Multiple sequence alignment - TraesCS6B01G358700
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6B01G358700 | chr6B | 100.000 | 3467 | 0 | 0 | 1 | 3467 | 626881497 | 626884963 | 0.000000e+00 | 6403.0 |
1 | TraesCS6B01G358700 | chr6B | 96.410 | 1504 | 52 | 2 | 983 | 2486 | 626811889 | 626813390 | 0.000000e+00 | 2477.0 |
2 | TraesCS6B01G358700 | chr6B | 91.882 | 1626 | 115 | 8 | 845 | 2458 | 626590758 | 626589138 | 0.000000e+00 | 2255.0 |
3 | TraesCS6B01G358700 | chr6B | 93.057 | 1498 | 103 | 1 | 978 | 2475 | 626458122 | 626456626 | 0.000000e+00 | 2189.0 |
4 | TraesCS6B01G358700 | chr6B | 85.299 | 619 | 67 | 15 | 242 | 845 | 256476759 | 256477368 | 4.920000e-173 | 617.0 |
5 | TraesCS6B01G358700 | chr6B | 94.771 | 153 | 5 | 3 | 845 | 997 | 626811721 | 626811870 | 5.780000e-58 | 235.0 |
6 | TraesCS6B01G358700 | chr6B | 85.714 | 196 | 17 | 9 | 6 | 193 | 234677302 | 234677110 | 2.730000e-46 | 196.0 |
7 | TraesCS6B01G358700 | chr6B | 81.633 | 196 | 30 | 5 | 1 | 194 | 635165294 | 635165103 | 1.290000e-34 | 158.0 |
8 | TraesCS6B01G358700 | chr6B | 81.967 | 122 | 12 | 5 | 80 | 193 | 624661758 | 624661639 | 1.020000e-15 | 95.3 |
9 | TraesCS6B01G358700 | chr6B | 96.154 | 52 | 1 | 1 | 2546 | 2596 | 626813473 | 626813524 | 2.220000e-12 | 84.2 |
10 | TraesCS6B01G358700 | chr6B | 89.474 | 57 | 5 | 1 | 2512 | 2567 | 626456514 | 626456458 | 1.730000e-08 | 71.3 |
11 | TraesCS6B01G358700 | chr6A | 93.133 | 1529 | 101 | 4 | 949 | 2475 | 560567628 | 560569154 | 0.000000e+00 | 2239.0 |
12 | TraesCS6B01G358700 | chr6A | 91.246 | 971 | 85 | 0 | 1488 | 2458 | 560104775 | 560103805 | 0.000000e+00 | 1323.0 |
13 | TraesCS6B01G358700 | chr6D | 92.754 | 1518 | 109 | 1 | 969 | 2486 | 417890729 | 417892245 | 0.000000e+00 | 2193.0 |
14 | TraesCS6B01G358700 | chr6D | 92.158 | 1492 | 112 | 4 | 969 | 2458 | 417695284 | 417693796 | 0.000000e+00 | 2102.0 |
15 | TraesCS6B01G358700 | chr6D | 96.682 | 844 | 26 | 2 | 2624 | 3467 | 235779245 | 235778404 | 0.000000e+00 | 1402.0 |
16 | TraesCS6B01G358700 | chr4B | 97.156 | 844 | 24 | 0 | 2624 | 3467 | 376255667 | 376256510 | 0.000000e+00 | 1426.0 |
17 | TraesCS6B01G358700 | chr4B | 96.450 | 845 | 28 | 2 | 2624 | 3467 | 479403593 | 479402750 | 0.000000e+00 | 1393.0 |
18 | TraesCS6B01G358700 | chr2B | 97.156 | 844 | 24 | 0 | 2624 | 3467 | 429166499 | 429165656 | 0.000000e+00 | 1426.0 |
19 | TraesCS6B01G358700 | chr2B | 92.857 | 112 | 6 | 2 | 8 | 118 | 774837712 | 774837602 | 9.960000e-36 | 161.0 |
20 | TraesCS6B01G358700 | chr1B | 96.801 | 844 | 27 | 0 | 2624 | 3467 | 256209693 | 256208850 | 0.000000e+00 | 1410.0 |
21 | TraesCS6B01G358700 | chr1B | 96.801 | 844 | 27 | 0 | 2624 | 3467 | 668915831 | 668914988 | 0.000000e+00 | 1410.0 |
22 | TraesCS6B01G358700 | chr1B | 85.390 | 616 | 75 | 8 | 242 | 847 | 381380356 | 381380966 | 2.940000e-175 | 625.0 |
23 | TraesCS6B01G358700 | chr1B | 83.459 | 665 | 76 | 18 | 197 | 845 | 76146320 | 76146966 | 3.850000e-164 | 588.0 |
24 | TraesCS6B01G358700 | chr1B | 85.864 | 191 | 17 | 9 | 10 | 194 | 488477752 | 488477938 | 9.820000e-46 | 195.0 |
25 | TraesCS6B01G358700 | chr1B | 82.123 | 179 | 25 | 7 | 19 | 193 | 559124994 | 559124819 | 2.790000e-31 | 147.0 |
26 | TraesCS6B01G358700 | chr5B | 96.445 | 844 | 30 | 0 | 2624 | 3467 | 368697096 | 368696253 | 0.000000e+00 | 1393.0 |
27 | TraesCS6B01G358700 | chr5B | 78.788 | 198 | 35 | 6 | 1 | 193 | 618209821 | 618209626 | 3.630000e-25 | 126.0 |
28 | TraesCS6B01G358700 | chr1A | 94.055 | 841 | 49 | 1 | 2624 | 3464 | 280489579 | 280490418 | 0.000000e+00 | 1275.0 |
29 | TraesCS6B01G358700 | chr1D | 85.984 | 849 | 114 | 5 | 2621 | 3467 | 487693262 | 487694107 | 0.000000e+00 | 904.0 |
30 | TraesCS6B01G358700 | chr4A | 85.607 | 667 | 65 | 21 | 197 | 845 | 662390853 | 662390200 | 0.000000e+00 | 671.0 |
31 | TraesCS6B01G358700 | chr3B | 85.581 | 645 | 63 | 21 | 194 | 819 | 123479639 | 123479006 | 0.000000e+00 | 649.0 |
32 | TraesCS6B01G358700 | chr3B | 84.101 | 673 | 72 | 18 | 199 | 847 | 41562253 | 41561592 | 4.920000e-173 | 617.0 |
33 | TraesCS6B01G358700 | chr3B | 86.732 | 407 | 39 | 8 | 451 | 845 | 720744843 | 720744440 | 4.110000e-119 | 438.0 |
34 | TraesCS6B01G358700 | chr5A | 84.848 | 660 | 80 | 16 | 197 | 845 | 423550628 | 423551278 | 0.000000e+00 | 647.0 |
35 | TraesCS6B01G358700 | chr7B | 83.852 | 675 | 70 | 20 | 199 | 843 | 654170355 | 654171020 | 1.060000e-169 | 606.0 |
36 | TraesCS6B01G358700 | chr7B | 84.800 | 625 | 64 | 22 | 242 | 845 | 10914341 | 10914955 | 1.780000e-167 | 599.0 |
37 | TraesCS6B01G358700 | chr7B | 89.119 | 193 | 16 | 3 | 1 | 191 | 707017360 | 707017549 | 5.780000e-58 | 235.0 |
38 | TraesCS6B01G358700 | chr5D | 83.866 | 657 | 83 | 21 | 198 | 843 | 362554819 | 362555463 | 3.830000e-169 | 604.0 |
39 | TraesCS6B01G358700 | chr4D | 75.569 | 483 | 87 | 18 | 1 | 470 | 463920984 | 463921448 | 3.510000e-50 | 209.0 |
40 | TraesCS6B01G358700 | chr7D | 83.505 | 194 | 25 | 6 | 1 | 189 | 602912281 | 602912472 | 1.280000e-39 | 174.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6B01G358700 | chr6B | 626881497 | 626884963 | 3466 | False | 6403.000000 | 6403 | 100.000000 | 1 | 3467 | 1 | chr6B.!!$F2 | 3466 |
1 | TraesCS6B01G358700 | chr6B | 626589138 | 626590758 | 1620 | True | 2255.000000 | 2255 | 91.882000 | 845 | 2458 | 1 | chr6B.!!$R3 | 1613 |
2 | TraesCS6B01G358700 | chr6B | 626456458 | 626458122 | 1664 | True | 1130.150000 | 2189 | 91.265500 | 978 | 2567 | 2 | chr6B.!!$R5 | 1589 |
3 | TraesCS6B01G358700 | chr6B | 626811721 | 626813524 | 1803 | False | 932.066667 | 2477 | 95.778333 | 845 | 2596 | 3 | chr6B.!!$F3 | 1751 |
4 | TraesCS6B01G358700 | chr6B | 256476759 | 256477368 | 609 | False | 617.000000 | 617 | 85.299000 | 242 | 845 | 1 | chr6B.!!$F1 | 603 |
5 | TraesCS6B01G358700 | chr6A | 560567628 | 560569154 | 1526 | False | 2239.000000 | 2239 | 93.133000 | 949 | 2475 | 1 | chr6A.!!$F1 | 1526 |
6 | TraesCS6B01G358700 | chr6A | 560103805 | 560104775 | 970 | True | 1323.000000 | 1323 | 91.246000 | 1488 | 2458 | 1 | chr6A.!!$R1 | 970 |
7 | TraesCS6B01G358700 | chr6D | 417890729 | 417892245 | 1516 | False | 2193.000000 | 2193 | 92.754000 | 969 | 2486 | 1 | chr6D.!!$F1 | 1517 |
8 | TraesCS6B01G358700 | chr6D | 417693796 | 417695284 | 1488 | True | 2102.000000 | 2102 | 92.158000 | 969 | 2458 | 1 | chr6D.!!$R2 | 1489 |
9 | TraesCS6B01G358700 | chr6D | 235778404 | 235779245 | 841 | True | 1402.000000 | 1402 | 96.682000 | 2624 | 3467 | 1 | chr6D.!!$R1 | 843 |
10 | TraesCS6B01G358700 | chr4B | 376255667 | 376256510 | 843 | False | 1426.000000 | 1426 | 97.156000 | 2624 | 3467 | 1 | chr4B.!!$F1 | 843 |
11 | TraesCS6B01G358700 | chr4B | 479402750 | 479403593 | 843 | True | 1393.000000 | 1393 | 96.450000 | 2624 | 3467 | 1 | chr4B.!!$R1 | 843 |
12 | TraesCS6B01G358700 | chr2B | 429165656 | 429166499 | 843 | True | 1426.000000 | 1426 | 97.156000 | 2624 | 3467 | 1 | chr2B.!!$R1 | 843 |
13 | TraesCS6B01G358700 | chr1B | 256208850 | 256209693 | 843 | True | 1410.000000 | 1410 | 96.801000 | 2624 | 3467 | 1 | chr1B.!!$R1 | 843 |
14 | TraesCS6B01G358700 | chr1B | 668914988 | 668915831 | 843 | True | 1410.000000 | 1410 | 96.801000 | 2624 | 3467 | 1 | chr1B.!!$R3 | 843 |
15 | TraesCS6B01G358700 | chr1B | 381380356 | 381380966 | 610 | False | 625.000000 | 625 | 85.390000 | 242 | 847 | 1 | chr1B.!!$F2 | 605 |
16 | TraesCS6B01G358700 | chr1B | 76146320 | 76146966 | 646 | False | 588.000000 | 588 | 83.459000 | 197 | 845 | 1 | chr1B.!!$F1 | 648 |
17 | TraesCS6B01G358700 | chr5B | 368696253 | 368697096 | 843 | True | 1393.000000 | 1393 | 96.445000 | 2624 | 3467 | 1 | chr5B.!!$R1 | 843 |
18 | TraesCS6B01G358700 | chr1A | 280489579 | 280490418 | 839 | False | 1275.000000 | 1275 | 94.055000 | 2624 | 3464 | 1 | chr1A.!!$F1 | 840 |
19 | TraesCS6B01G358700 | chr1D | 487693262 | 487694107 | 845 | False | 904.000000 | 904 | 85.984000 | 2621 | 3467 | 1 | chr1D.!!$F1 | 846 |
20 | TraesCS6B01G358700 | chr4A | 662390200 | 662390853 | 653 | True | 671.000000 | 671 | 85.607000 | 197 | 845 | 1 | chr4A.!!$R1 | 648 |
21 | TraesCS6B01G358700 | chr3B | 123479006 | 123479639 | 633 | True | 649.000000 | 649 | 85.581000 | 194 | 819 | 1 | chr3B.!!$R2 | 625 |
22 | TraesCS6B01G358700 | chr3B | 41561592 | 41562253 | 661 | True | 617.000000 | 617 | 84.101000 | 199 | 847 | 1 | chr3B.!!$R1 | 648 |
23 | TraesCS6B01G358700 | chr5A | 423550628 | 423551278 | 650 | False | 647.000000 | 647 | 84.848000 | 197 | 845 | 1 | chr5A.!!$F1 | 648 |
24 | TraesCS6B01G358700 | chr7B | 654170355 | 654171020 | 665 | False | 606.000000 | 606 | 83.852000 | 199 | 843 | 1 | chr7B.!!$F2 | 644 |
25 | TraesCS6B01G358700 | chr7B | 10914341 | 10914955 | 614 | False | 599.000000 | 599 | 84.800000 | 242 | 845 | 1 | chr7B.!!$F1 | 603 |
26 | TraesCS6B01G358700 | chr5D | 362554819 | 362555463 | 644 | False | 604.000000 | 604 | 83.866000 | 198 | 843 | 1 | chr5D.!!$F1 | 645 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
186 | 187 | 0.102300 | GTGAAAGCAAAACCGTGCCT | 59.898 | 50.000 | 0.00 | 0.0 | 46.14 | 4.75 | F |
187 | 188 | 0.383949 | TGAAAGCAAAACCGTGCCTC | 59.616 | 50.000 | 0.00 | 0.0 | 46.14 | 4.70 | F |
333 | 363 | 0.602905 | CCTTTCCGAAAGAGGCACGT | 60.603 | 55.000 | 20.43 | 0.0 | 41.02 | 4.49 | F |
2046 | 2209 | 1.153046 | CGGGTGTGTGGTCAACCTT | 60.153 | 57.895 | 0.10 | 0.0 | 42.51 | 3.50 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2004 | 2167 | 1.068753 | CTCCATCCTCGCTGCGATT | 59.931 | 57.895 | 26.15 | 10.67 | 34.61 | 3.34 | R |
2077 | 2240 | 2.110213 | GGTCACCACCACGCTCAA | 59.890 | 61.111 | 0.00 | 0.00 | 43.17 | 3.02 | R |
2187 | 2350 | 1.102222 | GGTCCTGCTCGACGAGGTAT | 61.102 | 60.000 | 25.31 | 0.00 | 33.30 | 2.73 | R |
3064 | 3303 | 0.454957 | CTCAAACCAAAGCCATCGCG | 60.455 | 55.000 | 0.00 | 0.00 | 41.18 | 5.87 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
42 | 43 | 3.726291 | AAAAACCAATCTGGGAACACG | 57.274 | 42.857 | 0.00 | 0.00 | 43.37 | 4.49 |
43 | 44 | 1.616159 | AAACCAATCTGGGAACACGG | 58.384 | 50.000 | 0.00 | 0.00 | 43.37 | 4.94 |
44 | 45 | 0.251165 | AACCAATCTGGGAACACGGG | 60.251 | 55.000 | 0.00 | 0.00 | 43.37 | 5.28 |
45 | 46 | 1.378762 | CCAATCTGGGAACACGGGT | 59.621 | 57.895 | 0.00 | 0.00 | 32.67 | 5.28 |
46 | 47 | 0.251165 | CCAATCTGGGAACACGGGTT | 60.251 | 55.000 | 0.56 | 0.56 | 40.76 | 4.11 |
47 | 48 | 1.616159 | CAATCTGGGAACACGGGTTT | 58.384 | 50.000 | 3.63 | 0.00 | 37.36 | 3.27 |
48 | 49 | 1.960689 | CAATCTGGGAACACGGGTTTT | 59.039 | 47.619 | 3.63 | 0.00 | 37.36 | 2.43 |
49 | 50 | 2.364002 | CAATCTGGGAACACGGGTTTTT | 59.636 | 45.455 | 3.63 | 0.00 | 37.36 | 1.94 |
69 | 70 | 4.473477 | TTTTTCCTTTCCGAAAAAGGCA | 57.527 | 36.364 | 19.04 | 9.91 | 43.39 | 4.75 |
70 | 71 | 3.446310 | TTTCCTTTCCGAAAAAGGCAC | 57.554 | 42.857 | 19.04 | 0.00 | 44.92 | 5.01 |
71 | 72 | 2.060050 | TCCTTTCCGAAAAAGGCACA | 57.940 | 45.000 | 19.04 | 5.24 | 44.92 | 4.57 |
72 | 73 | 1.679153 | TCCTTTCCGAAAAAGGCACAC | 59.321 | 47.619 | 19.04 | 0.00 | 44.92 | 3.82 |
73 | 74 | 1.269569 | CCTTTCCGAAAAAGGCACACC | 60.270 | 52.381 | 14.00 | 0.00 | 40.17 | 4.16 |
74 | 75 | 0.747852 | TTTCCGAAAAAGGCACACCC | 59.252 | 50.000 | 0.00 | 0.00 | 36.11 | 4.61 |
75 | 76 | 1.448922 | TTCCGAAAAAGGCACACCCG | 61.449 | 55.000 | 0.00 | 0.00 | 39.21 | 5.28 |
76 | 77 | 2.190841 | CCGAAAAAGGCACACCCGT | 61.191 | 57.895 | 0.00 | 0.00 | 39.21 | 5.28 |
77 | 78 | 1.008995 | CGAAAAAGGCACACCCGTG | 60.009 | 57.895 | 0.00 | 0.00 | 46.56 | 4.94 |
85 | 86 | 2.357517 | CACACCCGTGCCTCTGAC | 60.358 | 66.667 | 0.00 | 0.00 | 36.06 | 3.51 |
86 | 87 | 3.991051 | ACACCCGTGCCTCTGACG | 61.991 | 66.667 | 0.00 | 0.00 | 36.56 | 4.35 |
87 | 88 | 3.680786 | CACCCGTGCCTCTGACGA | 61.681 | 66.667 | 0.00 | 0.00 | 39.21 | 4.20 |
88 | 89 | 2.915659 | ACCCGTGCCTCTGACGAA | 60.916 | 61.111 | 0.00 | 0.00 | 39.21 | 3.85 |
89 | 90 | 2.342279 | CCCGTGCCTCTGACGAAA | 59.658 | 61.111 | 0.00 | 0.00 | 39.21 | 3.46 |
90 | 91 | 1.079127 | CCCGTGCCTCTGACGAAAT | 60.079 | 57.895 | 0.00 | 0.00 | 39.21 | 2.17 |
91 | 92 | 1.084370 | CCCGTGCCTCTGACGAAATC | 61.084 | 60.000 | 0.00 | 0.00 | 39.21 | 2.17 |
92 | 93 | 0.389817 | CCGTGCCTCTGACGAAATCA | 60.390 | 55.000 | 0.00 | 0.00 | 39.21 | 2.57 |
93 | 94 | 0.716108 | CGTGCCTCTGACGAAATCAC | 59.284 | 55.000 | 0.00 | 0.00 | 39.21 | 3.06 |
94 | 95 | 1.795768 | GTGCCTCTGACGAAATCACA | 58.204 | 50.000 | 0.00 | 0.00 | 32.37 | 3.58 |
95 | 96 | 2.143122 | GTGCCTCTGACGAAATCACAA | 58.857 | 47.619 | 0.00 | 0.00 | 32.37 | 3.33 |
96 | 97 | 2.744202 | GTGCCTCTGACGAAATCACAAT | 59.256 | 45.455 | 0.00 | 0.00 | 32.37 | 2.71 |
97 | 98 | 3.002791 | TGCCTCTGACGAAATCACAATC | 58.997 | 45.455 | 0.00 | 0.00 | 32.37 | 2.67 |
98 | 99 | 2.029728 | GCCTCTGACGAAATCACAATCG | 59.970 | 50.000 | 0.00 | 0.00 | 44.33 | 3.34 |
104 | 105 | 2.442189 | CGAAATCACAATCGTGCCTC | 57.558 | 50.000 | 0.00 | 0.00 | 43.28 | 4.70 |
105 | 106 | 2.002586 | CGAAATCACAATCGTGCCTCT | 58.997 | 47.619 | 0.00 | 0.00 | 43.28 | 3.69 |
106 | 107 | 2.029728 | CGAAATCACAATCGTGCCTCTC | 59.970 | 50.000 | 0.00 | 0.00 | 43.28 | 3.20 |
107 | 108 | 1.645034 | AATCACAATCGTGCCTCTCG | 58.355 | 50.000 | 0.00 | 0.00 | 43.28 | 4.04 |
108 | 109 | 0.807667 | ATCACAATCGTGCCTCTCGC | 60.808 | 55.000 | 0.00 | 0.00 | 43.28 | 5.03 |
140 | 141 | 8.766000 | AAACAGAAAACGTGTTTTTATCCTTT | 57.234 | 26.923 | 11.63 | 4.22 | 43.97 | 3.11 |
141 | 142 | 7.980742 | ACAGAAAACGTGTTTTTATCCTTTC | 57.019 | 32.000 | 11.63 | 0.00 | 42.26 | 2.62 |
142 | 143 | 7.768240 | ACAGAAAACGTGTTTTTATCCTTTCT | 58.232 | 30.769 | 11.63 | 0.00 | 42.26 | 2.52 |
143 | 144 | 8.050121 | CAGAAAACGTGTTTTTATCCTTTCTG | 57.950 | 34.615 | 11.63 | 14.17 | 42.26 | 3.02 |
144 | 145 | 7.913297 | CAGAAAACGTGTTTTTATCCTTTCTGA | 59.087 | 33.333 | 19.73 | 0.00 | 45.76 | 3.27 |
145 | 146 | 8.463607 | AGAAAACGTGTTTTTATCCTTTCTGAA | 58.536 | 29.630 | 11.63 | 0.00 | 42.26 | 3.02 |
146 | 147 | 8.989653 | AAAACGTGTTTTTATCCTTTCTGAAA | 57.010 | 26.923 | 4.93 | 2.44 | 39.52 | 2.69 |
147 | 148 | 8.989653 | AAACGTGTTTTTATCCTTTCTGAAAA | 57.010 | 26.923 | 4.18 | 0.00 | 0.00 | 2.29 |
148 | 149 | 8.989653 | AACGTGTTTTTATCCTTTCTGAAAAA | 57.010 | 26.923 | 4.18 | 0.00 | 0.00 | 1.94 |
149 | 150 | 8.628882 | ACGTGTTTTTATCCTTTCTGAAAAAG | 57.371 | 30.769 | 4.18 | 0.00 | 32.90 | 2.27 |
150 | 151 | 8.463607 | ACGTGTTTTTATCCTTTCTGAAAAAGA | 58.536 | 29.630 | 4.18 | 4.85 | 32.90 | 2.52 |
151 | 152 | 8.743099 | CGTGTTTTTATCCTTTCTGAAAAAGAC | 58.257 | 33.333 | 4.18 | 8.21 | 39.64 | 3.01 |
152 | 153 | 9.581099 | GTGTTTTTATCCTTTCTGAAAAAGACA | 57.419 | 29.630 | 4.18 | 4.46 | 41.25 | 3.41 |
153 | 154 | 9.581099 | TGTTTTTATCCTTTCTGAAAAAGACAC | 57.419 | 29.630 | 4.18 | 0.00 | 33.46 | 3.67 |
154 | 155 | 8.743099 | GTTTTTATCCTTTCTGAAAAAGACACG | 58.257 | 33.333 | 4.18 | 0.00 | 33.46 | 4.49 |
155 | 156 | 3.963383 | TCCTTTCTGAAAAAGACACGC | 57.037 | 42.857 | 4.18 | 0.00 | 33.46 | 5.34 |
156 | 157 | 2.616842 | TCCTTTCTGAAAAAGACACGCC | 59.383 | 45.455 | 4.18 | 0.00 | 33.46 | 5.68 |
157 | 158 | 2.287608 | CCTTTCTGAAAAAGACACGCCC | 60.288 | 50.000 | 4.18 | 0.00 | 33.46 | 6.13 |
158 | 159 | 0.941542 | TTCTGAAAAAGACACGCCCG | 59.058 | 50.000 | 0.00 | 0.00 | 33.46 | 6.13 |
159 | 160 | 0.179067 | TCTGAAAAAGACACGCCCGT | 60.179 | 50.000 | 0.00 | 0.00 | 0.00 | 5.28 |
171 | 172 | 4.373116 | GCCCGTGCCTCTCGTGAA | 62.373 | 66.667 | 0.00 | 0.00 | 0.00 | 3.18 |
172 | 173 | 2.342279 | CCCGTGCCTCTCGTGAAA | 59.658 | 61.111 | 0.00 | 0.00 | 0.00 | 2.69 |
173 | 174 | 1.738099 | CCCGTGCCTCTCGTGAAAG | 60.738 | 63.158 | 0.00 | 0.00 | 0.00 | 2.62 |
174 | 175 | 2.383527 | CCGTGCCTCTCGTGAAAGC | 61.384 | 63.158 | 2.99 | 2.99 | 0.00 | 3.51 |
175 | 176 | 1.664649 | CGTGCCTCTCGTGAAAGCA | 60.665 | 57.895 | 7.54 | 7.54 | 31.63 | 3.91 |
176 | 177 | 1.221466 | CGTGCCTCTCGTGAAAGCAA | 61.221 | 55.000 | 11.96 | 0.00 | 34.62 | 3.91 |
177 | 178 | 0.944386 | GTGCCTCTCGTGAAAGCAAA | 59.056 | 50.000 | 11.96 | 0.00 | 34.62 | 3.68 |
178 | 179 | 1.333619 | GTGCCTCTCGTGAAAGCAAAA | 59.666 | 47.619 | 11.96 | 0.00 | 34.62 | 2.44 |
179 | 180 | 1.333619 | TGCCTCTCGTGAAAGCAAAAC | 59.666 | 47.619 | 8.84 | 0.00 | 31.30 | 2.43 |
180 | 181 | 1.335051 | GCCTCTCGTGAAAGCAAAACC | 60.335 | 52.381 | 4.73 | 0.00 | 0.00 | 3.27 |
181 | 182 | 1.069906 | CCTCTCGTGAAAGCAAAACCG | 60.070 | 52.381 | 0.00 | 0.00 | 0.00 | 4.44 |
182 | 183 | 1.597663 | CTCTCGTGAAAGCAAAACCGT | 59.402 | 47.619 | 0.00 | 0.00 | 0.00 | 4.83 |
183 | 184 | 1.329292 | TCTCGTGAAAGCAAAACCGTG | 59.671 | 47.619 | 0.00 | 0.00 | 0.00 | 4.94 |
184 | 185 | 0.248296 | TCGTGAAAGCAAAACCGTGC | 60.248 | 50.000 | 0.00 | 0.00 | 45.28 | 5.34 |
185 | 186 | 1.206115 | CGTGAAAGCAAAACCGTGCC | 61.206 | 55.000 | 0.00 | 0.00 | 46.14 | 5.01 |
186 | 187 | 0.102300 | GTGAAAGCAAAACCGTGCCT | 59.898 | 50.000 | 0.00 | 0.00 | 46.14 | 4.75 |
187 | 188 | 0.383949 | TGAAAGCAAAACCGTGCCTC | 59.616 | 50.000 | 0.00 | 0.00 | 46.14 | 4.70 |
188 | 189 | 0.668535 | GAAAGCAAAACCGTGCCTCT | 59.331 | 50.000 | 0.00 | 0.00 | 46.14 | 3.69 |
189 | 190 | 0.668535 | AAAGCAAAACCGTGCCTCTC | 59.331 | 50.000 | 0.00 | 0.00 | 46.14 | 3.20 |
190 | 191 | 1.507141 | AAGCAAAACCGTGCCTCTCG | 61.507 | 55.000 | 0.00 | 0.00 | 46.14 | 4.04 |
191 | 192 | 2.556287 | CAAAACCGTGCCTCTCGC | 59.444 | 61.111 | 0.00 | 0.00 | 38.31 | 5.03 |
225 | 226 | 2.668185 | TTTCCGAAAGAGGCACGCCA | 62.668 | 55.000 | 11.35 | 0.00 | 38.92 | 5.69 |
333 | 363 | 0.602905 | CCTTTCCGAAAGAGGCACGT | 60.603 | 55.000 | 20.43 | 0.00 | 41.02 | 4.49 |
346 | 376 | 4.039357 | CACGTCCGTGCCTCTCGT | 62.039 | 66.667 | 6.91 | 0.00 | 39.39 | 4.18 |
533 | 600 | 1.597027 | CGTTTCCAAGAGGCACGGT | 60.597 | 57.895 | 0.00 | 0.00 | 37.54 | 4.83 |
766 | 886 | 2.494445 | CCCAGAGCGCGACACATA | 59.506 | 61.111 | 12.10 | 0.00 | 0.00 | 2.29 |
784 | 904 | 2.101770 | GCAAATGGCTGAGAGCGC | 59.898 | 61.111 | 0.00 | 0.00 | 43.62 | 5.92 |
785 | 905 | 2.402388 | CAAATGGCTGAGAGCGCG | 59.598 | 61.111 | 0.00 | 0.00 | 43.62 | 6.86 |
786 | 906 | 3.503363 | AAATGGCTGAGAGCGCGC | 61.503 | 61.111 | 26.66 | 26.66 | 43.62 | 6.86 |
792 | 912 | 3.485431 | CTGAGAGCGCGCCAAGTG | 61.485 | 66.667 | 30.33 | 12.20 | 0.00 | 3.16 |
803 | 923 | 3.197790 | CCAAGTGGCGCTGATCCG | 61.198 | 66.667 | 7.64 | 0.00 | 0.00 | 4.18 |
804 | 924 | 2.434884 | CAAGTGGCGCTGATCCGT | 60.435 | 61.111 | 7.64 | 0.00 | 0.00 | 4.69 |
805 | 925 | 2.434884 | AAGTGGCGCTGATCCGTG | 60.435 | 61.111 | 7.64 | 0.00 | 0.00 | 4.94 |
813 | 933 | 4.473520 | CTGATCCGTGCGGGGCTT | 62.474 | 66.667 | 10.94 | 0.00 | 36.01 | 4.35 |
814 | 934 | 4.467084 | TGATCCGTGCGGGGCTTC | 62.467 | 66.667 | 10.94 | 4.26 | 36.01 | 3.86 |
834 | 954 | 2.311124 | CGAAGGAGGGCTCGTTAATT | 57.689 | 50.000 | 0.00 | 0.00 | 37.75 | 1.40 |
835 | 955 | 3.447918 | CGAAGGAGGGCTCGTTAATTA | 57.552 | 47.619 | 0.00 | 0.00 | 37.75 | 1.40 |
836 | 956 | 3.381949 | CGAAGGAGGGCTCGTTAATTAG | 58.618 | 50.000 | 0.00 | 0.00 | 37.75 | 1.73 |
837 | 957 | 3.181478 | CGAAGGAGGGCTCGTTAATTAGT | 60.181 | 47.826 | 0.00 | 0.00 | 37.75 | 2.24 |
838 | 958 | 4.679905 | CGAAGGAGGGCTCGTTAATTAGTT | 60.680 | 45.833 | 0.00 | 0.00 | 37.75 | 2.24 |
839 | 959 | 4.138487 | AGGAGGGCTCGTTAATTAGTTG | 57.862 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
840 | 960 | 2.612672 | GGAGGGCTCGTTAATTAGTTGC | 59.387 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
841 | 961 | 3.532542 | GAGGGCTCGTTAATTAGTTGCT | 58.467 | 45.455 | 0.00 | 0.00 | 0.00 | 3.91 |
842 | 962 | 3.532542 | AGGGCTCGTTAATTAGTTGCTC | 58.467 | 45.455 | 0.00 | 0.00 | 0.00 | 4.26 |
843 | 963 | 2.612672 | GGGCTCGTTAATTAGTTGCTCC | 59.387 | 50.000 | 0.00 | 0.00 | 0.00 | 4.70 |
1039 | 1190 | 3.052262 | TCCATCTCTCACTCTTCCTCCAT | 60.052 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
1720 | 1877 | 1.451927 | GAGGGCAACATCCGCATCA | 60.452 | 57.895 | 0.00 | 0.00 | 42.94 | 3.07 |
1968 | 2125 | 2.360852 | GGTCTCACGGACGAGGGA | 60.361 | 66.667 | 0.00 | 0.00 | 45.35 | 4.20 |
1983 | 2140 | 3.138653 | ACGAGGGACTGAGGTACTATGAT | 59.861 | 47.826 | 0.00 | 0.00 | 37.80 | 2.45 |
1994 | 2151 | 2.639839 | GGTACTATGATGCCATGAGGGT | 59.360 | 50.000 | 0.00 | 0.00 | 39.65 | 4.34 |
2004 | 2167 | 2.284625 | ATGAGGGTGGAGCACGGA | 60.285 | 61.111 | 0.00 | 0.00 | 34.83 | 4.69 |
2041 | 2204 | 1.743391 | CACTACGGGTGTGTGGTCA | 59.257 | 57.895 | 3.17 | 0.00 | 40.79 | 4.02 |
2046 | 2209 | 1.153046 | CGGGTGTGTGGTCAACCTT | 60.153 | 57.895 | 0.10 | 0.00 | 42.51 | 3.50 |
2090 | 2253 | 4.643387 | GGCCTTGAGCGTGGTGGT | 62.643 | 66.667 | 0.00 | 0.00 | 45.17 | 4.16 |
2268 | 2431 | 1.376683 | CGCTGTCGGGAAATGGGAA | 60.377 | 57.895 | 0.00 | 0.00 | 0.00 | 3.97 |
2310 | 2473 | 0.837272 | TGATGAAATCCCGGGGAGTC | 59.163 | 55.000 | 23.50 | 20.10 | 44.73 | 3.36 |
2378 | 2541 | 1.618343 | TGAGTTTGTCTGCGGAGATCA | 59.382 | 47.619 | 10.72 | 6.49 | 0.00 | 2.92 |
2486 | 2661 | 1.527034 | GCACTGGAATGCAGAAGACA | 58.473 | 50.000 | 9.20 | 0.00 | 45.39 | 3.41 |
2494 | 2714 | 3.332919 | GAATGCAGAAGACAGAAGCTGA | 58.667 | 45.455 | 0.82 | 0.00 | 35.18 | 4.26 |
2505 | 2725 | 1.532437 | CAGAAGCTGATGTTGTTGCGA | 59.468 | 47.619 | 0.00 | 0.00 | 32.44 | 5.10 |
2514 | 2734 | 1.278637 | GTTGTTGCGACTCCCGTTG | 59.721 | 57.895 | 5.50 | 0.00 | 41.15 | 4.10 |
2543 | 2781 | 3.003173 | TCGGGAAGAGGCACCCAG | 61.003 | 66.667 | 0.00 | 0.00 | 45.83 | 4.45 |
2544 | 2782 | 3.322466 | CGGGAAGAGGCACCCAGT | 61.322 | 66.667 | 0.00 | 0.00 | 45.83 | 4.00 |
2586 | 2825 | 5.435291 | ACAGGTGATGAGATGGATCTTTTC | 58.565 | 41.667 | 0.00 | 0.00 | 37.25 | 2.29 |
2612 | 2851 | 6.555812 | TCGACAGATGATAAGTATTAGCGT | 57.444 | 37.500 | 0.00 | 0.00 | 40.47 | 5.07 |
2613 | 2852 | 7.662604 | TCGACAGATGATAAGTATTAGCGTA | 57.337 | 36.000 | 0.00 | 0.00 | 40.47 | 4.42 |
2614 | 2853 | 8.091385 | TCGACAGATGATAAGTATTAGCGTAA | 57.909 | 34.615 | 0.00 | 0.00 | 40.47 | 3.18 |
2615 | 2854 | 8.562052 | TCGACAGATGATAAGTATTAGCGTAAA | 58.438 | 33.333 | 0.00 | 0.00 | 40.47 | 2.01 |
2616 | 2855 | 8.841822 | CGACAGATGATAAGTATTAGCGTAAAG | 58.158 | 37.037 | 0.00 | 0.00 | 40.47 | 1.85 |
2617 | 2856 | 9.130312 | GACAGATGATAAGTATTAGCGTAAAGG | 57.870 | 37.037 | 0.00 | 0.00 | 40.47 | 3.11 |
2618 | 2857 | 8.639761 | ACAGATGATAAGTATTAGCGTAAAGGT | 58.360 | 33.333 | 0.00 | 0.00 | 40.47 | 3.50 |
2619 | 2858 | 8.916654 | CAGATGATAAGTATTAGCGTAAAGGTG | 58.083 | 37.037 | 0.00 | 0.00 | 40.47 | 4.00 |
2622 | 2861 | 8.236585 | TGATAAGTATTAGCGTAAAGGTGGTA | 57.763 | 34.615 | 0.00 | 0.00 | 40.47 | 3.25 |
2660 | 2899 | 1.493950 | GCGATGATGTTGCCCTCGAG | 61.494 | 60.000 | 5.13 | 5.13 | 0.00 | 4.04 |
2667 | 2906 | 1.788229 | TGTTGCCCTCGAGGATATCA | 58.212 | 50.000 | 33.39 | 21.19 | 38.24 | 2.15 |
2673 | 2912 | 2.741228 | GCCCTCGAGGATATCATCATGC | 60.741 | 54.545 | 33.39 | 18.63 | 38.24 | 4.06 |
2679 | 2918 | 3.055602 | CGAGGATATCATCATGCCCTTCA | 60.056 | 47.826 | 16.93 | 0.00 | 0.00 | 3.02 |
2845 | 3084 | 2.571212 | TCGCATTGTTCTTGTCAAGGT | 58.429 | 42.857 | 12.66 | 0.00 | 0.00 | 3.50 |
2891 | 3130 | 2.091610 | CCACCTCACTCCTCTGGATCTA | 60.092 | 54.545 | 0.00 | 0.00 | 0.00 | 1.98 |
2930 | 3169 | 5.086104 | AGGCAATTGACAGTATTAGACGT | 57.914 | 39.130 | 15.18 | 0.00 | 0.00 | 4.34 |
2986 | 3225 | 6.109359 | CCGGTGGGAAATGCAAAATTAATTA | 58.891 | 36.000 | 0.01 | 0.00 | 34.06 | 1.40 |
3064 | 3303 | 2.558554 | TTTGCTACCGCTCTCCGCTC | 62.559 | 60.000 | 0.00 | 0.00 | 36.97 | 5.03 |
3090 | 3329 | 1.616159 | GCTTTGGTTTGAGTGGGCTA | 58.384 | 50.000 | 0.00 | 0.00 | 0.00 | 3.93 |
3148 | 3387 | 4.371786 | TGCACTGACGATGATAGAAATCC | 58.628 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
3370 | 3609 | 5.565592 | TTTGAGCATATTGAGCAATTCGT | 57.434 | 34.783 | 0.52 | 0.00 | 32.50 | 3.85 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
22 | 23 | 2.364002 | CCGTGTTCCCAGATTGGTTTTT | 59.636 | 45.455 | 0.00 | 0.00 | 35.17 | 1.94 |
23 | 24 | 1.960689 | CCGTGTTCCCAGATTGGTTTT | 59.039 | 47.619 | 0.00 | 0.00 | 35.17 | 2.43 |
24 | 25 | 1.616159 | CCGTGTTCCCAGATTGGTTT | 58.384 | 50.000 | 0.00 | 0.00 | 35.17 | 3.27 |
25 | 26 | 0.251165 | CCCGTGTTCCCAGATTGGTT | 60.251 | 55.000 | 0.00 | 0.00 | 35.17 | 3.67 |
26 | 27 | 1.378762 | CCCGTGTTCCCAGATTGGT | 59.621 | 57.895 | 0.00 | 0.00 | 35.17 | 3.67 |
27 | 28 | 0.251165 | AACCCGTGTTCCCAGATTGG | 60.251 | 55.000 | 0.00 | 0.00 | 37.25 | 3.16 |
28 | 29 | 1.616159 | AAACCCGTGTTCCCAGATTG | 58.384 | 50.000 | 0.00 | 0.00 | 32.15 | 2.67 |
29 | 30 | 2.375014 | AAAACCCGTGTTCCCAGATT | 57.625 | 45.000 | 0.00 | 0.00 | 32.15 | 2.40 |
30 | 31 | 2.375014 | AAAAACCCGTGTTCCCAGAT | 57.625 | 45.000 | 0.00 | 0.00 | 32.15 | 2.90 |
31 | 32 | 3.907458 | AAAAACCCGTGTTCCCAGA | 57.093 | 47.368 | 0.00 | 0.00 | 32.15 | 3.86 |
54 | 55 | 1.269569 | GGGTGTGCCTTTTTCGGAAAG | 60.270 | 52.381 | 3.09 | 5.53 | 34.45 | 2.62 |
55 | 56 | 0.747852 | GGGTGTGCCTTTTTCGGAAA | 59.252 | 50.000 | 0.00 | 0.00 | 34.45 | 3.13 |
56 | 57 | 1.448922 | CGGGTGTGCCTTTTTCGGAA | 61.449 | 55.000 | 0.00 | 0.00 | 34.45 | 4.30 |
57 | 58 | 1.894756 | CGGGTGTGCCTTTTTCGGA | 60.895 | 57.895 | 0.00 | 0.00 | 34.45 | 4.55 |
58 | 59 | 2.190841 | ACGGGTGTGCCTTTTTCGG | 61.191 | 57.895 | 0.00 | 0.00 | 34.45 | 4.30 |
59 | 60 | 1.008995 | CACGGGTGTGCCTTTTTCG | 60.009 | 57.895 | 0.00 | 0.00 | 39.67 | 3.46 |
69 | 70 | 3.991051 | CGTCAGAGGCACGGGTGT | 61.991 | 66.667 | 0.25 | 0.00 | 33.46 | 4.16 |
70 | 71 | 2.709125 | TTTCGTCAGAGGCACGGGTG | 62.709 | 60.000 | 0.00 | 0.00 | 37.85 | 4.61 |
71 | 72 | 1.827399 | ATTTCGTCAGAGGCACGGGT | 61.827 | 55.000 | 0.00 | 0.00 | 37.85 | 5.28 |
72 | 73 | 1.079127 | ATTTCGTCAGAGGCACGGG | 60.079 | 57.895 | 0.00 | 0.00 | 37.85 | 5.28 |
73 | 74 | 0.389817 | TGATTTCGTCAGAGGCACGG | 60.390 | 55.000 | 0.00 | 0.00 | 37.85 | 4.94 |
74 | 75 | 0.716108 | GTGATTTCGTCAGAGGCACG | 59.284 | 55.000 | 0.00 | 0.00 | 37.56 | 5.34 |
75 | 76 | 1.795768 | TGTGATTTCGTCAGAGGCAC | 58.204 | 50.000 | 0.00 | 0.00 | 37.56 | 5.01 |
76 | 77 | 2.542020 | TTGTGATTTCGTCAGAGGCA | 57.458 | 45.000 | 0.00 | 0.00 | 37.56 | 4.75 |
77 | 78 | 2.029728 | CGATTGTGATTTCGTCAGAGGC | 59.970 | 50.000 | 0.00 | 0.00 | 37.56 | 4.70 |
78 | 79 | 3.254060 | ACGATTGTGATTTCGTCAGAGG | 58.746 | 45.455 | 0.00 | 0.00 | 44.72 | 3.69 |
115 | 116 | 8.766000 | AAAGGATAAAAACACGTTTTCTGTTT | 57.234 | 26.923 | 8.27 | 0.00 | 42.41 | 2.83 |
116 | 117 | 8.248253 | AGAAAGGATAAAAACACGTTTTCTGTT | 58.752 | 29.630 | 8.27 | 0.00 | 41.45 | 3.16 |
117 | 118 | 7.700656 | CAGAAAGGATAAAAACACGTTTTCTGT | 59.299 | 33.333 | 17.60 | 0.00 | 41.45 | 3.41 |
118 | 119 | 7.913297 | TCAGAAAGGATAAAAACACGTTTTCTG | 59.087 | 33.333 | 18.91 | 18.91 | 41.45 | 3.02 |
119 | 120 | 7.992008 | TCAGAAAGGATAAAAACACGTTTTCT | 58.008 | 30.769 | 8.27 | 0.00 | 41.45 | 2.52 |
120 | 121 | 8.623310 | TTCAGAAAGGATAAAAACACGTTTTC | 57.377 | 30.769 | 8.27 | 0.00 | 41.45 | 2.29 |
121 | 122 | 8.989653 | TTTCAGAAAGGATAAAAACACGTTTT | 57.010 | 26.923 | 2.06 | 2.06 | 43.88 | 2.43 |
122 | 123 | 8.989653 | TTTTCAGAAAGGATAAAAACACGTTT | 57.010 | 26.923 | 0.00 | 0.00 | 0.00 | 3.60 |
123 | 124 | 8.989653 | TTTTTCAGAAAGGATAAAAACACGTT | 57.010 | 26.923 | 0.00 | 0.00 | 0.00 | 3.99 |
124 | 125 | 8.463607 | TCTTTTTCAGAAAGGATAAAAACACGT | 58.536 | 29.630 | 0.00 | 0.00 | 30.15 | 4.49 |
125 | 126 | 8.743099 | GTCTTTTTCAGAAAGGATAAAAACACG | 58.257 | 33.333 | 0.00 | 0.00 | 34.03 | 4.49 |
126 | 127 | 9.581099 | TGTCTTTTTCAGAAAGGATAAAAACAC | 57.419 | 29.630 | 0.00 | 0.00 | 34.03 | 3.32 |
127 | 128 | 9.581099 | GTGTCTTTTTCAGAAAGGATAAAAACA | 57.419 | 29.630 | 0.00 | 0.00 | 34.03 | 2.83 |
128 | 129 | 8.743099 | CGTGTCTTTTTCAGAAAGGATAAAAAC | 58.257 | 33.333 | 0.00 | 0.00 | 34.03 | 2.43 |
129 | 130 | 7.434013 | GCGTGTCTTTTTCAGAAAGGATAAAAA | 59.566 | 33.333 | 0.00 | 0.00 | 34.03 | 1.94 |
130 | 131 | 6.915843 | GCGTGTCTTTTTCAGAAAGGATAAAA | 59.084 | 34.615 | 0.00 | 0.00 | 34.03 | 1.52 |
131 | 132 | 6.435428 | GCGTGTCTTTTTCAGAAAGGATAAA | 58.565 | 36.000 | 0.00 | 0.00 | 34.03 | 1.40 |
132 | 133 | 5.048991 | GGCGTGTCTTTTTCAGAAAGGATAA | 60.049 | 40.000 | 0.00 | 0.00 | 34.03 | 1.75 |
133 | 134 | 4.454504 | GGCGTGTCTTTTTCAGAAAGGATA | 59.545 | 41.667 | 0.00 | 0.00 | 34.03 | 2.59 |
134 | 135 | 3.253432 | GGCGTGTCTTTTTCAGAAAGGAT | 59.747 | 43.478 | 0.00 | 0.00 | 34.03 | 3.24 |
135 | 136 | 2.616842 | GGCGTGTCTTTTTCAGAAAGGA | 59.383 | 45.455 | 0.00 | 0.00 | 31.28 | 3.36 |
136 | 137 | 2.287608 | GGGCGTGTCTTTTTCAGAAAGG | 60.288 | 50.000 | 0.00 | 0.00 | 31.28 | 3.11 |
137 | 138 | 2.602217 | CGGGCGTGTCTTTTTCAGAAAG | 60.602 | 50.000 | 0.00 | 0.00 | 31.28 | 2.62 |
138 | 139 | 1.332375 | CGGGCGTGTCTTTTTCAGAAA | 59.668 | 47.619 | 0.00 | 0.00 | 31.28 | 2.52 |
139 | 140 | 0.941542 | CGGGCGTGTCTTTTTCAGAA | 59.058 | 50.000 | 0.00 | 0.00 | 31.28 | 3.02 |
140 | 141 | 0.179067 | ACGGGCGTGTCTTTTTCAGA | 60.179 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
141 | 142 | 0.041312 | CACGGGCGTGTCTTTTTCAG | 60.041 | 55.000 | 0.00 | 0.00 | 40.91 | 3.02 |
142 | 143 | 2.018544 | CACGGGCGTGTCTTTTTCA | 58.981 | 52.632 | 0.00 | 0.00 | 40.91 | 2.69 |
143 | 144 | 1.370051 | GCACGGGCGTGTCTTTTTC | 60.370 | 57.895 | 0.00 | 0.00 | 46.90 | 2.29 |
144 | 145 | 2.719354 | GCACGGGCGTGTCTTTTT | 59.281 | 55.556 | 0.00 | 0.00 | 46.90 | 1.94 |
145 | 146 | 3.284449 | GGCACGGGCGTGTCTTTT | 61.284 | 61.111 | 2.17 | 0.00 | 46.17 | 2.27 |
154 | 155 | 3.876589 | TTTCACGAGAGGCACGGGC | 62.877 | 63.158 | 0.00 | 0.00 | 40.13 | 6.13 |
155 | 156 | 1.738099 | CTTTCACGAGAGGCACGGG | 60.738 | 63.158 | 0.00 | 0.00 | 35.35 | 5.28 |
156 | 157 | 2.383527 | GCTTTCACGAGAGGCACGG | 61.384 | 63.158 | 0.00 | 0.00 | 34.93 | 4.94 |
157 | 158 | 1.221466 | TTGCTTTCACGAGAGGCACG | 61.221 | 55.000 | 10.78 | 0.00 | 35.28 | 5.34 |
158 | 159 | 0.944386 | TTTGCTTTCACGAGAGGCAC | 59.056 | 50.000 | 10.78 | 0.00 | 35.28 | 5.01 |
159 | 160 | 1.333619 | GTTTTGCTTTCACGAGAGGCA | 59.666 | 47.619 | 8.05 | 8.05 | 34.29 | 4.75 |
160 | 161 | 1.335051 | GGTTTTGCTTTCACGAGAGGC | 60.335 | 52.381 | 0.00 | 0.00 | 0.00 | 4.70 |
161 | 162 | 1.069906 | CGGTTTTGCTTTCACGAGAGG | 60.070 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
162 | 163 | 1.597663 | ACGGTTTTGCTTTCACGAGAG | 59.402 | 47.619 | 0.00 | 0.00 | 0.00 | 3.20 |
163 | 164 | 1.329292 | CACGGTTTTGCTTTCACGAGA | 59.671 | 47.619 | 0.00 | 0.00 | 0.00 | 4.04 |
164 | 165 | 1.741993 | CACGGTTTTGCTTTCACGAG | 58.258 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
165 | 166 | 0.248296 | GCACGGTTTTGCTTTCACGA | 60.248 | 50.000 | 0.00 | 0.00 | 39.59 | 4.35 |
166 | 167 | 1.206115 | GGCACGGTTTTGCTTTCACG | 61.206 | 55.000 | 0.00 | 0.00 | 42.56 | 4.35 |
167 | 168 | 0.102300 | AGGCACGGTTTTGCTTTCAC | 59.898 | 50.000 | 0.00 | 0.00 | 42.56 | 3.18 |
168 | 169 | 0.383949 | GAGGCACGGTTTTGCTTTCA | 59.616 | 50.000 | 0.00 | 0.00 | 42.56 | 2.69 |
169 | 170 | 0.668535 | AGAGGCACGGTTTTGCTTTC | 59.331 | 50.000 | 0.00 | 0.00 | 42.56 | 2.62 |
170 | 171 | 0.668535 | GAGAGGCACGGTTTTGCTTT | 59.331 | 50.000 | 0.00 | 0.00 | 42.56 | 3.51 |
171 | 172 | 1.507141 | CGAGAGGCACGGTTTTGCTT | 61.507 | 55.000 | 0.00 | 0.00 | 42.56 | 3.91 |
172 | 173 | 1.961277 | CGAGAGGCACGGTTTTGCT | 60.961 | 57.895 | 0.00 | 0.00 | 42.56 | 3.91 |
173 | 174 | 2.556287 | CGAGAGGCACGGTTTTGC | 59.444 | 61.111 | 0.00 | 0.00 | 42.18 | 3.68 |
174 | 175 | 2.556287 | GCGAGAGGCACGGTTTTG | 59.444 | 61.111 | 0.00 | 0.00 | 42.87 | 2.44 |
175 | 176 | 3.041940 | CGCGAGAGGCACGGTTTT | 61.042 | 61.111 | 0.00 | 0.00 | 43.84 | 2.43 |
176 | 177 | 3.986006 | TCGCGAGAGGCACGGTTT | 61.986 | 61.111 | 3.71 | 0.00 | 43.84 | 3.27 |
225 | 226 | 1.748403 | TGCTTTCGTGAGAGGCACT | 59.252 | 52.632 | 0.00 | 0.00 | 45.49 | 4.40 |
257 | 258 | 3.022287 | CACGGTTGTGCTTTCGCT | 58.978 | 55.556 | 0.00 | 0.00 | 39.67 | 4.93 |
333 | 363 | 1.289066 | CTTTCACGAGAGGCACGGA | 59.711 | 57.895 | 0.00 | 0.00 | 34.93 | 4.69 |
459 | 498 | 1.452145 | GAGGCACGGTTTTGCTTCCA | 61.452 | 55.000 | 0.00 | 0.00 | 41.54 | 3.53 |
533 | 600 | 2.126463 | CTTTCGCGAGAGGCACGA | 60.126 | 61.111 | 18.35 | 0.00 | 43.84 | 4.35 |
561 | 628 | 1.259507 | CGGTTTTGTTTTCGCGAGAGA | 59.740 | 47.619 | 9.59 | 0.00 | 43.69 | 3.10 |
654 | 743 | 2.845363 | GGTTTTCTACCGGTCTTCCA | 57.155 | 50.000 | 12.40 | 0.00 | 37.12 | 3.53 |
702 | 806 | 2.530700 | CGCGTTTTCGGCTTTTTAAACA | 59.469 | 40.909 | 0.00 | 0.00 | 44.29 | 2.83 |
786 | 906 | 3.197790 | CGGATCAGCGCCACTTGG | 61.198 | 66.667 | 2.29 | 0.00 | 38.53 | 3.61 |
787 | 907 | 2.434884 | ACGGATCAGCGCCACTTG | 60.435 | 61.111 | 2.29 | 0.00 | 0.00 | 3.16 |
788 | 908 | 2.434884 | CACGGATCAGCGCCACTT | 60.435 | 61.111 | 2.29 | 0.00 | 0.00 | 3.16 |
796 | 916 | 4.473520 | AAGCCCCGCACGGATCAG | 62.474 | 66.667 | 11.42 | 0.00 | 37.50 | 2.90 |
797 | 917 | 4.467084 | GAAGCCCCGCACGGATCA | 62.467 | 66.667 | 11.42 | 0.00 | 37.50 | 2.92 |
807 | 927 | 3.798511 | CCCTCCTTCGGAAGCCCC | 61.799 | 72.222 | 12.29 | 0.00 | 0.00 | 5.80 |
808 | 928 | 4.491409 | GCCCTCCTTCGGAAGCCC | 62.491 | 72.222 | 12.29 | 0.00 | 0.00 | 5.19 |
809 | 929 | 3.393149 | GAGCCCTCCTTCGGAAGCC | 62.393 | 68.421 | 12.29 | 0.00 | 33.20 | 4.35 |
810 | 930 | 2.188207 | GAGCCCTCCTTCGGAAGC | 59.812 | 66.667 | 12.29 | 1.57 | 33.01 | 3.86 |
811 | 931 | 1.889530 | AACGAGCCCTCCTTCGGAAG | 61.890 | 60.000 | 10.82 | 10.82 | 0.00 | 3.46 |
812 | 932 | 0.612732 | TAACGAGCCCTCCTTCGGAA | 60.613 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
813 | 933 | 0.612732 | TTAACGAGCCCTCCTTCGGA | 60.613 | 55.000 | 0.00 | 0.00 | 0.00 | 4.55 |
814 | 934 | 0.464452 | ATTAACGAGCCCTCCTTCGG | 59.536 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
815 | 935 | 2.311124 | AATTAACGAGCCCTCCTTCG | 57.689 | 50.000 | 0.00 | 0.00 | 0.00 | 3.79 |
816 | 936 | 4.403585 | ACTAATTAACGAGCCCTCCTTC | 57.596 | 45.455 | 0.00 | 0.00 | 0.00 | 3.46 |
817 | 937 | 4.514401 | CAACTAATTAACGAGCCCTCCTT | 58.486 | 43.478 | 0.00 | 0.00 | 0.00 | 3.36 |
818 | 938 | 3.681874 | GCAACTAATTAACGAGCCCTCCT | 60.682 | 47.826 | 0.00 | 0.00 | 0.00 | 3.69 |
819 | 939 | 2.612672 | GCAACTAATTAACGAGCCCTCC | 59.387 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
820 | 940 | 3.532542 | AGCAACTAATTAACGAGCCCTC | 58.467 | 45.455 | 0.00 | 0.00 | 0.00 | 4.30 |
821 | 941 | 3.532542 | GAGCAACTAATTAACGAGCCCT | 58.467 | 45.455 | 0.00 | 0.00 | 0.00 | 5.19 |
822 | 942 | 2.612672 | GGAGCAACTAATTAACGAGCCC | 59.387 | 50.000 | 0.00 | 0.00 | 0.00 | 5.19 |
823 | 943 | 2.612672 | GGGAGCAACTAATTAACGAGCC | 59.387 | 50.000 | 0.00 | 0.00 | 0.00 | 4.70 |
824 | 944 | 3.532542 | AGGGAGCAACTAATTAACGAGC | 58.467 | 45.455 | 0.00 | 0.00 | 0.00 | 5.03 |
825 | 945 | 5.420409 | AGAAGGGAGCAACTAATTAACGAG | 58.580 | 41.667 | 0.00 | 0.00 | 0.00 | 4.18 |
826 | 946 | 5.416271 | AGAAGGGAGCAACTAATTAACGA | 57.584 | 39.130 | 0.00 | 0.00 | 0.00 | 3.85 |
827 | 947 | 7.605410 | TTTAGAAGGGAGCAACTAATTAACG | 57.395 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
828 | 948 | 8.242053 | GGTTTTAGAAGGGAGCAACTAATTAAC | 58.758 | 37.037 | 0.00 | 0.00 | 0.00 | 2.01 |
829 | 949 | 7.395206 | GGGTTTTAGAAGGGAGCAACTAATTAA | 59.605 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
830 | 950 | 6.888088 | GGGTTTTAGAAGGGAGCAACTAATTA | 59.112 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
831 | 951 | 5.715279 | GGGTTTTAGAAGGGAGCAACTAATT | 59.285 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
832 | 952 | 5.015284 | AGGGTTTTAGAAGGGAGCAACTAAT | 59.985 | 40.000 | 0.00 | 0.00 | 0.00 | 1.73 |
833 | 953 | 4.352893 | AGGGTTTTAGAAGGGAGCAACTAA | 59.647 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
834 | 954 | 3.914435 | AGGGTTTTAGAAGGGAGCAACTA | 59.086 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
835 | 955 | 2.716969 | AGGGTTTTAGAAGGGAGCAACT | 59.283 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
836 | 956 | 3.082548 | GAGGGTTTTAGAAGGGAGCAAC | 58.917 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
837 | 957 | 2.986728 | AGAGGGTTTTAGAAGGGAGCAA | 59.013 | 45.455 | 0.00 | 0.00 | 0.00 | 3.91 |
838 | 958 | 2.632537 | AGAGGGTTTTAGAAGGGAGCA | 58.367 | 47.619 | 0.00 | 0.00 | 0.00 | 4.26 |
839 | 959 | 3.722908 | AAGAGGGTTTTAGAAGGGAGC | 57.277 | 47.619 | 0.00 | 0.00 | 0.00 | 4.70 |
1720 | 1877 | 2.224523 | ACATGTCCATCAACGAGTTGGT | 60.225 | 45.455 | 14.99 | 6.02 | 40.78 | 3.67 |
1968 | 2125 | 4.226384 | TCATGGCATCATAGTACCTCAGT | 58.774 | 43.478 | 0.00 | 0.00 | 31.33 | 3.41 |
1983 | 2140 | 2.934932 | TGCTCCACCCTCATGGCA | 60.935 | 61.111 | 0.00 | 0.00 | 39.85 | 4.92 |
1994 | 2151 | 2.125552 | CTGCGATTCCGTGCTCCA | 60.126 | 61.111 | 0.00 | 0.00 | 38.24 | 3.86 |
2004 | 2167 | 1.068753 | CTCCATCCTCGCTGCGATT | 59.931 | 57.895 | 26.15 | 10.67 | 34.61 | 3.34 |
2070 | 2233 | 4.021925 | ACCACGCTCAAGGCCTCC | 62.022 | 66.667 | 5.23 | 0.00 | 37.74 | 4.30 |
2077 | 2240 | 2.110213 | GGTCACCACCACGCTCAA | 59.890 | 61.111 | 0.00 | 0.00 | 43.17 | 3.02 |
2157 | 2320 | 2.994995 | TCGGCCATGTCCACGTCT | 60.995 | 61.111 | 2.24 | 0.00 | 0.00 | 4.18 |
2187 | 2350 | 1.102222 | GGTCCTGCTCGACGAGGTAT | 61.102 | 60.000 | 25.31 | 0.00 | 33.30 | 2.73 |
2378 | 2541 | 2.898738 | CAGCCTGCGGATGAGACT | 59.101 | 61.111 | 6.97 | 0.00 | 42.34 | 3.24 |
2486 | 2661 | 1.532868 | GTCGCAACAACATCAGCTTCT | 59.467 | 47.619 | 0.00 | 0.00 | 0.00 | 2.85 |
2494 | 2714 | 0.534203 | AACGGGAGTCGCAACAACAT | 60.534 | 50.000 | 8.06 | 0.00 | 46.69 | 2.71 |
2514 | 2734 | 1.476891 | TCTTCCCGAGACTGTACATGC | 59.523 | 52.381 | 0.00 | 0.00 | 0.00 | 4.06 |
2543 | 2781 | 9.894783 | CACCTGTATCTGTATTACTGTACATAC | 57.105 | 37.037 | 0.00 | 0.00 | 34.33 | 2.39 |
2544 | 2782 | 9.856162 | TCACCTGTATCTGTATTACTGTACATA | 57.144 | 33.333 | 0.00 | 0.00 | 34.33 | 2.29 |
2586 | 2825 | 6.470556 | CGCTAATACTTATCATCTGTCGATGG | 59.529 | 42.308 | 0.00 | 0.00 | 45.66 | 3.51 |
2588 | 2827 | 7.147143 | ACGCTAATACTTATCATCTGTCGAT | 57.853 | 36.000 | 0.00 | 0.00 | 0.00 | 3.59 |
2589 | 2828 | 6.555812 | ACGCTAATACTTATCATCTGTCGA | 57.444 | 37.500 | 0.00 | 0.00 | 0.00 | 4.20 |
2590 | 2829 | 8.723777 | TTTACGCTAATACTTATCATCTGTCG | 57.276 | 34.615 | 0.00 | 0.00 | 0.00 | 4.35 |
2591 | 2830 | 9.130312 | CCTTTACGCTAATACTTATCATCTGTC | 57.870 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
2592 | 2831 | 8.639761 | ACCTTTACGCTAATACTTATCATCTGT | 58.360 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
2593 | 2832 | 8.916654 | CACCTTTACGCTAATACTTATCATCTG | 58.083 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
2594 | 2833 | 8.088981 | CCACCTTTACGCTAATACTTATCATCT | 58.911 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
2595 | 2834 | 7.871463 | ACCACCTTTACGCTAATACTTATCATC | 59.129 | 37.037 | 0.00 | 0.00 | 0.00 | 2.92 |
2596 | 2835 | 7.732996 | ACCACCTTTACGCTAATACTTATCAT | 58.267 | 34.615 | 0.00 | 0.00 | 0.00 | 2.45 |
2597 | 2836 | 7.116075 | ACCACCTTTACGCTAATACTTATCA | 57.884 | 36.000 | 0.00 | 0.00 | 0.00 | 2.15 |
2598 | 2837 | 9.702494 | ATTACCACCTTTACGCTAATACTTATC | 57.298 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
2599 | 2838 | 9.485206 | CATTACCACCTTTACGCTAATACTTAT | 57.515 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
2600 | 2839 | 8.477256 | ACATTACCACCTTTACGCTAATACTTA | 58.523 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
2601 | 2840 | 7.279313 | CACATTACCACCTTTACGCTAATACTT | 59.721 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
2602 | 2841 | 6.759827 | CACATTACCACCTTTACGCTAATACT | 59.240 | 38.462 | 0.00 | 0.00 | 0.00 | 2.12 |
2603 | 2842 | 6.018507 | CCACATTACCACCTTTACGCTAATAC | 60.019 | 42.308 | 0.00 | 0.00 | 0.00 | 1.89 |
2604 | 2843 | 6.050432 | CCACATTACCACCTTTACGCTAATA | 58.950 | 40.000 | 0.00 | 0.00 | 0.00 | 0.98 |
2605 | 2844 | 4.879545 | CCACATTACCACCTTTACGCTAAT | 59.120 | 41.667 | 0.00 | 0.00 | 0.00 | 1.73 |
2606 | 2845 | 4.255301 | CCACATTACCACCTTTACGCTAA | 58.745 | 43.478 | 0.00 | 0.00 | 0.00 | 3.09 |
2607 | 2846 | 3.864243 | CCACATTACCACCTTTACGCTA | 58.136 | 45.455 | 0.00 | 0.00 | 0.00 | 4.26 |
2608 | 2847 | 2.706890 | CCACATTACCACCTTTACGCT | 58.293 | 47.619 | 0.00 | 0.00 | 0.00 | 5.07 |
2609 | 2848 | 1.131693 | GCCACATTACCACCTTTACGC | 59.868 | 52.381 | 0.00 | 0.00 | 0.00 | 4.42 |
2610 | 2849 | 2.160813 | GTGCCACATTACCACCTTTACG | 59.839 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2611 | 2850 | 2.490509 | GGTGCCACATTACCACCTTTAC | 59.509 | 50.000 | 0.00 | 0.00 | 44.32 | 2.01 |
2612 | 2851 | 2.555670 | GGGTGCCACATTACCACCTTTA | 60.556 | 50.000 | 8.71 | 0.00 | 46.35 | 1.85 |
2613 | 2852 | 1.627864 | GGTGCCACATTACCACCTTT | 58.372 | 50.000 | 0.00 | 0.00 | 44.32 | 3.11 |
2614 | 2853 | 0.251608 | GGGTGCCACATTACCACCTT | 60.252 | 55.000 | 8.71 | 0.00 | 46.35 | 3.50 |
2615 | 2854 | 1.382629 | GGGTGCCACATTACCACCT | 59.617 | 57.895 | 8.71 | 0.00 | 46.35 | 4.00 |
2616 | 2855 | 0.324275 | ATGGGTGCCACATTACCACC | 60.324 | 55.000 | 0.00 | 0.54 | 46.40 | 4.61 |
2617 | 2856 | 1.476488 | GAATGGGTGCCACATTACCAC | 59.524 | 52.381 | 0.00 | 0.00 | 38.57 | 4.16 |
2618 | 2857 | 1.846007 | GAATGGGTGCCACATTACCA | 58.154 | 50.000 | 0.00 | 0.00 | 38.57 | 3.25 |
2619 | 2858 | 0.738389 | CGAATGGGTGCCACATTACC | 59.262 | 55.000 | 0.00 | 0.00 | 38.57 | 2.85 |
2622 | 2861 | 1.304381 | AGCGAATGGGTGCCACATT | 60.304 | 52.632 | 0.00 | 2.72 | 40.98 | 2.71 |
2660 | 2899 | 4.008330 | CAGTGAAGGGCATGATGATATCC | 58.992 | 47.826 | 0.00 | 0.00 | 0.00 | 2.59 |
2667 | 2906 | 1.693034 | TGGCAGTGAAGGGCATGAT | 59.307 | 52.632 | 0.00 | 0.00 | 35.74 | 2.45 |
2673 | 2912 | 0.890683 | GTTTGGATGGCAGTGAAGGG | 59.109 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
2679 | 2918 | 2.290960 | GGAAGGTAGTTTGGATGGCAGT | 60.291 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2845 | 3084 | 4.716784 | AGATTGTTATAGCAGTGAGGACCA | 59.283 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
2891 | 3130 | 0.898320 | CCTTGATGACCTCGACTGGT | 59.102 | 55.000 | 0.00 | 0.00 | 44.10 | 4.00 |
2930 | 3169 | 0.550914 | ATCCCGCCCAAAGATAAGCA | 59.449 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
2966 | 3205 | 8.257306 | GTCTCCTAATTAATTTTGCATTTCCCA | 58.743 | 33.333 | 5.91 | 0.00 | 0.00 | 4.37 |
2986 | 3225 | 2.031163 | GCTTGCACACCGTCTCCT | 59.969 | 61.111 | 0.00 | 0.00 | 0.00 | 3.69 |
3064 | 3303 | 0.454957 | CTCAAACCAAAGCCATCGCG | 60.455 | 55.000 | 0.00 | 0.00 | 41.18 | 5.87 |
3090 | 3329 | 3.506398 | CAATCCAAGGTTTAGTGGGGTT | 58.494 | 45.455 | 0.00 | 0.00 | 35.46 | 4.11 |
3148 | 3387 | 2.256461 | GAGTGGCAGCCGCAAAAG | 59.744 | 61.111 | 27.03 | 0.00 | 41.24 | 2.27 |
3186 | 3425 | 0.619255 | TCCCAGAAAGTGGCCCGATA | 60.619 | 55.000 | 0.00 | 0.00 | 46.45 | 2.92 |
3370 | 3609 | 0.693049 | GAGCTTCTCCCAAAGGGTGA | 59.307 | 55.000 | 1.36 | 2.16 | 44.74 | 4.02 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.