Multiple sequence alignment - TraesCS6B01G360400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G360400 chr6B 100.000 5272 0 0 1 5272 632240125 632245396 0.000000e+00 9736.0
1 TraesCS6B01G360400 chr6B 95.485 908 32 4 4365 5272 265018039 265017141 0.000000e+00 1441.0
2 TraesCS6B01G360400 chr6B 95.033 906 37 6 4370 5272 616666466 616665566 0.000000e+00 1417.0
3 TraesCS6B01G360400 chr6B 91.206 887 65 8 2601 3474 632503443 632504329 0.000000e+00 1194.0
4 TraesCS6B01G360400 chr6B 84.304 962 112 30 2547 3483 632787026 632787973 0.000000e+00 904.0
5 TraesCS6B01G360400 chr6B 84.642 879 104 23 2618 3482 632565255 632566116 0.000000e+00 846.0
6 TraesCS6B01G360400 chr6B 86.305 701 86 9 2788 3482 632304752 632305448 0.000000e+00 754.0
7 TraesCS6B01G360400 chr6B 93.519 216 10 3 1122 1337 632419924 632420135 8.520000e-83 318.0
8 TraesCS6B01G360400 chr6B 93.301 209 13 1 1130 1337 632786185 632786393 1.840000e-79 307.0
9 TraesCS6B01G360400 chr6B 90.435 230 18 3 1122 1350 632564051 632564277 3.090000e-77 300.0
10 TraesCS6B01G360400 chr6B 89.700 233 23 1 1119 1350 632287213 632287445 3.990000e-76 296.0
11 TraesCS6B01G360400 chr6B 79.381 291 40 11 3739 4026 632788012 632788285 2.510000e-43 187.0
12 TraesCS6B01G360400 chr6B 80.000 215 24 10 3741 3950 632504376 632504576 1.980000e-29 141.0
13 TraesCS6B01G360400 chr6B 94.915 59 3 0 664 722 632444343 632444401 5.620000e-15 93.5
14 TraesCS6B01G360400 chr6B 92.063 63 4 1 439 500 632781361 632781423 2.620000e-13 87.9
15 TraesCS6B01G360400 chr6D 92.686 1750 70 20 2618 4331 419285940 419287667 0.000000e+00 2470.0
16 TraesCS6B01G360400 chr6D 87.290 1369 94 33 11 1344 419283237 419284560 0.000000e+00 1491.0
17 TraesCS6B01G360400 chr6D 90.449 869 69 7 2620 3474 419614588 419615456 0.000000e+00 1133.0
18 TraesCS6B01G360400 chr6D 84.084 955 109 32 2547 3483 419748225 419749154 0.000000e+00 881.0
19 TraesCS6B01G360400 chr6D 83.885 906 108 28 2578 3474 419484872 419485748 0.000000e+00 830.0
20 TraesCS6B01G360400 chr6D 84.073 879 110 22 2618 3483 419657288 419658149 0.000000e+00 821.0
21 TraesCS6B01G360400 chr6D 86.231 719 88 9 2772 3482 419447715 419448430 0.000000e+00 769.0
22 TraesCS6B01G360400 chr6D 93.088 217 11 3 1122 1338 419482484 419482696 1.100000e-81 315.0
23 TraesCS6B01G360400 chr6D 79.121 273 38 11 3756 4027 419485834 419486088 2.520000e-38 171.0
24 TraesCS6B01G360400 chr6D 80.000 255 31 12 3774 4021 419615543 419615784 2.520000e-38 171.0
25 TraesCS6B01G360400 chr6A 92.343 1750 83 19 2617 4331 562704455 562706188 0.000000e+00 2442.0
26 TraesCS6B01G360400 chr6A 90.629 875 62 11 2620 3474 562813446 562814320 0.000000e+00 1144.0
27 TraesCS6B01G360400 chr6A 91.521 802 39 9 617 1404 562702803 562703589 0.000000e+00 1077.0
28 TraesCS6B01G360400 chr6A 95.500 200 9 0 1139 1338 562918870 562919069 2.370000e-83 320.0
29 TraesCS6B01G360400 chr6A 93.056 216 11 3 1122 1337 562794886 562795097 3.960000e-81 313.0
30 TraesCS6B01G360400 chr6A 81.295 278 29 15 3756 4027 562762975 562763235 2.490000e-48 204.0
31 TraesCS6B01G360400 chr6A 79.310 261 36 12 3768 4022 562814385 562814633 3.270000e-37 167.0
32 TraesCS6B01G360400 chr6A 90.083 121 8 4 2492 2609 562704295 562704414 2.540000e-33 154.0
33 TraesCS6B01G360400 chr6A 76.950 282 46 15 3756 4027 562797645 562797917 5.500000e-30 143.0
34 TraesCS6B01G360400 chr6A 86.029 136 13 5 2578 2708 562796675 562796809 1.980000e-29 141.0
35 TraesCS6B01G360400 chr3B 96.154 910 28 6 4365 5272 792266808 792265904 0.000000e+00 1480.0
36 TraesCS6B01G360400 chr3B 95.254 906 35 5 4368 5272 163157740 163156842 0.000000e+00 1428.0
37 TraesCS6B01G360400 chr3B 84.242 165 26 0 1410 1574 760608538 760608702 1.520000e-35 161.0
38 TraesCS6B01G360400 chr4A 96.145 908 25 5 4365 5272 712454089 712454986 0.000000e+00 1474.0
39 TraesCS6B01G360400 chr7B 95.060 911 34 5 4371 5272 652142575 652143483 0.000000e+00 1423.0
40 TraesCS6B01G360400 chr7B 84.524 168 25 1 1410 1576 10954958 10955125 1.170000e-36 165.0
41 TraesCS6B01G360400 chr7B 83.007 153 26 0 1413 1565 246001159 246001311 7.120000e-29 139.0
42 TraesCS6B01G360400 chr2B 94.829 909 39 4 4365 5272 197574815 197575716 0.000000e+00 1411.0
43 TraesCS6B01G360400 chr2B 94.835 910 34 8 4366 5272 90635246 90634347 0.000000e+00 1408.0
44 TraesCS6B01G360400 chr2B 82.099 162 28 1 1404 1565 9718134 9717974 2.560000e-28 137.0
45 TraesCS6B01G360400 chr7A 94.072 911 40 7 4365 5272 10257255 10256356 0.000000e+00 1371.0
46 TraesCS6B01G360400 chr1A 83.240 179 25 5 1406 1582 10141986 10142161 5.460000e-35 159.0
47 TraesCS6B01G360400 chr3A 83.333 162 27 0 1413 1574 610544600 610544761 3.290000e-32 150.0
48 TraesCS6B01G360400 chr1B 83.537 164 22 5 1412 1574 44588231 44588390 1.180000e-31 148.0
49 TraesCS6B01G360400 chr3D 82.143 168 28 2 1412 1579 549376549 549376384 5.500000e-30 143.0
50 TraesCS6B01G360400 chr5A 81.548 168 28 3 1412 1578 482440368 482440533 9.210000e-28 135.0
51 TraesCS6B01G360400 chr7D 90.698 43 0 3 1812 1853 596233577 596233538 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G360400 chr6B 632240125 632245396 5271 False 9736.000000 9736 100.000000 1 5272 1 chr6B.!!$F1 5271
1 TraesCS6B01G360400 chr6B 265017141 265018039 898 True 1441.000000 1441 95.485000 4365 5272 1 chr6B.!!$R1 907
2 TraesCS6B01G360400 chr6B 616665566 616666466 900 True 1417.000000 1417 95.033000 4370 5272 1 chr6B.!!$R2 902
3 TraesCS6B01G360400 chr6B 632304752 632305448 696 False 754.000000 754 86.305000 2788 3482 1 chr6B.!!$F3 694
4 TraesCS6B01G360400 chr6B 632503443 632504576 1133 False 667.500000 1194 85.603000 2601 3950 2 chr6B.!!$F7 1349
5 TraesCS6B01G360400 chr6B 632564051 632566116 2065 False 573.000000 846 87.538500 1122 3482 2 chr6B.!!$F8 2360
6 TraesCS6B01G360400 chr6B 632786185 632788285 2100 False 466.000000 904 85.662000 1130 4026 3 chr6B.!!$F9 2896
7 TraesCS6B01G360400 chr6D 419283237 419287667 4430 False 1980.500000 2470 89.988000 11 4331 2 chr6D.!!$F4 4320
8 TraesCS6B01G360400 chr6D 419748225 419749154 929 False 881.000000 881 84.084000 2547 3483 1 chr6D.!!$F3 936
9 TraesCS6B01G360400 chr6D 419657288 419658149 861 False 821.000000 821 84.073000 2618 3483 1 chr6D.!!$F2 865
10 TraesCS6B01G360400 chr6D 419447715 419448430 715 False 769.000000 769 86.231000 2772 3482 1 chr6D.!!$F1 710
11 TraesCS6B01G360400 chr6D 419614588 419615784 1196 False 652.000000 1133 85.224500 2620 4021 2 chr6D.!!$F6 1401
12 TraesCS6B01G360400 chr6D 419482484 419486088 3604 False 438.666667 830 85.364667 1122 4027 3 chr6D.!!$F5 2905
13 TraesCS6B01G360400 chr6A 562702803 562706188 3385 False 1224.333333 2442 91.315667 617 4331 3 chr6A.!!$F3 3714
14 TraesCS6B01G360400 chr6A 562813446 562814633 1187 False 655.500000 1144 84.969500 2620 4022 2 chr6A.!!$F5 1402
15 TraesCS6B01G360400 chr3B 792265904 792266808 904 True 1480.000000 1480 96.154000 4365 5272 1 chr3B.!!$R2 907
16 TraesCS6B01G360400 chr3B 163156842 163157740 898 True 1428.000000 1428 95.254000 4368 5272 1 chr3B.!!$R1 904
17 TraesCS6B01G360400 chr4A 712454089 712454986 897 False 1474.000000 1474 96.145000 4365 5272 1 chr4A.!!$F1 907
18 TraesCS6B01G360400 chr7B 652142575 652143483 908 False 1423.000000 1423 95.060000 4371 5272 1 chr7B.!!$F3 901
19 TraesCS6B01G360400 chr2B 197574815 197575716 901 False 1411.000000 1411 94.829000 4365 5272 1 chr2B.!!$F1 907
20 TraesCS6B01G360400 chr2B 90634347 90635246 899 True 1408.000000 1408 94.835000 4366 5272 1 chr2B.!!$R2 906
21 TraesCS6B01G360400 chr7A 10256356 10257255 899 True 1371.000000 1371 94.072000 4365 5272 1 chr7A.!!$R1 907

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
146 147 0.100325 AAGAGATGCGAGCGTGAGAG 59.900 55.0 0.00 0.0 0.00 3.20 F
1734 1955 0.031585 GTCACCACACACGCAGAGTA 59.968 55.0 0.00 0.0 0.00 2.59 F
1735 1956 0.031585 TCACCACACACGCAGAGTAC 59.968 55.0 0.00 0.0 0.00 2.73 F
1948 2342 0.031994 CTTTTTGCGGGGTGTTCCAG 59.968 55.0 0.00 0.0 37.22 3.86 F
2473 3773 0.036732 TGATTGGTCACTGGTGGAGC 59.963 55.0 0.70 0.0 0.00 4.70 F
3983 6160 0.110192 GCAAGTTCAACGGCAGCTAC 60.110 55.0 2.73 0.0 0.00 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1929 2323 0.031994 CTGGAACACCCCGCAAAAAG 59.968 55.000 0.0 0.0 0.00 2.27 R
2614 4638 0.036388 AGTCCCCTGCACATGTTACG 60.036 55.000 0.0 0.0 0.00 3.18 R
2722 4785 0.759060 ATGGATGGATGGACGACGGA 60.759 55.000 0.0 0.0 0.00 4.69 R
3719 5853 0.765510 AATACTTCCTCCATCCGGGC 59.234 55.000 0.0 0.0 36.21 6.13 R
4194 6381 1.135939 CACGTACATGCGGTCTCGA 59.864 57.895 0.0 0.0 39.00 4.04 R
5040 7241 3.051803 TCTCTCCCTCTCTCTCTCTCTCT 60.052 52.174 0.0 0.0 0.00 3.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.511600 GACGCAATACCAGCCGCT 60.512 61.111 0.00 0.00 0.00 5.52
21 22 1.215655 GACGCAATACCAGCCGCTAG 61.216 60.000 0.00 0.00 0.00 3.42
22 23 1.067416 CGCAATACCAGCCGCTAGA 59.933 57.895 0.00 0.00 0.00 2.43
36 37 1.979469 CGCTAGAAGTCGTCACACTTG 59.021 52.381 0.00 0.00 36.71 3.16
40 41 3.032017 AGAAGTCGTCACACTTGATGG 57.968 47.619 0.00 0.00 39.03 3.51
51 52 2.558359 ACACTTGATGGTTAGCAAAGGC 59.442 45.455 1.75 0.00 41.61 4.35
52 53 2.557924 CACTTGATGGTTAGCAAAGGCA 59.442 45.455 1.75 0.00 44.61 4.75
57 58 2.356665 TGGTTAGCAAAGGCAAGACA 57.643 45.000 0.00 0.00 44.61 3.41
60 61 2.604614 GGTTAGCAAAGGCAAGACAACG 60.605 50.000 0.00 0.00 44.61 4.10
109 110 1.376424 CCAGCAAGCGAGGATGTGT 60.376 57.895 1.09 0.00 0.00 3.72
112 113 1.446099 GCAAGCGAGGATGTGTCGA 60.446 57.895 0.00 0.00 39.92 4.20
119 120 0.179161 GAGGATGTGTCGACAGTCCG 60.179 60.000 29.82 0.00 36.05 4.79
125 126 0.522180 GTGTCGACAGTCCGATGAGT 59.478 55.000 20.73 0.00 40.91 3.41
126 127 0.521735 TGTCGACAGTCCGATGAGTG 59.478 55.000 15.76 0.00 45.71 3.51
128 129 1.199327 GTCGACAGTCCGATGAGTGAA 59.801 52.381 11.55 0.00 43.43 3.18
141 142 0.179150 GAGTGAAGAGATGCGAGCGT 60.179 55.000 0.00 0.00 0.00 5.07
146 147 0.100325 AAGAGATGCGAGCGTGAGAG 59.900 55.000 0.00 0.00 0.00 3.20
164 165 1.067582 GGAGGAAGACATACCGCGG 59.932 63.158 26.86 26.86 0.00 6.46
170 171 3.537874 GACATACCGCGGGGAGCT 61.538 66.667 31.76 10.73 45.59 4.09
191 192 4.385405 GAGGCTGCGTGGAGTGCT 62.385 66.667 0.00 0.00 0.00 4.40
192 193 3.890936 GAGGCTGCGTGGAGTGCTT 62.891 63.158 0.00 0.00 0.00 3.91
193 194 3.730761 GGCTGCGTGGAGTGCTTG 61.731 66.667 0.00 0.00 0.00 4.01
194 195 3.730761 GCTGCGTGGAGTGCTTGG 61.731 66.667 0.00 0.00 0.00 3.61
195 196 3.052082 CTGCGTGGAGTGCTTGGG 61.052 66.667 0.00 0.00 0.00 4.12
196 197 4.641645 TGCGTGGAGTGCTTGGGG 62.642 66.667 0.00 0.00 0.00 4.96
197 198 4.643387 GCGTGGAGTGCTTGGGGT 62.643 66.667 0.00 0.00 0.00 4.95
198 199 2.669569 CGTGGAGTGCTTGGGGTG 60.670 66.667 0.00 0.00 0.00 4.61
199 200 2.515901 GTGGAGTGCTTGGGGTGT 59.484 61.111 0.00 0.00 0.00 4.16
200 201 1.152756 GTGGAGTGCTTGGGGTGTT 60.153 57.895 0.00 0.00 0.00 3.32
201 202 0.755327 GTGGAGTGCTTGGGGTGTTT 60.755 55.000 0.00 0.00 0.00 2.83
202 203 0.754957 TGGAGTGCTTGGGGTGTTTG 60.755 55.000 0.00 0.00 0.00 2.93
203 204 1.363807 GAGTGCTTGGGGTGTTTGC 59.636 57.895 0.00 0.00 0.00 3.68
204 205 2.027460 GTGCTTGGGGTGTTTGCG 59.973 61.111 0.00 0.00 0.00 4.85
205 206 3.910490 TGCTTGGGGTGTTTGCGC 61.910 61.111 0.00 0.00 0.00 6.09
206 207 4.999939 GCTTGGGGTGTTTGCGCG 63.000 66.667 0.00 0.00 0.00 6.86
207 208 3.591835 CTTGGGGTGTTTGCGCGT 61.592 61.111 8.43 0.00 0.00 6.01
253 254 2.100631 CAAAGGCCTAGGTGCGTCG 61.101 63.158 5.16 0.00 0.00 5.12
254 255 2.280552 AAAGGCCTAGGTGCGTCGA 61.281 57.895 5.16 0.00 0.00 4.20
256 257 1.614241 AAGGCCTAGGTGCGTCGAAT 61.614 55.000 5.16 0.00 0.00 3.34
257 258 1.591863 GGCCTAGGTGCGTCGAATC 60.592 63.158 11.31 0.00 0.00 2.52
259 260 1.299165 CCTAGGTGCGTCGAATCCG 60.299 63.158 0.00 0.00 37.07 4.18
260 261 1.299165 CTAGGTGCGTCGAATCCGG 60.299 63.158 0.00 0.00 36.24 5.14
261 262 1.721664 CTAGGTGCGTCGAATCCGGA 61.722 60.000 6.61 6.61 36.24 5.14
262 263 1.721664 TAGGTGCGTCGAATCCGGAG 61.722 60.000 11.34 0.00 36.24 4.63
265 266 2.337246 TGCGTCGAATCCGGAGACA 61.337 57.895 19.08 3.97 34.80 3.41
268 269 1.132199 CGTCGAATCCGGAGACAACG 61.132 60.000 19.08 17.02 34.80 4.10
306 307 0.674581 TCGACTTCGACTAGGGCGAA 60.675 55.000 17.81 17.81 44.22 4.70
314 316 1.336332 CGACTAGGGCGAAGATGATGG 60.336 57.143 1.50 0.00 0.00 3.51
316 318 0.321122 CTAGGGCGAAGATGATGGGC 60.321 60.000 0.00 0.00 0.00 5.36
318 320 2.974698 GGCGAAGATGATGGGCGG 60.975 66.667 0.00 0.00 0.00 6.13
328 330 1.326951 TGATGGGCGGATCGAAGTGA 61.327 55.000 0.00 0.00 0.00 3.41
345 358 2.203998 AGGCAGGTGCTACAGGGT 60.204 61.111 1.26 0.00 41.70 4.34
352 365 3.702048 TGCTACAGGGTGTCCGCC 61.702 66.667 0.00 0.00 38.33 6.13
370 383 2.831597 CGTGGTCCGGTTTAACTCC 58.168 57.895 0.00 0.00 0.00 3.85
371 384 0.319405 CGTGGTCCGGTTTAACTCCT 59.681 55.000 0.00 0.00 0.00 3.69
372 385 1.670967 CGTGGTCCGGTTTAACTCCTC 60.671 57.143 0.00 0.00 0.00 3.71
374 387 1.621814 TGGTCCGGTTTAACTCCTCAG 59.378 52.381 0.00 0.00 0.00 3.35
376 389 2.301009 GGTCCGGTTTAACTCCTCAGAA 59.699 50.000 0.00 0.00 0.00 3.02
377 390 3.324117 GTCCGGTTTAACTCCTCAGAAC 58.676 50.000 0.00 0.00 0.00 3.01
378 391 2.967201 TCCGGTTTAACTCCTCAGAACA 59.033 45.455 0.00 0.00 0.00 3.18
411 424 6.653790 AGTAGTTAAAGCCTTTTAGGGGAT 57.346 37.500 0.00 0.00 35.37 3.85
412 425 6.660800 AGTAGTTAAAGCCTTTTAGGGGATC 58.339 40.000 0.00 0.00 35.37 3.36
414 427 2.437085 AAAGCCTTTTAGGGGATCGG 57.563 50.000 0.00 0.00 35.37 4.18
420 433 2.037381 CCTTTTAGGGGATCGGCTAGAC 59.963 54.545 0.00 0.00 0.00 2.59
492 505 3.867600 GCAATCCGGCATACATCTCATCT 60.868 47.826 0.00 0.00 0.00 2.90
546 559 8.570488 TCGTTTTCCCTAAATTTCTCCTAAAAC 58.430 33.333 0.00 6.40 33.28 2.43
550 563 7.337826 TCCCTAAATTTCTCCTAAAACCAGA 57.662 36.000 0.00 0.00 0.00 3.86
561 574 9.862149 TTCTCCTAAAACCAGATTTCTAAAACT 57.138 29.630 0.00 0.00 0.00 2.66
593 608 5.940192 TCACTTGAACATTGGTGATACAC 57.060 39.130 0.00 0.00 34.38 2.90
652 667 5.508320 GCTGATCCTTGTCTAGGTTAGCTAC 60.508 48.000 13.99 0.00 45.03 3.58
657 672 6.120905 TCCTTGTCTAGGTTAGCTACTACAG 58.879 44.000 0.00 0.00 45.03 2.74
660 675 6.058553 TGTCTAGGTTAGCTACTACAGACA 57.941 41.667 17.29 17.29 36.92 3.41
860 888 2.574955 GCACTGAGACAGACCGGGT 61.575 63.158 6.32 0.00 35.18 5.28
1012 1040 1.103398 TGAGCTCATCGCCTCATCGA 61.103 55.000 13.74 0.00 43.09 3.59
1042 1070 1.340088 TGCGTAGTGGTTACTTCCCA 58.660 50.000 0.00 0.00 38.36 4.37
1057 1085 2.971901 TCCCATCGAGCTACCATAGA 57.028 50.000 0.00 0.00 0.00 1.98
1085 1113 5.248640 AGAGAGTGAGTGAGAGAAGAAGAG 58.751 45.833 0.00 0.00 0.00 2.85
1091 1119 3.947834 GAGTGAGAGAAGAAGAGGAGGAG 59.052 52.174 0.00 0.00 0.00 3.69
1092 1120 3.023832 GTGAGAGAAGAAGAGGAGGAGG 58.976 54.545 0.00 0.00 0.00 4.30
1093 1121 2.922955 TGAGAGAAGAAGAGGAGGAGGA 59.077 50.000 0.00 0.00 0.00 3.71
1094 1122 3.335183 TGAGAGAAGAAGAGGAGGAGGAA 59.665 47.826 0.00 0.00 0.00 3.36
1095 1123 3.954258 GAGAGAAGAAGAGGAGGAGGAAG 59.046 52.174 0.00 0.00 0.00 3.46
1096 1124 3.596046 AGAGAAGAAGAGGAGGAGGAAGA 59.404 47.826 0.00 0.00 0.00 2.87
1101 1129 2.246091 AGAGGAGGAGGAAGACTTGG 57.754 55.000 0.00 0.00 0.00 3.61
1104 1132 2.907042 GAGGAGGAGGAAGACTTGGAAA 59.093 50.000 0.00 0.00 0.00 3.13
1105 1133 2.640332 AGGAGGAGGAAGACTTGGAAAC 59.360 50.000 0.00 0.00 0.00 2.78
1107 1135 2.299297 GAGGAGGAAGACTTGGAAACGA 59.701 50.000 0.00 0.00 0.00 3.85
1149 1180 0.402419 AGAGGATCATGGGCATGGGA 60.402 55.000 0.00 0.00 39.24 4.37
1272 1303 1.664965 GAGCCACTTCGTGCTCGTT 60.665 57.895 8.17 0.00 38.33 3.85
1365 1404 1.455217 ATCGACCCACCTCCCGTAG 60.455 63.158 0.00 0.00 0.00 3.51
1387 1510 1.420891 TGCAGTGCATATCATGGCCTA 59.579 47.619 15.37 0.00 31.71 3.93
1393 1524 3.503748 GTGCATATCATGGCCTAGTTTCC 59.496 47.826 3.32 0.00 0.00 3.13
1394 1525 3.084786 GCATATCATGGCCTAGTTTCCC 58.915 50.000 3.32 0.00 0.00 3.97
1395 1526 3.690460 CATATCATGGCCTAGTTTCCCC 58.310 50.000 3.32 0.00 0.00 4.81
1396 1527 0.474184 ATCATGGCCTAGTTTCCCCG 59.526 55.000 3.32 0.00 0.00 5.73
1397 1528 0.912487 TCATGGCCTAGTTTCCCCGT 60.912 55.000 3.32 0.00 0.00 5.28
1407 1538 1.606025 TTTCCCCGTGCATGCATGT 60.606 52.632 32.28 0.00 0.00 3.21
1408 1539 1.875420 TTTCCCCGTGCATGCATGTG 61.875 55.000 32.28 24.17 0.00 3.21
1409 1540 2.751036 CCCCGTGCATGCATGTGA 60.751 61.111 32.28 12.10 0.00 3.58
1410 1541 2.341875 CCCCGTGCATGCATGTGAA 61.342 57.895 32.28 11.22 0.00 3.18
1411 1542 1.585517 CCCGTGCATGCATGTGAAA 59.414 52.632 32.28 8.76 0.00 2.69
1412 1543 0.173935 CCCGTGCATGCATGTGAAAT 59.826 50.000 32.28 0.00 0.00 2.17
1413 1544 1.404748 CCCGTGCATGCATGTGAAATA 59.595 47.619 32.28 1.68 0.00 1.40
1414 1545 2.453080 CCGTGCATGCATGTGAAATAC 58.547 47.619 32.28 13.13 0.00 1.89
1415 1546 2.097954 CCGTGCATGCATGTGAAATACT 59.902 45.455 32.28 0.00 0.00 2.12
1416 1547 3.427909 CCGTGCATGCATGTGAAATACTT 60.428 43.478 32.28 0.00 0.00 2.24
1417 1548 3.787634 CGTGCATGCATGTGAAATACTTC 59.212 43.478 28.25 8.67 0.00 3.01
1418 1549 4.437794 CGTGCATGCATGTGAAATACTTCT 60.438 41.667 28.25 0.00 32.33 2.85
1419 1550 5.404946 GTGCATGCATGTGAAATACTTCTT 58.595 37.500 25.64 0.00 32.33 2.52
1420 1551 5.514204 GTGCATGCATGTGAAATACTTCTTC 59.486 40.000 25.64 6.41 32.33 2.87
1422 1553 4.944962 TGCATGTGAAATACTTCTTCGG 57.055 40.909 0.00 0.00 32.33 4.30
1423 1554 4.323417 TGCATGTGAAATACTTCTTCGGT 58.677 39.130 0.00 0.00 32.33 4.69
1424 1555 4.759693 TGCATGTGAAATACTTCTTCGGTT 59.240 37.500 0.00 0.00 32.33 4.44
1425 1556 5.106712 TGCATGTGAAATACTTCTTCGGTTC 60.107 40.000 0.00 0.00 32.33 3.62
1426 1557 5.673818 GCATGTGAAATACTTCTTCGGTTCC 60.674 44.000 0.00 0.00 32.33 3.62
1429 1560 6.761312 TGTGAAATACTTCTTCGGTTCCTAA 58.239 36.000 0.00 0.00 32.33 2.69
1430 1561 7.218614 TGTGAAATACTTCTTCGGTTCCTAAA 58.781 34.615 0.00 0.00 32.33 1.85
1436 1567 9.765795 AATACTTCTTCGGTTCCTAAATATGAG 57.234 33.333 0.00 0.00 0.00 2.90
1437 1568 7.419711 ACTTCTTCGGTTCCTAAATATGAGA 57.580 36.000 0.00 0.00 0.00 3.27
1438 1569 7.266400 ACTTCTTCGGTTCCTAAATATGAGAC 58.734 38.462 0.00 0.00 0.00 3.36
1439 1570 6.158023 TCTTCGGTTCCTAAATATGAGACC 57.842 41.667 0.00 0.00 0.00 3.85
1440 1571 5.897824 TCTTCGGTTCCTAAATATGAGACCT 59.102 40.000 0.00 0.00 0.00 3.85
1441 1572 6.383147 TCTTCGGTTCCTAAATATGAGACCTT 59.617 38.462 0.00 0.00 0.00 3.50
1442 1573 5.914033 TCGGTTCCTAAATATGAGACCTTG 58.086 41.667 0.00 0.00 0.00 3.61
1443 1574 5.424252 TCGGTTCCTAAATATGAGACCTTGT 59.576 40.000 0.00 0.00 0.00 3.16
1444 1575 6.608405 TCGGTTCCTAAATATGAGACCTTGTA 59.392 38.462 0.00 0.00 0.00 2.41
1445 1576 7.124599 TCGGTTCCTAAATATGAGACCTTGTAA 59.875 37.037 0.00 0.00 0.00 2.41
1446 1577 7.767198 CGGTTCCTAAATATGAGACCTTGTAAA 59.233 37.037 0.00 0.00 0.00 2.01
1447 1578 9.110502 GGTTCCTAAATATGAGACCTTGTAAAG 57.889 37.037 0.00 0.00 45.69 1.85
1507 1638 9.772973 ACATACTTTAAAGTGTACATTCACTCA 57.227 29.630 27.40 6.15 46.25 3.41
1513 1644 8.795786 TTAAAGTGTACATTCACTCATTTTGC 57.204 30.769 0.00 0.00 46.25 3.68
1514 1645 6.639632 AAGTGTACATTCACTCATTTTGCT 57.360 33.333 0.00 0.00 46.25 3.91
1515 1646 6.639632 AGTGTACATTCACTCATTTTGCTT 57.360 33.333 0.00 0.00 44.07 3.91
1516 1647 6.672147 AGTGTACATTCACTCATTTTGCTTC 58.328 36.000 0.00 0.00 44.07 3.86
1517 1648 5.565259 GTGTACATTCACTCATTTTGCTTCG 59.435 40.000 0.00 0.00 35.68 3.79
1518 1649 4.836125 ACATTCACTCATTTTGCTTCGT 57.164 36.364 0.00 0.00 0.00 3.85
1519 1650 5.940192 ACATTCACTCATTTTGCTTCGTA 57.060 34.783 0.00 0.00 0.00 3.43
1520 1651 6.500684 ACATTCACTCATTTTGCTTCGTAT 57.499 33.333 0.00 0.00 0.00 3.06
1521 1652 7.609760 ACATTCACTCATTTTGCTTCGTATA 57.390 32.000 0.00 0.00 0.00 1.47
1522 1653 8.213518 ACATTCACTCATTTTGCTTCGTATAT 57.786 30.769 0.00 0.00 0.00 0.86
1523 1654 9.325198 ACATTCACTCATTTTGCTTCGTATATA 57.675 29.630 0.00 0.00 0.00 0.86
1524 1655 9.803130 CATTCACTCATTTTGCTTCGTATATAG 57.197 33.333 0.00 0.00 0.00 1.31
1525 1656 8.942338 TTCACTCATTTTGCTTCGTATATAGT 57.058 30.769 0.00 0.00 0.00 2.12
1526 1657 8.942338 TCACTCATTTTGCTTCGTATATAGTT 57.058 30.769 0.00 0.00 0.00 2.24
1527 1658 9.378551 TCACTCATTTTGCTTCGTATATAGTTT 57.621 29.630 0.00 0.00 0.00 2.66
1595 1726 4.330250 AGTATAGGATTGATGTGCATGCC 58.670 43.478 16.68 7.25 0.00 4.40
1597 1728 1.108776 AGGATTGATGTGCATGCCAC 58.891 50.000 16.68 13.73 44.90 5.01
1598 1729 1.108776 GGATTGATGTGCATGCCACT 58.891 50.000 16.68 0.00 44.92 4.00
1599 1730 1.202371 GGATTGATGTGCATGCCACTG 60.202 52.381 16.68 0.00 44.92 3.66
1600 1731 0.174845 ATTGATGTGCATGCCACTGC 59.825 50.000 16.68 9.82 44.92 4.40
1601 1732 1.879737 TTGATGTGCATGCCACTGCC 61.880 55.000 16.68 7.47 44.92 4.85
1602 1733 3.072468 ATGTGCATGCCACTGCCC 61.072 61.111 16.68 0.00 44.92 5.36
1607 1738 3.682885 CATGCCACTGCCCGCAAA 61.683 61.111 0.00 0.00 38.75 3.68
1608 1739 2.916703 ATGCCACTGCCCGCAAAA 60.917 55.556 0.00 0.00 38.75 2.44
1609 1740 2.506061 ATGCCACTGCCCGCAAAAA 61.506 52.632 0.00 0.00 38.75 1.94
1657 1788 3.784412 AACCGCGCGTACATGCAC 61.784 61.111 29.95 0.00 34.15 4.57
1660 1791 4.537533 CGCGCGTACATGCACGTC 62.538 66.667 24.19 10.78 43.79 4.34
1675 1810 1.520590 CACGTCCGTTGCCAATTTTTG 59.479 47.619 0.00 0.00 0.00 2.44
1689 1824 5.238214 GCCAATTTTTGCTTGGACAAACATA 59.762 36.000 5.88 0.00 44.95 2.29
1691 1826 6.482973 CCAATTTTTGCTTGGACAAACATACT 59.517 34.615 0.00 0.00 44.95 2.12
1701 1836 9.929180 GCTTGGACAAACATACTATAGATATGA 57.071 33.333 20.13 3.35 34.65 2.15
1713 1848 7.831691 ACTATAGATATGAACTGTCAGTGCT 57.168 36.000 12.38 0.00 37.14 4.40
1726 1947 1.068588 TCAGTGCTAGTCACCACACAC 59.931 52.381 11.98 0.35 46.81 3.82
1727 1948 0.032130 AGTGCTAGTCACCACACACG 59.968 55.000 11.98 0.00 46.81 4.49
1728 1949 1.300620 TGCTAGTCACCACACACGC 60.301 57.895 0.00 0.00 0.00 5.34
1729 1950 1.300620 GCTAGTCACCACACACGCA 60.301 57.895 0.00 0.00 0.00 5.24
1733 1954 1.227263 GTCACCACACACGCAGAGT 60.227 57.895 0.00 0.00 0.00 3.24
1734 1955 0.031585 GTCACCACACACGCAGAGTA 59.968 55.000 0.00 0.00 0.00 2.59
1735 1956 0.031585 TCACCACACACGCAGAGTAC 59.968 55.000 0.00 0.00 0.00 2.73
1736 1957 0.944311 CACCACACACGCAGAGTACC 60.944 60.000 0.00 0.00 0.00 3.34
1739 1960 1.577468 CACACACGCAGAGTACCAAA 58.423 50.000 0.00 0.00 0.00 3.28
1740 1961 1.260561 CACACACGCAGAGTACCAAAC 59.739 52.381 0.00 0.00 0.00 2.93
1742 1963 0.466543 ACACGCAGAGTACCAAACCA 59.533 50.000 0.00 0.00 0.00 3.67
1743 1964 1.071699 ACACGCAGAGTACCAAACCAT 59.928 47.619 0.00 0.00 0.00 3.55
1744 1965 1.732259 CACGCAGAGTACCAAACCATC 59.268 52.381 0.00 0.00 0.00 3.51
1746 1967 1.732259 CGCAGAGTACCAAACCATCAC 59.268 52.381 0.00 0.00 0.00 3.06
1748 1969 2.744202 GCAGAGTACCAAACCATCACAG 59.256 50.000 0.00 0.00 0.00 3.66
1749 1970 3.338249 CAGAGTACCAAACCATCACAGG 58.662 50.000 0.00 0.00 0.00 4.00
1751 1972 3.261897 AGAGTACCAAACCATCACAGGAG 59.738 47.826 0.00 0.00 0.00 3.69
1752 1973 2.305927 AGTACCAAACCATCACAGGAGG 59.694 50.000 0.00 0.00 0.00 4.30
1780 2169 3.489568 CCAACATGCATGCACGTTCATAT 60.490 43.478 27.74 5.64 29.45 1.78
1781 2170 4.261114 CCAACATGCATGCACGTTCATATA 60.261 41.667 27.74 0.00 29.45 0.86
1782 2171 4.472691 ACATGCATGCACGTTCATATAC 57.527 40.909 25.37 0.00 0.00 1.47
1783 2172 4.129380 ACATGCATGCACGTTCATATACT 58.871 39.130 25.37 0.00 0.00 2.12
1784 2173 5.296748 ACATGCATGCACGTTCATATACTA 58.703 37.500 25.37 0.00 0.00 1.82
1786 2175 4.944048 TGCATGCACGTTCATATACTACT 58.056 39.130 18.46 0.00 0.00 2.57
1787 2176 4.982295 TGCATGCACGTTCATATACTACTC 59.018 41.667 18.46 0.00 0.00 2.59
1788 2177 5.221244 TGCATGCACGTTCATATACTACTCT 60.221 40.000 18.46 0.00 0.00 3.24
1789 2178 5.692204 GCATGCACGTTCATATACTACTCTT 59.308 40.000 14.21 0.00 0.00 2.85
1791 2180 7.381408 GCATGCACGTTCATATACTACTCTTTA 59.619 37.037 14.21 0.00 0.00 1.85
1792 2181 8.691727 CATGCACGTTCATATACTACTCTTTAC 58.308 37.037 0.00 0.00 0.00 2.01
1793 2182 7.764331 TGCACGTTCATATACTACTCTTTACA 58.236 34.615 0.00 0.00 0.00 2.41
1794 2183 7.699391 TGCACGTTCATATACTACTCTTTACAC 59.301 37.037 0.00 0.00 0.00 2.90
1795 2184 7.914346 GCACGTTCATATACTACTCTTTACACT 59.086 37.037 0.00 0.00 0.00 3.55
1840 2229 9.751542 CATCTTACTACATTAGTTTACAGAGGG 57.248 37.037 0.00 0.00 40.14 4.30
1841 2230 9.710818 ATCTTACTACATTAGTTTACAGAGGGA 57.289 33.333 0.00 0.00 40.14 4.20
1854 2243 6.999705 TTACAGAGGGAGTAGTTTTTACCA 57.000 37.500 0.00 0.00 0.00 3.25
1859 2248 5.131475 AGAGGGAGTAGTTTTTACCACACAA 59.869 40.000 0.00 0.00 0.00 3.33
1871 2260 1.308047 CCACACAACTGCAGCACTTA 58.692 50.000 15.27 0.00 0.00 2.24
1873 2262 1.002468 CACACAACTGCAGCACTTACC 60.002 52.381 15.27 0.00 0.00 2.85
1876 2265 1.317613 CAACTGCAGCACTTACCCAA 58.682 50.000 15.27 0.00 0.00 4.12
1877 2266 1.888512 CAACTGCAGCACTTACCCAAT 59.111 47.619 15.27 0.00 0.00 3.16
1887 2276 5.824624 CAGCACTTACCCAATAATGATGACT 59.175 40.000 0.00 0.00 0.00 3.41
1888 2277 6.992123 CAGCACTTACCCAATAATGATGACTA 59.008 38.462 0.00 0.00 0.00 2.59
1889 2278 6.992715 AGCACTTACCCAATAATGATGACTAC 59.007 38.462 0.00 0.00 0.00 2.73
1890 2279 6.992715 GCACTTACCCAATAATGATGACTACT 59.007 38.462 0.00 0.00 0.00 2.57
1891 2280 7.041780 GCACTTACCCAATAATGATGACTACTG 60.042 40.741 0.00 0.00 0.00 2.74
1892 2281 7.442364 CACTTACCCAATAATGATGACTACTGG 59.558 40.741 0.00 0.00 0.00 4.00
1893 2282 7.347222 ACTTACCCAATAATGATGACTACTGGA 59.653 37.037 0.00 0.00 0.00 3.86
1894 2283 6.575244 ACCCAATAATGATGACTACTGGAA 57.425 37.500 0.00 0.00 0.00 3.53
1895 2284 6.595682 ACCCAATAATGATGACTACTGGAAG 58.404 40.000 0.00 0.00 42.29 3.46
1916 2305 2.529151 CCCGAAATGGCTCGATTTTTG 58.471 47.619 0.00 0.00 41.44 2.44
1928 2322 5.205565 GCTCGATTTTTGAGTTCTCGTTTT 58.794 37.500 0.00 0.00 35.85 2.43
1929 2323 5.337251 GCTCGATTTTTGAGTTCTCGTTTTC 59.663 40.000 0.00 0.00 35.85 2.29
1930 2324 6.598753 TCGATTTTTGAGTTCTCGTTTTCT 57.401 33.333 0.00 0.00 0.00 2.52
1931 2325 7.011828 TCGATTTTTGAGTTCTCGTTTTCTT 57.988 32.000 0.00 0.00 0.00 2.52
1932 2326 7.469260 TCGATTTTTGAGTTCTCGTTTTCTTT 58.531 30.769 0.00 0.00 0.00 2.52
1933 2327 7.966204 TCGATTTTTGAGTTCTCGTTTTCTTTT 59.034 29.630 0.00 0.00 0.00 2.27
1934 2328 8.583765 CGATTTTTGAGTTCTCGTTTTCTTTTT 58.416 29.630 0.00 0.00 0.00 1.94
1935 2329 9.675553 GATTTTTGAGTTCTCGTTTTCTTTTTG 57.324 29.630 0.00 0.00 0.00 2.44
1936 2330 6.626199 TTTGAGTTCTCGTTTTCTTTTTGC 57.374 33.333 0.00 0.00 0.00 3.68
1937 2331 4.339429 TGAGTTCTCGTTTTCTTTTTGCG 58.661 39.130 0.00 0.00 0.00 4.85
1938 2332 3.691498 AGTTCTCGTTTTCTTTTTGCGG 58.309 40.909 0.00 0.00 0.00 5.69
1939 2333 2.766970 TCTCGTTTTCTTTTTGCGGG 57.233 45.000 0.00 0.00 0.00 6.13
1940 2334 1.335496 TCTCGTTTTCTTTTTGCGGGG 59.665 47.619 0.00 0.00 0.00 5.73
1941 2335 1.066454 CTCGTTTTCTTTTTGCGGGGT 59.934 47.619 0.00 0.00 0.00 4.95
1942 2336 1.202313 TCGTTTTCTTTTTGCGGGGTG 60.202 47.619 0.00 0.00 0.00 4.61
1943 2337 1.470112 CGTTTTCTTTTTGCGGGGTGT 60.470 47.619 0.00 0.00 0.00 4.16
1944 2338 2.623535 GTTTTCTTTTTGCGGGGTGTT 58.376 42.857 0.00 0.00 0.00 3.32
1945 2339 2.588027 TTTCTTTTTGCGGGGTGTTC 57.412 45.000 0.00 0.00 0.00 3.18
1946 2340 0.747852 TTCTTTTTGCGGGGTGTTCC 59.252 50.000 0.00 0.00 0.00 3.62
1947 2341 0.395862 TCTTTTTGCGGGGTGTTCCA 60.396 50.000 0.00 0.00 37.22 3.53
1948 2342 0.031994 CTTTTTGCGGGGTGTTCCAG 59.968 55.000 0.00 0.00 37.22 3.86
1953 2347 2.266055 CGGGGTGTTCCAGCTCTC 59.734 66.667 0.00 0.00 37.22 3.20
1955 2349 1.903877 CGGGGTGTTCCAGCTCTCAT 61.904 60.000 0.00 0.00 37.22 2.90
1968 2362 4.328440 CCAGCTCTCATTTAGTTCGACAAG 59.672 45.833 0.00 0.00 0.00 3.16
1972 2366 6.312426 AGCTCTCATTTAGTTCGACAAGATTG 59.688 38.462 0.00 0.00 0.00 2.67
1997 2391 3.200825 AGGGAGGGACAATGTACATGAAG 59.799 47.826 9.63 5.44 0.00 3.02
1998 2392 3.545703 GGAGGGACAATGTACATGAAGG 58.454 50.000 9.63 2.51 0.00 3.46
1999 2393 3.545703 GAGGGACAATGTACATGAAGGG 58.454 50.000 9.63 0.01 0.00 3.95
2000 2394 2.242196 AGGGACAATGTACATGAAGGGG 59.758 50.000 9.63 0.00 0.00 4.79
2005 2399 5.422012 GGACAATGTACATGAAGGGGAAAAT 59.578 40.000 9.63 0.00 0.00 1.82
2012 2421 9.881773 ATGTACATGAAGGGGAAAATGTATATT 57.118 29.630 7.78 0.00 35.22 1.28
2015 2424 6.554605 ACATGAAGGGGAAAATGTATATTGGG 59.445 38.462 0.00 0.00 31.63 4.12
2022 2431 9.379770 AGGGGAAAATGTATATTGGGAAATTAG 57.620 33.333 0.00 0.00 0.00 1.73
2034 2443 2.014128 GGAAATTAGCAACGCCAGCTA 58.986 47.619 0.53 0.53 43.25 3.32
2040 2469 2.046892 CAACGCCAGCTAGCCACT 60.047 61.111 12.13 0.00 0.00 4.00
2047 2476 1.153745 CAGCTAGCCACTCCACGAC 60.154 63.158 12.13 0.00 0.00 4.34
2087 2516 4.833126 ACAATTTGTTCAGTTCGTTCTCG 58.167 39.130 0.00 0.00 38.55 4.04
2096 2525 3.000476 TCAGTTCGTTCTCGTTTTTGTCG 60.000 43.478 0.00 0.00 38.33 4.35
2104 2533 5.202640 GTTCTCGTTTTTGTCGCATTTAGT 58.797 37.500 0.00 0.00 0.00 2.24
2106 2535 5.812652 TCTCGTTTTTGTCGCATTTAGTTT 58.187 33.333 0.00 0.00 0.00 2.66
2107 2536 6.259638 TCTCGTTTTTGTCGCATTTAGTTTT 58.740 32.000 0.00 0.00 0.00 2.43
2130 3345 6.691754 TTTTGTGTGTCTCATTTAGAAGCA 57.308 33.333 0.00 0.00 35.47 3.91
2131 3346 6.882610 TTTGTGTGTCTCATTTAGAAGCAT 57.117 33.333 0.00 0.00 35.47 3.79
2134 3349 6.175471 TGTGTGTCTCATTTAGAAGCATCAT 58.825 36.000 0.00 0.00 35.47 2.45
2135 3350 6.656270 TGTGTGTCTCATTTAGAAGCATCATT 59.344 34.615 0.00 0.00 35.47 2.57
2136 3351 7.148356 TGTGTGTCTCATTTAGAAGCATCATTC 60.148 37.037 0.00 0.00 35.47 2.67
2137 3352 6.317140 TGTGTCTCATTTAGAAGCATCATTCC 59.683 38.462 0.00 0.00 35.47 3.01
2138 3353 6.541641 GTGTCTCATTTAGAAGCATCATTCCT 59.458 38.462 0.00 0.00 35.47 3.36
2139 3354 7.066766 GTGTCTCATTTAGAAGCATCATTCCTT 59.933 37.037 0.00 0.00 35.47 3.36
2140 3355 7.613022 TGTCTCATTTAGAAGCATCATTCCTTT 59.387 33.333 0.00 0.00 35.47 3.11
2141 3356 8.465201 GTCTCATTTAGAAGCATCATTCCTTTT 58.535 33.333 0.00 0.00 35.47 2.27
2142 3357 9.685276 TCTCATTTAGAAGCATCATTCCTTTTA 57.315 29.630 0.00 0.00 0.00 1.52
2150 3365 7.836183 AGAAGCATCATTCCTTTTATAACCTGT 59.164 33.333 0.00 0.00 0.00 4.00
2186 3401 1.063764 GATCGACCAGTACTCGTGGAC 59.936 57.143 7.45 0.34 38.57 4.02
2189 3404 0.109226 GACCAGTACTCGTGGACTGC 60.109 60.000 21.84 7.84 41.48 4.40
2193 3408 1.443872 GTACTCGTGGACTGCACCG 60.444 63.158 0.00 0.00 0.00 4.94
2202 3434 3.462199 GACTGCACCGGGGCCTATC 62.462 68.421 29.43 17.44 0.00 2.08
2229 3461 6.007076 TGATACCTTATTCTGTTTTGCACCA 58.993 36.000 0.00 0.00 0.00 4.17
2251 3494 6.536224 ACCAGCAAATTAAGCAGAATAATTGC 59.464 34.615 10.02 10.02 41.83 3.56
2263 3506 4.262045 CAGAATAATTGCCACGCGTTAAAC 59.738 41.667 10.22 0.00 0.00 2.01
2270 3541 1.080298 CCACGCGTTAAACCAGCATA 58.920 50.000 10.22 0.00 0.00 3.14
2302 3579 5.648572 TCATCAAGCAGCATCGATCTATAG 58.351 41.667 0.00 0.00 0.00 1.31
2303 3580 3.842820 TCAAGCAGCATCGATCTATAGC 58.157 45.455 0.00 0.00 0.00 2.97
2304 3581 3.256631 TCAAGCAGCATCGATCTATAGCA 59.743 43.478 7.34 0.00 0.00 3.49
2306 3583 3.087781 AGCAGCATCGATCTATAGCAGA 58.912 45.455 7.34 0.00 37.79 4.26
2307 3584 3.129113 AGCAGCATCGATCTATAGCAGAG 59.871 47.826 7.34 0.00 36.48 3.35
2310 3587 3.119531 AGCATCGATCTATAGCAGAGTGC 60.120 47.826 7.34 3.36 45.46 4.40
2347 3629 7.925483 AGAGTGCATAAATTAGCAGAAGTAGAG 59.075 37.037 0.00 0.00 42.14 2.43
2360 3642 7.790027 AGCAGAAGTAGAGAATGACACATAAT 58.210 34.615 0.00 0.00 0.00 1.28
2372 3654 9.632638 AGAATGACACATAATAAAGCAGGTATT 57.367 29.630 0.00 0.00 0.00 1.89
2379 3661 7.220683 CACATAATAAAGCAGGTATTTGTGTGC 59.779 37.037 13.16 0.00 33.95 4.57
2405 3705 0.804544 TGCCGTATCTGTGCTTACGC 60.805 55.000 0.00 0.00 39.78 4.42
2436 3736 2.432628 CTTGGCGACGTCCCACTC 60.433 66.667 21.00 3.88 30.65 3.51
2444 3744 3.991051 CGTCCCACTCGGCTGTGT 61.991 66.667 0.00 0.00 36.30 3.72
2445 3745 2.357517 GTCCCACTCGGCTGTGTG 60.358 66.667 18.73 18.73 38.89 3.82
2446 3746 4.314440 TCCCACTCGGCTGTGTGC 62.314 66.667 19.97 0.00 38.07 4.57
2461 3761 3.267233 TGCCCTGCCCTGATTGGT 61.267 61.111 0.00 0.00 0.00 3.67
2473 3773 0.036732 TGATTGGTCACTGGTGGAGC 59.963 55.000 0.70 0.00 0.00 4.70
2474 3774 1.003355 ATTGGTCACTGGTGGAGCG 60.003 57.895 0.70 0.00 35.60 5.03
2475 3775 1.768684 ATTGGTCACTGGTGGAGCGT 61.769 55.000 0.70 0.00 35.60 5.07
2476 3776 2.357517 GGTCACTGGTGGAGCGTG 60.358 66.667 0.70 0.00 0.00 5.34
2477 3777 2.357517 GTCACTGGTGGAGCGTGG 60.358 66.667 0.70 0.00 0.00 4.94
2479 3779 2.047844 CACTGGTGGAGCGTGGAG 60.048 66.667 0.00 0.00 0.00 3.86
2480 3780 3.314331 ACTGGTGGAGCGTGGAGG 61.314 66.667 0.00 0.00 0.00 4.30
2481 3781 3.314331 CTGGTGGAGCGTGGAGGT 61.314 66.667 0.00 0.00 0.00 3.85
2482 3782 3.302347 CTGGTGGAGCGTGGAGGTC 62.302 68.421 0.00 0.00 46.08 3.85
2487 3787 3.208335 GAGCGTGGAGGTCCTACC 58.792 66.667 0.00 0.00 41.28 3.18
2488 3788 1.681327 GAGCGTGGAGGTCCTACCA 60.681 63.158 0.00 2.28 41.95 3.25
2489 3789 1.001760 AGCGTGGAGGTCCTACCAT 59.998 57.895 11.76 0.00 41.95 3.55
2490 3790 1.144057 GCGTGGAGGTCCTACCATG 59.856 63.158 18.40 18.40 41.95 3.66
2512 3821 0.611618 TGCATGGAACCCACATGTCC 60.612 55.000 0.00 0.00 45.68 4.02
2513 3822 0.323725 GCATGGAACCCACATGTCCT 60.324 55.000 0.00 0.00 45.68 3.85
2514 3823 1.466856 CATGGAACCCACATGTCCTG 58.533 55.000 0.00 0.00 40.54 3.86
2599 4622 9.534565 TCATGAAAGATCACTAGCTAATTGTAC 57.465 33.333 0.00 0.00 38.69 2.90
2609 4633 4.882671 AGCTAATTGTACATTTGCTCCG 57.117 40.909 12.20 0.00 35.78 4.63
2610 4634 3.065371 AGCTAATTGTACATTTGCTCCGC 59.935 43.478 12.20 7.47 35.78 5.54
2611 4635 2.542766 AATTGTACATTTGCTCCGCG 57.457 45.000 0.00 0.00 0.00 6.46
2612 4636 1.448985 ATTGTACATTTGCTCCGCGT 58.551 45.000 4.92 0.00 0.00 6.01
2613 4637 2.081725 TTGTACATTTGCTCCGCGTA 57.918 45.000 4.92 0.00 0.00 4.42
2614 4638 1.352114 TGTACATTTGCTCCGCGTAC 58.648 50.000 4.92 0.00 34.40 3.67
2615 4639 0.296642 GTACATTTGCTCCGCGTACG 59.703 55.000 11.84 11.84 39.67 3.67
2652 4711 3.760684 GACTGAGGCCAAAGATGACAATT 59.239 43.478 5.01 0.00 0.00 2.32
2702 4765 2.093306 TTCCTCGAGTACGTCCGTTA 57.907 50.000 12.31 0.00 40.69 3.18
2810 4908 2.749044 CGCAGGCCTGTGCTTGAT 60.749 61.111 32.12 0.00 46.84 2.57
3041 5139 1.384191 GCAGTTCCCCTGGACCAAT 59.616 57.895 0.00 0.00 41.81 3.16
3489 5599 7.123098 TCGGAAGGTACACTACATTTCTTCATA 59.877 37.037 0.00 0.00 32.21 2.15
3531 5643 9.976776 AGGATCGACAAAGATATATACTTCCTA 57.023 33.333 0.00 0.00 0.00 2.94
3536 5648 7.687347 CGACAAAGATATATACTTCCTACGTCG 59.313 40.741 0.00 0.00 34.00 5.12
3557 5686 3.617669 GCGATTTTTCGGTGACCATATG 58.382 45.455 1.11 0.00 0.00 1.78
3728 5862 3.139077 GTGAAACTAATAGCCCGGATGG 58.861 50.000 0.73 0.00 37.09 3.51
3854 6019 0.827507 GGGGCAAGAGCAAGGACAAA 60.828 55.000 0.00 0.00 44.61 2.83
3890 6055 1.674962 GACGACTTCATAGCCGGTAGT 59.325 52.381 1.90 0.00 30.87 2.73
3978 6152 2.515057 ACGGCAAGTTCAACGGCA 60.515 55.556 9.09 0.00 0.00 5.69
3983 6160 0.110192 GCAAGTTCAACGGCAGCTAC 60.110 55.000 2.73 0.00 0.00 3.58
4059 6242 0.587285 GGAGCATACGTCGATCGAGT 59.413 55.000 20.09 19.56 42.86 4.18
4166 6353 5.395435 CCTGTCATGTGAGAGAATGATCAGT 60.395 44.000 8.58 0.00 37.62 3.41
4234 6421 2.348362 TCGTGATCGCTTGCTTAATGTG 59.652 45.455 4.48 0.00 36.96 3.21
4263 6450 7.268586 TGAGAATGCCTAAAACTCATCTAGAC 58.731 38.462 0.00 0.00 33.57 2.59
4266 6453 8.103305 AGAATGCCTAAAACTCATCTAGACAAA 58.897 33.333 0.00 0.00 0.00 2.83
4317 6504 8.246180 ACATTGACCTCATCATTGTTGTTATTC 58.754 33.333 0.00 0.00 45.41 1.75
4319 6506 9.685276 ATTGACCTCATCATTGTTGTTATTCTA 57.315 29.630 0.00 0.00 37.11 2.10
4331 6518 8.902540 TTGTTGTTATTCTAGTTCAGTCACAT 57.097 30.769 0.00 0.00 0.00 3.21
4332 6519 8.310406 TGTTGTTATTCTAGTTCAGTCACATG 57.690 34.615 0.00 0.00 0.00 3.21
4333 6520 7.931407 TGTTGTTATTCTAGTTCAGTCACATGT 59.069 33.333 0.00 0.00 0.00 3.21
4334 6521 8.774586 GTTGTTATTCTAGTTCAGTCACATGTT 58.225 33.333 0.00 0.00 0.00 2.71
4335 6522 8.534333 TGTTATTCTAGTTCAGTCACATGTTC 57.466 34.615 0.00 0.00 0.00 3.18
4336 6523 8.367911 TGTTATTCTAGTTCAGTCACATGTTCT 58.632 33.333 0.00 0.00 0.00 3.01
4337 6524 9.209175 GTTATTCTAGTTCAGTCACATGTTCTT 57.791 33.333 0.00 0.00 0.00 2.52
4338 6525 9.778741 TTATTCTAGTTCAGTCACATGTTCTTT 57.221 29.630 0.00 0.00 0.00 2.52
4339 6526 8.682936 ATTCTAGTTCAGTCACATGTTCTTTT 57.317 30.769 0.00 0.00 0.00 2.27
4340 6527 8.506168 TTCTAGTTCAGTCACATGTTCTTTTT 57.494 30.769 0.00 0.00 0.00 1.94
4910 7111 3.991051 CATACCGGCGGCGATCCT 61.991 66.667 34.49 14.05 0.00 3.24
4911 7112 3.231736 ATACCGGCGGCGATCCTT 61.232 61.111 34.49 13.29 0.00 3.36
4995 7196 6.379133 ACATGCATACCTCTGAAAAATGTCAT 59.621 34.615 0.00 0.00 0.00 3.06
5039 7240 1.284408 GCGGGAGTGAGAGATAGCG 59.716 63.158 0.00 0.00 0.00 4.26
5040 7241 1.167155 GCGGGAGTGAGAGATAGCGA 61.167 60.000 0.00 0.00 0.00 4.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.261951 CGGCTGGTATTGCGTCGG 61.262 66.667 0.00 0.00 0.00 4.79
1 2 2.947118 TAGCGGCTGGTATTGCGTCG 62.947 60.000 13.86 0.00 0.00 5.12
4 5 0.529773 TTCTAGCGGCTGGTATTGCG 60.530 55.000 13.86 0.00 0.00 4.85
5 6 1.221414 CTTCTAGCGGCTGGTATTGC 58.779 55.000 13.86 0.00 0.00 3.56
6 7 2.474816 GACTTCTAGCGGCTGGTATTG 58.525 52.381 13.86 4.67 0.00 1.90
8 9 0.669077 CGACTTCTAGCGGCTGGTAT 59.331 55.000 13.86 0.00 0.00 2.73
9 10 0.679002 ACGACTTCTAGCGGCTGGTA 60.679 55.000 13.86 4.06 0.00 3.25
19 20 3.572682 ACCATCAAGTGTGACGACTTCTA 59.427 43.478 0.00 0.00 36.31 2.10
21 22 2.755650 ACCATCAAGTGTGACGACTTC 58.244 47.619 0.00 0.00 36.31 3.01
22 23 2.910688 ACCATCAAGTGTGACGACTT 57.089 45.000 0.00 0.00 36.31 3.01
36 37 2.819608 TGTCTTGCCTTTGCTAACCATC 59.180 45.455 0.00 0.00 38.71 3.51
40 41 2.289547 TCGTTGTCTTGCCTTTGCTAAC 59.710 45.455 0.00 0.00 38.71 2.34
57 58 1.241315 CCCTCGCCCAACAAATCGTT 61.241 55.000 0.00 0.00 38.83 3.85
60 61 2.885113 GCCCTCGCCCAACAAATC 59.115 61.111 0.00 0.00 0.00 2.17
78 79 1.804396 TTGCTGGTCGGCCATGTTTG 61.804 55.000 10.40 0.00 45.05 2.93
90 91 1.376424 CACATCCTCGCTTGCTGGT 60.376 57.895 0.00 0.00 0.00 4.00
94 95 1.446099 TCGACACATCCTCGCTTGC 60.446 57.895 0.00 0.00 0.00 4.01
95 96 0.388520 TGTCGACACATCCTCGCTTG 60.389 55.000 15.76 0.00 0.00 4.01
96 97 0.109086 CTGTCGACACATCCTCGCTT 60.109 55.000 15.76 0.00 0.00 4.68
97 98 1.244697 ACTGTCGACACATCCTCGCT 61.245 55.000 15.76 0.00 0.00 4.93
98 99 0.798771 GACTGTCGACACATCCTCGC 60.799 60.000 15.76 0.00 0.00 5.03
109 110 1.468914 CTTCACTCATCGGACTGTCGA 59.531 52.381 1.07 3.47 43.61 4.20
112 113 2.796557 TCTCTTCACTCATCGGACTGT 58.203 47.619 0.00 0.00 0.00 3.55
119 120 2.126467 GCTCGCATCTCTTCACTCATC 58.874 52.381 0.00 0.00 0.00 2.92
125 126 0.179153 CTCACGCTCGCATCTCTTCA 60.179 55.000 0.00 0.00 0.00 3.02
126 127 0.099613 TCTCACGCTCGCATCTCTTC 59.900 55.000 0.00 0.00 0.00 2.87
128 129 1.723608 CCTCTCACGCTCGCATCTCT 61.724 60.000 0.00 0.00 0.00 3.10
141 142 2.656002 CGGTATGTCTTCCTCCTCTCA 58.344 52.381 0.00 0.00 0.00 3.27
146 147 1.067582 CCGCGGTATGTCTTCCTCC 59.932 63.158 19.50 0.00 0.00 4.30
183 184 0.754957 CAAACACCCCAAGCACTCCA 60.755 55.000 0.00 0.00 0.00 3.86
186 187 2.489275 CGCAAACACCCCAAGCACT 61.489 57.895 0.00 0.00 0.00 4.40
187 188 2.027460 CGCAAACACCCCAAGCAC 59.973 61.111 0.00 0.00 0.00 4.40
188 189 3.910490 GCGCAAACACCCCAAGCA 61.910 61.111 0.30 0.00 0.00 3.91
189 190 4.999939 CGCGCAAACACCCCAAGC 63.000 66.667 8.75 0.00 0.00 4.01
190 191 2.621371 AAACGCGCAAACACCCCAAG 62.621 55.000 5.73 0.00 0.00 3.61
191 192 2.615262 GAAACGCGCAAACACCCCAA 62.615 55.000 5.73 0.00 0.00 4.12
192 193 3.127352 GAAACGCGCAAACACCCCA 62.127 57.895 5.73 0.00 0.00 4.96
193 194 2.354188 GAAACGCGCAAACACCCC 60.354 61.111 5.73 0.00 0.00 4.95
194 195 2.724358 CGAAACGCGCAAACACCC 60.724 61.111 5.73 0.00 0.00 4.61
195 196 2.724358 CCGAAACGCGCAAACACC 60.724 61.111 5.73 0.00 39.11 4.16
196 197 1.525804 GAACCGAAACGCGCAAACAC 61.526 55.000 5.73 0.00 39.11 3.32
197 198 1.297745 GAACCGAAACGCGCAAACA 60.298 52.632 5.73 0.00 39.11 2.83
198 199 0.990295 GAGAACCGAAACGCGCAAAC 60.990 55.000 5.73 0.00 39.11 2.93
199 200 1.277440 GAGAACCGAAACGCGCAAA 59.723 52.632 5.73 0.00 39.11 3.68
200 201 2.932905 GAGAACCGAAACGCGCAA 59.067 55.556 5.73 0.00 39.11 4.85
201 202 3.399770 CGAGAACCGAAACGCGCA 61.400 61.111 5.73 0.00 41.76 6.09
202 203 3.101428 TCGAGAACCGAAACGCGC 61.101 61.111 5.73 0.00 45.43 6.86
220 221 0.575390 CTTTGTGTCGTCGCGTTTCT 59.425 50.000 5.77 0.00 0.00 2.52
259 260 1.210155 GCATGTTGCCGTTGTCTCC 59.790 57.895 0.00 0.00 37.42 3.71
260 261 1.154413 CGCATGTTGCCGTTGTCTC 60.154 57.895 0.00 0.00 41.12 3.36
261 262 0.601576 TACGCATGTTGCCGTTGTCT 60.602 50.000 1.47 0.00 41.12 3.41
262 263 0.179225 CTACGCATGTTGCCGTTGTC 60.179 55.000 1.47 0.00 41.12 3.18
265 266 0.726827 CATCTACGCATGTTGCCGTT 59.273 50.000 1.47 0.00 41.12 4.44
268 269 0.734889 AAGCATCTACGCATGTTGCC 59.265 50.000 0.00 0.00 41.12 4.52
269 270 1.593070 CGAAGCATCTACGCATGTTGC 60.593 52.381 0.00 0.00 40.69 4.17
271 272 1.927174 GTCGAAGCATCTACGCATGTT 59.073 47.619 0.00 0.00 0.00 2.71
298 299 1.754745 GCCCATCATCTTCGCCCTA 59.245 57.895 0.00 0.00 0.00 3.53
300 301 2.974698 CGCCCATCATCTTCGCCC 60.975 66.667 0.00 0.00 0.00 6.13
306 307 0.319728 CTTCGATCCGCCCATCATCT 59.680 55.000 0.00 0.00 0.00 2.90
314 316 2.586357 GCCTCACTTCGATCCGCC 60.586 66.667 0.00 0.00 0.00 6.13
316 318 1.227089 CCTGCCTCACTTCGATCCG 60.227 63.158 0.00 0.00 0.00 4.18
318 320 1.086634 GCACCTGCCTCACTTCGATC 61.087 60.000 0.00 0.00 34.31 3.69
328 330 2.203998 ACCCTGTAGCACCTGCCT 60.204 61.111 0.00 0.00 43.38 4.75
352 365 0.319405 AGGAGTTAAACCGGACCACG 59.681 55.000 9.46 0.00 43.80 4.94
407 420 0.037790 GAGCATGTCTAGCCGATCCC 60.038 60.000 0.00 0.00 0.00 3.85
411 424 0.179100 GCAAGAGCATGTCTAGCCGA 60.179 55.000 0.00 0.00 41.58 5.54
412 425 1.156645 GGCAAGAGCATGTCTAGCCG 61.157 60.000 0.00 0.00 44.61 5.52
414 427 1.297664 CTGGCAAGAGCATGTCTAGC 58.702 55.000 0.00 0.00 44.61 3.42
420 433 4.883026 GCAACTGGCAAGAGCATG 57.117 55.556 0.00 0.00 44.61 4.06
510 523 8.625786 AATTTAGGGAAAACGAGCTTTAGTTA 57.374 30.769 0.00 0.00 0.00 2.24
515 528 6.294564 GGAGAAATTTAGGGAAAACGAGCTTT 60.295 38.462 0.00 0.00 0.00 3.51
518 531 4.700692 AGGAGAAATTTAGGGAAAACGAGC 59.299 41.667 0.00 0.00 0.00 5.03
560 573 9.912634 ACCAATGTTCAAGTGAATTAATGTTAG 57.087 29.630 0.00 0.00 36.33 2.34
561 574 9.689976 CACCAATGTTCAAGTGAATTAATGTTA 57.310 29.630 0.00 0.00 36.33 2.41
570 585 6.312399 GTGTATCACCAATGTTCAAGTGAA 57.688 37.500 0.00 0.00 42.14 3.18
593 608 8.594881 ATGAGTTAATCAGCTCGTAATTAAGG 57.405 34.615 0.00 0.00 42.53 2.69
652 667 0.443869 GCGTGCATGGTTGTCTGTAG 59.556 55.000 8.27 0.00 0.00 2.74
657 672 2.127270 CGTGCGTGCATGGTTGTC 60.127 61.111 8.27 0.00 0.00 3.18
839 867 0.036952 CCGGTCTGTCTCAGTGCAAT 60.037 55.000 0.00 0.00 32.61 3.56
841 869 2.574018 CCCGGTCTGTCTCAGTGCA 61.574 63.158 0.00 0.00 32.61 4.57
860 888 2.805546 GAGTCACGGATGCGCCTA 59.194 61.111 6.51 0.00 0.00 3.93
912 940 0.537371 CCAGGGTTCAGGTGTTGGAC 60.537 60.000 0.00 0.00 34.24 4.02
917 945 0.991920 CATACCCAGGGTTCAGGTGT 59.008 55.000 19.18 0.00 37.09 4.16
919 947 1.910580 CGCATACCCAGGGTTCAGGT 61.911 60.000 19.18 0.00 37.09 4.00
959 987 5.157781 GCTGTCTCGTTTATATAGAGGCTG 58.842 45.833 0.00 4.81 37.50 4.85
1012 1040 1.739466 CCACTACGCAAGCAATGTGAT 59.261 47.619 9.69 0.00 42.32 3.06
1042 1070 5.594725 TCTCTTGTTTCTATGGTAGCTCGAT 59.405 40.000 0.00 0.00 0.00 3.59
1057 1085 5.596361 TCTTCTCTCACTCACTCTCTTGTTT 59.404 40.000 0.00 0.00 0.00 2.83
1085 1113 2.613223 CGTTTCCAAGTCTTCCTCCTCC 60.613 54.545 0.00 0.00 0.00 4.30
1091 1119 5.244785 ACTTTTTCGTTTCCAAGTCTTCC 57.755 39.130 0.00 0.00 0.00 3.46
1092 1120 6.804783 TCAAACTTTTTCGTTTCCAAGTCTTC 59.195 34.615 0.00 0.00 35.06 2.87
1093 1121 6.683715 TCAAACTTTTTCGTTTCCAAGTCTT 58.316 32.000 0.00 0.00 35.06 3.01
1094 1122 6.262193 TCAAACTTTTTCGTTTCCAAGTCT 57.738 33.333 0.00 0.00 35.06 3.24
1095 1123 6.584942 ACTTCAAACTTTTTCGTTTCCAAGTC 59.415 34.615 0.00 0.00 34.79 3.01
1096 1124 6.364976 CACTTCAAACTTTTTCGTTTCCAAGT 59.635 34.615 0.00 0.00 37.44 3.16
1101 1129 7.241376 TCTCTCACTTCAAACTTTTTCGTTTC 58.759 34.615 0.00 0.00 35.06 2.78
1104 1132 6.292381 CGATCTCTCACTTCAAACTTTTTCGT 60.292 38.462 0.00 0.00 0.00 3.85
1105 1133 6.067669 CGATCTCTCACTTCAAACTTTTTCG 58.932 40.000 0.00 0.00 0.00 3.46
1107 1135 6.986817 TCTCGATCTCTCACTTCAAACTTTTT 59.013 34.615 0.00 0.00 0.00 1.94
1149 1180 3.005554 CACATCGCTCAGAACTTTCCAT 58.994 45.455 0.00 0.00 0.00 3.41
1272 1303 1.300971 CGACGAGGTTCCGGTAGACA 61.301 60.000 0.00 0.00 0.00 3.41
1365 1404 0.313043 GCCATGATATGCACTGCACC 59.687 55.000 5.67 0.00 43.04 5.01
1366 1405 0.313043 GGCCATGATATGCACTGCAC 59.687 55.000 5.67 0.00 43.04 4.57
1367 1406 0.184211 AGGCCATGATATGCACTGCA 59.816 50.000 5.01 6.09 44.86 4.41
1368 1407 2.082231 CTAGGCCATGATATGCACTGC 58.918 52.381 5.01 0.00 0.00 4.40
1369 1408 3.413846 ACTAGGCCATGATATGCACTG 57.586 47.619 5.01 0.00 0.00 3.66
1370 1409 4.392940 GAAACTAGGCCATGATATGCACT 58.607 43.478 5.01 0.00 0.00 4.40
1387 1510 1.304381 ATGCATGCACGGGGAAACT 60.304 52.632 25.37 0.00 0.00 2.66
1393 1524 0.173935 ATTTCACATGCATGCACGGG 59.826 50.000 25.37 18.01 0.00 5.28
1394 1525 2.097954 AGTATTTCACATGCATGCACGG 59.902 45.455 25.37 20.51 0.00 4.94
1395 1526 3.409851 AGTATTTCACATGCATGCACG 57.590 42.857 25.37 19.13 0.00 5.34
1396 1527 4.990257 AGAAGTATTTCACATGCATGCAC 58.010 39.130 25.37 13.79 35.70 4.57
1397 1528 5.643664 GAAGAAGTATTTCACATGCATGCA 58.356 37.500 26.53 25.04 35.70 3.96
1410 1541 9.765795 CTCATATTTAGGAACCGAAGAAGTATT 57.234 33.333 0.00 0.00 0.00 1.89
1411 1542 9.144298 TCTCATATTTAGGAACCGAAGAAGTAT 57.856 33.333 0.00 0.00 0.00 2.12
1412 1543 8.411683 GTCTCATATTTAGGAACCGAAGAAGTA 58.588 37.037 0.00 0.00 0.00 2.24
1413 1544 7.266400 GTCTCATATTTAGGAACCGAAGAAGT 58.734 38.462 0.00 0.00 0.00 3.01
1414 1545 6.702282 GGTCTCATATTTAGGAACCGAAGAAG 59.298 42.308 0.00 0.00 0.00 2.85
1415 1546 6.383147 AGGTCTCATATTTAGGAACCGAAGAA 59.617 38.462 0.00 0.00 0.00 2.52
1416 1547 5.897824 AGGTCTCATATTTAGGAACCGAAGA 59.102 40.000 0.00 0.00 0.00 2.87
1417 1548 6.163135 AGGTCTCATATTTAGGAACCGAAG 57.837 41.667 0.00 0.00 0.00 3.79
1418 1549 6.070424 ACAAGGTCTCATATTTAGGAACCGAA 60.070 38.462 0.00 0.00 0.00 4.30
1419 1550 5.424252 ACAAGGTCTCATATTTAGGAACCGA 59.576 40.000 0.00 0.00 0.00 4.69
1420 1551 5.671493 ACAAGGTCTCATATTTAGGAACCG 58.329 41.667 0.00 0.00 0.00 4.44
1422 1553 9.886132 TCTTTACAAGGTCTCATATTTAGGAAC 57.114 33.333 0.00 0.00 0.00 3.62
1433 1564 9.031537 TCATAGTGTAATCTTTACAAGGTCTCA 57.968 33.333 1.89 0.00 0.00 3.27
1434 1565 9.871238 TTCATAGTGTAATCTTTACAAGGTCTC 57.129 33.333 1.89 0.00 0.00 3.36
1435 1566 9.654663 GTTCATAGTGTAATCTTTACAAGGTCT 57.345 33.333 1.89 0.00 0.00 3.85
1436 1567 9.654663 AGTTCATAGTGTAATCTTTACAAGGTC 57.345 33.333 1.89 0.00 0.00 3.85
1493 1624 5.565259 CGAAGCAAAATGAGTGAATGTACAC 59.435 40.000 0.00 0.00 40.60 2.90
1494 1625 5.238432 ACGAAGCAAAATGAGTGAATGTACA 59.762 36.000 0.00 0.00 0.00 2.90
1495 1626 5.689819 ACGAAGCAAAATGAGTGAATGTAC 58.310 37.500 0.00 0.00 0.00 2.90
1496 1627 5.940192 ACGAAGCAAAATGAGTGAATGTA 57.060 34.783 0.00 0.00 0.00 2.29
1497 1628 4.836125 ACGAAGCAAAATGAGTGAATGT 57.164 36.364 0.00 0.00 0.00 2.71
1498 1629 9.803130 CTATATACGAAGCAAAATGAGTGAATG 57.197 33.333 0.00 0.00 0.00 2.67
1499 1630 9.547753 ACTATATACGAAGCAAAATGAGTGAAT 57.452 29.630 0.00 0.00 0.00 2.57
1500 1631 8.942338 ACTATATACGAAGCAAAATGAGTGAA 57.058 30.769 0.00 0.00 0.00 3.18
1501 1632 8.942338 AACTATATACGAAGCAAAATGAGTGA 57.058 30.769 0.00 0.00 0.00 3.41
1559 1690 9.412460 TCAATCCTATACTACTCCTTTCGTTTA 57.588 33.333 0.00 0.00 0.00 2.01
1560 1691 8.302515 TCAATCCTATACTACTCCTTTCGTTT 57.697 34.615 0.00 0.00 0.00 3.60
1561 1692 7.893124 TCAATCCTATACTACTCCTTTCGTT 57.107 36.000 0.00 0.00 0.00 3.85
1562 1693 7.506261 ACATCAATCCTATACTACTCCTTTCGT 59.494 37.037 0.00 0.00 0.00 3.85
1563 1694 7.810282 CACATCAATCCTATACTACTCCTTTCG 59.190 40.741 0.00 0.00 0.00 3.46
1564 1695 7.600752 GCACATCAATCCTATACTACTCCTTTC 59.399 40.741 0.00 0.00 0.00 2.62
1565 1696 7.071196 TGCACATCAATCCTATACTACTCCTTT 59.929 37.037 0.00 0.00 0.00 3.11
1566 1697 6.554982 TGCACATCAATCCTATACTACTCCTT 59.445 38.462 0.00 0.00 0.00 3.36
1567 1698 6.077993 TGCACATCAATCCTATACTACTCCT 58.922 40.000 0.00 0.00 0.00 3.69
1568 1699 6.346477 TGCACATCAATCCTATACTACTCC 57.654 41.667 0.00 0.00 0.00 3.85
1569 1700 6.312426 GCATGCACATCAATCCTATACTACTC 59.688 42.308 14.21 0.00 0.00 2.59
1570 1701 6.169094 GCATGCACATCAATCCTATACTACT 58.831 40.000 14.21 0.00 0.00 2.57
1571 1702 5.352569 GGCATGCACATCAATCCTATACTAC 59.647 44.000 21.36 0.00 0.00 2.73
1572 1703 5.012975 TGGCATGCACATCAATCCTATACTA 59.987 40.000 21.36 0.00 0.00 1.82
1573 1704 4.202493 TGGCATGCACATCAATCCTATACT 60.202 41.667 21.36 0.00 0.00 2.12
1574 1705 4.074259 TGGCATGCACATCAATCCTATAC 58.926 43.478 21.36 0.00 0.00 1.47
1575 1706 4.074259 GTGGCATGCACATCAATCCTATA 58.926 43.478 21.36 0.00 0.00 1.31
1578 1709 1.108776 GTGGCATGCACATCAATCCT 58.891 50.000 21.36 0.00 0.00 3.24
1618 1749 2.868839 GCACTGGCATGCACATCTTTTT 60.869 45.455 21.36 0.00 45.39 1.94
1619 1750 1.337447 GCACTGGCATGCACATCTTTT 60.337 47.619 21.36 0.00 45.39 2.27
1620 1751 0.245539 GCACTGGCATGCACATCTTT 59.754 50.000 21.36 0.00 45.39 2.52
1621 1752 1.888018 GCACTGGCATGCACATCTT 59.112 52.632 21.36 0.27 45.39 2.40
1622 1753 3.599584 GCACTGGCATGCACATCT 58.400 55.556 21.36 0.83 45.39 2.90
1650 1781 3.353836 GGCAACGGACGTGCATGT 61.354 61.111 12.38 12.38 0.00 3.21
1657 1788 0.506506 GCAAAAATTGGCAACGGACG 59.493 50.000 0.00 0.00 42.51 4.79
1660 1791 1.263752 CCAAGCAAAAATTGGCAACGG 59.736 47.619 0.00 0.00 40.74 4.44
1675 1810 9.929180 TCATATCTATAGTATGTTTGTCCAAGC 57.071 33.333 15.76 0.00 32.63 4.01
1689 1824 7.831691 AGCACTGACAGTTCATATCTATAGT 57.168 36.000 5.04 0.00 0.00 2.12
1691 1826 8.926092 ACTAGCACTGACAGTTCATATCTATA 57.074 34.615 5.04 0.00 0.00 1.31
1698 1833 3.306364 GGTGACTAGCACTGACAGTTCAT 60.306 47.826 5.04 0.00 46.86 2.57
1699 1834 2.035961 GGTGACTAGCACTGACAGTTCA 59.964 50.000 5.04 4.02 46.86 3.18
1701 1836 2.039418 TGGTGACTAGCACTGACAGTT 58.961 47.619 5.04 0.00 46.86 3.16
1710 1845 1.300620 GCGTGTGTGGTGACTAGCA 60.301 57.895 0.00 0.00 0.00 3.49
1713 1848 0.313987 CTCTGCGTGTGTGGTGACTA 59.686 55.000 0.00 0.00 0.00 2.59
1726 1947 1.732259 GTGATGGTTTGGTACTCTGCG 59.268 52.381 0.00 0.00 0.00 5.18
1727 1948 2.744202 CTGTGATGGTTTGGTACTCTGC 59.256 50.000 0.00 0.00 0.00 4.26
1728 1949 3.007940 TCCTGTGATGGTTTGGTACTCTG 59.992 47.826 0.00 0.00 0.00 3.35
1729 1950 3.248024 TCCTGTGATGGTTTGGTACTCT 58.752 45.455 0.00 0.00 0.00 3.24
1733 1954 2.344592 ACCTCCTGTGATGGTTTGGTA 58.655 47.619 0.00 0.00 0.00 3.25
1734 1955 1.149101 ACCTCCTGTGATGGTTTGGT 58.851 50.000 0.00 0.00 0.00 3.67
1749 1970 0.682209 ATGCATGTTGGAGCCACCTC 60.682 55.000 0.00 0.00 39.86 3.85
1751 1972 1.514087 CATGCATGTTGGAGCCACC 59.486 57.895 18.91 0.00 39.54 4.61
1752 1973 1.153706 GCATGCATGTTGGAGCCAC 60.154 57.895 26.79 4.06 0.00 5.01
1754 1975 1.153706 GTGCATGCATGTTGGAGCC 60.154 57.895 25.64 9.65 0.00 4.70
1814 2203 9.751542 CCCTCTGTAAACTAATGTAGTAAGATG 57.248 37.037 0.00 0.00 38.26 2.90
1815 2204 9.710818 TCCCTCTGTAAACTAATGTAGTAAGAT 57.289 33.333 0.00 0.00 38.26 2.40
1819 2208 9.624373 CTACTCCCTCTGTAAACTAATGTAGTA 57.376 37.037 0.00 0.00 38.26 1.82
1820 2209 8.114743 ACTACTCCCTCTGTAAACTAATGTAGT 58.885 37.037 0.00 0.00 41.73 2.73
1823 2212 7.793948 AACTACTCCCTCTGTAAACTAATGT 57.206 36.000 0.00 0.00 0.00 2.71
1824 2213 9.503399 AAAAACTACTCCCTCTGTAAACTAATG 57.497 33.333 0.00 0.00 0.00 1.90
1826 2215 9.987272 GTAAAAACTACTCCCTCTGTAAACTAA 57.013 33.333 0.00 0.00 0.00 2.24
1827 2216 8.588472 GGTAAAAACTACTCCCTCTGTAAACTA 58.412 37.037 0.00 0.00 0.00 2.24
1828 2217 7.071572 TGGTAAAAACTACTCCCTCTGTAAACT 59.928 37.037 0.00 0.00 0.00 2.66
1829 2218 7.172190 GTGGTAAAAACTACTCCCTCTGTAAAC 59.828 40.741 0.00 0.00 0.00 2.01
1830 2219 7.147514 TGTGGTAAAAACTACTCCCTCTGTAAA 60.148 37.037 0.00 0.00 0.00 2.01
1831 2220 6.327104 TGTGGTAAAAACTACTCCCTCTGTAA 59.673 38.462 0.00 0.00 0.00 2.41
1832 2221 5.840149 TGTGGTAAAAACTACTCCCTCTGTA 59.160 40.000 0.00 0.00 0.00 2.74
1833 2222 4.657039 TGTGGTAAAAACTACTCCCTCTGT 59.343 41.667 0.00 0.00 0.00 3.41
1834 2223 4.995487 GTGTGGTAAAAACTACTCCCTCTG 59.005 45.833 0.00 0.00 0.00 3.35
1835 2224 4.657039 TGTGTGGTAAAAACTACTCCCTCT 59.343 41.667 0.00 0.00 0.00 3.69
1836 2225 4.964593 TGTGTGGTAAAAACTACTCCCTC 58.035 43.478 0.00 0.00 0.00 4.30
1837 2226 5.104235 AGTTGTGTGGTAAAAACTACTCCCT 60.104 40.000 0.00 0.00 31.26 4.20
1838 2227 5.008316 CAGTTGTGTGGTAAAAACTACTCCC 59.992 44.000 0.00 0.00 31.80 4.30
1839 2228 5.505159 GCAGTTGTGTGGTAAAAACTACTCC 60.505 44.000 0.00 0.00 31.80 3.85
1840 2229 5.065474 TGCAGTTGTGTGGTAAAAACTACTC 59.935 40.000 0.00 0.00 31.80 2.59
1841 2230 4.944930 TGCAGTTGTGTGGTAAAAACTACT 59.055 37.500 0.00 0.00 31.80 2.57
1851 2240 0.680921 AAGTGCTGCAGTTGTGTGGT 60.681 50.000 21.09 0.00 0.00 4.16
1854 2243 1.308998 GGTAAGTGCTGCAGTTGTGT 58.691 50.000 28.11 8.60 0.00 3.72
1859 2248 3.433306 TTATTGGGTAAGTGCTGCAGT 57.567 42.857 16.64 2.34 0.00 4.40
1871 2260 6.575244 TTCCAGTAGTCATCATTATTGGGT 57.425 37.500 0.00 0.00 30.17 4.51
1873 2262 5.471456 GGCTTCCAGTAGTCATCATTATTGG 59.529 44.000 0.00 0.00 0.00 3.16
1876 2265 4.262635 CGGGCTTCCAGTAGTCATCATTAT 60.263 45.833 0.00 0.00 0.00 1.28
1877 2266 3.069586 CGGGCTTCCAGTAGTCATCATTA 59.930 47.826 0.00 0.00 0.00 1.90
1887 2276 3.873781 CCATTTCGGGCTTCCAGTA 57.126 52.632 0.00 0.00 0.00 2.74
1888 2277 4.743018 CCATTTCGGGCTTCCAGT 57.257 55.556 0.00 0.00 0.00 4.00
1913 2302 5.285134 CGCAAAAAGAAAACGAGAACTCAAA 59.715 36.000 0.00 0.00 0.00 2.69
1916 2305 3.724257 CCGCAAAAAGAAAACGAGAACTC 59.276 43.478 0.00 0.00 0.00 3.01
1928 2322 0.395862 TGGAACACCCCGCAAAAAGA 60.396 50.000 0.00 0.00 0.00 2.52
1929 2323 0.031994 CTGGAACACCCCGCAAAAAG 59.968 55.000 0.00 0.00 0.00 2.27
1930 2324 2.022240 GCTGGAACACCCCGCAAAAA 62.022 55.000 0.00 0.00 43.70 1.94
1931 2325 2.494530 GCTGGAACACCCCGCAAAA 61.495 57.895 0.00 0.00 43.70 2.44
1932 2326 2.909965 GCTGGAACACCCCGCAAA 60.910 61.111 0.00 0.00 43.70 3.68
1933 2327 3.842925 GAGCTGGAACACCCCGCAA 62.843 63.158 0.00 0.00 46.29 4.85
1934 2328 4.329545 GAGCTGGAACACCCCGCA 62.330 66.667 0.00 0.00 46.29 5.69
1935 2329 3.959991 GAGAGCTGGAACACCCCGC 62.960 68.421 0.00 0.00 44.48 6.13
1936 2330 1.903877 ATGAGAGCTGGAACACCCCG 61.904 60.000 0.00 0.00 0.00 5.73
1937 2331 0.329596 AATGAGAGCTGGAACACCCC 59.670 55.000 0.00 0.00 0.00 4.95
1938 2332 2.206576 AAATGAGAGCTGGAACACCC 57.793 50.000 0.00 0.00 0.00 4.61
1939 2333 3.944087 ACTAAATGAGAGCTGGAACACC 58.056 45.455 0.00 0.00 0.00 4.16
1940 2334 4.092091 CGAACTAAATGAGAGCTGGAACAC 59.908 45.833 0.00 0.00 0.00 3.32
1941 2335 4.021456 TCGAACTAAATGAGAGCTGGAACA 60.021 41.667 0.00 0.00 0.00 3.18
1942 2336 4.327627 GTCGAACTAAATGAGAGCTGGAAC 59.672 45.833 0.00 0.00 0.00 3.62
1943 2337 4.021456 TGTCGAACTAAATGAGAGCTGGAA 60.021 41.667 0.00 0.00 0.00 3.53
1944 2338 3.509967 TGTCGAACTAAATGAGAGCTGGA 59.490 43.478 0.00 0.00 0.00 3.86
1945 2339 3.849911 TGTCGAACTAAATGAGAGCTGG 58.150 45.455 0.00 0.00 0.00 4.85
1946 2340 5.164233 TCTTGTCGAACTAAATGAGAGCTG 58.836 41.667 0.00 0.00 0.00 4.24
1947 2341 5.392767 TCTTGTCGAACTAAATGAGAGCT 57.607 39.130 0.00 0.00 0.00 4.09
1948 2342 6.473521 CAATCTTGTCGAACTAAATGAGAGC 58.526 40.000 0.00 0.00 0.00 4.09
1949 2343 6.473521 GCAATCTTGTCGAACTAAATGAGAG 58.526 40.000 0.00 0.00 0.00 3.20
1950 2344 5.062183 CGCAATCTTGTCGAACTAAATGAGA 59.938 40.000 0.00 0.00 32.28 3.27
1951 2345 5.062183 TCGCAATCTTGTCGAACTAAATGAG 59.938 40.000 0.00 0.00 35.17 2.90
1952 2346 4.926832 TCGCAATCTTGTCGAACTAAATGA 59.073 37.500 0.00 0.00 35.17 2.57
1953 2347 5.203358 TCGCAATCTTGTCGAACTAAATG 57.797 39.130 0.00 0.00 35.17 2.32
1955 2349 3.678072 CCTCGCAATCTTGTCGAACTAAA 59.322 43.478 9.50 0.00 36.71 1.85
1968 2362 0.181350 ATTGTCCCTCCCTCGCAATC 59.819 55.000 0.00 0.00 0.00 2.67
1972 2366 0.179081 GTACATTGTCCCTCCCTCGC 60.179 60.000 0.00 0.00 0.00 5.03
1997 2391 8.094548 GCTAATTTCCCAATATACATTTTCCCC 58.905 37.037 0.00 0.00 0.00 4.81
1998 2392 8.646900 TGCTAATTTCCCAATATACATTTTCCC 58.353 33.333 0.00 0.00 0.00 3.97
2005 2399 5.009210 GGCGTTGCTAATTTCCCAATATACA 59.991 40.000 0.00 0.00 0.00 2.29
2012 2421 1.173043 CTGGCGTTGCTAATTTCCCA 58.827 50.000 0.00 0.00 0.00 4.37
2015 2424 2.539750 GCTAGCTGGCGTTGCTAATTTC 60.540 50.000 6.22 0.00 41.70 2.17
2022 2431 3.804193 GTGGCTAGCTGGCGTTGC 61.804 66.667 16.50 2.38 45.14 4.17
2034 2443 3.374402 CTCGGTCGTGGAGTGGCT 61.374 66.667 0.00 0.00 0.00 4.75
2040 2469 4.717629 CGCTTGCTCGGTCGTGGA 62.718 66.667 0.00 0.00 0.00 4.02
2047 2476 3.932580 TAGGTGTGCGCTTGCTCGG 62.933 63.158 9.73 0.00 40.12 4.63
2063 2492 6.065153 CGAGAACGAACTGAACAAATTGTAG 58.935 40.000 0.00 0.00 42.66 2.74
2106 2535 7.094508 TGCTTCTAAATGAGACACACAAAAA 57.905 32.000 0.00 0.00 32.31 1.94
2107 2536 6.691754 TGCTTCTAAATGAGACACACAAAA 57.308 33.333 0.00 0.00 32.31 2.44
2113 3328 6.541641 AGGAATGATGCTTCTAAATGAGACAC 59.458 38.462 0.88 0.00 32.31 3.67
2127 3342 8.494433 TCTACAGGTTATAAAAGGAATGATGCT 58.506 33.333 0.00 0.00 0.00 3.79
2141 3356 9.743581 TCGTGAATATGGTATCTACAGGTTATA 57.256 33.333 0.00 0.00 0.00 0.98
2142 3357 8.645814 TCGTGAATATGGTATCTACAGGTTAT 57.354 34.615 0.00 0.00 0.00 1.89
2143 3358 8.645814 ATCGTGAATATGGTATCTACAGGTTA 57.354 34.615 0.00 0.00 0.00 2.85
2144 3359 6.971726 TCGTGAATATGGTATCTACAGGTT 57.028 37.500 0.00 0.00 0.00 3.50
2150 3365 5.941647 TGGTCGATCGTGAATATGGTATCTA 59.058 40.000 15.94 0.00 0.00 1.98
2158 3373 4.083961 CGAGTACTGGTCGATCGTGAATAT 60.084 45.833 15.94 0.60 39.92 1.28
2164 3379 0.725686 CACGAGTACTGGTCGATCGT 59.274 55.000 15.94 2.87 46.63 3.73
2186 3401 4.256180 GGATAGGCCCCGGTGCAG 62.256 72.222 12.10 0.00 0.00 4.41
2189 3404 1.418908 ATCAAGGATAGGCCCCGGTG 61.419 60.000 0.00 0.00 37.37 4.94
2193 3408 2.046280 AGGTATCAAGGATAGGCCCC 57.954 55.000 0.00 0.00 37.37 5.80
2202 3434 7.029563 GTGCAAAACAGAATAAGGTATCAAGG 58.970 38.462 0.00 0.00 0.00 3.61
2229 3461 6.536224 GTGGCAATTATTCTGCTTAATTTGCT 59.464 34.615 14.82 0.00 39.82 3.91
2235 3467 3.486708 CGCGTGGCAATTATTCTGCTTAA 60.487 43.478 0.00 0.00 39.82 1.85
2251 3494 1.080298 TATGCTGGTTTAACGCGTGG 58.920 50.000 14.98 0.00 0.00 4.94
2263 3506 3.986970 TGAGGTACGCATATGCTGG 57.013 52.632 24.56 13.02 39.32 4.85
2276 3547 0.538584 TCGATGCTGCTTGATGAGGT 59.461 50.000 0.00 0.00 0.00 3.85
2285 3562 3.087781 TCTGCTATAGATCGATGCTGCT 58.912 45.455 0.54 0.00 0.00 4.24
2302 3579 4.574013 ACTCTGCTAATTTATGCACTCTGC 59.426 41.667 0.00 0.00 45.29 4.26
2303 3580 5.503683 GCACTCTGCTAATTTATGCACTCTG 60.504 44.000 0.00 0.00 40.96 3.35
2304 3581 4.574013 GCACTCTGCTAATTTATGCACTCT 59.426 41.667 0.00 0.00 40.96 3.24
2306 3583 4.264253 TGCACTCTGCTAATTTATGCACT 58.736 39.130 0.00 0.00 45.31 4.40
2307 3584 4.621068 TGCACTCTGCTAATTTATGCAC 57.379 40.909 0.00 0.00 45.31 4.57
2313 3590 7.999679 TGCTAATTTATGCACTCTGCTAATTT 58.000 30.769 0.00 0.00 45.31 1.82
2319 3601 5.065731 ACTTCTGCTAATTTATGCACTCTGC 59.934 40.000 0.00 0.00 45.29 4.26
2330 3612 8.097038 TGTGTCATTCTCTACTTCTGCTAATTT 58.903 33.333 0.00 0.00 0.00 1.82
2360 3642 2.095466 GCGCACACAAATACCTGCTTTA 60.095 45.455 0.30 0.00 0.00 1.85
2405 3705 1.685302 GCCAAGTGCGTTTACACATG 58.315 50.000 0.00 0.00 43.23 3.21
2425 3725 3.681835 ACAGCCGAGTGGGACGTC 61.682 66.667 7.13 7.13 38.47 4.34
2428 3728 2.357517 CACACAGCCGAGTGGGAC 60.358 66.667 0.00 0.00 45.77 4.46
2440 3740 2.844195 AATCAGGGCAGGGCACACA 61.844 57.895 0.00 0.00 32.33 3.72
2444 3744 3.267233 ACCAATCAGGGCAGGGCA 61.267 61.111 0.00 0.00 43.89 5.36
2461 3761 2.523168 TCCACGCTCCACCAGTGA 60.523 61.111 0.00 0.00 38.06 3.41
2473 3773 1.144057 GCATGGTAGGACCTCCACG 59.856 63.158 13.07 7.90 39.58 4.94
2474 3774 0.839946 ATGCATGGTAGGACCTCCAC 59.160 55.000 13.07 0.77 39.58 4.02
2475 3775 0.839277 CATGCATGGTAGGACCTCCA 59.161 55.000 19.40 13.16 39.58 3.86
2476 3776 0.536006 GCATGCATGGTAGGACCTCC 60.536 60.000 27.34 3.43 39.58 4.30
2477 3777 0.181114 TGCATGCATGGTAGGACCTC 59.819 55.000 27.34 8.37 39.58 3.85
2479 3779 3.426903 ATGCATGCATGGTAGGACC 57.573 52.632 31.74 9.80 39.22 4.46
2488 3788 0.615261 TGTGGGTTCCATGCATGCAT 60.615 50.000 27.46 27.46 35.28 3.96
2489 3789 0.615261 ATGTGGGTTCCATGCATGCA 60.615 50.000 25.04 25.04 35.28 3.96
2490 3790 0.179094 CATGTGGGTTCCATGCATGC 60.179 55.000 21.69 11.82 33.45 4.06
2512 3821 3.801698 ACTAGTATGCATGCTTCCACAG 58.198 45.455 22.76 15.16 0.00 3.66
2513 3822 3.912496 ACTAGTATGCATGCTTCCACA 57.088 42.857 22.76 3.30 0.00 4.17
2514 3823 4.950050 ACTACTAGTATGCATGCTTCCAC 58.050 43.478 22.76 8.73 0.00 4.02
2555 4568 9.319143 CTTTCATGAACCAGATTTAGGTAGTAG 57.681 37.037 7.89 0.00 38.76 2.57
2557 4570 7.918076 TCTTTCATGAACCAGATTTAGGTAGT 58.082 34.615 7.89 0.00 38.76 2.73
2609 4633 0.368907 CCTGCACATGTTACGTACGC 59.631 55.000 16.72 0.00 0.00 4.42
2610 4634 0.996462 CCCTGCACATGTTACGTACG 59.004 55.000 15.01 15.01 0.00 3.67
2611 4635 1.066716 TCCCCTGCACATGTTACGTAC 60.067 52.381 0.00 0.00 0.00 3.67
2612 4636 1.066716 GTCCCCTGCACATGTTACGTA 60.067 52.381 0.00 0.00 0.00 3.57
2613 4637 0.321298 GTCCCCTGCACATGTTACGT 60.321 55.000 0.00 0.00 0.00 3.57
2614 4638 0.036388 AGTCCCCTGCACATGTTACG 60.036 55.000 0.00 0.00 0.00 3.18
2615 4639 1.003118 TCAGTCCCCTGCACATGTTAC 59.997 52.381 0.00 0.00 38.66 2.50
2652 4711 4.349048 CCCATGATCTTGAGGAAGATGGTA 59.651 45.833 10.07 0.00 47.00 3.25
2702 4765 3.800506 GGACGATCGAATTAATCAACCGT 59.199 43.478 24.34 0.00 0.00 4.83
2722 4785 0.759060 ATGGATGGATGGACGACGGA 60.759 55.000 0.00 0.00 0.00 4.69
2810 4908 3.031736 GCCCATGTAGTAGAGGTTCTGA 58.968 50.000 0.00 0.00 0.00 3.27
3489 5599 3.879295 CGATCCTGACATGGTAGCAAAAT 59.121 43.478 0.00 0.00 0.00 1.82
3531 5643 0.940519 TCACCGAAAAATCGCGACGT 60.941 50.000 12.93 0.00 0.00 4.34
3536 5648 3.064820 ACATATGGTCACCGAAAAATCGC 59.935 43.478 7.80 0.00 0.00 4.58
3719 5853 0.765510 AATACTTCCTCCATCCGGGC 59.234 55.000 0.00 0.00 36.21 6.13
3723 5857 6.651225 GCACTAATGTAATACTTCCTCCATCC 59.349 42.308 0.00 0.00 0.00 3.51
3728 5862 7.843490 TGTTGCACTAATGTAATACTTCCTC 57.157 36.000 0.00 0.00 32.67 3.71
3879 6044 1.339097 CCCTTGCTACTACCGGCTAT 58.661 55.000 0.00 0.00 0.00 2.97
3960 6134 2.251371 GCCGTTGAACTTGCCGTC 59.749 61.111 0.00 0.00 0.00 4.79
4059 6242 9.537852 TTACCAGGAAAATAGTTAGACAGACTA 57.462 33.333 0.00 0.00 34.38 2.59
4194 6381 1.135939 CACGTACATGCGGTCTCGA 59.864 57.895 0.00 0.00 39.00 4.04
4234 6421 6.597280 AGATGAGTTTTAGGCATTCTCAAGTC 59.403 38.462 0.00 0.00 38.38 3.01
4263 6450 8.695456 AGGTGAATAAGGCCAAACTATATTTTG 58.305 33.333 5.01 8.25 36.40 2.44
4266 6453 7.502561 GTCAGGTGAATAAGGCCAAACTATATT 59.497 37.037 5.01 0.00 0.00 1.28
4340 6527 9.997482 GATGAATAAAATTTCAGGCGTTACTAA 57.003 29.630 0.00 0.00 38.90 2.24
4341 6528 9.391006 AGATGAATAAAATTTCAGGCGTTACTA 57.609 29.630 0.00 0.00 38.90 1.82
4342 6529 8.281212 AGATGAATAAAATTTCAGGCGTTACT 57.719 30.769 0.00 0.00 38.90 2.24
4343 6530 8.911247 AAGATGAATAAAATTTCAGGCGTTAC 57.089 30.769 0.00 0.00 38.90 2.50
4345 6532 9.353999 GTAAAGATGAATAAAATTTCAGGCGTT 57.646 29.630 0.00 0.00 38.90 4.84
4346 6533 7.973944 GGTAAAGATGAATAAAATTTCAGGCGT 59.026 33.333 0.00 0.00 38.90 5.68
4347 6534 8.190784 AGGTAAAGATGAATAAAATTTCAGGCG 58.809 33.333 0.00 0.00 38.90 5.52
4910 7111 4.346418 AGTGGGGTGTTTATTTGCAATCAA 59.654 37.500 0.00 0.00 0.00 2.57
4911 7112 3.900601 AGTGGGGTGTTTATTTGCAATCA 59.099 39.130 0.00 0.00 0.00 2.57
4995 7196 7.715249 CGATGAGAAATCTATTGTTTTCCCCTA 59.285 37.037 6.97 0.00 34.25 3.53
5039 7240 3.309296 TCTCCCTCTCTCTCTCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
5040 7241 3.051803 TCTCTCCCTCTCTCTCTCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.