512788 ACGGTTGTATAACAAAGTACGATCG 59.487 40.000 14.88 14.88 40.15 3.69
3972 4318 5.443185 TGCAGATAAAGCATAAAGGCATC 57.557 39.130 0.00 0.00 37.02 3.91
4002 4349 3.810386 GTGACTGAAAGGAAGACAGGTTC 59.190 47.826 0.00 0.00 39.30 3.62
4008 4355 2.838736 TGCAGTGACTGAAAGGAAGAC 58.161 47.619 18.18 0.00 39.30 3.01
4013 4360 2.808543 GGTAGTTGCAGTGACTGAAAGG 59.191 50.000 18.18 0.00 39.30 3.11
4025 4372 3.628032 CGAGACAGATAGAGGTAGTTGCA 59.372 47.826 0.00 0.00 0.00 4.08
4026 4373 3.878103 TCGAGACAGATAGAGGTAGTTGC 59.122 47.826 0.00 0.00 0.00 4.17
4033 4380 7.120579 ACAATATAAGCTCGAGACAGATAGAGG 59.879 40.741 18.75 0.00 0.00 3.69
4035 4382 7.987750 ACAATATAAGCTCGAGACAGATAGA 57.012 36.000 18.75 0.00 0.00 1.98
4038 4385 7.043961 TCAACAATATAAGCTCGAGACAGAT 57.956 36.000 18.75 5.73 0.00 2.90
4040 4387 6.754209 ACTTCAACAATATAAGCTCGAGACAG 59.246 38.462 18.75 0.00 0.00 3.51
4045 4394 8.942338 ACATTACTTCAACAATATAAGCTCGA 57.058 30.769 0.00 0.00 0.00 4.04
4130 4480 3.674477 AGGATCTCCCTTCCAGCTTAAT 58.326 45.455 0.00 0.00 44.85 1.40
4131 4481 3.136641 AGGATCTCCCTTCCAGCTTAA 57.863 47.619 0.00 0.00 44.85 1.85
4165 4515 4.033358 GTCTGATGAAACTGCGGATGTTAG 59.967 45.833 0.00 0.00 0.00 2.34
4190 4540 5.914898 ACACCAGCCATTTTAACCTTATC 57.085 39.130 0.00 0.00 0.00 1.75
4400 4762 0.472044 TCAGTACTGCCTTGGTGCAA 59.528 50.000 18.45 0.00 41.51 4.08
4588 4952 5.105063 CGTCTTCTGTCATCAGCATTTCTA 58.895 41.667 0.00 0.00 41.10 2.10
4696 5060 1.280421 GCACCTCTTGGAGATGGACTT 59.720 52.381 0.00 0.00 37.04 3.01
4758 5122 7.176340 ACGTGTCTTATAGTCACTAAGAAGGTT 59.824 37.037 9.08 0.00 37.06 3.50
4759 5123 6.658391 ACGTGTCTTATAGTCACTAAGAAGGT 59.342 38.462 9.08 2.87 37.06 3.50
4774 5138 7.280356 AGGGAATTAATTGCTACGTGTCTTAT 58.720 34.615 17.81 0.00 0.00 1.73
4849 5216 5.349270 TCAAAACGATAGGAACACATAACCG 59.651 40.000 0.00 0.00 43.77 4.44
4932 5304 7.838079 TTGCAGCATACCCATAAATTCTATT 57.162 32.000 0.00 0.00 0.00 1.73
5035 5407 6.573434 TCTGTACTGCAAAGACGATGATATT 58.427 36.000 0.00 0.00 0.00 1.28
5044 5416 7.891183 TTCTTCTAATCTGTACTGCAAAGAC 57.109 36.000 0.00 0.00 0.00 3.01
5323 6447 2.277084 CGGTCAAAATAAGGACTCCGG 58.723 52.381 0.00 0.00 34.49 5.14
5479 6603 2.016393 CTGCGGGATAAGGCTCGTCA 62.016 60.000 0.00 0.00 33.40 4.35
5639 6763 2.950309 ACTCATGGCATTGATCAGAAGC 59.050 45.455 0.00 1.44 0.00 3.86
5702 6826 3.133542 TGAGAAGCGGACTCATCATGAAT 59.866 43.478 0.00 0.00 39.10 2.57
5911 7035 0.179702 GCTCATCAGATGCACCTGGA 59.820 55.000 8.61 0.00 34.99 3.86
5974 7098 4.620567 GCATTAGTTTCTTCGCCCCAATTT 60.621 41.667 0.00 0.00 0.00 1.82
6148 7272 1.698506 TTCGCCCTTGTGAACCAAAT 58.301 45.000 0.00 0.00 36.11 2.32
6206 7330 5.245531 TGCACTTGTTTGGATAGGACTTAG 58.754 41.667 0.00 0.00 0.00 2.18
6271 7395 1.339438 CCAGTGGTAGCAGATGCACTT 60.339 52.381 7.68 0.00 45.16 3.16
6402 7526 1.735386 CTGGCTTGTGACTGGATGAG 58.265 55.000 0.00 0.00 0.00 2.90
6478 7602 2.905075 TGCCTGTTCGGATGTAATGAG 58.095 47.619 0.00 0.00 33.16 2.90
6593 7717 0.179936 GGAGCTGCTACTGGCTGATT 59.820 55.000 4.16 0.00 41.52 2.57
6594 7718 0.690411 AGGAGCTGCTACTGGCTGAT 60.690 55.000 14.94 0.00 41.52 2.90
6595 7719 0.033109 TAGGAGCTGCTACTGGCTGA 60.033 55.000 24.51 0.27 41.52 4.26
6596 7720 0.388659 CTAGGAGCTGCTACTGGCTG 59.611 60.000 24.51 7.97 42.39 4.85
6597 7721 1.398958 GCTAGGAGCTGCTACTGGCT 61.399 60.000 34.73 9.60 44.11 4.75
6598 7722 1.068921 GCTAGGAGCTGCTACTGGC 59.931 63.158 30.50 30.50 41.44 4.85
6599 7723 1.047002 ATGCTAGGAGCTGCTACTGG 58.953 55.000 24.51 22.14 42.97 4.00
6600 7724 1.873069 GCATGCTAGGAGCTGCTACTG 60.873 57.143 24.51 14.61 42.97 2.74
6601 7725 0.392336 GCATGCTAGGAGCTGCTACT 59.608 55.000 19.93 19.93 42.97 2.57
6602 7726 0.105593 TGCATGCTAGGAGCTGCTAC 59.894 55.000 20.33 2.91 42.97 3.58
6603 7727 0.391966 CTGCATGCTAGGAGCTGCTA 59.608 55.000 20.33 14.81 42.97 3.49
6604 7728 1.146485 CTGCATGCTAGGAGCTGCT 59.854 57.895 20.33 13.92 42.97 4.24
6605 7729 0.463295 TTCTGCATGCTAGGAGCTGC 60.463 55.000 20.33 0.00 42.97 5.25
6606 7730 2.144730 GATTCTGCATGCTAGGAGCTG 58.855 52.381 20.33 6.70 42.97 4.24
6607 7731 1.767088 TGATTCTGCATGCTAGGAGCT 59.233 47.619 20.33 6.10 42.97 4.09
6608 7732 2.144730 CTGATTCTGCATGCTAGGAGC 58.855 52.381 20.33 12.41 42.82 4.70
6609 7733 2.144730 GCTGATTCTGCATGCTAGGAG 58.855 52.381 20.33 7.89 0.00 3.69
6610 7734 1.202734 GGCTGATTCTGCATGCTAGGA 60.203 52.381 20.33 9.83 0.00 2.94
6611 7735 1.236628 GGCTGATTCTGCATGCTAGG 58.763 55.000 20.33 9.25 0.00 3.02
6612 7736 1.874231 CTGGCTGATTCTGCATGCTAG 59.126 52.381 20.33 14.33 0.00 3.42
6613 7737 1.211212 ACTGGCTGATTCTGCATGCTA 59.789 47.619 20.33 4.02 0.00 3.49
6614 7738 0.034380 ACTGGCTGATTCTGCATGCT 60.034 50.000 20.33 0.00 0.00 3.79
6615 7739 1.602851 CTACTGGCTGATTCTGCATGC 59.397 52.381 11.82 11.82 0.00 4.06
6616 7740 1.602851 GCTACTGGCTGATTCTGCATG 59.397 52.381 16.12 10.49 38.06 4.06
6617 7741 1.211212 TGCTACTGGCTGATTCTGCAT 59.789 47.619 16.12 5.02 42.39 3.96
6618 7742 0.614812 TGCTACTGGCTGATTCTGCA 59.385 50.000 16.12 0.00 42.39 4.41
6619 7743 1.297664 CTGCTACTGGCTGATTCTGC 58.702 55.000 6.97 6.97 41.52 4.26
6620 7744 1.134461 AGCTGCTACTGGCTGATTCTG 60.134 52.381 0.00 0.00 41.52 3.02
6621 7745 1.138661 GAGCTGCTACTGGCTGATTCT 59.861 52.381 0.15 0.00 41.52 2.40
6622 7746 1.580815 GAGCTGCTACTGGCTGATTC 58.419 55.000 0.15 0.00 41.52 2.52
6637 7761 1.971357 CCGTGTCCCATATAAGGAGCT 59.029 52.381 0.00 0.00 32.84 4.09
6721 7845 1.134128 TCTTGCAGAACTTGACCAGCA 60.134 47.619 0.00 0.00 0.00 4.41
6735 7859 3.430862 GCGTTGGGCGATCTTGCA 61.431 61.111 0.00 0.00 44.77 4.08
6781 7905 4.202514 TGGTTAGGATTGGACATGTCAACA 60.203 41.667 26.47 13.85 0.00 3.33
6850 7974 2.159338 AGCTTGCATATTTGGAGCAACG 60.159 45.455 7.03 0.00 42.71 4.10
6958 8082 3.044235 TGCATATATGGAGGAGCAACG 57.956 47.619 14.51 0.00 0.00 4.10
7131 8255 0.955919 GGGCAACTGTAGTCCAGCAC 60.956 60.000 0.00 0.00 45.68 4.40
7435 8592 6.587608 CCTTTTTATTCTTGTCACCATCTTGC 59.412 38.462 0.00 0.00 0.00 4.01
7444 8601 5.860941 TGTTGCCCTTTTTATTCTTGTCA 57.139 34.783 0.00 0.00 0.00 3.58
7621 8778 2.623416 CTCTTTTGTTGGAGGGGTGTTC 59.377 50.000 0.00 0.00 0.00 3.18
7710 8867 2.202946 GCAGGAGTAAGAGCGGCC 60.203 66.667 0.00 0.00 0.00 6.13
7711 8868 1.520342 CAGCAGGAGTAAGAGCGGC 60.520 63.158 0.00 0.00 0.00 6.53
7717 8874 1.461127 GTCGTTTGCAGCAGGAGTAAG 59.539 52.381 0.00 0.00 0.00 2.34
7727 8884 1.447317 AAGTGCCAGGTCGTTTGCAG 61.447 55.000 0.00 0.00 33.80 4.41
7778 8935 2.246739 CCGACATACGCCTGCCATG 61.247 63.158 0.00 0.00 41.07 3.66
7779 8936 2.108976 CCGACATACGCCTGCCAT 59.891 61.111 0.00 0.00 41.07 4.40
7952 9113 3.791887 GGAGAAGACGATGATACAACACG 59.208 47.826 0.00 0.00 0.00 4.49
7970 9131 4.590918 TGGTGTTGTTGTACAAAAGGAGA 58.409 39.130 10.51 0.00 40.15 3.71
8177 9346 5.242393 TCAGGCAATTTCCTTCAGAGAAAAG 59.758 40.000 0.00 0.00 36.83 2.27
8205 9374 0.735632 CGCTGCTCTCTCCTCAACAC 60.736 60.000 0.00 0.00 0.00 3.32
8209 9378 3.456365 GGCGCTGCTCTCTCCTCA 61.456 66.667 7.64 0.00 0.00 3.86
8227 9396 3.729862 AGGAGTATAACAGTAAGCGCC 57.270 47.619 2.29 0.00 0.00 6.53
8234 9403 9.275572 TCCTTTACCAAATAGGAGTATAACAGT 57.724 33.333 0.00 0.00 41.22 3.55
8237 9406 9.895138 TTGTCCTTTACCAAATAGGAGTATAAC 57.105 33.333 0.00 0.00 38.69 1.89
8242 9411 6.187682 CCATTGTCCTTTACCAAATAGGAGT 58.812 40.000 0.00 0.00 38.69 3.85
8243 9412 5.594317 CCCATTGTCCTTTACCAAATAGGAG 59.406 44.000 0.00 0.00 38.69 3.69
8245 9414 5.515106 TCCCATTGTCCTTTACCAAATAGG 58.485 41.667 0.00 0.00 45.67 2.57
8246 9415 6.423182 TCTCCCATTGTCCTTTACCAAATAG 58.577 40.000 0.00 0.00 0.00 1.73
8247 9416 6.395780 TCTCCCATTGTCCTTTACCAAATA 57.604 37.500 0.00 0.00 0.00 1.40
8248 9417 5.269554 TCTCCCATTGTCCTTTACCAAAT 57.730 39.130 0.00 0.00 0.00 2.32
8249 9418 4.733077 TCTCCCATTGTCCTTTACCAAA 57.267 40.909 0.00 0.00 0.00 3.28
8250 9419 4.733077 TTCTCCCATTGTCCTTTACCAA 57.267 40.909 0.00 0.00 0.00 3.67
8251 9420 4.733077 TTTCTCCCATTGTCCTTTACCA 57.267 40.909 0.00 0.00 0.00 3.25
8252 9421 7.712204 TTATTTTCTCCCATTGTCCTTTACC 57.288 36.000 0.00 0.00 0.00 2.85
8255 9424 9.547279 AGTATTTATTTTCTCCCATTGTCCTTT 57.453 29.630 0.00 0.00 0.00 3.11
8256 9425 9.190317 GAGTATTTATTTTCTCCCATTGTCCTT 57.810 33.333 0.00 0.00 0.00 3.36
8257 9426 7.780271 GGAGTATTTATTTTCTCCCATTGTCCT 59.220 37.037 0.00 0.00 40.14 3.85
8258 9427 7.941919 GGAGTATTTATTTTCTCCCATTGTCC 58.058 38.462 0.00 0.00 40.14 4.02
8268 9437 6.447084 TGGGACAGAGGGAGTATTTATTTTCT 59.553 38.462 0.00 0.00 0.00 2.52
8280 9449 4.263506 ACAGTTATTTTGGGACAGAGGGAG 60.264 45.833 0.00 0.00 42.39 4.30
8281 9450 3.655777 ACAGTTATTTTGGGACAGAGGGA 59.344 43.478 0.00 0.00 42.39 4.20
8282 9451 4.010349 GACAGTTATTTTGGGACAGAGGG 58.990 47.826 0.00 0.00 42.39 4.30
8283 9452 4.911390 AGACAGTTATTTTGGGACAGAGG 58.089 43.478 0.00 0.00 42.39 3.69
8284 9453 5.551233 TGAGACAGTTATTTTGGGACAGAG 58.449 41.667 0.00 0.00 42.39 3.35
8285 9454 5.560722 TGAGACAGTTATTTTGGGACAGA 57.439 39.130 0.00 0.00 42.39 3.41
8286 9455 5.335191 GCTTGAGACAGTTATTTTGGGACAG 60.335 44.000 0.00 0.00 42.39 3.51
8287 9456 4.518970 GCTTGAGACAGTTATTTTGGGACA 59.481 41.667 0.00 0.00 0.00 4.02
8288 9457 4.762251 AGCTTGAGACAGTTATTTTGGGAC 59.238 41.667 0.00 0.00 0.00 4.46
8289 9458 4.985538 AGCTTGAGACAGTTATTTTGGGA 58.014 39.130 0.00 0.00 0.00 4.37
8290 9459 5.712152 AAGCTTGAGACAGTTATTTTGGG 57.288 39.130 0.00 0.00 0.00 4.12
8291 9460 7.440523 ACTAAGCTTGAGACAGTTATTTTGG 57.559 36.000 9.86 0.00 0.00 3.28
8292 9461 8.988934 TGTACTAAGCTTGAGACAGTTATTTTG 58.011 33.333 9.86 0.00 0.00 2.44
8293 9462 9.555727 TTGTACTAAGCTTGAGACAGTTATTTT 57.444 29.630 9.86 0.00 0.00 1.82
8294 9463 9.555727 TTTGTACTAAGCTTGAGACAGTTATTT 57.444 29.630 9.86 0.00 0.00 1.40
8295 9464 9.726438 ATTTGTACTAAGCTTGAGACAGTTATT 57.274 29.630 9.86 0.00 0.00 1.40
8296 9465 9.726438 AATTTGTACTAAGCTTGAGACAGTTAT 57.274 29.630 9.86 3.00 0.00 1.89
8297 9466 9.555727 AAATTTGTACTAAGCTTGAGACAGTTA 57.444 29.630 9.86 0.93 0.00 2.24
8298 9467 8.345565 CAAATTTGTACTAAGCTTGAGACAGTT 58.654 33.333 9.86 6.34 0.00 3.16
8299 9468 7.499232 ACAAATTTGTACTAAGCTTGAGACAGT 59.501 33.333 22.10 6.64 40.16 3.55
8300 9469 7.865707 ACAAATTTGTACTAAGCTTGAGACAG 58.134 34.615 22.10 0.00 40.16 3.51
8301 9470 7.801716 ACAAATTTGTACTAAGCTTGAGACA 57.198 32.000 22.10 7.12 40.16 3.41
8340 9509 8.076178 CCGTCTCAAAATAAATGTCTCAACTTT 58.924 33.333 0.00 0.00 0.00 2.66
8341 9510 7.444183 TCCGTCTCAAAATAAATGTCTCAACTT 59.556 33.333 0.00 0.00 0.00 2.66
8342 9511 6.934645 TCCGTCTCAAAATAAATGTCTCAACT 59.065 34.615 0.00 0.00 0.00 3.16
8343 9512 7.129109 TCCGTCTCAAAATAAATGTCTCAAC 57.871 36.000 0.00 0.00 0.00 3.18
8344 9513 6.371548 CCTCCGTCTCAAAATAAATGTCTCAA 59.628 38.462 0.00 0.00 0.00 3.02
8345 9514 5.874810 CCTCCGTCTCAAAATAAATGTCTCA 59.125 40.000 0.00 0.00 0.00 3.27
8346 9515 5.220681 GCCTCCGTCTCAAAATAAATGTCTC 60.221 44.000 0.00 0.00 0.00 3.36
8347 9516 4.636206 GCCTCCGTCTCAAAATAAATGTCT 59.364 41.667 0.00 0.00 0.00 3.41
8348 9517 4.394920 TGCCTCCGTCTCAAAATAAATGTC 59.605 41.667 0.00 0.00 0.00 3.06
8349 9518 4.331968 TGCCTCCGTCTCAAAATAAATGT 58.668 39.130 0.00 0.00 0.00 2.71
8350 9519 4.396166 ACTGCCTCCGTCTCAAAATAAATG 59.604 41.667 0.00 0.00 0.00 2.32
8351 9520 4.589908 ACTGCCTCCGTCTCAAAATAAAT 58.410 39.130 0.00 0.00 0.00 1.40
8352 9521 4.015872 ACTGCCTCCGTCTCAAAATAAA 57.984 40.909 0.00 0.00 0.00 1.40
8353 9522 3.695830 ACTGCCTCCGTCTCAAAATAA 57.304 42.857 0.00 0.00 0.00 1.40
8354 9523 4.222145 ACTTACTGCCTCCGTCTCAAAATA 59.778 41.667 0.00 0.00 0.00 1.40
8355 9524 3.008049 ACTTACTGCCTCCGTCTCAAAAT 59.992 43.478 0.00 0.00 0.00 1.82
8356 9525 2.367567 ACTTACTGCCTCCGTCTCAAAA 59.632 45.455 0.00 0.00 0.00 2.44
8357 9526 1.968493 ACTTACTGCCTCCGTCTCAAA 59.032 47.619 0.00 0.00 0.00 2.69
8358 9527 1.629043 ACTTACTGCCTCCGTCTCAA 58.371 50.000 0.00 0.00 0.00 3.02
8359 9528 1.272490 CAACTTACTGCCTCCGTCTCA 59.728 52.381 0.00 0.00 0.00 3.27
8360 9529 1.272769 ACAACTTACTGCCTCCGTCTC 59.727 52.381 0.00 0.00 0.00 3.36
8361 9530 1.000955 CACAACTTACTGCCTCCGTCT 59.999 52.381 0.00 0.00 0.00 4.18
8362 9531 1.429463 CACAACTTACTGCCTCCGTC 58.571 55.000 0.00 0.00 0.00 4.79
8363 9532 0.034896 CCACAACTTACTGCCTCCGT 59.965 55.000 0.00 0.00 0.00 4.69
8364 9533 0.673644 CCCACAACTTACTGCCTCCG 60.674 60.000 0.00 0.00 0.00 4.63
8365 9534 0.322546 CCCCACAACTTACTGCCTCC 60.323 60.000 0.00 0.00 0.00 4.30
8366 9535 0.690762 TCCCCACAACTTACTGCCTC 59.309 55.000 0.00 0.00 0.00 4.70
8367 9536 0.400594 GTCCCCACAACTTACTGCCT 59.599 55.000 0.00 0.00 0.00 4.75
8368 9537 0.109723 TGTCCCCACAACTTACTGCC 59.890 55.000 0.00 0.00 0.00 4.85
8372 9541 2.882761 GGAGTTTGTCCCCACAACTTAC 59.117 50.000 0.00 0.00 42.46 2.34
8375 9544 3.821306 GGAGTTTGTCCCCACAACT 57.179 52.632 0.00 0.00 42.46 3.16
8384 9553 3.067106 TGCTTCGAATCAGGAGTTTGTC 58.933 45.455 0.00 0.00 0.00 3.18
8532 9701 1.122019 AGACGGACAGAAAGGTGCCT 61.122 55.000 0.00 0.00 0.00 4.75
8538 9707 3.070018 AGCATTTGAGACGGACAGAAAG 58.930 45.455 0.00 0.00 0.00 2.62
8539 9708 2.807967 CAGCATTTGAGACGGACAGAAA 59.192 45.455 0.00 0.00 0.00 2.52
8540 9709 2.037121 TCAGCATTTGAGACGGACAGAA 59.963 45.455 0.00 0.00 0.00 3.02
8542 9711 2.084610 TCAGCATTTGAGACGGACAG 57.915 50.000 0.00 0.00 0.00 3.51
8548 9719 4.096081 CCCTTTGAGATCAGCATTTGAGAC 59.904 45.833 0.00 0.00 39.68 3.36
8555 9726 1.134280 CGGTCCCTTTGAGATCAGCAT 60.134 52.381 0.00 0.00 0.00 3.79
8582 9753 7.411480 GCAAAATAAAATTTCAGGCGACTTACC 60.411 37.037 0.00 0.00 40.21 2.85
8586 9757 5.537188 TGCAAAATAAAATTTCAGGCGACT 58.463 33.333 0.00 0.00 46.44 4.18
8589 9760 6.226988 ACTTGCAAAATAAAATTTCAGGCG 57.773 33.333 0.00 0.00 0.00 5.52
8638 9809 5.750352 AGAAACAAGAATGGCAATTGGAT 57.250 34.783 7.72 3.75 0.00 3.41
8645 9821 4.473444 AGGAAGAAGAAACAAGAATGGCA 58.527 39.130 0.00 0.00 0.00 4.92
8668 9844 2.831526 GCAATGGGGGAAGAAAGCTTTA 59.168 45.455 12.68 0.00 33.61 1.85
8669 9845 1.625315 GCAATGGGGGAAGAAAGCTTT 59.375 47.619 12.53 12.53 33.61 3.51
8671 9847 0.411058 AGCAATGGGGGAAGAAAGCT 59.589 50.000 0.00 0.00 0.00 3.74
8672 9848 1.066645 CAAGCAATGGGGGAAGAAAGC 60.067 52.381 0.00 0.00 0.00 3.51
8673 9849 1.066645 GCAAGCAATGGGGGAAGAAAG 60.067 52.381 0.00 0.00 0.00 2.62
8675 9851 0.904394 GGCAAGCAATGGGGGAAGAA 60.904 55.000 0.00 0.00 0.00 2.52
8676 9852 1.305213 GGCAAGCAATGGGGGAAGA 60.305 57.895 0.00 0.00 0.00 2.87
8677 9853 1.305549 AGGCAAGCAATGGGGGAAG 60.306 57.895 0.00 0.00 0.00 3.46
8679 9855 2.360191 GAGGCAAGCAATGGGGGA 59.640 61.111 0.00 0.00 0.00 4.81
8681 9857 3.142838 CGGAGGCAAGCAATGGGG 61.143 66.667 0.00 0.00 0.00 4.96
8694 9870 0.105039 GGACAATAGGTGAGCCGGAG 59.895 60.000 5.05 0.00 40.50 4.63
8695 9871 0.325296 AGGACAATAGGTGAGCCGGA 60.325 55.000 5.05 0.00 40.50 5.14
8696 9872 0.541863 AAGGACAATAGGTGAGCCGG 59.458 55.000 0.00 0.00 40.50 6.13
8697 9873 1.656652 CAAGGACAATAGGTGAGCCG 58.343 55.000 0.00 0.00 40.50 5.52
8698 9874 1.383523 GCAAGGACAATAGGTGAGCC 58.616 55.000 0.00 0.00 0.00 4.70
8699 9875 1.065126 AGGCAAGGACAATAGGTGAGC 60.065 52.381 0.00 0.00 0.00 4.26
8700 9876 2.503356 AGAGGCAAGGACAATAGGTGAG 59.497 50.000 0.00 0.00 0.00 3.51
8701 9877 2.237143 CAGAGGCAAGGACAATAGGTGA 59.763 50.000 0.00 0.00 0.00 4.02
8702 9878 2.636830 CAGAGGCAAGGACAATAGGTG 58.363 52.381 0.00 0.00 0.00 4.00
8703 9879 1.561542 CCAGAGGCAAGGACAATAGGT 59.438 52.381 0.00 0.00 0.00 3.08
8704 9880 2.338577 CCAGAGGCAAGGACAATAGG 57.661 55.000 0.00 0.00 0.00 2.57
8722 9898 2.098831 GTTAGACAACGGCCTCGCC 61.099 63.158 0.00 0.00 46.75 5.54
8723 9899 1.077089 GAGTTAGACAACGGCCTCGC 61.077 60.000 0.00 0.00 39.78 5.03
8724 9900 0.797249 CGAGTTAGACAACGGCCTCG 60.797 60.000 0.00 0.00 39.78 4.63
8725 9901 0.524862 TCGAGTTAGACAACGGCCTC 59.475 55.000 0.00 0.00 39.78 4.70
8726 9902 0.526662 CTCGAGTTAGACAACGGCCT 59.473 55.000 3.62 0.00 39.78 5.19
8727 9903 1.077089 GCTCGAGTTAGACAACGGCC 61.077 60.000 15.13 0.00 39.78 6.13
8728 9904 0.388134 TGCTCGAGTTAGACAACGGC 60.388 55.000 15.13 0.00 39.78 5.68
8729 9905 1.618861 CTGCTCGAGTTAGACAACGG 58.381 55.000 15.13 0.00 39.78 4.44
8730 9906 1.199327 TCCTGCTCGAGTTAGACAACG 59.801 52.381 15.13 0.79 39.78 4.10
8731 9907 3.299340 TTCCTGCTCGAGTTAGACAAC 57.701 47.619 15.13 0.00 34.67 3.32
8732 9908 3.509967 TGATTCCTGCTCGAGTTAGACAA 59.490 43.478 15.13 9.28 0.00 3.18
8733 9909 3.089284 TGATTCCTGCTCGAGTTAGACA 58.911 45.455 15.13 1.71 0.00 3.41
8734 9910 3.784701 TGATTCCTGCTCGAGTTAGAC 57.215 47.619 15.13 0.00 0.00 2.59
8735 9911 5.594725 AGTATTGATTCCTGCTCGAGTTAGA 59.405 40.000 15.13 5.32 0.00 2.10
8736 9912 5.837437 AGTATTGATTCCTGCTCGAGTTAG 58.163 41.667 15.13 12.51 0.00 2.34
8737 9913 5.854010 AGTATTGATTCCTGCTCGAGTTA 57.146 39.130 15.13 2.73 0.00 2.24
8738 9914 4.744795 AGTATTGATTCCTGCTCGAGTT 57.255 40.909 15.13 0.00 0.00 3.01
8739 9915 5.854010 TTAGTATTGATTCCTGCTCGAGT 57.146 39.130 15.13 0.00 0.00 4.18
8740 9916 7.032580 CCTATTAGTATTGATTCCTGCTCGAG 58.967 42.308 8.45 8.45 0.00 4.04
8741 9917 6.572509 GCCTATTAGTATTGATTCCTGCTCGA 60.573 42.308 0.00 0.00 0.00 4.04
8742 9918 5.578727 GCCTATTAGTATTGATTCCTGCTCG 59.421 44.000 0.00 0.00 0.00 5.03
8743 9919 6.370166 GTGCCTATTAGTATTGATTCCTGCTC 59.630 42.308 0.00 0.00 0.00 4.26
8744 9920 6.234177 GTGCCTATTAGTATTGATTCCTGCT 58.766 40.000 0.00 0.00 0.00 4.24
8745 9921 5.412904 GGTGCCTATTAGTATTGATTCCTGC 59.587 44.000 0.00 0.00 0.00 4.85
8746 9922 6.773638 AGGTGCCTATTAGTATTGATTCCTG 58.226 40.000 0.00 0.00 0.00 3.86
8747 9923 8.686739 ATAGGTGCCTATTAGTATTGATTCCT 57.313 34.615 4.98 0.00 35.92 3.36
8748 9924 7.988028 GGATAGGTGCCTATTAGTATTGATTCC 59.012 40.741 11.64 2.17 39.15 3.01
8749 9925 8.763601 AGGATAGGTGCCTATTAGTATTGATTC 58.236 37.037 11.64 0.00 39.15 2.52
8750 9926 8.686739 AGGATAGGTGCCTATTAGTATTGATT 57.313 34.615 11.64 0.00 39.15 2.57
8751 9927 7.901322 TGAGGATAGGTGCCTATTAGTATTGAT 59.099 37.037 11.64 0.00 39.15 2.57
8752 9928 7.246027 TGAGGATAGGTGCCTATTAGTATTGA 58.754 38.462 11.64 0.00 39.15 2.57
8753 9929 7.482169 TGAGGATAGGTGCCTATTAGTATTG 57.518 40.000 11.64 0.00 39.15 1.90
8754 9930 8.543774 CAATGAGGATAGGTGCCTATTAGTATT 58.456 37.037 11.64 8.35 39.15 1.89
8755 9931 7.126421 CCAATGAGGATAGGTGCCTATTAGTAT 59.874 40.741 11.64 3.63 39.15 2.12
8756 9932 6.440647 CCAATGAGGATAGGTGCCTATTAGTA 59.559 42.308 11.64 1.70 39.15 1.82
8757 9933 5.249393 CCAATGAGGATAGGTGCCTATTAGT 59.751 44.000 11.64 0.99 39.15 2.24
8758 9934 5.249393 ACCAATGAGGATAGGTGCCTATTAG 59.751 44.000 11.64 0.00 39.15 1.73
8759 9935 5.162637 ACCAATGAGGATAGGTGCCTATTA 58.837 41.667 11.64 1.40 39.15 0.98
8760 9936 3.983410 ACCAATGAGGATAGGTGCCTATT 59.017 43.478 11.64 0.00 39.15 1.73
8761 9937 3.584848 GACCAATGAGGATAGGTGCCTAT 59.415 47.826 10.30 10.30 41.48 2.57
8762 9938 2.972713 GACCAATGAGGATAGGTGCCTA 59.027 50.000 0.00 0.00 41.22 3.93
8763 9939 1.771255 GACCAATGAGGATAGGTGCCT 59.229 52.381 0.00 0.00 41.22 4.75
8764 9940 1.490490 TGACCAATGAGGATAGGTGCC 59.510 52.381 0.00 0.00 41.22 5.01
8765 9941 2.945668 GTTGACCAATGAGGATAGGTGC 59.054 50.000 0.00 0.00 41.22 5.01
8766 9942 3.545703 GGTTGACCAATGAGGATAGGTG 58.454 50.000 0.00 0.00 41.22 4.00
8767 9943 2.509964 GGGTTGACCAATGAGGATAGGT 59.490 50.000 2.12 0.00 41.22 3.08
8768 9944 2.780010 AGGGTTGACCAATGAGGATAGG 59.220 50.000 2.12 0.00 43.89 2.57
8769 9945 3.455910 TGAGGGTTGACCAATGAGGATAG 59.544 47.826 2.12 0.00 43.89 2.08
8770 9946 3.455910 CTGAGGGTTGACCAATGAGGATA 59.544 47.826 2.12 0.00 43.89 2.59
8771 9947 2.240667 CTGAGGGTTGACCAATGAGGAT 59.759 50.000 2.12 0.00 43.89 3.24
8772 9948 1.630369 CTGAGGGTTGACCAATGAGGA 59.370 52.381 2.12 0.00 43.89 3.71
8773 9949 1.630369 TCTGAGGGTTGACCAATGAGG 59.370 52.381 2.12 0.00 43.89 3.86
8774 9950 2.304180 AGTCTGAGGGTTGACCAATGAG 59.696 50.000 2.12 0.00 43.89 2.90
8775 9951 2.303022 GAGTCTGAGGGTTGACCAATGA 59.697 50.000 2.12 0.00 43.89 2.57
8776 9952 2.704572 GAGTCTGAGGGTTGACCAATG 58.295 52.381 2.12 0.00 43.89 2.82
8777 9953 1.276421 CGAGTCTGAGGGTTGACCAAT 59.724 52.381 2.12 0.00 43.89 3.16
8778 9954 0.679505 CGAGTCTGAGGGTTGACCAA 59.320 55.000 2.12 0.00 43.89 3.67
8779 9955 1.816863 GCGAGTCTGAGGGTTGACCA 61.817 60.000 2.12 0.00 43.89 4.02
8780 9956 1.079750 GCGAGTCTGAGGGTTGACC 60.080 63.158 0.00 0.00 40.67 4.02
8781 9957 1.079750 GGCGAGTCTGAGGGTTGAC 60.080 63.158 0.00 0.00 0.00 3.18
8782 9958 1.228894 AGGCGAGTCTGAGGGTTGA 60.229 57.895 0.00 0.00 0.00 3.18
8783 9959 1.216710 GAGGCGAGTCTGAGGGTTG 59.783 63.158 0.00 0.00 0.00 3.77
8784 9960 1.985116 GGAGGCGAGTCTGAGGGTT 60.985 63.158 0.00 0.00 0.00 4.11
8785 9961 2.363147 GGAGGCGAGTCTGAGGGT 60.363 66.667 0.00 0.00 0.00 4.34
8786 9962 3.522731 CGGAGGCGAGTCTGAGGG 61.523 72.222 0.00 0.00 0.00 4.30
8787 9963 4.200283 GCGGAGGCGAGTCTGAGG 62.200 72.222 0.00 0.00 0.00 3.86
8788 9964 2.606155 GAAGCGGAGGCGAGTCTGAG 62.606 65.000 0.00 0.00 46.35 3.35
8789 9965 2.676822 AAGCGGAGGCGAGTCTGA 60.677 61.111 0.00 0.00 46.35 3.27
8790 9966 2.202676 GAAGCGGAGGCGAGTCTG 60.203 66.667 0.00 0.00 46.35 3.51
8791 9967 2.676822 TGAAGCGGAGGCGAGTCT 60.677 61.111 0.00 0.00 46.35 3.24
8792 9968 2.507324 GTGAAGCGGAGGCGAGTC 60.507 66.667 0.00 0.00 46.35 3.36
8793 9969 4.070552 GGTGAAGCGGAGGCGAGT 62.071 66.667 0.00 0.00 46.35 4.18
8794 9970 1.945354 TTAGGTGAAGCGGAGGCGAG 61.945 60.000 0.00 0.00 46.35 5.03
8795 9971 1.327690 ATTAGGTGAAGCGGAGGCGA 61.328 55.000 0.00 0.00 46.35 5.54
8796 9972 1.144057 ATTAGGTGAAGCGGAGGCG 59.856 57.895 0.00 0.00 46.35 5.52
8797 9973 0.107654 ACATTAGGTGAAGCGGAGGC 60.108 55.000 0.00 0.00 40.37 4.70
8798 9974 1.473434 GGACATTAGGTGAAGCGGAGG 60.473 57.143 0.00 0.00 0.00 4.30
8799 9975 1.482593 AGGACATTAGGTGAAGCGGAG 59.517 52.381 0.00 0.00 0.00 4.63
8800 9976 1.480954 GAGGACATTAGGTGAAGCGGA 59.519 52.381 0.00 0.00 0.00 5.54
8801 9977 1.802880 CGAGGACATTAGGTGAAGCGG 60.803 57.143 0.00 0.00 0.00 5.52
8802 9978 1.560923 CGAGGACATTAGGTGAAGCG 58.439 55.000 0.00 0.00 0.00 4.68
8803 9979 1.291132 GCGAGGACATTAGGTGAAGC 58.709 55.000 0.00 0.00 0.00 3.86
8804 9980 1.482593 AGGCGAGGACATTAGGTGAAG 59.517 52.381 0.00 0.00 0.00 3.02
8805 9981 1.480954 GAGGCGAGGACATTAGGTGAA 59.519 52.381 0.00 0.00 0.00 3.18
8806 9982 1.112113 GAGGCGAGGACATTAGGTGA 58.888 55.000 0.00 0.00 0.00 4.02
8807 9983 1.115467 AGAGGCGAGGACATTAGGTG 58.885 55.000 0.00 0.00 0.00 4.00
8808 9984 2.588620 CTAGAGGCGAGGACATTAGGT 58.411 52.381 0.00 0.00 0.00 3.08
8809 9985 1.271102 GCTAGAGGCGAGGACATTAGG 59.729 57.143 0.00 0.00 0.00 2.69
8810 9986 1.957177 TGCTAGAGGCGAGGACATTAG 59.043 52.381 0.00 0.00 45.43 1.73
8811 9987 2.067365 TGCTAGAGGCGAGGACATTA 57.933 50.000 0.00 0.00 45.43 1.90
8812 9988 1.137872 CTTGCTAGAGGCGAGGACATT 59.862 52.381 0.00 0.00 46.09 2.71
8813 9989 0.749649 CTTGCTAGAGGCGAGGACAT 59.250 55.000 0.00 0.00 46.09 3.06
8814 9990 2.193532 CTTGCTAGAGGCGAGGACA 58.806 57.895 0.00 0.00 46.09 4.02
8819 9995 0.685097 AACAACCTTGCTAGAGGCGA 59.315 50.000 0.00 0.00 45.43 5.54
8820 9996 0.798776 CAACAACCTTGCTAGAGGCG 59.201 55.000 0.00 0.00 45.43 5.52
8821 9997 1.807142 GACAACAACCTTGCTAGAGGC 59.193 52.381 0.00 0.00 40.65 4.70
8822 9998 3.409026 AGACAACAACCTTGCTAGAGG 57.591 47.619 0.00 0.00 42.75 3.69
8823 9999 6.128172 CCAATTAGACAACAACCTTGCTAGAG 60.128 42.308 0.00 0.00 0.00 2.43
8824 10000 5.705441 CCAATTAGACAACAACCTTGCTAGA 59.295 40.000 0.00 0.00 0.00 2.43
8825 10001 5.705441 TCCAATTAGACAACAACCTTGCTAG 59.295 40.000 0.00 0.00 0.00 3.42
8826 10002 5.626142 TCCAATTAGACAACAACCTTGCTA 58.374 37.500 0.00 0.00 0.00 3.49
8827 10003 4.469657 TCCAATTAGACAACAACCTTGCT 58.530 39.130 0.00 0.00 0.00 3.91
8828 10004 4.798574 CTCCAATTAGACAACAACCTTGC 58.201 43.478 0.00 0.00 0.00 4.01
8829 10005 4.278170 TGCTCCAATTAGACAACAACCTTG 59.722 41.667 0.00 0.00 0.00 3.61
8830 10006 4.469657 TGCTCCAATTAGACAACAACCTT 58.530 39.130 0.00 0.00 0.00 3.50
8831 10007 4.074970 CTGCTCCAATTAGACAACAACCT 58.925 43.478 0.00 0.00 0.00 3.50
8832 10008 3.191371 CCTGCTCCAATTAGACAACAACC 59.809 47.826 0.00 0.00 0.00 3.77
8833 10009 4.072131 TCCTGCTCCAATTAGACAACAAC 58.928 43.478 0.00 0.00 0.00 3.32
8834 10010 4.365514 TCCTGCTCCAATTAGACAACAA 57.634 40.909 0.00 0.00 0.00 2.83
8835 10011 4.365514 TTCCTGCTCCAATTAGACAACA 57.634 40.909 0.00 0.00 0.00 3.33
8836 10012 4.943705 TGATTCCTGCTCCAATTAGACAAC 59.056 41.667 0.00 0.00 0.00 3.32
8847 10023 5.009110 GCCTTTTAGTATTGATTCCTGCTCC 59.991 44.000 0.00 0.00 0.00 4.70
8860 11252 2.241430 GAGGGTGGGTGCCTTTTAGTAT 59.759 50.000 0.00 0.00 0.00 2.12
8909 11301 1.503542 CCTTGCACGGCATCTCAAC 59.496 57.895 0.00 0.00 38.76 3.18
8948 11341 5.557891 AAAGGATGAATTGAAGCTTCGAG 57.442 39.130 20.82 0.00 0.00 4.04
8991 12096 7.630470 TTGAATTTGCAATTTAGGTACGTTG 57.370 32.000 0.00 0.00 0.00 4.10
8996 12101 9.606631 AAGTTGTTTGAATTTGCAATTTAGGTA 57.393 25.926 0.00 0.00 0.00 3.08
9043 12148 9.920946 ACCTCACTATCAATGGTTATATTTTGT 57.079 29.630 0.00 0.00 0.00 2.83
9076 12181 6.011476 AGTTCTAAGAGTAACGAAGTGACC 57.989 41.667 0.00 0.00 44.84 4.02
9124 12229 6.607019 AGGTTTAAGGTTAACCAAGTCATCA 58.393 36.000 26.26 0.00 46.01 3.07
9137 12242 2.651382 AGTTGGCGAGGTTTAAGGTT 57.349 45.000 0.00 0.00 0.00 3.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.