Multiple sequence alignment - TraesCS6B01G358400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G358400 chr6B 100.000 4370 0 0 1 4370 626592105 626587736 0.000000e+00 8070.0
1 TraesCS6B01G358400 chr6B 91.882 1626 115 8 1348 2968 626882341 626883954 0.000000e+00 2255.0
2 TraesCS6B01G358400 chr6B 90.839 1561 112 14 1485 3027 626811889 626813436 0.000000e+00 2061.0
3 TraesCS6B01G358400 chr6B 90.746 1502 124 6 1470 2968 626458132 626456643 0.000000e+00 1989.0
4 TraesCS6B01G358400 chr6B 88.624 923 84 13 7 911 626810786 626811705 0.000000e+00 1103.0
5 TraesCS6B01G358400 chr6B 90.146 822 61 11 98 905 626880455 626881270 0.000000e+00 1051.0
6 TraesCS6B01G358400 chr6B 95.400 413 17 1 914 1326 366587835 366587425 0.000000e+00 656.0
7 TraesCS6B01G358400 chr6B 88.610 439 39 5 3939 4370 626455880 626455446 1.390000e-144 523.0
8 TraesCS6B01G358400 chr6B 89.783 323 24 7 4054 4370 626886051 626886370 5.260000e-109 405.0
9 TraesCS6B01G358400 chr6B 84.488 303 28 6 3733 4016 626885589 626885891 9.250000e-72 281.0
10 TraesCS6B01G358400 chr6B 95.349 172 7 1 1327 1498 626811700 626811870 5.570000e-69 272.0
11 TraesCS6B01G358400 chr6B 88.571 210 20 2 3648 3854 626813652 626813860 7.260000e-63 252.0
12 TraesCS6B01G358400 chr6B 86.463 229 14 2 3583 3811 626456193 626455982 7.310000e-58 235.0
13 TraesCS6B01G358400 chr6B 95.714 140 6 0 3146 3285 626456333 626456194 4.400000e-55 226.0
14 TraesCS6B01G358400 chr6B 82.778 180 23 7 3649 3825 630836576 630836750 2.100000e-33 154.0
15 TraesCS6B01G358400 chr6B 100.000 30 0 0 3825 3854 626455982 626455953 6.110000e-04 56.5
16 TraesCS6B01G358400 chr6D 91.398 1581 121 8 1480 3057 417695275 417693707 0.000000e+00 2152.0
17 TraesCS6B01G358400 chr6D 90.779 1605 118 12 1471 3057 417890729 417892321 0.000000e+00 2117.0
18 TraesCS6B01G358400 chr6D 93.142 802 32 11 3583 4370 417893686 417894478 0.000000e+00 1155.0
19 TraesCS6B01G358400 chr6D 85.031 815 42 32 3583 4370 417693323 417692562 0.000000e+00 756.0
20 TraesCS6B01G358400 chr6D 94.245 139 5 1 3147 3285 417693459 417693324 4.430000e-50 209.0
21 TraesCS6B01G358400 chr6D 96.512 86 2 1 3054 3138 417892443 417892528 1.640000e-29 141.0
22 TraesCS6B01G358400 chr6D 93.617 94 5 1 3193 3285 417893592 417893685 5.890000e-29 139.0
23 TraesCS6B01G358400 chr6D 95.349 43 2 0 3077 3119 417693654 417693612 7.840000e-08 69.4
24 TraesCS6B01G358400 chr6A 92.060 1524 105 8 1449 2968 560567626 560569137 0.000000e+00 2130.0
25 TraesCS6B01G358400 chr6A 91.182 1066 87 4 1993 3057 560104775 560103716 0.000000e+00 1441.0
26 TraesCS6B01G358400 chr6A 95.210 689 25 2 3688 4370 560569648 560570334 0.000000e+00 1083.0
27 TraesCS6B01G358400 chr6A 83.144 617 61 20 309 908 560562658 560563248 1.390000e-144 523.0
28 TraesCS6B01G358400 chr6A 92.283 311 7 7 3286 3583 18296768 18297074 4.040000e-115 425.0
29 TraesCS6B01G358400 chr6A 82.175 561 30 24 3583 4115 560102932 560102414 6.760000e-113 418.0
30 TraesCS6B01G358400 chr6A 89.342 319 16 7 3281 3586 613702795 613703108 6.860000e-103 385.0
31 TraesCS6B01G358400 chr6A 94.245 139 8 0 3147 3285 560103071 560102933 3.420000e-51 213.0
32 TraesCS6B01G358400 chr6A 83.333 204 20 5 123 313 560546111 560546313 4.490000e-40 176.0
33 TraesCS6B01G358400 chr6A 82.162 185 22 10 3649 3825 562137766 562137947 9.790000e-32 148.0
34 TraesCS6B01G358400 chr6A 82.812 128 20 2 3680 3806 562143268 562143394 3.570000e-21 113.0
35 TraesCS6B01G358400 chr6A 93.548 62 4 0 3583 3644 560569588 560569649 4.650000e-15 93.5
36 TraesCS6B01G358400 chr2B 93.939 429 20 6 908 1334 756160084 756160508 1.020000e-180 643.0
37 TraesCS6B01G358400 chr2B 91.901 284 11 4 3291 3563 55985952 55985670 1.910000e-103 387.0
38 TraesCS6B01G358400 chr1B 94.712 416 19 3 914 1327 679746805 679746391 1.020000e-180 643.0
39 TraesCS6B01G358400 chr1B 93.473 429 24 3 906 1334 432438760 432438336 6.170000e-178 634.0
40 TraesCS6B01G358400 chr1B 92.971 313 4 5 3286 3585 172251056 172251363 1.440000e-119 440.0
41 TraesCS6B01G358400 chr1B 90.064 312 10 5 3286 3584 433068016 433068319 6.860000e-103 385.0
42 TraesCS6B01G358400 chr7B 93.911 427 21 5 907 1332 605818533 605818955 1.330000e-179 640.0
43 TraesCS6B01G358400 chr5B 94.686 414 18 4 914 1326 654492058 654492468 1.330000e-179 640.0
44 TraesCS6B01G358400 chr5B 94.417 412 18 5 915 1326 44022283 44021877 2.870000e-176 628.0
45 TraesCS6B01G358400 chr4A 94.048 420 20 5 910 1327 711633502 711633918 2.220000e-177 632.0
46 TraesCS6B01G358400 chr4A 94.212 311 1 4 3286 3583 11587123 11586817 3.980000e-125 459.0
47 TraesCS6B01G358400 chr3B 93.176 425 25 4 903 1326 12632987 12633408 4.800000e-174 621.0
48 TraesCS6B01G358400 chr3B 94.382 89 5 0 138 226 199556889 199556801 2.120000e-28 137.0
49 TraesCS6B01G358400 chr3B 94.382 89 5 0 138 226 199560874 199560786 2.120000e-28 137.0
50 TraesCS6B01G358400 chr3B 94.382 89 5 0 138 226 199612569 199612481 2.120000e-28 137.0
51 TraesCS6B01G358400 chr5A 92.926 311 5 4 3286 3583 377363025 377362719 1.870000e-118 436.0
52 TraesCS6B01G358400 chr5A 92.437 238 5 2 3290 3514 485932270 485932507 1.170000e-85 327.0
53 TraesCS6B01G358400 chr2D 90.164 305 12 5 3294 3585 66556758 66556459 8.870000e-102 381.0
54 TraesCS6B01G358400 chr3D 90.722 291 13 3 3286 3563 588111779 588112068 4.130000e-100 375.0
55 TraesCS6B01G358400 chr3D 92.857 84 6 0 140 223 612083409 612083326 5.940000e-24 122.0
56 TraesCS6B01G358400 chr3D 91.667 84 7 0 140 223 612061937 612061854 2.760000e-22 117.0
57 TraesCS6B01G358400 chr1A 91.358 81 7 0 138 218 544909764 544909684 1.280000e-20 111.0
58 TraesCS6B01G358400 chr1A 91.358 81 7 0 138 218 563662070 563662150 1.280000e-20 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G358400 chr6B 626587736 626592105 4369 True 8070.000000 8070 100.000000 1 4370 1 chr6B.!!$R2 4369
1 TraesCS6B01G358400 chr6B 626880455 626886370 5915 False 998.000000 2255 89.074750 98 4370 4 chr6B.!!$F3 4272
2 TraesCS6B01G358400 chr6B 626810786 626813860 3074 False 922.000000 2061 90.845750 7 3854 4 chr6B.!!$F2 3847
3 TraesCS6B01G358400 chr6B 626455446 626458132 2686 True 605.900000 1989 92.306600 1470 4370 5 chr6B.!!$R3 2900
4 TraesCS6B01G358400 chr6D 417890729 417894478 3749 False 888.000000 2117 93.512500 1471 4370 4 chr6D.!!$F1 2899
5 TraesCS6B01G358400 chr6D 417692562 417695275 2713 True 796.600000 2152 91.505750 1480 4370 4 chr6D.!!$R1 2890
6 TraesCS6B01G358400 chr6A 560567626 560570334 2708 False 1102.166667 2130 93.606000 1449 4370 3 chr6A.!!$F7 2921
7 TraesCS6B01G358400 chr6A 560102414 560104775 2361 True 690.666667 1441 89.200667 1993 4115 3 chr6A.!!$R1 2122
8 TraesCS6B01G358400 chr6A 560562658 560563248 590 False 523.000000 523 83.144000 309 908 1 chr6A.!!$F3 599

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
956 986 0.108186 CTCATCTGCACCCACGCTTA 60.108 55.0 0.00 0.00 0.00 3.09 F
1203 1638 0.033366 AGTTGAATTTTGGGGCGCAC 59.967 50.0 10.83 4.83 0.00 5.34 F
1924 2616 0.245813 GTCAGGTCCGTGGTTACCTC 59.754 60.0 2.07 0.00 44.43 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2507 3200 0.110056 CTTGCTGTGATGCCGTGTTC 60.110 55.0 0.00 0.0 0.0 3.18 R
2863 3556 0.587768 CGCAGACAAACTCATGCACA 59.412 50.0 0.00 0.0 38.6 4.57 R
3428 5852 0.032416 TAGTGGGGCCTAGTGTCTCC 60.032 60.0 7.61 0.0 0.0 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 7.334421 GCCTCTTCATTAAATCGCTAATATGGA 59.666 37.037 0.00 0.00 0.00 3.41
38 39 2.789409 ATCGCTAATATGGAAGGCCC 57.211 50.000 0.00 0.00 0.00 5.80
57 58 2.992164 GGCATGGCCCAGCATTTT 59.008 55.556 17.11 0.00 44.06 1.82
62 63 1.619807 ATGGCCCAGCATTTTGGCTC 61.620 55.000 0.00 0.00 43.68 4.70
79 80 2.456577 GCTCAAAATTTAGGCCCAGGA 58.543 47.619 0.00 0.00 0.00 3.86
82 83 1.476488 CAAAATTTAGGCCCAGGACCG 59.524 52.381 0.00 0.00 0.00 4.79
128 129 2.045926 GTCGGGCTGTTCATGGCT 60.046 61.111 0.00 0.00 0.00 4.75
137 138 3.325135 GGCTGTTCATGGCTAGGTATACT 59.675 47.826 2.25 0.00 0.00 2.12
156 157 3.922375 ACTGGAGAAGATTAGGGAGGAG 58.078 50.000 0.00 0.00 0.00 3.69
177 178 0.681243 GGTCCCACCAGCTGAAATCC 60.681 60.000 17.39 6.10 38.42 3.01
230 244 6.239204 CGTAGAACCATTCCATATGTGTAGGA 60.239 42.308 1.24 0.00 0.00 2.94
235 249 7.823745 ACCATTCCATATGTGTAGGATTTTC 57.176 36.000 1.24 0.00 0.00 2.29
240 254 5.129650 TCCATATGTGTAGGATTTTCGGTCA 59.870 40.000 1.24 0.00 0.00 4.02
246 260 1.745489 GGATTTTCGGTCAGCGCCT 60.745 57.895 2.29 0.00 0.00 5.52
253 267 3.044305 GGTCAGCGCCTGTGTGTC 61.044 66.667 2.29 0.00 32.61 3.67
266 280 3.000322 CCTGTGTGTCGATCGAAATAAGC 60.000 47.826 21.31 6.80 0.00 3.09
274 288 2.032894 CGATCGAAATAAGCGGTTGCAT 60.033 45.455 10.26 0.00 46.23 3.96
278 292 3.002246 TCGAAATAAGCGGTTGCATCATC 59.998 43.478 10.73 0.00 46.23 2.92
350 364 1.879575 CTAGACAGGTGGGGATCCAA 58.120 55.000 15.23 0.00 46.04 3.53
362 376 1.148310 GGATCCAATATGGCGTGACG 58.852 55.000 6.95 0.00 37.47 4.35
406 420 0.950555 GGTTGCGACAGAGATGCACA 60.951 55.000 6.39 0.00 38.55 4.57
441 455 3.192944 AGATGATGGTTGGGGAGAGAAA 58.807 45.455 0.00 0.00 0.00 2.52
600 616 3.924114 TCTTATTTTCCCGATGCTCCA 57.076 42.857 0.00 0.00 0.00 3.86
601 617 3.541632 TCTTATTTTCCCGATGCTCCAC 58.458 45.455 0.00 0.00 0.00 4.02
616 632 2.552743 GCTCCACACTGGTTTAAGGTTC 59.447 50.000 0.00 0.00 39.03 3.62
618 634 3.547746 TCCACACTGGTTTAAGGTTCAC 58.452 45.455 0.00 0.00 39.03 3.18
689 719 4.081309 AGGATAAGGTTCGATTCCGACAAA 60.081 41.667 0.00 0.00 45.50 2.83
692 722 0.441145 GGTTCGATTCCGACAAACCG 59.559 55.000 0.00 0.00 45.50 4.44
702 732 3.927854 TCCGACAAACCGTATGAATTGA 58.072 40.909 6.66 0.00 0.00 2.57
732 762 6.721889 TTCTTTTGAATGGACTGGCTCACAG 61.722 44.000 0.00 0.00 42.36 3.66
927 957 3.906720 TTTTAGGAGTGCGGCTAATCT 57.093 42.857 0.00 0.00 0.00 2.40
935 965 2.320587 GCGGCTAATCTGCATCCGG 61.321 63.158 0.00 0.00 46.35 5.14
937 967 1.968540 GGCTAATCTGCATCCGGGC 60.969 63.158 0.00 0.00 34.04 6.13
938 968 1.072159 GCTAATCTGCATCCGGGCT 59.928 57.895 0.00 0.00 34.04 5.19
940 970 0.394192 CTAATCTGCATCCGGGCTCA 59.606 55.000 0.00 0.00 34.04 4.26
941 971 1.002888 CTAATCTGCATCCGGGCTCAT 59.997 52.381 0.00 0.00 34.04 2.90
942 972 0.250640 AATCTGCATCCGGGCTCATC 60.251 55.000 0.00 0.00 34.04 2.92
944 974 1.597302 CTGCATCCGGGCTCATCTG 60.597 63.158 0.00 0.00 34.04 2.90
945 975 2.976903 GCATCCGGGCTCATCTGC 60.977 66.667 0.00 0.00 0.00 4.26
946 976 2.507452 CATCCGGGCTCATCTGCA 59.493 61.111 0.00 0.00 34.04 4.41
947 977 1.890979 CATCCGGGCTCATCTGCAC 60.891 63.158 0.00 0.00 34.04 4.57
948 978 3.112205 ATCCGGGCTCATCTGCACC 62.112 63.158 0.00 0.00 31.60 5.01
949 979 4.864334 CCGGGCTCATCTGCACCC 62.864 72.222 0.00 0.00 39.12 4.61
950 980 4.100084 CGGGCTCATCTGCACCCA 62.100 66.667 8.42 0.00 42.97 4.51
951 981 2.439156 GGGCTCATCTGCACCCAC 60.439 66.667 2.99 0.00 42.33 4.61
952 982 2.821366 GGCTCATCTGCACCCACG 60.821 66.667 0.00 0.00 34.04 4.94
953 983 3.503363 GCTCATCTGCACCCACGC 61.503 66.667 0.00 0.00 0.00 5.34
954 984 2.267006 CTCATCTGCACCCACGCT 59.733 61.111 0.00 0.00 0.00 5.07
955 985 1.376424 CTCATCTGCACCCACGCTT 60.376 57.895 0.00 0.00 0.00 4.68
956 986 0.108186 CTCATCTGCACCCACGCTTA 60.108 55.000 0.00 0.00 0.00 3.09
957 987 0.108186 TCATCTGCACCCACGCTTAG 60.108 55.000 0.00 0.00 0.00 2.18
958 988 0.108186 CATCTGCACCCACGCTTAGA 60.108 55.000 0.00 0.00 0.00 2.10
961 991 1.202710 TCTGCACCCACGCTTAGAAAA 60.203 47.619 0.00 0.00 0.00 2.29
962 992 1.606668 CTGCACCCACGCTTAGAAAAA 59.393 47.619 0.00 0.00 0.00 1.94
1030 1060 6.489127 TTTGTGGTGGTAGATAATTTGACG 57.511 37.500 0.00 0.00 0.00 4.35
1032 1062 3.000925 GTGGTGGTAGATAATTTGACGCG 59.999 47.826 3.53 3.53 0.00 6.01
1034 1064 3.000925 GGTGGTAGATAATTTGACGCGTG 59.999 47.826 20.70 0.00 0.00 5.34
1036 1066 4.026804 GTGGTAGATAATTTGACGCGTGAG 60.027 45.833 20.70 0.00 0.00 3.51
1037 1067 3.489785 GGTAGATAATTTGACGCGTGAGG 59.510 47.826 20.70 0.00 0.00 3.86
1038 1068 3.247006 AGATAATTTGACGCGTGAGGT 57.753 42.857 20.70 0.00 0.00 3.85
1040 1070 0.793861 TAATTTGACGCGTGAGGTGC 59.206 50.000 20.70 0.06 0.00 5.01
1050 1080 2.123683 TGAGGTGCGCCCCAAAAA 60.124 55.556 12.68 0.00 34.57 1.94
1051 1081 1.532794 TGAGGTGCGCCCCAAAAAT 60.533 52.632 12.68 0.00 34.57 1.82
1052 1082 1.215382 GAGGTGCGCCCCAAAAATC 59.785 57.895 12.68 0.00 34.57 2.17
1053 1083 1.531739 GAGGTGCGCCCCAAAAATCA 61.532 55.000 12.68 0.00 34.57 2.57
1055 1085 1.737735 GTGCGCCCCAAAAATCAGC 60.738 57.895 4.18 0.00 0.00 4.26
1056 1086 1.907807 TGCGCCCCAAAAATCAGCT 60.908 52.632 4.18 0.00 0.00 4.24
1058 1088 1.876497 GCGCCCCAAAAATCAGCTCA 61.876 55.000 0.00 0.00 0.00 4.26
1059 1089 0.819582 CGCCCCAAAAATCAGCTCAT 59.180 50.000 0.00 0.00 0.00 2.90
1060 1090 1.205417 CGCCCCAAAAATCAGCTCATT 59.795 47.619 0.00 0.00 0.00 2.57
1061 1091 2.354003 CGCCCCAAAAATCAGCTCATTT 60.354 45.455 0.00 0.00 0.00 2.32
1062 1092 3.004862 GCCCCAAAAATCAGCTCATTTG 58.995 45.455 0.00 0.12 33.62 2.32
1063 1093 3.306919 GCCCCAAAAATCAGCTCATTTGA 60.307 43.478 0.00 0.00 35.34 2.69
1064 1094 4.501071 CCCCAAAAATCAGCTCATTTGAG 58.499 43.478 0.00 3.13 44.75 3.02
1075 1105 3.953874 CTCATTTGAGCATCTGAGCAG 57.046 47.619 0.00 0.00 35.13 4.24
1083 1270 1.592131 CATCTGAGCAGCTCTCGGC 60.592 63.158 23.15 0.00 45.76 5.54
1109 1296 7.654022 AAAAAGACAAAATCAGGGTCTGTAA 57.346 32.000 0.00 0.00 40.80 2.41
1110 1297 7.654022 AAAAGACAAAATCAGGGTCTGTAAA 57.346 32.000 0.00 0.00 40.80 2.01
1111 1298 7.654022 AAAGACAAAATCAGGGTCTGTAAAA 57.346 32.000 0.00 0.00 40.80 1.52
1112 1299 7.654022 AAGACAAAATCAGGGTCTGTAAAAA 57.346 32.000 0.00 0.00 40.80 1.94
1114 1301 7.661040 AGACAAAATCAGGGTCTGTAAAAATG 58.339 34.615 0.00 0.00 40.21 2.32
1115 1302 7.287696 AGACAAAATCAGGGTCTGTAAAAATGT 59.712 33.333 0.00 0.00 40.21 2.71
1117 1304 8.264347 ACAAAATCAGGGTCTGTAAAAATGTTT 58.736 29.630 0.00 0.00 32.61 2.83
1119 1306 9.758651 AAAATCAGGGTCTGTAAAAATGTTTAC 57.241 29.630 11.06 11.06 46.31 2.01
1120 1307 8.706322 AATCAGGGTCTGTAAAAATGTTTACT 57.294 30.769 17.45 0.00 46.29 2.24
1121 1308 7.504924 TCAGGGTCTGTAAAAATGTTTACTG 57.495 36.000 17.45 16.56 46.29 2.74
1122 1309 7.057894 TCAGGGTCTGTAAAAATGTTTACTGT 58.942 34.615 17.45 1.50 46.29 3.55
1123 1310 7.558444 TCAGGGTCTGTAAAAATGTTTACTGTT 59.442 33.333 17.45 5.03 46.29 3.16
1124 1311 7.860872 CAGGGTCTGTAAAAATGTTTACTGTTC 59.139 37.037 17.45 13.68 46.29 3.18
1125 1312 7.558444 AGGGTCTGTAAAAATGTTTACTGTTCA 59.442 33.333 17.45 1.80 46.29 3.18
1126 1313 7.646526 GGGTCTGTAAAAATGTTTACTGTTCAC 59.353 37.037 17.45 11.56 46.29 3.18
1127 1314 7.375017 GGTCTGTAAAAATGTTTACTGTTCACG 59.625 37.037 17.45 0.00 46.29 4.35
1128 1315 6.908284 TCTGTAAAAATGTTTACTGTTCACGC 59.092 34.615 17.45 0.00 46.29 5.34
1129 1316 6.552629 TGTAAAAATGTTTACTGTTCACGCA 58.447 32.000 17.45 0.00 46.29 5.24
1131 1318 4.893424 AAATGTTTACTGTTCACGCACT 57.107 36.364 0.00 0.00 0.00 4.40
1134 1321 3.004171 TGTTTACTGTTCACGCACTGTT 58.996 40.909 0.00 0.00 31.81 3.16
1135 1322 3.437395 TGTTTACTGTTCACGCACTGTTT 59.563 39.130 0.00 0.00 31.81 2.83
1136 1323 4.083217 TGTTTACTGTTCACGCACTGTTTT 60.083 37.500 0.00 0.00 31.81 2.43
1137 1324 2.542766 ACTGTTCACGCACTGTTTTG 57.457 45.000 0.00 0.00 0.00 2.44
1139 1574 2.159572 ACTGTTCACGCACTGTTTTGAC 60.160 45.455 0.00 0.00 0.00 3.18
1142 1577 0.393132 TCACGCACTGTTTTGACCCA 60.393 50.000 0.00 0.00 0.00 4.51
1143 1578 0.453793 CACGCACTGTTTTGACCCAA 59.546 50.000 0.00 0.00 0.00 4.12
1147 1582 3.381908 ACGCACTGTTTTGACCCAATTTA 59.618 39.130 0.00 0.00 0.00 1.40
1149 1584 4.621034 CGCACTGTTTTGACCCAATTTATC 59.379 41.667 0.00 0.00 0.00 1.75
1153 1588 7.226523 GCACTGTTTTGACCCAATTTATCTTTT 59.773 33.333 0.00 0.00 0.00 2.27
1154 1589 9.108284 CACTGTTTTGACCCAATTTATCTTTTT 57.892 29.630 0.00 0.00 0.00 1.94
1169 1604 4.481195 TTTTTGCCGAGAGCTGCT 57.519 50.000 0.00 0.00 44.23 4.24
1171 1606 0.534877 TTTTTGCCGAGAGCTGCTCA 60.535 50.000 29.49 8.15 44.15 4.26
1172 1607 0.952497 TTTTGCCGAGAGCTGCTCAG 60.952 55.000 29.49 21.79 44.15 3.35
1173 1608 1.820010 TTTGCCGAGAGCTGCTCAGA 61.820 55.000 29.49 7.15 44.15 3.27
1174 1609 1.611474 TTGCCGAGAGCTGCTCAGAT 61.611 55.000 29.49 10.97 44.15 2.90
1177 1612 0.248990 CCGAGAGCTGCTCAGATGTC 60.249 60.000 29.49 17.18 44.15 3.06
1179 1614 0.822811 GAGAGCTGCTCAGATGTCCA 59.177 55.000 29.49 0.00 43.38 4.02
1180 1615 1.206610 GAGAGCTGCTCAGATGTCCAA 59.793 52.381 29.49 0.00 43.38 3.53
1181 1616 1.627329 AGAGCTGCTCAGATGTCCAAA 59.373 47.619 29.49 0.00 32.06 3.28
1183 1618 3.015327 GAGCTGCTCAGATGTCCAAATT 58.985 45.455 24.02 0.00 0.00 1.82
1184 1619 4.080695 AGAGCTGCTCAGATGTCCAAATTA 60.081 41.667 29.49 0.00 32.06 1.40
1185 1620 4.197750 AGCTGCTCAGATGTCCAAATTAG 58.802 43.478 0.00 0.00 0.00 1.73
1186 1621 3.944015 GCTGCTCAGATGTCCAAATTAGT 59.056 43.478 0.29 0.00 0.00 2.24
1187 1622 4.397417 GCTGCTCAGATGTCCAAATTAGTT 59.603 41.667 0.29 0.00 0.00 2.24
1188 1623 5.675575 GCTGCTCAGATGTCCAAATTAGTTG 60.676 44.000 0.29 0.00 36.94 3.16
1190 1625 6.003326 TGCTCAGATGTCCAAATTAGTTGAA 58.997 36.000 0.00 0.00 39.87 2.69
1191 1626 6.660521 TGCTCAGATGTCCAAATTAGTTGAAT 59.339 34.615 0.00 0.00 39.87 2.57
1192 1627 7.177216 TGCTCAGATGTCCAAATTAGTTGAATT 59.823 33.333 0.00 0.00 39.87 2.17
1193 1628 8.031277 GCTCAGATGTCCAAATTAGTTGAATTT 58.969 33.333 0.00 0.00 46.60 1.82
1194 1629 9.918630 CTCAGATGTCCAAATTAGTTGAATTTT 57.081 29.630 0.00 0.00 43.83 1.82
1195 1630 9.695526 TCAGATGTCCAAATTAGTTGAATTTTG 57.304 29.630 0.00 0.00 43.83 2.44
1196 1631 8.928733 CAGATGTCCAAATTAGTTGAATTTTGG 58.071 33.333 6.89 6.89 43.83 3.28
1197 1632 8.096414 AGATGTCCAAATTAGTTGAATTTTGGG 58.904 33.333 12.01 2.75 43.83 4.12
1199 1634 5.411361 GTCCAAATTAGTTGAATTTTGGGGC 59.589 40.000 12.01 0.75 43.83 5.80
1202 1637 1.621992 TAGTTGAATTTTGGGGCGCA 58.378 45.000 10.83 0.00 0.00 6.09
1203 1638 0.033366 AGTTGAATTTTGGGGCGCAC 59.967 50.000 10.83 4.83 0.00 5.34
1204 1639 1.006805 TTGAATTTTGGGGCGCACG 60.007 52.632 10.83 0.00 0.00 5.34
1224 1659 4.085721 CGTCACGCGTCAAATTATCTAC 57.914 45.455 9.86 0.00 35.54 2.59
1225 1660 3.061403 CGTCACGCGTCAAATTATCTACC 60.061 47.826 9.86 0.00 35.54 3.18
1227 1662 3.861113 TCACGCGTCAAATTATCTACCAC 59.139 43.478 9.86 0.00 0.00 4.16
1228 1663 3.000925 CACGCGTCAAATTATCTACCACC 59.999 47.826 9.86 0.00 0.00 4.61
1229 1664 3.191669 CGCGTCAAATTATCTACCACCA 58.808 45.455 0.00 0.00 0.00 4.17
1230 1665 3.000925 CGCGTCAAATTATCTACCACCAC 59.999 47.826 0.00 0.00 0.00 4.16
1231 1666 3.936453 GCGTCAAATTATCTACCACCACA 59.064 43.478 0.00 0.00 0.00 4.17
1232 1667 4.393680 GCGTCAAATTATCTACCACCACAA 59.606 41.667 0.00 0.00 0.00 3.33
1233 1668 5.106475 GCGTCAAATTATCTACCACCACAAA 60.106 40.000 0.00 0.00 0.00 2.83
1234 1669 6.568844 GCGTCAAATTATCTACCACCACAAAA 60.569 38.462 0.00 0.00 0.00 2.44
1235 1670 7.364200 CGTCAAATTATCTACCACCACAAAAA 58.636 34.615 0.00 0.00 0.00 1.94
1297 1817 1.059098 TTTTGCTGAGAGGGAGCAGA 58.941 50.000 0.00 0.00 46.81 4.26
1298 1818 1.283347 TTTGCTGAGAGGGAGCAGAT 58.717 50.000 0.00 0.00 46.81 2.90
1299 1819 0.540454 TTGCTGAGAGGGAGCAGATG 59.460 55.000 0.00 0.00 46.81 2.90
1300 1820 0.325016 TGCTGAGAGGGAGCAGATGA 60.325 55.000 0.00 0.00 41.56 2.92
1301 1821 0.390124 GCTGAGAGGGAGCAGATGAG 59.610 60.000 0.00 0.00 36.40 2.90
1302 1822 1.779221 CTGAGAGGGAGCAGATGAGT 58.221 55.000 0.00 0.00 34.06 3.41
1304 1824 1.039856 GAGAGGGAGCAGATGAGTCC 58.960 60.000 0.00 0.00 0.00 3.85
1306 1826 1.743321 GAGGGAGCAGATGAGTCCGG 61.743 65.000 0.00 0.00 0.00 5.14
1307 1827 2.801631 GGGAGCAGATGAGTCCGGG 61.802 68.421 0.00 0.00 0.00 5.73
1308 1828 2.107953 GAGCAGATGAGTCCGGGC 59.892 66.667 0.00 0.00 0.00 6.13
1310 1830 2.512515 GCAGATGAGTCCGGGCAC 60.513 66.667 9.71 1.19 0.00 5.01
1324 1844 1.847818 GGGCACCGTTTTGAGTTTTC 58.152 50.000 0.00 0.00 40.86 2.29
1325 1845 1.537348 GGGCACCGTTTTGAGTTTTCC 60.537 52.381 0.00 0.00 40.86 3.13
1393 2051 2.847234 TCACGGGCCAAGTGGACT 60.847 61.111 24.46 0.00 44.77 3.85
1406 2064 2.676471 GGACTGGCCCATTTGCGT 60.676 61.111 0.00 0.00 0.00 5.24
1721 2412 2.732016 CAACGACGTCACCCTCCA 59.268 61.111 17.16 0.00 0.00 3.86
1731 2422 2.122547 ACCCTCCACACCGTCCTT 60.123 61.111 0.00 0.00 0.00 3.36
1919 2611 3.622826 CCCGTCAGGTCCGTGGTT 61.623 66.667 0.00 0.00 35.12 3.67
1924 2616 0.245813 GTCAGGTCCGTGGTTACCTC 59.754 60.000 2.07 0.00 44.43 3.85
2037 2730 4.814294 GGCGCTCATCGACGGGTT 62.814 66.667 7.64 0.00 41.67 4.11
2039 2732 2.180769 CGCTCATCGACGGGTTCA 59.819 61.111 0.00 0.00 41.67 3.18
2226 2919 2.824041 GGGCAACATCCGCATCGT 60.824 61.111 0.00 0.00 39.74 3.73
2272 2965 1.668151 GTGCGGTCAGGTGGAGTTC 60.668 63.158 0.00 0.00 0.00 3.01
2324 3017 1.458777 ACGGTGGTCTCCTGGAACA 60.459 57.895 0.00 0.00 39.67 3.18
2374 3067 2.101575 TGCACGGACGCTATCGAC 59.898 61.111 0.00 0.00 39.41 4.20
2404 3097 1.452108 GATGCGGAGGAAGGGGTTG 60.452 63.158 0.00 0.00 0.00 3.77
2407 3100 1.074248 GCGGAGGAAGGGGTTGAAA 59.926 57.895 0.00 0.00 0.00 2.69
2422 3115 2.740447 GTTGAAACCAGATACGGTGACC 59.260 50.000 0.00 0.00 39.95 4.02
2439 3132 2.579201 CTTCACGGGCGTCCTCAT 59.421 61.111 3.66 0.00 0.00 2.90
2563 3256 3.371063 GTGGTCGACCTGCTCGGA 61.371 66.667 33.39 10.38 43.16 4.55
2708 3401 0.826715 GCTGATGCAGTACCTCCTCA 59.173 55.000 0.00 0.00 39.41 3.86
2766 3459 0.744281 TCGAACATCTATGCTGCCGA 59.256 50.000 0.00 0.00 0.00 5.54
2803 3496 4.035102 GGCAAGGTCCGGAGCCTT 62.035 66.667 29.33 26.40 46.39 4.35
2832 3525 1.261238 CGGGGAGTGAAGAAGAGGCT 61.261 60.000 0.00 0.00 0.00 4.58
2862 3555 2.102357 CGTGGAGATCGACGGTGG 59.898 66.667 9.22 0.00 42.92 4.61
2863 3556 2.697761 CGTGGAGATCGACGGTGGT 61.698 63.158 9.22 0.00 42.92 4.16
2961 3654 0.106819 GAGATGGCAAGGCATGAGGT 60.107 55.000 14.18 0.00 0.00 3.85
2983 3743 3.070015 TGTGAGTGAGCATTGAAGACTGA 59.930 43.478 0.00 0.00 0.00 3.41
3030 3790 0.179248 GTTTCGAGCGCTTGTACAGC 60.179 55.000 23.78 8.21 46.31 4.40
3075 3993 5.050499 CCACGATTGATTAGAGATCTGTTGC 60.050 44.000 0.00 0.00 0.00 4.17
3172 4674 4.937620 TCAGCTCAATCAAACATAGACACC 59.062 41.667 0.00 0.00 0.00 4.16
3195 5618 3.823304 GCATTTCTGGAAGGTGAAGAACT 59.177 43.478 0.00 0.00 29.89 3.01
3285 5709 7.088272 TCTTCGATTATATCACCCGTAATGTG 58.912 38.462 0.00 0.00 35.01 3.21
3286 5710 5.716094 TCGATTATATCACCCGTAATGTGG 58.284 41.667 0.00 0.00 34.46 4.17
3287 5711 5.477637 TCGATTATATCACCCGTAATGTGGA 59.522 40.000 0.00 0.00 34.46 4.02
3288 5712 6.153851 TCGATTATATCACCCGTAATGTGGAT 59.846 38.462 0.00 0.00 34.46 3.41
3289 5713 6.255670 CGATTATATCACCCGTAATGTGGATG 59.744 42.308 0.00 0.00 34.46 3.51
3290 5714 1.967319 ATCACCCGTAATGTGGATGC 58.033 50.000 0.00 0.00 34.46 3.91
3291 5715 0.908910 TCACCCGTAATGTGGATGCT 59.091 50.000 0.00 0.00 34.46 3.79
3292 5716 2.112190 TCACCCGTAATGTGGATGCTA 58.888 47.619 0.00 0.00 34.46 3.49
3293 5717 2.703536 TCACCCGTAATGTGGATGCTAT 59.296 45.455 0.00 0.00 34.46 2.97
3294 5718 3.135712 TCACCCGTAATGTGGATGCTATT 59.864 43.478 0.00 0.00 34.46 1.73
3295 5719 4.345547 TCACCCGTAATGTGGATGCTATTA 59.654 41.667 0.00 0.00 34.46 0.98
3296 5720 4.451096 CACCCGTAATGTGGATGCTATTAC 59.549 45.833 11.89 11.89 35.16 1.89
3298 5722 4.307834 CGTAATGTGGATGCTATTACGC 57.692 45.455 22.96 4.52 46.73 4.42
3299 5723 3.181544 CGTAATGTGGATGCTATTACGCG 60.182 47.826 22.96 3.53 46.73 6.01
3300 5724 1.148310 ATGTGGATGCTATTACGCGC 58.852 50.000 5.73 0.00 0.00 6.86
3301 5725 1.212455 TGTGGATGCTATTACGCGCG 61.212 55.000 30.96 30.96 0.00 6.86
3302 5726 2.307309 TGGATGCTATTACGCGCGC 61.307 57.895 32.58 23.91 0.00 6.86
3332 5756 4.162640 TCGATTTCCGACAGCGTG 57.837 55.556 0.00 0.00 43.23 5.34
3333 5757 1.582461 TCGATTTCCGACAGCGTGA 59.418 52.632 0.00 0.00 43.23 4.35
3334 5758 0.456142 TCGATTTCCGACAGCGTGAG 60.456 55.000 0.00 0.00 43.23 3.51
3335 5759 0.732880 CGATTTCCGACAGCGTGAGT 60.733 55.000 0.00 0.00 41.76 3.41
3336 5760 1.429463 GATTTCCGACAGCGTGAGTT 58.571 50.000 0.00 0.00 35.23 3.01
3337 5761 1.798813 GATTTCCGACAGCGTGAGTTT 59.201 47.619 0.00 0.00 35.23 2.66
3338 5762 1.214367 TTTCCGACAGCGTGAGTTTC 58.786 50.000 0.00 0.00 35.23 2.78
3339 5763 0.599204 TTCCGACAGCGTGAGTTTCC 60.599 55.000 0.00 0.00 35.23 3.13
3340 5764 1.006102 CCGACAGCGTGAGTTTCCT 60.006 57.895 0.00 0.00 35.23 3.36
3341 5765 0.600255 CCGACAGCGTGAGTTTCCTT 60.600 55.000 0.00 0.00 35.23 3.36
3342 5766 0.508641 CGACAGCGTGAGTTTCCTTG 59.491 55.000 0.00 0.00 0.00 3.61
3343 5767 1.583054 GACAGCGTGAGTTTCCTTGT 58.417 50.000 0.00 0.00 0.00 3.16
3344 5768 2.750948 GACAGCGTGAGTTTCCTTGTA 58.249 47.619 0.00 0.00 0.00 2.41
3345 5769 3.128349 GACAGCGTGAGTTTCCTTGTAA 58.872 45.455 0.00 0.00 0.00 2.41
3346 5770 3.537580 ACAGCGTGAGTTTCCTTGTAAA 58.462 40.909 0.00 0.00 0.00 2.01
3347 5771 3.560068 ACAGCGTGAGTTTCCTTGTAAAG 59.440 43.478 0.00 0.00 45.69 1.85
3362 5786 3.686016 TGTAAAGAAATCAGGGTGAGGC 58.314 45.455 0.00 0.00 0.00 4.70
3363 5787 3.330701 TGTAAAGAAATCAGGGTGAGGCT 59.669 43.478 0.00 0.00 0.00 4.58
3364 5788 4.534500 TGTAAAGAAATCAGGGTGAGGCTA 59.466 41.667 0.00 0.00 0.00 3.93
3365 5789 4.657814 AAAGAAATCAGGGTGAGGCTAA 57.342 40.909 0.00 0.00 0.00 3.09
3366 5790 4.870021 AAGAAATCAGGGTGAGGCTAAT 57.130 40.909 0.00 0.00 0.00 1.73
3367 5791 4.870021 AGAAATCAGGGTGAGGCTAATT 57.130 40.909 0.00 0.00 0.00 1.40
3368 5792 5.975988 AGAAATCAGGGTGAGGCTAATTA 57.024 39.130 0.00 0.00 0.00 1.40
3369 5793 6.327386 AGAAATCAGGGTGAGGCTAATTAA 57.673 37.500 0.00 0.00 0.00 1.40
3370 5794 6.915786 AGAAATCAGGGTGAGGCTAATTAAT 58.084 36.000 0.00 0.00 0.00 1.40
3371 5795 7.001073 AGAAATCAGGGTGAGGCTAATTAATC 58.999 38.462 0.00 0.00 0.00 1.75
3372 5796 5.912149 ATCAGGGTGAGGCTAATTAATCA 57.088 39.130 0.00 0.00 0.00 2.57
3373 5797 5.296151 TCAGGGTGAGGCTAATTAATCAG 57.704 43.478 0.00 0.00 0.00 2.90
3374 5798 4.103153 TCAGGGTGAGGCTAATTAATCAGG 59.897 45.833 0.00 0.00 0.00 3.86
3375 5799 3.149981 GGGTGAGGCTAATTAATCAGGC 58.850 50.000 3.93 3.93 37.60 4.85
3376 5800 3.435026 GGGTGAGGCTAATTAATCAGGCA 60.435 47.826 14.25 0.00 39.68 4.75
3377 5801 4.401925 GGTGAGGCTAATTAATCAGGCAT 58.598 43.478 14.25 4.79 39.68 4.40
3378 5802 5.514834 GGGTGAGGCTAATTAATCAGGCATA 60.515 44.000 14.25 0.19 39.68 3.14
3379 5803 5.645497 GGTGAGGCTAATTAATCAGGCATAG 59.355 44.000 14.25 0.70 39.68 2.23
3380 5804 5.123027 GTGAGGCTAATTAATCAGGCATAGC 59.877 44.000 14.25 9.85 39.68 2.97
3381 5805 4.256920 AGGCTAATTAATCAGGCATAGCG 58.743 43.478 14.25 0.00 39.68 4.26
3382 5806 3.375299 GGCTAATTAATCAGGCATAGCGG 59.625 47.826 7.29 0.00 37.28 5.52
3383 5807 3.375299 GCTAATTAATCAGGCATAGCGGG 59.625 47.826 0.17 0.00 0.00 6.13
3384 5808 1.826385 ATTAATCAGGCATAGCGGGC 58.174 50.000 0.00 0.00 0.00 6.13
3402 5826 4.012138 CCCCCACCGGTTGAAATC 57.988 61.111 2.97 0.00 0.00 2.17
3403 5827 1.075836 CCCCCACCGGTTGAAATCA 59.924 57.895 2.97 0.00 0.00 2.57
3404 5828 1.248101 CCCCCACCGGTTGAAATCAC 61.248 60.000 2.97 0.00 0.00 3.06
3405 5829 1.582610 CCCCACCGGTTGAAATCACG 61.583 60.000 2.97 0.00 0.00 4.35
3408 5832 3.585856 CCGGTTGAAATCACGGGG 58.414 61.111 0.00 0.00 42.48 5.73
3409 5833 2.696759 CCGGTTGAAATCACGGGGC 61.697 63.158 0.00 0.00 42.48 5.80
3410 5834 1.969064 CGGTTGAAATCACGGGGCA 60.969 57.895 0.00 0.00 0.00 5.36
3411 5835 1.883021 GGTTGAAATCACGGGGCAG 59.117 57.895 0.00 0.00 0.00 4.85
3412 5836 0.608035 GGTTGAAATCACGGGGCAGA 60.608 55.000 0.00 0.00 0.00 4.26
3413 5837 0.804989 GTTGAAATCACGGGGCAGAG 59.195 55.000 0.00 0.00 0.00 3.35
3414 5838 0.400213 TTGAAATCACGGGGCAGAGT 59.600 50.000 0.00 0.00 0.00 3.24
3415 5839 0.400213 TGAAATCACGGGGCAGAGTT 59.600 50.000 0.00 0.00 0.00 3.01
3416 5840 1.202879 TGAAATCACGGGGCAGAGTTT 60.203 47.619 0.00 0.00 0.00 2.66
3417 5841 1.886542 GAAATCACGGGGCAGAGTTTT 59.113 47.619 0.00 0.00 0.00 2.43
3418 5842 2.871096 AATCACGGGGCAGAGTTTTA 57.129 45.000 0.00 0.00 0.00 1.52
3419 5843 3.366052 AATCACGGGGCAGAGTTTTAT 57.634 42.857 0.00 0.00 0.00 1.40
3420 5844 4.497291 AATCACGGGGCAGAGTTTTATA 57.503 40.909 0.00 0.00 0.00 0.98
3421 5845 4.706842 ATCACGGGGCAGAGTTTTATAT 57.293 40.909 0.00 0.00 0.00 0.86
3422 5846 5.818678 ATCACGGGGCAGAGTTTTATATA 57.181 39.130 0.00 0.00 0.00 0.86
3423 5847 5.818678 TCACGGGGCAGAGTTTTATATAT 57.181 39.130 0.00 0.00 0.00 0.86
3424 5848 5.547465 TCACGGGGCAGAGTTTTATATATG 58.453 41.667 0.00 0.00 0.00 1.78
3425 5849 4.695455 CACGGGGCAGAGTTTTATATATGG 59.305 45.833 0.00 0.00 0.00 2.74
3426 5850 4.595781 ACGGGGCAGAGTTTTATATATGGA 59.404 41.667 0.00 0.00 0.00 3.41
3427 5851 5.072600 ACGGGGCAGAGTTTTATATATGGAA 59.927 40.000 0.00 0.00 0.00 3.53
3428 5852 5.643777 CGGGGCAGAGTTTTATATATGGAAG 59.356 44.000 0.00 0.00 0.00 3.46
3429 5853 5.946377 GGGGCAGAGTTTTATATATGGAAGG 59.054 44.000 0.00 0.00 0.00 3.46
3430 5854 6.240176 GGGGCAGAGTTTTATATATGGAAGGA 60.240 42.308 0.00 0.00 0.00 3.36
3431 5855 6.881602 GGGCAGAGTTTTATATATGGAAGGAG 59.118 42.308 0.00 0.00 0.00 3.69
3432 5856 7.256691 GGGCAGAGTTTTATATATGGAAGGAGA 60.257 40.741 0.00 0.00 0.00 3.71
3433 5857 7.604545 GGCAGAGTTTTATATATGGAAGGAGAC 59.395 40.741 0.00 0.00 0.00 3.36
3434 5858 8.150945 GCAGAGTTTTATATATGGAAGGAGACA 58.849 37.037 0.00 0.00 0.00 3.41
3435 5859 9.482627 CAGAGTTTTATATATGGAAGGAGACAC 57.517 37.037 0.00 0.00 0.00 3.67
3436 5860 9.440761 AGAGTTTTATATATGGAAGGAGACACT 57.559 33.333 0.00 0.00 0.00 3.55
3439 5863 9.930693 GTTTTATATATGGAAGGAGACACTAGG 57.069 37.037 0.00 0.00 0.00 3.02
3440 5864 7.719871 TTATATATGGAAGGAGACACTAGGC 57.280 40.000 0.00 0.00 0.00 3.93
3441 5865 1.501582 ATGGAAGGAGACACTAGGCC 58.498 55.000 0.00 0.00 0.00 5.19
3442 5866 0.617820 TGGAAGGAGACACTAGGCCC 60.618 60.000 0.00 0.00 0.00 5.80
3443 5867 1.338890 GGAAGGAGACACTAGGCCCC 61.339 65.000 0.00 0.00 0.00 5.80
3444 5868 0.617820 GAAGGAGACACTAGGCCCCA 60.618 60.000 0.00 0.00 0.00 4.96
3445 5869 0.910088 AAGGAGACACTAGGCCCCAC 60.910 60.000 0.00 0.00 0.00 4.61
3446 5870 1.306226 GGAGACACTAGGCCCCACT 60.306 63.158 0.00 0.00 0.00 4.00
3447 5871 0.032416 GGAGACACTAGGCCCCACTA 60.032 60.000 0.00 0.00 0.00 2.74
3448 5872 1.413227 GGAGACACTAGGCCCCACTAT 60.413 57.143 0.00 0.00 0.00 2.12
3449 5873 2.399580 GAGACACTAGGCCCCACTATT 58.600 52.381 0.00 0.00 0.00 1.73
3450 5874 2.103263 GAGACACTAGGCCCCACTATTG 59.897 54.545 0.00 0.00 31.95 1.90
3451 5875 2.116238 GACACTAGGCCCCACTATTGA 58.884 52.381 0.00 0.00 30.70 2.57
3452 5876 2.504175 GACACTAGGCCCCACTATTGAA 59.496 50.000 0.00 0.00 30.70 2.69
3453 5877 2.916934 ACACTAGGCCCCACTATTGAAA 59.083 45.455 0.00 0.00 30.70 2.69
3454 5878 3.527665 ACACTAGGCCCCACTATTGAAAT 59.472 43.478 0.00 0.00 30.70 2.17
3455 5879 4.137543 CACTAGGCCCCACTATTGAAATC 58.862 47.826 0.00 0.00 0.00 2.17
3456 5880 3.785887 ACTAGGCCCCACTATTGAAATCA 59.214 43.478 0.00 0.00 0.00 2.57
3457 5881 3.018423 AGGCCCCACTATTGAAATCAC 57.982 47.619 0.00 0.00 0.00 3.06
3458 5882 1.676006 GGCCCCACTATTGAAATCACG 59.324 52.381 0.00 0.00 0.00 4.35
3459 5883 1.676006 GCCCCACTATTGAAATCACGG 59.324 52.381 0.00 0.00 0.00 4.94
3460 5884 2.297701 CCCCACTATTGAAATCACGGG 58.702 52.381 0.00 0.00 0.00 5.28
3461 5885 2.297701 CCCACTATTGAAATCACGGGG 58.702 52.381 0.00 0.00 0.00 5.73
3462 5886 1.676006 CCACTATTGAAATCACGGGGC 59.324 52.381 0.00 0.00 0.00 5.80
3463 5887 2.364632 CACTATTGAAATCACGGGGCA 58.635 47.619 0.00 0.00 0.00 5.36
3464 5888 2.355756 CACTATTGAAATCACGGGGCAG 59.644 50.000 0.00 0.00 0.00 4.85
3465 5889 2.238646 ACTATTGAAATCACGGGGCAGA 59.761 45.455 0.00 0.00 0.00 4.26
3466 5890 1.755179 ATTGAAATCACGGGGCAGAG 58.245 50.000 0.00 0.00 0.00 3.35
3467 5891 0.400213 TTGAAATCACGGGGCAGAGT 59.600 50.000 0.00 0.00 0.00 3.24
3468 5892 0.400213 TGAAATCACGGGGCAGAGTT 59.600 50.000 0.00 0.00 0.00 3.01
3469 5893 1.202879 TGAAATCACGGGGCAGAGTTT 60.203 47.619 0.00 0.00 0.00 2.66
3470 5894 1.886542 GAAATCACGGGGCAGAGTTTT 59.113 47.619 0.00 0.00 0.00 2.43
3471 5895 2.871096 AATCACGGGGCAGAGTTTTA 57.129 45.000 0.00 0.00 0.00 1.52
3472 5896 3.366052 AATCACGGGGCAGAGTTTTAT 57.634 42.857 0.00 0.00 0.00 1.40
3473 5897 2.107950 TCACGGGGCAGAGTTTTATG 57.892 50.000 0.00 0.00 0.00 1.90
3474 5898 1.094785 CACGGGGCAGAGTTTTATGG 58.905 55.000 0.00 0.00 0.00 2.74
3475 5899 0.988832 ACGGGGCAGAGTTTTATGGA 59.011 50.000 0.00 0.00 0.00 3.41
3476 5900 1.564348 ACGGGGCAGAGTTTTATGGAT 59.436 47.619 0.00 0.00 0.00 3.41
3477 5901 1.949525 CGGGGCAGAGTTTTATGGATG 59.050 52.381 0.00 0.00 0.00 3.51
3478 5902 2.310538 GGGGCAGAGTTTTATGGATGG 58.689 52.381 0.00 0.00 0.00 3.51
3479 5903 2.358195 GGGGCAGAGTTTTATGGATGGT 60.358 50.000 0.00 0.00 0.00 3.55
3480 5904 2.952310 GGGCAGAGTTTTATGGATGGTC 59.048 50.000 0.00 0.00 0.00 4.02
3481 5905 3.372025 GGGCAGAGTTTTATGGATGGTCT 60.372 47.826 0.00 0.00 0.00 3.85
3482 5906 3.629398 GGCAGAGTTTTATGGATGGTCTG 59.371 47.826 0.00 0.00 34.37 3.51
3483 5907 3.629398 GCAGAGTTTTATGGATGGTCTGG 59.371 47.826 0.00 0.00 32.33 3.86
3484 5908 4.626287 GCAGAGTTTTATGGATGGTCTGGA 60.626 45.833 0.00 0.00 32.33 3.86
3485 5909 4.878397 CAGAGTTTTATGGATGGTCTGGAC 59.122 45.833 0.00 0.00 0.00 4.02
3486 5910 4.536090 AGAGTTTTATGGATGGTCTGGACA 59.464 41.667 3.10 0.00 0.00 4.02
3487 5911 5.192522 AGAGTTTTATGGATGGTCTGGACAT 59.807 40.000 3.10 0.00 0.00 3.06
3488 5912 5.195940 AGTTTTATGGATGGTCTGGACATG 58.804 41.667 3.10 0.00 0.00 3.21
3489 5913 4.860802 TTTATGGATGGTCTGGACATGT 57.139 40.909 0.00 0.00 0.00 3.21
3490 5914 2.723322 ATGGATGGTCTGGACATGTG 57.277 50.000 1.15 0.00 0.00 3.21
3491 5915 0.620030 TGGATGGTCTGGACATGTGG 59.380 55.000 1.15 0.00 0.00 4.17
3492 5916 0.107017 GGATGGTCTGGACATGTGGG 60.107 60.000 1.15 0.00 0.00 4.61
3493 5917 0.620556 GATGGTCTGGACATGTGGGT 59.379 55.000 1.15 0.00 0.00 4.51
3494 5918 0.329261 ATGGTCTGGACATGTGGGTG 59.671 55.000 1.15 0.00 0.00 4.61
3495 5919 1.002134 GGTCTGGACATGTGGGTGG 60.002 63.158 1.15 0.00 0.00 4.61
3496 5920 1.002134 GTCTGGACATGTGGGTGGG 60.002 63.158 1.15 0.00 0.00 4.61
3497 5921 2.361610 CTGGACATGTGGGTGGGC 60.362 66.667 1.15 0.00 0.00 5.36
3498 5922 3.944250 CTGGACATGTGGGTGGGCC 62.944 68.421 1.15 0.00 0.00 5.80
3515 5939 4.697756 CCTGCGCCCTTTCCGACA 62.698 66.667 4.18 0.00 0.00 4.35
3516 5940 3.121030 CTGCGCCCTTTCCGACAG 61.121 66.667 4.18 0.00 0.00 3.51
3517 5941 3.883744 CTGCGCCCTTTCCGACAGT 62.884 63.158 4.18 0.00 0.00 3.55
3518 5942 3.423154 GCGCCCTTTCCGACAGTG 61.423 66.667 0.00 0.00 0.00 3.66
3519 5943 2.030562 CGCCCTTTCCGACAGTGT 59.969 61.111 0.00 0.00 0.00 3.55
3520 5944 2.027625 CGCCCTTTCCGACAGTGTC 61.028 63.158 13.56 13.56 0.00 3.67
3529 5953 3.521220 GACAGTGTCGTACGCGCG 61.521 66.667 30.96 30.96 38.14 6.86
3530 5954 3.916371 GACAGTGTCGTACGCGCGA 62.916 63.158 39.36 17.83 38.68 5.87
3531 5955 2.576053 CAGTGTCGTACGCGCGAT 60.576 61.111 39.36 22.80 43.07 4.58
3532 5956 1.297085 CAGTGTCGTACGCGCGATA 60.297 57.895 39.36 21.67 43.07 2.92
3533 5957 3.196815 GTGTCGTACGCGCGATAC 58.803 61.111 39.36 29.46 43.38 2.24
3534 5958 2.023181 TGTCGTACGCGCGATACC 59.977 61.111 39.36 20.49 43.07 2.73
3535 5959 2.723633 GTCGTACGCGCGATACCC 60.724 66.667 39.36 20.15 43.07 3.69
3536 5960 3.201297 TCGTACGCGCGATACCCA 61.201 61.111 39.36 18.18 35.83 4.51
3537 5961 2.724721 CGTACGCGCGATACCCAG 60.725 66.667 39.36 16.89 0.00 4.45
3538 5962 2.354305 GTACGCGCGATACCCAGG 60.354 66.667 39.36 3.76 0.00 4.45
3539 5963 2.829914 TACGCGCGATACCCAGGT 60.830 61.111 39.36 13.47 0.00 4.00
3540 5964 2.837883 TACGCGCGATACCCAGGTC 61.838 63.158 39.36 0.00 0.00 3.85
3542 5966 3.896133 GCGCGATACCCAGGTCGA 61.896 66.667 12.10 0.00 40.11 4.20
3543 5967 2.331805 CGCGATACCCAGGTCGAG 59.668 66.667 0.00 0.00 40.11 4.04
3544 5968 2.027751 GCGATACCCAGGTCGAGC 59.972 66.667 6.48 6.48 40.11 5.03
3545 5969 2.331805 CGATACCCAGGTCGAGCG 59.668 66.667 9.28 4.28 40.11 5.03
3546 5970 2.478890 CGATACCCAGGTCGAGCGT 61.479 63.158 9.28 3.90 40.11 5.07
3547 5971 1.814527 GATACCCAGGTCGAGCGTT 59.185 57.895 9.28 0.00 0.00 4.84
3548 5972 0.527817 GATACCCAGGTCGAGCGTTG 60.528 60.000 9.28 2.78 0.00 4.10
3549 5973 2.573609 ATACCCAGGTCGAGCGTTGC 62.574 60.000 9.28 0.00 0.00 4.17
3551 5975 4.680237 CCAGGTCGAGCGTTGCCA 62.680 66.667 9.28 0.00 0.00 4.92
3552 5976 3.414700 CAGGTCGAGCGTTGCCAC 61.415 66.667 9.28 0.00 0.00 5.01
3578 6002 3.127533 GCCCGCGCATGAGTCTTT 61.128 61.111 8.75 0.00 34.03 2.52
3579 6003 2.690778 GCCCGCGCATGAGTCTTTT 61.691 57.895 8.75 0.00 34.03 2.27
3580 6004 1.425428 CCCGCGCATGAGTCTTTTC 59.575 57.895 8.75 0.00 0.00 2.29
3581 6005 1.059369 CCGCGCATGAGTCTTTTCG 59.941 57.895 8.75 0.00 0.00 3.46
3652 6076 4.885907 ACTTCCATATTCATTGCAGTCAGG 59.114 41.667 0.00 0.00 0.00 3.86
3696 7069 5.511545 GCTCACCTACTCCTCTTTCAAAGAA 60.512 44.000 0.48 0.00 37.02 2.52
3815 7582 5.323371 ACATGGTGCAAACATATACAACC 57.677 39.130 4.97 0.00 0.00 3.77
3978 7768 3.181493 GCAATGCCTTAATCACAGAGTGG 60.181 47.826 0.00 0.00 33.87 4.00
3982 7772 2.359900 CCTTAATCACAGAGTGGGTGC 58.640 52.381 0.00 0.00 36.22 5.01
4006 7796 5.295292 CACAGCTGTATTTGGAGTAAGATGG 59.705 44.000 21.20 0.00 0.00 3.51
4095 8007 9.793259 AGAACCAACAGTAGATTAGAAATTTGA 57.207 29.630 0.00 0.00 0.00 2.69
4121 8033 2.299297 TCTTCGGTTCTTTGGTCTCTCC 59.701 50.000 0.00 0.00 0.00 3.71
4133 8045 3.583228 TGGTCTCTCCTTGTTACTCCAA 58.417 45.455 0.00 0.00 37.07 3.53
4178 8090 6.824305 AACTGAAAAGGATCCAACATGTAG 57.176 37.500 15.82 5.78 0.00 2.74
4259 8179 7.105588 TGCAGATCTTCTAAGCAAATCTACAA 58.894 34.615 2.39 0.00 31.42 2.41
4322 8242 5.013079 ACATAGACACTGAAATTCTGGACCA 59.987 40.000 4.93 0.00 0.00 4.02
4344 8270 7.177878 ACCATCAGAAACAGATTGTATTTCCT 58.822 34.615 0.00 0.00 33.64 3.36
4346 8272 8.186821 CCATCAGAAACAGATTGTATTTCCTTC 58.813 37.037 0.00 0.00 33.64 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.851008 GCGATTTAATGAAGAGGCGTGC 60.851 50.000 0.00 0.00 0.00 5.34
3 4 2.609459 AGCGATTTAATGAAGAGGCGTG 59.391 45.455 0.00 0.00 0.00 5.34
5 6 5.597813 ATTAGCGATTTAATGAAGAGGCG 57.402 39.130 0.00 0.00 0.00 5.52
13 14 6.404734 GGGCCTTCCATATTAGCGATTTAATG 60.405 42.308 0.84 0.00 35.00 1.90
14 15 5.652452 GGGCCTTCCATATTAGCGATTTAAT 59.348 40.000 0.84 0.00 35.00 1.40
43 44 2.992164 GCCAAAATGCTGGGCCAT 59.008 55.556 6.72 0.00 41.90 4.40
57 58 2.178580 CTGGGCCTAAATTTTGAGCCA 58.821 47.619 22.91 13.76 45.72 4.75
62 63 1.476488 CGGTCCTGGGCCTAAATTTTG 59.524 52.381 16.65 0.00 0.00 2.44
82 83 3.901797 CTGACCTTGTCCACGGGCC 62.902 68.421 0.00 0.00 0.00 5.80
120 121 5.074746 TCTCCAGTATACCTAGCCATGAA 57.925 43.478 0.00 0.00 0.00 2.57
121 122 4.741928 TCTCCAGTATACCTAGCCATGA 57.258 45.455 0.00 0.00 0.00 3.07
128 129 7.257455 CCTCCCTAATCTTCTCCAGTATACCTA 60.257 44.444 0.00 0.00 0.00 3.08
137 138 3.116939 CCTCTCCTCCCTAATCTTCTCCA 60.117 52.174 0.00 0.00 0.00 3.86
156 157 0.329596 ATTTCAGCTGGTGGGACCTC 59.670 55.000 15.13 0.00 39.58 3.85
177 178 1.896660 CTGACCAACCAACACCCCG 60.897 63.158 0.00 0.00 0.00 5.73
230 244 1.302511 ACAGGCGCTGACCGAAAAT 60.303 52.632 7.64 0.00 40.02 1.82
235 249 4.969196 ACACACAGGCGCTGACCG 62.969 66.667 7.64 0.00 40.75 4.79
246 260 2.596862 CGCTTATTTCGATCGACACACA 59.403 45.455 19.26 0.00 0.00 3.72
253 267 1.326245 TGCAACCGCTTATTTCGATCG 59.674 47.619 9.36 9.36 39.64 3.69
266 280 1.097547 GGGTCTGGATGATGCAACCG 61.098 60.000 10.37 0.00 0.00 4.44
274 288 2.376063 CCACACAGGGTCTGGATGA 58.624 57.895 0.00 0.00 35.51 2.92
372 386 1.877443 GCAACCTCGTTGTACAACCAT 59.123 47.619 28.43 11.88 44.40 3.55
376 390 1.210870 GTCGCAACCTCGTTGTACAA 58.789 50.000 3.59 3.59 44.40 2.41
412 426 0.949397 CAACCATCATCTCGCATGGG 59.051 55.000 2.76 2.76 43.59 4.00
479 493 8.473358 AGGTGTGTTTTACTTAGGCTAAAAAT 57.527 30.769 8.54 0.00 0.00 1.82
498 513 8.897872 ACCTCGGTATTAAAATATAAGGTGTG 57.102 34.615 10.44 0.00 32.95 3.82
576 592 6.431234 GTGGAGCATCGGGAAAATAAGAATAT 59.569 38.462 0.00 0.00 34.37 1.28
577 593 5.763204 GTGGAGCATCGGGAAAATAAGAATA 59.237 40.000 0.00 0.00 34.37 1.75
600 616 6.485648 GTCTTATGTGAACCTTAAACCAGTGT 59.514 38.462 0.00 0.00 0.00 3.55
601 617 6.710744 AGTCTTATGTGAACCTTAAACCAGTG 59.289 38.462 0.00 0.00 0.00 3.66
689 719 8.450964 CAAAAGAACTACATCAATTCATACGGT 58.549 33.333 0.00 0.00 0.00 4.83
702 732 5.183904 GCCAGTCCATTCAAAAGAACTACAT 59.816 40.000 0.00 0.00 0.00 2.29
732 762 4.373116 TCGTGCTCCTCGGGCAAC 62.373 66.667 0.00 0.00 41.54 4.17
906 936 3.938963 CAGATTAGCCGCACTCCTAAAAA 59.061 43.478 0.00 0.00 0.00 1.94
910 940 0.389391 GCAGATTAGCCGCACTCCTA 59.611 55.000 0.00 0.00 0.00 2.94
911 941 1.144936 GCAGATTAGCCGCACTCCT 59.855 57.895 0.00 0.00 0.00 3.69
912 942 0.533755 ATGCAGATTAGCCGCACTCC 60.534 55.000 0.00 0.00 38.73 3.85
913 943 0.864455 GATGCAGATTAGCCGCACTC 59.136 55.000 0.00 0.00 38.73 3.51
915 945 1.835483 CGGATGCAGATTAGCCGCAC 61.835 60.000 0.00 0.00 40.42 5.34
916 946 1.595109 CGGATGCAGATTAGCCGCA 60.595 57.895 0.00 0.00 40.42 5.69
917 947 2.320587 CCGGATGCAGATTAGCCGC 61.321 63.158 0.00 0.00 45.11 6.53
918 948 1.669115 CCCGGATGCAGATTAGCCG 60.669 63.158 0.73 0.00 45.96 5.52
919 949 1.968540 GCCCGGATGCAGATTAGCC 60.969 63.158 0.73 0.00 0.00 3.93
920 950 0.952984 GAGCCCGGATGCAGATTAGC 60.953 60.000 0.73 0.00 0.00 3.09
921 951 0.394192 TGAGCCCGGATGCAGATTAG 59.606 55.000 0.73 0.00 0.00 1.73
923 953 0.250640 GATGAGCCCGGATGCAGATT 60.251 55.000 0.73 0.00 0.00 2.40
925 955 1.763655 AGATGAGCCCGGATGCAGA 60.764 57.895 0.73 0.00 0.00 4.26
926 956 1.597302 CAGATGAGCCCGGATGCAG 60.597 63.158 0.73 0.00 0.00 4.41
927 957 2.507452 CAGATGAGCCCGGATGCA 59.493 61.111 0.73 0.00 0.00 3.96
929 959 1.890979 GTGCAGATGAGCCCGGATG 60.891 63.158 0.73 0.00 0.00 3.51
930 960 2.507944 GTGCAGATGAGCCCGGAT 59.492 61.111 0.73 0.00 0.00 4.18
931 961 3.785859 GGTGCAGATGAGCCCGGA 61.786 66.667 0.73 0.00 0.00 5.14
932 962 4.864334 GGGTGCAGATGAGCCCGG 62.864 72.222 0.00 0.00 0.00 5.73
933 963 4.100084 TGGGTGCAGATGAGCCCG 62.100 66.667 3.57 0.00 43.89 6.13
935 965 2.821366 CGTGGGTGCAGATGAGCC 60.821 66.667 0.00 0.00 0.00 4.70
937 967 0.108186 TAAGCGTGGGTGCAGATGAG 60.108 55.000 0.00 0.00 37.31 2.90
938 968 0.108186 CTAAGCGTGGGTGCAGATGA 60.108 55.000 0.00 0.00 37.31 2.92
940 970 0.613260 TTCTAAGCGTGGGTGCAGAT 59.387 50.000 0.00 0.00 37.31 2.90
941 971 0.394938 TTTCTAAGCGTGGGTGCAGA 59.605 50.000 0.00 0.00 37.31 4.26
942 972 1.234821 TTTTCTAAGCGTGGGTGCAG 58.765 50.000 0.00 0.00 37.31 4.41
1005 1035 7.364200 CGTCAAATTATCTACCACCACAAAAA 58.636 34.615 0.00 0.00 0.00 1.94
1008 1038 4.393680 GCGTCAAATTATCTACCACCACAA 59.606 41.667 0.00 0.00 0.00 3.33
1009 1039 3.936453 GCGTCAAATTATCTACCACCACA 59.064 43.478 0.00 0.00 0.00 4.17
1010 1040 3.000925 CGCGTCAAATTATCTACCACCAC 59.999 47.826 0.00 0.00 0.00 4.16
1012 1042 3.000925 CACGCGTCAAATTATCTACCACC 59.999 47.826 9.86 0.00 0.00 4.61
1013 1043 3.861113 TCACGCGTCAAATTATCTACCAC 59.139 43.478 9.86 0.00 0.00 4.16
1015 1045 3.489785 CCTCACGCGTCAAATTATCTACC 59.510 47.826 9.86 0.00 0.00 3.18
1016 1046 4.026804 CACCTCACGCGTCAAATTATCTAC 60.027 45.833 9.86 0.00 0.00 2.59
1017 1047 4.109766 CACCTCACGCGTCAAATTATCTA 58.890 43.478 9.86 0.00 0.00 1.98
1019 1049 2.536928 GCACCTCACGCGTCAAATTATC 60.537 50.000 9.86 0.00 0.00 1.75
1021 1051 0.793861 GCACCTCACGCGTCAAATTA 59.206 50.000 9.86 0.00 0.00 1.40
1022 1052 1.574428 GCACCTCACGCGTCAAATT 59.426 52.632 9.86 0.00 0.00 1.82
1023 1053 3.253955 GCACCTCACGCGTCAAAT 58.746 55.556 9.86 0.00 0.00 2.32
1034 1064 1.215382 GATTTTTGGGGCGCACCTC 59.785 57.895 32.18 15.41 40.03 3.85
1036 1066 1.079888 CTGATTTTTGGGGCGCACC 60.080 57.895 25.59 25.59 39.11 5.01
1037 1067 1.737735 GCTGATTTTTGGGGCGCAC 60.738 57.895 10.83 4.83 0.00 5.34
1038 1068 1.876497 GAGCTGATTTTTGGGGCGCA 61.876 55.000 10.83 0.00 0.00 6.09
1040 1070 0.819582 ATGAGCTGATTTTTGGGGCG 59.180 50.000 0.00 0.00 0.00 6.13
1055 1085 2.032302 GCTGCTCAGATGCTCAAATGAG 59.968 50.000 6.05 6.05 44.75 2.90
1056 1086 2.014857 GCTGCTCAGATGCTCAAATGA 58.985 47.619 0.29 0.00 0.00 2.57
1058 1088 2.421751 AGCTGCTCAGATGCTCAAAT 57.578 45.000 0.00 0.00 30.41 2.32
1059 1089 3.950869 AGCTGCTCAGATGCTCAAA 57.049 47.368 0.00 0.00 30.41 2.69
1063 1093 1.438399 CGAGAGCTGCTCAGATGCT 59.562 57.895 29.49 9.44 44.15 3.79
1064 1094 1.592131 CCGAGAGCTGCTCAGATGC 60.592 63.158 29.49 12.92 44.15 3.91
1065 1095 1.592131 GCCGAGAGCTGCTCAGATG 60.592 63.158 29.49 16.14 44.15 2.90
1066 1096 1.611474 TTGCCGAGAGCTGCTCAGAT 61.611 55.000 29.49 10.97 44.15 2.90
1067 1097 1.820010 TTTGCCGAGAGCTGCTCAGA 61.820 55.000 29.49 7.15 44.15 3.27
1068 1098 0.952497 TTTTGCCGAGAGCTGCTCAG 60.952 55.000 29.49 21.79 44.15 3.35
1070 1100 2.247790 TTTTTGCCGAGAGCTGCTC 58.752 52.632 21.72 21.72 44.23 4.26
1071 1101 4.481195 TTTTTGCCGAGAGCTGCT 57.519 50.000 0.00 0.00 44.23 4.24
1090 1277 7.433680 ACATTTTTACAGACCCTGATTTTGTC 58.566 34.615 0.45 0.00 35.18 3.18
1094 1281 9.143155 AGTAAACATTTTTACAGACCCTGATTT 57.857 29.630 15.08 0.00 46.66 2.17
1097 1284 7.057894 ACAGTAAACATTTTTACAGACCCTGA 58.942 34.615 15.08 0.00 46.66 3.86
1098 1285 7.272037 ACAGTAAACATTTTTACAGACCCTG 57.728 36.000 15.08 7.23 46.66 4.45
1099 1286 7.558444 TGAACAGTAAACATTTTTACAGACCCT 59.442 33.333 15.08 0.00 46.66 4.34
1101 1288 7.375017 CGTGAACAGTAAACATTTTTACAGACC 59.625 37.037 15.08 6.74 46.66 3.85
1104 1291 6.689241 TGCGTGAACAGTAAACATTTTTACAG 59.311 34.615 15.08 10.35 46.66 2.74
1106 1293 6.689669 AGTGCGTGAACAGTAAACATTTTTAC 59.310 34.615 6.41 6.41 45.22 2.01
1109 1296 5.034152 CAGTGCGTGAACAGTAAACATTTT 58.966 37.500 0.00 0.00 0.00 1.82
1110 1297 4.095782 ACAGTGCGTGAACAGTAAACATTT 59.904 37.500 0.00 0.00 0.00 2.32
1111 1298 3.625764 ACAGTGCGTGAACAGTAAACATT 59.374 39.130 0.00 0.00 0.00 2.71
1112 1299 3.202906 ACAGTGCGTGAACAGTAAACAT 58.797 40.909 0.00 0.00 0.00 2.71
1114 1301 3.668596 AACAGTGCGTGAACAGTAAAC 57.331 42.857 0.00 0.00 0.00 2.01
1115 1302 4.154375 TCAAAACAGTGCGTGAACAGTAAA 59.846 37.500 0.00 0.00 0.00 2.01
1117 1304 3.062909 GTCAAAACAGTGCGTGAACAGTA 59.937 43.478 0.00 0.00 0.00 2.74
1119 1306 2.440501 GTCAAAACAGTGCGTGAACAG 58.559 47.619 0.00 0.00 0.00 3.16
1120 1307 1.131504 GGTCAAAACAGTGCGTGAACA 59.868 47.619 2.35 0.00 0.00 3.18
1121 1308 1.533129 GGGTCAAAACAGTGCGTGAAC 60.533 52.381 0.00 0.00 0.00 3.18
1122 1309 0.736053 GGGTCAAAACAGTGCGTGAA 59.264 50.000 0.00 0.00 0.00 3.18
1123 1310 0.393132 TGGGTCAAAACAGTGCGTGA 60.393 50.000 0.00 0.00 0.00 4.35
1124 1311 0.453793 TTGGGTCAAAACAGTGCGTG 59.546 50.000 0.00 0.00 0.00 5.34
1125 1312 1.398692 ATTGGGTCAAAACAGTGCGT 58.601 45.000 0.00 0.00 0.00 5.24
1126 1313 2.507339 AATTGGGTCAAAACAGTGCG 57.493 45.000 0.00 0.00 0.00 5.34
1127 1314 5.783111 AGATAAATTGGGTCAAAACAGTGC 58.217 37.500 0.00 0.00 0.00 4.40
1128 1315 8.661352 AAAAGATAAATTGGGTCAAAACAGTG 57.339 30.769 0.00 0.00 0.00 3.66
1153 1588 0.952497 CTGAGCAGCTCTCGGCAAAA 60.952 55.000 23.15 0.00 44.86 2.44
1154 1589 1.375140 CTGAGCAGCTCTCGGCAAA 60.375 57.895 23.15 0.00 44.86 3.68
1157 1592 1.592131 CATCTGAGCAGCTCTCGGC 60.592 63.158 23.15 0.00 45.76 5.54
1162 1597 2.105006 TTTGGACATCTGAGCAGCTC 57.895 50.000 16.21 16.21 0.00 4.09
1165 1600 5.645067 TCAACTAATTTGGACATCTGAGCAG 59.355 40.000 0.00 0.00 35.69 4.24
1166 1601 5.559770 TCAACTAATTTGGACATCTGAGCA 58.440 37.500 0.00 0.00 35.69 4.26
1169 1604 9.695526 CAAAATTCAACTAATTTGGACATCTGA 57.304 29.630 0.00 0.00 45.12 3.27
1171 1606 8.096414 CCCAAAATTCAACTAATTTGGACATCT 58.904 33.333 15.65 0.00 45.12 2.90
1172 1607 7.334171 CCCCAAAATTCAACTAATTTGGACATC 59.666 37.037 15.65 0.00 45.12 3.06
1173 1608 7.167535 CCCCAAAATTCAACTAATTTGGACAT 58.832 34.615 15.65 0.00 45.12 3.06
1174 1609 6.529220 CCCCAAAATTCAACTAATTTGGACA 58.471 36.000 15.65 0.00 45.12 4.02
1177 1612 4.391523 CGCCCCAAAATTCAACTAATTTGG 59.608 41.667 8.74 8.74 45.12 3.28
1180 1615 3.007398 TGCGCCCCAAAATTCAACTAATT 59.993 39.130 4.18 0.00 39.56 1.40
1181 1616 2.564947 TGCGCCCCAAAATTCAACTAAT 59.435 40.909 4.18 0.00 0.00 1.73
1183 1618 1.271102 GTGCGCCCCAAAATTCAACTA 59.729 47.619 4.18 0.00 0.00 2.24
1184 1619 0.033366 GTGCGCCCCAAAATTCAACT 59.967 50.000 4.18 0.00 0.00 3.16
1185 1620 1.281566 CGTGCGCCCCAAAATTCAAC 61.282 55.000 4.18 0.00 0.00 3.18
1186 1621 1.006805 CGTGCGCCCCAAAATTCAA 60.007 52.632 4.18 0.00 0.00 2.69
1187 1622 2.136196 GACGTGCGCCCCAAAATTCA 62.136 55.000 4.18 0.00 0.00 2.57
1188 1623 1.443702 GACGTGCGCCCCAAAATTC 60.444 57.895 4.18 0.00 0.00 2.17
1190 1625 2.596046 TGACGTGCGCCCCAAAAT 60.596 55.556 4.18 0.00 0.00 1.82
1191 1626 3.587933 GTGACGTGCGCCCCAAAA 61.588 61.111 4.18 0.00 0.00 2.44
1204 1639 3.861113 TGGTAGATAATTTGACGCGTGAC 59.139 43.478 20.70 2.93 0.00 3.67
1210 1645 6.489127 TTTGTGGTGGTAGATAATTTGACG 57.511 37.500 0.00 0.00 0.00 4.35
1282 1802 0.390124 CTCATCTGCTCCCTCTCAGC 59.610 60.000 0.00 0.00 37.40 4.26
1283 1803 1.682854 GACTCATCTGCTCCCTCTCAG 59.317 57.143 0.00 0.00 0.00 3.35
1285 1805 1.039856 GGACTCATCTGCTCCCTCTC 58.960 60.000 0.00 0.00 0.00 3.20
1286 1806 0.754957 CGGACTCATCTGCTCCCTCT 60.755 60.000 0.00 0.00 0.00 3.69
1287 1807 1.739049 CGGACTCATCTGCTCCCTC 59.261 63.158 0.00 0.00 0.00 4.30
1289 1809 2.801631 CCCGGACTCATCTGCTCCC 61.802 68.421 0.73 0.00 0.00 4.30
1290 1810 2.818132 CCCGGACTCATCTGCTCC 59.182 66.667 0.73 0.00 0.00 4.70
1292 1812 2.685017 TGCCCGGACTCATCTGCT 60.685 61.111 0.73 0.00 0.00 4.24
1293 1813 2.512515 GTGCCCGGACTCATCTGC 60.513 66.667 0.73 0.00 0.00 4.26
1294 1814 2.187946 GGTGCCCGGACTCATCTG 59.812 66.667 0.73 0.00 0.00 2.90
1295 1815 3.461773 CGGTGCCCGGACTCATCT 61.462 66.667 0.73 0.00 44.15 2.90
1306 1826 1.407618 AGGAAAACTCAAAACGGTGCC 59.592 47.619 0.00 0.00 0.00 5.01
1307 1827 2.863401 AGGAAAACTCAAAACGGTGC 57.137 45.000 0.00 0.00 0.00 5.01
1393 2051 2.569354 GGACAACGCAAATGGGCCA 61.569 57.895 9.61 9.61 0.00 5.36
1406 2064 3.706055 AGCTTTCGCTGAAGGACAA 57.294 47.368 4.98 0.00 46.86 3.18
1492 2151 3.129502 CACTGCCATGGCCGACAG 61.130 66.667 33.44 25.00 41.09 3.51
1588 2279 0.806868 GACGTCCATGAGACCACGTA 59.193 55.000 3.51 0.00 45.14 3.57
1665 2356 3.883549 GGGGAGGAGAGCATGGCC 61.884 72.222 0.00 0.00 0.00 5.36
1721 2412 3.239253 AGGCGGAAAGGACGGTGT 61.239 61.111 0.00 0.00 0.00 4.16
1919 2611 2.238646 GGTGATCATGGTGTTGGAGGTA 59.761 50.000 0.00 0.00 0.00 3.08
1924 2616 1.656818 GCCGGTGATCATGGTGTTGG 61.657 60.000 15.86 5.08 0.00 3.77
2037 2730 2.435938 GGCGCCCGTTCTTGATGA 60.436 61.111 18.11 0.00 0.00 2.92
2039 2732 2.746277 GTGGCGCCCGTTCTTGAT 60.746 61.111 26.77 0.00 0.00 2.57
2061 2754 1.123077 ATGGAAGCAGTAGATCGCCA 58.877 50.000 0.00 0.00 0.00 5.69
2240 2933 3.081133 GCACCGAGCGTACATGTG 58.919 61.111 9.11 0.00 0.00 3.21
2368 3061 2.971660 TCGCCTCAAAATGGTCGATA 57.028 45.000 0.00 0.00 31.84 2.92
2374 3067 1.064621 CCGCATCGCCTCAAAATGG 59.935 57.895 0.00 0.00 0.00 3.16
2404 3097 3.259902 GAAGGTCACCGTATCTGGTTTC 58.740 50.000 0.00 0.00 41.38 2.78
2407 3100 1.549170 GTGAAGGTCACCGTATCTGGT 59.451 52.381 0.00 0.00 41.37 4.00
2413 3106 2.934570 GCCCGTGAAGGTCACCGTA 61.935 63.158 2.91 0.00 44.20 4.02
2414 3107 4.309950 GCCCGTGAAGGTCACCGT 62.310 66.667 2.91 0.00 44.20 4.83
2416 3109 4.309950 ACGCCCGTGAAGGTCACC 62.310 66.667 2.91 0.00 44.20 4.02
2422 3115 1.811266 CATGAGGACGCCCGTGAAG 60.811 63.158 0.00 0.00 37.58 3.02
2461 3154 3.827898 CTCAGCCCCTCGTCCGTC 61.828 72.222 0.00 0.00 0.00 4.79
2503 3196 2.742372 GTGATGCCGTGTTCCGCT 60.742 61.111 0.00 0.00 34.38 5.52
2504 3197 3.027170 CTGTGATGCCGTGTTCCGC 62.027 63.158 0.00 0.00 34.38 5.54
2505 3198 3.027170 GCTGTGATGCCGTGTTCCG 62.027 63.158 0.00 0.00 0.00 4.30
2506 3199 1.514678 TTGCTGTGATGCCGTGTTCC 61.515 55.000 0.00 0.00 0.00 3.62
2507 3200 0.110056 CTTGCTGTGATGCCGTGTTC 60.110 55.000 0.00 0.00 0.00 3.18
2508 3201 1.518056 CCTTGCTGTGATGCCGTGTT 61.518 55.000 0.00 0.00 0.00 3.32
2509 3202 1.968017 CCTTGCTGTGATGCCGTGT 60.968 57.895 0.00 0.00 0.00 4.49
2766 3459 2.603008 CGCCATCCCATTTCCCCT 59.397 61.111 0.00 0.00 0.00 4.79
2803 3496 2.184088 TCACTCCCCGGGATTTCATA 57.816 50.000 26.32 0.00 0.00 2.15
2860 3553 1.948834 CAGACAAACTCATGCACACCA 59.051 47.619 0.00 0.00 0.00 4.17
2862 3555 1.661178 CGCAGACAAACTCATGCACAC 60.661 52.381 0.00 0.00 38.60 3.82
2863 3556 0.587768 CGCAGACAAACTCATGCACA 59.412 50.000 0.00 0.00 38.60 4.57
2951 3644 0.612229 CTCACTCACACCTCATGCCT 59.388 55.000 0.00 0.00 0.00 4.75
2961 3654 3.070015 TCAGTCTTCAATGCTCACTCACA 59.930 43.478 0.00 0.00 0.00 3.58
2983 3743 3.073062 ACATGGTGACTACTGAAAGCCTT 59.927 43.478 0.00 0.00 37.60 4.35
3030 3790 0.895100 TGGGCAAGCAAAGCAGTAGG 60.895 55.000 0.00 0.00 0.00 3.18
3172 4674 2.426522 TCTTCACCTTCCAGAAATGCG 58.573 47.619 0.00 0.00 0.00 4.73
3195 5618 4.382040 GCTATCAGTTCAGGAGCTTGTGTA 60.382 45.833 0.00 0.00 0.00 2.90
3285 5709 2.470286 GCGCGCGTAATAGCATCC 59.530 61.111 32.35 6.30 36.85 3.51
3286 5710 2.092148 CGCGCGCGTAATAGCATC 59.908 61.111 42.49 10.04 36.85 3.91
3302 5726 5.425834 CGGAAATCGATCGTTCTAACGCG 62.426 52.174 15.94 3.53 46.05 6.01
3303 5727 2.098021 CGGAAATCGATCGTTCTAACGC 60.098 50.000 15.94 0.00 46.05 4.84
3315 5739 0.456142 CTCACGCTGTCGGAAATCGA 60.456 55.000 0.00 0.00 46.77 3.59
3316 5740 0.732880 ACTCACGCTGTCGGAAATCG 60.733 55.000 0.00 0.00 40.69 3.34
3317 5741 1.429463 AACTCACGCTGTCGGAAATC 58.571 50.000 0.00 0.00 40.69 2.17
3318 5742 1.798813 GAAACTCACGCTGTCGGAAAT 59.201 47.619 0.00 0.00 40.69 2.17
3319 5743 1.214367 GAAACTCACGCTGTCGGAAA 58.786 50.000 0.00 0.00 40.69 3.13
3320 5744 0.599204 GGAAACTCACGCTGTCGGAA 60.599 55.000 0.00 0.00 40.69 4.30
3321 5745 1.006571 GGAAACTCACGCTGTCGGA 60.007 57.895 0.00 0.00 40.69 4.55
3322 5746 0.600255 AAGGAAACTCACGCTGTCGG 60.600 55.000 0.00 0.00 42.68 4.79
3323 5747 0.508641 CAAGGAAACTCACGCTGTCG 59.491 55.000 0.00 0.00 42.68 4.35
3324 5748 1.583054 ACAAGGAAACTCACGCTGTC 58.417 50.000 0.00 0.00 42.68 3.51
3325 5749 2.902705 TACAAGGAAACTCACGCTGT 57.097 45.000 0.00 0.00 42.68 4.40
3326 5750 3.807622 TCTTTACAAGGAAACTCACGCTG 59.192 43.478 0.00 0.00 42.68 5.18
3327 5751 4.067972 TCTTTACAAGGAAACTCACGCT 57.932 40.909 0.00 0.00 42.68 5.07
3328 5752 4.806342 TTCTTTACAAGGAAACTCACGC 57.194 40.909 0.00 0.00 42.68 5.34
3329 5753 6.954944 TGATTTCTTTACAAGGAAACTCACG 58.045 36.000 1.85 0.00 42.68 4.35
3330 5754 7.363431 CCTGATTTCTTTACAAGGAAACTCAC 58.637 38.462 1.85 0.00 42.68 3.51
3331 5755 6.490040 CCCTGATTTCTTTACAAGGAAACTCA 59.510 38.462 1.85 6.50 42.68 3.41
3332 5756 6.490381 ACCCTGATTTCTTTACAAGGAAACTC 59.510 38.462 1.85 3.13 42.68 3.01
3334 5758 6.264518 TCACCCTGATTTCTTTACAAGGAAAC 59.735 38.462 1.85 0.00 34.83 2.78
3335 5759 6.369629 TCACCCTGATTTCTTTACAAGGAAA 58.630 36.000 2.26 2.26 36.17 3.13
3336 5760 5.947663 TCACCCTGATTTCTTTACAAGGAA 58.052 37.500 0.00 0.00 0.00 3.36
3337 5761 5.514834 CCTCACCCTGATTTCTTTACAAGGA 60.515 44.000 0.00 0.00 0.00 3.36
3338 5762 4.702131 CCTCACCCTGATTTCTTTACAAGG 59.298 45.833 0.00 0.00 0.00 3.61
3339 5763 4.156739 GCCTCACCCTGATTTCTTTACAAG 59.843 45.833 0.00 0.00 0.00 3.16
3340 5764 4.079253 GCCTCACCCTGATTTCTTTACAA 58.921 43.478 0.00 0.00 0.00 2.41
3341 5765 3.330701 AGCCTCACCCTGATTTCTTTACA 59.669 43.478 0.00 0.00 0.00 2.41
3342 5766 3.956744 AGCCTCACCCTGATTTCTTTAC 58.043 45.455 0.00 0.00 0.00 2.01
3343 5767 5.772393 TTAGCCTCACCCTGATTTCTTTA 57.228 39.130 0.00 0.00 0.00 1.85
3344 5768 4.657814 TTAGCCTCACCCTGATTTCTTT 57.342 40.909 0.00 0.00 0.00 2.52
3345 5769 4.870021 ATTAGCCTCACCCTGATTTCTT 57.130 40.909 0.00 0.00 0.00 2.52
3346 5770 4.870021 AATTAGCCTCACCCTGATTTCT 57.130 40.909 0.00 0.00 0.00 2.52
3347 5771 6.772716 TGATTAATTAGCCTCACCCTGATTTC 59.227 38.462 0.00 0.00 0.00 2.17
3348 5772 6.672593 TGATTAATTAGCCTCACCCTGATTT 58.327 36.000 0.00 0.00 0.00 2.17
3349 5773 6.266131 TGATTAATTAGCCTCACCCTGATT 57.734 37.500 0.00 0.00 0.00 2.57
3350 5774 5.222007 CCTGATTAATTAGCCTCACCCTGAT 60.222 44.000 1.71 0.00 0.00 2.90
3351 5775 4.103153 CCTGATTAATTAGCCTCACCCTGA 59.897 45.833 1.71 0.00 0.00 3.86
3352 5776 4.392940 CCTGATTAATTAGCCTCACCCTG 58.607 47.826 1.71 0.00 0.00 4.45
3353 5777 3.181439 GCCTGATTAATTAGCCTCACCCT 60.181 47.826 1.71 0.00 0.00 4.34
3354 5778 3.149981 GCCTGATTAATTAGCCTCACCC 58.850 50.000 1.71 0.00 0.00 4.61
3355 5779 3.820557 TGCCTGATTAATTAGCCTCACC 58.179 45.455 1.71 0.00 0.00 4.02
3356 5780 5.123027 GCTATGCCTGATTAATTAGCCTCAC 59.877 44.000 1.71 0.00 0.00 3.51
3357 5781 5.248640 GCTATGCCTGATTAATTAGCCTCA 58.751 41.667 1.71 0.83 0.00 3.86
3358 5782 4.331168 CGCTATGCCTGATTAATTAGCCTC 59.669 45.833 1.71 0.00 0.00 4.70
3359 5783 4.256920 CGCTATGCCTGATTAATTAGCCT 58.743 43.478 1.71 0.00 0.00 4.58
3360 5784 3.375299 CCGCTATGCCTGATTAATTAGCC 59.625 47.826 1.71 0.00 0.00 3.93
3361 5785 3.375299 CCCGCTATGCCTGATTAATTAGC 59.625 47.826 1.71 3.58 0.00 3.09
3362 5786 3.375299 GCCCGCTATGCCTGATTAATTAG 59.625 47.826 0.25 0.25 0.00 1.73
3363 5787 3.343617 GCCCGCTATGCCTGATTAATTA 58.656 45.455 0.00 0.00 0.00 1.40
3364 5788 2.162681 GCCCGCTATGCCTGATTAATT 58.837 47.619 0.00 0.00 0.00 1.40
3365 5789 1.614317 GGCCCGCTATGCCTGATTAAT 60.614 52.381 0.00 0.00 45.70 1.40
3366 5790 0.250727 GGCCCGCTATGCCTGATTAA 60.251 55.000 0.00 0.00 45.70 1.40
3367 5791 1.374947 GGCCCGCTATGCCTGATTA 59.625 57.895 0.00 0.00 45.70 1.75
3368 5792 2.113986 GGCCCGCTATGCCTGATT 59.886 61.111 0.00 0.00 45.70 2.57
3385 5809 1.075836 TGATTTCAACCGGTGGGGG 59.924 57.895 8.52 0.00 41.60 5.40
3386 5810 1.582610 CGTGATTTCAACCGGTGGGG 61.583 60.000 8.52 0.28 43.62 4.96
3387 5811 1.582610 CCGTGATTTCAACCGGTGGG 61.583 60.000 8.52 3.46 40.11 4.61
3388 5812 1.582610 CCCGTGATTTCAACCGGTGG 61.583 60.000 8.52 4.63 34.77 4.61
3389 5813 1.582610 CCCCGTGATTTCAACCGGTG 61.583 60.000 8.52 2.16 34.77 4.94
3390 5814 1.302993 CCCCGTGATTTCAACCGGT 60.303 57.895 0.00 0.00 34.77 5.28
3391 5815 2.696759 GCCCCGTGATTTCAACCGG 61.697 63.158 0.00 0.00 35.88 5.28
3392 5816 1.922135 CTGCCCCGTGATTTCAACCG 61.922 60.000 0.00 0.00 0.00 4.44
3393 5817 0.608035 TCTGCCCCGTGATTTCAACC 60.608 55.000 0.00 0.00 0.00 3.77
3394 5818 0.804989 CTCTGCCCCGTGATTTCAAC 59.195 55.000 0.00 0.00 0.00 3.18
3395 5819 0.400213 ACTCTGCCCCGTGATTTCAA 59.600 50.000 0.00 0.00 0.00 2.69
3396 5820 0.400213 AACTCTGCCCCGTGATTTCA 59.600 50.000 0.00 0.00 0.00 2.69
3397 5821 1.534729 AAACTCTGCCCCGTGATTTC 58.465 50.000 0.00 0.00 0.00 2.17
3398 5822 1.995376 AAAACTCTGCCCCGTGATTT 58.005 45.000 0.00 0.00 0.00 2.17
3399 5823 2.871096 TAAAACTCTGCCCCGTGATT 57.129 45.000 0.00 0.00 0.00 2.57
3400 5824 4.706842 ATATAAAACTCTGCCCCGTGAT 57.293 40.909 0.00 0.00 0.00 3.06
3401 5825 5.512404 CCATATATAAAACTCTGCCCCGTGA 60.512 44.000 0.00 0.00 0.00 4.35
3402 5826 4.695455 CCATATATAAAACTCTGCCCCGTG 59.305 45.833 0.00 0.00 0.00 4.94
3403 5827 4.595781 TCCATATATAAAACTCTGCCCCGT 59.404 41.667 0.00 0.00 0.00 5.28
3404 5828 5.160607 TCCATATATAAAACTCTGCCCCG 57.839 43.478 0.00 0.00 0.00 5.73
3405 5829 5.946377 CCTTCCATATATAAAACTCTGCCCC 59.054 44.000 0.00 0.00 0.00 5.80
3406 5830 6.779860 TCCTTCCATATATAAAACTCTGCCC 58.220 40.000 0.00 0.00 0.00 5.36
3407 5831 7.604545 GTCTCCTTCCATATATAAAACTCTGCC 59.395 40.741 0.00 0.00 0.00 4.85
3408 5832 8.150945 TGTCTCCTTCCATATATAAAACTCTGC 58.849 37.037 0.00 0.00 0.00 4.26
3409 5833 9.482627 GTGTCTCCTTCCATATATAAAACTCTG 57.517 37.037 0.00 0.00 0.00 3.35
3410 5834 9.440761 AGTGTCTCCTTCCATATATAAAACTCT 57.559 33.333 0.00 0.00 0.00 3.24
3413 5837 9.930693 CCTAGTGTCTCCTTCCATATATAAAAC 57.069 37.037 0.00 0.00 0.00 2.43
3414 5838 8.594550 GCCTAGTGTCTCCTTCCATATATAAAA 58.405 37.037 0.00 0.00 0.00 1.52
3415 5839 7.180408 GGCCTAGTGTCTCCTTCCATATATAAA 59.820 40.741 0.00 0.00 0.00 1.40
3416 5840 6.668283 GGCCTAGTGTCTCCTTCCATATATAA 59.332 42.308 0.00 0.00 0.00 0.98
3417 5841 6.195700 GGCCTAGTGTCTCCTTCCATATATA 58.804 44.000 0.00 0.00 0.00 0.86
3418 5842 5.026790 GGCCTAGTGTCTCCTTCCATATAT 58.973 45.833 0.00 0.00 0.00 0.86
3419 5843 4.417437 GGCCTAGTGTCTCCTTCCATATA 58.583 47.826 0.00 0.00 0.00 0.86
3420 5844 3.243724 GGCCTAGTGTCTCCTTCCATAT 58.756 50.000 0.00 0.00 0.00 1.78
3421 5845 2.679082 GGCCTAGTGTCTCCTTCCATA 58.321 52.381 0.00 0.00 0.00 2.74
3422 5846 1.501582 GGCCTAGTGTCTCCTTCCAT 58.498 55.000 0.00 0.00 0.00 3.41
3423 5847 0.617820 GGGCCTAGTGTCTCCTTCCA 60.618 60.000 0.84 0.00 0.00 3.53
3424 5848 1.338890 GGGGCCTAGTGTCTCCTTCC 61.339 65.000 0.84 0.00 0.00 3.46
3425 5849 0.617820 TGGGGCCTAGTGTCTCCTTC 60.618 60.000 0.84 0.00 0.00 3.46
3426 5850 0.910088 GTGGGGCCTAGTGTCTCCTT 60.910 60.000 0.84 0.00 0.00 3.36
3427 5851 1.306226 GTGGGGCCTAGTGTCTCCT 60.306 63.158 0.84 0.00 0.00 3.69
3428 5852 0.032416 TAGTGGGGCCTAGTGTCTCC 60.032 60.000 7.61 0.00 0.00 3.71
3429 5853 2.089600 ATAGTGGGGCCTAGTGTCTC 57.910 55.000 7.61 0.00 0.00 3.36
3430 5854 2.119495 CAATAGTGGGGCCTAGTGTCT 58.881 52.381 7.61 0.00 30.47 3.41
3431 5855 2.116238 TCAATAGTGGGGCCTAGTGTC 58.884 52.381 7.61 0.00 35.21 3.67
3432 5856 2.263895 TCAATAGTGGGGCCTAGTGT 57.736 50.000 7.61 0.00 35.21 3.55
3433 5857 3.644966 TTTCAATAGTGGGGCCTAGTG 57.355 47.619 7.61 0.00 35.03 2.74
3434 5858 3.785887 TGATTTCAATAGTGGGGCCTAGT 59.214 43.478 0.84 1.96 0.00 2.57
3435 5859 4.137543 GTGATTTCAATAGTGGGGCCTAG 58.862 47.826 0.84 0.00 0.00 3.02
3436 5860 3.433031 CGTGATTTCAATAGTGGGGCCTA 60.433 47.826 0.84 0.00 0.00 3.93
3437 5861 2.683742 CGTGATTTCAATAGTGGGGCCT 60.684 50.000 0.84 0.00 0.00 5.19
3438 5862 1.676006 CGTGATTTCAATAGTGGGGCC 59.324 52.381 0.00 0.00 0.00 5.80
3439 5863 1.676006 CCGTGATTTCAATAGTGGGGC 59.324 52.381 0.00 0.00 0.00 5.80
3440 5864 2.297701 CCCGTGATTTCAATAGTGGGG 58.702 52.381 0.00 0.00 0.00 4.96
3441 5865 2.297701 CCCCGTGATTTCAATAGTGGG 58.702 52.381 0.00 0.00 35.11 4.61
3442 5866 1.676006 GCCCCGTGATTTCAATAGTGG 59.324 52.381 0.00 0.00 0.00 4.00
3443 5867 2.355756 CTGCCCCGTGATTTCAATAGTG 59.644 50.000 0.00 0.00 0.00 2.74
3444 5868 2.238646 TCTGCCCCGTGATTTCAATAGT 59.761 45.455 0.00 0.00 0.00 2.12
3445 5869 2.874701 CTCTGCCCCGTGATTTCAATAG 59.125 50.000 0.00 0.00 0.00 1.73
3446 5870 2.238646 ACTCTGCCCCGTGATTTCAATA 59.761 45.455 0.00 0.00 0.00 1.90
3447 5871 1.004745 ACTCTGCCCCGTGATTTCAAT 59.995 47.619 0.00 0.00 0.00 2.57
3448 5872 0.400213 ACTCTGCCCCGTGATTTCAA 59.600 50.000 0.00 0.00 0.00 2.69
3449 5873 0.400213 AACTCTGCCCCGTGATTTCA 59.600 50.000 0.00 0.00 0.00 2.69
3450 5874 1.534729 AAACTCTGCCCCGTGATTTC 58.465 50.000 0.00 0.00 0.00 2.17
3451 5875 1.995376 AAAACTCTGCCCCGTGATTT 58.005 45.000 0.00 0.00 0.00 2.17
3452 5876 2.871096 TAAAACTCTGCCCCGTGATT 57.129 45.000 0.00 0.00 0.00 2.57
3453 5877 2.643551 CATAAAACTCTGCCCCGTGAT 58.356 47.619 0.00 0.00 0.00 3.06
3454 5878 1.339631 CCATAAAACTCTGCCCCGTGA 60.340 52.381 0.00 0.00 0.00 4.35
3455 5879 1.094785 CCATAAAACTCTGCCCCGTG 58.905 55.000 0.00 0.00 0.00 4.94
3456 5880 0.988832 TCCATAAAACTCTGCCCCGT 59.011 50.000 0.00 0.00 0.00 5.28
3457 5881 1.949525 CATCCATAAAACTCTGCCCCG 59.050 52.381 0.00 0.00 0.00 5.73
3458 5882 2.310538 CCATCCATAAAACTCTGCCCC 58.689 52.381 0.00 0.00 0.00 5.80
3459 5883 2.952310 GACCATCCATAAAACTCTGCCC 59.048 50.000 0.00 0.00 0.00 5.36
3460 5884 3.629398 CAGACCATCCATAAAACTCTGCC 59.371 47.826 0.00 0.00 0.00 4.85
3461 5885 3.629398 CCAGACCATCCATAAAACTCTGC 59.371 47.826 0.00 0.00 0.00 4.26
3462 5886 4.878397 GTCCAGACCATCCATAAAACTCTG 59.122 45.833 0.00 0.00 0.00 3.35
3463 5887 4.536090 TGTCCAGACCATCCATAAAACTCT 59.464 41.667 0.00 0.00 0.00 3.24
3464 5888 4.843728 TGTCCAGACCATCCATAAAACTC 58.156 43.478 0.00 0.00 0.00 3.01
3465 5889 4.927267 TGTCCAGACCATCCATAAAACT 57.073 40.909 0.00 0.00 0.00 2.66
3466 5890 4.949856 ACATGTCCAGACCATCCATAAAAC 59.050 41.667 0.00 0.00 0.00 2.43
3467 5891 4.949238 CACATGTCCAGACCATCCATAAAA 59.051 41.667 0.00 0.00 0.00 1.52
3468 5892 4.525996 CACATGTCCAGACCATCCATAAA 58.474 43.478 0.00 0.00 0.00 1.40
3469 5893 3.117926 CCACATGTCCAGACCATCCATAA 60.118 47.826 0.00 0.00 0.00 1.90
3470 5894 2.439135 CCACATGTCCAGACCATCCATA 59.561 50.000 0.00 0.00 0.00 2.74
3471 5895 1.213678 CCACATGTCCAGACCATCCAT 59.786 52.381 0.00 0.00 0.00 3.41
3472 5896 0.620030 CCACATGTCCAGACCATCCA 59.380 55.000 0.00 0.00 0.00 3.41
3473 5897 0.107017 CCCACATGTCCAGACCATCC 60.107 60.000 0.00 0.00 0.00 3.51
3474 5898 0.620556 ACCCACATGTCCAGACCATC 59.379 55.000 0.00 0.00 0.00 3.51
3475 5899 0.329261 CACCCACATGTCCAGACCAT 59.671 55.000 0.00 0.00 0.00 3.55
3476 5900 1.760527 CACCCACATGTCCAGACCA 59.239 57.895 0.00 0.00 0.00 4.02
3477 5901 1.002134 CCACCCACATGTCCAGACC 60.002 63.158 0.00 0.00 0.00 3.85
3478 5902 1.002134 CCCACCCACATGTCCAGAC 60.002 63.158 0.00 0.00 0.00 3.51
3479 5903 2.905996 GCCCACCCACATGTCCAGA 61.906 63.158 0.00 0.00 0.00 3.86
3480 5904 2.361610 GCCCACCCACATGTCCAG 60.362 66.667 0.00 0.00 0.00 3.86
3481 5905 3.978193 GGCCCACCCACATGTCCA 61.978 66.667 0.00 0.00 0.00 4.02
3498 5922 4.697756 TGTCGGAAAGGGCGCAGG 62.698 66.667 10.83 0.00 0.00 4.85
3499 5923 3.121030 CTGTCGGAAAGGGCGCAG 61.121 66.667 10.83 0.00 0.00 5.18
3500 5924 3.936203 ACTGTCGGAAAGGGCGCA 61.936 61.111 10.83 0.00 0.00 6.09
3501 5925 3.423154 CACTGTCGGAAAGGGCGC 61.423 66.667 0.00 0.00 0.00 6.53
3502 5926 2.027625 GACACTGTCGGAAAGGGCG 61.028 63.158 0.00 0.00 0.00 6.13
3503 5927 3.967715 GACACTGTCGGAAAGGGC 58.032 61.111 0.00 0.00 0.00 5.19
3512 5936 3.521220 CGCGCGTACGACACTGTC 61.521 66.667 24.19 0.00 43.93 3.51
3513 5937 1.969809 TATCGCGCGTACGACACTGT 61.970 55.000 30.98 6.49 46.28 3.55
3514 5938 1.297085 TATCGCGCGTACGACACTG 60.297 57.895 30.98 3.22 46.28 3.66
3515 5939 1.297158 GTATCGCGCGTACGACACT 60.297 57.895 30.98 7.77 46.28 3.55
3516 5940 2.281664 GGTATCGCGCGTACGACAC 61.282 63.158 30.98 17.59 46.28 3.67
3517 5941 2.023181 GGTATCGCGCGTACGACA 59.977 61.111 30.98 9.80 46.28 4.35
3518 5942 2.723633 GGGTATCGCGCGTACGAC 60.724 66.667 30.98 21.16 46.28 4.34
3520 5944 2.724721 CTGGGTATCGCGCGTACG 60.725 66.667 30.98 11.84 44.07 3.67
3521 5945 2.354305 CCTGGGTATCGCGCGTAC 60.354 66.667 30.98 27.04 0.00 3.67
3522 5946 2.829914 ACCTGGGTATCGCGCGTA 60.830 61.111 30.98 18.14 0.00 4.42
3523 5947 4.203076 GACCTGGGTATCGCGCGT 62.203 66.667 30.98 19.23 0.00 6.01
3525 5949 3.825833 CTCGACCTGGGTATCGCGC 62.826 68.421 0.00 0.00 38.24 6.86
3526 5950 2.331805 CTCGACCTGGGTATCGCG 59.668 66.667 0.00 0.00 38.24 5.87
3527 5951 2.027751 GCTCGACCTGGGTATCGC 59.972 66.667 0.00 0.00 38.24 4.58
3528 5952 2.001361 AACGCTCGACCTGGGTATCG 62.001 60.000 0.00 0.00 39.72 2.92
3529 5953 0.527817 CAACGCTCGACCTGGGTATC 60.528 60.000 0.00 0.00 0.00 2.24
3530 5954 1.515954 CAACGCTCGACCTGGGTAT 59.484 57.895 0.00 0.00 0.00 2.73
3531 5955 2.967397 CAACGCTCGACCTGGGTA 59.033 61.111 0.00 0.00 0.00 3.69
3532 5956 4.681978 GCAACGCTCGACCTGGGT 62.682 66.667 0.00 0.00 0.00 4.51
3534 5958 4.680237 TGGCAACGCTCGACCTGG 62.680 66.667 0.00 0.00 42.51 4.45
3535 5959 3.414700 GTGGCAACGCTCGACCTG 61.415 66.667 0.00 0.00 46.04 4.00
3561 5985 2.583685 GAAAAGACTCATGCGCGGGC 62.584 60.000 18.81 18.81 40.52 6.13
3562 5986 1.425428 GAAAAGACTCATGCGCGGG 59.575 57.895 8.83 0.00 0.00 6.13
3563 5987 1.059369 CGAAAAGACTCATGCGCGG 59.941 57.895 8.83 0.00 0.00 6.46
3564 5988 1.578618 GCGAAAAGACTCATGCGCG 60.579 57.895 0.00 0.00 35.02 6.86
3565 5989 0.247458 GAGCGAAAAGACTCATGCGC 60.247 55.000 0.00 0.00 44.22 6.09
3566 5990 1.070821 TGAGCGAAAAGACTCATGCG 58.929 50.000 0.00 0.00 37.99 4.73
3567 5991 1.129437 GGTGAGCGAAAAGACTCATGC 59.871 52.381 0.00 0.00 44.29 4.06
3568 5992 2.693069 AGGTGAGCGAAAAGACTCATG 58.307 47.619 0.00 0.00 44.29 3.07
3569 5993 3.511934 AGTAGGTGAGCGAAAAGACTCAT 59.488 43.478 0.00 0.00 44.29 2.90
3570 5994 2.891580 AGTAGGTGAGCGAAAAGACTCA 59.108 45.455 0.00 0.00 40.54 3.41
3571 5995 3.579335 AGTAGGTGAGCGAAAAGACTC 57.421 47.619 0.00 0.00 0.00 3.36
3572 5996 3.654414 CAAGTAGGTGAGCGAAAAGACT 58.346 45.455 0.00 0.00 0.00 3.24
3573 5997 2.157863 GCAAGTAGGTGAGCGAAAAGAC 59.842 50.000 0.00 0.00 0.00 3.01
3574 5998 2.037251 AGCAAGTAGGTGAGCGAAAAGA 59.963 45.455 0.00 0.00 0.00 2.52
3575 5999 2.413453 GAGCAAGTAGGTGAGCGAAAAG 59.587 50.000 0.00 0.00 0.00 2.27
3576 6000 2.413837 GAGCAAGTAGGTGAGCGAAAA 58.586 47.619 0.00 0.00 0.00 2.29
3577 6001 1.337823 GGAGCAAGTAGGTGAGCGAAA 60.338 52.381 0.00 0.00 0.00 3.46
3578 6002 0.246635 GGAGCAAGTAGGTGAGCGAA 59.753 55.000 0.00 0.00 0.00 4.70
3579 6003 1.605058 GGGAGCAAGTAGGTGAGCGA 61.605 60.000 0.00 0.00 0.00 4.93
3580 6004 1.153549 GGGAGCAAGTAGGTGAGCG 60.154 63.158 0.00 0.00 0.00 5.03
3581 6005 1.153549 CGGGAGCAAGTAGGTGAGC 60.154 63.158 0.00 0.00 0.00 4.26
3652 6076 7.117523 GGTGAGCACAAGTGAATATATGATCTC 59.882 40.741 4.04 0.00 0.00 2.75
3815 7582 6.687081 TGTTTGGGTGTAACTTTCTAACTG 57.313 37.500 0.00 0.00 36.74 3.16
3978 7768 1.470098 CTCCAAATACAGCTGTGCACC 59.530 52.381 29.57 0.00 0.00 5.01
3982 7772 5.295292 CCATCTTACTCCAAATACAGCTGTG 59.705 44.000 29.57 12.23 0.00 3.66
4006 7796 7.449247 AGCCTCTATAGATGTTTGATCCTTTC 58.551 38.462 2.11 0.00 0.00 2.62
4095 8007 5.187967 AGAGACCAAAGAACCGAAGATACAT 59.812 40.000 0.00 0.00 0.00 2.29
4105 8017 3.493767 ACAAGGAGAGACCAAAGAACC 57.506 47.619 0.00 0.00 42.04 3.62
4121 8033 6.072508 ACTGTACATGCAATTGGAGTAACAAG 60.073 38.462 7.72 9.41 33.23 3.16
4133 8045 8.186163 CAGTTTTCATGATACTGTACATGCAAT 58.814 33.333 21.64 0.00 42.17 3.56
4259 8179 3.101209 CGCATACGCAGCCATGTT 58.899 55.556 4.08 0.00 38.40 2.71
4322 8242 7.978982 CGAAGGAAATACAATCTGTTTCTGAT 58.021 34.615 0.00 0.00 33.51 2.90
4344 8270 2.696707 ACCTGTACAGTTCAGTTCCGAA 59.303 45.455 21.18 0.00 0.00 4.30
4346 8272 2.814280 ACCTGTACAGTTCAGTTCCG 57.186 50.000 21.18 5.39 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.