Multiple sequence alignment - TraesCS6B01G363700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G363700 chr6B 100.000 5061 0 0 1 5061 634638714 634643774 0.000000e+00 9347.0
1 TraesCS6B01G363700 chr6B 84.101 1302 160 31 2502 3782 634941202 634942477 0.000000e+00 1214.0
2 TraesCS6B01G363700 chr6B 98.052 308 6 0 1611 1918 551770220 551769913 2.070000e-148 536.0
3 TraesCS6B01G363700 chr6B 80.932 687 102 20 3082 3753 634978753 634979425 2.700000e-142 516.0
4 TraesCS6B01G363700 chr6B 92.419 277 18 2 1135 1411 634940041 634940314 4.750000e-105 392.0
5 TraesCS6B01G363700 chr6B 87.597 258 25 6 1156 1408 634976874 634977129 4.960000e-75 292.0
6 TraesCS6B01G363700 chr6B 79.845 129 23 3 4855 4981 22103202 22103075 1.940000e-14 91.6
7 TraesCS6B01G363700 chr6A 89.668 2681 182 49 2431 5060 564404177 564406813 0.000000e+00 3328.0
8 TraesCS6B01G363700 chr6A 89.785 1116 66 22 481 1582 564402720 564403801 0.000000e+00 1386.0
9 TraesCS6B01G363700 chr6A 85.546 1017 111 31 2954 3967 564509414 564510397 0.000000e+00 1031.0
10 TraesCS6B01G363700 chr6A 85.124 605 63 14 809 1411 564507703 564508282 1.210000e-165 593.0
11 TraesCS6B01G363700 chr6A 98.366 306 5 0 1611 1916 584038748 584038443 5.770000e-149 538.0
12 TraesCS6B01G363700 chr6A 79.941 683 103 22 3082 3753 564586278 564586937 5.930000e-129 472.0
13 TraesCS6B01G363700 chr6A 95.763 236 9 1 252 486 564402444 564402679 3.700000e-101 379.0
14 TraesCS6B01G363700 chr6A 89.552 268 17 6 1 263 564402163 564402424 3.780000e-86 329.0
15 TraesCS6B01G363700 chr6A 85.496 262 33 4 1151 1408 564584668 564584928 8.350000e-68 268.0
16 TraesCS6B01G363700 chr6A 86.765 204 14 5 2133 2325 564403869 564404070 1.100000e-51 215.0
17 TraesCS6B01G363700 chr6A 88.667 150 17 0 2586 2735 564509118 564509267 3.110000e-42 183.0
18 TraesCS6B01G363700 chr6D 93.206 1516 66 19 2431 3925 421474012 421472513 0.000000e+00 2194.0
19 TraesCS6B01G363700 chr6D 92.232 1416 74 18 191 1584 421475750 421474349 0.000000e+00 1973.0
20 TraesCS6B01G363700 chr6D 86.783 802 91 9 2954 3755 421789791 421790577 0.000000e+00 880.0
21 TraesCS6B01G363700 chr6D 81.858 689 99 20 3082 3753 421800355 421801034 1.590000e-154 556.0
22 TraesCS6B01G363700 chr6D 85.948 427 42 10 982 1408 421788325 421788733 1.670000e-119 440.0
23 TraesCS6B01G363700 chr6D 88.814 295 20 9 2133 2415 421474289 421473996 2.900000e-92 350.0
24 TraesCS6B01G363700 chr6D 85.489 317 37 8 2502 2813 421789451 421789763 6.320000e-84 322.0
25 TraesCS6B01G363700 chr6D 86.029 272 33 4 1151 1418 421798750 421799020 2.310000e-73 287.0
26 TraesCS6B01G363700 chr6D 93.421 152 5 2 1 150 421475900 421475752 2.370000e-53 220.0
27 TraesCS6B01G363700 chr1B 98.392 311 4 1 1612 1921 12757150 12756840 3.450000e-151 545.0
28 TraesCS6B01G363700 chr1B 96.885 321 10 0 1609 1929 601378501 601378821 5.770000e-149 538.0
29 TraesCS6B01G363700 chr1B 97.444 313 6 2 1612 1923 588322718 588322407 2.680000e-147 532.0
30 TraesCS6B01G363700 chr5B 98.052 308 6 0 1608 1915 674376779 674376472 2.070000e-148 536.0
31 TraesCS6B01G363700 chr4A 97.179 319 6 2 1612 1927 572708719 572708401 2.070000e-148 536.0
32 TraesCS6B01G363700 chr4A 82.609 115 16 4 4229 4342 4478794 4478683 1.160000e-16 99.0
33 TraesCS6B01G363700 chr4A 81.739 115 17 4 4229 4342 4248019 4247908 5.400000e-15 93.5
34 TraesCS6B01G363700 chr2B 98.366 306 4 1 1612 1916 77779291 77779596 2.070000e-148 536.0
35 TraesCS6B01G363700 chr2D 97.436 312 6 2 1608 1917 591307095 591307406 9.650000e-147 531.0
36 TraesCS6B01G363700 chr7B 87.143 70 8 1 4429 4497 379416902 379416971 1.510000e-10 78.7
37 TraesCS6B01G363700 chr1D 83.582 67 11 0 4236 4302 447242539 447242605 4.230000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G363700 chr6B 634638714 634643774 5060 False 9347.000000 9347 100.000000 1 5061 1 chr6B.!!$F1 5060
1 TraesCS6B01G363700 chr6B 634940041 634942477 2436 False 803.000000 1214 88.260000 1135 3782 2 chr6B.!!$F2 2647
2 TraesCS6B01G363700 chr6B 634976874 634979425 2551 False 404.000000 516 84.264500 1156 3753 2 chr6B.!!$F3 2597
3 TraesCS6B01G363700 chr6A 564402163 564406813 4650 False 1127.400000 3328 90.306600 1 5060 5 chr6A.!!$F1 5059
4 TraesCS6B01G363700 chr6A 564507703 564510397 2694 False 602.333333 1031 86.445667 809 3967 3 chr6A.!!$F2 3158
5 TraesCS6B01G363700 chr6A 564584668 564586937 2269 False 370.000000 472 82.718500 1151 3753 2 chr6A.!!$F3 2602
6 TraesCS6B01G363700 chr6D 421472513 421475900 3387 True 1184.250000 2194 91.918250 1 3925 4 chr6D.!!$R1 3924
7 TraesCS6B01G363700 chr6D 421788325 421790577 2252 False 547.333333 880 86.073333 982 3755 3 chr6D.!!$F1 2773
8 TraesCS6B01G363700 chr6D 421798750 421801034 2284 False 421.500000 556 83.943500 1151 3753 2 chr6D.!!$F2 2602

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
494 534 0.889994 ACATCTACGTAACGCCCACA 59.110 50.0 0.00 0.00 0.00 4.17 F
1826 1971 0.033601 AGTCTCTCGGAGGTGCTCAT 60.034 55.0 4.96 0.00 31.08 2.90 F
1876 2021 0.031585 GGGATGAGTGTATGCGCGTA 59.968 55.0 8.43 4.92 0.00 4.42 F
2945 4294 0.230260 TTTGTGTCGTTAACTCGCGC 59.770 50.0 0.00 0.00 0.00 6.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1857 2002 0.031585 TACGCGCATACACTCATCCC 59.968 55.0 5.73 0.00 0.00 3.85 R
2943 4292 0.317938 GCTCTCCACATAGGTACGCG 60.318 60.0 3.53 3.53 39.02 6.01 R
3717 5236 0.674534 GTGATTCCGCCGATCCTAGT 59.325 55.0 0.00 0.00 0.00 2.57 R
4768 6305 0.035820 TCCACCACCACGCCTAAATC 60.036 55.0 0.00 0.00 0.00 2.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
88 91 4.334481 AGAACACGTTCCGTTTTCATTTCT 59.666 37.500 15.38 3.00 45.24 2.52
89 92 4.625972 ACACGTTCCGTTTTCATTTCTT 57.374 36.364 0.00 0.00 38.32 2.52
90 93 4.594136 ACACGTTCCGTTTTCATTTCTTC 58.406 39.130 0.00 0.00 38.32 2.87
125 128 5.784177 GGAACTTTCCATTTCCTCCTTTTC 58.216 41.667 2.93 0.00 46.76 2.29
172 175 6.638873 CGTATTTGCACTTTGTTTCCACATTA 59.361 34.615 0.00 0.00 31.06 1.90
178 182 5.342259 GCACTTTGTTTCCACATTATTCGTC 59.658 40.000 0.00 0.00 31.06 4.20
186 190 6.567687 TTCCACATTATTCGTCAACACAAT 57.432 33.333 0.00 0.00 0.00 2.71
212 216 3.889815 AGATTCCGCTCCATTTTGATCA 58.110 40.909 0.00 0.00 0.00 2.92
218 222 4.576053 TCCGCTCCATTTTGATCATTGTAG 59.424 41.667 0.00 0.00 0.00 2.74
334 374 3.284449 AACGCAACCCCGACTTGC 61.284 61.111 0.00 0.00 40.61 4.01
340 380 1.026718 CAACCCCGACTTGCAGGATC 61.027 60.000 1.40 0.00 0.00 3.36
364 404 1.668419 CAGATAACCGCCCTCCTTTG 58.332 55.000 0.00 0.00 0.00 2.77
453 493 2.434428 GTACTTCTCGTCTGACCTCCA 58.566 52.381 1.55 0.00 0.00 3.86
486 526 3.428452 CGGCCTCTTCAACATCTACGTAA 60.428 47.826 0.00 0.00 0.00 3.18
487 527 3.864003 GGCCTCTTCAACATCTACGTAAC 59.136 47.826 0.00 0.00 0.00 2.50
488 528 3.546670 GCCTCTTCAACATCTACGTAACG 59.453 47.826 0.00 0.00 0.00 3.18
489 529 3.546670 CCTCTTCAACATCTACGTAACGC 59.453 47.826 0.00 0.00 0.00 4.84
490 530 3.504863 TCTTCAACATCTACGTAACGCC 58.495 45.455 0.00 0.00 0.00 5.68
491 531 2.282701 TCAACATCTACGTAACGCCC 57.717 50.000 0.00 0.00 0.00 6.13
492 532 1.545136 TCAACATCTACGTAACGCCCA 59.455 47.619 0.00 0.00 0.00 5.36
493 533 1.657094 CAACATCTACGTAACGCCCAC 59.343 52.381 0.00 0.00 0.00 4.61
494 534 0.889994 ACATCTACGTAACGCCCACA 59.110 50.000 0.00 0.00 0.00 4.17
511 594 2.157668 CCACAATCTTGGTCGTTTCTCG 59.842 50.000 0.00 0.00 41.41 4.04
513 596 3.985279 CACAATCTTGGTCGTTTCTCGTA 59.015 43.478 0.00 0.00 40.80 3.43
527 610 4.639135 TTCTCGTACACATCCTGATCTG 57.361 45.455 0.00 0.00 0.00 2.90
532 615 2.398252 ACACATCCTGATCTGCACAG 57.602 50.000 0.00 0.00 35.43 3.66
603 686 1.139256 CATGCCATATGCCAAAGCCAA 59.861 47.619 0.00 0.00 40.16 4.52
637 720 9.806203 GCAATTATTTCATGCCATATATGCTAA 57.194 29.630 7.24 0.00 34.03 3.09
885 976 0.950555 GCACTCGTCTCCATGCACAA 60.951 55.000 0.00 0.00 38.00 3.33
888 979 1.202639 ACTCGTCTCCATGCACAACAA 60.203 47.619 0.00 0.00 0.00 2.83
920 1011 5.750067 GCAACAAAAGATATATTGCACCCTG 59.250 40.000 2.54 0.00 44.01 4.45
969 1060 3.181471 ACAGCAGCTCTAGTTTCGCATAT 60.181 43.478 0.00 0.00 0.00 1.78
975 1066 6.034044 GCAGCTCTAGTTTCGCATATATACAC 59.966 42.308 0.00 0.00 0.00 2.90
1142 1241 1.152881 CCAGCAATGGGGGAGTAGC 60.153 63.158 0.00 0.00 0.00 3.58
1143 1242 1.609239 CAGCAATGGGGGAGTAGCA 59.391 57.895 0.00 0.00 0.00 3.49
1144 1243 0.465097 CAGCAATGGGGGAGTAGCAG 60.465 60.000 0.00 0.00 0.00 4.24
1148 1247 0.695803 AATGGGGGAGTAGCAGAGGG 60.696 60.000 0.00 0.00 0.00 4.30
1346 1445 3.423154 CTGGGCCTTCAACGACGC 61.423 66.667 4.53 0.00 0.00 5.19
1371 1473 4.722700 AACCGGCCGCTGCAGATT 62.723 61.111 22.85 1.33 40.13 2.40
1445 1580 4.682401 GCTAGGCGCTAGAGTAAATCTTTC 59.318 45.833 7.64 0.00 39.64 2.62
1541 1686 6.212955 ACTTGAATTTTATGGGTTTGTCGTG 58.787 36.000 0.00 0.00 0.00 4.35
1544 1689 3.634568 TTTTATGGGTTTGTCGTGCTG 57.365 42.857 0.00 0.00 0.00 4.41
1553 1698 0.733909 TTGTCGTGCTGATGCGAGAG 60.734 55.000 0.00 0.00 43.34 3.20
1581 1726 5.810525 TCCGTCGCAGTAAAGTTATAGTAC 58.189 41.667 0.00 0.00 0.00 2.73
1584 1729 6.848296 CCGTCGCAGTAAAGTTATAGTACTAC 59.152 42.308 4.31 0.00 0.00 2.73
1585 1730 7.401860 CGTCGCAGTAAAGTTATAGTACTACA 58.598 38.462 4.31 0.00 0.00 2.74
1586 1731 7.371875 CGTCGCAGTAAAGTTATAGTACTACAC 59.628 40.741 4.31 5.39 0.00 2.90
1587 1732 7.371875 GTCGCAGTAAAGTTATAGTACTACACG 59.628 40.741 4.31 1.58 0.00 4.49
1588 1733 6.630443 CGCAGTAAAGTTATAGTACTACACGG 59.370 42.308 4.31 0.00 0.00 4.94
1589 1734 7.475840 GCAGTAAAGTTATAGTACTACACGGT 58.524 38.462 4.31 2.09 0.00 4.83
1592 1737 9.331282 AGTAAAGTTATAGTACTACACGGTAGG 57.669 37.037 4.31 0.06 0.00 3.18
1593 1738 9.110502 GTAAAGTTATAGTACTACACGGTAGGT 57.889 37.037 4.31 0.00 0.00 3.08
1594 1739 8.581253 AAAGTTATAGTACTACACGGTAGGTT 57.419 34.615 4.31 0.00 0.00 3.50
1595 1740 9.681062 AAAGTTATAGTACTACACGGTAGGTTA 57.319 33.333 4.31 5.52 0.00 2.85
1596 1741 9.681062 AAGTTATAGTACTACACGGTAGGTTAA 57.319 33.333 4.31 0.00 0.00 2.01
1597 1742 9.681062 AGTTATAGTACTACACGGTAGGTTAAA 57.319 33.333 4.31 1.40 0.00 1.52
1622 1767 7.448748 AAAAAGTTATAGTGCGAATCAACCT 57.551 32.000 0.00 0.00 0.00 3.50
1623 1768 6.422776 AAAGTTATAGTGCGAATCAACCTG 57.577 37.500 0.00 0.00 0.00 4.00
1624 1769 5.086104 AGTTATAGTGCGAATCAACCTGT 57.914 39.130 0.00 0.00 0.00 4.00
1625 1770 4.870426 AGTTATAGTGCGAATCAACCTGTG 59.130 41.667 0.00 0.00 0.00 3.66
1626 1771 2.093306 TAGTGCGAATCAACCTGTGG 57.907 50.000 0.00 0.00 0.00 4.17
1627 1772 0.108585 AGTGCGAATCAACCTGTGGT 59.891 50.000 0.00 0.00 37.65 4.16
1637 1782 2.525105 AACCTGTGGTTGAGTTGGTT 57.475 45.000 0.71 0.00 45.07 3.67
1638 1783 3.655615 AACCTGTGGTTGAGTTGGTTA 57.344 42.857 0.71 0.00 45.07 2.85
1639 1784 3.208747 ACCTGTGGTTGAGTTGGTTAG 57.791 47.619 0.00 0.00 27.29 2.34
1640 1785 2.158667 ACCTGTGGTTGAGTTGGTTAGG 60.159 50.000 0.00 0.00 27.29 2.69
1641 1786 2.158667 CCTGTGGTTGAGTTGGTTAGGT 60.159 50.000 0.00 0.00 0.00 3.08
1642 1787 2.878406 CTGTGGTTGAGTTGGTTAGGTG 59.122 50.000 0.00 0.00 0.00 4.00
1643 1788 2.227194 GTGGTTGAGTTGGTTAGGTGG 58.773 52.381 0.00 0.00 0.00 4.61
1644 1789 2.128535 TGGTTGAGTTGGTTAGGTGGA 58.871 47.619 0.00 0.00 0.00 4.02
1645 1790 2.158726 TGGTTGAGTTGGTTAGGTGGAC 60.159 50.000 0.00 0.00 0.00 4.02
1646 1791 2.158726 GGTTGAGTTGGTTAGGTGGACA 60.159 50.000 0.00 0.00 0.00 4.02
1647 1792 3.139077 GTTGAGTTGGTTAGGTGGACAG 58.861 50.000 0.00 0.00 0.00 3.51
1648 1793 2.404559 TGAGTTGGTTAGGTGGACAGT 58.595 47.619 0.00 0.00 0.00 3.55
1649 1794 2.104111 TGAGTTGGTTAGGTGGACAGTG 59.896 50.000 0.00 0.00 0.00 3.66
1650 1795 1.420138 AGTTGGTTAGGTGGACAGTGG 59.580 52.381 0.00 0.00 0.00 4.00
1651 1796 1.142262 GTTGGTTAGGTGGACAGTGGT 59.858 52.381 0.00 0.00 0.00 4.16
1652 1797 2.369532 GTTGGTTAGGTGGACAGTGGTA 59.630 50.000 0.00 0.00 0.00 3.25
1653 1798 2.910544 TGGTTAGGTGGACAGTGGTAT 58.089 47.619 0.00 0.00 0.00 2.73
1654 1799 2.835764 TGGTTAGGTGGACAGTGGTATC 59.164 50.000 0.00 0.00 0.00 2.24
1655 1800 2.169978 GGTTAGGTGGACAGTGGTATCC 59.830 54.545 0.00 0.00 35.37 2.59
1656 1801 2.169978 GTTAGGTGGACAGTGGTATCCC 59.830 54.545 0.00 0.00 33.69 3.85
1657 1802 0.620700 AGGTGGACAGTGGTATCCCC 60.621 60.000 0.00 0.00 33.69 4.81
1658 1803 0.912487 GGTGGACAGTGGTATCCCCA 60.912 60.000 0.00 0.00 42.51 4.96
1665 1810 3.844063 TGGTATCCCCAACCCACC 58.156 61.111 0.00 0.00 41.50 4.61
1666 1811 1.151565 TGGTATCCCCAACCCACCA 60.152 57.895 0.00 0.00 41.50 4.17
1667 1812 1.211567 TGGTATCCCCAACCCACCAG 61.212 60.000 0.00 0.00 41.50 4.00
1668 1813 1.613061 GTATCCCCAACCCACCAGG 59.387 63.158 0.00 0.00 43.78 4.45
1669 1814 0.917333 GTATCCCCAACCCACCAGGA 60.917 60.000 0.00 0.00 39.89 3.86
1670 1815 0.047176 TATCCCCAACCCACCAGGAT 59.953 55.000 0.00 0.00 40.43 3.24
1671 1816 0.855400 ATCCCCAACCCACCAGGATT 60.855 55.000 0.00 0.00 39.89 3.01
1672 1817 1.000359 CCCCAACCCACCAGGATTC 60.000 63.158 0.00 0.00 39.89 2.52
1673 1818 1.773635 CCCAACCCACCAGGATTCA 59.226 57.895 0.00 0.00 39.89 2.57
1674 1819 0.114168 CCCAACCCACCAGGATTCAA 59.886 55.000 0.00 0.00 39.89 2.69
1675 1820 1.482177 CCCAACCCACCAGGATTCAAA 60.482 52.381 0.00 0.00 39.89 2.69
1676 1821 2.539302 CCAACCCACCAGGATTCAAAT 58.461 47.619 0.00 0.00 39.89 2.32
1677 1822 2.497273 CCAACCCACCAGGATTCAAATC 59.503 50.000 0.00 0.00 39.89 2.17
1688 1833 1.064654 GATTCAAATCCTGGTGCTCGC 59.935 52.381 0.00 0.00 0.00 5.03
1689 1834 0.250684 TTCAAATCCTGGTGCTCGCA 60.251 50.000 0.00 0.00 0.00 5.10
1690 1835 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.000 0.00 0.00 0.00 4.73
1691 1836 0.813184 CAAATCCTGGTGCTCGCATT 59.187 50.000 0.00 0.00 0.00 3.56
1692 1837 2.016318 CAAATCCTGGTGCTCGCATTA 58.984 47.619 0.00 0.00 0.00 1.90
1693 1838 2.620115 CAAATCCTGGTGCTCGCATTAT 59.380 45.455 0.00 0.00 0.00 1.28
1694 1839 2.645838 ATCCTGGTGCTCGCATTATT 57.354 45.000 0.00 0.00 0.00 1.40
1695 1840 1.953559 TCCTGGTGCTCGCATTATTC 58.046 50.000 0.00 0.00 0.00 1.75
1696 1841 0.947244 CCTGGTGCTCGCATTATTCC 59.053 55.000 0.00 0.00 0.00 3.01
1697 1842 1.475751 CCTGGTGCTCGCATTATTCCT 60.476 52.381 0.00 0.00 0.00 3.36
1698 1843 1.600957 CTGGTGCTCGCATTATTCCTG 59.399 52.381 0.00 0.00 0.00 3.86
1699 1844 0.947244 GGTGCTCGCATTATTCCTGG 59.053 55.000 0.00 0.00 0.00 4.45
1700 1845 1.475034 GGTGCTCGCATTATTCCTGGA 60.475 52.381 0.00 0.00 0.00 3.86
1701 1846 2.498167 GTGCTCGCATTATTCCTGGAT 58.502 47.619 0.00 0.00 0.00 3.41
1702 1847 2.880890 GTGCTCGCATTATTCCTGGATT 59.119 45.455 0.00 0.00 0.00 3.01
1703 1848 3.316308 GTGCTCGCATTATTCCTGGATTT 59.684 43.478 0.00 0.00 0.00 2.17
1704 1849 4.515191 GTGCTCGCATTATTCCTGGATTTA 59.485 41.667 0.00 0.00 0.00 1.40
1705 1850 5.182001 GTGCTCGCATTATTCCTGGATTTAT 59.818 40.000 0.00 0.00 0.00 1.40
1706 1851 5.769662 TGCTCGCATTATTCCTGGATTTATT 59.230 36.000 0.00 0.00 0.00 1.40
1707 1852 6.265196 TGCTCGCATTATTCCTGGATTTATTT 59.735 34.615 0.00 0.00 0.00 1.40
1708 1853 6.803807 GCTCGCATTATTCCTGGATTTATTTC 59.196 38.462 0.00 0.00 0.00 2.17
1709 1854 7.522073 GCTCGCATTATTCCTGGATTTATTTCA 60.522 37.037 0.00 0.00 0.00 2.69
1710 1855 7.874940 TCGCATTATTCCTGGATTTATTTCAG 58.125 34.615 0.00 0.00 0.00 3.02
1711 1856 7.040478 TCGCATTATTCCTGGATTTATTTCAGG 60.040 37.037 0.00 0.00 46.91 3.86
1719 1864 6.076981 CTGGATTTATTTCAGGATTTCCGG 57.923 41.667 0.00 0.00 42.08 5.14
1720 1865 4.340950 TGGATTTATTTCAGGATTTCCGGC 59.659 41.667 0.00 0.00 42.08 6.13
1721 1866 4.537015 GATTTATTTCAGGATTTCCGGCG 58.463 43.478 0.00 0.00 42.08 6.46
1722 1867 2.992124 TATTTCAGGATTTCCGGCGA 57.008 45.000 9.30 0.00 42.08 5.54
1723 1868 2.348411 ATTTCAGGATTTCCGGCGAT 57.652 45.000 9.30 0.00 42.08 4.58
1724 1869 1.378531 TTTCAGGATTTCCGGCGATG 58.621 50.000 9.30 0.00 42.08 3.84
1725 1870 1.095228 TTCAGGATTTCCGGCGATGC 61.095 55.000 9.30 0.00 42.08 3.91
1726 1871 2.588877 AGGATTTCCGGCGATGCG 60.589 61.111 9.30 0.00 42.08 4.73
1737 1882 2.787249 CGATGCGCTTTCAGTGGG 59.213 61.111 9.73 0.00 0.00 4.61
1738 1883 1.741401 CGATGCGCTTTCAGTGGGA 60.741 57.895 9.73 0.00 0.00 4.37
1739 1884 1.699656 CGATGCGCTTTCAGTGGGAG 61.700 60.000 9.73 0.00 0.00 4.30
1740 1885 1.372087 GATGCGCTTTCAGTGGGAGG 61.372 60.000 9.73 0.00 0.00 4.30
1741 1886 1.841302 ATGCGCTTTCAGTGGGAGGA 61.841 55.000 9.73 0.00 0.00 3.71
1742 1887 1.743252 GCGCTTTCAGTGGGAGGAG 60.743 63.158 0.00 0.00 0.00 3.69
1743 1888 1.975327 CGCTTTCAGTGGGAGGAGA 59.025 57.895 0.00 0.00 0.00 3.71
1744 1889 0.390472 CGCTTTCAGTGGGAGGAGAC 60.390 60.000 0.00 0.00 0.00 3.36
1745 1890 0.390472 GCTTTCAGTGGGAGGAGACG 60.390 60.000 0.00 0.00 0.00 4.18
1746 1891 0.969894 CTTTCAGTGGGAGGAGACGT 59.030 55.000 0.00 0.00 0.00 4.34
1747 1892 1.344763 CTTTCAGTGGGAGGAGACGTT 59.655 52.381 0.00 0.00 0.00 3.99
1748 1893 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
1771 1916 2.353607 GACGACGAGGCGCCTATG 60.354 66.667 32.97 27.02 33.86 2.23
1772 1917 3.825833 GACGACGAGGCGCCTATGG 62.826 68.421 32.97 23.64 33.86 2.74
1773 1918 3.900892 CGACGAGGCGCCTATGGT 61.901 66.667 32.97 26.91 0.00 3.55
1774 1919 2.279517 GACGAGGCGCCTATGGTG 60.280 66.667 32.97 18.94 36.10 4.17
1775 1920 2.758327 ACGAGGCGCCTATGGTGA 60.758 61.111 32.97 0.00 34.74 4.02
1776 1921 2.279517 CGAGGCGCCTATGGTGAC 60.280 66.667 32.97 14.51 42.50 3.67
1779 1924 4.126524 GGCGCCTATGGTGACTTC 57.873 61.111 22.15 0.00 38.38 3.01
1780 1925 1.883084 GGCGCCTATGGTGACTTCG 60.883 63.158 22.15 0.00 38.38 3.79
1781 1926 1.153628 GCGCCTATGGTGACTTCGT 60.154 57.895 0.00 0.00 34.74 3.85
1782 1927 0.101759 GCGCCTATGGTGACTTCGTA 59.898 55.000 0.00 0.00 34.74 3.43
1783 1928 1.470285 GCGCCTATGGTGACTTCGTAA 60.470 52.381 0.00 0.00 34.74 3.18
1784 1929 2.883574 CGCCTATGGTGACTTCGTAAA 58.116 47.619 0.00 0.00 34.74 2.01
1785 1930 3.454375 CGCCTATGGTGACTTCGTAAAT 58.546 45.455 0.00 0.00 34.74 1.40
1786 1931 3.489785 CGCCTATGGTGACTTCGTAAATC 59.510 47.826 0.00 0.00 34.74 2.17
1787 1932 4.694339 GCCTATGGTGACTTCGTAAATCT 58.306 43.478 0.00 0.00 0.00 2.40
1788 1933 4.745620 GCCTATGGTGACTTCGTAAATCTC 59.254 45.833 0.00 0.00 0.00 2.75
1789 1934 5.681437 GCCTATGGTGACTTCGTAAATCTCA 60.681 44.000 0.00 0.00 0.00 3.27
1790 1935 6.338146 CCTATGGTGACTTCGTAAATCTCAA 58.662 40.000 0.00 0.00 0.00 3.02
1791 1936 6.477033 CCTATGGTGACTTCGTAAATCTCAAG 59.523 42.308 0.00 0.00 0.00 3.02
1792 1937 5.462530 TGGTGACTTCGTAAATCTCAAGA 57.537 39.130 0.00 0.00 0.00 3.02
1793 1938 6.037786 TGGTGACTTCGTAAATCTCAAGAT 57.962 37.500 0.00 0.00 36.07 2.40
1794 1939 5.869344 TGGTGACTTCGTAAATCTCAAGATG 59.131 40.000 0.00 0.00 34.49 2.90
1795 1940 6.100004 GGTGACTTCGTAAATCTCAAGATGA 58.900 40.000 0.00 0.00 34.49 2.92
1796 1941 6.758886 GGTGACTTCGTAAATCTCAAGATGAT 59.241 38.462 0.00 0.00 34.49 2.45
1797 1942 7.921214 GGTGACTTCGTAAATCTCAAGATGATA 59.079 37.037 0.00 0.00 34.49 2.15
1798 1943 9.469807 GTGACTTCGTAAATCTCAAGATGATAT 57.530 33.333 0.00 0.00 34.49 1.63
1799 1944 9.468532 TGACTTCGTAAATCTCAAGATGATATG 57.531 33.333 0.00 0.00 34.49 1.78
1800 1945 8.304202 ACTTCGTAAATCTCAAGATGATATGC 57.696 34.615 0.00 0.00 34.49 3.14
1801 1946 7.386299 ACTTCGTAAATCTCAAGATGATATGCC 59.614 37.037 0.00 0.00 34.49 4.40
1802 1947 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
1803 1948 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
1804 1949 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
1805 1950 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
1806 1951 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
1807 1952 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
1808 1953 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
1809 1954 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
1810 1955 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
1811 1956 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
1812 1957 0.676184 TGATATGCCGGCTCAGTCTC 59.324 55.000 29.70 15.31 0.00 3.36
1813 1958 0.965439 GATATGCCGGCTCAGTCTCT 59.035 55.000 29.70 3.16 0.00 3.10
1814 1959 0.965439 ATATGCCGGCTCAGTCTCTC 59.035 55.000 29.70 0.00 0.00 3.20
1815 1960 1.448119 TATGCCGGCTCAGTCTCTCG 61.448 60.000 29.70 0.00 0.00 4.04
1816 1961 4.200283 GCCGGCTCAGTCTCTCGG 62.200 72.222 22.15 0.00 43.13 4.63
1817 1962 2.438614 CCGGCTCAGTCTCTCGGA 60.439 66.667 0.00 0.00 42.94 4.55
1818 1963 2.477176 CCGGCTCAGTCTCTCGGAG 61.477 68.421 0.00 0.00 42.94 4.63
1819 1964 2.477176 CGGCTCAGTCTCTCGGAGG 61.477 68.421 4.96 0.00 38.48 4.30
1820 1965 1.379309 GGCTCAGTCTCTCGGAGGT 60.379 63.158 4.96 0.00 38.48 3.85
1821 1966 1.662438 GGCTCAGTCTCTCGGAGGTG 61.662 65.000 4.96 0.00 38.48 4.00
1822 1967 1.806568 CTCAGTCTCTCGGAGGTGC 59.193 63.158 4.96 0.00 35.32 5.01
1823 1968 0.679640 CTCAGTCTCTCGGAGGTGCT 60.680 60.000 4.96 0.00 35.32 4.40
1824 1969 0.678366 TCAGTCTCTCGGAGGTGCTC 60.678 60.000 4.96 0.00 0.00 4.26
1825 1970 0.962855 CAGTCTCTCGGAGGTGCTCA 60.963 60.000 4.96 0.00 31.08 4.26
1826 1971 0.033601 AGTCTCTCGGAGGTGCTCAT 60.034 55.000 4.96 0.00 31.08 2.90
1827 1972 1.213182 AGTCTCTCGGAGGTGCTCATA 59.787 52.381 4.96 0.00 31.08 2.15
1828 1973 1.606668 GTCTCTCGGAGGTGCTCATAG 59.393 57.143 4.96 0.00 31.08 2.23
1829 1974 0.958091 CTCTCGGAGGTGCTCATAGG 59.042 60.000 4.96 0.00 31.08 2.57
1830 1975 0.468214 TCTCGGAGGTGCTCATAGGG 60.468 60.000 4.96 0.00 31.08 3.53
1831 1976 1.457643 TCGGAGGTGCTCATAGGGG 60.458 63.158 0.00 0.00 31.08 4.79
1832 1977 1.762460 CGGAGGTGCTCATAGGGGT 60.762 63.158 0.00 0.00 31.08 4.95
1833 1978 0.469331 CGGAGGTGCTCATAGGGGTA 60.469 60.000 0.00 0.00 31.08 3.69
1834 1979 1.343069 GGAGGTGCTCATAGGGGTAG 58.657 60.000 0.00 0.00 31.08 3.18
1835 1980 1.343069 GAGGTGCTCATAGGGGTAGG 58.657 60.000 0.00 0.00 0.00 3.18
1836 1981 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.000 0.00 0.00 0.00 3.53
1837 1982 0.400093 GGTGCTCATAGGGGTAGGGT 60.400 60.000 0.00 0.00 0.00 4.34
1838 1983 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
1839 1984 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
1840 1985 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
1841 1986 0.759346 CTCATAGGGGTAGGGTGTGC 59.241 60.000 0.00 0.00 0.00 4.57
1842 1987 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
1843 1988 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
1844 1989 1.335132 ATAGGGGTAGGGTGTGCGTG 61.335 60.000 0.00 0.00 0.00 5.34
1845 1990 2.735151 TAGGGGTAGGGTGTGCGTGT 62.735 60.000 0.00 0.00 0.00 4.49
1846 1991 2.358247 GGGTAGGGTGTGCGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
1847 1992 2.424302 GGTAGGGTGTGCGTGTGT 59.576 61.111 0.00 0.00 0.00 3.72
1848 1993 1.959226 GGTAGGGTGTGCGTGTGTG 60.959 63.158 0.00 0.00 0.00 3.82
1849 1994 2.280524 TAGGGTGTGCGTGTGTGC 60.281 61.111 0.00 0.00 0.00 4.57
1852 1997 3.871574 GGTGTGCGTGTGTGCGTT 61.872 61.111 0.00 0.00 37.81 4.84
1853 1998 2.350760 GTGTGCGTGTGTGCGTTC 60.351 61.111 0.00 0.00 37.81 3.95
1854 1999 2.815647 TGTGCGTGTGTGCGTTCA 60.816 55.556 0.00 0.00 37.81 3.18
1855 2000 2.176926 TGTGCGTGTGTGCGTTCAT 61.177 52.632 0.00 0.00 37.81 2.57
1856 2001 0.876342 TGTGCGTGTGTGCGTTCATA 60.876 50.000 0.00 0.00 37.81 2.15
1857 2002 0.179250 GTGCGTGTGTGCGTTCATAG 60.179 55.000 0.00 0.00 37.81 2.23
1858 2003 1.288419 TGCGTGTGTGCGTTCATAGG 61.288 55.000 0.00 0.00 37.81 2.57
1859 2004 1.966493 GCGTGTGTGCGTTCATAGGG 61.966 60.000 0.00 0.00 0.00 3.53
1860 2005 0.389296 CGTGTGTGCGTTCATAGGGA 60.389 55.000 0.00 0.00 0.00 4.20
1861 2006 1.739035 CGTGTGTGCGTTCATAGGGAT 60.739 52.381 0.00 0.00 0.00 3.85
1862 2007 1.665679 GTGTGTGCGTTCATAGGGATG 59.334 52.381 0.00 0.00 0.00 3.51
1863 2008 1.552792 TGTGTGCGTTCATAGGGATGA 59.447 47.619 0.00 0.00 40.45 2.92
1864 2009 2.205074 GTGTGCGTTCATAGGGATGAG 58.795 52.381 0.00 0.00 43.03 2.90
1865 2010 1.831106 TGTGCGTTCATAGGGATGAGT 59.169 47.619 0.00 0.00 43.03 3.41
1866 2011 2.205074 GTGCGTTCATAGGGATGAGTG 58.795 52.381 0.00 0.00 43.03 3.51
1867 2012 1.831106 TGCGTTCATAGGGATGAGTGT 59.169 47.619 0.00 0.00 43.03 3.55
1868 2013 3.028130 TGCGTTCATAGGGATGAGTGTA 58.972 45.455 0.00 0.00 43.03 2.90
1869 2014 3.641436 TGCGTTCATAGGGATGAGTGTAT 59.359 43.478 0.00 0.00 43.03 2.29
1870 2015 3.990469 GCGTTCATAGGGATGAGTGTATG 59.010 47.826 0.00 0.00 43.03 2.39
1871 2016 3.990469 CGTTCATAGGGATGAGTGTATGC 59.010 47.826 0.00 0.00 43.03 3.14
1872 2017 3.942130 TCATAGGGATGAGTGTATGCG 57.058 47.619 0.00 0.00 37.15 4.73
1873 2018 2.029020 TCATAGGGATGAGTGTATGCGC 60.029 50.000 0.00 0.00 37.15 6.09
1874 2019 0.313987 TAGGGATGAGTGTATGCGCG 59.686 55.000 0.00 0.00 0.00 6.86
1875 2020 1.227263 GGGATGAGTGTATGCGCGT 60.227 57.895 8.43 7.55 0.00 6.01
1876 2021 0.031585 GGGATGAGTGTATGCGCGTA 59.968 55.000 8.43 4.92 0.00 4.42
1877 2022 1.336887 GGGATGAGTGTATGCGCGTAT 60.337 52.381 15.52 15.52 0.00 3.06
1878 2023 2.094906 GGGATGAGTGTATGCGCGTATA 60.095 50.000 13.13 13.13 0.00 1.47
1879 2024 3.428999 GGGATGAGTGTATGCGCGTATAT 60.429 47.826 19.79 4.31 0.00 0.86
1880 2025 4.201980 GGGATGAGTGTATGCGCGTATATA 60.202 45.833 19.79 14.59 0.00 0.86
1881 2026 5.507482 GGGATGAGTGTATGCGCGTATATAT 60.507 44.000 19.79 9.03 0.00 0.86
1882 2027 5.399596 GGATGAGTGTATGCGCGTATATATG 59.600 44.000 19.79 0.00 0.00 1.78
1883 2028 5.554822 TGAGTGTATGCGCGTATATATGA 57.445 39.130 19.79 3.29 0.00 2.15
1884 2029 5.569413 TGAGTGTATGCGCGTATATATGAG 58.431 41.667 19.79 3.76 0.00 2.90
1885 2030 4.352039 AGTGTATGCGCGTATATATGAGC 58.648 43.478 19.79 20.14 38.31 4.26
1890 2035 2.959586 CGCGTATATATGAGCGCTTG 57.040 50.000 13.26 7.35 46.56 4.01
1891 2036 2.251040 CGCGTATATATGAGCGCTTGT 58.749 47.619 13.26 5.98 46.56 3.16
1892 2037 2.026860 CGCGTATATATGAGCGCTTGTG 59.973 50.000 13.26 6.56 46.56 3.33
1893 2038 2.987149 GCGTATATATGAGCGCTTGTGT 59.013 45.455 13.26 4.27 45.48 3.72
1894 2039 3.059570 GCGTATATATGAGCGCTTGTGTC 59.940 47.826 13.26 0.00 45.48 3.67
1895 2040 4.476862 CGTATATATGAGCGCTTGTGTCT 58.523 43.478 13.26 0.00 0.00 3.41
1896 2041 4.322009 CGTATATATGAGCGCTTGTGTCTG 59.678 45.833 13.26 0.00 0.00 3.51
1897 2042 2.680312 ATATGAGCGCTTGTGTCTGT 57.320 45.000 13.26 0.00 0.00 3.41
1898 2043 3.801114 ATATGAGCGCTTGTGTCTGTA 57.199 42.857 13.26 0.00 0.00 2.74
1899 2044 1.714794 ATGAGCGCTTGTGTCTGTAC 58.285 50.000 13.26 0.00 0.00 2.90
1900 2045 0.673985 TGAGCGCTTGTGTCTGTACT 59.326 50.000 13.26 0.00 0.00 2.73
1901 2046 1.063806 GAGCGCTTGTGTCTGTACTG 58.936 55.000 13.26 0.00 0.00 2.74
1902 2047 0.673985 AGCGCTTGTGTCTGTACTGA 59.326 50.000 2.64 0.00 0.00 3.41
1903 2048 1.273606 AGCGCTTGTGTCTGTACTGAT 59.726 47.619 2.64 0.00 0.00 2.90
1904 2049 1.391485 GCGCTTGTGTCTGTACTGATG 59.609 52.381 0.00 0.00 0.00 3.07
1905 2050 1.391485 CGCTTGTGTCTGTACTGATGC 59.609 52.381 5.69 3.20 0.00 3.91
1906 2051 2.693069 GCTTGTGTCTGTACTGATGCT 58.307 47.619 5.69 0.00 0.00 3.79
1907 2052 3.673323 CGCTTGTGTCTGTACTGATGCTA 60.673 47.826 5.69 0.00 0.00 3.49
1908 2053 4.245660 GCTTGTGTCTGTACTGATGCTAA 58.754 43.478 5.69 0.07 0.00 3.09
1909 2054 4.690748 GCTTGTGTCTGTACTGATGCTAAA 59.309 41.667 5.69 0.00 0.00 1.85
1910 2055 5.179368 GCTTGTGTCTGTACTGATGCTAAAA 59.821 40.000 5.69 0.00 0.00 1.52
1911 2056 6.293407 GCTTGTGTCTGTACTGATGCTAAAAA 60.293 38.462 5.69 0.00 0.00 1.94
1969 2114 7.898014 TGGATAGATGGACACGCTAATATAT 57.102 36.000 0.00 0.00 0.00 0.86
1970 2115 7.941919 TGGATAGATGGACACGCTAATATATC 58.058 38.462 0.00 0.00 0.00 1.63
1971 2116 7.780271 TGGATAGATGGACACGCTAATATATCT 59.220 37.037 0.00 0.00 0.00 1.98
1974 2119 7.710676 AGATGGACACGCTAATATATCTTCT 57.289 36.000 0.00 0.00 0.00 2.85
1975 2120 8.128322 AGATGGACACGCTAATATATCTTCTT 57.872 34.615 0.00 0.00 0.00 2.52
1976 2121 9.244292 AGATGGACACGCTAATATATCTTCTTA 57.756 33.333 0.00 0.00 0.00 2.10
1977 2122 9.856488 GATGGACACGCTAATATATCTTCTTAA 57.144 33.333 0.00 0.00 0.00 1.85
1979 2124 8.857098 TGGACACGCTAATATATCTTCTTAACT 58.143 33.333 0.00 0.00 0.00 2.24
1994 2139 8.718102 TCTTCTTAACTAATAACTGCATGTCC 57.282 34.615 0.00 0.00 0.00 4.02
1995 2140 7.769044 TCTTCTTAACTAATAACTGCATGTCCC 59.231 37.037 0.00 0.00 0.00 4.46
1996 2141 6.354130 TCTTAACTAATAACTGCATGTCCCC 58.646 40.000 0.00 0.00 0.00 4.81
1997 2142 4.862641 AACTAATAACTGCATGTCCCCT 57.137 40.909 0.00 0.00 0.00 4.79
1998 2143 4.423625 ACTAATAACTGCATGTCCCCTC 57.576 45.455 0.00 0.00 0.00 4.30
1999 2144 3.780294 ACTAATAACTGCATGTCCCCTCA 59.220 43.478 0.00 0.00 0.00 3.86
2000 2145 3.737559 AATAACTGCATGTCCCCTCAA 57.262 42.857 0.00 0.00 0.00 3.02
2001 2146 3.737559 ATAACTGCATGTCCCCTCAAA 57.262 42.857 0.00 0.00 0.00 2.69
2002 2147 2.380064 AACTGCATGTCCCCTCAAAA 57.620 45.000 0.00 0.00 0.00 2.44
2003 2148 2.380064 ACTGCATGTCCCCTCAAAAA 57.620 45.000 0.00 0.00 0.00 1.94
2080 2233 8.954950 TTTTTGTGTGAAATAACCACATCATT 57.045 26.923 0.00 0.00 45.00 2.57
2081 2234 8.954950 TTTTGTGTGAAATAACCACATCATTT 57.045 26.923 0.00 0.00 45.00 2.32
2082 2235 8.586570 TTTGTGTGAAATAACCACATCATTTC 57.413 30.769 0.00 0.00 45.00 2.17
2083 2236 6.686630 TGTGTGAAATAACCACATCATTTCC 58.313 36.000 0.00 0.00 45.00 3.13
2084 2237 6.099341 GTGTGAAATAACCACATCATTTCCC 58.901 40.000 0.00 0.00 45.00 3.97
2085 2238 6.015918 TGTGAAATAACCACATCATTTCCCT 58.984 36.000 0.00 0.00 39.36 4.20
2086 2239 6.496565 TGTGAAATAACCACATCATTTCCCTT 59.503 34.615 0.00 0.00 39.36 3.95
2087 2240 7.016072 TGTGAAATAACCACATCATTTCCCTTT 59.984 33.333 0.00 0.00 39.36 3.11
2088 2241 7.877612 GTGAAATAACCACATCATTTCCCTTTT 59.122 33.333 0.00 0.00 37.70 2.27
2089 2242 8.435982 TGAAATAACCACATCATTTCCCTTTTT 58.564 29.630 0.00 0.00 37.70 1.94
2111 2264 5.993748 TTTTGGAGGGAAATAACCACATC 57.006 39.130 0.00 0.00 31.87 3.06
2112 2265 4.666412 TTGGAGGGAAATAACCACATCA 57.334 40.909 0.00 0.00 31.87 3.07
2113 2266 4.879295 TGGAGGGAAATAACCACATCAT 57.121 40.909 0.00 0.00 0.00 2.45
2114 2267 5.205517 TGGAGGGAAATAACCACATCATT 57.794 39.130 0.00 0.00 0.00 2.57
2115 2268 5.588845 TGGAGGGAAATAACCACATCATTT 58.411 37.500 0.00 0.00 0.00 2.32
2116 2269 5.656416 TGGAGGGAAATAACCACATCATTTC 59.344 40.000 0.00 0.00 37.75 2.17
2223 2904 9.835389 TGTAATTAACGGGTACTGCTAATTAAT 57.165 29.630 11.98 0.00 44.58 1.40
2229 2917 7.549615 ACGGGTACTGCTAATTAATCTTTTC 57.450 36.000 0.00 0.00 39.14 2.29
2415 3573 5.795972 TGCACCAATTCATGATGAACATTT 58.204 33.333 10.45 0.00 39.45 2.32
2416 3574 6.231951 TGCACCAATTCATGATGAACATTTT 58.768 32.000 10.45 0.00 39.45 1.82
2417 3575 6.711194 TGCACCAATTCATGATGAACATTTTT 59.289 30.769 10.45 0.00 39.45 1.94
2437 3595 2.758736 TTTTTGCGGGGGAATTCATG 57.241 45.000 7.93 0.00 0.00 3.07
2438 3596 1.930251 TTTTGCGGGGGAATTCATGA 58.070 45.000 7.93 0.00 0.00 3.07
2439 3597 2.157640 TTTGCGGGGGAATTCATGAT 57.842 45.000 7.93 0.00 0.00 2.45
2440 3598 1.401761 TTGCGGGGGAATTCATGATG 58.598 50.000 7.93 0.00 0.00 3.07
2441 3599 0.550432 TGCGGGGGAATTCATGATGA 59.450 50.000 7.93 0.00 0.00 2.92
2442 3600 1.064091 TGCGGGGGAATTCATGATGAA 60.064 47.619 10.65 10.65 41.09 2.57
2443 3601 1.338020 GCGGGGGAATTCATGATGAAC 59.662 52.381 10.45 0.00 39.45 3.18
2444 3602 2.653726 CGGGGGAATTCATGATGAACA 58.346 47.619 10.45 0.00 39.45 3.18
2445 3603 3.225104 CGGGGGAATTCATGATGAACAT 58.775 45.455 10.45 2.42 39.45 2.71
2448 3606 5.301551 CGGGGGAATTCATGATGAACATTAA 59.698 40.000 10.45 0.00 39.45 1.40
2623 3909 2.359975 GGGTGACTTTGGCGGGAG 60.360 66.667 0.00 0.00 0.00 4.30
2645 3931 2.343758 CAGTACGTGCAGTGGGCT 59.656 61.111 6.38 0.00 45.15 5.19
2648 3934 0.246635 AGTACGTGCAGTGGGCTAAG 59.753 55.000 6.38 0.00 45.15 2.18
2664 3950 0.770557 TAAGGACCAGGGCCACAACT 60.771 55.000 16.27 0.00 0.00 3.16
2743 4031 2.800159 ATCAAGGTCCGTCCCGTCCT 62.800 60.000 0.00 0.00 36.75 3.85
2745 4033 4.755507 AGGTCCGTCCCGTCCTCC 62.756 72.222 0.00 0.00 36.75 4.30
2786 4075 0.242555 TGACTAATCGCGTGCACTCA 59.757 50.000 16.19 6.16 0.00 3.41
2894 4231 2.355756 TGCACCGTATACTCTTCCGTAC 59.644 50.000 0.56 0.00 0.00 3.67
2928 4269 7.903145 TCTTGGATATGCACCGTATATACTTT 58.097 34.615 11.05 0.00 0.00 2.66
2943 4292 4.898328 ATACTTTGTGTCGTTAACTCGC 57.102 40.909 3.71 4.42 0.00 5.03
2945 4294 0.230260 TTTGTGTCGTTAACTCGCGC 59.770 50.000 0.00 0.00 0.00 6.86
2950 4299 1.511887 TCGTTAACTCGCGCGTACC 60.512 57.895 30.98 6.54 0.00 3.34
2952 4301 0.247655 CGTTAACTCGCGCGTACCTA 60.248 55.000 30.98 13.99 0.00 3.08
2997 4346 1.485066 AGAGTCAACAACTTCACGGGT 59.515 47.619 0.00 0.00 38.74 5.28
3322 4821 0.660595 ACAGAGAAACGACGCACGAG 60.661 55.000 9.43 0.00 45.77 4.18
3323 4822 1.081376 AGAGAAACGACGCACGAGG 60.081 57.895 9.43 0.00 45.77 4.63
3717 5236 2.204034 TGGTCTCCCAGGAGTGCA 59.796 61.111 13.36 0.00 42.49 4.57
3757 5276 1.073216 CCGTGAGTCTAGCTTGCGTG 61.073 60.000 0.00 0.00 0.00 5.34
3784 5313 2.755469 ATGGGTGTGCATTCCGCC 60.755 61.111 0.00 0.00 41.33 6.13
3872 5401 4.718961 AGGATAGTTGCAATCGGCTAATT 58.281 39.130 0.59 0.00 45.15 1.40
3873 5402 5.865085 AGGATAGTTGCAATCGGCTAATTA 58.135 37.500 0.59 0.00 45.15 1.40
3874 5403 6.476378 AGGATAGTTGCAATCGGCTAATTAT 58.524 36.000 0.59 0.00 45.15 1.28
3903 5435 5.124457 TCAAGATTGCTCACAAATAAGGCTC 59.876 40.000 0.00 0.00 39.77 4.70
4037 5569 6.437477 GGTTTCATCTTTAACTTTCTCCCCAT 59.563 38.462 0.00 0.00 0.00 4.00
4059 5591 1.489560 CCCCTTCGTCCAACTTCCCT 61.490 60.000 0.00 0.00 0.00 4.20
4061 5593 0.389948 CCTTCGTCCAACTTCCCTCG 60.390 60.000 0.00 0.00 0.00 4.63
4074 5606 1.071471 CCCTCGATTTCCCATCCCG 59.929 63.158 0.00 0.00 0.00 5.14
4084 5616 2.464796 TCCCATCCCGTTCTAGCTAA 57.535 50.000 0.00 0.00 0.00 3.09
4178 5710 6.795590 TCTGATCTTTGGTAACCCCATAAAA 58.204 36.000 0.00 0.00 44.74 1.52
4232 5764 5.885912 GCCTGTTTAGGGAATGATAGAAACA 59.114 40.000 0.00 0.00 44.75 2.83
4233 5765 6.183360 GCCTGTTTAGGGAATGATAGAAACAC 60.183 42.308 0.00 0.00 44.75 3.32
4270 5802 8.980610 TGTCTATTTGTTTTGCATCAAGATTTG 58.019 29.630 0.00 0.00 0.00 2.32
4281 5813 4.201950 GCATCAAGATTTGCTTCGTATGGT 60.202 41.667 0.00 0.00 33.60 3.55
4283 5815 3.616821 TCAAGATTTGCTTCGTATGGTCG 59.383 43.478 0.00 0.00 33.60 4.79
4294 5826 3.441163 TCGTATGGTCGTCTTATTGTGC 58.559 45.455 0.00 0.00 0.00 4.57
4357 5891 9.374838 ACATACCTAGTGTATTAAAAAGGTTCG 57.625 33.333 0.00 0.00 38.10 3.95
4358 5892 9.590451 CATACCTAGTGTATTAAAAAGGTTCGA 57.410 33.333 0.00 0.00 38.10 3.71
4416 5950 8.424274 AATTGAGGACAAGTTTGTTTTTCATC 57.576 30.769 0.00 0.00 42.43 2.92
4417 5951 5.901552 TGAGGACAAGTTTGTTTTTCATCC 58.098 37.500 0.00 0.00 42.43 3.51
4418 5952 5.656416 TGAGGACAAGTTTGTTTTTCATCCT 59.344 36.000 0.00 0.00 42.43 3.24
4426 5960 8.531530 CAAGTTTGTTTTTCATCCTTAAACTCG 58.468 33.333 0.00 0.00 36.28 4.18
4430 5964 6.435428 TGTTTTTCATCCTTAAACTCGCTTC 58.565 36.000 0.00 0.00 33.92 3.86
4437 5971 6.262273 TCATCCTTAAACTCGCTTCAAAGTTT 59.738 34.615 5.87 5.87 45.22 2.66
4445 5979 8.696410 AAACTCGCTTCAAAGTTTAAAAATCA 57.304 26.923 0.00 0.00 42.37 2.57
4448 5982 7.595130 ACTCGCTTCAAAGTTTAAAAATCATCC 59.405 33.333 0.00 0.00 0.00 3.51
4475 6009 4.747810 ACTTCAAAACCAGCAAAACTCAG 58.252 39.130 0.00 0.00 0.00 3.35
4479 6013 1.692411 AACCAGCAAAACTCAGTCCC 58.308 50.000 0.00 0.00 0.00 4.46
4482 6016 1.151668 CAGCAAAACTCAGTCCCTCG 58.848 55.000 0.00 0.00 0.00 4.63
4507 6041 7.484035 ACTAATGAAACCAGATAATCTTCGC 57.516 36.000 0.00 0.00 0.00 4.70
4517 6051 7.783042 ACCAGATAATCTTCGCCCTATATAAC 58.217 38.462 0.00 0.00 0.00 1.89
4519 6053 6.918569 CAGATAATCTTCGCCCTATATAACGG 59.081 42.308 0.00 0.00 0.00 4.44
4526 6060 3.056607 TCGCCCTATATAACGGTTTAGGC 60.057 47.826 10.37 7.97 31.66 3.93
4530 6064 4.488879 CCTATATAACGGTTTAGGCGGTC 58.511 47.826 0.00 0.00 0.00 4.79
4537 6071 1.203052 CGGTTTAGGCGGTCTGAGTAA 59.797 52.381 0.00 0.00 0.00 2.24
4538 6072 2.734492 CGGTTTAGGCGGTCTGAGTAAG 60.734 54.545 0.00 0.00 0.00 2.34
4553 6087 0.887933 GTAAGACGTGGACCCGGTTA 59.112 55.000 0.00 2.69 0.00 2.85
4566 6100 4.746611 GGACCCGGTTATTGACTAAATACG 59.253 45.833 0.00 0.00 30.21 3.06
4569 6103 5.360714 ACCCGGTTATTGACTAAATACGAGA 59.639 40.000 0.00 0.00 30.21 4.04
4570 6104 5.689068 CCCGGTTATTGACTAAATACGAGAC 59.311 44.000 0.00 0.00 30.21 3.36
4571 6105 6.267817 CCGGTTATTGACTAAATACGAGACA 58.732 40.000 0.00 0.00 30.21 3.41
4582 6116 0.902984 TACGAGACACATGGCCTGGT 60.903 55.000 3.32 0.00 0.00 4.00
4610 6144 1.269413 ACCACGTCAGTTAAGTGACCG 60.269 52.381 29.23 25.50 43.45 4.79
4631 6165 0.851469 AGGACCCTCACGCCTCTATA 59.149 55.000 0.00 0.00 0.00 1.31
4648 6182 0.691078 ATATGTCCCGCACACTCCCT 60.691 55.000 0.00 0.00 38.04 4.20
4658 6195 0.038310 CACACTCCCTTCCCCTTTCC 59.962 60.000 0.00 0.00 0.00 3.13
4669 6206 0.694196 CCCCTTTCCGACAAACCCTA 59.306 55.000 0.00 0.00 0.00 3.53
4676 6213 3.967332 TCCGACAAACCCTAAACCTAG 57.033 47.619 0.00 0.00 0.00 3.02
4684 6221 3.399952 ACCCTAAACCTAGAGCTAGCA 57.600 47.619 18.83 0.00 31.95 3.49
4686 6223 2.036604 CCCTAAACCTAGAGCTAGCAGC 59.963 54.545 18.83 8.57 42.84 5.25
4713 6250 2.795329 GGTGATTCACTCATGGGTTGT 58.205 47.619 16.02 0.00 35.97 3.32
4757 6294 4.659480 GACAAAGGTGGCGACGTA 57.341 55.556 0.00 0.00 0.00 3.57
4761 6298 0.108329 CAAAGGTGGCGACGTATCCT 60.108 55.000 7.05 0.00 0.00 3.24
4762 6299 1.135527 CAAAGGTGGCGACGTATCCTA 59.864 52.381 7.05 0.00 0.00 2.94
4768 6305 1.370172 GCGACGTATCCTAGTGGCG 60.370 63.158 0.00 0.00 32.89 5.69
4780 6317 0.179094 TAGTGGCGATTTAGGCGTGG 60.179 55.000 0.00 0.00 39.82 4.94
4830 6367 1.740296 CAACTACGCCCTTCCCACG 60.740 63.158 0.00 0.00 0.00 4.94
4834 6371 2.558554 CTACGCCCTTCCCACGAGTG 62.559 65.000 0.00 0.00 0.00 3.51
4836 6373 2.266055 GCCCTTCCCACGAGTGAG 59.734 66.667 4.59 0.00 0.00 3.51
4837 6374 2.266055 CCCTTCCCACGAGTGAGC 59.734 66.667 4.59 0.00 0.00 4.26
4840 6377 0.951040 CCTTCCCACGAGTGAGCAAC 60.951 60.000 4.59 0.00 0.00 4.17
4842 6379 0.179234 TTCCCACGAGTGAGCAACAA 59.821 50.000 4.59 0.00 0.00 2.83
4919 6457 4.695928 GGAGTAAGGAAAGTCCACACATTC 59.304 45.833 0.00 0.00 39.61 2.67
4941 6479 6.405278 TCAGTGTTTGTCTCTCTTGTATGA 57.595 37.500 0.00 0.00 0.00 2.15
4964 6502 6.152831 TGAATATAGGGTAGTCACATGGATCG 59.847 42.308 0.00 0.00 0.00 3.69
4980 6518 2.338500 GATCGTGGAGAGGTGTTGTTC 58.662 52.381 0.00 0.00 0.00 3.18
4985 6523 3.432252 CGTGGAGAGGTGTTGTTCATTAC 59.568 47.826 0.00 0.00 0.00 1.89
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.316308 GCATCCATACATGTGGGAGTTTC 59.684 47.826 21.16 9.99 39.80 2.78
35 38 5.088680 ACAAAATGAAATTCCGCATCCAT 57.911 34.783 0.00 0.00 33.67 3.41
111 114 7.203255 AGAAACTTACGAAAAGGAGGAAATG 57.797 36.000 0.00 0.00 0.00 2.32
125 128 7.521509 ACGGAATCTGAAATAGAAACTTACG 57.478 36.000 0.00 0.00 39.30 3.18
172 175 6.316390 GGAATCTTCCTATTGTGTTGACGAAT 59.684 38.462 1.57 0.00 44.11 3.34
178 182 3.941483 AGCGGAATCTTCCTATTGTGTTG 59.059 43.478 7.35 0.00 45.33 3.33
186 190 4.080582 TCAAAATGGAGCGGAATCTTCCTA 60.081 41.667 7.35 0.00 45.33 2.94
212 216 2.120909 GCGCCACCATGCCTACAAT 61.121 57.895 0.00 0.00 0.00 2.71
334 374 2.546795 GCGGTTATCTGGTCTGATCCTG 60.547 54.545 0.00 0.00 0.00 3.86
340 380 0.105039 GAGGGCGGTTATCTGGTCTG 59.895 60.000 0.00 0.00 0.00 3.51
364 404 1.206371 AGGGGAAGCATGTACGTGTAC 59.794 52.381 16.28 3.21 36.63 2.90
486 526 4.397348 GACCAAGATTGTGGGCGT 57.603 55.556 0.00 0.00 43.56 5.68
488 528 0.958822 AAACGACCAAGATTGTGGGC 59.041 50.000 0.00 0.00 44.10 5.36
489 529 2.484264 GAGAAACGACCAAGATTGTGGG 59.516 50.000 0.00 0.00 43.56 4.61
490 530 2.157668 CGAGAAACGACCAAGATTGTGG 59.842 50.000 0.00 0.00 45.77 4.17
491 531 2.800544 ACGAGAAACGACCAAGATTGTG 59.199 45.455 0.00 0.00 45.77 3.33
492 532 3.107642 ACGAGAAACGACCAAGATTGT 57.892 42.857 0.00 0.00 45.77 2.71
493 533 3.985279 TGTACGAGAAACGACCAAGATTG 59.015 43.478 0.00 0.00 45.77 2.67
494 534 3.985925 GTGTACGAGAAACGACCAAGATT 59.014 43.478 0.00 0.00 45.77 2.40
511 594 3.193263 CTGTGCAGATCAGGATGTGTAC 58.807 50.000 16.87 16.87 44.08 2.90
513 596 1.627329 ACTGTGCAGATCAGGATGTGT 59.373 47.619 6.17 0.00 37.25 3.72
527 610 2.287427 GCATGGCATGAGATAACTGTGC 60.287 50.000 30.69 8.63 35.20 4.57
635 718 7.123997 TGAAATGATTGCAGGCTTTCCTTATTA 59.876 33.333 9.29 0.00 41.93 0.98
636 719 5.945144 AATGATTGCAGGCTTTCCTTATT 57.055 34.783 0.00 0.00 41.93 1.40
637 720 5.422970 TGAAATGATTGCAGGCTTTCCTTAT 59.577 36.000 9.29 0.00 41.93 1.73
677 760 4.768968 AGATGAACAAGCTTACTTTGGCAT 59.231 37.500 0.00 0.00 32.29 4.40
846 937 2.795331 GCTAGCTCGCGTTATATAGGCC 60.795 54.545 7.70 0.00 34.15 5.19
885 976 2.428890 TCTTTTGTTGCGGATGGTTTGT 59.571 40.909 0.00 0.00 0.00 2.83
888 979 6.959639 ATATATCTTTTGTTGCGGATGGTT 57.040 33.333 0.00 0.00 0.00 3.67
936 1027 3.181967 CTGCTGTGGCTACGTCGC 61.182 66.667 2.96 2.96 39.59 5.19
975 1066 7.309920 TGCCTACGTATGTATGTATGTATGTG 58.690 38.462 0.00 0.00 0.00 3.21
1131 1230 2.368594 CCCTCTGCTACTCCCCCA 59.631 66.667 0.00 0.00 0.00 4.96
1142 1241 4.148825 CGCGGACCTTCCCCTCTG 62.149 72.222 0.00 0.00 31.13 3.35
1306 1405 4.925576 GATGACCGTCGCGCCGAT 62.926 66.667 12.69 0.00 38.42 4.18
1371 1473 2.440796 CTGTAGACGCCGGGGGTA 60.441 66.667 23.83 10.98 0.00 3.69
1477 1618 6.151663 TGGCGTGTAATTACTATGCTCTAA 57.848 37.500 16.33 5.69 0.00 2.10
1487 1628 5.986004 AGCTATCTTTGGCGTGTAATTAC 57.014 39.130 8.75 8.75 33.93 1.89
1541 1686 1.346538 GAAACGCTCTCGCATCAGC 59.653 57.895 0.00 0.00 39.84 4.26
1598 1743 7.040686 ACAGGTTGATTCGCACTATAACTTTTT 60.041 33.333 0.00 0.00 0.00 1.94
1599 1744 6.430000 ACAGGTTGATTCGCACTATAACTTTT 59.570 34.615 0.00 0.00 0.00 2.27
1600 1745 5.938125 ACAGGTTGATTCGCACTATAACTTT 59.062 36.000 0.00 0.00 0.00 2.66
1601 1746 5.351465 CACAGGTTGATTCGCACTATAACTT 59.649 40.000 0.00 0.00 0.00 2.66
1602 1747 4.870426 CACAGGTTGATTCGCACTATAACT 59.130 41.667 0.00 0.00 0.00 2.24
1603 1748 4.034048 CCACAGGTTGATTCGCACTATAAC 59.966 45.833 0.00 0.00 0.00 1.89
1604 1749 4.188462 CCACAGGTTGATTCGCACTATAA 58.812 43.478 0.00 0.00 0.00 0.98
1605 1750 3.196901 ACCACAGGTTGATTCGCACTATA 59.803 43.478 0.00 0.00 27.29 1.31
1606 1751 2.027192 ACCACAGGTTGATTCGCACTAT 60.027 45.455 0.00 0.00 27.29 2.12
1607 1752 1.346395 ACCACAGGTTGATTCGCACTA 59.654 47.619 0.00 0.00 27.29 2.74
1608 1753 0.108585 ACCACAGGTTGATTCGCACT 59.891 50.000 0.00 0.00 27.29 4.40
1609 1754 0.951558 AACCACAGGTTGATTCGCAC 59.048 50.000 0.00 0.00 45.07 5.34
1610 1755 3.412722 AACCACAGGTTGATTCGCA 57.587 47.368 0.00 0.00 45.07 5.10
1619 1764 2.158667 CCTAACCAACTCAACCACAGGT 60.159 50.000 0.00 0.00 37.65 4.00
1620 1765 2.158667 ACCTAACCAACTCAACCACAGG 60.159 50.000 0.00 0.00 0.00 4.00
1621 1766 2.878406 CACCTAACCAACTCAACCACAG 59.122 50.000 0.00 0.00 0.00 3.66
1622 1767 2.422235 CCACCTAACCAACTCAACCACA 60.422 50.000 0.00 0.00 0.00 4.17
1623 1768 2.158726 TCCACCTAACCAACTCAACCAC 60.159 50.000 0.00 0.00 0.00 4.16
1624 1769 2.128535 TCCACCTAACCAACTCAACCA 58.871 47.619 0.00 0.00 0.00 3.67
1625 1770 2.158726 TGTCCACCTAACCAACTCAACC 60.159 50.000 0.00 0.00 0.00 3.77
1626 1771 3.139077 CTGTCCACCTAACCAACTCAAC 58.861 50.000 0.00 0.00 0.00 3.18
1627 1772 2.775384 ACTGTCCACCTAACCAACTCAA 59.225 45.455 0.00 0.00 0.00 3.02
1628 1773 2.104111 CACTGTCCACCTAACCAACTCA 59.896 50.000 0.00 0.00 0.00 3.41
1629 1774 2.550208 CCACTGTCCACCTAACCAACTC 60.550 54.545 0.00 0.00 0.00 3.01
1630 1775 1.420138 CCACTGTCCACCTAACCAACT 59.580 52.381 0.00 0.00 0.00 3.16
1631 1776 1.142262 ACCACTGTCCACCTAACCAAC 59.858 52.381 0.00 0.00 0.00 3.77
1632 1777 1.513858 ACCACTGTCCACCTAACCAA 58.486 50.000 0.00 0.00 0.00 3.67
1633 1778 2.402182 TACCACTGTCCACCTAACCA 57.598 50.000 0.00 0.00 0.00 3.67
1634 1779 2.169978 GGATACCACTGTCCACCTAACC 59.830 54.545 0.00 0.00 34.57 2.85
1635 1780 3.538634 GGATACCACTGTCCACCTAAC 57.461 52.381 0.00 0.00 34.57 2.34
1650 1795 0.917333 TCCTGGTGGGTTGGGGATAC 60.917 60.000 0.00 0.00 36.25 2.24
1651 1796 0.047176 ATCCTGGTGGGTTGGGGATA 59.953 55.000 0.00 0.00 35.34 2.59
1652 1797 0.855400 AATCCTGGTGGGTTGGGGAT 60.855 55.000 0.00 0.00 34.88 3.85
1653 1798 1.467190 AATCCTGGTGGGTTGGGGA 60.467 57.895 0.00 0.00 34.88 4.81
1654 1799 1.000359 GAATCCTGGTGGGTTGGGG 60.000 63.158 0.00 0.00 36.67 4.96
1655 1800 0.114168 TTGAATCCTGGTGGGTTGGG 59.886 55.000 0.00 0.00 36.67 4.12
1656 1801 2.008242 TTTGAATCCTGGTGGGTTGG 57.992 50.000 0.00 0.00 36.67 3.77
1657 1802 3.874392 GATTTGAATCCTGGTGGGTTG 57.126 47.619 0.00 0.00 36.67 3.77
1668 1813 1.064654 GCGAGCACCAGGATTTGAATC 59.935 52.381 0.00 0.00 34.66 2.52
1669 1814 1.098050 GCGAGCACCAGGATTTGAAT 58.902 50.000 0.00 0.00 0.00 2.57
1670 1815 0.250684 TGCGAGCACCAGGATTTGAA 60.251 50.000 0.00 0.00 0.00 2.69
1671 1816 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.000 0.00 0.00 0.00 2.69
1672 1817 0.813184 AATGCGAGCACCAGGATTTG 59.187 50.000 0.00 0.00 0.00 2.32
1673 1818 2.418368 TAATGCGAGCACCAGGATTT 57.582 45.000 0.00 0.00 31.11 2.17
1674 1819 2.645838 ATAATGCGAGCACCAGGATT 57.354 45.000 0.00 0.00 33.17 3.01
1675 1820 2.498167 GAATAATGCGAGCACCAGGAT 58.502 47.619 0.00 0.00 0.00 3.24
1676 1821 1.475034 GGAATAATGCGAGCACCAGGA 60.475 52.381 0.00 0.00 0.00 3.86
1677 1822 0.947244 GGAATAATGCGAGCACCAGG 59.053 55.000 0.00 0.00 0.00 4.45
1678 1823 1.600957 CAGGAATAATGCGAGCACCAG 59.399 52.381 0.00 0.00 0.00 4.00
1679 1824 1.667236 CAGGAATAATGCGAGCACCA 58.333 50.000 0.00 0.00 0.00 4.17
1680 1825 0.947244 CCAGGAATAATGCGAGCACC 59.053 55.000 0.00 0.00 0.00 5.01
1681 1826 1.953559 TCCAGGAATAATGCGAGCAC 58.046 50.000 0.00 0.00 0.00 4.40
1682 1827 2.936919 ATCCAGGAATAATGCGAGCA 57.063 45.000 0.00 0.00 0.00 4.26
1683 1828 5.886960 ATAAATCCAGGAATAATGCGAGC 57.113 39.130 0.00 0.00 0.00 5.03
1684 1829 7.874940 TGAAATAAATCCAGGAATAATGCGAG 58.125 34.615 0.00 0.00 0.00 5.03
1685 1830 7.815840 TGAAATAAATCCAGGAATAATGCGA 57.184 32.000 0.00 0.00 0.00 5.10
1695 1840 5.010012 CCGGAAATCCTGAAATAAATCCAGG 59.990 44.000 0.00 0.00 46.64 4.45
1696 1841 5.507985 GCCGGAAATCCTGAAATAAATCCAG 60.508 44.000 5.05 0.00 0.00 3.86
1697 1842 4.340950 GCCGGAAATCCTGAAATAAATCCA 59.659 41.667 5.05 0.00 0.00 3.41
1698 1843 4.556699 CGCCGGAAATCCTGAAATAAATCC 60.557 45.833 5.05 0.00 0.00 3.01
1699 1844 4.274950 TCGCCGGAAATCCTGAAATAAATC 59.725 41.667 5.05 0.00 0.00 2.17
1700 1845 4.204012 TCGCCGGAAATCCTGAAATAAAT 58.796 39.130 5.05 0.00 0.00 1.40
1701 1846 3.611970 TCGCCGGAAATCCTGAAATAAA 58.388 40.909 5.05 0.00 0.00 1.40
1702 1847 3.269538 TCGCCGGAAATCCTGAAATAA 57.730 42.857 5.05 0.00 0.00 1.40
1703 1848 2.992124 TCGCCGGAAATCCTGAAATA 57.008 45.000 5.05 0.00 0.00 1.40
1704 1849 1.949525 CATCGCCGGAAATCCTGAAAT 59.050 47.619 5.05 0.00 0.00 2.17
1705 1850 1.378531 CATCGCCGGAAATCCTGAAA 58.621 50.000 5.05 0.00 0.00 2.69
1706 1851 1.095228 GCATCGCCGGAAATCCTGAA 61.095 55.000 5.05 0.00 0.00 3.02
1707 1852 1.523711 GCATCGCCGGAAATCCTGA 60.524 57.895 5.05 0.00 0.00 3.86
1708 1853 2.885676 CGCATCGCCGGAAATCCTG 61.886 63.158 5.05 0.00 0.00 3.86
1709 1854 2.588877 CGCATCGCCGGAAATCCT 60.589 61.111 5.05 0.00 0.00 3.24
1720 1865 1.699656 CTCCCACTGAAAGCGCATCG 61.700 60.000 11.47 6.82 37.60 3.84
1721 1866 1.372087 CCTCCCACTGAAAGCGCATC 61.372 60.000 11.47 8.39 37.60 3.91
1722 1867 1.377725 CCTCCCACTGAAAGCGCAT 60.378 57.895 11.47 0.00 37.60 4.73
1723 1868 2.032528 CCTCCCACTGAAAGCGCA 59.967 61.111 11.47 0.00 37.60 6.09
1724 1869 1.743252 CTCCTCCCACTGAAAGCGC 60.743 63.158 0.00 0.00 37.60 5.92
1725 1870 0.390472 GTCTCCTCCCACTGAAAGCG 60.390 60.000 0.00 0.00 37.60 4.68
1726 1871 0.390472 CGTCTCCTCCCACTGAAAGC 60.390 60.000 0.00 0.00 37.60 3.51
1727 1872 0.969894 ACGTCTCCTCCCACTGAAAG 59.030 55.000 0.00 0.00 42.29 2.62
1728 1873 1.343465 GAACGTCTCCTCCCACTGAAA 59.657 52.381 0.00 0.00 0.00 2.69
1729 1874 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
1730 1875 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
1731 1876 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
1732 1877 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
1753 1898 3.950254 ATAGGCGCCTCGTCGTCG 61.950 66.667 36.73 0.00 39.34 5.12
1754 1899 2.353607 CATAGGCGCCTCGTCGTC 60.354 66.667 36.73 0.00 36.23 4.20
1755 1900 3.900892 CCATAGGCGCCTCGTCGT 61.901 66.667 36.73 11.27 36.23 4.34
1756 1901 3.900892 ACCATAGGCGCCTCGTCG 61.901 66.667 36.73 21.01 36.23 5.12
1757 1902 2.279517 CACCATAGGCGCCTCGTC 60.280 66.667 36.73 1.08 0.00 4.20
1758 1903 2.758327 TCACCATAGGCGCCTCGT 60.758 61.111 36.73 24.45 0.00 4.18
1759 1904 2.279517 GTCACCATAGGCGCCTCG 60.280 66.667 36.73 25.26 0.00 4.63
1760 1905 0.530870 GAAGTCACCATAGGCGCCTC 60.531 60.000 36.73 17.40 0.00 4.70
1761 1906 1.522569 GAAGTCACCATAGGCGCCT 59.477 57.895 34.85 34.85 0.00 5.52
1762 1907 1.883084 CGAAGTCACCATAGGCGCC 60.883 63.158 21.89 21.89 0.00 6.53
1763 1908 0.101759 TACGAAGTCACCATAGGCGC 59.898 55.000 0.00 0.00 43.93 6.53
1764 1909 2.572191 TTACGAAGTCACCATAGGCG 57.428 50.000 0.00 0.00 43.93 5.52
1765 1910 4.694339 AGATTTACGAAGTCACCATAGGC 58.306 43.478 0.00 0.00 43.93 3.93
1766 1911 5.902681 TGAGATTTACGAAGTCACCATAGG 58.097 41.667 0.00 0.00 43.93 2.57
1767 1912 7.258441 TCTTGAGATTTACGAAGTCACCATAG 58.742 38.462 0.00 0.00 43.93 2.23
1768 1913 7.165460 TCTTGAGATTTACGAAGTCACCATA 57.835 36.000 0.00 0.00 43.93 2.74
1769 1914 6.037786 TCTTGAGATTTACGAAGTCACCAT 57.962 37.500 0.00 0.00 43.93 3.55
1770 1915 5.462530 TCTTGAGATTTACGAAGTCACCA 57.537 39.130 0.00 0.00 43.93 4.17
1771 1916 6.100004 TCATCTTGAGATTTACGAAGTCACC 58.900 40.000 0.00 0.00 35.39 4.02
1772 1917 7.763172 ATCATCTTGAGATTTACGAAGTCAC 57.237 36.000 0.00 0.00 35.39 3.67
1773 1918 9.468532 CATATCATCTTGAGATTTACGAAGTCA 57.531 33.333 0.00 0.00 35.39 3.41
1774 1919 8.431593 GCATATCATCTTGAGATTTACGAAGTC 58.568 37.037 0.00 0.00 35.39 3.01
1775 1920 7.386299 GGCATATCATCTTGAGATTTACGAAGT 59.614 37.037 0.00 0.00 37.29 3.01
1776 1921 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
1777 1922 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
1778 1923 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
1779 1924 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
1780 1925 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
1781 1926 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
1782 1927 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
1783 1928 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
1784 1929 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
1785 1930 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
1786 1931 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
1787 1932 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
1788 1933 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
1789 1934 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
1790 1935 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
1791 1936 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
1792 1937 1.274728 GAGACTGAGCCGGCATATCAT 59.725 52.381 31.54 13.17 0.00 2.45
1793 1938 0.676184 GAGACTGAGCCGGCATATCA 59.324 55.000 31.54 22.44 0.00 2.15
1794 1939 0.965439 AGAGACTGAGCCGGCATATC 59.035 55.000 31.54 18.63 0.00 1.63
1795 1940 0.965439 GAGAGACTGAGCCGGCATAT 59.035 55.000 31.54 8.11 0.00 1.78
1796 1941 1.448119 CGAGAGACTGAGCCGGCATA 61.448 60.000 31.54 16.21 0.00 3.14
1797 1942 2.780094 CGAGAGACTGAGCCGGCAT 61.780 63.158 31.54 14.28 0.00 4.40
1798 1943 3.443925 CGAGAGACTGAGCCGGCA 61.444 66.667 31.54 7.98 0.00 5.69
1799 1944 4.200283 CCGAGAGACTGAGCCGGC 62.200 72.222 21.89 21.89 33.47 6.13
1800 1945 2.438614 TCCGAGAGACTGAGCCGG 60.439 66.667 0.00 0.00 41.36 6.13
1801 1946 2.477176 CCTCCGAGAGACTGAGCCG 61.477 68.421 0.00 0.00 0.00 5.52
1802 1947 1.379309 ACCTCCGAGAGACTGAGCC 60.379 63.158 0.00 0.00 0.00 4.70
1803 1948 1.806568 CACCTCCGAGAGACTGAGC 59.193 63.158 0.00 0.00 0.00 4.26
1804 1949 0.679640 AGCACCTCCGAGAGACTGAG 60.680 60.000 0.00 0.00 0.00 3.35
1805 1950 0.678366 GAGCACCTCCGAGAGACTGA 60.678 60.000 0.00 0.00 0.00 3.41
1806 1951 0.962855 TGAGCACCTCCGAGAGACTG 60.963 60.000 0.00 0.22 0.00 3.51
1807 1952 0.033601 ATGAGCACCTCCGAGAGACT 60.034 55.000 0.00 0.00 0.00 3.24
1808 1953 1.606668 CTATGAGCACCTCCGAGAGAC 59.393 57.143 0.00 0.00 0.00 3.36
1809 1954 1.477740 CCTATGAGCACCTCCGAGAGA 60.478 57.143 0.00 0.00 0.00 3.10
1810 1955 0.958091 CCTATGAGCACCTCCGAGAG 59.042 60.000 0.00 0.00 0.00 3.20
1811 1956 0.468214 CCCTATGAGCACCTCCGAGA 60.468 60.000 0.00 0.00 0.00 4.04
1812 1957 1.467678 CCCCTATGAGCACCTCCGAG 61.468 65.000 0.00 0.00 0.00 4.63
1813 1958 1.457643 CCCCTATGAGCACCTCCGA 60.458 63.158 0.00 0.00 0.00 4.55
1814 1959 0.469331 TACCCCTATGAGCACCTCCG 60.469 60.000 0.00 0.00 0.00 4.63
1815 1960 1.343069 CTACCCCTATGAGCACCTCC 58.657 60.000 0.00 0.00 0.00 4.30
1816 1961 1.343069 CCTACCCCTATGAGCACCTC 58.657 60.000 0.00 0.00 0.00 3.85
1817 1962 0.104934 CCCTACCCCTATGAGCACCT 60.105 60.000 0.00 0.00 0.00 4.00
1818 1963 0.400093 ACCCTACCCCTATGAGCACC 60.400 60.000 0.00 0.00 0.00 5.01
1819 1964 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
1820 1965 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
1821 1966 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
1822 1967 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
1823 1968 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
1824 1969 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
1825 1970 1.002533 ACGCACACCCTACCCCTAT 59.997 57.895 0.00 0.00 0.00 2.57
1826 1971 1.985662 CACGCACACCCTACCCCTA 60.986 63.158 0.00 0.00 0.00 3.53
1827 1972 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
1828 1973 3.633116 ACACGCACACCCTACCCC 61.633 66.667 0.00 0.00 0.00 4.95
1829 1974 2.358247 CACACGCACACCCTACCC 60.358 66.667 0.00 0.00 0.00 3.69
1830 1975 1.959226 CACACACGCACACCCTACC 60.959 63.158 0.00 0.00 0.00 3.18
1831 1976 2.604174 GCACACACGCACACCCTAC 61.604 63.158 0.00 0.00 0.00 3.18
1832 1977 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
1835 1980 3.783588 GAACGCACACACGCACACC 62.784 63.158 0.00 0.00 36.19 4.16
1836 1981 2.350760 GAACGCACACACGCACAC 60.351 61.111 0.00 0.00 36.19 3.82
1837 1982 0.876342 TATGAACGCACACACGCACA 60.876 50.000 0.00 0.00 36.19 4.57
1838 1983 0.179250 CTATGAACGCACACACGCAC 60.179 55.000 0.00 0.00 36.19 5.34
1839 1984 1.288419 CCTATGAACGCACACACGCA 61.288 55.000 0.00 0.00 36.19 5.24
1840 1985 1.419922 CCTATGAACGCACACACGC 59.580 57.895 0.00 0.00 36.19 5.34
1841 1986 0.389296 TCCCTATGAACGCACACACG 60.389 55.000 0.00 0.00 39.50 4.49
1842 1987 1.665679 CATCCCTATGAACGCACACAC 59.334 52.381 0.00 0.00 34.84 3.82
1843 1988 1.552792 TCATCCCTATGAACGCACACA 59.447 47.619 0.00 0.00 39.20 3.72
1844 1989 2.205074 CTCATCCCTATGAACGCACAC 58.795 52.381 0.00 0.00 41.57 3.82
1845 1990 1.831106 ACTCATCCCTATGAACGCACA 59.169 47.619 0.00 0.00 41.57 4.57
1846 1991 2.205074 CACTCATCCCTATGAACGCAC 58.795 52.381 0.00 0.00 41.57 5.34
1847 1992 1.831106 ACACTCATCCCTATGAACGCA 59.169 47.619 0.00 0.00 41.57 5.24
1848 1993 2.604046 ACACTCATCCCTATGAACGC 57.396 50.000 0.00 0.00 41.57 4.84
1849 1994 3.990469 GCATACACTCATCCCTATGAACG 59.010 47.826 0.00 0.00 41.57 3.95
1850 1995 3.990469 CGCATACACTCATCCCTATGAAC 59.010 47.826 0.00 0.00 41.57 3.18
1851 1996 3.554960 GCGCATACACTCATCCCTATGAA 60.555 47.826 0.30 0.00 41.57 2.57
1852 1997 2.029020 GCGCATACACTCATCCCTATGA 60.029 50.000 0.30 0.00 39.87 2.15
1853 1998 2.341257 GCGCATACACTCATCCCTATG 58.659 52.381 0.30 0.00 0.00 2.23
1854 1999 1.067565 CGCGCATACACTCATCCCTAT 60.068 52.381 8.75 0.00 0.00 2.57
1855 2000 0.313987 CGCGCATACACTCATCCCTA 59.686 55.000 8.75 0.00 0.00 3.53
1856 2001 1.068083 CGCGCATACACTCATCCCT 59.932 57.895 8.75 0.00 0.00 4.20
1857 2002 0.031585 TACGCGCATACACTCATCCC 59.968 55.000 5.73 0.00 0.00 3.85
1858 2003 2.065993 ATACGCGCATACACTCATCC 57.934 50.000 5.73 0.00 0.00 3.51
1859 2004 6.199393 TCATATATACGCGCATACACTCATC 58.801 40.000 5.73 0.00 0.00 2.92
1860 2005 6.131544 TCATATATACGCGCATACACTCAT 57.868 37.500 5.73 0.00 0.00 2.90
1861 2006 5.554822 TCATATATACGCGCATACACTCA 57.445 39.130 5.73 0.00 0.00 3.41
1862 2007 4.438145 GCTCATATATACGCGCATACACTC 59.562 45.833 5.73 0.00 0.00 3.51
1863 2008 4.352039 GCTCATATATACGCGCATACACT 58.648 43.478 5.73 0.00 0.00 3.55
1864 2009 3.177838 CGCTCATATATACGCGCATACAC 59.822 47.826 5.73 0.00 39.11 2.90
1865 2010 3.359654 CGCTCATATATACGCGCATACA 58.640 45.455 5.73 0.00 39.11 2.29
1873 2018 4.322009 CAGACACAAGCGCTCATATATACG 59.678 45.833 12.06 0.00 0.00 3.06
1874 2019 5.223382 ACAGACACAAGCGCTCATATATAC 58.777 41.667 12.06 0.00 0.00 1.47
1875 2020 5.453567 ACAGACACAAGCGCTCATATATA 57.546 39.130 12.06 0.00 0.00 0.86
1876 2021 4.327982 ACAGACACAAGCGCTCATATAT 57.672 40.909 12.06 0.00 0.00 0.86
1877 2022 3.801114 ACAGACACAAGCGCTCATATA 57.199 42.857 12.06 0.00 0.00 0.86
1878 2023 2.680312 ACAGACACAAGCGCTCATAT 57.320 45.000 12.06 0.00 0.00 1.78
1879 2024 2.492088 AGTACAGACACAAGCGCTCATA 59.508 45.455 12.06 0.00 0.00 2.15
1880 2025 1.273606 AGTACAGACACAAGCGCTCAT 59.726 47.619 12.06 0.00 0.00 2.90
1881 2026 0.673985 AGTACAGACACAAGCGCTCA 59.326 50.000 12.06 0.00 0.00 4.26
1882 2027 1.063806 CAGTACAGACACAAGCGCTC 58.936 55.000 12.06 0.00 0.00 5.03
1883 2028 0.673985 TCAGTACAGACACAAGCGCT 59.326 50.000 2.64 2.64 0.00 5.92
1884 2029 1.391485 CATCAGTACAGACACAAGCGC 59.609 52.381 0.00 0.00 0.00 5.92
1885 2030 1.391485 GCATCAGTACAGACACAAGCG 59.609 52.381 0.00 0.00 0.00 4.68
1886 2031 2.693069 AGCATCAGTACAGACACAAGC 58.307 47.619 0.00 0.00 0.00 4.01
1887 2032 6.785488 TTTTAGCATCAGTACAGACACAAG 57.215 37.500 0.00 0.00 0.00 3.16
1924 2069 7.571080 TCCAACCGTTGAACTATAACTTTTT 57.429 32.000 13.04 0.00 0.00 1.94
1925 2070 7.754851 ATCCAACCGTTGAACTATAACTTTT 57.245 32.000 13.04 0.00 0.00 2.27
1926 2071 8.316214 TCTATCCAACCGTTGAACTATAACTTT 58.684 33.333 13.04 0.00 0.00 2.66
1927 2072 7.844009 TCTATCCAACCGTTGAACTATAACTT 58.156 34.615 13.04 0.00 0.00 2.66
1928 2073 7.414222 TCTATCCAACCGTTGAACTATAACT 57.586 36.000 13.04 0.00 0.00 2.24
1929 2074 7.170998 CCATCTATCCAACCGTTGAACTATAAC 59.829 40.741 13.04 0.00 0.00 1.89
1930 2075 7.070198 TCCATCTATCCAACCGTTGAACTATAA 59.930 37.037 13.04 0.00 0.00 0.98
1931 2076 6.551975 TCCATCTATCCAACCGTTGAACTATA 59.448 38.462 13.04 4.64 0.00 1.31
1932 2077 5.365605 TCCATCTATCCAACCGTTGAACTAT 59.634 40.000 13.04 3.78 0.00 2.12
1933 2078 4.712829 TCCATCTATCCAACCGTTGAACTA 59.287 41.667 13.04 0.96 0.00 2.24
1934 2079 3.517901 TCCATCTATCCAACCGTTGAACT 59.482 43.478 13.04 0.00 0.00 3.01
1935 2080 3.621715 GTCCATCTATCCAACCGTTGAAC 59.378 47.826 13.04 0.00 0.00 3.18
1936 2081 3.262151 TGTCCATCTATCCAACCGTTGAA 59.738 43.478 13.04 0.00 0.00 2.69
1937 2082 2.835156 TGTCCATCTATCCAACCGTTGA 59.165 45.455 13.04 0.00 0.00 3.18
1938 2083 2.936498 GTGTCCATCTATCCAACCGTTG 59.064 50.000 4.12 4.12 0.00 4.10
1939 2084 2.418197 CGTGTCCATCTATCCAACCGTT 60.418 50.000 0.00 0.00 0.00 4.44
1946 2091 8.172352 AGATATATTAGCGTGTCCATCTATCC 57.828 38.462 0.00 0.00 0.00 2.59
1969 2114 7.769044 GGGACATGCAGTTATTAGTTAAGAAGA 59.231 37.037 0.00 0.00 0.00 2.87
1970 2115 7.012421 GGGGACATGCAGTTATTAGTTAAGAAG 59.988 40.741 0.00 0.00 0.00 2.85
1971 2116 6.826741 GGGGACATGCAGTTATTAGTTAAGAA 59.173 38.462 0.00 0.00 0.00 2.52
1974 2119 6.069905 TGAGGGGACATGCAGTTATTAGTTAA 60.070 38.462 0.00 0.00 0.00 2.01
1975 2120 5.427157 TGAGGGGACATGCAGTTATTAGTTA 59.573 40.000 0.00 0.00 0.00 2.24
1976 2121 4.227300 TGAGGGGACATGCAGTTATTAGTT 59.773 41.667 0.00 0.00 0.00 2.24
1977 2122 3.780294 TGAGGGGACATGCAGTTATTAGT 59.220 43.478 0.00 0.00 0.00 2.24
1979 2124 4.853468 TTGAGGGGACATGCAGTTATTA 57.147 40.909 0.00 0.00 0.00 0.98
1982 2127 3.517296 TTTTGAGGGGACATGCAGTTA 57.483 42.857 0.00 0.00 0.00 2.24
1984 2129 2.380064 TTTTTGAGGGGACATGCAGT 57.620 45.000 0.00 0.00 0.00 4.40
2006 2151 9.593134 TTTGACAACATGCAGTTATTAGTTTTT 57.407 25.926 0.00 0.00 38.74 1.94
2007 2152 9.593134 TTTTGACAACATGCAGTTATTAGTTTT 57.407 25.926 0.00 0.00 38.74 2.43
2008 2153 9.593134 TTTTTGACAACATGCAGTTATTAGTTT 57.407 25.926 0.00 0.00 38.74 2.66
2056 2209 8.954950 AAATGATGTGGTTATTTCACACAAAA 57.045 26.923 0.00 0.00 46.74 2.44
2057 2210 7.655328 GGAAATGATGTGGTTATTTCACACAAA 59.345 33.333 0.00 0.00 46.74 2.83
2058 2211 7.151308 GGAAATGATGTGGTTATTTCACACAA 58.849 34.615 0.00 0.00 46.74 3.33
2059 2212 6.295011 GGGAAATGATGTGGTTATTTCACACA 60.295 38.462 0.00 0.00 46.19 3.72
2060 2213 6.071391 AGGGAAATGATGTGGTTATTTCACAC 60.071 38.462 12.12 0.00 44.45 3.82
2061 2214 6.015918 AGGGAAATGATGTGGTTATTTCACA 58.984 36.000 12.12 0.00 44.45 3.58
2062 2215 6.530019 AGGGAAATGATGTGGTTATTTCAC 57.470 37.500 0.00 0.00 43.13 3.18
2063 2216 7.552050 AAAGGGAAATGATGTGGTTATTTCA 57.448 32.000 0.00 0.00 41.89 2.69
2064 2217 8.846943 AAAAAGGGAAATGATGTGGTTATTTC 57.153 30.769 0.00 0.00 40.32 2.17
2088 2241 5.841237 TGATGTGGTTATTTCCCTCCAAAAA 59.159 36.000 0.00 0.00 0.00 1.94
2089 2242 5.398236 TGATGTGGTTATTTCCCTCCAAAA 58.602 37.500 0.00 0.00 0.00 2.44
2090 2243 5.004361 TGATGTGGTTATTTCCCTCCAAA 57.996 39.130 0.00 0.00 0.00 3.28
2091 2244 4.666412 TGATGTGGTTATTTCCCTCCAA 57.334 40.909 0.00 0.00 0.00 3.53
2092 2245 4.879295 ATGATGTGGTTATTTCCCTCCA 57.121 40.909 0.00 0.00 0.00 3.86
2093 2246 6.149129 GAAATGATGTGGTTATTTCCCTCC 57.851 41.667 0.00 0.00 37.02 4.30
2122 2275 6.985653 TGATGTGGTTATTTCCCTCAAAAA 57.014 33.333 0.00 0.00 0.00 1.94
2123 2276 7.552050 AATGATGTGGTTATTTCCCTCAAAA 57.448 32.000 0.00 0.00 0.00 2.44
2124 2277 7.234371 TGAAATGATGTGGTTATTTCCCTCAAA 59.766 33.333 0.00 0.00 40.33 2.69
2125 2278 6.723515 TGAAATGATGTGGTTATTTCCCTCAA 59.276 34.615 0.00 0.00 40.33 3.02
2126 2279 6.252233 TGAAATGATGTGGTTATTTCCCTCA 58.748 36.000 0.00 0.00 40.33 3.86
2127 2280 6.773976 TGAAATGATGTGGTTATTTCCCTC 57.226 37.500 0.00 0.00 40.33 4.30
2128 2281 7.552050 TTTGAAATGATGTGGTTATTTCCCT 57.448 32.000 0.00 0.00 40.33 4.20
2129 2282 8.791327 ATTTTGAAATGATGTGGTTATTTCCC 57.209 30.769 0.00 0.00 40.33 3.97
2207 2888 8.966069 AGAGAAAAGATTAATTAGCAGTACCC 57.034 34.615 0.00 0.00 0.00 3.69
2418 3576 2.251818 TCATGAATTCCCCCGCAAAAA 58.748 42.857 2.27 0.00 0.00 1.94
2419 3577 1.930251 TCATGAATTCCCCCGCAAAA 58.070 45.000 2.27 0.00 0.00 2.44
2421 3579 1.064091 TCATCATGAATTCCCCCGCAA 60.064 47.619 0.00 0.00 0.00 4.85
2422 3580 0.550432 TCATCATGAATTCCCCCGCA 59.450 50.000 0.00 0.00 0.00 5.69
2423 3581 1.338020 GTTCATCATGAATTCCCCCGC 59.662 52.381 2.67 0.00 38.79 6.13
2425 3583 6.729690 TTAATGTTCATCATGAATTCCCCC 57.270 37.500 2.67 0.00 38.79 5.40
2426 3584 9.696917 GTTATTAATGTTCATCATGAATTCCCC 57.303 33.333 2.67 0.00 38.79 4.81
2477 3700 7.349598 AGGGTTAATCAAAACAGATATGCTCT 58.650 34.615 0.00 0.00 33.14 4.09
2623 3909 0.388649 CCACTGCACGTACTGTCTCC 60.389 60.000 0.00 0.00 0.00 3.71
2645 3931 0.770557 AGTTGTGGCCCTGGTCCTTA 60.771 55.000 0.00 0.00 0.00 2.69
2648 3934 1.903404 CAAGTTGTGGCCCTGGTCC 60.903 63.158 0.00 0.00 0.00 4.46
2664 3950 4.047059 GTCGTCGTCGGAGCCCAA 62.047 66.667 1.55 0.00 37.69 4.12
2786 4075 4.743644 GCACGCGATTAGTTTATTCTAGGT 59.256 41.667 15.93 0.00 0.00 3.08
2928 4269 2.359040 CGCGCGAGTTAACGACACA 61.359 57.895 28.94 0.00 35.09 3.72
2943 4292 0.317938 GCTCTCCACATAGGTACGCG 60.318 60.000 3.53 3.53 39.02 6.01
2945 4294 2.292016 CTCTGCTCTCCACATAGGTACG 59.708 54.545 0.00 0.00 39.02 3.67
2950 4299 1.686052 GACCCTCTGCTCTCCACATAG 59.314 57.143 0.00 0.00 0.00 2.23
2952 4301 0.980231 GGACCCTCTGCTCTCCACAT 60.980 60.000 0.00 0.00 0.00 3.21
2997 4346 1.287815 CTCGTCCTTGTACGCCACA 59.712 57.895 0.00 0.00 42.56 4.17
3184 4668 2.427410 GTTGAACCGCTTGCGCTG 60.427 61.111 9.73 2.28 0.00 5.18
3253 4740 4.047059 GGCGAAGTCGACGGTGGA 62.047 66.667 10.46 0.00 43.02 4.02
3322 4821 4.707934 TCGGGAGAAATTAATGGGAAAACC 59.292 41.667 0.00 0.00 36.07 3.27
3323 4822 5.907866 TCGGGAGAAATTAATGGGAAAAC 57.092 39.130 0.00 0.00 34.75 2.43
3717 5236 0.674534 GTGATTCCGCCGATCCTAGT 59.325 55.000 0.00 0.00 0.00 2.57
3757 5276 2.008268 GCACACCCATGGCTGCATAC 62.008 60.000 17.87 0.00 32.04 2.39
3764 5293 2.894919 GGAATGCACACCCATGGC 59.105 61.111 6.09 0.00 0.00 4.40
3843 5372 3.245284 CGATTGCAACTATCCTAACACGG 59.755 47.826 0.00 0.00 0.00 4.94
3872 5401 7.609760 ATTTGTGAGCAATCTTGACGTAATA 57.390 32.000 0.00 0.00 34.18 0.98
3873 5402 5.940192 TTTGTGAGCAATCTTGACGTAAT 57.060 34.783 0.00 0.00 34.18 1.89
3874 5403 5.940192 ATTTGTGAGCAATCTTGACGTAA 57.060 34.783 0.00 0.00 34.18 3.18
3903 5435 2.073117 TGCCACGTACTACATGTGTG 57.927 50.000 9.11 7.44 41.82 3.82
3928 5460 3.027787 ATGGGGGCCTCCATTTCC 58.972 61.111 33.03 7.46 44.55 3.13
3998 5530 6.652205 AGATGAAACCTATGGGTCCTTTAA 57.348 37.500 0.00 0.00 46.67 1.52
4037 5569 0.395312 GAAGTTGGACGAAGGGGTGA 59.605 55.000 0.00 0.00 0.00 4.02
4059 5591 1.200519 AGAACGGGATGGGAAATCGA 58.799 50.000 0.00 0.00 0.00 3.59
4061 5593 2.104963 AGCTAGAACGGGATGGGAAATC 59.895 50.000 0.00 0.00 0.00 2.17
4111 5643 9.917129 TTTGTCTACGTATCAGAAGTTTATTCA 57.083 29.630 0.00 0.00 0.00 2.57
4149 5681 6.884280 GGGGTTACCAAAGATCAGATATTG 57.116 41.667 2.98 0.00 39.85 1.90
4178 5710 0.324614 TGTGCCCGTGATTGATCTGT 59.675 50.000 0.00 0.00 0.00 3.41
4270 5802 4.026804 CACAATAAGACGACCATACGAAGC 60.027 45.833 0.00 0.00 37.03 3.86
4357 5891 2.401351 GAGTGTGTTTCTACCACCGTC 58.599 52.381 0.00 0.00 31.71 4.79
4358 5892 1.069668 GGAGTGTGTTTCTACCACCGT 59.930 52.381 0.00 0.00 31.71 4.83
4396 5930 6.544928 AAGGATGAAAAACAAACTTGTCCT 57.455 33.333 0.00 0.00 41.31 3.85
4405 5939 6.385649 AGCGAGTTTAAGGATGAAAAACAA 57.614 33.333 0.00 0.00 0.00 2.83
4414 5948 6.635030 AAACTTTGAAGCGAGTTTAAGGAT 57.365 33.333 0.05 0.00 42.52 3.24
4426 5960 7.872483 TGAGGGATGATTTTTAAACTTTGAAGC 59.128 33.333 0.00 0.00 0.00 3.86
4430 5964 9.546428 AAGTTGAGGGATGATTTTTAAACTTTG 57.454 29.630 0.00 0.00 32.91 2.77
4437 5971 8.147704 GGTTTTGAAGTTGAGGGATGATTTTTA 58.852 33.333 0.00 0.00 0.00 1.52
4445 5979 2.893489 GCTGGTTTTGAAGTTGAGGGAT 59.107 45.455 0.00 0.00 0.00 3.85
4448 5982 3.799281 TTGCTGGTTTTGAAGTTGAGG 57.201 42.857 0.00 0.00 0.00 3.86
4475 6009 3.194968 TCTGGTTTCATTAGTCGAGGGAC 59.805 47.826 0.00 0.00 43.76 4.46
4479 6013 8.879342 AAGATTATCTGGTTTCATTAGTCGAG 57.121 34.615 0.00 0.00 0.00 4.04
4482 6016 7.307455 GGCGAAGATTATCTGGTTTCATTAGTC 60.307 40.741 0.00 0.00 0.00 2.59
4487 6021 4.137543 GGGCGAAGATTATCTGGTTTCAT 58.862 43.478 0.00 0.00 0.00 2.57
4507 6041 3.259123 ACCGCCTAAACCGTTATATAGGG 59.741 47.826 8.83 1.45 36.29 3.53
4517 6051 0.813184 TACTCAGACCGCCTAAACCG 59.187 55.000 0.00 0.00 0.00 4.44
4519 6053 3.509740 GTCTTACTCAGACCGCCTAAAC 58.490 50.000 0.00 0.00 45.84 2.01
4530 6064 0.170561 CGGGTCCACGTCTTACTCAG 59.829 60.000 0.00 0.00 0.00 3.35
4537 6071 0.248289 CAATAACCGGGTCCACGTCT 59.752 55.000 6.32 0.00 0.00 4.18
4538 6072 0.247185 TCAATAACCGGGTCCACGTC 59.753 55.000 6.32 0.00 0.00 4.34
4544 6078 5.591099 TCGTATTTAGTCAATAACCGGGTC 58.409 41.667 6.32 0.00 0.00 4.46
4553 6087 5.523916 GCCATGTGTCTCGTATTTAGTCAAT 59.476 40.000 0.00 0.00 0.00 2.57
4566 6100 1.270550 CAAAACCAGGCCATGTGTCTC 59.729 52.381 5.01 0.00 0.00 3.36
4569 6103 1.039856 GTCAAAACCAGGCCATGTGT 58.960 50.000 5.01 0.00 0.00 3.72
4570 6104 0.318120 GGTCAAAACCAGGCCATGTG 59.682 55.000 5.01 0.00 45.68 3.21
4571 6105 2.745379 GGTCAAAACCAGGCCATGT 58.255 52.632 5.01 0.00 45.68 3.21
4582 6116 2.116827 AACTGACGTGGTGGTCAAAA 57.883 45.000 0.00 0.00 45.59 2.44
4610 6144 0.683504 TAGAGGCGTGAGGGTCCTTC 60.684 60.000 0.00 0.00 0.00 3.46
4625 6159 2.029828 GGAGTGTGCGGGACATATAGAG 60.030 54.545 5.42 0.00 36.78 2.43
4631 6165 2.185310 GAAGGGAGTGTGCGGGACAT 62.185 60.000 5.42 0.00 36.78 3.06
4648 6182 0.178984 GGGTTTGTCGGAAAGGGGAA 60.179 55.000 0.00 0.00 0.00 3.97
4658 6195 3.056035 AGCTCTAGGTTTAGGGTTTGTCG 60.056 47.826 0.00 0.00 29.50 4.35
4669 6206 0.461961 CCGCTGCTAGCTCTAGGTTT 59.538 55.000 17.23 0.00 39.60 3.27
4676 6213 2.580867 CGTCACCGCTGCTAGCTC 60.581 66.667 17.23 6.88 39.60 4.09
4684 6221 1.374252 GTGAATCACCGTCACCGCT 60.374 57.895 1.10 0.00 39.62 5.52
4686 6223 0.038618 TGAGTGAATCACCGTCACCG 60.039 55.000 10.12 0.00 45.39 4.94
4701 6238 1.078426 GCCGCTACAACCCATGAGT 60.078 57.895 0.00 0.00 0.00 3.41
4732 6269 1.574702 GCCACCTTTGTCGTAGCCAC 61.575 60.000 0.00 0.00 0.00 5.01
4741 6278 0.390735 GGATACGTCGCCACCTTTGT 60.391 55.000 0.00 0.00 0.00 2.83
4744 6281 1.030457 CTAGGATACGTCGCCACCTT 58.970 55.000 9.04 0.00 46.39 3.50
4745 6282 0.106819 ACTAGGATACGTCGCCACCT 60.107 55.000 9.04 9.10 46.39 4.00
4757 6294 1.000955 CGCCTAAATCGCCACTAGGAT 59.999 52.381 0.00 0.00 35.17 3.24
4761 6298 0.179094 CCACGCCTAAATCGCCACTA 60.179 55.000 0.00 0.00 0.00 2.74
4762 6299 1.449601 CCACGCCTAAATCGCCACT 60.450 57.895 0.00 0.00 0.00 4.00
4768 6305 0.035820 TCCACCACCACGCCTAAATC 60.036 55.000 0.00 0.00 0.00 2.17
4780 6317 0.968405 ATGCAACAACCATCCACCAC 59.032 50.000 0.00 0.00 0.00 4.16
4830 6367 1.261619 CAAGGTCGTTGTTGCTCACTC 59.738 52.381 0.00 0.00 0.00 3.51
4834 6371 2.095718 GGAATCAAGGTCGTTGTTGCTC 60.096 50.000 5.25 0.00 37.43 4.26
4836 6373 1.606668 TGGAATCAAGGTCGTTGTTGC 59.393 47.619 5.25 5.51 37.43 4.17
4837 6374 3.138304 TCTGGAATCAAGGTCGTTGTTG 58.862 45.455 5.25 0.00 37.43 3.33
4840 6377 3.319137 TCTCTGGAATCAAGGTCGTTG 57.681 47.619 0.00 0.00 37.52 4.10
4842 6379 5.878406 AATATCTCTGGAATCAAGGTCGT 57.122 39.130 0.00 0.00 0.00 4.34
4919 6457 7.664082 ATTCATACAAGAGAGACAAACACTG 57.336 36.000 0.00 0.00 0.00 3.66
4941 6479 6.017192 ACGATCCATGTGACTACCCTATATT 58.983 40.000 0.00 0.00 0.00 1.28
4964 6502 4.385825 TGTAATGAACAACACCTCTCCAC 58.614 43.478 0.00 0.00 34.29 4.02
4980 6518 7.795482 ATGGCCATCAAAATGAAATGTAATG 57.205 32.000 14.09 0.00 34.61 1.90
4985 6523 7.119116 CCATCATATGGCCATCAAAATGAAATG 59.881 37.037 25.51 20.58 44.70 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.