Multiple sequence alignment - TraesCS6B01G362800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G362800 chr6B 100.000 4443 0 0 1 4443 634050546 634046104 0.000000e+00 8205.0
1 TraesCS6B01G362800 chr6A 91.368 1228 73 14 2407 3632 563743057 563741861 0.000000e+00 1650.0
2 TraesCS6B01G362800 chr6A 89.060 649 51 10 3792 4427 563727575 563728216 0.000000e+00 787.0
3 TraesCS6B01G362800 chr6A 83.395 542 63 11 1 526 563745642 563745112 1.120000e-130 477.0
4 TraesCS6B01G362800 chr6A 78.824 765 59 33 760 1499 563744294 563743608 1.910000e-113 420.0
5 TraesCS6B01G362800 chr6A 85.220 318 29 10 1783 2098 563743646 563743345 1.200000e-80 311.0
6 TraesCS6B01G362800 chr6A 87.302 189 14 5 1547 1728 563743843 563743658 1.620000e-49 207.0
7 TraesCS6B01G362800 chr6A 93.220 59 3 1 2143 2201 563743174 563743117 7.920000e-13 86.1
8 TraesCS6B01G362800 chr6D 90.837 753 48 11 3686 4431 420761030 420760292 0.000000e+00 989.0
9 TraesCS6B01G362800 chr6D 89.221 770 56 15 1783 2542 420762592 420761840 0.000000e+00 937.0
10 TraesCS6B01G362800 chr6D 86.410 780 55 13 2862 3632 420761838 420761101 0.000000e+00 806.0
11 TraesCS6B01G362800 chr6D 91.129 372 18 6 760 1128 420763371 420763012 1.440000e-134 490.0
12 TraesCS6B01G362800 chr6D 82.540 378 29 21 1125 1499 420762897 420762554 9.340000e-77 298.0
13 TraesCS6B01G362800 chr1A 83.168 101 16 1 380 480 465451894 465451795 1.700000e-14 91.6
14 TraesCS6B01G362800 chr5D 77.551 147 32 1 381 526 300960036 300959890 2.200000e-13 87.9
15 TraesCS6B01G362800 chr5D 81.633 98 17 1 380 477 66745256 66745352 3.680000e-11 80.5
16 TraesCS6B01G362800 chr7D 85.507 69 10 0 380 448 54011925 54011993 6.160000e-09 73.1
17 TraesCS6B01G362800 chr1D 82.222 90 10 6 439 526 7472295 7472210 6.160000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G362800 chr6B 634046104 634050546 4442 True 8205.000000 8205 100.000000 1 4443 1 chr6B.!!$R1 4442
1 TraesCS6B01G362800 chr6A 563727575 563728216 641 False 787.000000 787 89.060000 3792 4427 1 chr6A.!!$F1 635
2 TraesCS6B01G362800 chr6A 563741861 563745642 3781 True 525.183333 1650 86.554833 1 3632 6 chr6A.!!$R1 3631
3 TraesCS6B01G362800 chr6D 420760292 420763371 3079 True 704.000000 989 88.027400 760 4431 5 chr6D.!!$R1 3671

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
296 298 0.046397 AAGGGGGAAGGTGGCTCTAT 59.954 55.0 0.0 0.0 0.00 1.98 F
390 405 0.106335 TAGAGCGACTACTCCCTCCG 59.894 60.0 0.0 0.0 37.39 4.63 F
1547 2325 0.036952 CGTTGACTCTGCCTGGATGT 60.037 55.0 0.0 0.0 0.00 3.06 F
1557 2335 0.034089 GCCTGGATGTTTACCCTGCT 60.034 55.0 0.0 0.0 0.00 4.24 F
1856 2636 0.184451 CAGACATGCCCTAATGCCCT 59.816 55.0 0.0 0.0 0.00 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1538 2316 0.034089 AGCAGGGTAAACATCCAGGC 60.034 55.0 0.00 0.00 0.00 4.85 R
1552 2330 0.320771 AACGGTGAGTAGCAAGCAGG 60.321 55.0 0.00 0.00 0.00 4.85 R
3284 4202 0.107312 CCATCAGGGTCAGGCTGAAG 60.107 60.0 20.62 9.79 0.00 3.02 R
3424 4342 0.906756 TTCAGGAGGAGGCAGGAGTG 60.907 60.0 0.00 0.00 0.00 3.51 R
3852 4817 0.096628 CTGCAATGACGCTCTGAAGC 59.903 55.0 0.00 0.00 45.56 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
80 81 3.705638 CGAGCGGCCATGCATACG 61.706 66.667 2.24 6.04 37.31 3.06
107 108 0.392595 CGGAGGAGTAACCCTTTGCC 60.393 60.000 0.00 0.00 40.05 4.52
153 154 2.095161 GCGTCGGGAGATAAGGATACAG 60.095 54.545 0.00 0.00 43.27 2.74
155 156 3.498334 GTCGGGAGATAAGGATACAGGT 58.502 50.000 0.00 0.00 43.27 4.00
157 158 3.117246 TCGGGAGATAAGGATACAGGTGT 60.117 47.826 0.00 0.00 41.41 4.16
158 159 3.005897 CGGGAGATAAGGATACAGGTGTG 59.994 52.174 0.00 0.00 41.41 3.82
174 175 0.874390 TGTGCACTTCCTCGATTTGC 59.126 50.000 19.41 0.00 0.00 3.68
194 196 5.584253 TGCTATTCACTAGTCTGAAGGAC 57.416 43.478 0.00 0.00 44.80 3.85
204 206 2.705658 AGTCTGAAGGACCACATGACAA 59.294 45.455 0.00 0.00 45.54 3.18
209 211 5.013079 TCTGAAGGACCACATGACAATAGTT 59.987 40.000 0.00 0.00 0.00 2.24
217 219 4.522405 CCACATGACAATAGTTGGTTGGAA 59.478 41.667 0.00 0.00 34.12 3.53
219 221 4.215399 ACATGACAATAGTTGGTTGGAACG 59.785 41.667 0.00 0.00 34.12 3.95
220 222 2.550606 TGACAATAGTTGGTTGGAACGC 59.449 45.455 0.00 0.00 34.12 4.84
221 223 2.550606 GACAATAGTTGGTTGGAACGCA 59.449 45.455 0.00 0.00 34.12 5.24
222 224 2.952978 ACAATAGTTGGTTGGAACGCAA 59.047 40.909 0.00 0.00 34.12 4.85
223 225 3.572255 ACAATAGTTGGTTGGAACGCAAT 59.428 39.130 0.00 0.00 34.12 3.56
224 226 4.038642 ACAATAGTTGGTTGGAACGCAATT 59.961 37.500 0.00 0.00 34.12 2.32
225 227 2.507339 AGTTGGTTGGAACGCAATTG 57.493 45.000 0.00 0.00 0.00 2.32
226 228 0.858583 GTTGGTTGGAACGCAATTGC 59.141 50.000 20.76 20.76 37.78 3.56
227 229 0.249657 TTGGTTGGAACGCAATTGCC 60.250 50.000 24.24 10.91 37.91 4.52
228 230 1.732683 GGTTGGAACGCAATTGCCG 60.733 57.895 24.24 20.12 37.91 5.69
244 246 1.226379 CCGCAACATGCAATCGTCC 60.226 57.895 2.99 0.00 45.36 4.79
246 248 0.109827 CGCAACATGCAATCGTCCAA 60.110 50.000 2.99 0.00 45.36 3.53
261 263 1.043116 TCCAATCGCGGATGAGGAGT 61.043 55.000 6.13 0.00 0.00 3.85
266 268 4.554036 GCGGATGAGGAGTGGGCC 62.554 72.222 0.00 0.00 0.00 5.80
268 270 3.866582 GGATGAGGAGTGGGCCCG 61.867 72.222 19.37 0.00 0.00 6.13
269 271 3.866582 GATGAGGAGTGGGCCCGG 61.867 72.222 19.37 0.00 0.00 5.73
284 286 4.293671 CGGGCCAAACAAGGGGGA 62.294 66.667 4.39 0.00 0.00 4.81
293 295 2.081585 AACAAGGGGGAAGGTGGCTC 62.082 60.000 0.00 0.00 0.00 4.70
295 297 0.914417 CAAGGGGGAAGGTGGCTCTA 60.914 60.000 0.00 0.00 0.00 2.43
296 298 0.046397 AAGGGGGAAGGTGGCTCTAT 59.954 55.000 0.00 0.00 0.00 1.98
322 325 2.689083 GTGCCCAACACTTTTTGCC 58.311 52.632 0.00 0.00 46.41 4.52
336 339 1.202099 TTTGCCGGGTGGAGGTATGA 61.202 55.000 2.18 0.00 37.49 2.15
339 342 0.182775 GCCGGGTGGAGGTATGAAAT 59.817 55.000 2.18 0.00 37.49 2.17
342 345 2.704065 CCGGGTGGAGGTATGAAATACT 59.296 50.000 0.00 0.00 43.37 2.12
343 346 3.135895 CCGGGTGGAGGTATGAAATACTT 59.864 47.826 0.00 0.00 43.37 2.24
344 347 4.384868 CCGGGTGGAGGTATGAAATACTTT 60.385 45.833 0.00 0.00 43.37 2.66
345 348 6.431577 CCGGGTGGAGGTATGAAATACTTTG 61.432 48.000 0.00 0.00 43.37 2.77
362 377 3.270877 CTTTGGGAATGGGTCTCTAACG 58.729 50.000 0.00 0.00 0.00 3.18
367 382 2.235402 GGAATGGGTCTCTAACGGACAA 59.765 50.000 0.00 0.00 35.61 3.18
389 404 2.572209 ATAGAGCGACTACTCCCTCC 57.428 55.000 0.00 0.00 37.39 4.30
390 405 0.106335 TAGAGCGACTACTCCCTCCG 59.894 60.000 0.00 0.00 37.39 4.63
394 409 0.245813 GCGACTACTCCCTCCGTTTT 59.754 55.000 0.00 0.00 0.00 2.43
402 417 7.042925 CGACTACTCCCTCCGTTTTTAAATATG 60.043 40.741 0.00 0.00 0.00 1.78
473 488 9.962783 ATACGTAATTTAGAGTGTAGATTCACC 57.037 33.333 0.00 0.00 38.91 4.02
477 492 9.262358 GTAATTTAGAGTGTAGATTCACCCATC 57.738 37.037 0.00 0.00 38.91 3.51
480 495 8.603898 TTTAGAGTGTAGATTCACCCATCTTA 57.396 34.615 0.00 0.00 38.91 2.10
481 496 8.783660 TTAGAGTGTAGATTCACCCATCTTAT 57.216 34.615 0.00 0.00 38.91 1.73
483 498 8.783660 AGAGTGTAGATTCACCCATCTTATTA 57.216 34.615 0.00 0.00 38.91 0.98
486 501 8.378565 AGTGTAGATTCACCCATCTTATTATGG 58.621 37.037 0.00 0.00 45.20 2.74
516 532 9.660180 AGTTCTTATTGAAATCTCTACAAGGAC 57.340 33.333 0.00 0.00 36.30 3.85
517 533 9.660180 GTTCTTATTGAAATCTCTACAAGGACT 57.340 33.333 0.00 0.00 36.30 3.85
546 562 8.848474 AATTATATGTAGGAACGAAGGGAATG 57.152 34.615 0.00 0.00 0.00 2.67
547 563 2.396590 TGTAGGAACGAAGGGAATGC 57.603 50.000 0.00 0.00 0.00 3.56
548 564 1.065709 TGTAGGAACGAAGGGAATGCC 60.066 52.381 0.00 0.00 0.00 4.40
549 565 1.065709 GTAGGAACGAAGGGAATGCCA 60.066 52.381 0.00 0.00 35.15 4.92
550 566 0.625849 AGGAACGAAGGGAATGCCAT 59.374 50.000 0.00 0.00 35.15 4.40
551 567 1.005924 AGGAACGAAGGGAATGCCATT 59.994 47.619 0.00 0.00 41.70 3.16
552 568 1.824852 GGAACGAAGGGAATGCCATTT 59.175 47.619 0.00 0.00 38.51 2.32
553 569 2.233676 GGAACGAAGGGAATGCCATTTT 59.766 45.455 0.00 0.00 38.51 1.82
554 570 3.306710 GGAACGAAGGGAATGCCATTTTT 60.307 43.478 0.00 0.00 38.51 1.94
555 571 4.081917 GGAACGAAGGGAATGCCATTTTTA 60.082 41.667 0.00 0.00 38.51 1.52
556 572 5.395214 GGAACGAAGGGAATGCCATTTTTAT 60.395 40.000 0.00 0.00 38.51 1.40
557 573 5.675684 ACGAAGGGAATGCCATTTTTATT 57.324 34.783 0.00 0.00 38.51 1.40
558 574 6.048732 ACGAAGGGAATGCCATTTTTATTT 57.951 33.333 0.00 0.00 38.51 1.40
559 575 6.472016 ACGAAGGGAATGCCATTTTTATTTT 58.528 32.000 0.00 0.00 38.51 1.82
560 576 6.939730 ACGAAGGGAATGCCATTTTTATTTTT 59.060 30.769 0.00 0.00 38.51 1.94
561 577 8.097662 ACGAAGGGAATGCCATTTTTATTTTTA 58.902 29.630 0.00 0.00 38.51 1.52
562 578 9.108284 CGAAGGGAATGCCATTTTTATTTTTAT 57.892 29.630 0.00 0.00 38.51 1.40
598 614 9.347240 AGGGAATGTCATATTAATGAGTTTGAG 57.653 33.333 0.00 0.00 42.80 3.02
600 616 7.800380 GGAATGTCATATTAATGAGTTTGAGCG 59.200 37.037 0.00 0.00 42.80 5.03
601 617 6.048073 TGTCATATTAATGAGTTTGAGCGC 57.952 37.500 0.00 0.00 42.80 5.92
605 621 4.882671 ATTAATGAGTTTGAGCGCGATT 57.117 36.364 12.10 0.00 0.00 3.34
611 627 1.069906 AGTTTGAGCGCGATTTCACAC 60.070 47.619 12.10 13.10 0.00 3.82
639 655 9.907229 CAAGAGAGGAAATTATATTATACCCCC 57.093 37.037 0.00 0.00 0.00 5.40
640 656 9.875725 AAGAGAGGAAATTATATTATACCCCCT 57.124 33.333 0.00 0.00 0.00 4.79
641 657 9.508721 AGAGAGGAAATTATATTATACCCCCTC 57.491 37.037 0.00 0.00 37.36 4.30
642 658 9.508721 GAGAGGAAATTATATTATACCCCCTCT 57.491 37.037 15.70 15.70 46.52 3.69
643 659 9.285359 AGAGGAAATTATATTATACCCCCTCTG 57.715 37.037 0.00 0.00 43.44 3.35
644 660 9.059023 GAGGAAATTATATTATACCCCCTCTGT 57.941 37.037 0.00 0.00 35.02 3.41
646 662 8.272889 GGAAATTATATTATACCCCCTCTGTCC 58.727 40.741 0.00 0.00 0.00 4.02
647 663 7.766736 AATTATATTATACCCCCTCTGTCCC 57.233 40.000 0.00 0.00 0.00 4.46
657 683 1.065126 CCCTCTGTCCCCACTCAAATC 60.065 57.143 0.00 0.00 0.00 2.17
659 685 3.107601 CCTCTGTCCCCACTCAAATCTA 58.892 50.000 0.00 0.00 0.00 1.98
668 694 7.233553 TGTCCCCACTCAAATCTACTCTATATG 59.766 40.741 0.00 0.00 0.00 1.78
714 1153 9.890629 ACTTATCCGTTTCACATATGCATATAT 57.109 29.630 18.70 5.13 0.00 0.86
718 1157 8.039603 TCCGTTTCACATATGCATATATTTCC 57.960 34.615 18.70 5.38 0.00 3.13
719 1158 7.663493 TCCGTTTCACATATGCATATATTTCCA 59.337 33.333 18.70 0.00 0.00 3.53
721 1160 9.281075 CGTTTCACATATGCATATATTTCCATG 57.719 33.333 18.70 9.32 0.00 3.66
725 1164 9.517868 TCACATATGCATATATTTCCATGTTGA 57.482 29.630 18.70 9.84 0.00 3.18
757 1371 3.118592 AGTTGAACGATTGAGGGAGGATC 60.119 47.826 0.00 0.00 0.00 3.36
758 1372 2.752030 TGAACGATTGAGGGAGGATCT 58.248 47.619 0.00 0.00 33.73 2.75
915 1570 1.380515 TTCCCCTCCTCTGCTCTCG 60.381 63.158 0.00 0.00 0.00 4.04
916 1571 1.864263 TTCCCCTCCTCTGCTCTCGA 61.864 60.000 0.00 0.00 0.00 4.04
919 1574 1.178534 CCCTCCTCTGCTCTCGATCC 61.179 65.000 0.00 0.00 0.00 3.36
920 1575 0.178992 CCTCCTCTGCTCTCGATCCT 60.179 60.000 0.00 0.00 0.00 3.24
921 1576 1.238439 CTCCTCTGCTCTCGATCCTC 58.762 60.000 0.00 0.00 0.00 3.71
923 1578 1.178534 CCTCTGCTCTCGATCCTCCC 61.179 65.000 0.00 0.00 0.00 4.30
924 1579 1.152652 TCTGCTCTCGATCCTCCCC 60.153 63.158 0.00 0.00 0.00 4.81
925 1580 1.152567 CTGCTCTCGATCCTCCCCT 60.153 63.158 0.00 0.00 0.00 4.79
1125 1781 5.303078 ACATATACTTTCTGCCATCTCTCGT 59.697 40.000 0.00 0.00 0.00 4.18
1135 1911 2.605366 GCCATCTCTCGTTCTTAGTTGC 59.395 50.000 0.00 0.00 0.00 4.17
1137 1913 3.190874 CATCTCTCGTTCTTAGTTGCCC 58.809 50.000 0.00 0.00 0.00 5.36
1145 1921 3.497332 GTTCTTAGTTGCCCCCTTTCTT 58.503 45.455 0.00 0.00 0.00 2.52
1197 1974 1.337703 GATTTTGATGCTGGCGCCATA 59.662 47.619 32.87 22.75 34.43 2.74
1222 2000 6.286240 CCATCGATTGGTAGGATGATCTTA 57.714 41.667 0.00 0.00 40.99 2.10
1236 2014 4.106029 TGATCTTAGAGTTTCGAACCCG 57.894 45.455 0.00 0.00 37.07 5.28
1259 2037 0.250234 TCAAGTCGATTCTGCCTGGG 59.750 55.000 0.00 0.00 0.00 4.45
1283 2061 2.242926 TGACTCTGCTTGCTACTCACT 58.757 47.619 0.00 0.00 0.00 3.41
1284 2062 2.630098 TGACTCTGCTTGCTACTCACTT 59.370 45.455 0.00 0.00 0.00 3.16
1288 2066 4.202305 ACTCTGCTTGCTACTCACTTTTCT 60.202 41.667 0.00 0.00 0.00 2.52
1296 2074 6.604735 TGCTACTCACTTTTCTTCTGTTTC 57.395 37.500 0.00 0.00 0.00 2.78
1316 2094 6.551975 TGTTTCTATTGATGGATCATGCCAAT 59.448 34.615 0.00 1.51 42.16 3.16
1364 2142 1.355720 AGCACTATCCCAGCCAGTTTT 59.644 47.619 0.00 0.00 0.00 2.43
1365 2143 2.576191 AGCACTATCCCAGCCAGTTTTA 59.424 45.455 0.00 0.00 0.00 1.52
1366 2144 3.203040 AGCACTATCCCAGCCAGTTTTAT 59.797 43.478 0.00 0.00 0.00 1.40
1367 2145 4.412199 AGCACTATCCCAGCCAGTTTTATA 59.588 41.667 0.00 0.00 0.00 0.98
1368 2146 5.073691 AGCACTATCCCAGCCAGTTTTATAT 59.926 40.000 0.00 0.00 0.00 0.86
1369 2147 5.182001 GCACTATCCCAGCCAGTTTTATATG 59.818 44.000 0.00 0.00 0.00 1.78
1370 2148 5.707298 CACTATCCCAGCCAGTTTTATATGG 59.293 44.000 0.00 0.00 39.73 2.74
1379 2157 5.536554 CCAGTTTTATATGGCTATCTGCG 57.463 43.478 0.00 0.00 44.05 5.18
1380 2158 4.997395 CCAGTTTTATATGGCTATCTGCGT 59.003 41.667 0.00 0.00 44.05 5.24
1381 2159 5.106948 CCAGTTTTATATGGCTATCTGCGTG 60.107 44.000 0.00 0.00 44.05 5.34
1382 2160 5.696270 CAGTTTTATATGGCTATCTGCGTGA 59.304 40.000 0.00 0.00 44.05 4.35
1383 2161 6.202762 CAGTTTTATATGGCTATCTGCGTGAA 59.797 38.462 0.00 0.00 44.05 3.18
1384 2162 6.425114 AGTTTTATATGGCTATCTGCGTGAAG 59.575 38.462 0.00 0.00 44.05 3.02
1411 2189 8.311836 CCAACCTGTCTAAGTTGACTTCTTATA 58.688 37.037 0.00 0.00 44.93 0.98
1412 2190 9.877178 CAACCTGTCTAAGTTGACTTCTTATAT 57.123 33.333 0.00 0.00 44.93 0.86
1476 2254 9.750783 TGTAGGAGTAGTATAATAATCCCACTC 57.249 37.037 20.28 7.97 40.09 3.51
1477 2255 9.750783 GTAGGAGTAGTATAATAATCCCACTCA 57.249 37.037 19.85 2.01 40.09 3.41
1479 2257 9.261035 AGGAGTAGTATAATAATCCCACTCATG 57.739 37.037 19.85 0.00 40.09 3.07
1480 2258 9.256228 GGAGTAGTATAATAATCCCACTCATGA 57.744 37.037 14.22 0.00 34.53 3.07
1486 2264 9.836864 GTATAATAATCCCACTCATGATATGCA 57.163 33.333 0.00 0.00 0.00 3.96
1488 2266 7.876936 AATAATCCCACTCATGATATGCATC 57.123 36.000 0.19 0.00 34.15 3.91
1489 2267 5.516059 AATCCCACTCATGATATGCATCT 57.484 39.130 0.19 0.00 34.15 2.90
1490 2268 6.631763 AATCCCACTCATGATATGCATCTA 57.368 37.500 0.19 0.00 34.15 1.98
1491 2269 6.631763 ATCCCACTCATGATATGCATCTAA 57.368 37.500 0.19 0.00 34.15 2.10
1492 2270 6.438186 TCCCACTCATGATATGCATCTAAA 57.562 37.500 0.19 0.00 34.15 1.85
1493 2271 7.024345 TCCCACTCATGATATGCATCTAAAT 57.976 36.000 0.19 0.00 34.15 1.40
1494 2272 7.464273 TCCCACTCATGATATGCATCTAAATT 58.536 34.615 0.19 0.00 34.15 1.82
1495 2273 7.946219 TCCCACTCATGATATGCATCTAAATTT 59.054 33.333 0.19 0.00 34.15 1.82
1496 2274 8.027189 CCCACTCATGATATGCATCTAAATTTG 58.973 37.037 0.19 0.00 34.15 2.32
1497 2275 7.541091 CCACTCATGATATGCATCTAAATTTGC 59.459 37.037 0.19 0.00 39.33 3.68
1505 2283 5.518848 TGCATCTAAATTTGCATGGTAGG 57.481 39.130 0.00 0.00 43.54 3.18
1506 2284 5.199723 TGCATCTAAATTTGCATGGTAGGA 58.800 37.500 0.00 0.00 43.54 2.94
1507 2285 5.300034 TGCATCTAAATTTGCATGGTAGGAG 59.700 40.000 0.00 0.00 43.54 3.69
1508 2286 5.278660 GCATCTAAATTTGCATGGTAGGAGG 60.279 44.000 0.00 0.00 38.72 4.30
1509 2287 5.708736 TCTAAATTTGCATGGTAGGAGGA 57.291 39.130 0.00 0.00 0.00 3.71
1510 2288 6.266131 TCTAAATTTGCATGGTAGGAGGAT 57.734 37.500 0.00 0.00 0.00 3.24
1511 2289 6.672593 TCTAAATTTGCATGGTAGGAGGATT 58.327 36.000 0.00 0.00 0.00 3.01
1512 2290 5.859205 AAATTTGCATGGTAGGAGGATTC 57.141 39.130 0.00 0.00 0.00 2.52
1513 2291 4.524802 ATTTGCATGGTAGGAGGATTCA 57.475 40.909 0.00 0.00 0.00 2.57
1514 2292 4.524802 TTTGCATGGTAGGAGGATTCAT 57.475 40.909 0.00 0.00 0.00 2.57
1515 2293 3.497103 TGCATGGTAGGAGGATTCATG 57.503 47.619 0.00 0.00 38.46 3.07
1516 2294 2.107031 TGCATGGTAGGAGGATTCATGG 59.893 50.000 0.00 0.00 36.62 3.66
1517 2295 2.373169 GCATGGTAGGAGGATTCATGGA 59.627 50.000 0.00 0.00 36.62 3.41
1518 2296 3.558746 GCATGGTAGGAGGATTCATGGAG 60.559 52.174 0.00 0.00 36.62 3.86
1519 2297 2.050144 TGGTAGGAGGATTCATGGAGC 58.950 52.381 0.00 0.00 0.00 4.70
1520 2298 2.334023 GGTAGGAGGATTCATGGAGCT 58.666 52.381 0.00 0.00 0.00 4.09
1521 2299 2.708325 GGTAGGAGGATTCATGGAGCTT 59.292 50.000 0.00 0.00 0.00 3.74
1522 2300 3.244387 GGTAGGAGGATTCATGGAGCTTC 60.244 52.174 0.00 0.00 0.00 3.86
1523 2301 1.415659 AGGAGGATTCATGGAGCTTCG 59.584 52.381 0.00 0.00 0.00 3.79
1524 2302 1.414181 GGAGGATTCATGGAGCTTCGA 59.586 52.381 0.00 0.00 0.00 3.71
1525 2303 2.158900 GGAGGATTCATGGAGCTTCGAA 60.159 50.000 0.00 0.00 0.00 3.71
1526 2304 2.869192 GAGGATTCATGGAGCTTCGAAC 59.131 50.000 0.00 0.00 0.00 3.95
1527 2305 1.943340 GGATTCATGGAGCTTCGAACC 59.057 52.381 0.00 0.00 0.00 3.62
1528 2306 1.943340 GATTCATGGAGCTTCGAACCC 59.057 52.381 0.00 0.00 0.00 4.11
1529 2307 0.391130 TTCATGGAGCTTCGAACCCG 60.391 55.000 0.00 0.00 37.07 5.28
1530 2308 1.079127 CATGGAGCTTCGAACCCGT 60.079 57.895 0.00 0.00 37.05 5.28
1531 2309 0.673644 CATGGAGCTTCGAACCCGTT 60.674 55.000 0.00 0.00 37.05 4.44
1532 2310 0.673644 ATGGAGCTTCGAACCCGTTG 60.674 55.000 0.00 0.00 37.05 4.10
1533 2311 1.005394 GGAGCTTCGAACCCGTTGA 60.005 57.895 0.00 0.00 37.05 3.18
1534 2312 1.289800 GGAGCTTCGAACCCGTTGAC 61.290 60.000 0.00 0.00 37.05 3.18
1535 2313 0.319641 GAGCTTCGAACCCGTTGACT 60.320 55.000 0.00 0.00 37.05 3.41
1536 2314 0.319641 AGCTTCGAACCCGTTGACTC 60.320 55.000 0.00 0.00 37.05 3.36
1537 2315 0.319641 GCTTCGAACCCGTTGACTCT 60.320 55.000 0.00 0.00 37.05 3.24
1538 2316 1.419374 CTTCGAACCCGTTGACTCTG 58.581 55.000 0.00 0.00 37.05 3.35
1539 2317 0.599204 TTCGAACCCGTTGACTCTGC 60.599 55.000 0.00 0.00 37.05 4.26
1540 2318 2.027625 CGAACCCGTTGACTCTGCC 61.028 63.158 0.00 0.00 0.00 4.85
1541 2319 1.371558 GAACCCGTTGACTCTGCCT 59.628 57.895 0.00 0.00 0.00 4.75
1542 2320 0.951040 GAACCCGTTGACTCTGCCTG 60.951 60.000 0.00 0.00 0.00 4.85
1543 2321 2.046892 CCCGTTGACTCTGCCTGG 60.047 66.667 0.00 0.00 0.00 4.45
1544 2322 2.583441 CCCGTTGACTCTGCCTGGA 61.583 63.158 0.00 0.00 0.00 3.86
1545 2323 1.599047 CCGTTGACTCTGCCTGGAT 59.401 57.895 0.00 0.00 0.00 3.41
1546 2324 0.742281 CCGTTGACTCTGCCTGGATG 60.742 60.000 0.00 0.00 0.00 3.51
1547 2325 0.036952 CGTTGACTCTGCCTGGATGT 60.037 55.000 0.00 0.00 0.00 3.06
1548 2326 1.609061 CGTTGACTCTGCCTGGATGTT 60.609 52.381 0.00 0.00 0.00 2.71
1549 2327 2.508526 GTTGACTCTGCCTGGATGTTT 58.491 47.619 0.00 0.00 0.00 2.83
1550 2328 3.674997 GTTGACTCTGCCTGGATGTTTA 58.325 45.455 0.00 0.00 0.00 2.01
1551 2329 3.334583 TGACTCTGCCTGGATGTTTAC 57.665 47.619 0.00 0.00 0.00 2.01
1552 2330 2.027192 TGACTCTGCCTGGATGTTTACC 60.027 50.000 0.00 0.00 0.00 2.85
1553 2331 1.282157 ACTCTGCCTGGATGTTTACCC 59.718 52.381 0.00 0.00 0.00 3.69
1554 2332 1.561542 CTCTGCCTGGATGTTTACCCT 59.438 52.381 0.00 0.00 0.00 4.34
1555 2333 1.281867 TCTGCCTGGATGTTTACCCTG 59.718 52.381 0.00 0.00 0.00 4.45
1556 2334 0.323360 TGCCTGGATGTTTACCCTGC 60.323 55.000 0.00 0.00 0.00 4.85
1557 2335 0.034089 GCCTGGATGTTTACCCTGCT 60.034 55.000 0.00 0.00 0.00 4.24
1558 2336 1.616994 GCCTGGATGTTTACCCTGCTT 60.617 52.381 0.00 0.00 0.00 3.91
1559 2337 2.094675 CCTGGATGTTTACCCTGCTTG 58.905 52.381 0.00 0.00 0.00 4.01
1560 2338 1.474077 CTGGATGTTTACCCTGCTTGC 59.526 52.381 0.00 0.00 0.00 4.01
1561 2339 1.075374 TGGATGTTTACCCTGCTTGCT 59.925 47.619 0.00 0.00 0.00 3.91
1562 2340 2.307392 TGGATGTTTACCCTGCTTGCTA 59.693 45.455 0.00 0.00 0.00 3.49
1563 2341 2.683362 GGATGTTTACCCTGCTTGCTAC 59.317 50.000 0.00 0.00 0.00 3.58
1564 2342 3.610911 GATGTTTACCCTGCTTGCTACT 58.389 45.455 0.00 0.00 0.00 2.57
1565 2343 3.053831 TGTTTACCCTGCTTGCTACTC 57.946 47.619 0.00 0.00 0.00 2.59
1566 2344 2.370519 TGTTTACCCTGCTTGCTACTCA 59.629 45.455 0.00 0.00 0.00 3.41
1567 2345 2.742589 GTTTACCCTGCTTGCTACTCAC 59.257 50.000 0.00 0.00 0.00 3.51
1568 2346 0.902531 TACCCTGCTTGCTACTCACC 59.097 55.000 0.00 0.00 0.00 4.02
1569 2347 1.448540 CCCTGCTTGCTACTCACCG 60.449 63.158 0.00 0.00 0.00 4.94
1570 2348 1.293498 CCTGCTTGCTACTCACCGT 59.707 57.895 0.00 0.00 0.00 4.83
1571 2349 0.320771 CCTGCTTGCTACTCACCGTT 60.321 55.000 0.00 0.00 0.00 4.44
1572 2350 1.071605 CTGCTTGCTACTCACCGTTC 58.928 55.000 0.00 0.00 0.00 3.95
1573 2351 0.679505 TGCTTGCTACTCACCGTTCT 59.320 50.000 0.00 0.00 0.00 3.01
1574 2352 1.070134 TGCTTGCTACTCACCGTTCTT 59.930 47.619 0.00 0.00 0.00 2.52
1575 2353 1.461127 GCTTGCTACTCACCGTTCTTG 59.539 52.381 0.00 0.00 0.00 3.02
1576 2354 2.755650 CTTGCTACTCACCGTTCTTGT 58.244 47.619 0.00 0.00 0.00 3.16
1577 2355 2.148916 TGCTACTCACCGTTCTTGTG 57.851 50.000 0.00 0.00 35.01 3.33
1578 2356 1.411246 TGCTACTCACCGTTCTTGTGT 59.589 47.619 0.00 0.00 35.25 3.72
1579 2357 2.159014 TGCTACTCACCGTTCTTGTGTT 60.159 45.455 0.00 0.00 35.25 3.32
1580 2358 2.475487 GCTACTCACCGTTCTTGTGTTC 59.525 50.000 0.00 0.00 35.25 3.18
1581 2359 2.981859 ACTCACCGTTCTTGTGTTCT 57.018 45.000 0.00 0.00 35.25 3.01
1582 2360 3.261981 ACTCACCGTTCTTGTGTTCTT 57.738 42.857 0.00 0.00 35.25 2.52
1583 2361 2.936498 ACTCACCGTTCTTGTGTTCTTG 59.064 45.455 0.00 0.00 35.25 3.02
1584 2362 2.936498 CTCACCGTTCTTGTGTTCTTGT 59.064 45.455 0.00 0.00 35.25 3.16
1585 2363 3.340034 TCACCGTTCTTGTGTTCTTGTT 58.660 40.909 0.00 0.00 35.25 2.83
1586 2364 3.126171 TCACCGTTCTTGTGTTCTTGTTG 59.874 43.478 0.00 0.00 35.25 3.33
1587 2365 3.126171 CACCGTTCTTGTGTTCTTGTTGA 59.874 43.478 0.00 0.00 0.00 3.18
1588 2366 3.945285 ACCGTTCTTGTGTTCTTGTTGAT 59.055 39.130 0.00 0.00 0.00 2.57
1589 2367 4.201910 ACCGTTCTTGTGTTCTTGTTGATG 60.202 41.667 0.00 0.00 0.00 3.07
1590 2368 4.035091 CCGTTCTTGTGTTCTTGTTGATGA 59.965 41.667 0.00 0.00 0.00 2.92
1591 2369 5.448496 CCGTTCTTGTGTTCTTGTTGATGAA 60.448 40.000 0.00 0.00 0.00 2.57
1592 2370 6.201517 CGTTCTTGTGTTCTTGTTGATGAAT 58.798 36.000 0.00 0.00 0.00 2.57
1593 2371 6.358030 CGTTCTTGTGTTCTTGTTGATGAATC 59.642 38.462 0.00 0.00 0.00 2.52
1594 2372 6.940831 TCTTGTGTTCTTGTTGATGAATCA 57.059 33.333 0.00 0.00 34.44 2.57
1595 2373 7.514784 TCTTGTGTTCTTGTTGATGAATCAT 57.485 32.000 0.00 0.00 36.56 2.45
1596 2374 7.364970 TCTTGTGTTCTTGTTGATGAATCATG 58.635 34.615 0.00 0.00 36.56 3.07
1597 2375 5.463286 TGTGTTCTTGTTGATGAATCATGC 58.537 37.500 0.00 0.00 36.56 4.06
1598 2376 4.860907 GTGTTCTTGTTGATGAATCATGCC 59.139 41.667 0.00 0.00 36.56 4.40
1599 2377 4.523558 TGTTCTTGTTGATGAATCATGCCA 59.476 37.500 0.00 0.00 36.56 4.92
1600 2378 5.010820 TGTTCTTGTTGATGAATCATGCCAA 59.989 36.000 0.00 0.00 36.56 4.52
1601 2379 5.925506 TCTTGTTGATGAATCATGCCAAT 57.074 34.783 0.00 0.00 36.56 3.16
1602 2380 5.898174 TCTTGTTGATGAATCATGCCAATC 58.102 37.500 0.00 0.00 36.56 2.67
1603 2381 4.659111 TGTTGATGAATCATGCCAATCC 57.341 40.909 0.00 0.00 36.56 3.01
1604 2382 4.283337 TGTTGATGAATCATGCCAATCCT 58.717 39.130 0.00 0.00 36.56 3.24
1605 2383 4.098807 TGTTGATGAATCATGCCAATCCTG 59.901 41.667 0.00 0.00 36.56 3.86
1606 2384 4.173290 TGATGAATCATGCCAATCCTGA 57.827 40.909 0.00 0.00 0.00 3.86
1607 2385 4.736473 TGATGAATCATGCCAATCCTGAT 58.264 39.130 0.00 0.00 0.00 2.90
1608 2386 5.144832 TGATGAATCATGCCAATCCTGATT 58.855 37.500 0.00 0.00 41.14 2.57
1614 2392 7.606135 AATCATGCCAATCCTGATTCAATAA 57.394 32.000 0.00 0.00 35.28 1.40
1615 2393 7.792364 ATCATGCCAATCCTGATTCAATAAT 57.208 32.000 0.00 0.00 0.00 1.28
1616 2394 7.606135 TCATGCCAATCCTGATTCAATAATT 57.394 32.000 0.00 0.00 0.00 1.40
1617 2395 7.438564 TCATGCCAATCCTGATTCAATAATTG 58.561 34.615 0.00 7.72 0.00 2.32
1618 2396 6.164417 TGCCAATCCTGATTCAATAATTGG 57.836 37.500 20.02 20.02 43.78 3.16
1619 2397 5.898397 TGCCAATCCTGATTCAATAATTGGA 59.102 36.000 24.59 12.86 43.70 3.53
1620 2398 6.555738 TGCCAATCCTGATTCAATAATTGGAT 59.444 34.615 24.59 14.14 43.70 3.41
1621 2399 7.095270 GCCAATCCTGATTCAATAATTGGATC 58.905 38.462 24.59 6.86 43.70 3.36
1622 2400 7.609056 CCAATCCTGATTCAATAATTGGATCC 58.391 38.462 19.82 4.20 43.68 3.36
1623 2401 7.310237 CCAATCCTGATTCAATAATTGGATCCC 60.310 40.741 19.82 0.00 43.68 3.85
1624 2402 5.644188 TCCTGATTCAATAATTGGATCCCC 58.356 41.667 9.90 0.00 43.68 4.81
1625 2403 5.135876 TCCTGATTCAATAATTGGATCCCCA 59.864 40.000 9.90 0.00 43.68 4.96
1626 2404 5.244626 CCTGATTCAATAATTGGATCCCCAC 59.755 44.000 9.90 0.00 43.68 4.61
1627 2405 6.029492 TGATTCAATAATTGGATCCCCACT 57.971 37.500 9.90 0.00 43.68 4.00
1628 2406 6.442961 TGATTCAATAATTGGATCCCCACTT 58.557 36.000 9.90 0.00 43.68 3.16
1629 2407 7.590907 TGATTCAATAATTGGATCCCCACTTA 58.409 34.615 9.90 2.29 43.68 2.24
1630 2408 7.725397 TGATTCAATAATTGGATCCCCACTTAG 59.275 37.037 9.90 0.00 43.68 2.18
1631 2409 5.385198 TCAATAATTGGATCCCCACTTAGC 58.615 41.667 9.90 0.00 43.41 3.09
1632 2410 5.103728 TCAATAATTGGATCCCCACTTAGCA 60.104 40.000 9.90 0.00 43.41 3.49
1633 2411 3.756082 AATTGGATCCCCACTTAGCAA 57.244 42.857 9.90 0.00 43.41 3.91
1634 2412 3.979501 ATTGGATCCCCACTTAGCAAT 57.020 42.857 9.90 0.00 43.41 3.56
1635 2413 5.402054 AATTGGATCCCCACTTAGCAATA 57.598 39.130 9.90 0.00 43.41 1.90
1636 2414 5.605540 ATTGGATCCCCACTTAGCAATAT 57.394 39.130 9.90 0.00 43.41 1.28
1637 2415 4.640771 TGGATCCCCACTTAGCAATATC 57.359 45.455 9.90 0.00 37.58 1.63
1638 2416 4.242811 TGGATCCCCACTTAGCAATATCT 58.757 43.478 9.90 0.00 37.58 1.98
1639 2417 4.287067 TGGATCCCCACTTAGCAATATCTC 59.713 45.833 9.90 0.00 37.58 2.75
1640 2418 4.287067 GGATCCCCACTTAGCAATATCTCA 59.713 45.833 0.00 0.00 0.00 3.27
1641 2419 4.963318 TCCCCACTTAGCAATATCTCAG 57.037 45.455 0.00 0.00 0.00 3.35
1642 2420 3.071602 TCCCCACTTAGCAATATCTCAGC 59.928 47.826 0.00 0.00 0.00 4.26
1643 2421 3.406764 CCCACTTAGCAATATCTCAGCC 58.593 50.000 0.00 0.00 0.00 4.85
1644 2422 3.181451 CCCACTTAGCAATATCTCAGCCA 60.181 47.826 0.00 0.00 0.00 4.75
1645 2423 4.063689 CCACTTAGCAATATCTCAGCCAG 58.936 47.826 0.00 0.00 0.00 4.85
1646 2424 4.444022 CCACTTAGCAATATCTCAGCCAGT 60.444 45.833 0.00 0.00 0.00 4.00
1647 2425 5.121811 CACTTAGCAATATCTCAGCCAGTT 58.878 41.667 0.00 0.00 0.00 3.16
1648 2426 5.587844 CACTTAGCAATATCTCAGCCAGTTT 59.412 40.000 0.00 0.00 0.00 2.66
1649 2427 6.763135 CACTTAGCAATATCTCAGCCAGTTTA 59.237 38.462 0.00 0.00 0.00 2.01
1690 2468 2.127708 ACCTGTCTGGGTTGACTTCTT 58.872 47.619 0.33 0.00 41.11 2.52
1692 2470 3.910627 ACCTGTCTGGGTTGACTTCTTAT 59.089 43.478 0.33 0.00 41.11 1.73
1693 2471 4.256920 CCTGTCTGGGTTGACTTCTTATG 58.743 47.826 0.00 0.00 37.79 1.90
1694 2472 4.256920 CTGTCTGGGTTGACTTCTTATGG 58.743 47.826 0.00 0.00 37.79 2.74
1695 2473 3.907474 TGTCTGGGTTGACTTCTTATGGA 59.093 43.478 0.00 0.00 37.79 3.41
1696 2474 4.020218 TGTCTGGGTTGACTTCTTATGGAG 60.020 45.833 0.00 0.00 37.79 3.86
1698 2476 5.187186 GTCTGGGTTGACTTCTTATGGAGTA 59.813 44.000 0.00 0.00 34.39 2.59
1699 2477 5.783360 TCTGGGTTGACTTCTTATGGAGTAA 59.217 40.000 0.00 0.00 0.00 2.24
1782 2562 6.680874 AAAGATGTAGTACTCTGTACTCCG 57.319 41.667 12.85 0.00 0.00 4.63
1783 2563 5.356291 AGATGTAGTACTCTGTACTCCGT 57.644 43.478 12.85 4.56 0.00 4.69
1784 2564 6.477053 AGATGTAGTACTCTGTACTCCGTA 57.523 41.667 12.85 1.22 0.00 4.02
1788 2568 8.600449 ATGTAGTACTCTGTACTCCGTATAAC 57.400 38.462 12.85 5.90 0.00 1.89
1856 2636 0.184451 CAGACATGCCCTAATGCCCT 59.816 55.000 0.00 0.00 0.00 5.19
1857 2637 0.475906 AGACATGCCCTAATGCCCTC 59.524 55.000 0.00 0.00 0.00 4.30
1858 2638 0.475906 GACATGCCCTAATGCCCTCT 59.524 55.000 0.00 0.00 0.00 3.69
1859 2639 1.699634 GACATGCCCTAATGCCCTCTA 59.300 52.381 0.00 0.00 0.00 2.43
1913 2694 3.322254 AGTTGTTCAAAAACCACCACACA 59.678 39.130 0.00 0.00 32.76 3.72
1940 2722 9.490663 GTATGTGTGTTTAGCAACTTCATAATC 57.509 33.333 0.00 0.00 33.58 1.75
2038 2822 8.270744 AGCTCTTCAAGAACTAATTGTATGGAT 58.729 33.333 0.00 0.00 0.00 3.41
2084 2868 5.057149 TGGAGAGTGAAGTCTAAAACAAGC 58.943 41.667 0.00 0.00 0.00 4.01
2098 2882 9.737025 GTCTAAAACAAGCTAAATGTTAGTACG 57.263 33.333 2.78 0.00 39.98 3.67
2099 2883 9.480053 TCTAAAACAAGCTAAATGTTAGTACGT 57.520 29.630 2.78 0.00 39.98 3.57
2129 3039 6.867662 ATCCCTCAAATGTATCGATTGTTC 57.132 37.500 1.71 0.00 0.00 3.18
2130 3040 5.739959 TCCCTCAAATGTATCGATTGTTCA 58.260 37.500 1.71 0.00 0.00 3.18
2132 3042 6.828273 TCCCTCAAATGTATCGATTGTTCATT 59.172 34.615 1.71 7.49 0.00 2.57
2133 3043 7.990314 TCCCTCAAATGTATCGATTGTTCATTA 59.010 33.333 1.71 0.00 0.00 1.90
2134 3044 8.285394 CCCTCAAATGTATCGATTGTTCATTAG 58.715 37.037 1.71 5.88 0.00 1.73
2135 3045 9.045223 CCTCAAATGTATCGATTGTTCATTAGA 57.955 33.333 1.71 0.00 0.00 2.10
2137 3047 9.599866 TCAAATGTATCGATTGTTCATTAGAGT 57.400 29.630 1.71 0.00 0.00 3.24
2294 3204 5.214293 TGGGGTAGGATAGGAAGTTAACTC 58.786 45.833 8.95 2.71 0.00 3.01
2311 3221 8.685838 AGTTAACTCCATTTGCAAACTACTTA 57.314 30.769 15.41 4.29 0.00 2.24
2319 3229 7.450014 TCCATTTGCAAACTACTTATCCTTTCA 59.550 33.333 15.41 0.00 0.00 2.69
2348 3258 2.841266 TGGGGGAACGAACTGATTCATA 59.159 45.455 0.00 0.00 34.14 2.15
2352 3262 5.308825 GGGGAACGAACTGATTCATATGAT 58.691 41.667 6.17 0.00 34.14 2.45
2360 3270 6.237942 CGAACTGATTCATATGATATTCCCGC 60.238 42.308 6.17 0.00 34.14 6.13
2361 3271 6.053632 ACTGATTCATATGATATTCCCGCA 57.946 37.500 6.17 0.00 0.00 5.69
2384 3294 1.336755 ACAAATCGGTGCTGAAACCAC 59.663 47.619 0.00 0.00 40.53 4.16
2386 3296 1.909700 AATCGGTGCTGAAACCACAT 58.090 45.000 0.00 0.00 40.53 3.21
2387 3297 1.167851 ATCGGTGCTGAAACCACATG 58.832 50.000 0.00 0.00 40.53 3.21
2399 3309 5.245531 TGAAACCACATGAGGACATTAGTC 58.754 41.667 16.78 3.09 44.21 2.59
2411 3327 3.865745 GGACATTAGTCTGATGTGAACCG 59.134 47.826 14.53 0.00 44.36 4.44
2430 3346 7.754924 GTGAACCGATTAACATTCACATCAATT 59.245 33.333 10.30 0.00 46.59 2.32
2458 3374 8.860088 GCCAGTGTTAATTGGGATAATTCTTAT 58.140 33.333 5.96 0.00 33.79 1.73
2490 3406 6.256053 ACCATATGAGGAAATTTGACCTGTT 58.744 36.000 3.65 0.00 36.57 3.16
2503 3419 2.028112 TGACCTGTTTACCTAGCAGCAG 60.028 50.000 0.00 0.00 0.00 4.24
2551 3467 9.296400 GGATTTGCGTATATTTGAAAGCTTAAA 57.704 29.630 0.00 0.00 0.00 1.52
2593 3509 6.310941 TGAGAAGAGATCAGGGGAGTAATAG 58.689 44.000 0.00 0.00 0.00 1.73
2595 3511 6.928202 AGAAGAGATCAGGGGAGTAATAGAA 58.072 40.000 0.00 0.00 0.00 2.10
2602 3518 4.101585 TCAGGGGAGTAATAGAAGTGCATG 59.898 45.833 0.00 0.00 0.00 4.06
2603 3519 4.040755 AGGGGAGTAATAGAAGTGCATGT 58.959 43.478 0.00 0.00 0.00 3.21
2669 3585 3.002965 ACTGTTTTTAGCCTACGCACAAC 59.997 43.478 0.00 0.00 37.52 3.32
2709 3625 9.561069 ACAGTAAACTTCAGTTACATTTCATCT 57.439 29.630 0.00 0.00 37.25 2.90
2731 3647 8.571336 CATCTATTGTTATGGGTCTGAAATTCC 58.429 37.037 0.00 0.00 0.00 3.01
2732 3648 7.638444 TCTATTGTTATGGGTCTGAAATTCCA 58.362 34.615 0.00 0.00 0.00 3.53
2764 3680 5.221880 TCAAATATGCATCTAAATTGGCGC 58.778 37.500 0.19 0.00 0.00 6.53
2791 3707 8.867935 CAATGTCTATATAAGAAGAATGCCGAG 58.132 37.037 0.00 0.00 35.47 4.63
2795 3711 9.134734 GTCTATATAAGAAGAATGCCGAGAAAG 57.865 37.037 0.00 0.00 35.47 2.62
2796 3712 6.793492 ATATAAGAAGAATGCCGAGAAAGC 57.207 37.500 0.00 0.00 0.00 3.51
2821 3737 3.806949 AGATGTACAAACCACCCACAT 57.193 42.857 0.00 0.00 32.70 3.21
2842 3758 3.695830 TGGCCTGACTAAACAACTAGG 57.304 47.619 3.32 0.00 0.00 3.02
2843 3759 3.244582 TGGCCTGACTAAACAACTAGGA 58.755 45.455 3.32 0.00 0.00 2.94
2851 3767 4.714632 ACTAAACAACTAGGAAAGCTGCA 58.285 39.130 1.02 0.00 0.00 4.41
2852 3768 5.130350 ACTAAACAACTAGGAAAGCTGCAA 58.870 37.500 1.02 0.00 0.00 4.08
2911 3828 4.827284 GGGATCAAAACTCTGAAGTTCCAA 59.173 41.667 0.00 0.00 45.07 3.53
2918 3835 3.393800 ACTCTGAAGTTCCAACATGACG 58.606 45.455 0.00 0.00 28.74 4.35
2922 3839 2.158885 TGAAGTTCCAACATGACGACCA 60.159 45.455 0.00 0.00 0.00 4.02
2931 3848 4.023622 CCAACATGACGACCATTGTTTGTA 60.024 41.667 0.00 0.00 31.94 2.41
2942 3859 3.296628 CATTGTTTGTAACCTGACGTGC 58.703 45.455 0.00 0.00 0.00 5.34
2946 3863 3.181505 TGTTTGTAACCTGACGTGCAAAG 60.182 43.478 0.00 0.00 33.54 2.77
2975 3892 0.248289 AAAATGGTGCCAGCATGCTC 59.752 50.000 19.68 8.52 36.31 4.26
2976 3893 0.613853 AAATGGTGCCAGCATGCTCT 60.614 50.000 19.68 0.00 36.31 4.09
2977 3894 1.035932 AATGGTGCCAGCATGCTCTC 61.036 55.000 19.68 12.94 36.31 3.20
2988 3905 2.348620 TGCTCTCGCACATGCCTT 59.651 55.556 0.00 0.00 42.25 4.35
2989 3906 1.742880 TGCTCTCGCACATGCCTTC 60.743 57.895 0.00 0.00 42.25 3.46
2990 3907 1.742880 GCTCTCGCACATGCCTTCA 60.743 57.895 0.00 0.00 37.91 3.02
2991 3908 1.300971 GCTCTCGCACATGCCTTCAA 61.301 55.000 0.00 0.00 37.91 2.69
2992 3909 0.725686 CTCTCGCACATGCCTTCAAG 59.274 55.000 0.00 0.00 37.91 3.02
2998 3915 2.669364 GCACATGCCTTCAAGTTCAAG 58.331 47.619 0.00 0.00 34.31 3.02
3024 3941 2.419990 CCTCACATTGCGATCCAGGTTA 60.420 50.000 0.00 0.00 0.00 2.85
3150 4067 4.082523 TGGCCGGCCTTCTTCGAG 62.083 66.667 43.34 0.00 36.94 4.04
3153 4070 4.162690 CCGGCCTTCTTCGAGGGG 62.163 72.222 0.00 0.00 37.29 4.79
3156 4073 2.188207 GCCTTCTTCGAGGGGCTC 59.812 66.667 7.44 0.00 41.20 4.70
3187 4104 0.249398 ACACAGGACGGTATGCTTCC 59.751 55.000 0.00 0.00 0.00 3.46
3188 4105 0.537188 CACAGGACGGTATGCTTCCT 59.463 55.000 0.00 0.00 40.63 3.36
3189 4106 1.066143 CACAGGACGGTATGCTTCCTT 60.066 52.381 2.47 0.00 37.69 3.36
3190 4107 1.207329 ACAGGACGGTATGCTTCCTTC 59.793 52.381 2.47 0.00 37.69 3.46
3203 4120 2.154462 CTTCCTTCAACAGCCGTTCAT 58.846 47.619 0.00 0.00 31.13 2.57
3284 4202 2.306847 ACCATGTTCCCTTGTGTTCAC 58.693 47.619 0.00 0.00 0.00 3.18
3285 4203 2.091885 ACCATGTTCCCTTGTGTTCACT 60.092 45.455 4.59 0.00 0.00 3.41
3424 4342 3.003275 TCAACAGCGTTTCCATCAAGTTC 59.997 43.478 0.00 0.00 0.00 3.01
3448 4366 2.037620 CTGCCTCCTCCTGAATCCGG 62.038 65.000 0.00 0.00 0.00 5.14
3449 4367 2.825264 CCTCCTCCTGAATCCGGC 59.175 66.667 0.00 0.00 0.00 6.13
3450 4368 2.812619 CCTCCTCCTGAATCCGGCC 61.813 68.421 0.00 0.00 0.00 6.13
3451 4369 2.040442 TCCTCCTGAATCCGGCCA 59.960 61.111 2.24 0.00 0.00 5.36
3465 4383 0.526524 CGGCCAGTTCTCGAGTCATC 60.527 60.000 13.13 1.88 0.00 2.92
3520 4446 4.766375 TGATTAGGTTCCAGAATCCGTTC 58.234 43.478 11.37 0.00 34.46 3.95
3623 4549 6.407202 AGTTTCTACTGTTAACCAGGCTATG 58.593 40.000 2.48 0.00 46.06 2.23
3632 4558 6.953101 TGTTAACCAGGCTATGATCTTGTAA 58.047 36.000 2.48 0.00 0.00 2.41
3633 4559 6.821665 TGTTAACCAGGCTATGATCTTGTAAC 59.178 38.462 2.48 0.00 0.00 2.50
3634 4560 5.700402 AACCAGGCTATGATCTTGTAACT 57.300 39.130 0.00 0.00 0.00 2.24
3635 4561 5.700402 ACCAGGCTATGATCTTGTAACTT 57.300 39.130 0.00 0.00 0.00 2.66
3636 4562 5.431765 ACCAGGCTATGATCTTGTAACTTG 58.568 41.667 0.00 0.00 0.00 3.16
3637 4563 4.274459 CCAGGCTATGATCTTGTAACTTGC 59.726 45.833 0.00 0.00 0.00 4.01
3638 4564 4.877823 CAGGCTATGATCTTGTAACTTGCA 59.122 41.667 0.00 0.00 0.00 4.08
3639 4565 5.530171 CAGGCTATGATCTTGTAACTTGCAT 59.470 40.000 0.00 0.00 0.00 3.96
3640 4566 6.039047 CAGGCTATGATCTTGTAACTTGCATT 59.961 38.462 0.00 0.00 0.00 3.56
3641 4567 6.039047 AGGCTATGATCTTGTAACTTGCATTG 59.961 38.462 0.00 0.00 0.00 2.82
3642 4568 5.684626 GCTATGATCTTGTAACTTGCATTGC 59.315 40.000 0.46 0.46 0.00 3.56
3643 4569 4.439305 TGATCTTGTAACTTGCATTGCC 57.561 40.909 6.12 0.00 0.00 4.52
3644 4570 3.825585 TGATCTTGTAACTTGCATTGCCA 59.174 39.130 6.12 0.00 0.00 4.92
3645 4571 4.463539 TGATCTTGTAACTTGCATTGCCAT 59.536 37.500 6.12 0.00 0.00 4.40
3646 4572 4.177165 TCTTGTAACTTGCATTGCCATG 57.823 40.909 6.12 0.00 0.00 3.66
3647 4573 3.825585 TCTTGTAACTTGCATTGCCATGA 59.174 39.130 6.12 1.08 31.07 3.07
3648 4574 4.280425 TCTTGTAACTTGCATTGCCATGAA 59.720 37.500 6.12 0.00 31.07 2.57
3649 4575 3.911868 TGTAACTTGCATTGCCATGAAC 58.088 40.909 6.12 0.26 31.07 3.18
3650 4576 3.573538 TGTAACTTGCATTGCCATGAACT 59.426 39.130 6.12 0.00 31.07 3.01
3651 4577 2.736144 ACTTGCATTGCCATGAACTG 57.264 45.000 6.12 0.00 31.07 3.16
3652 4578 1.965643 ACTTGCATTGCCATGAACTGT 59.034 42.857 6.12 0.00 31.07 3.55
3653 4579 2.288579 ACTTGCATTGCCATGAACTGTG 60.289 45.455 6.12 0.00 31.07 3.66
3654 4580 1.618487 TGCATTGCCATGAACTGTGA 58.382 45.000 6.12 0.00 31.07 3.58
3677 4603 3.619038 CCTAATCTGTTCGGTCTGAAAGC 59.381 47.826 0.00 0.00 38.60 3.51
3684 4610 2.380410 CGGTCTGAAAGCGTTCCGG 61.380 63.158 9.96 0.00 43.74 5.14
3685 4611 1.005394 GGTCTGAAAGCGTTCCGGA 60.005 57.895 0.00 0.00 32.28 5.14
3688 4614 0.108329 TCTGAAAGCGTTCCGGATCC 60.108 55.000 4.15 0.00 32.28 3.36
3703 4668 4.717778 TCCGGATCCTGTTTTGGAACTATA 59.282 41.667 10.75 0.00 39.85 1.31
3707 4672 5.293569 GGATCCTGTTTTGGAACTATACACG 59.706 44.000 3.84 0.00 39.85 4.49
3708 4673 3.998341 TCCTGTTTTGGAACTATACACGC 59.002 43.478 0.00 0.00 36.70 5.34
3788 4753 6.952773 ATAAGTAGTTTTGTGGTCTTGCAA 57.047 33.333 0.00 0.00 0.00 4.08
3802 4767 8.148351 TGTGGTCTTGCAATATATACTAGGAAC 58.852 37.037 0.00 0.00 0.00 3.62
3821 4786 2.787994 ACAGAATGCTCAACTCCCTTG 58.212 47.619 0.00 0.00 42.53 3.61
3829 4794 3.840666 TGCTCAACTCCCTTGACTAATCT 59.159 43.478 0.00 0.00 33.65 2.40
3836 4801 5.776358 ACTCCCTTGACTAATCTCATCTCT 58.224 41.667 0.00 0.00 0.00 3.10
3852 4817 3.827008 TCTCTTGATTCAATCCTCCCG 57.173 47.619 0.00 0.00 0.00 5.14
3857 4822 1.559219 TGATTCAATCCTCCCGCTTCA 59.441 47.619 0.00 0.00 0.00 3.02
3876 4847 1.392853 CAGAGCGTCATTGCAGTCTTC 59.607 52.381 0.00 0.00 37.31 2.87
3881 4852 1.126846 CGTCATTGCAGTCTTCCGTTC 59.873 52.381 0.00 0.00 0.00 3.95
3890 4861 1.546476 AGTCTTCCGTTCGATTCAGCT 59.454 47.619 0.00 0.00 0.00 4.24
3906 4877 1.448717 GCTGACGCTTTCTCCTCCC 60.449 63.158 0.00 0.00 0.00 4.30
3909 4883 3.372554 GACGCTTTCTCCTCCCCCG 62.373 68.421 0.00 0.00 0.00 5.73
3970 4947 0.247736 GTCCACGATGGCAGAGAAGT 59.752 55.000 0.00 0.00 37.47 3.01
4125 5102 4.838486 CCGCCTCGACGTGAGCTC 62.838 72.222 6.82 6.82 43.82 4.09
4193 5170 1.142748 GCACTCTGATCTCCGGGTG 59.857 63.158 0.00 0.00 0.00 4.61
4233 5210 4.112341 ACCAGCCGCTCGACGTAC 62.112 66.667 0.00 0.00 41.42 3.67
4317 5294 1.135257 CAGATCTGTGTCGTCAGTCCC 60.135 57.143 14.95 0.00 36.85 4.46
4413 5394 3.373130 GTGTCTGTCATCCACATGTCATG 59.627 47.826 11.41 11.41 33.23 3.07
4419 5400 5.993055 TGTCATCCACATGTCATGTCTAAT 58.007 37.500 15.73 6.91 42.70 1.73
4420 5401 7.069826 TCTGTCATCCACATGTCATGTCTAATA 59.930 37.037 15.73 0.00 42.70 0.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 1.770658 TCCCCACTGATATCCTGCAAG 59.229 52.381 0.00 0.00 0.00 4.01
14 15 1.622449 CCACACCTCTCCCCACTGATA 60.622 57.143 0.00 0.00 0.00 2.15
17 18 1.843376 ACCACACCTCTCCCCACTG 60.843 63.158 0.00 0.00 0.00 3.66
18 19 1.843376 CACCACACCTCTCCCCACT 60.843 63.158 0.00 0.00 0.00 4.00
19 20 2.750350 CACCACACCTCTCCCCAC 59.250 66.667 0.00 0.00 0.00 4.61
20 21 3.249189 GCACCACACCTCTCCCCA 61.249 66.667 0.00 0.00 0.00 4.96
107 108 1.592223 GTCGAGGGACCACTTCCTG 59.408 63.158 0.00 0.00 45.09 3.86
143 144 3.055385 GGAAGTGCACACCTGTATCCTTA 60.055 47.826 21.04 0.00 0.00 2.69
153 154 1.197721 CAAATCGAGGAAGTGCACACC 59.802 52.381 21.04 20.74 0.00 4.16
155 156 0.874390 GCAAATCGAGGAAGTGCACA 59.126 50.000 21.04 0.00 35.28 4.57
157 158 2.760634 TAGCAAATCGAGGAAGTGCA 57.239 45.000 10.07 0.00 37.68 4.57
158 159 3.623060 TGAATAGCAAATCGAGGAAGTGC 59.377 43.478 0.00 0.00 35.41 4.40
174 175 5.419155 TGTGGTCCTTCAGACTAGTGAATAG 59.581 44.000 0.00 0.00 45.54 1.73
194 196 4.078537 TCCAACCAACTATTGTCATGTGG 58.921 43.478 0.00 0.00 0.00 4.17
204 206 3.613910 GCAATTGCGTTCCAACCAACTAT 60.614 43.478 15.87 0.00 35.99 2.12
209 211 1.365633 GGCAATTGCGTTCCAACCA 59.634 52.632 23.48 0.00 43.26 3.67
217 219 1.733758 CATGTTGCGGCAATTGCGT 60.734 52.632 23.48 4.69 43.26 5.24
219 221 2.779987 GCATGTTGCGGCAATTGC 59.220 55.556 26.63 26.63 35.05 3.56
228 230 2.187707 GATTGGACGATTGCATGTTGC 58.812 47.619 0.00 0.00 45.29 4.17
244 246 0.877649 CCACTCCTCATCCGCGATTG 60.878 60.000 8.23 4.53 0.00 2.67
246 248 2.502492 CCCACTCCTCATCCGCGAT 61.502 63.158 8.23 0.00 0.00 4.58
268 270 1.913262 CTTCCCCCTTGTTTGGCCC 60.913 63.158 0.00 0.00 0.00 5.80
269 271 1.913262 CCTTCCCCCTTGTTTGGCC 60.913 63.158 0.00 0.00 0.00 5.36
277 279 0.046397 ATAGAGCCACCTTCCCCCTT 59.954 55.000 0.00 0.00 0.00 3.95
284 286 1.070758 CGTATGCCATAGAGCCACCTT 59.929 52.381 0.00 0.00 0.00 3.50
321 324 2.704065 AGTATTTCATACCTCCACCCGG 59.296 50.000 0.00 0.00 36.40 5.73
322 325 4.417426 AAGTATTTCATACCTCCACCCG 57.583 45.455 0.00 0.00 36.40 5.28
336 339 5.536497 AGAGACCCATTCCCAAAGTATTT 57.464 39.130 0.00 0.00 40.26 1.40
339 342 4.081309 CGTTAGAGACCCATTCCCAAAGTA 60.081 45.833 0.00 0.00 0.00 2.24
342 345 2.026636 CCGTTAGAGACCCATTCCCAAA 60.027 50.000 0.00 0.00 0.00 3.28
343 346 1.557832 CCGTTAGAGACCCATTCCCAA 59.442 52.381 0.00 0.00 0.00 4.12
344 347 1.200519 CCGTTAGAGACCCATTCCCA 58.799 55.000 0.00 0.00 0.00 4.37
345 348 1.138464 GTCCGTTAGAGACCCATTCCC 59.862 57.143 0.00 0.00 0.00 3.97
362 377 4.261280 GGAGTAGTCGCTCTATTCTTGTCC 60.261 50.000 8.77 0.00 36.20 4.02
367 382 3.868619 AGGGAGTAGTCGCTCTATTCT 57.131 47.619 11.20 0.00 42.13 2.40
448 463 8.408601 GGGTGAATCTACACTCTAAATTACGTA 58.591 37.037 0.00 0.00 38.14 3.57
454 469 7.682787 AGATGGGTGAATCTACACTCTAAAT 57.317 36.000 0.00 0.00 41.33 1.40
462 477 8.504811 TCCATAATAAGATGGGTGAATCTACA 57.495 34.615 2.70 0.00 45.67 2.74
469 484 7.789831 AGAACTACTCCATAATAAGATGGGTGA 59.210 37.037 2.70 0.00 45.67 4.02
490 506 9.660180 GTCCTTGTAGAGATTTCAATAAGAACT 57.340 33.333 0.00 0.00 35.56 3.01
520 536 9.938280 CATTCCCTTCGTTCCTACATATAATTA 57.062 33.333 0.00 0.00 0.00 1.40
521 537 7.390718 GCATTCCCTTCGTTCCTACATATAATT 59.609 37.037 0.00 0.00 0.00 1.40
522 538 6.879458 GCATTCCCTTCGTTCCTACATATAAT 59.121 38.462 0.00 0.00 0.00 1.28
529 545 1.065709 TGGCATTCCCTTCGTTCCTAC 60.066 52.381 0.00 0.00 0.00 3.18
571 587 9.699410 TCAAACTCATTAATATGACATTCCCTT 57.301 29.630 0.00 0.00 35.87 3.95
572 588 9.347240 CTCAAACTCATTAATATGACATTCCCT 57.653 33.333 0.00 0.00 35.87 4.20
573 589 8.078596 GCTCAAACTCATTAATATGACATTCCC 58.921 37.037 0.00 0.00 35.87 3.97
574 590 7.800380 CGCTCAAACTCATTAATATGACATTCC 59.200 37.037 0.00 0.00 35.87 3.01
575 591 7.322222 GCGCTCAAACTCATTAATATGACATTC 59.678 37.037 0.00 0.00 35.87 2.67
576 592 7.134815 GCGCTCAAACTCATTAATATGACATT 58.865 34.615 0.00 0.00 35.87 2.71
577 593 6.564686 CGCGCTCAAACTCATTAATATGACAT 60.565 38.462 5.56 0.00 35.87 3.06
578 594 5.276820 CGCGCTCAAACTCATTAATATGACA 60.277 40.000 5.56 0.00 35.87 3.58
579 595 5.051039 TCGCGCTCAAACTCATTAATATGAC 60.051 40.000 5.56 0.00 35.87 3.06
581 597 5.328886 TCGCGCTCAAACTCATTAATATG 57.671 39.130 5.56 0.00 0.00 1.78
588 604 2.076100 TGAAATCGCGCTCAAACTCAT 58.924 42.857 5.56 0.00 0.00 2.90
601 617 1.391485 CCTCTCTTGCGTGTGAAATCG 59.609 52.381 0.00 0.00 0.00 3.34
605 621 2.613026 TTTCCTCTCTTGCGTGTGAA 57.387 45.000 0.00 0.00 0.00 3.18
611 627 9.099454 GGGTATAATATAATTTCCTCTCTTGCG 57.901 37.037 0.00 0.00 0.00 4.85
639 655 3.772025 AGTAGATTTGAGTGGGGACAGAG 59.228 47.826 0.00 0.00 44.46 3.35
640 656 3.769844 GAGTAGATTTGAGTGGGGACAGA 59.230 47.826 0.00 0.00 44.46 3.41
641 657 3.772025 AGAGTAGATTTGAGTGGGGACAG 59.228 47.826 0.00 0.00 44.46 3.51
642 658 3.791320 AGAGTAGATTTGAGTGGGGACA 58.209 45.455 0.00 0.00 38.70 4.02
643 659 7.233757 ACATATAGAGTAGATTTGAGTGGGGAC 59.766 40.741 0.00 0.00 0.00 4.46
644 660 7.306013 ACATATAGAGTAGATTTGAGTGGGGA 58.694 38.462 0.00 0.00 0.00 4.81
646 662 8.642432 TCAACATATAGAGTAGATTTGAGTGGG 58.358 37.037 0.00 0.00 0.00 4.61
684 710 5.448496 GCATATGTGAAACGGATAAGTGCAA 60.448 40.000 4.29 0.00 42.39 4.08
716 1155 9.474920 GTTCAACTTTAAATCATTCAACATGGA 57.525 29.630 0.00 0.00 0.00 3.41
717 1156 8.427012 CGTTCAACTTTAAATCATTCAACATGG 58.573 33.333 0.00 0.00 0.00 3.66
718 1157 9.179552 TCGTTCAACTTTAAATCATTCAACATG 57.820 29.630 0.00 0.00 0.00 3.21
719 1158 9.912634 ATCGTTCAACTTTAAATCATTCAACAT 57.087 25.926 0.00 0.00 0.00 2.71
721 1160 9.993881 CAATCGTTCAACTTTAAATCATTCAAC 57.006 29.630 0.00 0.00 0.00 3.18
722 1161 9.958234 TCAATCGTTCAACTTTAAATCATTCAA 57.042 25.926 0.00 0.00 0.00 2.69
723 1162 9.611284 CTCAATCGTTCAACTTTAAATCATTCA 57.389 29.630 0.00 0.00 0.00 2.57
724 1163 9.065871 CCTCAATCGTTCAACTTTAAATCATTC 57.934 33.333 0.00 0.00 0.00 2.67
725 1164 8.028938 CCCTCAATCGTTCAACTTTAAATCATT 58.971 33.333 0.00 0.00 0.00 2.57
726 1165 7.393234 TCCCTCAATCGTTCAACTTTAAATCAT 59.607 33.333 0.00 0.00 0.00 2.45
729 1168 6.151144 CCTCCCTCAATCGTTCAACTTTAAAT 59.849 38.462 0.00 0.00 0.00 1.40
730 1169 5.472137 CCTCCCTCAATCGTTCAACTTTAAA 59.528 40.000 0.00 0.00 0.00 1.52
733 1172 3.072476 TCCTCCCTCAATCGTTCAACTTT 59.928 43.478 0.00 0.00 0.00 2.66
735 1174 2.257207 TCCTCCCTCAATCGTTCAACT 58.743 47.619 0.00 0.00 0.00 3.16
738 1177 2.752030 AGATCCTCCCTCAATCGTTCA 58.248 47.619 0.00 0.00 0.00 3.18
739 1178 4.342665 ACTTAGATCCTCCCTCAATCGTTC 59.657 45.833 0.00 0.00 0.00 3.95
740 1179 4.290942 ACTTAGATCCTCCCTCAATCGTT 58.709 43.478 0.00 0.00 0.00 3.85
757 1371 1.069906 GTGCAGGTGCGTTGAACTTAG 60.070 52.381 0.00 0.00 45.83 2.18
758 1372 0.941542 GTGCAGGTGCGTTGAACTTA 59.058 50.000 0.00 0.00 45.83 2.24
843 1498 2.018544 CGACTGGCCACGTTTTCAA 58.981 52.632 0.00 0.00 0.00 2.69
845 1500 2.251371 GCGACTGGCCACGTTTTC 59.749 61.111 16.20 1.28 34.80 2.29
915 1570 2.205749 GGGAGGGAGGGGAGGATC 59.794 72.222 0.00 0.00 0.00 3.36
916 1571 2.289979 AGGGAGGGAGGGGAGGAT 60.290 66.667 0.00 0.00 0.00 3.24
924 1579 4.101077 AGGGAGGCAGGGAGGGAG 62.101 72.222 0.00 0.00 0.00 4.30
925 1580 4.095400 GAGGGAGGCAGGGAGGGA 62.095 72.222 0.00 0.00 0.00 4.20
1102 1758 5.777802 ACGAGAGATGGCAGAAAGTATATG 58.222 41.667 0.00 0.00 0.00 1.78
1125 1781 3.895704 AAGAAAGGGGGCAACTAAGAA 57.104 42.857 0.00 0.00 0.00 2.52
1135 1911 2.300152 GCTCCAAGAAAAAGAAAGGGGG 59.700 50.000 0.00 0.00 0.00 5.40
1137 1913 2.029918 CGGCTCCAAGAAAAAGAAAGGG 60.030 50.000 0.00 0.00 0.00 3.95
1145 1921 2.258013 CCGCACGGCTCCAAGAAAA 61.258 57.895 0.00 0.00 0.00 2.29
1166 1942 0.918983 ATCAAAATCGGCCAGAGGGA 59.081 50.000 2.24 0.00 35.59 4.20
1215 1992 3.508793 ACGGGTTCGAAACTCTAAGATCA 59.491 43.478 13.88 0.00 40.11 2.92
1236 2014 0.992802 GGCAGAATCGACTTGACGAC 59.007 55.000 0.00 0.00 44.84 4.34
1242 2020 0.036010 CACCCAGGCAGAATCGACTT 60.036 55.000 0.00 0.00 0.00 3.01
1243 2021 1.194781 ACACCCAGGCAGAATCGACT 61.195 55.000 0.00 0.00 0.00 4.18
1259 2037 2.734079 GAGTAGCAAGCAGAGTCAACAC 59.266 50.000 0.00 0.00 0.00 3.32
1283 2061 9.519191 TGATCCATCAATAGAAACAGAAGAAAA 57.481 29.630 0.00 0.00 33.08 2.29
1284 2062 9.690913 ATGATCCATCAATAGAAACAGAAGAAA 57.309 29.630 0.00 0.00 40.69 2.52
1288 2066 6.263842 GGCATGATCCATCAATAGAAACAGAA 59.736 38.462 0.00 0.00 40.69 3.02
1296 2074 5.262009 AGGATTGGCATGATCCATCAATAG 58.738 41.667 18.09 0.00 44.50 1.73
1316 2094 5.208121 GGGGATCCAATTGTTCAATTAGGA 58.792 41.667 15.23 20.25 0.00 2.94
1364 2142 3.368427 GGCTTCACGCAGATAGCCATATA 60.368 47.826 18.12 0.00 43.78 0.86
1365 2143 2.613977 GGCTTCACGCAGATAGCCATAT 60.614 50.000 18.12 0.00 43.78 1.78
1366 2144 1.270305 GGCTTCACGCAGATAGCCATA 60.270 52.381 18.12 0.00 43.78 2.74
1367 2145 0.533755 GGCTTCACGCAGATAGCCAT 60.534 55.000 18.12 0.00 43.78 4.40
1368 2146 1.153369 GGCTTCACGCAGATAGCCA 60.153 57.895 18.12 0.00 43.78 4.75
1369 2147 0.744414 TTGGCTTCACGCAGATAGCC 60.744 55.000 17.07 17.07 44.20 3.93
1370 2148 0.375106 GTTGGCTTCACGCAGATAGC 59.625 55.000 0.00 0.00 41.67 2.97
1371 2149 1.009829 GGTTGGCTTCACGCAGATAG 58.990 55.000 0.00 0.00 41.67 2.08
1372 2150 0.613260 AGGTTGGCTTCACGCAGATA 59.387 50.000 0.00 0.00 41.67 1.98
1373 2151 0.957395 CAGGTTGGCTTCACGCAGAT 60.957 55.000 0.00 0.00 41.67 2.90
1374 2152 1.597854 CAGGTTGGCTTCACGCAGA 60.598 57.895 0.00 0.00 41.67 4.26
1375 2153 1.845809 GACAGGTTGGCTTCACGCAG 61.846 60.000 0.00 0.00 41.67 5.18
1376 2154 1.891919 GACAGGTTGGCTTCACGCA 60.892 57.895 0.00 0.00 41.67 5.24
1377 2155 0.320421 TAGACAGGTTGGCTTCACGC 60.320 55.000 0.00 0.00 36.80 5.34
1378 2156 2.069273 CTTAGACAGGTTGGCTTCACG 58.931 52.381 0.00 0.00 36.80 4.35
1379 2157 3.127425 ACTTAGACAGGTTGGCTTCAC 57.873 47.619 0.00 0.00 36.80 3.18
1380 2158 3.135712 TCAACTTAGACAGGTTGGCTTCA 59.864 43.478 0.00 0.00 41.91 3.02
1381 2159 3.498777 GTCAACTTAGACAGGTTGGCTTC 59.501 47.826 0.00 0.00 42.54 3.86
1382 2160 3.477530 GTCAACTTAGACAGGTTGGCTT 58.522 45.455 0.00 0.00 42.54 4.35
1383 2161 3.127425 GTCAACTTAGACAGGTTGGCT 57.873 47.619 0.00 0.00 42.54 4.75
1384 2162 3.127425 AGTCAACTTAGACAGGTTGGC 57.873 47.619 0.00 0.00 45.07 4.52
1385 2163 4.962155 AGAAGTCAACTTAGACAGGTTGG 58.038 43.478 0.00 0.00 41.91 3.77
1386 2164 9.877178 ATATAAGAAGTCAACTTAGACAGGTTG 57.123 33.333 0.00 0.00 42.66 3.77
1450 2228 9.750783 GAGTGGGATTATTATACTACTCCTACA 57.249 37.037 18.38 4.56 43.77 2.74
1460 2238 9.836864 TGCATATCATGAGTGGGATTATTATAC 57.163 33.333 0.09 0.00 0.00 1.47
1462 2240 9.570468 GATGCATATCATGAGTGGGATTATTAT 57.430 33.333 0.00 0.00 35.05 1.28
1463 2241 8.775151 AGATGCATATCATGAGTGGGATTATTA 58.225 33.333 0.00 0.00 35.05 0.98
1464 2242 7.640313 AGATGCATATCATGAGTGGGATTATT 58.360 34.615 0.00 0.00 35.05 1.40
1465 2243 7.209340 AGATGCATATCATGAGTGGGATTAT 57.791 36.000 0.00 0.00 35.05 1.28
1466 2244 6.631763 AGATGCATATCATGAGTGGGATTA 57.368 37.500 0.00 0.00 35.05 1.75
1467 2245 5.516059 AGATGCATATCATGAGTGGGATT 57.484 39.130 0.00 0.00 35.05 3.01
1468 2246 6.631763 TTAGATGCATATCATGAGTGGGAT 57.368 37.500 0.00 0.00 35.05 3.85
1469 2247 6.438186 TTTAGATGCATATCATGAGTGGGA 57.562 37.500 0.00 0.00 35.05 4.37
1470 2248 7.698506 AATTTAGATGCATATCATGAGTGGG 57.301 36.000 0.00 0.00 35.05 4.61
1471 2249 7.541091 GCAAATTTAGATGCATATCATGAGTGG 59.459 37.037 0.00 0.00 42.12 4.00
1472 2250 8.079809 TGCAAATTTAGATGCATATCATGAGTG 58.920 33.333 0.00 4.01 46.87 3.51
1473 2251 8.173542 TGCAAATTTAGATGCATATCATGAGT 57.826 30.769 0.00 0.00 46.87 3.41
1484 2262 5.278660 CCTCCTACCATGCAAATTTAGATGC 60.279 44.000 0.00 0.00 42.86 3.91
1485 2263 6.064060 TCCTCCTACCATGCAAATTTAGATG 58.936 40.000 0.00 0.00 0.00 2.90
1486 2264 6.266131 TCCTCCTACCATGCAAATTTAGAT 57.734 37.500 0.00 0.00 0.00 1.98
1487 2265 5.708736 TCCTCCTACCATGCAAATTTAGA 57.291 39.130 0.00 0.00 0.00 2.10
1488 2266 6.547141 TGAATCCTCCTACCATGCAAATTTAG 59.453 38.462 0.00 0.00 0.00 1.85
1489 2267 6.430864 TGAATCCTCCTACCATGCAAATTTA 58.569 36.000 0.00 0.00 0.00 1.40
1490 2268 5.271598 TGAATCCTCCTACCATGCAAATTT 58.728 37.500 0.00 0.00 0.00 1.82
1491 2269 4.870636 TGAATCCTCCTACCATGCAAATT 58.129 39.130 0.00 0.00 0.00 1.82
1492 2270 4.524802 TGAATCCTCCTACCATGCAAAT 57.475 40.909 0.00 0.00 0.00 2.32
1493 2271 4.209538 CATGAATCCTCCTACCATGCAAA 58.790 43.478 0.00 0.00 0.00 3.68
1494 2272 3.435457 CCATGAATCCTCCTACCATGCAA 60.435 47.826 0.00 0.00 34.79 4.08
1495 2273 2.107031 CCATGAATCCTCCTACCATGCA 59.893 50.000 0.00 0.00 34.79 3.96
1496 2274 2.373169 TCCATGAATCCTCCTACCATGC 59.627 50.000 0.00 0.00 34.79 4.06
1497 2275 3.558746 GCTCCATGAATCCTCCTACCATG 60.559 52.174 0.00 0.00 35.61 3.66
1498 2276 2.641815 GCTCCATGAATCCTCCTACCAT 59.358 50.000 0.00 0.00 0.00 3.55
1499 2277 2.050144 GCTCCATGAATCCTCCTACCA 58.950 52.381 0.00 0.00 0.00 3.25
1500 2278 2.334023 AGCTCCATGAATCCTCCTACC 58.666 52.381 0.00 0.00 0.00 3.18
1501 2279 3.553922 CGAAGCTCCATGAATCCTCCTAC 60.554 52.174 0.00 0.00 0.00 3.18
1502 2280 2.630098 CGAAGCTCCATGAATCCTCCTA 59.370 50.000 0.00 0.00 0.00 2.94
1503 2281 1.415659 CGAAGCTCCATGAATCCTCCT 59.584 52.381 0.00 0.00 0.00 3.69
1504 2282 1.414181 TCGAAGCTCCATGAATCCTCC 59.586 52.381 0.00 0.00 0.00 4.30
1505 2283 2.869192 GTTCGAAGCTCCATGAATCCTC 59.131 50.000 0.00 0.00 0.00 3.71
1506 2284 2.420687 GGTTCGAAGCTCCATGAATCCT 60.421 50.000 19.71 0.00 0.00 3.24
1507 2285 1.943340 GGTTCGAAGCTCCATGAATCC 59.057 52.381 19.71 0.00 0.00 3.01
1508 2286 1.943340 GGGTTCGAAGCTCCATGAATC 59.057 52.381 25.05 3.25 0.00 2.52
1509 2287 1.743772 CGGGTTCGAAGCTCCATGAAT 60.744 52.381 25.05 0.00 39.00 2.57
1510 2288 0.391130 CGGGTTCGAAGCTCCATGAA 60.391 55.000 25.05 0.00 39.00 2.57
1511 2289 1.218047 CGGGTTCGAAGCTCCATGA 59.782 57.895 25.05 0.00 39.00 3.07
1512 2290 0.673644 AACGGGTTCGAAGCTCCATG 60.674 55.000 25.05 13.10 40.11 3.66
1513 2291 0.673644 CAACGGGTTCGAAGCTCCAT 60.674 55.000 25.05 8.22 40.11 3.41
1514 2292 1.301401 CAACGGGTTCGAAGCTCCA 60.301 57.895 25.05 0.00 40.11 3.86
1515 2293 1.005394 TCAACGGGTTCGAAGCTCC 60.005 57.895 25.05 10.81 40.11 4.70
1516 2294 0.319641 AGTCAACGGGTTCGAAGCTC 60.320 55.000 25.05 14.85 40.11 4.09
1517 2295 0.319641 GAGTCAACGGGTTCGAAGCT 60.320 55.000 25.05 5.29 40.11 3.74
1518 2296 0.319641 AGAGTCAACGGGTTCGAAGC 60.320 55.000 18.86 18.86 40.11 3.86
1519 2297 1.419374 CAGAGTCAACGGGTTCGAAG 58.581 55.000 0.00 0.00 40.11 3.79
1520 2298 0.599204 GCAGAGTCAACGGGTTCGAA 60.599 55.000 0.00 0.00 40.11 3.71
1521 2299 1.006571 GCAGAGTCAACGGGTTCGA 60.007 57.895 0.00 0.00 40.11 3.71
1522 2300 2.027625 GGCAGAGTCAACGGGTTCG 61.028 63.158 0.00 0.00 43.02 3.95
1523 2301 0.951040 CAGGCAGAGTCAACGGGTTC 60.951 60.000 0.00 0.00 0.00 3.62
1524 2302 1.071471 CAGGCAGAGTCAACGGGTT 59.929 57.895 0.00 0.00 0.00 4.11
1525 2303 2.743718 CAGGCAGAGTCAACGGGT 59.256 61.111 0.00 0.00 0.00 5.28
1526 2304 1.903877 ATCCAGGCAGAGTCAACGGG 61.904 60.000 0.00 0.00 0.00 5.28
1527 2305 0.742281 CATCCAGGCAGAGTCAACGG 60.742 60.000 0.00 0.00 0.00 4.44
1528 2306 0.036952 ACATCCAGGCAGAGTCAACG 60.037 55.000 0.00 0.00 0.00 4.10
1529 2307 2.191128 AACATCCAGGCAGAGTCAAC 57.809 50.000 0.00 0.00 0.00 3.18
1530 2308 2.957402 AAACATCCAGGCAGAGTCAA 57.043 45.000 0.00 0.00 0.00 3.18
1531 2309 2.027192 GGTAAACATCCAGGCAGAGTCA 60.027 50.000 0.00 0.00 0.00 3.41
1532 2310 2.633488 GGTAAACATCCAGGCAGAGTC 58.367 52.381 0.00 0.00 0.00 3.36
1533 2311 1.282157 GGGTAAACATCCAGGCAGAGT 59.718 52.381 0.00 0.00 0.00 3.24
1534 2312 1.561542 AGGGTAAACATCCAGGCAGAG 59.438 52.381 0.00 0.00 0.00 3.35
1535 2313 1.281867 CAGGGTAAACATCCAGGCAGA 59.718 52.381 0.00 0.00 0.00 4.26
1536 2314 1.755179 CAGGGTAAACATCCAGGCAG 58.245 55.000 0.00 0.00 0.00 4.85
1537 2315 0.323360 GCAGGGTAAACATCCAGGCA 60.323 55.000 0.00 0.00 0.00 4.75
1538 2316 0.034089 AGCAGGGTAAACATCCAGGC 60.034 55.000 0.00 0.00 0.00 4.85
1539 2317 2.094675 CAAGCAGGGTAAACATCCAGG 58.905 52.381 0.00 0.00 0.00 4.45
1540 2318 1.474077 GCAAGCAGGGTAAACATCCAG 59.526 52.381 0.00 0.00 0.00 3.86
1541 2319 1.075374 AGCAAGCAGGGTAAACATCCA 59.925 47.619 0.00 0.00 0.00 3.41
1542 2320 1.839424 AGCAAGCAGGGTAAACATCC 58.161 50.000 0.00 0.00 0.00 3.51
1543 2321 3.610911 AGTAGCAAGCAGGGTAAACATC 58.389 45.455 0.00 0.00 0.00 3.06
1544 2322 3.009033 TGAGTAGCAAGCAGGGTAAACAT 59.991 43.478 0.00 0.00 0.00 2.71
1545 2323 2.370519 TGAGTAGCAAGCAGGGTAAACA 59.629 45.455 0.00 0.00 0.00 2.83
1546 2324 2.742589 GTGAGTAGCAAGCAGGGTAAAC 59.257 50.000 0.00 0.00 0.00 2.01
1547 2325 2.290071 GGTGAGTAGCAAGCAGGGTAAA 60.290 50.000 0.00 0.00 0.00 2.01
1548 2326 1.278127 GGTGAGTAGCAAGCAGGGTAA 59.722 52.381 0.00 0.00 0.00 2.85
1549 2327 0.902531 GGTGAGTAGCAAGCAGGGTA 59.097 55.000 0.00 0.00 0.00 3.69
1550 2328 1.679898 GGTGAGTAGCAAGCAGGGT 59.320 57.895 0.00 0.00 0.00 4.34
1551 2329 1.448540 CGGTGAGTAGCAAGCAGGG 60.449 63.158 0.00 0.00 0.00 4.45
1552 2330 0.320771 AACGGTGAGTAGCAAGCAGG 60.321 55.000 0.00 0.00 0.00 4.85
1553 2331 1.071605 GAACGGTGAGTAGCAAGCAG 58.928 55.000 0.00 0.00 0.00 4.24
1554 2332 0.679505 AGAACGGTGAGTAGCAAGCA 59.320 50.000 0.00 0.00 0.00 3.91
1555 2333 1.461127 CAAGAACGGTGAGTAGCAAGC 59.539 52.381 0.00 0.00 0.00 4.01
1556 2334 2.476619 CACAAGAACGGTGAGTAGCAAG 59.523 50.000 0.00 0.00 38.54 4.01
1557 2335 2.159014 ACACAAGAACGGTGAGTAGCAA 60.159 45.455 0.00 0.00 39.53 3.91
1558 2336 1.411246 ACACAAGAACGGTGAGTAGCA 59.589 47.619 0.00 0.00 39.53 3.49
1559 2337 2.150397 ACACAAGAACGGTGAGTAGC 57.850 50.000 0.00 0.00 39.53 3.58
1560 2338 3.978687 AGAACACAAGAACGGTGAGTAG 58.021 45.455 0.00 0.00 39.53 2.57
1561 2339 4.116961 CAAGAACACAAGAACGGTGAGTA 58.883 43.478 0.00 0.00 39.53 2.59
1562 2340 2.936498 CAAGAACACAAGAACGGTGAGT 59.064 45.455 0.00 0.00 39.53 3.41
1563 2341 2.936498 ACAAGAACACAAGAACGGTGAG 59.064 45.455 0.00 0.00 39.53 3.51
1564 2342 2.980568 ACAAGAACACAAGAACGGTGA 58.019 42.857 0.00 0.00 39.53 4.02
1565 2343 3.126171 TCAACAAGAACACAAGAACGGTG 59.874 43.478 0.00 0.00 41.95 4.94
1566 2344 3.340034 TCAACAAGAACACAAGAACGGT 58.660 40.909 0.00 0.00 0.00 4.83
1567 2345 4.035091 TCATCAACAAGAACACAAGAACGG 59.965 41.667 0.00 0.00 0.00 4.44
1568 2346 5.155509 TCATCAACAAGAACACAAGAACG 57.844 39.130 0.00 0.00 0.00 3.95
1569 2347 7.195646 TGATTCATCAACAAGAACACAAGAAC 58.804 34.615 0.00 0.00 33.08 3.01
1570 2348 7.332213 TGATTCATCAACAAGAACACAAGAA 57.668 32.000 0.00 0.00 33.08 2.52
1571 2349 6.940831 TGATTCATCAACAAGAACACAAGA 57.059 33.333 0.00 0.00 33.08 3.02
1572 2350 6.089016 GCATGATTCATCAACAAGAACACAAG 59.911 38.462 0.00 0.00 40.69 3.16
1573 2351 5.921976 GCATGATTCATCAACAAGAACACAA 59.078 36.000 0.00 0.00 40.69 3.33
1574 2352 5.463286 GCATGATTCATCAACAAGAACACA 58.537 37.500 0.00 0.00 40.69 3.72
1575 2353 4.860907 GGCATGATTCATCAACAAGAACAC 59.139 41.667 0.00 0.00 40.69 3.32
1576 2354 4.523558 TGGCATGATTCATCAACAAGAACA 59.476 37.500 0.00 0.00 40.69 3.18
1577 2355 5.063180 TGGCATGATTCATCAACAAGAAC 57.937 39.130 0.00 0.00 40.69 3.01
1578 2356 5.725325 TTGGCATGATTCATCAACAAGAA 57.275 34.783 0.00 0.00 40.69 2.52
1579 2357 5.163488 GGATTGGCATGATTCATCAACAAGA 60.163 40.000 0.00 0.00 40.69 3.02
1580 2358 5.047847 GGATTGGCATGATTCATCAACAAG 58.952 41.667 0.00 0.00 40.69 3.16
1581 2359 4.712829 AGGATTGGCATGATTCATCAACAA 59.287 37.500 0.00 3.34 40.69 2.83
1582 2360 4.098807 CAGGATTGGCATGATTCATCAACA 59.901 41.667 0.00 0.00 40.69 3.33
1583 2361 4.340097 TCAGGATTGGCATGATTCATCAAC 59.660 41.667 0.00 0.00 40.69 3.18
1584 2362 4.538738 TCAGGATTGGCATGATTCATCAA 58.461 39.130 0.00 0.00 40.69 2.57
1585 2363 4.173290 TCAGGATTGGCATGATTCATCA 57.827 40.909 0.00 0.00 41.70 3.07
1592 2370 7.438564 CAATTATTGAATCAGGATTGGCATGA 58.561 34.615 0.00 0.00 42.12 3.07
1593 2371 6.649141 CCAATTATTGAATCAGGATTGGCATG 59.351 38.462 15.96 0.00 37.70 4.06
1594 2372 6.555738 TCCAATTATTGAATCAGGATTGGCAT 59.444 34.615 20.08 0.00 41.90 4.40
1595 2373 5.898397 TCCAATTATTGAATCAGGATTGGCA 59.102 36.000 20.08 11.90 41.90 4.92
1596 2374 6.409524 TCCAATTATTGAATCAGGATTGGC 57.590 37.500 20.08 0.00 41.90 4.52
1597 2375 7.310237 GGGATCCAATTATTGAATCAGGATTGG 60.310 40.741 15.23 19.39 42.94 3.16
1598 2376 7.310237 GGGGATCCAATTATTGAATCAGGATTG 60.310 40.741 15.23 5.12 38.78 2.67
1599 2377 6.727697 GGGGATCCAATTATTGAATCAGGATT 59.272 38.462 15.23 0.00 38.78 3.01
1600 2378 6.183361 TGGGGATCCAATTATTGAATCAGGAT 60.183 38.462 15.23 0.00 40.18 3.24
1601 2379 5.135876 TGGGGATCCAATTATTGAATCAGGA 59.864 40.000 15.23 0.00 40.73 3.86
1602 2380 5.244626 GTGGGGATCCAATTATTGAATCAGG 59.755 44.000 15.23 0.00 46.04 3.86
1603 2381 6.073314 AGTGGGGATCCAATTATTGAATCAG 58.927 40.000 15.23 0.00 46.04 2.90
1604 2382 6.029492 AGTGGGGATCCAATTATTGAATCA 57.971 37.500 15.23 0.00 46.04 2.57
1614 2392 3.979501 ATTGCTAAGTGGGGATCCAAT 57.020 42.857 15.23 0.00 46.04 3.16
1615 2393 4.665009 AGATATTGCTAAGTGGGGATCCAA 59.335 41.667 15.23 0.00 46.04 3.53
1616 2394 4.242811 AGATATTGCTAAGTGGGGATCCA 58.757 43.478 15.23 0.00 41.58 3.41
1617 2395 4.287067 TGAGATATTGCTAAGTGGGGATCC 59.713 45.833 1.92 1.92 0.00 3.36
1618 2396 5.486526 CTGAGATATTGCTAAGTGGGGATC 58.513 45.833 0.00 0.00 0.00 3.36
1619 2397 4.263243 GCTGAGATATTGCTAAGTGGGGAT 60.263 45.833 0.00 0.00 0.00 3.85
1620 2398 3.071602 GCTGAGATATTGCTAAGTGGGGA 59.928 47.826 0.00 0.00 0.00 4.81
1621 2399 3.406764 GCTGAGATATTGCTAAGTGGGG 58.593 50.000 0.00 0.00 0.00 4.96
1622 2400 3.181451 TGGCTGAGATATTGCTAAGTGGG 60.181 47.826 0.00 0.00 0.00 4.61
1623 2401 4.063689 CTGGCTGAGATATTGCTAAGTGG 58.936 47.826 0.00 0.00 0.00 4.00
1624 2402 4.701765 ACTGGCTGAGATATTGCTAAGTG 58.298 43.478 0.00 0.00 0.00 3.16
1625 2403 5.365021 AACTGGCTGAGATATTGCTAAGT 57.635 39.130 0.00 0.00 0.00 2.24
1626 2404 7.094890 CCATAAACTGGCTGAGATATTGCTAAG 60.095 40.741 0.00 0.00 38.47 2.18
1627 2405 6.712095 CCATAAACTGGCTGAGATATTGCTAA 59.288 38.462 0.00 0.00 38.47 3.09
1628 2406 6.233434 CCATAAACTGGCTGAGATATTGCTA 58.767 40.000 0.00 0.00 38.47 3.49
1629 2407 5.068636 CCATAAACTGGCTGAGATATTGCT 58.931 41.667 0.00 0.00 38.47 3.91
1630 2408 5.368256 CCATAAACTGGCTGAGATATTGC 57.632 43.478 0.00 0.00 38.47 3.56
1913 2694 8.615878 TTATGAAGTTGCTAAACACACATACT 57.384 30.769 0.00 0.00 38.88 2.12
2002 2786 9.573133 TTAGTTCTTGAAGAGCTTTTCTTTTTG 57.427 29.630 16.58 4.38 46.12 2.44
2104 3014 8.156820 TGAACAATCGATACATTTGAGGGATAT 58.843 33.333 0.00 0.00 0.00 1.63
2159 3069 2.123342 CGCCTCAATAGAAGAGAAGCG 58.877 52.381 0.00 0.00 37.41 4.68
2165 3075 6.948886 AGAGTATATTCCGCCTCAATAGAAGA 59.051 38.462 0.00 0.00 0.00 2.87
2218 3128 4.950744 GTGTCACATGCTTGGCAC 57.049 55.556 5.42 5.42 44.40 5.01
2247 3157 6.655078 ACTAATGTTCATTGAAAAGGCAGT 57.345 33.333 0.00 0.00 0.00 4.40
2294 3204 7.601856 TGAAAGGATAAGTAGTTTGCAAATGG 58.398 34.615 16.21 0.00 0.00 3.16
2311 3221 4.061657 TCCCCCAAGGAATATGAAAGGAT 58.938 43.478 0.00 0.00 43.78 3.24
2348 3258 5.123820 CCGATTTGTAATGCGGGAATATCAT 59.876 40.000 0.00 0.00 40.08 2.45
2360 3270 4.165779 GGTTTCAGCACCGATTTGTAATG 58.834 43.478 0.00 0.00 0.00 1.90
2361 3271 3.823873 TGGTTTCAGCACCGATTTGTAAT 59.176 39.130 0.00 0.00 40.09 1.89
2384 3294 5.910614 TCACATCAGACTAATGTCCTCATG 58.089 41.667 0.00 0.00 43.91 3.07
2386 3296 5.337571 GGTTCACATCAGACTAATGTCCTCA 60.338 44.000 0.00 0.00 43.91 3.86
2387 3297 5.112686 GGTTCACATCAGACTAATGTCCTC 58.887 45.833 0.00 0.00 43.91 3.71
2399 3309 6.250819 GTGAATGTTAATCGGTTCACATCAG 58.749 40.000 8.60 0.00 45.90 2.90
2411 3327 7.546667 ACTGGCAAATTGATGTGAATGTTAATC 59.453 33.333 0.00 0.00 0.00 1.75
2430 3346 6.667414 AGAATTATCCCAATTAACACTGGCAA 59.333 34.615 0.00 0.00 0.00 4.52
2458 3374 8.112822 TCAAATTTCCTCATATGGTTTCACCTA 58.887 33.333 2.13 0.00 39.58 3.08
2461 3377 7.035612 GGTCAAATTTCCTCATATGGTTTCAC 58.964 38.462 2.13 0.00 0.00 3.18
2490 3406 0.320374 AACGTGCTGCTGCTAGGTAA 59.680 50.000 17.00 0.00 40.48 2.85
2503 3419 3.621794 GAATCCTGATGCATAAACGTGC 58.378 45.455 0.00 0.00 45.25 5.34
2551 3467 9.160496 CTCTTCTCATACAAGTTCTAAAGCAAT 57.840 33.333 0.00 0.00 0.00 3.56
2562 3478 4.653341 CCCCTGATCTCTTCTCATACAAGT 59.347 45.833 0.00 0.00 0.00 3.16
2566 3482 4.479158 ACTCCCCTGATCTCTTCTCATAC 58.521 47.826 0.00 0.00 0.00 2.39
2603 3519 2.293122 GACTTGCACCAGTAACAATGCA 59.707 45.455 0.00 0.00 45.94 3.96
2609 3525 3.007635 GGTATGGACTTGCACCAGTAAC 58.992 50.000 0.69 0.00 40.89 2.50
2669 3585 6.436843 AGTTTACTGTTTGAGAAACCACAG 57.563 37.500 0.00 0.00 42.08 3.66
2704 3620 9.342308 GAATTTCAGACCCATAACAATAGATGA 57.658 33.333 0.00 0.00 0.00 2.92
2709 3625 8.058235 TGATGGAATTTCAGACCCATAACAATA 58.942 33.333 0.00 0.00 39.33 1.90
2764 3680 7.819415 TCGGCATTCTTCTTATATAGACATTGG 59.181 37.037 0.00 0.00 30.90 3.16
2791 3707 4.518970 TGGTTTGTACATCTTGAGGCTTTC 59.481 41.667 0.00 0.00 0.00 2.62
2795 3711 2.488153 GGTGGTTTGTACATCTTGAGGC 59.512 50.000 0.00 0.00 0.00 4.70
2796 3712 3.081804 GGGTGGTTTGTACATCTTGAGG 58.918 50.000 0.00 0.00 0.00 3.86
2821 3737 3.649023 TCCTAGTTGTTTAGTCAGGCCAA 59.351 43.478 5.01 0.00 0.00 4.52
2858 3774 7.104290 GGCTAACTTGGTTCAGTTTCTATAGT 58.896 38.462 0.00 0.00 38.07 2.12
2874 3790 3.085952 TGATCCCTTTGGGCTAACTTG 57.914 47.619 0.00 0.00 43.94 3.16
2892 3809 5.885352 TCATGTTGGAACTTCAGAGTTTTGA 59.115 36.000 0.00 0.00 45.88 2.69
2894 3811 5.220854 CGTCATGTTGGAACTTCAGAGTTTT 60.221 40.000 0.00 0.00 45.88 2.43
2911 3828 4.023536 GGTTACAAACAATGGTCGTCATGT 60.024 41.667 0.00 0.00 35.99 3.21
2918 3835 3.562557 ACGTCAGGTTACAAACAATGGTC 59.437 43.478 0.00 0.00 0.00 4.02
2922 3839 2.946329 TGCACGTCAGGTTACAAACAAT 59.054 40.909 0.00 0.00 0.00 2.71
2931 3848 4.578928 AGAAATTACTTTGCACGTCAGGTT 59.421 37.500 0.00 0.00 0.00 3.50
2942 3859 6.705381 TGGCACCATTTTCAGAAATTACTTTG 59.295 34.615 0.00 0.00 33.25 2.77
2946 3863 4.627035 GCTGGCACCATTTTCAGAAATTAC 59.373 41.667 0.00 0.00 33.25 1.89
2975 3892 0.877071 AACTTGAAGGCATGTGCGAG 59.123 50.000 0.00 0.00 43.26 5.03
2976 3893 0.874390 GAACTTGAAGGCATGTGCGA 59.126 50.000 0.00 0.00 43.26 5.10
2977 3894 0.592637 TGAACTTGAAGGCATGTGCG 59.407 50.000 0.00 0.00 43.26 5.34
2987 3904 4.776349 TGTGAGGTTAGCTTGAACTTGAA 58.224 39.130 0.00 0.00 0.00 2.69
2988 3905 4.415881 TGTGAGGTTAGCTTGAACTTGA 57.584 40.909 0.00 0.00 0.00 3.02
2989 3906 5.455392 CAATGTGAGGTTAGCTTGAACTTG 58.545 41.667 0.00 0.00 0.00 3.16
2990 3907 4.022849 GCAATGTGAGGTTAGCTTGAACTT 60.023 41.667 0.00 0.00 0.00 2.66
2991 3908 3.503748 GCAATGTGAGGTTAGCTTGAACT 59.496 43.478 0.00 0.00 0.00 3.01
2992 3909 3.667960 CGCAATGTGAGGTTAGCTTGAAC 60.668 47.826 0.00 0.00 0.00 3.18
2998 3915 1.599542 GGATCGCAATGTGAGGTTAGC 59.400 52.381 2.12 0.00 0.00 3.09
3024 3941 2.283388 TACTCGCCTGTTCCCGGT 60.283 61.111 0.00 0.00 0.00 5.28
3156 4073 0.982852 TCCTGTGTATGGCTCCAGGG 60.983 60.000 4.82 0.00 43.77 4.45
3187 4104 4.749245 AGTAAATGAACGGCTGTTGAAG 57.251 40.909 17.49 0.00 38.78 3.02
3188 4105 4.576873 TCAAGTAAATGAACGGCTGTTGAA 59.423 37.500 17.49 4.06 38.78 2.69
3189 4106 4.130857 TCAAGTAAATGAACGGCTGTTGA 58.869 39.130 17.49 8.12 38.78 3.18
3190 4107 4.481930 TCAAGTAAATGAACGGCTGTTG 57.518 40.909 17.49 0.00 38.78 3.33
3244 4162 6.614694 TGGTACCATTCAGTATGTTGTACT 57.385 37.500 11.60 0.00 34.72 2.73
3247 4165 5.815581 ACATGGTACCATTCAGTATGTTGT 58.184 37.500 25.25 14.09 33.61 3.32
3248 4166 6.183360 GGAACATGGTACCATTCAGTATGTTG 60.183 42.308 25.25 13.43 33.61 3.33
3284 4202 0.107312 CCATCAGGGTCAGGCTGAAG 60.107 60.000 20.62 9.79 0.00 3.02
3285 4203 1.993653 CCATCAGGGTCAGGCTGAA 59.006 57.895 20.62 3.08 0.00 3.02
3349 4267 2.815589 GCCTTCTCCCTTGAACACATGT 60.816 50.000 0.00 0.00 0.00 3.21
3424 4342 0.906756 TTCAGGAGGAGGCAGGAGTG 60.907 60.000 0.00 0.00 0.00 3.51
3448 4366 1.470632 CCAGATGACTCGAGAACTGGC 60.471 57.143 21.68 3.13 38.40 4.85
3449 4367 2.095461 TCCAGATGACTCGAGAACTGG 58.905 52.381 27.76 27.76 44.02 4.00
3450 4368 3.379688 TCATCCAGATGACTCGAGAACTG 59.620 47.826 21.68 19.29 42.42 3.16
3451 4369 3.625853 TCATCCAGATGACTCGAGAACT 58.374 45.455 21.68 9.29 42.42 3.01
3520 4446 3.303881 TCATCCACACAACTTCGAGAG 57.696 47.619 0.00 0.00 0.00 3.20
3623 4549 4.439305 TGGCAATGCAAGTTACAAGATC 57.561 40.909 7.79 0.00 0.00 2.75
3632 4558 1.965643 ACAGTTCATGGCAATGCAAGT 59.034 42.857 7.79 0.00 33.47 3.16
3633 4559 2.029739 TCACAGTTCATGGCAATGCAAG 60.030 45.455 7.79 0.00 33.47 4.01
3634 4560 1.962100 TCACAGTTCATGGCAATGCAA 59.038 42.857 7.79 0.00 33.47 4.08
3635 4561 1.270274 GTCACAGTTCATGGCAATGCA 59.730 47.619 7.79 0.00 33.47 3.96
3636 4562 1.403249 GGTCACAGTTCATGGCAATGC 60.403 52.381 0.00 0.00 33.47 3.56
3637 4563 2.165167 AGGTCACAGTTCATGGCAATG 58.835 47.619 0.00 0.00 34.88 2.82
3638 4564 2.592102 AGGTCACAGTTCATGGCAAT 57.408 45.000 0.00 0.00 0.00 3.56
3639 4565 3.500448 TTAGGTCACAGTTCATGGCAA 57.500 42.857 0.00 0.00 0.00 4.52
3640 4566 3.264193 AGATTAGGTCACAGTTCATGGCA 59.736 43.478 0.00 0.00 0.00 4.92
3641 4567 3.624861 CAGATTAGGTCACAGTTCATGGC 59.375 47.826 0.00 0.00 0.00 4.40
3642 4568 4.836825 ACAGATTAGGTCACAGTTCATGG 58.163 43.478 0.00 0.00 0.00 3.66
3643 4569 5.062683 CGAACAGATTAGGTCACAGTTCATG 59.937 44.000 0.00 0.00 36.24 3.07
3644 4570 5.171476 CGAACAGATTAGGTCACAGTTCAT 58.829 41.667 0.00 0.00 36.24 2.57
3645 4571 4.556233 CGAACAGATTAGGTCACAGTTCA 58.444 43.478 0.00 0.00 36.24 3.18
3646 4572 3.927142 CCGAACAGATTAGGTCACAGTTC 59.073 47.826 0.00 0.00 34.66 3.01
3647 4573 3.323979 ACCGAACAGATTAGGTCACAGTT 59.676 43.478 0.00 0.00 39.42 3.16
3648 4574 2.897969 ACCGAACAGATTAGGTCACAGT 59.102 45.455 0.00 0.00 39.42 3.55
3649 4575 3.594603 ACCGAACAGATTAGGTCACAG 57.405 47.619 0.00 0.00 39.42 3.66
3654 4580 4.822026 CTTTCAGACCGAACAGATTAGGT 58.178 43.478 0.00 0.00 45.63 3.08
3677 4603 1.609580 TCCAAAACAGGATCCGGAACG 60.610 52.381 19.55 0.00 42.40 3.95
3678 4604 2.194201 TCCAAAACAGGATCCGGAAC 57.806 50.000 19.55 5.41 31.23 3.62
3682 4608 5.293569 GTGTATAGTTCCAAAACAGGATCCG 59.706 44.000 5.98 3.99 37.56 4.18
3684 4610 5.220605 GCGTGTATAGTTCCAAAACAGGATC 60.221 44.000 0.00 0.00 37.56 3.36
3685 4611 4.634443 GCGTGTATAGTTCCAAAACAGGAT 59.366 41.667 0.00 0.00 37.56 3.24
3688 4614 4.688879 TCAGCGTGTATAGTTCCAAAACAG 59.311 41.667 0.00 0.00 37.88 3.16
3703 4668 3.255888 TGTGATTAGAGAGTTCAGCGTGT 59.744 43.478 0.00 0.00 0.00 4.49
3707 4672 5.293079 GGTCAATGTGATTAGAGAGTTCAGC 59.707 44.000 0.00 0.00 0.00 4.26
3708 4673 6.401394 TGGTCAATGTGATTAGAGAGTTCAG 58.599 40.000 0.00 0.00 0.00 3.02
3765 4730 6.952773 TTGCAAGACCACAAAACTACTTAT 57.047 33.333 0.00 0.00 0.00 1.73
3766 4731 6.952773 ATTGCAAGACCACAAAACTACTTA 57.047 33.333 4.94 0.00 0.00 2.24
3767 4732 5.852282 ATTGCAAGACCACAAAACTACTT 57.148 34.783 4.94 0.00 0.00 2.24
3768 4733 8.807948 ATATATTGCAAGACCACAAAACTACT 57.192 30.769 4.94 0.00 0.00 2.57
3769 4734 9.931210 GTATATATTGCAAGACCACAAAACTAC 57.069 33.333 4.94 0.00 0.00 2.73
3771 4736 8.807948 AGTATATATTGCAAGACCACAAAACT 57.192 30.769 4.94 0.00 0.00 2.66
3774 4739 8.710239 TCCTAGTATATATTGCAAGACCACAAA 58.290 33.333 4.94 0.00 0.00 2.83
3775 4740 8.257602 TCCTAGTATATATTGCAAGACCACAA 57.742 34.615 4.94 0.00 0.00 3.33
3776 4741 7.849322 TCCTAGTATATATTGCAAGACCACA 57.151 36.000 4.94 0.00 0.00 4.17
3777 4742 8.148351 TGTTCCTAGTATATATTGCAAGACCAC 58.852 37.037 4.94 0.00 0.00 4.16
3778 4743 8.257602 TGTTCCTAGTATATATTGCAAGACCA 57.742 34.615 4.94 0.00 0.00 4.02
3779 4744 8.585881 TCTGTTCCTAGTATATATTGCAAGACC 58.414 37.037 4.94 0.00 0.00 3.85
3802 4767 2.746362 GTCAAGGGAGTTGAGCATTCTG 59.254 50.000 0.00 0.00 46.18 3.02
3821 4786 9.206870 GGATTGAATCAAGAGATGAGATTAGTC 57.793 37.037 7.56 0.00 42.53 2.59
3829 4794 4.202295 CGGGAGGATTGAATCAAGAGATGA 60.202 45.833 7.56 0.00 43.67 2.92
3836 4801 2.026356 TGAAGCGGGAGGATTGAATCAA 60.026 45.455 7.56 0.00 0.00 2.57
3852 4817 0.096628 CTGCAATGACGCTCTGAAGC 59.903 55.000 0.00 0.00 45.56 3.86
3857 4822 1.674221 GGAAGACTGCAATGACGCTCT 60.674 52.381 0.00 0.00 0.00 4.09
3876 4847 1.991430 CGTCAGCTGAATCGAACGG 59.009 57.895 20.19 0.00 0.00 4.44
3890 4861 2.291043 GGGGGAGGAGAAAGCGTCA 61.291 63.158 0.00 0.00 0.00 4.35
3990 4967 3.672295 CTTCTCTGGCAGCGTCCCC 62.672 68.421 10.34 0.00 0.00 4.81
4117 5094 1.457738 CTCATTACGACGAGCTCACG 58.542 55.000 22.62 22.62 39.31 4.35
4124 5101 1.170442 TGTCTGGCTCATTACGACGA 58.830 50.000 0.00 0.00 0.00 4.20
4125 5102 1.990799 TTGTCTGGCTCATTACGACG 58.009 50.000 0.00 0.00 0.00 5.12
4126 5103 3.553511 CAGATTGTCTGGCTCATTACGAC 59.446 47.826 0.00 0.00 40.71 4.34
4131 5108 2.366533 CAGCAGATTGTCTGGCTCATT 58.633 47.619 8.85 0.00 44.43 2.57
4289 5266 1.337167 CGACACAGATCTGCAGGTTCA 60.337 52.381 22.83 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.