Multiple sequence alignment - TraesCS6B01G368400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G368400 chr6B 100.000 5120 0 0 1 5120 642730933 642725814 0.000000e+00 9455.0
1 TraesCS6B01G368400 chr6B 95.349 516 24 0 1605 2120 36070525 36070010 0.000000e+00 821.0
2 TraesCS6B01G368400 chr6B 96.875 32 1 0 5089 5120 260542842 260542873 3.000000e-03 54.7
3 TraesCS6B01G368400 chr6B 100.000 29 0 0 5092 5120 495431396 495431368 3.000000e-03 54.7
4 TraesCS6B01G368400 chr6A 92.073 2624 147 28 2244 4854 571687146 571684571 0.000000e+00 3637.0
5 TraesCS6B01G368400 chr6A 92.417 1121 59 12 1021 2120 571688339 571687224 0.000000e+00 1576.0
6 TraesCS6B01G368400 chr6A 88.261 460 47 6 1 455 571690138 571689681 1.250000e-150 544.0
7 TraesCS6B01G368400 chr6A 84.916 358 42 8 579 926 571689405 571689050 8.160000e-93 351.0
8 TraesCS6B01G368400 chr6A 100.000 90 0 0 2116 2205 484569502 484569591 3.170000e-37 167.0
9 TraesCS6B01G368400 chr6A 96.117 103 2 2 4996 5097 571684586 571684485 3.170000e-37 167.0
10 TraesCS6B01G368400 chr6D 91.692 2636 164 22 2244 4854 426988495 426985890 0.000000e+00 3603.0
11 TraesCS6B01G368400 chr6D 92.131 1436 62 18 709 2114 426989990 426988576 0.000000e+00 1978.0
12 TraesCS6B01G368400 chr6D 90.632 459 35 5 1 455 426991014 426990560 2.040000e-168 603.0
13 TraesCS6B01G368400 chr6D 89.399 283 8 10 4837 5098 426985786 426985505 2.280000e-88 337.0
14 TraesCS6B01G368400 chr6D 88.325 197 17 5 456 652 426990188 426989998 1.110000e-56 231.0
15 TraesCS6B01G368400 chr6D 95.192 104 3 2 4996 5098 426985905 426985803 4.100000e-36 163.0
16 TraesCS6B01G368400 chr4A 95.543 516 23 0 1605 2120 740429431 740429946 0.000000e+00 826.0
17 TraesCS6B01G368400 chr4A 94.898 98 5 0 2108 2205 668943961 668943864 2.470000e-33 154.0
18 TraesCS6B01G368400 chr1B 95.543 516 23 0 1605 2120 105657315 105657830 0.000000e+00 826.0
19 TraesCS6B01G368400 chr1B 95.155 516 25 0 1605 2120 240276829 240276314 0.000000e+00 815.0
20 TraesCS6B01G368400 chr2A 95.543 516 22 1 1605 2120 711309591 711309077 0.000000e+00 824.0
21 TraesCS6B01G368400 chr2A 78.931 318 46 12 4611 4915 679995756 679995447 4.040000e-46 196.0
22 TraesCS6B01G368400 chr4B 95.155 516 25 0 1605 2120 171194701 171195216 0.000000e+00 815.0
23 TraesCS6B01G368400 chr4B 95.918 49 2 0 208 256 161519288 161519240 4.250000e-11 80.5
24 TraesCS6B01G368400 chr2B 95.155 516 25 0 1605 2120 241231612 241232127 0.000000e+00 815.0
25 TraesCS6B01G368400 chr2B 94.961 516 26 0 1605 2120 66074601 66074086 0.000000e+00 809.0
26 TraesCS6B01G368400 chr2B 95.833 96 3 1 2117 2211 8673930 8674025 2.470000e-33 154.0
27 TraesCS6B01G368400 chr2B 94.898 98 3 2 2116 2213 182712415 182712510 8.880000e-33 152.0
28 TraesCS6B01G368400 chr2B 93.137 102 7 0 2106 2207 13713008 13713109 3.190000e-32 150.0
29 TraesCS6B01G368400 chr2B 92.157 51 4 0 206 256 175629148 175629198 7.110000e-09 73.1
30 TraesCS6B01G368400 chrUn 100.000 88 0 0 2117 2204 394816398 394816485 4.100000e-36 163.0
31 TraesCS6B01G368400 chrUn 94.949 99 3 2 2117 2215 17061956 17061860 2.470000e-33 154.0
32 TraesCS6B01G368400 chr3B 100.000 88 0 0 2117 2204 71403746 71403659 4.100000e-36 163.0
33 TraesCS6B01G368400 chr5D 96.809 94 3 0 2112 2205 253048866 253048773 1.910000e-34 158.0
34 TraesCS6B01G368400 chr5D 96.774 31 1 0 5090 5120 7945775 7945805 9.000000e-03 52.8
35 TraesCS6B01G368400 chr7B 89.286 56 5 1 204 258 547279300 547279245 9.200000e-08 69.4
36 TraesCS6B01G368400 chr7B 100.000 30 0 0 5090 5119 721222771 721222742 7.160000e-04 56.5
37 TraesCS6B01G368400 chr7A 100.000 35 0 0 222 256 672021788 672021754 1.190000e-06 65.8
38 TraesCS6B01G368400 chr5A 90.000 50 5 0 207 256 139936009 139936058 1.190000e-06 65.8
39 TraesCS6B01G368400 chr5A 100.000 29 0 0 5092 5120 115018033 115018061 3.000000e-03 54.7
40 TraesCS6B01G368400 chr3D 88.679 53 6 0 201 253 70708731 70708783 1.190000e-06 65.8
41 TraesCS6B01G368400 chr7D 94.872 39 2 0 208 246 3226635 3226597 1.540000e-05 62.1
42 TraesCS6B01G368400 chr5B 100.000 29 0 0 5092 5120 321471731 321471759 3.000000e-03 54.7
43 TraesCS6B01G368400 chr2D 100.000 29 0 0 5092 5120 298294705 298294677 3.000000e-03 54.7
44 TraesCS6B01G368400 chr2D 96.774 31 1 0 5090 5120 407219716 407219746 9.000000e-03 52.8
45 TraesCS6B01G368400 chr4D 100.000 28 0 0 5093 5120 329006137 329006110 9.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G368400 chr6B 642725814 642730933 5119 True 9455.0 9455 100.0000 1 5120 1 chr6B.!!$R3 5119
1 TraesCS6B01G368400 chr6B 36070010 36070525 515 True 821.0 821 95.3490 1605 2120 1 chr6B.!!$R1 515
2 TraesCS6B01G368400 chr6A 571684485 571690138 5653 True 1255.0 3637 90.7568 1 5097 5 chr6A.!!$R1 5096
3 TraesCS6B01G368400 chr6D 426985505 426991014 5509 True 1152.5 3603 91.2285 1 5098 6 chr6D.!!$R1 5097
4 TraesCS6B01G368400 chr4A 740429431 740429946 515 False 826.0 826 95.5430 1605 2120 1 chr4A.!!$F1 515
5 TraesCS6B01G368400 chr1B 105657315 105657830 515 False 826.0 826 95.5430 1605 2120 1 chr1B.!!$F1 515
6 TraesCS6B01G368400 chr1B 240276314 240276829 515 True 815.0 815 95.1550 1605 2120 1 chr1B.!!$R1 515
7 TraesCS6B01G368400 chr2A 711309077 711309591 514 True 824.0 824 95.5430 1605 2120 1 chr2A.!!$R2 515
8 TraesCS6B01G368400 chr4B 171194701 171195216 515 False 815.0 815 95.1550 1605 2120 1 chr4B.!!$F1 515
9 TraesCS6B01G368400 chr2B 241231612 241232127 515 False 815.0 815 95.1550 1605 2120 1 chr2B.!!$F5 515
10 TraesCS6B01G368400 chr2B 66074086 66074601 515 True 809.0 809 94.9610 1605 2120 1 chr2B.!!$R1 515

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
990 1442 0.393820 TACCCTTTTTCGGTGAGCGT 59.606 50.000 3.3 0.0 34.66 5.07 F
2130 3178 0.751452 GGTGATACTCCCTCCGTTCC 59.249 60.000 0.0 0.0 0.00 3.62 F
2418 3513 1.299976 CCTGGTTAGTGTCCTGCCC 59.700 63.158 0.0 0.0 0.00 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2396 3490 0.400213 CAGGACACTAACCAGGCCAA 59.600 55.0 5.01 0.0 0.00 4.52 R
3070 4170 0.451783 ATCGAATTGCGCCCTGTTTC 59.548 50.0 4.18 0.0 40.61 2.78 R
4124 5227 0.461548 CCGCTGAGGACTGCTATTCA 59.538 55.0 0.00 0.0 45.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
193 197 5.525484 TCTAGCCAGGTTCCTTAGTTCATA 58.475 41.667 0.00 0.00 0.00 2.15
216 220 3.381908 CCTCGCTACAATGTACTTCCTCT 59.618 47.826 0.00 0.00 0.00 3.69
219 223 4.219944 TCGCTACAATGTACTTCCTCTGTT 59.780 41.667 0.00 0.00 0.00 3.16
267 271 6.071952 GGATAAAAATGGATATGTGGCATCGT 60.072 38.462 0.00 0.00 0.00 3.73
269 273 2.479566 ATGGATATGTGGCATCGTCC 57.520 50.000 0.00 0.00 0.00 4.79
301 305 2.293318 TGGAGGCTCGAGCATGGTT 61.293 57.895 36.27 17.11 44.36 3.67
380 384 2.154462 CACGGCAAAGAAGGAGAATGT 58.846 47.619 0.00 0.00 0.00 2.71
384 388 4.229876 CGGCAAAGAAGGAGAATGTTTTC 58.770 43.478 0.00 0.00 0.00 2.29
443 448 1.589716 GAGGCTGGATGGTTGCACAC 61.590 60.000 0.00 0.00 0.00 3.82
459 836 2.100252 GCACACATATGCAGGCAAAGAT 59.900 45.455 1.58 0.00 45.39 2.40
474 851 5.940470 AGGCAAAGATAGTCGAAAATTGAGT 59.060 36.000 0.00 0.00 0.00 3.41
484 861 5.176958 AGTCGAAAATTGAGTAACCACTTCG 59.823 40.000 0.00 0.00 34.21 3.79
485 862 5.050567 GTCGAAAATTGAGTAACCACTTCGT 60.051 40.000 0.00 0.00 34.21 3.85
489 866 5.862924 AATTGAGTAACCACTTCGTCATG 57.137 39.130 0.00 0.00 34.21 3.07
490 867 4.330944 TTGAGTAACCACTTCGTCATGT 57.669 40.909 0.00 0.00 34.21 3.21
491 868 5.456548 TTGAGTAACCACTTCGTCATGTA 57.543 39.130 0.00 0.00 34.21 2.29
492 869 5.055642 TGAGTAACCACTTCGTCATGTAG 57.944 43.478 0.00 0.00 34.21 2.74
511 888 1.274167 AGATGCGTGGGTTCGTAGAAA 59.726 47.619 0.00 0.00 45.90 2.52
512 889 1.392510 GATGCGTGGGTTCGTAGAAAC 59.607 52.381 0.00 0.00 45.90 2.78
515 892 1.869132 GCGTGGGTTCGTAGAAACTTT 59.131 47.619 0.00 0.00 45.90 2.66
516 893 2.349155 GCGTGGGTTCGTAGAAACTTTG 60.349 50.000 0.00 0.00 45.90 2.77
517 894 2.349155 CGTGGGTTCGTAGAAACTTTGC 60.349 50.000 0.00 0.00 45.90 3.68
518 895 2.614983 GTGGGTTCGTAGAAACTTTGCA 59.385 45.455 0.00 0.00 45.90 4.08
519 896 2.875933 TGGGTTCGTAGAAACTTTGCAG 59.124 45.455 0.00 0.00 45.90 4.41
520 897 2.350484 GGGTTCGTAGAAACTTTGCAGC 60.350 50.000 0.00 0.00 45.90 5.25
522 899 3.242936 GGTTCGTAGAAACTTTGCAGCAA 60.243 43.478 2.83 2.83 45.90 3.91
572 949 8.383318 ACGATGTATAATACGTGTACTAACCT 57.617 34.615 0.00 0.00 37.58 3.50
619 996 8.674607 GCATTATTACAATATTGCCCCTACTAC 58.325 37.037 15.48 0.00 40.06 2.73
620 997 9.733556 CATTATTACAATATTGCCCCTACTACA 57.266 33.333 15.48 0.00 0.00 2.74
658 1037 5.582269 ACCACACATCATACATTTTCTCTCG 59.418 40.000 0.00 0.00 0.00 4.04
661 1040 4.268644 CACATCATACATTTTCTCTCGCGT 59.731 41.667 5.77 0.00 0.00 6.01
677 1056 1.840141 CGCGTGCAGCTAATTTTAAGC 59.160 47.619 0.00 0.00 45.59 3.09
696 1075 9.621629 TTTTAAGCCGATTAAGATTTCTCCATA 57.378 29.630 0.00 0.00 34.86 2.74
698 1077 7.678947 AAGCCGATTAAGATTTCTCCATATG 57.321 36.000 0.00 0.00 0.00 1.78
701 1080 6.092807 GCCGATTAAGATTTCTCCATATGTCC 59.907 42.308 1.24 0.00 0.00 4.02
727 1106 5.121768 GCAACTAATTTTGAGCCGACTAAGA 59.878 40.000 0.00 0.00 0.00 2.10
763 1144 1.067495 GCAGCCAAGTCTAAGTCGACT 60.067 52.381 13.58 13.58 45.73 4.18
787 1171 5.636121 TGAGATTTCAATTCAGCATTTGTGC 59.364 36.000 0.00 0.00 0.00 4.57
829 1213 9.846248 CTCATGTAGAAACCTTATTCCAAAAAG 57.154 33.333 0.00 0.00 0.00 2.27
956 1404 2.613482 GGAACCAACCCTCTCCCCC 61.613 68.421 0.00 0.00 0.00 5.40
986 1438 3.642848 ACTACAGTACCCTTTTTCGGTGA 59.357 43.478 0.00 0.00 34.66 4.02
990 1442 0.393820 TACCCTTTTTCGGTGAGCGT 59.606 50.000 3.30 0.00 34.66 5.07
1578 2595 1.826385 CGGAAATGCTGGAGGTTTCT 58.174 50.000 0.00 0.00 33.51 2.52
1580 2597 2.095059 CGGAAATGCTGGAGGTTTCTTG 60.095 50.000 0.00 0.00 33.51 3.02
1742 2764 2.223044 CGGTGCCTCTTTTAGCGAATTC 60.223 50.000 0.00 0.00 37.49 2.17
1766 2788 3.408634 GGATTTCTTTGTCGGTCTTGGA 58.591 45.455 0.00 0.00 0.00 3.53
1767 2789 3.818773 GGATTTCTTTGTCGGTCTTGGAA 59.181 43.478 0.00 0.00 0.00 3.53
1796 2831 3.557595 GGTGGATAATCTGAGCTCGTTTG 59.442 47.826 9.64 0.00 0.00 2.93
1861 2901 1.295020 TGTGGTTGGGGAGATTAGGG 58.705 55.000 0.00 0.00 0.00 3.53
1958 3003 5.841810 ACATAATTTCACCGGCATTAATGG 58.158 37.500 17.02 3.25 0.00 3.16
1993 3041 7.516198 ACTAATTTGTGAATGCTGAGTTTCT 57.484 32.000 0.00 0.00 0.00 2.52
1997 3045 7.704789 ATTTGTGAATGCTGAGTTTCTTTTC 57.295 32.000 0.00 0.00 0.00 2.29
2006 3054 5.030936 GCTGAGTTTCTTTTCACTTGTCAC 58.969 41.667 0.00 0.00 0.00 3.67
2044 3092 8.017946 GTGAGATTCAAAGGTTTCAGTGAATAC 58.982 37.037 6.36 7.85 40.03 1.89
2120 3168 6.494893 TTTGTGTATGCTTTGGTGATACTC 57.505 37.500 0.00 0.00 0.00 2.59
2121 3169 4.513442 TGTGTATGCTTTGGTGATACTCC 58.487 43.478 0.00 0.00 0.00 3.85
2122 3170 3.877508 GTGTATGCTTTGGTGATACTCCC 59.122 47.826 0.00 0.00 0.00 4.30
2123 3171 3.780294 TGTATGCTTTGGTGATACTCCCT 59.220 43.478 0.00 0.00 0.00 4.20
2124 3172 3.567478 ATGCTTTGGTGATACTCCCTC 57.433 47.619 0.00 0.00 0.00 4.30
2125 3173 1.559682 TGCTTTGGTGATACTCCCTCC 59.440 52.381 0.00 0.00 0.00 4.30
2126 3174 1.473434 GCTTTGGTGATACTCCCTCCG 60.473 57.143 0.00 0.00 0.00 4.63
2127 3175 1.831736 CTTTGGTGATACTCCCTCCGT 59.168 52.381 0.00 0.00 0.00 4.69
2128 3176 1.946984 TTGGTGATACTCCCTCCGTT 58.053 50.000 0.00 0.00 0.00 4.44
2129 3177 1.481871 TGGTGATACTCCCTCCGTTC 58.518 55.000 0.00 0.00 0.00 3.95
2130 3178 0.751452 GGTGATACTCCCTCCGTTCC 59.249 60.000 0.00 0.00 0.00 3.62
2131 3179 1.481871 GTGATACTCCCTCCGTTCCA 58.518 55.000 0.00 0.00 0.00 3.53
2132 3180 1.829222 GTGATACTCCCTCCGTTCCAA 59.171 52.381 0.00 0.00 0.00 3.53
2133 3181 2.235402 GTGATACTCCCTCCGTTCCAAA 59.765 50.000 0.00 0.00 0.00 3.28
2134 3182 2.907696 TGATACTCCCTCCGTTCCAAAA 59.092 45.455 0.00 0.00 0.00 2.44
2135 3183 3.521937 TGATACTCCCTCCGTTCCAAAAT 59.478 43.478 0.00 0.00 0.00 1.82
2136 3184 4.717778 TGATACTCCCTCCGTTCCAAAATA 59.282 41.667 0.00 0.00 0.00 1.40
2137 3185 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
2138 3186 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
2139 3187 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
2140 3188 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
2141 3189 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
2142 3190 4.412199 TCCCTCCGTTCCAAAATAGATGAT 59.588 41.667 0.00 0.00 0.00 2.45
2143 3191 4.757149 CCCTCCGTTCCAAAATAGATGATC 59.243 45.833 0.00 0.00 0.00 2.92
2144 3192 4.757149 CCTCCGTTCCAAAATAGATGATCC 59.243 45.833 0.00 0.00 0.00 3.36
2145 3193 5.366482 TCCGTTCCAAAATAGATGATCCA 57.634 39.130 0.00 0.00 0.00 3.41
2146 3194 5.750524 TCCGTTCCAAAATAGATGATCCAA 58.249 37.500 0.00 0.00 0.00 3.53
2147 3195 5.588648 TCCGTTCCAAAATAGATGATCCAAC 59.411 40.000 0.00 0.00 0.00 3.77
2148 3196 5.590259 CCGTTCCAAAATAGATGATCCAACT 59.410 40.000 0.00 0.00 0.00 3.16
2149 3197 6.095440 CCGTTCCAAAATAGATGATCCAACTT 59.905 38.462 0.00 0.00 0.00 2.66
2150 3198 7.362920 CCGTTCCAAAATAGATGATCCAACTTT 60.363 37.037 0.00 0.00 0.00 2.66
2151 3199 7.485913 CGTTCCAAAATAGATGATCCAACTTTG 59.514 37.037 0.00 0.00 0.00 2.77
2152 3200 8.306761 GTTCCAAAATAGATGATCCAACTTTGT 58.693 33.333 0.00 0.00 0.00 2.83
2153 3201 9.527157 TTCCAAAATAGATGATCCAACTTTGTA 57.473 29.630 0.00 0.00 0.00 2.41
2154 3202 8.956426 TCCAAAATAGATGATCCAACTTTGTAC 58.044 33.333 0.00 0.00 0.00 2.90
2155 3203 8.960591 CCAAAATAGATGATCCAACTTTGTACT 58.039 33.333 0.00 0.00 0.00 2.73
2159 3207 9.614792 AATAGATGATCCAACTTTGTACTAACC 57.385 33.333 0.00 0.00 0.00 2.85
2160 3208 7.259088 AGATGATCCAACTTTGTACTAACCT 57.741 36.000 0.00 0.00 0.00 3.50
2161 3209 7.690256 AGATGATCCAACTTTGTACTAACCTT 58.310 34.615 0.00 0.00 0.00 3.50
2162 3210 8.822805 AGATGATCCAACTTTGTACTAACCTTA 58.177 33.333 0.00 0.00 0.00 2.69
2163 3211 9.099454 GATGATCCAACTTTGTACTAACCTTAG 57.901 37.037 0.00 0.00 36.82 2.18
2164 3212 7.970102 TGATCCAACTTTGTACTAACCTTAGT 58.030 34.615 3.29 3.29 45.39 2.24
2165 3213 9.092338 TGATCCAACTTTGTACTAACCTTAGTA 57.908 33.333 1.45 1.45 43.36 1.82
2176 3224 6.505048 ACTAACCTTAGTACAAAGTTGGGT 57.495 37.500 0.00 0.00 41.92 4.51
2177 3225 6.528321 ACTAACCTTAGTACAAAGTTGGGTC 58.472 40.000 0.00 0.00 41.92 4.46
2178 3226 5.376756 AACCTTAGTACAAAGTTGGGTCA 57.623 39.130 0.00 0.00 0.00 4.02
2179 3227 5.578157 ACCTTAGTACAAAGTTGGGTCAT 57.422 39.130 0.00 0.00 0.00 3.06
2180 3228 5.557866 ACCTTAGTACAAAGTTGGGTCATC 58.442 41.667 0.00 0.00 0.00 2.92
2181 3229 5.309806 ACCTTAGTACAAAGTTGGGTCATCT 59.690 40.000 0.00 0.00 0.00 2.90
2182 3230 6.499350 ACCTTAGTACAAAGTTGGGTCATCTA 59.501 38.462 0.00 0.00 0.00 1.98
2183 3231 7.182206 ACCTTAGTACAAAGTTGGGTCATCTAT 59.818 37.037 0.00 0.00 0.00 1.98
2184 3232 8.047310 CCTTAGTACAAAGTTGGGTCATCTATT 58.953 37.037 0.00 0.00 0.00 1.73
2185 3233 9.449719 CTTAGTACAAAGTTGGGTCATCTATTT 57.550 33.333 0.00 0.00 0.00 1.40
2186 3234 9.802039 TTAGTACAAAGTTGGGTCATCTATTTT 57.198 29.630 0.00 0.00 0.00 1.82
2187 3235 8.110860 AGTACAAAGTTGGGTCATCTATTTTG 57.889 34.615 0.00 0.00 0.00 2.44
2188 3236 6.345096 ACAAAGTTGGGTCATCTATTTTGG 57.655 37.500 0.00 0.00 0.00 3.28
2189 3237 6.074648 ACAAAGTTGGGTCATCTATTTTGGA 58.925 36.000 0.00 0.00 0.00 3.53
2190 3238 6.553100 ACAAAGTTGGGTCATCTATTTTGGAA 59.447 34.615 0.00 0.00 0.00 3.53
2191 3239 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
2192 3240 4.700213 AGTTGGGTCATCTATTTTGGAACG 59.300 41.667 0.00 0.00 0.00 3.95
2193 3241 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
2194 3242 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
2195 3243 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
2196 3244 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
2197 3245 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
2198 3246 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
2199 3247 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
2200 3248 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
2201 3249 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
2202 3250 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
2203 3251 2.019807 TTTGGAACGGAGGGAGTACT 57.980 50.000 0.00 0.00 0.00 2.73
2226 3274 3.244215 TGTCTTAGGAAAGCTGACACTGG 60.244 47.826 0.00 0.00 33.45 4.00
2240 3288 9.515226 AAGCTGACACTGGTTTTATCTAATTAA 57.485 29.630 0.00 0.00 0.00 1.40
2241 3289 9.167311 AGCTGACACTGGTTTTATCTAATTAAG 57.833 33.333 0.00 0.00 0.00 1.85
2242 3290 8.947115 GCTGACACTGGTTTTATCTAATTAAGT 58.053 33.333 0.00 0.00 0.00 2.24
2390 3484 7.832685 AGTATTATCAGGTGTCTGTGTAGTGTA 59.167 37.037 0.00 0.00 41.59 2.90
2396 3490 4.077822 GGTGTCTGTGTAGTGTAGTAGGT 58.922 47.826 0.00 0.00 0.00 3.08
2400 3494 3.508793 TCTGTGTAGTGTAGTAGGTTGGC 59.491 47.826 0.00 0.00 0.00 4.52
2411 3505 1.350019 GTAGGTTGGCCTGGTTAGTGT 59.650 52.381 3.32 0.00 46.47 3.55
2418 3513 1.299976 CCTGGTTAGTGTCCTGCCC 59.700 63.158 0.00 0.00 0.00 5.36
2498 3593 4.173256 GTGACGTGACATCATACACATCA 58.827 43.478 0.00 0.00 36.99 3.07
2507 3602 5.434408 ACATCATACACATCATGCTCTTGT 58.566 37.500 0.00 0.00 0.00 3.16
2511 3606 7.059202 TCATACACATCATGCTCTTGTAGAT 57.941 36.000 0.00 0.00 0.00 1.98
2518 3613 7.010460 CACATCATGCTCTTGTAGATTTACGAA 59.990 37.037 0.00 0.00 32.21 3.85
2522 3617 6.647212 TGCTCTTGTAGATTTACGAATGTG 57.353 37.500 0.00 0.00 32.21 3.21
2546 3641 1.731709 TGTCGTCAAAATGGATGCTCG 59.268 47.619 0.00 0.00 0.00 5.03
2565 3660 7.561237 TGCTCGTTTTAGTAATGAAATTTGC 57.439 32.000 0.00 0.00 37.87 3.68
2585 3680 5.086104 TGCTCTGTTAGTAACTCAATCCC 57.914 43.478 14.00 0.00 0.00 3.85
2645 3741 7.864379 CCATCCATTCTGCAGTTTATTCATAAC 59.136 37.037 14.67 0.00 0.00 1.89
2652 3748 6.149308 TCTGCAGTTTATTCATAACACCACTG 59.851 38.462 14.67 5.34 33.62 3.66
2663 3759 6.054941 TCATAACACCACTGCGATCAATTAT 58.945 36.000 0.00 0.00 0.00 1.28
2834 3930 8.458843 GTTTGTGTATACATAAACCTGAATGCT 58.541 33.333 32.11 0.00 45.87 3.79
2845 3941 6.839124 AAACCTGAATGCTGTCATTTATCA 57.161 33.333 0.00 0.00 42.60 2.15
2913 4013 4.857509 AAAATGGGCGCACTAACTTTTA 57.142 36.364 12.74 0.00 0.00 1.52
2926 4026 8.765219 CGCACTAACTTTTAGCATGTAATCTAT 58.235 33.333 0.00 0.00 0.00 1.98
2945 4045 6.814954 TCTATGGATCAGCCTTAGTTTCTT 57.185 37.500 2.01 0.00 42.32 2.52
3070 4170 2.086869 GGTGGTGATCAAGTCATGTGG 58.913 52.381 0.00 0.00 39.48 4.17
3437 4537 0.690192 TGGCAAGTCCGGATCTTTCA 59.310 50.000 7.81 10.62 37.80 2.69
3700 4800 1.892819 CTCAGAAGCTGCCTTCCCGA 61.893 60.000 0.00 0.00 46.97 5.14
3703 4803 3.296709 GAAGCTGCCTTCCCGACGA 62.297 63.158 0.00 0.00 41.30 4.20
3911 5011 4.057428 GGGCGTCGCTCTGTCAGT 62.057 66.667 18.11 0.00 0.00 3.41
3912 5012 2.505118 GGCGTCGCTCTGTCAGTC 60.505 66.667 18.11 0.00 0.00 3.51
3913 5013 2.505118 GCGTCGCTCTGTCAGTCC 60.505 66.667 10.68 0.00 0.00 3.85
3985 5088 0.458669 GAATGGTGCCCTGATGCTTG 59.541 55.000 0.00 0.00 0.00 4.01
3986 5089 1.610554 AATGGTGCCCTGATGCTTGC 61.611 55.000 0.00 0.00 0.00 4.01
3987 5090 3.818787 GGTGCCCTGATGCTTGCG 61.819 66.667 0.00 0.00 0.00 4.85
3988 5091 3.818787 GTGCCCTGATGCTTGCGG 61.819 66.667 0.00 0.00 0.00 5.69
4071 5174 2.739379 CTGGAAGCGTTCTCTTTCCTTC 59.261 50.000 4.36 0.00 33.07 3.46
4076 5179 4.073293 AGCGTTCTCTTTCCTTCTTTCA 57.927 40.909 0.00 0.00 0.00 2.69
4124 5227 3.181451 TGAACATCTGAGAAACTGGTGCT 60.181 43.478 0.00 0.00 32.87 4.40
4127 5230 3.181451 ACATCTGAGAAACTGGTGCTGAA 60.181 43.478 0.00 0.00 32.87 3.02
4243 5347 0.947244 GTTGCCCTCACTCACTGTTG 59.053 55.000 0.00 0.00 0.00 3.33
4264 5368 1.323412 CCTCTCCGTCCCTGTATCTG 58.677 60.000 0.00 0.00 0.00 2.90
4280 5384 4.464597 TGTATCTGTATGTGTGGCACTGTA 59.535 41.667 19.83 5.36 35.11 2.74
4290 5395 3.003378 GTGTGGCACTGTAGGTTTTCTTC 59.997 47.826 19.83 0.00 0.00 2.87
4306 5411 0.890996 CTTCTTGTTGCCGGCCTCTT 60.891 55.000 26.77 0.00 0.00 2.85
4307 5412 1.172180 TTCTTGTTGCCGGCCTCTTG 61.172 55.000 26.77 11.78 0.00 3.02
4316 5421 2.034879 CGGCCTCTTGTGCGAACAT 61.035 57.895 0.00 0.00 0.00 2.71
4319 5424 0.370273 GCCTCTTGTGCGAACATACG 59.630 55.000 0.00 0.00 0.00 3.06
4324 5429 2.473609 TCTTGTGCGAACATACGTTGTC 59.526 45.455 0.00 0.00 37.68 3.18
4328 5433 2.473609 GTGCGAACATACGTTGTCTGAA 59.526 45.455 0.00 0.00 37.68 3.02
4330 5435 2.473609 GCGAACATACGTTGTCTGAACA 59.526 45.455 0.00 0.00 37.68 3.18
4337 5442 1.202533 ACGTTGTCTGAACAGGTGGAG 60.203 52.381 1.93 0.00 36.57 3.86
4342 5447 1.277557 GTCTGAACAGGTGGAGATGCT 59.722 52.381 1.93 0.00 0.00 3.79
4363 5468 5.011431 TGCTGAAGAGAAGAAGACATGAAGA 59.989 40.000 0.00 0.00 0.00 2.87
4364 5469 5.931146 GCTGAAGAGAAGAAGACATGAAGAA 59.069 40.000 0.00 0.00 0.00 2.52
4366 5471 7.060383 TGAAGAGAAGAAGACATGAAGAAGT 57.940 36.000 0.00 0.00 0.00 3.01
4367 5472 7.151308 TGAAGAGAAGAAGACATGAAGAAGTC 58.849 38.462 0.00 0.00 35.02 3.01
4368 5473 5.708948 AGAGAAGAAGACATGAAGAAGTCG 58.291 41.667 0.00 0.00 39.67 4.18
4369 5474 5.475220 AGAGAAGAAGACATGAAGAAGTCGA 59.525 40.000 0.00 0.00 39.67 4.20
4370 5475 5.708948 AGAAGAAGACATGAAGAAGTCGAG 58.291 41.667 0.00 0.00 39.67 4.04
4371 5476 5.475220 AGAAGAAGACATGAAGAAGTCGAGA 59.525 40.000 0.00 0.00 39.67 4.04
4372 5477 5.713792 AGAAGACATGAAGAAGTCGAGAA 57.286 39.130 0.00 0.00 39.67 2.87
4373 5478 5.708948 AGAAGACATGAAGAAGTCGAGAAG 58.291 41.667 0.00 0.00 39.67 2.85
4374 5479 5.475220 AGAAGACATGAAGAAGTCGAGAAGA 59.525 40.000 0.00 0.00 39.67 2.87
4389 5498 4.926238 TCGAGAAGAAAGATGAAGCTGAAC 59.074 41.667 0.00 0.00 0.00 3.18
4390 5499 4.687948 CGAGAAGAAAGATGAAGCTGAACA 59.312 41.667 0.00 0.00 0.00 3.18
4397 5506 1.203287 GATGAAGCTGAACAAAGGGCC 59.797 52.381 0.00 0.00 0.00 5.80
4403 5512 1.928868 CTGAACAAAGGGCCAAGGAT 58.071 50.000 6.18 0.00 0.00 3.24
4410 5521 1.928868 AAGGGCCAAGGATTGTCAAG 58.071 50.000 6.18 0.00 46.99 3.02
4423 5534 1.388547 TGTCAAGTGGTTTCACAGGC 58.611 50.000 0.00 0.00 45.91 4.85
4437 5548 3.655211 AGGCCTGGCTGGAACTGG 61.655 66.667 19.68 0.00 38.35 4.00
4445 5556 3.094572 CTGGCTGGAACTGGATTTTCAT 58.905 45.455 0.00 0.00 0.00 2.57
4446 5557 3.509442 TGGCTGGAACTGGATTTTCATT 58.491 40.909 0.00 0.00 0.00 2.57
4447 5558 3.511146 TGGCTGGAACTGGATTTTCATTC 59.489 43.478 0.00 0.00 0.00 2.67
4459 5570 5.718130 TGGATTTTCATTCTTCAGGCTCATT 59.282 36.000 0.00 0.00 0.00 2.57
4460 5571 6.040878 GGATTTTCATTCTTCAGGCTCATTG 58.959 40.000 0.00 0.00 0.00 2.82
4461 5572 5.395682 TTTTCATTCTTCAGGCTCATTGG 57.604 39.130 0.00 0.00 0.00 3.16
4470 5581 3.509442 TCAGGCTCATTGGTTCCATTTT 58.491 40.909 0.00 0.00 0.00 1.82
4471 5582 3.903090 TCAGGCTCATTGGTTCCATTTTT 59.097 39.130 0.00 0.00 0.00 1.94
4497 5615 4.681744 CTCTACAGAAACCTCAGATGCTC 58.318 47.826 0.00 0.00 0.00 4.26
4505 5623 4.870021 AACCTCAGATGCTCCCTATTTT 57.130 40.909 0.00 0.00 0.00 1.82
4512 5630 3.659686 AGATGCTCCCTATTTTGGGCTAT 59.340 43.478 0.00 0.00 46.67 2.97
4520 5638 5.906495 TCCCTATTTTGGGCTATACAGTGTA 59.094 40.000 5.24 5.24 46.67 2.90
4528 5646 1.925068 GCTATACAGTGTACTCCGCGC 60.925 57.143 4.80 0.00 0.00 6.86
4530 5648 0.744874 ATACAGTGTACTCCGCGCAT 59.255 50.000 8.75 0.00 0.00 4.73
4581 5699 3.934457 TCCGAAAGAAAATTCCTTGGC 57.066 42.857 0.00 0.00 0.00 4.52
4599 5717 3.433343 TGGCTGATCAACAACATTCCAT 58.567 40.909 0.00 0.00 0.00 3.41
4613 5731 3.196254 ACATTCCATTGATCCTTGGTTGC 59.804 43.478 10.02 0.00 34.48 4.17
4615 5733 1.076841 TCCATTGATCCTTGGTTGCCA 59.923 47.619 10.02 0.00 34.48 4.92
4630 5748 3.414272 CCACTGGCATTAGCTCGC 58.586 61.111 0.00 0.00 41.70 5.03
4663 5781 4.603989 TTTCTTCAGCATTGGCATGAAA 57.396 36.364 0.00 0.00 44.61 2.69
4684 5802 7.950512 TGAAAAGTTGGATCTGCTTTGAATAA 58.049 30.769 9.29 0.00 33.36 1.40
4711 5829 6.598503 TCTCAGATTTGGACATTGATATGCT 58.401 36.000 0.00 0.00 35.03 3.79
4731 5849 3.667960 GCTCTGCATTTTTAGTGTCGGTG 60.668 47.826 0.00 0.00 0.00 4.94
4736 5854 2.279935 TTTTTAGTGTCGGTGCCCAT 57.720 45.000 0.00 0.00 0.00 4.00
4750 5868 5.529430 TCGGTGCCCATAATTGTGTTTATAG 59.471 40.000 1.26 0.00 0.00 1.31
4764 5882 5.941058 TGTGTTTATAGGTGGTGGTACATTG 59.059 40.000 0.00 0.00 44.52 2.82
4775 5893 4.638421 TGGTGGTACATTGTAGCTTTATGC 59.362 41.667 22.55 9.02 44.52 3.14
4777 5895 5.220854 GGTGGTACATTGTAGCTTTATGCAG 60.221 44.000 22.55 0.00 44.52 4.41
4781 5899 5.567138 ACATTGTAGCTTTATGCAGGTTC 57.433 39.130 0.00 0.00 45.94 3.62
4791 5909 1.720781 ATGCAGGTTCTTTGGCCTTT 58.279 45.000 3.32 0.00 31.73 3.11
4792 5910 0.752054 TGCAGGTTCTTTGGCCTTTG 59.248 50.000 3.32 0.00 31.73 2.77
4794 5912 0.681175 CAGGTTCTTTGGCCTTTGGG 59.319 55.000 3.32 0.00 31.73 4.12
4797 5915 1.344438 GGTTCTTTGGCCTTTGGGAAG 59.656 52.381 3.32 0.00 33.58 3.46
4798 5916 2.316108 GTTCTTTGGCCTTTGGGAAGA 58.684 47.619 3.32 1.41 34.71 2.87
4802 5920 0.856982 TTGGCCTTTGGGAAGAAGGA 59.143 50.000 3.32 0.00 45.25 3.36
4807 5925 2.819348 GCCTTTGGGAAGAAGGATGTGT 60.819 50.000 7.06 0.00 45.25 3.72
4808 5926 3.500343 CCTTTGGGAAGAAGGATGTGTT 58.500 45.455 0.00 0.00 45.25 3.32
4839 5957 2.494870 GGCAGATCATGGAAGCTTGTTT 59.505 45.455 2.10 0.00 0.00 2.83
4862 5980 7.715265 TTTTTGTAGCTTGACAAGAGACTAG 57.285 36.000 19.51 0.00 40.31 2.57
4863 5981 6.650427 TTTGTAGCTTGACAAGAGACTAGA 57.350 37.500 19.51 6.71 40.31 2.43
4864 5982 5.888691 TGTAGCTTGACAAGAGACTAGAG 57.111 43.478 19.51 0.00 0.00 2.43
4865 5983 5.317808 TGTAGCTTGACAAGAGACTAGAGT 58.682 41.667 19.51 0.00 0.00 3.24
4866 5984 5.413213 TGTAGCTTGACAAGAGACTAGAGTC 59.587 44.000 19.51 1.17 45.08 3.36
4867 5985 8.176669 TTGTAGCTTGACAAGAGACTAGAGTCT 61.177 40.741 19.51 12.01 44.54 3.24
4879 5997 4.987832 GACTAGAGTCTTCGCATTTCTGA 58.012 43.478 0.00 0.00 41.65 3.27
4880 5998 5.587289 GACTAGAGTCTTCGCATTTCTGAT 58.413 41.667 0.00 0.00 41.65 2.90
4881 5999 5.347342 ACTAGAGTCTTCGCATTTCTGATG 58.653 41.667 0.00 0.00 0.00 3.07
4882 6000 2.935201 AGAGTCTTCGCATTTCTGATGC 59.065 45.455 1.04 1.04 41.35 3.91
4883 6001 2.012673 AGTCTTCGCATTTCTGATGCC 58.987 47.619 5.51 0.00 41.71 4.40
4884 6002 1.739466 GTCTTCGCATTTCTGATGCCA 59.261 47.619 5.51 0.00 41.71 4.92
4885 6003 2.357009 GTCTTCGCATTTCTGATGCCAT 59.643 45.455 5.51 0.00 41.71 4.40
4886 6004 2.356695 TCTTCGCATTTCTGATGCCATG 59.643 45.455 5.51 0.00 41.71 3.66
4887 6005 2.041251 TCGCATTTCTGATGCCATGA 57.959 45.000 5.51 0.00 41.71 3.07
4888 6006 2.367486 TCGCATTTCTGATGCCATGAA 58.633 42.857 5.51 0.00 41.71 2.57
4889 6007 2.097954 TCGCATTTCTGATGCCATGAAC 59.902 45.455 5.51 0.00 41.71 3.18
4890 6008 2.797087 CGCATTTCTGATGCCATGAACC 60.797 50.000 5.51 0.00 41.71 3.62
4891 6009 2.429610 GCATTTCTGATGCCATGAACCT 59.570 45.455 0.00 0.00 39.01 3.50
4892 6010 3.633525 GCATTTCTGATGCCATGAACCTA 59.366 43.478 0.00 0.00 39.01 3.08
4893 6011 4.280174 GCATTTCTGATGCCATGAACCTAT 59.720 41.667 0.00 0.00 39.01 2.57
4894 6012 5.221382 GCATTTCTGATGCCATGAACCTATT 60.221 40.000 0.00 0.00 39.01 1.73
4895 6013 6.684613 GCATTTCTGATGCCATGAACCTATTT 60.685 38.462 0.00 0.00 39.01 1.40
4896 6014 6.855763 TTTCTGATGCCATGAACCTATTTT 57.144 33.333 0.00 0.00 0.00 1.82
4897 6015 7.953005 TTTCTGATGCCATGAACCTATTTTA 57.047 32.000 0.00 0.00 0.00 1.52
4898 6016 8.537728 TTTCTGATGCCATGAACCTATTTTAT 57.462 30.769 0.00 0.00 0.00 1.40
4899 6017 7.750229 TCTGATGCCATGAACCTATTTTATC 57.250 36.000 0.00 0.00 0.00 1.75
4900 6018 6.716628 TCTGATGCCATGAACCTATTTTATCC 59.283 38.462 0.00 0.00 0.00 2.59
4901 6019 6.613699 TGATGCCATGAACCTATTTTATCCT 58.386 36.000 0.00 0.00 0.00 3.24
4902 6020 6.716628 TGATGCCATGAACCTATTTTATCCTC 59.283 38.462 0.00 0.00 0.00 3.71
4903 6021 6.012337 TGCCATGAACCTATTTTATCCTCA 57.988 37.500 0.00 0.00 0.00 3.86
4904 6022 6.613699 TGCCATGAACCTATTTTATCCTCAT 58.386 36.000 0.00 0.00 0.00 2.90
4905 6023 6.491062 TGCCATGAACCTATTTTATCCTCATG 59.509 38.462 0.00 0.00 38.80 3.07
4909 6027 9.003658 CATGAACCTATTTTATCCTCATGGTAC 57.996 37.037 0.00 0.00 36.59 3.34
4910 6028 8.331931 TGAACCTATTTTATCCTCATGGTACT 57.668 34.615 0.00 0.00 34.23 2.73
4911 6029 8.429641 TGAACCTATTTTATCCTCATGGTACTC 58.570 37.037 0.00 0.00 34.23 2.59
4912 6030 7.931015 ACCTATTTTATCCTCATGGTACTCA 57.069 36.000 0.00 0.00 34.23 3.41
4913 6031 8.331931 ACCTATTTTATCCTCATGGTACTCAA 57.668 34.615 0.00 0.00 34.23 3.02
4914 6032 8.949421 ACCTATTTTATCCTCATGGTACTCAAT 58.051 33.333 0.00 0.00 34.23 2.57
4915 6033 9.799106 CCTATTTTATCCTCATGGTACTCAATT 57.201 33.333 0.00 0.00 34.23 2.32
4952 6070 8.846943 TCTTTGTATTTAATCTTGAGCTGTGA 57.153 30.769 0.00 0.00 0.00 3.58
4953 6071 9.453572 TCTTTGTATTTAATCTTGAGCTGTGAT 57.546 29.630 0.00 0.00 0.00 3.06
4954 6072 9.713740 CTTTGTATTTAATCTTGAGCTGTGATC 57.286 33.333 0.00 0.00 0.00 2.92
4955 6073 7.468922 TGTATTTAATCTTGAGCTGTGATCG 57.531 36.000 0.00 0.00 0.00 3.69
4956 6074 7.264947 TGTATTTAATCTTGAGCTGTGATCGA 58.735 34.615 0.00 0.00 0.00 3.59
4957 6075 6.841443 ATTTAATCTTGAGCTGTGATCGAG 57.159 37.500 0.00 0.00 0.00 4.04
4958 6076 3.883830 AATCTTGAGCTGTGATCGAGT 57.116 42.857 0.00 0.00 31.22 4.18
4959 6077 2.643933 TCTTGAGCTGTGATCGAGTG 57.356 50.000 0.00 0.00 31.22 3.51
4960 6078 1.203287 TCTTGAGCTGTGATCGAGTGG 59.797 52.381 0.00 0.00 31.22 4.00
4961 6079 1.203287 CTTGAGCTGTGATCGAGTGGA 59.797 52.381 0.00 0.00 0.00 4.02
4962 6080 0.528017 TGAGCTGTGATCGAGTGGAC 59.472 55.000 0.00 0.00 0.00 4.02
4963 6081 0.814457 GAGCTGTGATCGAGTGGACT 59.186 55.000 0.00 0.00 0.00 3.85
4964 6082 0.529833 AGCTGTGATCGAGTGGACTG 59.470 55.000 0.00 0.00 0.00 3.51
4965 6083 1.080995 GCTGTGATCGAGTGGACTGC 61.081 60.000 0.00 0.00 0.00 4.40
4966 6084 0.244721 CTGTGATCGAGTGGACTGCA 59.755 55.000 0.00 0.00 0.00 4.41
4967 6085 0.244721 TGTGATCGAGTGGACTGCAG 59.755 55.000 13.48 13.48 0.00 4.41
4968 6086 0.244994 GTGATCGAGTGGACTGCAGT 59.755 55.000 21.88 21.88 0.00 4.40
4969 6087 0.969149 TGATCGAGTGGACTGCAGTT 59.031 50.000 22.65 4.27 0.00 3.16
4970 6088 1.344438 TGATCGAGTGGACTGCAGTTT 59.656 47.619 22.65 7.32 0.00 2.66
4971 6089 2.224281 TGATCGAGTGGACTGCAGTTTT 60.224 45.455 22.65 6.93 0.00 2.43
4972 6090 3.006430 TGATCGAGTGGACTGCAGTTTTA 59.994 43.478 22.65 7.69 0.00 1.52
4973 6091 3.026630 TCGAGTGGACTGCAGTTTTAG 57.973 47.619 22.65 10.80 0.00 1.85
4974 6092 2.069273 CGAGTGGACTGCAGTTTTAGG 58.931 52.381 22.65 5.62 0.00 2.69
4975 6093 2.427506 GAGTGGACTGCAGTTTTAGGG 58.572 52.381 22.65 0.00 0.00 3.53
4976 6094 0.881796 GTGGACTGCAGTTTTAGGGC 59.118 55.000 22.65 5.82 0.00 5.19
4977 6095 0.771127 TGGACTGCAGTTTTAGGGCT 59.229 50.000 22.65 0.00 0.00 5.19
4978 6096 1.168714 GGACTGCAGTTTTAGGGCTG 58.831 55.000 22.65 0.00 35.93 4.85
4979 6097 1.271379 GGACTGCAGTTTTAGGGCTGA 60.271 52.381 22.65 0.00 34.87 4.26
4980 6098 2.619074 GGACTGCAGTTTTAGGGCTGAT 60.619 50.000 22.65 0.00 34.87 2.90
4981 6099 2.680339 GACTGCAGTTTTAGGGCTGATC 59.320 50.000 22.65 0.00 34.87 2.92
4982 6100 2.019984 CTGCAGTTTTAGGGCTGATCC 58.980 52.381 5.25 0.00 34.87 3.36
4983 6101 1.354031 TGCAGTTTTAGGGCTGATCCA 59.646 47.619 0.00 0.00 34.87 3.41
4984 6102 2.025037 TGCAGTTTTAGGGCTGATCCAT 60.025 45.455 0.00 0.00 34.87 3.41
4985 6103 3.026694 GCAGTTTTAGGGCTGATCCATT 58.973 45.455 0.00 0.00 34.87 3.16
4986 6104 3.448660 GCAGTTTTAGGGCTGATCCATTT 59.551 43.478 0.00 0.00 34.87 2.32
4987 6105 4.678840 GCAGTTTTAGGGCTGATCCATTTG 60.679 45.833 0.00 0.00 34.87 2.32
4988 6106 4.463891 CAGTTTTAGGGCTGATCCATTTGT 59.536 41.667 0.00 0.00 34.87 2.83
4989 6107 5.047092 CAGTTTTAGGGCTGATCCATTTGTT 60.047 40.000 0.00 0.00 34.87 2.83
4990 6108 5.543790 AGTTTTAGGGCTGATCCATTTGTTT 59.456 36.000 0.00 0.00 36.21 2.83
4991 6109 5.659440 TTTAGGGCTGATCCATTTGTTTC 57.341 39.130 0.00 0.00 36.21 2.78
4992 6110 3.463048 AGGGCTGATCCATTTGTTTCT 57.537 42.857 0.00 0.00 36.21 2.52
4993 6111 3.359950 AGGGCTGATCCATTTGTTTCTC 58.640 45.455 0.00 0.00 36.21 2.87
4994 6112 2.428530 GGGCTGATCCATTTGTTTCTCC 59.571 50.000 0.00 0.00 36.21 3.71
4995 6113 3.359950 GGCTGATCCATTTGTTTCTCCT 58.640 45.455 0.00 0.00 34.01 3.69
4996 6114 4.526970 GGCTGATCCATTTGTTTCTCCTA 58.473 43.478 0.00 0.00 34.01 2.94
4997 6115 5.136105 GGCTGATCCATTTGTTTCTCCTAT 58.864 41.667 0.00 0.00 34.01 2.57
4998 6116 5.595952 GGCTGATCCATTTGTTTCTCCTATT 59.404 40.000 0.00 0.00 34.01 1.73
4999 6117 6.097412 GGCTGATCCATTTGTTTCTCCTATTT 59.903 38.462 0.00 0.00 34.01 1.40
5000 6118 6.976925 GCTGATCCATTTGTTTCTCCTATTTG 59.023 38.462 0.00 0.00 0.00 2.32
5001 6119 7.148018 GCTGATCCATTTGTTTCTCCTATTTGA 60.148 37.037 0.00 0.00 0.00 2.69
5002 6120 8.284945 TGATCCATTTGTTTCTCCTATTTGAG 57.715 34.615 0.00 0.00 0.00 3.02
5003 6121 7.890127 TGATCCATTTGTTTCTCCTATTTGAGT 59.110 33.333 0.00 0.00 33.93 3.41
5004 6122 8.655935 ATCCATTTGTTTCTCCTATTTGAGTT 57.344 30.769 0.00 0.00 33.93 3.01
5005 6123 8.477419 TCCATTTGTTTCTCCTATTTGAGTTT 57.523 30.769 0.00 0.00 33.93 2.66
5098 6514 0.107165 GGGAGGATGCTGGTTGGTAC 60.107 60.000 0.00 0.00 0.00 3.34
5099 6515 0.912486 GGAGGATGCTGGTTGGTACT 59.088 55.000 0.00 0.00 0.00 2.73
5100 6516 1.134371 GGAGGATGCTGGTTGGTACTC 60.134 57.143 0.00 0.00 0.00 2.59
5101 6517 0.912486 AGGATGCTGGTTGGTACTCC 59.088 55.000 0.00 0.00 0.00 3.85
5102 6518 0.107165 GGATGCTGGTTGGTACTCCC 60.107 60.000 0.00 0.00 0.00 4.30
5103 6519 0.912486 GATGCTGGTTGGTACTCCCT 59.088 55.000 0.00 0.00 0.00 4.20
5104 6520 0.912486 ATGCTGGTTGGTACTCCCTC 59.088 55.000 0.00 0.00 0.00 4.30
5105 6521 1.198759 TGCTGGTTGGTACTCCCTCC 61.199 60.000 0.00 0.00 0.00 4.30
5106 6522 1.898154 CTGGTTGGTACTCCCTCCG 59.102 63.158 0.00 0.00 32.88 4.63
5107 6523 0.903454 CTGGTTGGTACTCCCTCCGT 60.903 60.000 0.00 0.00 32.88 4.69
5108 6524 0.901580 TGGTTGGTACTCCCTCCGTC 60.902 60.000 0.00 0.00 32.88 4.79
5109 6525 1.611474 GGTTGGTACTCCCTCCGTCC 61.611 65.000 0.00 0.00 0.00 4.79
5110 6526 1.679977 TTGGTACTCCCTCCGTCCG 60.680 63.158 0.00 0.00 0.00 4.79
5111 6527 2.832201 GGTACTCCCTCCGTCCGG 60.832 72.222 0.00 0.00 0.00 5.14
5112 6528 2.273449 GTACTCCCTCCGTCCGGA 59.727 66.667 0.00 0.00 42.90 5.14
5113 6529 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
5114 6530 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
5115 6531 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
5116 6532 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
5117 6533 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
5118 6534 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
5119 6535 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 9.573133 CTTCCATTGTATTTGTAAGAAATCCAC 57.427 33.333 0.00 0.00 0.00 4.02
31 32 8.748412 CCTTCCATTGTATTTGTAAGAAATCCA 58.252 33.333 0.00 0.00 0.00 3.41
38 41 8.110860 ACTTGACCTTCCATTGTATTTGTAAG 57.889 34.615 0.00 0.00 0.00 2.34
45 48 9.308000 TGAAATAAACTTGACCTTCCATTGTAT 57.692 29.630 0.00 0.00 0.00 2.29
130 134 2.226330 CAAGAACGTTTGGTCCATGGA 58.774 47.619 11.44 11.44 0.00 3.41
182 186 4.913335 TGTAGCGAGGTATGAACTAAGG 57.087 45.455 0.00 0.00 0.00 2.69
193 197 3.097614 AGGAAGTACATTGTAGCGAGGT 58.902 45.455 0.00 0.00 0.00 3.85
216 220 6.928979 TTTTCTGACAAGTATTTCCGAACA 57.071 33.333 0.00 0.00 0.00 3.18
219 223 6.712998 TCCATTTTTCTGACAAGTATTTCCGA 59.287 34.615 0.00 0.00 0.00 4.55
269 273 2.564062 AGCCTCCACCAACAAATTGATG 59.436 45.455 0.00 0.00 38.15 3.07
322 326 4.860866 TCATATCTCATCTCCTCTACCCCT 59.139 45.833 0.00 0.00 0.00 4.79
361 365 2.568623 ACATTCTCCTTCTTTGCCGT 57.431 45.000 0.00 0.00 0.00 5.68
430 435 2.497107 GCATATGTGTGCAACCATCC 57.503 50.000 4.29 0.00 44.43 3.51
443 448 4.309933 TCGACTATCTTTGCCTGCATATG 58.690 43.478 0.00 0.00 0.00 1.78
459 836 6.364165 CGAAGTGGTTACTCAATTTTCGACTA 59.636 38.462 0.00 0.00 35.69 2.59
484 861 1.933853 GAACCCACGCATCTACATGAC 59.066 52.381 0.00 0.00 30.57 3.06
485 862 1.470805 CGAACCCACGCATCTACATGA 60.471 52.381 0.00 0.00 30.57 3.07
489 866 1.402968 TCTACGAACCCACGCATCTAC 59.597 52.381 0.00 0.00 36.70 2.59
490 867 1.753930 TCTACGAACCCACGCATCTA 58.246 50.000 0.00 0.00 36.70 1.98
491 868 0.892755 TTCTACGAACCCACGCATCT 59.107 50.000 0.00 0.00 36.70 2.90
492 869 1.392510 GTTTCTACGAACCCACGCATC 59.607 52.381 0.00 0.00 36.70 3.91
515 892 1.067142 CGGGTAGAGTACTTTGCTGCA 60.067 52.381 0.00 0.00 0.00 4.41
516 893 1.641577 CGGGTAGAGTACTTTGCTGC 58.358 55.000 0.00 0.00 0.00 5.25
517 894 1.641577 GCGGGTAGAGTACTTTGCTG 58.358 55.000 0.00 0.00 0.00 4.41
518 895 0.172803 CGCGGGTAGAGTACTTTGCT 59.827 55.000 0.00 0.00 0.00 3.91
519 896 0.804933 CCGCGGGTAGAGTACTTTGC 60.805 60.000 20.10 0.00 0.00 3.68
520 897 0.529378 ACCGCGGGTAGAGTACTTTG 59.471 55.000 31.76 0.00 32.11 2.77
522 899 2.128771 TTACCGCGGGTAGAGTACTT 57.871 50.000 31.76 6.43 39.52 2.24
524 901 3.443099 AATTTACCGCGGGTAGAGTAC 57.557 47.619 31.76 0.00 39.52 2.73
526 903 4.320494 CGTATAATTTACCGCGGGTAGAGT 60.320 45.833 31.76 15.39 39.52 3.24
527 904 4.083324 TCGTATAATTTACCGCGGGTAGAG 60.083 45.833 31.76 9.71 39.52 2.43
528 905 3.818210 TCGTATAATTTACCGCGGGTAGA 59.182 43.478 31.76 14.60 39.52 2.59
529 906 4.159377 TCGTATAATTTACCGCGGGTAG 57.841 45.455 31.76 3.90 39.52 3.18
530 907 4.022416 ACATCGTATAATTTACCGCGGGTA 60.022 41.667 31.76 16.43 37.09 3.69
531 908 3.243839 ACATCGTATAATTTACCGCGGGT 60.244 43.478 31.76 17.55 40.16 5.28
532 909 3.319755 ACATCGTATAATTTACCGCGGG 58.680 45.455 31.76 11.88 0.00 6.13
570 947 5.353938 CATTCCATTTTGCTTCATGGTAGG 58.646 41.667 8.05 0.00 40.90 3.18
572 949 4.222366 TGCATTCCATTTTGCTTCATGGTA 59.778 37.500 8.05 0.94 40.90 3.25
575 952 5.811399 AATGCATTCCATTTTGCTTCATG 57.189 34.783 5.99 0.00 41.29 3.07
606 983 9.875708 TTTATTTATGAATGTAGTAGGGGCAAT 57.124 29.630 0.00 0.00 0.00 3.56
636 1013 5.496387 GCGAGAGAAAATGTATGATGTGTG 58.504 41.667 0.00 0.00 0.00 3.82
658 1037 2.185262 GGCTTAAAATTAGCTGCACGC 58.815 47.619 1.02 0.47 38.67 5.34
661 1040 4.981806 AATCGGCTTAAAATTAGCTGCA 57.018 36.364 1.02 0.00 43.24 4.41
677 1056 6.595716 GGGACATATGGAGAAATCTTAATCGG 59.404 42.308 7.80 0.00 0.00 4.18
692 1071 5.067153 TCAAAATTAGTTGCGGGACATATGG 59.933 40.000 7.80 0.00 0.00 2.74
693 1072 6.130298 TCAAAATTAGTTGCGGGACATATG 57.870 37.500 0.00 0.00 0.00 1.78
696 1075 3.119495 GCTCAAAATTAGTTGCGGGACAT 60.119 43.478 0.00 0.00 0.00 3.06
698 1077 2.415491 GGCTCAAAATTAGTTGCGGGAC 60.415 50.000 0.00 0.00 0.00 4.46
701 1080 1.466950 TCGGCTCAAAATTAGTTGCGG 59.533 47.619 0.00 0.00 0.00 5.69
727 1106 2.087646 GCTGCGAGAAAGAGGGAAAAT 58.912 47.619 0.00 0.00 0.00 1.82
787 1171 1.817099 GAGCTTGCAGATCCCCACG 60.817 63.158 0.00 0.00 0.00 4.94
829 1213 7.826260 TTTTTGTTTCCACATGAGTTCTTTC 57.174 32.000 0.00 0.00 31.06 2.62
869 1258 6.265422 CCCAAAAGAGGCTTTTTCTTCTTCTA 59.735 38.462 3.24 0.00 33.92 2.10
949 1397 1.932231 TAGTGAGGACCGGGGGAGA 60.932 63.158 6.32 0.00 0.00 3.71
956 1404 1.101331 GGGTACTGTAGTGAGGACCG 58.899 60.000 0.00 0.00 46.98 4.79
1046 2052 1.154150 GCTCACATGCAACGGAAGC 60.154 57.895 0.00 0.00 0.00 3.86
1742 2764 1.084289 GACCGACAAAGAAATCCCCG 58.916 55.000 0.00 0.00 0.00 5.73
1766 2788 5.104193 AGCTCAGATTATCCACCTGTTCATT 60.104 40.000 0.00 0.00 0.00 2.57
1767 2789 4.411540 AGCTCAGATTATCCACCTGTTCAT 59.588 41.667 0.00 0.00 0.00 2.57
1796 2831 1.228154 AAGAACCACCCAGAACGCC 60.228 57.895 0.00 0.00 0.00 5.68
1861 2901 3.402628 ACACCACCTACAATGTCAGAC 57.597 47.619 0.00 0.00 0.00 3.51
1940 2985 2.387757 AGCCATTAATGCCGGTGAAAT 58.612 42.857 10.11 0.00 0.00 2.17
1958 3003 9.745323 GCATTCACAAATTAGTTCAATTAAAGC 57.255 29.630 0.00 0.00 35.74 3.51
1993 3041 2.420722 GTCCCAACGTGACAAGTGAAAA 59.579 45.455 0.00 0.00 32.91 2.29
1997 3045 0.937304 CTGTCCCAACGTGACAAGTG 59.063 55.000 8.36 0.00 41.85 3.16
2006 3054 2.069273 GAATCTCACACTGTCCCAACG 58.931 52.381 0.00 0.00 0.00 4.10
2044 3092 8.946085 ACATTACTACACACAAAATATCCTGTG 58.054 33.333 13.10 13.10 46.76 3.66
2120 3168 4.150897 TCATCTATTTTGGAACGGAGGG 57.849 45.455 0.00 0.00 0.00 4.30
2121 3169 4.757149 GGATCATCTATTTTGGAACGGAGG 59.243 45.833 0.00 0.00 0.00 4.30
2122 3170 5.368145 TGGATCATCTATTTTGGAACGGAG 58.632 41.667 0.00 0.00 0.00 4.63
2123 3171 5.366482 TGGATCATCTATTTTGGAACGGA 57.634 39.130 0.00 0.00 0.00 4.69
2124 3172 5.590259 AGTTGGATCATCTATTTTGGAACGG 59.410 40.000 0.00 0.00 0.00 4.44
2125 3173 6.683974 AGTTGGATCATCTATTTTGGAACG 57.316 37.500 0.00 0.00 0.00 3.95
2126 3174 8.306761 ACAAAGTTGGATCATCTATTTTGGAAC 58.693 33.333 11.01 0.00 0.00 3.62
2127 3175 8.421249 ACAAAGTTGGATCATCTATTTTGGAA 57.579 30.769 11.01 0.00 0.00 3.53
2128 3176 8.956426 GTACAAAGTTGGATCATCTATTTTGGA 58.044 33.333 11.01 2.87 0.00 3.53
2129 3177 8.960591 AGTACAAAGTTGGATCATCTATTTTGG 58.039 33.333 11.01 0.00 0.00 3.28
2133 3181 9.614792 GGTTAGTACAAAGTTGGATCATCTATT 57.385 33.333 0.00 0.00 0.00 1.73
2134 3182 8.993424 AGGTTAGTACAAAGTTGGATCATCTAT 58.007 33.333 0.00 0.00 0.00 1.98
2135 3183 8.375493 AGGTTAGTACAAAGTTGGATCATCTA 57.625 34.615 0.00 0.00 0.00 1.98
2136 3184 7.259088 AGGTTAGTACAAAGTTGGATCATCT 57.741 36.000 0.00 0.00 0.00 2.90
2137 3185 7.923414 AAGGTTAGTACAAAGTTGGATCATC 57.077 36.000 0.00 0.00 0.00 2.92
2138 3186 8.603304 ACTAAGGTTAGTACAAAGTTGGATCAT 58.397 33.333 0.32 0.00 41.92 2.45
2139 3187 7.970102 ACTAAGGTTAGTACAAAGTTGGATCA 58.030 34.615 0.32 0.00 41.92 2.92
2152 3200 7.289782 TGACCCAACTTTGTACTAAGGTTAGTA 59.710 37.037 19.08 5.64 43.36 1.82
2153 3201 6.100134 TGACCCAACTTTGTACTAAGGTTAGT 59.900 38.462 19.08 12.61 45.39 2.24
2154 3202 6.527423 TGACCCAACTTTGTACTAAGGTTAG 58.473 40.000 19.08 9.91 36.82 2.34
2155 3203 6.497624 TGACCCAACTTTGTACTAAGGTTA 57.502 37.500 19.08 4.72 0.00 2.85
2156 3204 5.376756 TGACCCAACTTTGTACTAAGGTT 57.623 39.130 19.08 9.89 0.00 3.50
2157 3205 5.309806 AGATGACCCAACTTTGTACTAAGGT 59.690 40.000 19.08 11.48 0.00 3.50
2158 3206 5.805728 AGATGACCCAACTTTGTACTAAGG 58.194 41.667 19.08 6.74 0.00 2.69
2159 3207 9.449719 AAATAGATGACCCAACTTTGTACTAAG 57.550 33.333 14.42 14.42 0.00 2.18
2160 3208 9.802039 AAAATAGATGACCCAACTTTGTACTAA 57.198 29.630 0.00 0.00 0.00 2.24
2161 3209 9.226606 CAAAATAGATGACCCAACTTTGTACTA 57.773 33.333 0.00 0.00 0.00 1.82
2162 3210 7.176690 CCAAAATAGATGACCCAACTTTGTACT 59.823 37.037 0.00 0.00 0.00 2.73
2163 3211 7.175990 TCCAAAATAGATGACCCAACTTTGTAC 59.824 37.037 0.00 0.00 0.00 2.90
2164 3212 7.235079 TCCAAAATAGATGACCCAACTTTGTA 58.765 34.615 0.00 0.00 0.00 2.41
2165 3213 6.074648 TCCAAAATAGATGACCCAACTTTGT 58.925 36.000 0.00 0.00 0.00 2.83
2166 3214 6.588719 TCCAAAATAGATGACCCAACTTTG 57.411 37.500 0.00 0.00 0.00 2.77
2167 3215 6.294508 CGTTCCAAAATAGATGACCCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
2168 3216 5.183140 CGTTCCAAAATAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
2169 3217 4.700213 CGTTCCAAAATAGATGACCCAACT 59.300 41.667 0.00 0.00 0.00 3.16
2170 3218 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
2171 3219 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
2172 3220 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
2173 3221 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
2174 3222 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
2175 3223 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
2176 3224 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
2177 3225 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
2178 3226 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
2179 3227 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
2180 3228 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
2181 3229 4.098894 AGTACTCCCTCCGTTCCAAAATA 58.901 43.478 0.00 0.00 0.00 1.40
2182 3230 2.910977 AGTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
2183 3231 2.332117 AGTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
2184 3232 2.019807 AGTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
2185 3233 1.621814 CAAGTACTCCCTCCGTTCCAA 59.378 52.381 0.00 0.00 0.00 3.53
2186 3234 1.263356 CAAGTACTCCCTCCGTTCCA 58.737 55.000 0.00 0.00 0.00 3.53
2187 3235 1.204231 GACAAGTACTCCCTCCGTTCC 59.796 57.143 0.00 0.00 0.00 3.62
2188 3236 2.169330 AGACAAGTACTCCCTCCGTTC 58.831 52.381 0.00 0.00 0.00 3.95
2189 3237 2.305858 AGACAAGTACTCCCTCCGTT 57.694 50.000 0.00 0.00 0.00 4.44
2190 3238 2.305858 AAGACAAGTACTCCCTCCGT 57.694 50.000 0.00 0.00 0.00 4.69
2191 3239 2.688958 CCTAAGACAAGTACTCCCTCCG 59.311 54.545 0.00 0.00 0.00 4.63
2192 3240 3.978610 TCCTAAGACAAGTACTCCCTCC 58.021 50.000 0.00 0.00 0.00 4.30
2193 3241 5.624967 GCTTTCCTAAGACAAGTACTCCCTC 60.625 48.000 0.00 0.00 32.92 4.30
2194 3242 4.223255 GCTTTCCTAAGACAAGTACTCCCT 59.777 45.833 0.00 0.00 32.92 4.20
2195 3243 4.223255 AGCTTTCCTAAGACAAGTACTCCC 59.777 45.833 0.00 0.00 32.92 4.30
2196 3244 5.047235 TCAGCTTTCCTAAGACAAGTACTCC 60.047 44.000 0.00 0.00 32.92 3.85
2197 3245 5.865013 GTCAGCTTTCCTAAGACAAGTACTC 59.135 44.000 0.00 0.00 32.92 2.59
2198 3246 5.304614 TGTCAGCTTTCCTAAGACAAGTACT 59.695 40.000 0.00 0.00 36.39 2.73
2199 3247 5.405873 GTGTCAGCTTTCCTAAGACAAGTAC 59.594 44.000 2.69 0.00 40.47 2.73
2200 3248 5.304614 AGTGTCAGCTTTCCTAAGACAAGTA 59.695 40.000 2.69 0.00 40.47 2.24
2201 3249 4.101741 AGTGTCAGCTTTCCTAAGACAAGT 59.898 41.667 2.69 0.00 40.47 3.16
2202 3250 4.450419 CAGTGTCAGCTTTCCTAAGACAAG 59.550 45.833 2.69 0.00 40.47 3.16
2203 3251 4.380531 CAGTGTCAGCTTTCCTAAGACAA 58.619 43.478 2.69 0.00 40.47 3.18
2357 3451 8.197439 CACAGACACCTGATAATACTATTCACA 58.803 37.037 0.00 0.00 43.02 3.58
2358 3452 8.198109 ACACAGACACCTGATAATACTATTCAC 58.802 37.037 0.00 0.00 43.02 3.18
2367 3461 6.663953 ACTACACTACACAGACACCTGATAAT 59.336 38.462 0.00 0.00 43.02 1.28
2368 3462 6.008331 ACTACACTACACAGACACCTGATAA 58.992 40.000 0.00 0.00 43.02 1.75
2396 3490 0.400213 CAGGACACTAACCAGGCCAA 59.600 55.000 5.01 0.00 0.00 4.52
2400 3494 1.299976 GGGCAGGACACTAACCAGG 59.700 63.158 0.00 0.00 0.00 4.45
2411 3505 1.702401 TGAACATAACACTGGGCAGGA 59.298 47.619 0.00 0.00 0.00 3.86
2418 3513 6.173339 ACTAATGGGACTGAACATAACACTG 58.827 40.000 0.00 0.00 0.00 3.66
2498 3593 6.818644 ACACATTCGTAAATCTACAAGAGCAT 59.181 34.615 0.00 0.00 0.00 3.79
2507 3602 5.921976 ACGACACAACACATTCGTAAATCTA 59.078 36.000 0.00 0.00 42.66 1.98
2511 3606 3.864003 TGACGACACAACACATTCGTAAA 59.136 39.130 0.00 0.00 44.40 2.01
2518 3613 3.629855 TCCATTTTGACGACACAACACAT 59.370 39.130 0.00 0.00 0.00 3.21
2522 3617 2.979813 GCATCCATTTTGACGACACAAC 59.020 45.455 0.00 0.00 0.00 3.32
2565 3660 5.326200 ACGGGATTGAGTTACTAACAGAG 57.674 43.478 1.79 0.00 0.00 3.35
2577 3672 3.205338 TGAATGCATGTACGGGATTGAG 58.795 45.455 0.00 0.00 0.00 3.02
2578 3673 3.274095 TGAATGCATGTACGGGATTGA 57.726 42.857 0.00 0.00 0.00 2.57
2585 3680 2.916716 GGCAAAGTTGAATGCATGTACG 59.083 45.455 0.00 0.00 44.32 3.67
2645 3741 6.544038 TTCATATAATTGATCGCAGTGGTG 57.456 37.500 0.00 0.00 0.00 4.17
2913 4013 4.535294 AGGCTGATCCATAGATTACATGCT 59.465 41.667 0.00 0.00 37.29 3.79
2926 4026 8.650143 ATTAAAAAGAAACTAAGGCTGATCCA 57.350 30.769 0.00 0.00 37.29 3.41
3022 4122 3.623060 CCTACAGCATCTACGCACATTTT 59.377 43.478 0.00 0.00 0.00 1.82
3070 4170 0.451783 ATCGAATTGCGCCCTGTTTC 59.548 50.000 4.18 0.00 40.61 2.78
3185 4285 9.154847 CACTGAATATTCTAATGACACAGTTCA 57.845 33.333 16.24 0.00 34.57 3.18
3205 4305 7.800155 TCAACAACATAGACAAATCACTGAA 57.200 32.000 0.00 0.00 0.00 3.02
3437 4537 1.302033 CAGCAACTGGAGGCTTCGT 60.302 57.895 0.00 0.00 38.56 3.85
3700 4800 2.125512 GGCTTCCTGTGCGATCGT 60.126 61.111 17.81 0.00 0.00 3.73
3748 4848 4.459089 GGTGGACGAGGAGCAGGC 62.459 72.222 0.00 0.00 0.00 4.85
3911 5011 2.039624 GTGGCTGGAGGAGGAGGA 59.960 66.667 0.00 0.00 0.00 3.71
3912 5012 2.040278 AGTGGCTGGAGGAGGAGG 59.960 66.667 0.00 0.00 0.00 4.30
3913 5013 3.307445 CAGTGGCTGGAGGAGGAG 58.693 66.667 0.00 0.00 0.00 3.69
4040 5143 3.252215 AGAACGCTTCCAGATCTCTATCG 59.748 47.826 0.00 0.00 37.19 2.92
4071 5174 3.503363 TGTCCAGCAACAGCTATTGAAAG 59.497 43.478 9.40 0.00 36.70 2.62
4076 5179 2.566833 TGTGTCCAGCAACAGCTATT 57.433 45.000 0.00 0.00 36.70 1.73
4124 5227 0.461548 CCGCTGAGGACTGCTATTCA 59.538 55.000 0.00 0.00 45.00 2.57
4127 5230 2.801631 GCCCGCTGAGGACTGCTAT 61.802 63.158 0.00 0.00 45.00 2.97
4243 5347 1.457831 ATACAGGGACGGAGAGGGC 60.458 63.158 0.00 0.00 0.00 5.19
4264 5368 2.762535 ACCTACAGTGCCACACATAC 57.237 50.000 0.00 0.00 36.74 2.39
4280 5384 1.681264 CCGGCAACAAGAAGAAAACCT 59.319 47.619 0.00 0.00 0.00 3.50
4290 5395 1.898574 ACAAGAGGCCGGCAACAAG 60.899 57.895 30.85 17.05 0.00 3.16
4306 5411 1.790043 CAGACAACGTATGTTCGCACA 59.210 47.619 0.00 0.00 44.12 4.57
4307 5412 2.055838 TCAGACAACGTATGTTCGCAC 58.944 47.619 0.00 0.00 44.12 5.34
4311 5416 4.056050 ACCTGTTCAGACAACGTATGTTC 58.944 43.478 0.00 0.00 44.12 3.18
4316 5421 2.033372 TCCACCTGTTCAGACAACGTA 58.967 47.619 1.00 0.00 34.85 3.57
4319 5424 2.910688 TCTCCACCTGTTCAGACAAC 57.089 50.000 1.00 0.00 34.85 3.32
4324 5429 1.277273 TCAGCATCTCCACCTGTTCAG 59.723 52.381 0.00 0.00 0.00 3.02
4328 5433 1.554160 CTCTTCAGCATCTCCACCTGT 59.446 52.381 0.00 0.00 0.00 4.00
4330 5435 2.244486 TCTCTTCAGCATCTCCACCT 57.756 50.000 0.00 0.00 0.00 4.00
4337 5442 5.417811 TCATGTCTTCTTCTCTTCAGCATC 58.582 41.667 0.00 0.00 0.00 3.91
4342 5447 7.060383 ACTTCTTCATGTCTTCTTCTCTTCA 57.940 36.000 0.00 0.00 0.00 3.02
4363 5468 4.928615 CAGCTTCATCTTTCTTCTCGACTT 59.071 41.667 0.00 0.00 0.00 3.01
4364 5469 4.219507 TCAGCTTCATCTTTCTTCTCGACT 59.780 41.667 0.00 0.00 0.00 4.18
4366 5471 4.790765 TCAGCTTCATCTTTCTTCTCGA 57.209 40.909 0.00 0.00 0.00 4.04
4367 5472 4.687948 TGTTCAGCTTCATCTTTCTTCTCG 59.312 41.667 0.00 0.00 0.00 4.04
4368 5473 6.551385 TTGTTCAGCTTCATCTTTCTTCTC 57.449 37.500 0.00 0.00 0.00 2.87
4369 5474 6.016443 CCTTTGTTCAGCTTCATCTTTCTTCT 60.016 38.462 0.00 0.00 0.00 2.85
4370 5475 6.148264 CCTTTGTTCAGCTTCATCTTTCTTC 58.852 40.000 0.00 0.00 0.00 2.87
4371 5476 5.010415 CCCTTTGTTCAGCTTCATCTTTCTT 59.990 40.000 0.00 0.00 0.00 2.52
4372 5477 4.522022 CCCTTTGTTCAGCTTCATCTTTCT 59.478 41.667 0.00 0.00 0.00 2.52
4373 5478 4.802999 CCCTTTGTTCAGCTTCATCTTTC 58.197 43.478 0.00 0.00 0.00 2.62
4374 5479 3.006217 GCCCTTTGTTCAGCTTCATCTTT 59.994 43.478 0.00 0.00 0.00 2.52
4389 5498 1.631405 TGACAATCCTTGGCCCTTTG 58.369 50.000 0.00 0.00 38.13 2.77
4390 5499 2.250924 CTTGACAATCCTTGGCCCTTT 58.749 47.619 0.00 0.00 38.13 3.11
4397 5506 4.097741 TGTGAAACCACTTGACAATCCTTG 59.902 41.667 0.00 0.00 35.63 3.61
4403 5512 1.748493 GCCTGTGAAACCACTTGACAA 59.252 47.619 0.00 0.00 35.63 3.18
4410 5521 2.564721 GCCAGGCCTGTGAAACCAC 61.565 63.158 30.63 6.29 34.36 4.16
4423 5534 1.821136 GAAAATCCAGTTCCAGCCAGG 59.179 52.381 0.00 0.00 39.47 4.45
4437 5548 6.040878 CCAATGAGCCTGAAGAATGAAAATC 58.959 40.000 0.00 0.00 0.00 2.17
4445 5556 2.108075 TGGAACCAATGAGCCTGAAGAA 59.892 45.455 0.00 0.00 0.00 2.52
4446 5557 1.704628 TGGAACCAATGAGCCTGAAGA 59.295 47.619 0.00 0.00 0.00 2.87
4447 5558 2.205022 TGGAACCAATGAGCCTGAAG 57.795 50.000 0.00 0.00 0.00 3.02
4470 5581 3.646162 TCTGAGGTTTCTGTAGAGCCAAA 59.354 43.478 7.13 0.00 0.00 3.28
4471 5582 3.239449 TCTGAGGTTTCTGTAGAGCCAA 58.761 45.455 7.13 0.00 0.00 4.52
4472 5583 2.889512 TCTGAGGTTTCTGTAGAGCCA 58.110 47.619 7.13 0.00 0.00 4.75
4505 5623 2.304092 CGGAGTACACTGTATAGCCCA 58.696 52.381 0.00 0.00 0.00 5.36
4508 5626 1.925068 GCGCGGAGTACACTGTATAGC 60.925 57.143 8.83 0.00 0.00 2.97
4512 5630 0.179148 CATGCGCGGAGTACACTGTA 60.179 55.000 8.83 0.00 0.00 2.74
4520 5638 2.270297 GAAAATGCCATGCGCGGAGT 62.270 55.000 8.83 0.00 42.08 3.85
4528 5646 2.572191 ATGCACGAGAAAATGCCATG 57.428 45.000 0.00 0.00 41.33 3.66
4530 5648 2.223548 GCATATGCACGAGAAAATGCCA 60.224 45.455 22.84 0.00 41.33 4.92
4557 5675 5.120674 GCCAAGGAATTTTCTTTCGGAAATG 59.879 40.000 3.24 0.00 42.63 2.32
4564 5682 6.029346 TGATCAGCCAAGGAATTTTCTTTC 57.971 37.500 0.00 0.00 0.00 2.62
4599 5717 1.619654 CAGTGGCAACCAAGGATCAA 58.380 50.000 0.00 0.00 34.18 2.57
4613 5731 0.104855 TAGCGAGCTAATGCCAGTGG 59.895 55.000 4.20 4.20 40.80 4.00
4615 5733 1.757118 TCTTAGCGAGCTAATGCCAGT 59.243 47.619 16.68 0.00 37.81 4.00
4630 5748 4.428209 TGCTGAAGAAATCGAGCTCTTAG 58.572 43.478 12.85 9.84 34.94 2.18
4639 5757 2.925578 TGCCAATGCTGAAGAAATCG 57.074 45.000 0.00 0.00 38.71 3.34
4663 5781 8.810041 AGAAATTATTCAAAGCAGATCCAACTT 58.190 29.630 0.00 0.00 38.06 2.66
4684 5802 8.358148 GCATATCAATGTCCAAATCTGAGAAAT 58.642 33.333 0.00 0.00 35.38 2.17
4711 5829 2.225491 GCACCGACACTAAAAATGCAGA 59.775 45.455 0.00 0.00 0.00 4.26
4731 5849 5.596772 ACCACCTATAAACACAATTATGGGC 59.403 40.000 8.75 0.00 43.82 5.36
4736 5854 7.687388 TGTACCACCACCTATAAACACAATTA 58.313 34.615 0.00 0.00 0.00 1.40
4750 5868 2.781681 AGCTACAATGTACCACCACC 57.218 50.000 0.00 0.00 0.00 4.61
4764 5882 4.675408 GCCAAAGAACCTGCATAAAGCTAC 60.675 45.833 0.00 0.00 45.94 3.58
4775 5893 0.681175 CCCAAAGGCCAAAGAACCTG 59.319 55.000 5.01 0.00 36.07 4.00
4777 5895 1.344438 CTTCCCAAAGGCCAAAGAACC 59.656 52.381 5.01 0.00 0.00 3.62
4781 5899 1.620323 CCTTCTTCCCAAAGGCCAAAG 59.380 52.381 5.01 0.00 37.10 2.77
4791 5909 5.534654 CAGTTTAAACACATCCTTCTTCCCA 59.465 40.000 20.06 0.00 0.00 4.37
4792 5910 5.535030 ACAGTTTAAACACATCCTTCTTCCC 59.465 40.000 20.06 0.00 0.00 3.97
4794 5912 6.363473 CGACAGTTTAAACACATCCTTCTTC 58.637 40.000 20.06 1.29 0.00 2.87
4797 5915 4.612939 GCCGACAGTTTAAACACATCCTTC 60.613 45.833 20.06 4.87 0.00 3.46
4798 5916 3.252458 GCCGACAGTTTAAACACATCCTT 59.748 43.478 20.06 0.00 0.00 3.36
4802 5920 3.472652 TCTGCCGACAGTTTAAACACAT 58.527 40.909 20.06 5.02 44.77 3.21
4807 5925 3.689161 CCATGATCTGCCGACAGTTTAAA 59.311 43.478 0.00 0.00 44.77 1.52
4808 5926 3.055458 TCCATGATCTGCCGACAGTTTAA 60.055 43.478 0.00 0.00 44.77 1.52
4839 5957 7.050970 TCTAGTCTCTTGTCAAGCTACAAAA 57.949 36.000 7.78 0.00 38.81 2.44
4856 5974 9.957407 GCATCAGAAATGCGAAGACTCTAGTCT 62.957 44.444 6.82 6.82 44.80 3.24
4857 5975 4.987832 TCAGAAATGCGAAGACTCTAGTC 58.012 43.478 1.72 1.72 45.08 2.59
4858 5976 5.347342 CATCAGAAATGCGAAGACTCTAGT 58.653 41.667 0.00 0.00 0.00 2.57
4859 5977 4.208873 GCATCAGAAATGCGAAGACTCTAG 59.791 45.833 0.00 0.00 35.17 2.43
4860 5978 4.115516 GCATCAGAAATGCGAAGACTCTA 58.884 43.478 0.00 0.00 35.17 2.43
4861 5979 2.935201 GCATCAGAAATGCGAAGACTCT 59.065 45.455 0.00 0.00 35.17 3.24
4862 5980 2.031437 GGCATCAGAAATGCGAAGACTC 59.969 50.000 4.11 0.00 45.41 3.36
4863 5981 2.012673 GGCATCAGAAATGCGAAGACT 58.987 47.619 4.11 0.00 45.41 3.24
4864 5982 1.739466 TGGCATCAGAAATGCGAAGAC 59.261 47.619 4.11 0.00 45.41 3.01
4865 5983 2.112380 TGGCATCAGAAATGCGAAGA 57.888 45.000 4.11 0.00 45.41 2.87
4866 5984 2.356695 TCATGGCATCAGAAATGCGAAG 59.643 45.455 0.00 0.00 45.41 3.79
4867 5985 2.367486 TCATGGCATCAGAAATGCGAA 58.633 42.857 0.00 0.00 45.41 4.70
4868 5986 2.041251 TCATGGCATCAGAAATGCGA 57.959 45.000 0.00 0.79 45.41 5.10
4869 5987 2.456989 GTTCATGGCATCAGAAATGCG 58.543 47.619 0.00 0.00 45.41 4.73
4870 5988 2.429610 AGGTTCATGGCATCAGAAATGC 59.570 45.455 0.00 1.40 43.85 3.56
4871 5989 6.401047 AATAGGTTCATGGCATCAGAAATG 57.599 37.500 0.00 0.00 0.00 2.32
4872 5990 7.427989 AAAATAGGTTCATGGCATCAGAAAT 57.572 32.000 0.00 0.00 0.00 2.17
4873 5991 6.855763 AAAATAGGTTCATGGCATCAGAAA 57.144 33.333 0.00 0.00 0.00 2.52
4874 5992 7.231317 GGATAAAATAGGTTCATGGCATCAGAA 59.769 37.037 0.00 0.00 0.00 3.02
4875 5993 6.716628 GGATAAAATAGGTTCATGGCATCAGA 59.283 38.462 0.00 0.00 0.00 3.27
4876 5994 6.718454 AGGATAAAATAGGTTCATGGCATCAG 59.282 38.462 0.00 0.00 0.00 2.90
4877 5995 6.613699 AGGATAAAATAGGTTCATGGCATCA 58.386 36.000 0.00 0.00 0.00 3.07
4878 5996 6.716628 TGAGGATAAAATAGGTTCATGGCATC 59.283 38.462 0.00 0.00 0.00 3.91
4879 5997 6.613699 TGAGGATAAAATAGGTTCATGGCAT 58.386 36.000 0.00 0.00 0.00 4.40
4880 5998 6.012337 TGAGGATAAAATAGGTTCATGGCA 57.988 37.500 0.00 0.00 0.00 4.92
4881 5999 6.071728 CCATGAGGATAAAATAGGTTCATGGC 60.072 42.308 15.22 0.00 36.89 4.40
4882 6000 7.006509 ACCATGAGGATAAAATAGGTTCATGG 58.993 38.462 22.32 22.32 38.69 3.66
4883 6001 9.003658 GTACCATGAGGATAAAATAGGTTCATG 57.996 37.037 0.00 4.94 38.69 3.07
4884 6002 8.949421 AGTACCATGAGGATAAAATAGGTTCAT 58.051 33.333 0.00 0.00 38.69 2.57
4885 6003 8.331931 AGTACCATGAGGATAAAATAGGTTCA 57.668 34.615 0.00 0.00 38.69 3.18
4886 6004 8.429641 TGAGTACCATGAGGATAAAATAGGTTC 58.570 37.037 0.00 0.00 38.69 3.62
4887 6005 8.331931 TGAGTACCATGAGGATAAAATAGGTT 57.668 34.615 0.00 0.00 38.69 3.50
4888 6006 7.931015 TGAGTACCATGAGGATAAAATAGGT 57.069 36.000 0.00 0.00 38.69 3.08
4889 6007 9.799106 AATTGAGTACCATGAGGATAAAATAGG 57.201 33.333 0.00 0.00 38.69 2.57
4926 6044 9.453572 TCACAGCTCAAGATTAAATACAAAGAT 57.546 29.630 0.00 0.00 0.00 2.40
4927 6045 8.846943 TCACAGCTCAAGATTAAATACAAAGA 57.153 30.769 0.00 0.00 0.00 2.52
4928 6046 9.713740 GATCACAGCTCAAGATTAAATACAAAG 57.286 33.333 0.00 0.00 0.00 2.77
4929 6047 8.390354 CGATCACAGCTCAAGATTAAATACAAA 58.610 33.333 0.00 0.00 0.00 2.83
4930 6048 7.763985 TCGATCACAGCTCAAGATTAAATACAA 59.236 33.333 0.00 0.00 0.00 2.41
4931 6049 7.264947 TCGATCACAGCTCAAGATTAAATACA 58.735 34.615 0.00 0.00 0.00 2.29
4932 6050 7.436673 ACTCGATCACAGCTCAAGATTAAATAC 59.563 37.037 0.00 0.00 0.00 1.89
4933 6051 7.436376 CACTCGATCACAGCTCAAGATTAAATA 59.564 37.037 0.00 0.00 0.00 1.40
4934 6052 6.257411 CACTCGATCACAGCTCAAGATTAAAT 59.743 38.462 0.00 0.00 0.00 1.40
4935 6053 5.578336 CACTCGATCACAGCTCAAGATTAAA 59.422 40.000 0.00 0.00 0.00 1.52
4936 6054 5.105063 CACTCGATCACAGCTCAAGATTAA 58.895 41.667 0.00 0.00 0.00 1.40
4937 6055 4.440663 CCACTCGATCACAGCTCAAGATTA 60.441 45.833 0.00 0.00 0.00 1.75
4938 6056 3.519579 CACTCGATCACAGCTCAAGATT 58.480 45.455 0.00 0.00 0.00 2.40
4939 6057 2.159128 CCACTCGATCACAGCTCAAGAT 60.159 50.000 0.00 0.00 0.00 2.40
4940 6058 1.203287 CCACTCGATCACAGCTCAAGA 59.797 52.381 0.00 0.00 0.00 3.02
4941 6059 1.203287 TCCACTCGATCACAGCTCAAG 59.797 52.381 0.00 0.00 0.00 3.02
4942 6060 1.067565 GTCCACTCGATCACAGCTCAA 60.068 52.381 0.00 0.00 0.00 3.02
4943 6061 0.528017 GTCCACTCGATCACAGCTCA 59.472 55.000 0.00 0.00 0.00 4.26
4944 6062 0.814457 AGTCCACTCGATCACAGCTC 59.186 55.000 0.00 0.00 0.00 4.09
4945 6063 0.529833 CAGTCCACTCGATCACAGCT 59.470 55.000 0.00 0.00 0.00 4.24
4946 6064 1.080995 GCAGTCCACTCGATCACAGC 61.081 60.000 0.00 0.00 0.00 4.40
4947 6065 0.244721 TGCAGTCCACTCGATCACAG 59.755 55.000 0.00 0.00 0.00 3.66
4948 6066 0.244721 CTGCAGTCCACTCGATCACA 59.755 55.000 5.25 0.00 0.00 3.58
4949 6067 0.244994 ACTGCAGTCCACTCGATCAC 59.755 55.000 15.25 0.00 0.00 3.06
4950 6068 0.969149 AACTGCAGTCCACTCGATCA 59.031 50.000 21.95 0.00 0.00 2.92
4951 6069 2.086054 AAACTGCAGTCCACTCGATC 57.914 50.000 21.95 0.00 0.00 3.69
4952 6070 2.550830 AAAACTGCAGTCCACTCGAT 57.449 45.000 21.95 0.00 0.00 3.59
4953 6071 2.288825 CCTAAAACTGCAGTCCACTCGA 60.289 50.000 21.95 0.73 0.00 4.04
4954 6072 2.069273 CCTAAAACTGCAGTCCACTCG 58.931 52.381 21.95 6.82 0.00 4.18
4955 6073 2.427506 CCCTAAAACTGCAGTCCACTC 58.572 52.381 21.95 0.00 0.00 3.51
4956 6074 1.545651 GCCCTAAAACTGCAGTCCACT 60.546 52.381 21.95 0.24 0.00 4.00
4957 6075 0.881796 GCCCTAAAACTGCAGTCCAC 59.118 55.000 21.95 2.05 0.00 4.02
4958 6076 0.771127 AGCCCTAAAACTGCAGTCCA 59.229 50.000 21.95 7.32 0.00 4.02
4959 6077 1.168714 CAGCCCTAAAACTGCAGTCC 58.831 55.000 21.95 3.00 0.00 3.85
4960 6078 2.185004 TCAGCCCTAAAACTGCAGTC 57.815 50.000 21.95 5.51 33.80 3.51
4961 6079 2.619074 GGATCAGCCCTAAAACTGCAGT 60.619 50.000 15.25 15.25 33.80 4.40
4962 6080 2.019984 GGATCAGCCCTAAAACTGCAG 58.980 52.381 13.48 13.48 33.80 4.41
4963 6081 1.354031 TGGATCAGCCCTAAAACTGCA 59.646 47.619 0.00 0.00 34.97 4.41
4964 6082 2.128771 TGGATCAGCCCTAAAACTGC 57.871 50.000 0.00 0.00 34.97 4.40
4965 6083 4.463891 ACAAATGGATCAGCCCTAAAACTG 59.536 41.667 0.00 0.00 34.97 3.16
4966 6084 4.677182 ACAAATGGATCAGCCCTAAAACT 58.323 39.130 0.00 0.00 34.97 2.66
4967 6085 5.405935 AACAAATGGATCAGCCCTAAAAC 57.594 39.130 0.00 0.00 34.97 2.43
4968 6086 5.779771 AGAAACAAATGGATCAGCCCTAAAA 59.220 36.000 0.00 0.00 34.97 1.52
4969 6087 5.332743 AGAAACAAATGGATCAGCCCTAAA 58.667 37.500 0.00 0.00 34.97 1.85
4970 6088 4.934356 AGAAACAAATGGATCAGCCCTAA 58.066 39.130 0.00 0.00 34.97 2.69
4971 6089 4.526970 GAGAAACAAATGGATCAGCCCTA 58.473 43.478 0.00 0.00 34.97 3.53
4972 6090 3.359950 GAGAAACAAATGGATCAGCCCT 58.640 45.455 0.00 0.00 34.97 5.19
4973 6091 2.428530 GGAGAAACAAATGGATCAGCCC 59.571 50.000 0.00 0.00 34.97 5.19
4974 6092 3.359950 AGGAGAAACAAATGGATCAGCC 58.640 45.455 0.00 0.00 37.10 4.85
4975 6093 6.705863 AATAGGAGAAACAAATGGATCAGC 57.294 37.500 0.00 0.00 0.00 4.26
4976 6094 8.284945 TCAAATAGGAGAAACAAATGGATCAG 57.715 34.615 0.00 0.00 0.00 2.90
4977 6095 7.890127 ACTCAAATAGGAGAAACAAATGGATCA 59.110 33.333 0.00 0.00 38.30 2.92
4978 6096 8.286191 ACTCAAATAGGAGAAACAAATGGATC 57.714 34.615 0.00 0.00 38.30 3.36
4979 6097 8.655935 AACTCAAATAGGAGAAACAAATGGAT 57.344 30.769 0.00 0.00 38.30 3.41
4980 6098 8.477419 AAACTCAAATAGGAGAAACAAATGGA 57.523 30.769 0.00 0.00 38.30 3.41
4981 6099 8.981647 CAAAACTCAAATAGGAGAAACAAATGG 58.018 33.333 0.00 0.00 38.30 3.16
4982 6100 8.490355 GCAAAACTCAAATAGGAGAAACAAATG 58.510 33.333 0.00 0.00 38.30 2.32
4983 6101 7.657354 GGCAAAACTCAAATAGGAGAAACAAAT 59.343 33.333 0.00 0.00 38.30 2.32
4984 6102 6.983890 GGCAAAACTCAAATAGGAGAAACAAA 59.016 34.615 0.00 0.00 38.30 2.83
4985 6103 6.097554 TGGCAAAACTCAAATAGGAGAAACAA 59.902 34.615 0.00 0.00 38.30 2.83
4986 6104 5.596361 TGGCAAAACTCAAATAGGAGAAACA 59.404 36.000 0.00 0.00 38.30 2.83
4987 6105 6.084326 TGGCAAAACTCAAATAGGAGAAAC 57.916 37.500 0.00 0.00 38.30 2.78
4988 6106 6.916360 ATGGCAAAACTCAAATAGGAGAAA 57.084 33.333 0.00 0.00 38.30 2.52
4989 6107 6.916360 AATGGCAAAACTCAAATAGGAGAA 57.084 33.333 0.00 0.00 38.30 2.87
4990 6108 7.175104 ACTAATGGCAAAACTCAAATAGGAGA 58.825 34.615 0.00 0.00 38.30 3.71
4991 6109 7.396540 ACTAATGGCAAAACTCAAATAGGAG 57.603 36.000 0.00 0.00 40.79 3.69
4992 6110 7.601856 CAACTAATGGCAAAACTCAAATAGGA 58.398 34.615 0.00 0.00 0.00 2.94
4993 6111 6.311200 GCAACTAATGGCAAAACTCAAATAGG 59.689 38.462 0.00 0.00 0.00 2.57
4994 6112 6.867816 TGCAACTAATGGCAAAACTCAAATAG 59.132 34.615 0.00 0.00 37.03 1.73
4995 6113 6.753180 TGCAACTAATGGCAAAACTCAAATA 58.247 32.000 0.00 0.00 37.03 1.40
4996 6114 5.609423 TGCAACTAATGGCAAAACTCAAAT 58.391 33.333 0.00 0.00 37.03 2.32
4997 6115 5.016051 TGCAACTAATGGCAAAACTCAAA 57.984 34.783 0.00 0.00 37.03 2.69
4998 6116 4.099266 ACTGCAACTAATGGCAAAACTCAA 59.901 37.500 0.00 0.00 39.93 3.02
4999 6117 3.636300 ACTGCAACTAATGGCAAAACTCA 59.364 39.130 0.00 0.00 39.93 3.41
5000 6118 4.243007 ACTGCAACTAATGGCAAAACTC 57.757 40.909 0.00 0.00 39.93 3.01
5001 6119 4.099266 TCAACTGCAACTAATGGCAAAACT 59.901 37.500 0.00 0.00 39.93 2.66
5002 6120 4.367450 TCAACTGCAACTAATGGCAAAAC 58.633 39.130 0.00 0.00 39.93 2.43
5003 6121 4.662468 TCAACTGCAACTAATGGCAAAA 57.338 36.364 0.00 0.00 39.93 2.44
5004 6122 4.367450 GTTCAACTGCAACTAATGGCAAA 58.633 39.130 0.00 0.00 39.93 3.68
5005 6123 3.549827 CGTTCAACTGCAACTAATGGCAA 60.550 43.478 0.00 0.00 39.93 4.52
5052 6468 3.078837 AGCAAATACCGTTCGGACAAAT 58.921 40.909 18.28 3.32 0.00 2.32
5098 6514 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
5099 6515 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
5100 6516 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.