Multiple sequence alignment - TraesCS6B01G358100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G358100 chr6B 100.000 3467 0 0 1 3467 626459100 626455634 0.000000e+00 6403.0
1 TraesCS6B01G358100 chr6B 93.057 1498 103 1 979 2475 626882474 626883971 0.000000e+00 2189.0
2 TraesCS6B01G358100 chr6B 91.778 1569 116 3 986 2554 626811891 626813446 0.000000e+00 2170.0
3 TraesCS6B01G358100 chr6B 90.746 1502 124 6 969 2458 626590636 626589138 0.000000e+00 1989.0
4 TraesCS6B01G358100 chr6B 88.664 247 26 2 3221 3466 626588167 626587922 2.020000e-77 300.0
5 TraesCS6B01G358100 chr6B 86.463 229 14 2 2908 3119 626588523 626588295 5.780000e-58 235.0
6 TraesCS6B01G358100 chr6B 95.714 140 6 0 2768 2907 626588960 626588821 3.480000e-55 226.0
7 TraesCS6B01G358100 chr6B 89.423 104 11 0 3121 3224 626885684 626885787 7.810000e-27 132.0
8 TraesCS6B01G358100 chr6B 89.474 57 5 1 2587 2643 626884008 626884063 1.730000e-08 71.3
9 TraesCS6B01G358100 chr6B 100.000 30 0 0 3119 3148 626588281 626588252 4.830000e-04 56.5
10 TraesCS6B01G358100 chr6D 92.355 1622 112 2 933 2554 417890692 417892301 0.000000e+00 2298.0
11 TraesCS6B01G358100 chr6D 93.316 1526 96 5 936 2458 417695318 417693796 0.000000e+00 2248.0
12 TraesCS6B01G358100 chr6D 86.833 562 43 9 2686 3224 417693546 417692993 1.780000e-167 599.0
13 TraesCS6B01G358100 chr6D 87.685 406 29 14 271 661 6561759 6562158 1.470000e-123 453.0
14 TraesCS6B01G358100 chr6D 89.783 323 15 3 2815 3119 417893592 417893914 6.970000e-107 398.0
15 TraesCS6B01G358100 chr6D 91.463 246 21 0 3221 3466 417894040 417894285 4.290000e-89 339.0
16 TraesCS6B01G358100 chr6D 93.785 177 11 0 3221 3397 417692966 417692790 2.050000e-67 267.0
17 TraesCS6B01G358100 chr6D 86.897 145 15 4 125 267 417695552 417695410 3.580000e-35 159.0
18 TraesCS6B01G358100 chr6D 86.207 145 16 4 125 267 417890361 417890503 1.670000e-33 154.0
19 TraesCS6B01G358100 chr6D 100.000 30 0 0 3119 3148 417893928 417893957 4.830000e-04 56.5
20 TraesCS6B01G358100 chr6A 91.985 1647 105 1 970 2589 560567649 560569295 0.000000e+00 2285.0
21 TraesCS6B01G358100 chr6A 91.864 971 79 0 1488 2458 560104775 560103805 0.000000e+00 1356.0
22 TraesCS6B01G358100 chr6A 88.113 530 31 13 2711 3224 560103130 560102617 4.950000e-168 601.0
23 TraesCS6B01G358100 chr6A 91.498 247 19 2 3221 3466 560569897 560570142 4.290000e-89 339.0
24 TraesCS6B01G358100 chr6A 94.350 177 10 0 3221 3397 560102590 560102414 4.410000e-69 272.0
25 TraesCS6B01G358100 chr6A 82.258 124 8 4 3010 3119 560569648 560569771 1.020000e-15 95.3
26 TraesCS6B01G358100 chr6A 100.000 30 0 0 3119 3148 560569785 560569814 4.830000e-04 56.5
27 TraesCS6B01G358100 chr1D 87.915 422 30 12 270 673 53679808 53680226 8.710000e-131 477.0
28 TraesCS6B01G358100 chr7D 88.177 406 31 10 270 660 567487982 567488385 5.240000e-128 468.0
29 TraesCS6B01G358100 chr7D 84.783 230 21 8 451 666 588139695 588139466 5.830000e-53 219.0
30 TraesCS6B01G358100 chr5D 86.978 407 42 8 269 666 286194025 286194429 6.830000e-122 448.0
31 TraesCS6B01G358100 chr5D 87.042 409 36 12 271 667 500688452 500688049 2.450000e-121 446.0
32 TraesCS6B01G358100 chr5D 87.977 341 35 6 269 605 510563859 510564197 6.970000e-107 398.0
33 TraesCS6B01G358100 chr5B 87.010 408 36 10 269 662 371386408 371386812 8.830000e-121 444.0
34 TraesCS6B01G358100 chr4A 86.765 408 38 10 269 662 452090863 452091268 1.140000e-119 440.0
35 TraesCS6B01G358100 chr4A 86.506 415 34 13 269 667 433874052 433874460 1.480000e-118 436.0
36 TraesCS6B01G358100 chr1A 85.530 387 49 7 270 651 374686118 374685734 6.970000e-107 398.0
37 TraesCS6B01G358100 chr3B 87.683 341 38 4 269 607 65196451 65196789 9.020000e-106 394.0
38 TraesCS6B01G358100 chr3A 83.498 406 54 12 268 666 545156153 545156552 1.970000e-97 366.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G358100 chr6B 626455634 626459100 3466 True 6403.000000 6403 100.000000 1 3467 1 chr6B.!!$R1 3466
1 TraesCS6B01G358100 chr6B 626811891 626813446 1555 False 2170.000000 2170 91.778000 986 2554 1 chr6B.!!$F1 1568
2 TraesCS6B01G358100 chr6B 626882474 626885787 3313 False 797.433333 2189 90.651333 979 3224 3 chr6B.!!$F2 2245
3 TraesCS6B01G358100 chr6B 626587922 626590636 2714 True 561.300000 1989 92.317400 969 3466 5 chr6B.!!$R2 2497
4 TraesCS6B01G358100 chr6D 417692790 417695552 2762 True 818.250000 2248 90.207750 125 3397 4 chr6D.!!$R1 3272
5 TraesCS6B01G358100 chr6D 417890361 417894285 3924 False 649.100000 2298 91.961600 125 3466 5 chr6D.!!$F2 3341
6 TraesCS6B01G358100 chr6A 560102414 560104775 2361 True 743.000000 1356 91.442333 1488 3397 3 chr6A.!!$R1 1909
7 TraesCS6B01G358100 chr6A 560567649 560570142 2493 False 693.950000 2285 91.435250 970 3466 4 chr6A.!!$F1 2496

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
663 666 0.036010 CGAGAGCACCAAGTTCCCAT 60.036 55.0 0.00 0.0 0.00 4.00 F
723 726 0.179073 ATCACTGGGCGTATGCTGTC 60.179 55.0 6.92 0.0 42.25 3.51 F
2250 2266 0.242555 TGCTGTCGAACATCTACGCA 59.757 50.0 0.00 0.0 0.00 5.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2214 2230 0.386858 GCAGCACGTAGTTCGAGTCA 60.387 55.0 0.0 0.0 41.61 3.41 R
2356 2372 1.026718 CCCCCGCAGACAAACTCATC 61.027 60.0 0.0 0.0 0.00 2.92 R
3315 6367 0.108992 CATGGACGCAAGCAAAGCAT 60.109 50.0 0.0 0.0 45.62 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.956333 GCAAACATAACCTATCACCCCC 59.044 50.000 0.00 0.00 0.00 5.40
22 23 3.626222 GCAAACATAACCTATCACCCCCA 60.626 47.826 0.00 0.00 0.00 4.96
23 24 3.945640 AACATAACCTATCACCCCCAC 57.054 47.619 0.00 0.00 0.00 4.61
24 25 2.853430 ACATAACCTATCACCCCCACA 58.147 47.619 0.00 0.00 0.00 4.17
25 26 3.403322 ACATAACCTATCACCCCCACAT 58.597 45.455 0.00 0.00 0.00 3.21
26 27 3.791545 ACATAACCTATCACCCCCACATT 59.208 43.478 0.00 0.00 0.00 2.71
27 28 4.979039 ACATAACCTATCACCCCCACATTA 59.021 41.667 0.00 0.00 0.00 1.90
28 29 5.073144 ACATAACCTATCACCCCCACATTAG 59.927 44.000 0.00 0.00 0.00 1.73
29 30 1.774856 ACCTATCACCCCCACATTAGC 59.225 52.381 0.00 0.00 0.00 3.09
30 31 1.774254 CCTATCACCCCCACATTAGCA 59.226 52.381 0.00 0.00 0.00 3.49
31 32 2.487265 CCTATCACCCCCACATTAGCAC 60.487 54.545 0.00 0.00 0.00 4.40
32 33 1.298953 ATCACCCCCACATTAGCACT 58.701 50.000 0.00 0.00 0.00 4.40
33 34 1.959710 TCACCCCCACATTAGCACTA 58.040 50.000 0.00 0.00 0.00 2.74
34 35 2.270858 TCACCCCCACATTAGCACTAA 58.729 47.619 0.00 0.00 0.00 2.24
35 36 2.849943 TCACCCCCACATTAGCACTAAT 59.150 45.455 0.00 0.00 36.27 1.73
36 37 4.041464 TCACCCCCACATTAGCACTAATA 58.959 43.478 2.68 0.00 34.27 0.98
37 38 4.102524 TCACCCCCACATTAGCACTAATAG 59.897 45.833 2.68 1.69 34.27 1.73
38 39 4.102524 CACCCCCACATTAGCACTAATAGA 59.897 45.833 2.68 0.00 34.27 1.98
39 40 4.913968 ACCCCCACATTAGCACTAATAGAT 59.086 41.667 2.68 0.00 34.27 1.98
40 41 5.372661 ACCCCCACATTAGCACTAATAGATT 59.627 40.000 2.68 0.00 34.27 2.40
41 42 6.561070 ACCCCCACATTAGCACTAATAGATTA 59.439 38.462 2.68 0.00 34.27 1.75
42 43 6.879458 CCCCCACATTAGCACTAATAGATTAC 59.121 42.308 2.68 0.00 34.27 1.89
43 44 7.256691 CCCCCACATTAGCACTAATAGATTACT 60.257 40.741 2.68 0.00 34.27 2.24
44 45 7.819900 CCCCACATTAGCACTAATAGATTACTC 59.180 40.741 2.68 0.00 34.27 2.59
45 46 7.542477 CCCACATTAGCACTAATAGATTACTCG 59.458 40.741 2.68 0.00 34.27 4.18
46 47 8.297426 CCACATTAGCACTAATAGATTACTCGA 58.703 37.037 2.68 0.00 34.27 4.04
47 48 9.335891 CACATTAGCACTAATAGATTACTCGAG 57.664 37.037 11.84 11.84 34.27 4.04
48 49 8.024285 ACATTAGCACTAATAGATTACTCGAGC 58.976 37.037 13.61 0.00 34.27 5.03
49 50 5.037015 AGCACTAATAGATTACTCGAGCG 57.963 43.478 13.61 0.00 0.00 5.03
50 51 4.755629 AGCACTAATAGATTACTCGAGCGA 59.244 41.667 13.61 0.83 0.00 4.93
51 52 5.238868 AGCACTAATAGATTACTCGAGCGAA 59.761 40.000 13.61 7.64 0.00 4.70
52 53 5.566016 GCACTAATAGATTACTCGAGCGAAG 59.434 44.000 13.61 0.14 0.00 3.79
68 69 1.682323 CGAAGCTACCTCTAACCTCCC 59.318 57.143 0.00 0.00 0.00 4.30
69 70 2.687314 CGAAGCTACCTCTAACCTCCCT 60.687 54.545 0.00 0.00 0.00 4.20
70 71 3.376636 GAAGCTACCTCTAACCTCCCTT 58.623 50.000 0.00 0.00 0.00 3.95
71 72 3.035055 AGCTACCTCTAACCTCCCTTC 57.965 52.381 0.00 0.00 0.00 3.46
72 73 1.682323 GCTACCTCTAACCTCCCTTCG 59.318 57.143 0.00 0.00 0.00 3.79
73 74 1.682323 CTACCTCTAACCTCCCTTCGC 59.318 57.143 0.00 0.00 0.00 4.70
74 75 0.976590 ACCTCTAACCTCCCTTCGCC 60.977 60.000 0.00 0.00 0.00 5.54
75 76 1.437986 CTCTAACCTCCCTTCGCCG 59.562 63.158 0.00 0.00 0.00 6.46
76 77 2.017559 CTCTAACCTCCCTTCGCCGG 62.018 65.000 0.00 0.00 0.00 6.13
77 78 2.284112 TAACCTCCCTTCGCCGGT 60.284 61.111 1.90 0.00 0.00 5.28
78 79 1.896122 CTAACCTCCCTTCGCCGGTT 61.896 60.000 1.90 0.00 42.10 4.44
79 80 0.614415 TAACCTCCCTTCGCCGGTTA 60.614 55.000 1.90 0.00 40.10 2.85
80 81 2.176314 AACCTCCCTTCGCCGGTTAC 62.176 60.000 1.90 0.00 37.94 2.50
81 82 2.202703 CTCCCTTCGCCGGTTACG 60.203 66.667 1.90 0.00 40.55 3.18
82 83 4.440127 TCCCTTCGCCGGTTACGC 62.440 66.667 1.90 0.00 39.22 4.42
83 84 4.446413 CCCTTCGCCGGTTACGCT 62.446 66.667 1.90 0.00 39.22 5.07
84 85 3.186047 CCTTCGCCGGTTACGCTG 61.186 66.667 1.90 0.00 39.22 5.18
85 86 3.849953 CTTCGCCGGTTACGCTGC 61.850 66.667 1.90 0.00 39.22 5.25
92 93 2.735857 GGTTACGCTGCGGTCGTT 60.736 61.111 26.95 7.19 40.89 3.85
93 94 2.468532 GTTACGCTGCGGTCGTTG 59.531 61.111 26.95 0.00 40.89 4.10
94 95 2.027897 TTACGCTGCGGTCGTTGT 59.972 55.556 26.95 5.61 40.89 3.32
95 96 2.304401 TTACGCTGCGGTCGTTGTG 61.304 57.895 26.95 0.00 40.89 3.33
99 100 3.049674 CTGCGGTCGTTGTGCCAT 61.050 61.111 0.00 0.00 0.00 4.40
100 101 3.027170 CTGCGGTCGTTGTGCCATC 62.027 63.158 0.00 0.00 0.00 3.51
101 102 3.799755 GCGGTCGTTGTGCCATCC 61.800 66.667 0.00 0.00 0.00 3.51
102 103 3.124921 CGGTCGTTGTGCCATCCC 61.125 66.667 0.00 0.00 0.00 3.85
103 104 2.351276 GGTCGTTGTGCCATCCCT 59.649 61.111 0.00 0.00 0.00 4.20
104 105 1.600107 GGTCGTTGTGCCATCCCTA 59.400 57.895 0.00 0.00 0.00 3.53
105 106 0.180406 GGTCGTTGTGCCATCCCTAT 59.820 55.000 0.00 0.00 0.00 2.57
106 107 1.583054 GTCGTTGTGCCATCCCTATC 58.417 55.000 0.00 0.00 0.00 2.08
107 108 1.139058 GTCGTTGTGCCATCCCTATCT 59.861 52.381 0.00 0.00 0.00 1.98
108 109 1.412710 TCGTTGTGCCATCCCTATCTC 59.587 52.381 0.00 0.00 0.00 2.75
109 110 1.541233 CGTTGTGCCATCCCTATCTCC 60.541 57.143 0.00 0.00 0.00 3.71
110 111 1.490490 GTTGTGCCATCCCTATCTCCA 59.510 52.381 0.00 0.00 0.00 3.86
111 112 1.427809 TGTGCCATCCCTATCTCCAG 58.572 55.000 0.00 0.00 0.00 3.86
112 113 0.036022 GTGCCATCCCTATCTCCAGC 59.964 60.000 0.00 0.00 0.00 4.85
113 114 1.130054 TGCCATCCCTATCTCCAGCC 61.130 60.000 0.00 0.00 0.00 4.85
114 115 1.978473 CCATCCCTATCTCCAGCCG 59.022 63.158 0.00 0.00 0.00 5.52
115 116 0.833834 CCATCCCTATCTCCAGCCGT 60.834 60.000 0.00 0.00 0.00 5.68
116 117 0.319728 CATCCCTATCTCCAGCCGTG 59.680 60.000 0.00 0.00 0.00 4.94
117 118 0.833834 ATCCCTATCTCCAGCCGTGG 60.834 60.000 0.00 0.00 46.63 4.94
118 119 2.423446 CCTATCTCCAGCCGTGGC 59.577 66.667 1.67 1.67 44.60 5.01
119 120 2.434843 CCTATCTCCAGCCGTGGCA 61.435 63.158 14.29 0.00 44.60 4.92
120 121 1.750930 CTATCTCCAGCCGTGGCAT 59.249 57.895 14.29 0.00 44.60 4.40
121 122 0.107456 CTATCTCCAGCCGTGGCATT 59.893 55.000 14.29 0.00 44.60 3.56
122 123 0.106708 TATCTCCAGCCGTGGCATTC 59.893 55.000 14.29 0.00 44.60 2.67
123 124 2.615227 ATCTCCAGCCGTGGCATTCC 62.615 60.000 14.29 0.00 44.60 3.01
136 137 1.269413 GGCATTCCCATTTCTGCATCG 60.269 52.381 0.00 0.00 36.34 3.84
157 158 1.266786 CGTTGCGTCTCGTCTTCGTT 61.267 55.000 0.00 0.00 38.33 3.85
208 209 5.754406 CCATTTTCATTTGTGAGCAACTTGA 59.246 36.000 0.00 0.00 33.82 3.02
209 210 6.073980 CCATTTTCATTTGTGAGCAACTTGAG 60.074 38.462 0.00 0.00 33.82 3.02
222 224 4.580167 AGCAACTTGAGATAGCAAAACACA 59.420 37.500 0.00 0.00 0.00 3.72
232 234 9.677567 TGAGATAGCAAAACACATTTTAGTTTC 57.322 29.630 0.00 0.00 36.98 2.78
233 235 9.677567 GAGATAGCAAAACACATTTTAGTTTCA 57.322 29.630 0.00 0.00 36.98 2.69
282 285 9.762381 ATGTATTAAGGTGGAAAATACAAAGGA 57.238 29.630 10.21 0.00 44.69 3.36
283 286 9.762381 TGTATTAAGGTGGAAAATACAAAGGAT 57.238 29.630 5.01 0.00 41.00 3.24
287 290 9.589461 TTAAGGTGGAAAATACAAAGGATAACA 57.411 29.630 0.00 0.00 0.00 2.41
288 291 8.664669 AAGGTGGAAAATACAAAGGATAACAT 57.335 30.769 0.00 0.00 0.00 2.71
289 292 8.066612 AGGTGGAAAATACAAAGGATAACATG 57.933 34.615 0.00 0.00 0.00 3.21
290 293 7.124147 AGGTGGAAAATACAAAGGATAACATGG 59.876 37.037 0.00 0.00 0.00 3.66
291 294 7.264947 GTGGAAAATACAAAGGATAACATGGG 58.735 38.462 0.00 0.00 0.00 4.00
292 295 6.957020 TGGAAAATACAAAGGATAACATGGGT 59.043 34.615 0.00 0.00 0.00 4.51
293 296 8.116669 TGGAAAATACAAAGGATAACATGGGTA 58.883 33.333 0.00 0.00 0.00 3.69
294 297 8.410912 GGAAAATACAAAGGATAACATGGGTAC 58.589 37.037 0.00 0.00 0.00 3.34
307 310 2.045340 GGTACCAGCGCACCCAAT 60.045 61.111 11.47 0.00 0.00 3.16
308 311 1.222387 GGTACCAGCGCACCCAATA 59.778 57.895 11.47 0.00 0.00 1.90
309 312 0.179029 GGTACCAGCGCACCCAATAT 60.179 55.000 11.47 0.00 0.00 1.28
310 313 0.944386 GTACCAGCGCACCCAATATG 59.056 55.000 11.47 0.00 0.00 1.78
311 314 0.817634 TACCAGCGCACCCAATATGC 60.818 55.000 11.47 0.00 39.81 3.14
312 315 2.723746 CAGCGCACCCAATATGCC 59.276 61.111 11.47 0.00 40.09 4.40
313 316 2.120282 CAGCGCACCCAATATGCCA 61.120 57.895 11.47 0.00 40.09 4.92
314 317 1.379710 AGCGCACCCAATATGCCAA 60.380 52.632 11.47 0.00 40.09 4.52
315 318 0.969917 AGCGCACCCAATATGCCAAA 60.970 50.000 11.47 0.00 40.09 3.28
316 319 0.108424 GCGCACCCAATATGCCAAAA 60.108 50.000 0.30 0.00 40.09 2.44
317 320 1.674221 GCGCACCCAATATGCCAAAAA 60.674 47.619 0.30 0.00 40.09 1.94
364 367 5.607939 AAAATCCGGAAACTTCTTTTGGT 57.392 34.783 9.01 0.00 0.00 3.67
365 368 6.718522 AAAATCCGGAAACTTCTTTTGGTA 57.281 33.333 9.01 0.00 0.00 3.25
366 369 6.911250 AAATCCGGAAACTTCTTTTGGTAT 57.089 33.333 9.01 0.00 0.00 2.73
367 370 6.510879 AATCCGGAAACTTCTTTTGGTATC 57.489 37.500 9.01 0.00 0.00 2.24
368 371 4.975631 TCCGGAAACTTCTTTTGGTATCA 58.024 39.130 0.00 0.00 0.00 2.15
369 372 5.378332 TCCGGAAACTTCTTTTGGTATCAA 58.622 37.500 0.00 0.00 0.00 2.57
370 373 5.828859 TCCGGAAACTTCTTTTGGTATCAAA 59.171 36.000 0.00 0.00 40.71 2.69
371 374 5.918576 CCGGAAACTTCTTTTGGTATCAAAC 59.081 40.000 0.00 0.00 41.97 2.93
372 375 6.460399 CCGGAAACTTCTTTTGGTATCAAACA 60.460 38.462 0.00 0.00 41.97 2.83
373 376 7.145323 CGGAAACTTCTTTTGGTATCAAACAT 58.855 34.615 0.00 0.00 41.97 2.71
374 377 7.114811 CGGAAACTTCTTTTGGTATCAAACATG 59.885 37.037 0.00 0.00 41.97 3.21
375 378 8.141268 GGAAACTTCTTTTGGTATCAAACATGA 58.859 33.333 0.00 0.00 41.97 3.07
376 379 9.696917 GAAACTTCTTTTGGTATCAAACATGAT 57.303 29.630 0.00 0.00 41.97 2.45
377 380 9.696917 AAACTTCTTTTGGTATCAAACATGATC 57.303 29.630 0.00 0.00 41.97 2.92
378 381 8.408043 ACTTCTTTTGGTATCAAACATGATCA 57.592 30.769 0.00 0.00 41.97 2.92
379 382 8.859090 ACTTCTTTTGGTATCAAACATGATCAA 58.141 29.630 0.00 0.00 41.97 2.57
380 383 9.350357 CTTCTTTTGGTATCAAACATGATCAAG 57.650 33.333 0.00 0.00 41.97 3.02
381 384 8.408043 TCTTTTGGTATCAAACATGATCAAGT 57.592 30.769 0.00 0.00 41.97 3.16
382 385 9.513906 TCTTTTGGTATCAAACATGATCAAGTA 57.486 29.630 3.64 0.00 41.97 2.24
410 413 9.917129 TGTAGTCGTATAAAAAGATTTGTCAGA 57.083 29.630 0.00 0.00 0.00 3.27
413 416 9.706691 AGTCGTATAAAAAGATTTGTCAGAGAA 57.293 29.630 0.00 0.00 0.00 2.87
422 425 9.578439 AAAAGATTTGTCAGAGAAAGACTTTTG 57.422 29.630 23.87 0.00 34.86 2.44
423 426 7.872113 AGATTTGTCAGAGAAAGACTTTTGT 57.128 32.000 1.12 0.00 36.94 2.83
424 427 8.286191 AGATTTGTCAGAGAAAGACTTTTGTT 57.714 30.769 1.12 0.00 36.94 2.83
425 428 8.186821 AGATTTGTCAGAGAAAGACTTTTGTTG 58.813 33.333 1.12 1.69 36.94 3.33
426 429 6.817765 TTGTCAGAGAAAGACTTTTGTTGT 57.182 33.333 1.12 0.00 36.94 3.32
427 430 7.915293 TTGTCAGAGAAAGACTTTTGTTGTA 57.085 32.000 1.12 0.00 36.94 2.41
428 431 8.506168 TTGTCAGAGAAAGACTTTTGTTGTAT 57.494 30.769 1.12 0.00 36.94 2.29
429 432 8.142994 TGTCAGAGAAAGACTTTTGTTGTATC 57.857 34.615 1.12 0.00 36.94 2.24
430 433 7.226720 TGTCAGAGAAAGACTTTTGTTGTATCC 59.773 37.037 1.12 0.00 36.94 2.59
431 434 7.442666 GTCAGAGAAAGACTTTTGTTGTATCCT 59.557 37.037 1.12 0.00 33.29 3.24
432 435 7.442364 TCAGAGAAAGACTTTTGTTGTATCCTG 59.558 37.037 1.12 0.00 0.00 3.86
433 436 6.712547 AGAGAAAGACTTTTGTTGTATCCTGG 59.287 38.462 1.12 0.00 0.00 4.45
434 437 6.601332 AGAAAGACTTTTGTTGTATCCTGGA 58.399 36.000 0.00 0.00 0.00 3.86
435 438 7.234355 AGAAAGACTTTTGTTGTATCCTGGAT 58.766 34.615 14.66 14.66 0.00 3.41
436 439 7.391833 AGAAAGACTTTTGTTGTATCCTGGATC 59.608 37.037 13.54 5.87 0.00 3.36
437 440 5.178797 AGACTTTTGTTGTATCCTGGATCG 58.821 41.667 13.54 0.00 0.00 3.69
438 441 5.046591 AGACTTTTGTTGTATCCTGGATCGA 60.047 40.000 13.54 2.43 0.00 3.59
439 442 5.178797 ACTTTTGTTGTATCCTGGATCGAG 58.821 41.667 13.54 0.00 0.00 4.04
440 443 3.819564 TTGTTGTATCCTGGATCGAGG 57.180 47.619 17.27 17.27 0.00 4.63
441 444 3.026707 TGTTGTATCCTGGATCGAGGA 57.973 47.619 26.49 26.49 46.47 3.71
446 449 2.733590 TCCTGGATCGAGGATTCGG 58.266 57.895 21.50 0.00 46.67 4.30
447 450 1.005630 CCTGGATCGAGGATTCGGC 60.006 63.158 18.45 0.00 46.67 5.54
448 451 1.742146 CTGGATCGAGGATTCGGCA 59.258 57.895 0.00 0.00 46.67 5.69
449 452 0.104855 CTGGATCGAGGATTCGGCAA 59.895 55.000 0.00 0.00 46.67 4.52
450 453 0.539518 TGGATCGAGGATTCGGCAAA 59.460 50.000 0.00 0.00 46.67 3.68
451 454 1.065782 TGGATCGAGGATTCGGCAAAA 60.066 47.619 0.00 0.00 46.67 2.44
452 455 2.014128 GGATCGAGGATTCGGCAAAAA 58.986 47.619 0.00 0.00 46.67 1.94
477 480 9.490379 AAAAGGCTATATACAAGCACTATACAC 57.510 33.333 10.27 0.00 41.93 2.90
478 481 7.776618 AGGCTATATACAAGCACTATACACA 57.223 36.000 10.27 0.00 41.93 3.72
479 482 7.603651 AGGCTATATACAAGCACTATACACAC 58.396 38.462 10.27 0.00 41.93 3.82
480 483 7.451877 AGGCTATATACAAGCACTATACACACT 59.548 37.037 10.27 0.00 41.93 3.55
481 484 8.737175 GGCTATATACAAGCACTATACACACTA 58.263 37.037 10.27 0.00 41.93 2.74
488 491 8.873215 ACAAGCACTATACACACTATATTGTC 57.127 34.615 0.00 0.00 0.00 3.18
489 492 7.648112 ACAAGCACTATACACACTATATTGTCG 59.352 37.037 0.00 0.00 0.00 4.35
490 493 7.273320 AGCACTATACACACTATATTGTCGT 57.727 36.000 0.00 0.00 0.00 4.34
491 494 7.361127 AGCACTATACACACTATATTGTCGTC 58.639 38.462 0.00 0.00 0.00 4.20
492 495 7.012989 AGCACTATACACACTATATTGTCGTCA 59.987 37.037 0.00 0.00 0.00 4.35
493 496 7.808381 GCACTATACACACTATATTGTCGTCAT 59.192 37.037 0.00 0.00 0.00 3.06
499 502 8.997621 ACACACTATATTGTCGTCATAAACTT 57.002 30.769 0.00 0.00 0.00 2.66
500 503 9.431887 ACACACTATATTGTCGTCATAAACTTT 57.568 29.630 0.00 0.00 0.00 2.66
525 528 3.799281 TTTTGCCCTGAAGTCAAACTG 57.201 42.857 0.00 0.00 30.45 3.16
526 529 2.727123 TTGCCCTGAAGTCAAACTGA 57.273 45.000 0.00 0.00 0.00 3.41
527 530 2.727123 TGCCCTGAAGTCAAACTGAA 57.273 45.000 0.00 0.00 0.00 3.02
528 531 3.228188 TGCCCTGAAGTCAAACTGAAT 57.772 42.857 0.00 0.00 0.00 2.57
529 532 3.565307 TGCCCTGAAGTCAAACTGAATT 58.435 40.909 0.00 0.00 37.39 2.17
530 533 4.724399 TGCCCTGAAGTCAAACTGAATTA 58.276 39.130 0.00 0.00 34.57 1.40
531 534 5.324409 TGCCCTGAAGTCAAACTGAATTAT 58.676 37.500 0.00 0.00 34.57 1.28
532 535 5.774690 TGCCCTGAAGTCAAACTGAATTATT 59.225 36.000 0.00 0.00 34.57 1.40
533 536 6.267471 TGCCCTGAAGTCAAACTGAATTATTT 59.733 34.615 0.00 0.00 34.57 1.40
534 537 6.808704 GCCCTGAAGTCAAACTGAATTATTTC 59.191 38.462 0.00 0.00 34.57 2.17
535 538 7.309438 GCCCTGAAGTCAAACTGAATTATTTCT 60.309 37.037 0.00 0.00 34.57 2.52
536 539 8.579863 CCCTGAAGTCAAACTGAATTATTTCTT 58.420 33.333 0.00 0.00 34.57 2.52
537 540 9.403110 CCTGAAGTCAAACTGAATTATTTCTTG 57.597 33.333 0.00 0.00 34.57 3.02
538 541 8.801715 TGAAGTCAAACTGAATTATTTCTTGC 57.198 30.769 0.00 0.00 34.57 4.01
539 542 7.867403 TGAAGTCAAACTGAATTATTTCTTGCC 59.133 33.333 0.00 0.00 34.57 4.52
540 543 6.691508 AGTCAAACTGAATTATTTCTTGCCC 58.308 36.000 0.00 0.00 32.78 5.36
541 544 6.267471 AGTCAAACTGAATTATTTCTTGCCCA 59.733 34.615 0.00 0.00 32.78 5.36
542 545 6.928492 GTCAAACTGAATTATTTCTTGCCCAA 59.072 34.615 0.00 0.00 32.78 4.12
543 546 7.440856 GTCAAACTGAATTATTTCTTGCCCAAA 59.559 33.333 0.00 0.00 32.78 3.28
544 547 7.440856 TCAAACTGAATTATTTCTTGCCCAAAC 59.559 33.333 0.00 0.00 32.78 2.93
545 548 6.670695 ACTGAATTATTTCTTGCCCAAACT 57.329 33.333 0.00 0.00 32.78 2.66
546 549 7.066307 ACTGAATTATTTCTTGCCCAAACTT 57.934 32.000 0.00 0.00 32.78 2.66
547 550 7.508687 ACTGAATTATTTCTTGCCCAAACTTT 58.491 30.769 0.00 0.00 32.78 2.66
548 551 7.992608 ACTGAATTATTTCTTGCCCAAACTTTT 59.007 29.630 0.00 0.00 32.78 2.27
549 552 8.744568 TGAATTATTTCTTGCCCAAACTTTTT 57.255 26.923 0.00 0.00 32.78 1.94
550 553 9.838339 TGAATTATTTCTTGCCCAAACTTTTTA 57.162 25.926 0.00 0.00 32.78 1.52
556 559 8.655651 TTTCTTGCCCAAACTTTTTATACAAG 57.344 30.769 0.00 0.00 34.69 3.16
557 560 7.354751 TCTTGCCCAAACTTTTTATACAAGT 57.645 32.000 0.00 0.00 35.94 3.16
558 561 8.466617 TCTTGCCCAAACTTTTTATACAAGTA 57.533 30.769 0.00 0.00 33.12 2.24
559 562 8.573035 TCTTGCCCAAACTTTTTATACAAGTAG 58.427 33.333 0.00 0.00 33.12 2.57
560 563 8.466617 TTGCCCAAACTTTTTATACAAGTAGA 57.533 30.769 0.00 0.00 33.12 2.59
561 564 8.466617 TGCCCAAACTTTTTATACAAGTAGAA 57.533 30.769 0.00 0.00 33.12 2.10
562 565 9.084533 TGCCCAAACTTTTTATACAAGTAGAAT 57.915 29.630 0.00 0.00 33.12 2.40
634 637 2.758736 TTTTGGTGCATATTGGGTGC 57.241 45.000 0.00 0.00 42.81 5.01
635 638 0.529833 TTTGGTGCATATTGGGTGCG 59.470 50.000 0.00 0.00 45.37 5.34
637 640 2.412937 GTGCATATTGGGTGCGCC 59.587 61.111 8.12 8.12 44.92 6.53
638 641 2.044551 TGCATATTGGGTGCGCCA 60.045 55.556 19.98 0.00 45.37 5.69
639 642 2.120282 TGCATATTGGGTGCGCCAG 61.120 57.895 19.98 1.26 45.37 4.85
640 643 1.823470 GCATATTGGGTGCGCCAGA 60.823 57.895 19.98 5.91 36.17 3.86
641 644 1.383456 GCATATTGGGTGCGCCAGAA 61.383 55.000 19.98 10.60 36.17 3.02
642 645 0.381801 CATATTGGGTGCGCCAGAAC 59.618 55.000 19.98 0.27 36.17 3.01
643 646 0.751643 ATATTGGGTGCGCCAGAACC 60.752 55.000 19.98 5.31 45.89 3.62
648 651 4.373116 GTGCGCCAGAACCCGAGA 62.373 66.667 4.18 0.00 0.00 4.04
649 652 4.069232 TGCGCCAGAACCCGAGAG 62.069 66.667 4.18 0.00 0.00 3.20
651 654 4.069232 CGCCAGAACCCGAGAGCA 62.069 66.667 0.00 0.00 0.00 4.26
652 655 2.435059 GCCAGAACCCGAGAGCAC 60.435 66.667 0.00 0.00 0.00 4.40
653 656 2.266055 CCAGAACCCGAGAGCACC 59.734 66.667 0.00 0.00 0.00 5.01
654 657 2.583441 CCAGAACCCGAGAGCACCA 61.583 63.158 0.00 0.00 0.00 4.17
655 658 1.371183 CAGAACCCGAGAGCACCAA 59.629 57.895 0.00 0.00 0.00 3.67
656 659 0.671781 CAGAACCCGAGAGCACCAAG 60.672 60.000 0.00 0.00 0.00 3.61
657 660 1.122019 AGAACCCGAGAGCACCAAGT 61.122 55.000 0.00 0.00 0.00 3.16
658 661 0.250338 GAACCCGAGAGCACCAAGTT 60.250 55.000 0.00 0.00 0.00 2.66
659 662 0.250338 AACCCGAGAGCACCAAGTTC 60.250 55.000 0.00 0.00 0.00 3.01
660 663 1.376037 CCCGAGAGCACCAAGTTCC 60.376 63.158 0.00 0.00 0.00 3.62
661 664 1.376037 CCGAGAGCACCAAGTTCCC 60.376 63.158 0.00 0.00 0.00 3.97
662 665 1.371183 CGAGAGCACCAAGTTCCCA 59.629 57.895 0.00 0.00 0.00 4.37
663 666 0.036010 CGAGAGCACCAAGTTCCCAT 60.036 55.000 0.00 0.00 0.00 4.00
664 667 1.743996 GAGAGCACCAAGTTCCCATC 58.256 55.000 0.00 0.00 0.00 3.51
665 668 0.329596 AGAGCACCAAGTTCCCATCC 59.670 55.000 0.00 0.00 0.00 3.51
666 669 0.681243 GAGCACCAAGTTCCCATCCC 60.681 60.000 0.00 0.00 0.00 3.85
667 670 2.046285 GCACCAAGTTCCCATCCCG 61.046 63.158 0.00 0.00 0.00 5.14
696 699 7.750229 ATCTTAGCATTGAGAAGTTTTGTCA 57.250 32.000 0.00 0.00 0.00 3.58
697 700 7.750229 TCTTAGCATTGAGAAGTTTTGTCAT 57.250 32.000 0.00 0.00 32.58 3.06
698 701 8.169977 TCTTAGCATTGAGAAGTTTTGTCATT 57.830 30.769 0.00 0.00 32.58 2.57
699 702 9.283768 TCTTAGCATTGAGAAGTTTTGTCATTA 57.716 29.630 0.00 0.00 32.58 1.90
702 705 8.114331 AGCATTGAGAAGTTTTGTCATTATCA 57.886 30.769 0.00 0.00 32.58 2.15
704 707 7.809331 GCATTGAGAAGTTTTGTCATTATCACA 59.191 33.333 0.00 0.00 32.58 3.58
708 711 8.506437 TGAGAAGTTTTGTCATTATCACATCAC 58.494 33.333 0.00 0.00 0.00 3.06
711 714 7.149569 AGTTTTGTCATTATCACATCACTGG 57.850 36.000 0.00 0.00 0.00 4.00
713 716 3.544684 TGTCATTATCACATCACTGGGC 58.455 45.455 0.00 0.00 0.00 5.36
714 717 2.545526 GTCATTATCACATCACTGGGCG 59.454 50.000 0.00 0.00 0.00 6.13
715 718 2.170397 TCATTATCACATCACTGGGCGT 59.830 45.455 0.00 0.00 0.00 5.68
716 719 3.386402 TCATTATCACATCACTGGGCGTA 59.614 43.478 0.00 0.00 0.00 4.42
717 720 4.040339 TCATTATCACATCACTGGGCGTAT 59.960 41.667 0.00 0.00 0.00 3.06
718 721 2.245159 ATCACATCACTGGGCGTATG 57.755 50.000 0.00 0.00 0.00 2.39
719 722 0.461870 TCACATCACTGGGCGTATGC 60.462 55.000 0.00 0.00 41.71 3.14
720 723 0.462581 CACATCACTGGGCGTATGCT 60.463 55.000 6.92 0.00 42.25 3.79
723 726 0.179073 ATCACTGGGCGTATGCTGTC 60.179 55.000 6.92 0.00 42.25 3.51
724 727 1.815421 CACTGGGCGTATGCTGTCC 60.815 63.158 6.92 0.05 42.25 4.02
725 728 2.203070 CTGGGCGTATGCTGTCCC 60.203 66.667 6.92 0.00 42.25 4.46
726 729 3.757248 CTGGGCGTATGCTGTCCCC 62.757 68.421 6.92 0.00 42.25 4.81
727 730 4.910585 GGGCGTATGCTGTCCCCG 62.911 72.222 6.92 0.00 42.25 5.73
728 731 4.157120 GGCGTATGCTGTCCCCGT 62.157 66.667 6.92 0.00 42.25 5.28
729 732 2.890474 GCGTATGCTGTCCCCGTG 60.890 66.667 0.00 0.00 38.39 4.94
730 733 2.202878 CGTATGCTGTCCCCGTGG 60.203 66.667 0.00 0.00 0.00 4.94
731 734 2.717044 CGTATGCTGTCCCCGTGGA 61.717 63.158 0.00 0.00 38.75 4.02
732 735 1.830145 GTATGCTGTCCCCGTGGAT 59.170 57.895 0.00 0.00 44.28 3.41
733 736 1.045407 GTATGCTGTCCCCGTGGATA 58.955 55.000 0.00 0.00 44.28 2.59
735 738 1.410850 ATGCTGTCCCCGTGGATAGG 61.411 60.000 12.36 0.00 46.91 2.57
736 739 2.808206 GCTGTCCCCGTGGATAGGG 61.808 68.421 12.36 0.00 46.91 3.53
743 746 2.606751 CCCGTGGATAGGGTCTAGAT 57.393 55.000 0.00 0.00 43.89 1.98
745 748 2.085320 CCGTGGATAGGGTCTAGATCG 58.915 57.143 0.00 0.00 0.00 3.69
746 749 2.290134 CCGTGGATAGGGTCTAGATCGA 60.290 54.545 0.00 0.00 0.00 3.59
747 750 3.409570 CGTGGATAGGGTCTAGATCGAA 58.590 50.000 0.00 0.00 0.00 3.71
748 751 4.011023 CGTGGATAGGGTCTAGATCGAAT 58.989 47.826 0.00 0.00 0.00 3.34
751 754 4.044191 TGGATAGGGTCTAGATCGAATGGA 59.956 45.833 0.00 0.00 0.00 3.41
752 755 4.642885 GGATAGGGTCTAGATCGAATGGAG 59.357 50.000 0.00 0.00 0.00 3.86
753 756 3.603965 AGGGTCTAGATCGAATGGAGT 57.396 47.619 0.00 0.00 0.00 3.85
755 758 3.892588 AGGGTCTAGATCGAATGGAGTTC 59.107 47.826 0.00 0.00 0.00 3.01
768 771 3.948196 TGGAGTTCGTTTTAAACCACG 57.052 42.857 6.16 6.16 37.77 4.94
777 780 6.062434 TCGTTTTAAACCACGAATTCATGT 57.938 33.333 11.64 0.00 42.30 3.21
778 781 5.910166 TCGTTTTAAACCACGAATTCATGTG 59.090 36.000 11.64 6.40 42.30 3.21
780 783 5.446143 TTTAAACCACGAATTCATGTGCT 57.554 34.783 6.22 0.00 34.77 4.40
781 784 3.559238 AAACCACGAATTCATGTGCTC 57.441 42.857 6.22 0.00 34.77 4.26
782 785 2.183478 ACCACGAATTCATGTGCTCA 57.817 45.000 6.22 0.00 34.77 4.26
785 788 3.119743 ACCACGAATTCATGTGCTCATTG 60.120 43.478 6.22 0.00 34.77 2.82
801 804 6.032722 GCTCATTGCAAATGAACATCAATC 57.967 37.500 1.71 0.00 42.31 2.67
802 805 5.810587 GCTCATTGCAAATGAACATCAATCT 59.189 36.000 1.71 0.00 42.31 2.40
803 806 6.312918 GCTCATTGCAAATGAACATCAATCTT 59.687 34.615 1.71 0.00 42.31 2.40
804 807 7.148474 GCTCATTGCAAATGAACATCAATCTTT 60.148 33.333 1.71 0.00 42.31 2.52
805 808 8.246908 TCATTGCAAATGAACATCAATCTTTC 57.753 30.769 1.71 0.00 0.00 2.62
806 809 7.873505 TCATTGCAAATGAACATCAATCTTTCA 59.126 29.630 1.71 0.00 33.89 2.69
807 810 8.499967 CATTGCAAATGAACATCAATCTTTCAA 58.500 29.630 1.71 0.00 33.13 2.69
809 812 8.246908 TGCAAATGAACATCAATCTTTCAATC 57.753 30.769 0.00 0.00 33.13 2.67
810 813 7.332430 TGCAAATGAACATCAATCTTTCAATCC 59.668 33.333 0.00 0.00 33.13 3.01
812 815 9.378551 CAAATGAACATCAATCTTTCAATCCAT 57.621 29.630 0.00 0.00 33.13 3.41
813 816 8.942338 AATGAACATCAATCTTTCAATCCATG 57.058 30.769 0.00 0.00 33.13 3.66
815 818 8.124808 TGAACATCAATCTTTCAATCCATGAA 57.875 30.769 0.00 0.00 46.22 2.57
824 827 4.963276 TTCAATCCATGAAATCGACACC 57.037 40.909 0.00 0.00 44.94 4.16
825 828 3.278574 TCAATCCATGAAATCGACACCC 58.721 45.455 0.00 0.00 34.30 4.61
826 829 3.054434 TCAATCCATGAAATCGACACCCT 60.054 43.478 0.00 0.00 34.30 4.34
828 831 4.982241 ATCCATGAAATCGACACCCTAT 57.018 40.909 0.00 0.00 0.00 2.57
829 832 6.042666 TCAATCCATGAAATCGACACCCTATA 59.957 38.462 0.00 0.00 34.30 1.31
830 833 5.209818 TCCATGAAATCGACACCCTATAC 57.790 43.478 0.00 0.00 0.00 1.47
834 837 5.925506 TGAAATCGACACCCTATACTCAA 57.074 39.130 0.00 0.00 0.00 3.02
835 838 6.479972 TGAAATCGACACCCTATACTCAAT 57.520 37.500 0.00 0.00 0.00 2.57
836 839 7.591421 TGAAATCGACACCCTATACTCAATA 57.409 36.000 0.00 0.00 0.00 1.90
837 840 8.190326 TGAAATCGACACCCTATACTCAATAT 57.810 34.615 0.00 0.00 0.00 1.28
838 841 8.647796 TGAAATCGACACCCTATACTCAATATT 58.352 33.333 0.00 0.00 0.00 1.28
839 842 9.490379 GAAATCGACACCCTATACTCAATATTT 57.510 33.333 0.00 0.00 0.00 1.40
840 843 9.490379 AAATCGACACCCTATACTCAATATTTC 57.510 33.333 0.00 0.00 0.00 2.17
841 844 7.591421 TCGACACCCTATACTCAATATTTCA 57.409 36.000 0.00 0.00 0.00 2.69
842 845 8.014070 TCGACACCCTATACTCAATATTTCAA 57.986 34.615 0.00 0.00 0.00 2.69
843 846 8.141909 TCGACACCCTATACTCAATATTTCAAG 58.858 37.037 0.00 0.00 0.00 3.02
844 847 7.926555 CGACACCCTATACTCAATATTTCAAGT 59.073 37.037 0.00 0.00 0.00 3.16
845 848 9.614792 GACACCCTATACTCAATATTTCAAGTT 57.385 33.333 1.43 0.00 0.00 2.66
859 862 9.942850 AATATTTCAAGTTAATTTTGACCCTGG 57.057 29.630 5.23 0.00 34.50 4.45
860 863 7.610580 ATTTCAAGTTAATTTTGACCCTGGA 57.389 32.000 0.00 0.00 34.50 3.86
861 864 6.399639 TTCAAGTTAATTTTGACCCTGGAC 57.600 37.500 0.00 0.00 34.50 4.02
862 865 4.830600 TCAAGTTAATTTTGACCCTGGACC 59.169 41.667 0.00 0.00 30.03 4.46
863 866 3.774734 AGTTAATTTTGACCCTGGACCC 58.225 45.455 0.00 0.00 0.00 4.46
864 867 3.141272 AGTTAATTTTGACCCTGGACCCA 59.859 43.478 0.00 0.00 0.00 4.51
865 868 2.309136 AATTTTGACCCTGGACCCAG 57.691 50.000 9.06 9.06 43.26 4.45
866 869 0.251787 ATTTTGACCCTGGACCCAGC 60.252 55.000 10.50 0.00 42.35 4.85
867 870 1.360393 TTTTGACCCTGGACCCAGCT 61.360 55.000 10.50 0.00 42.35 4.24
868 871 1.779061 TTTGACCCTGGACCCAGCTC 61.779 60.000 10.50 7.58 42.35 4.09
869 872 3.403558 GACCCTGGACCCAGCTCC 61.404 72.222 10.50 0.00 42.35 4.70
876 879 2.680352 GACCCAGCTCCGGTCTGA 60.680 66.667 22.08 0.00 45.41 3.27
877 880 2.997897 ACCCAGCTCCGGTCTGAC 60.998 66.667 22.08 0.00 33.54 3.51
878 881 4.135153 CCCAGCTCCGGTCTGACG 62.135 72.222 22.08 11.43 33.54 4.35
879 882 3.062466 CCAGCTCCGGTCTGACGA 61.062 66.667 22.08 0.00 35.47 4.20
880 883 2.487428 CAGCTCCGGTCTGACGAG 59.513 66.667 17.57 5.15 35.47 4.18
881 884 2.034376 AGCTCCGGTCTGACGAGT 59.966 61.111 0.00 0.67 35.47 4.18
882 885 2.179517 GCTCCGGTCTGACGAGTG 59.820 66.667 0.00 4.64 35.47 3.51
883 886 2.627737 GCTCCGGTCTGACGAGTGT 61.628 63.158 0.00 0.00 35.47 3.55
884 887 1.210413 CTCCGGTCTGACGAGTGTG 59.790 63.158 0.00 0.00 35.47 3.82
885 888 2.201436 CTCCGGTCTGACGAGTGTGG 62.201 65.000 0.00 0.00 35.47 4.17
886 889 2.430921 CGGTCTGACGAGTGTGGC 60.431 66.667 1.07 0.00 35.47 5.01
887 890 2.048127 GGTCTGACGAGTGTGGCC 60.048 66.667 0.00 0.00 0.00 5.36
888 891 2.574955 GGTCTGACGAGTGTGGCCT 61.575 63.158 3.32 0.00 0.00 5.19
889 892 1.080434 GTCTGACGAGTGTGGCCTC 60.080 63.158 3.32 0.00 0.00 4.70
890 893 1.228583 TCTGACGAGTGTGGCCTCT 60.229 57.895 3.32 0.00 0.00 3.69
891 894 1.080230 CTGACGAGTGTGGCCTCTG 60.080 63.158 3.32 0.00 0.00 3.35
892 895 2.433318 GACGAGTGTGGCCTCTGC 60.433 66.667 3.32 0.00 0.00 4.26
902 905 4.232310 GCCTCTGCCTCATCCAAC 57.768 61.111 0.00 0.00 0.00 3.77
903 906 1.300963 GCCTCTGCCTCATCCAACA 59.699 57.895 0.00 0.00 0.00 3.33
904 907 1.028868 GCCTCTGCCTCATCCAACAC 61.029 60.000 0.00 0.00 0.00 3.32
905 908 0.393537 CCTCTGCCTCATCCAACACC 60.394 60.000 0.00 0.00 0.00 4.16
906 909 0.617413 CTCTGCCTCATCCAACACCT 59.383 55.000 0.00 0.00 0.00 4.00
927 930 4.904241 CTTGAGAAGGAGTGGAATTCAGT 58.096 43.478 7.93 0.00 0.00 3.41
928 931 4.982241 TGAGAAGGAGTGGAATTCAGTT 57.018 40.909 7.93 0.00 0.00 3.16
929 932 4.899502 TGAGAAGGAGTGGAATTCAGTTC 58.100 43.478 7.93 1.07 36.04 3.01
930 933 4.347876 TGAGAAGGAGTGGAATTCAGTTCA 59.652 41.667 7.93 0.00 38.64 3.18
931 934 4.904241 AGAAGGAGTGGAATTCAGTTCAG 58.096 43.478 7.93 0.00 38.64 3.02
932 935 3.064900 AGGAGTGGAATTCAGTTCAGC 57.935 47.619 7.93 0.00 38.64 4.26
933 936 2.373169 AGGAGTGGAATTCAGTTCAGCA 59.627 45.455 7.93 0.00 38.64 4.41
934 937 2.746362 GGAGTGGAATTCAGTTCAGCAG 59.254 50.000 7.93 0.00 38.64 4.24
941 944 4.702131 GGAATTCAGTTCAGCAGGTACATT 59.298 41.667 7.93 0.00 38.64 2.71
949 952 2.153645 CAGCAGGTACATTGACAGCAA 58.846 47.619 0.00 0.00 38.60 3.91
957 960 3.844577 ACATTGACAGCAATCTTCAGC 57.155 42.857 0.00 0.00 42.66 4.26
966 969 3.057104 CAGCAATCTTCAGCATTTGGTCA 60.057 43.478 0.00 0.00 0.00 4.02
967 970 3.575256 AGCAATCTTCAGCATTTGGTCAA 59.425 39.130 0.00 0.00 0.00 3.18
975 978 4.072131 TCAGCATTTGGTCAAGTTCTACC 58.928 43.478 0.00 0.00 36.24 3.18
1184 1187 2.444706 CATGCTCTCCTCCCCCGA 60.445 66.667 0.00 0.00 0.00 5.14
1221 1230 2.571216 CGTCACCCTCCTCACCGTT 61.571 63.158 0.00 0.00 0.00 4.44
1226 1235 1.831736 CACCCTCCTCACCGTTATCTT 59.168 52.381 0.00 0.00 0.00 2.40
1320 1329 2.121506 TTCCCCAGCCACCTCCTT 60.122 61.111 0.00 0.00 0.00 3.36
1436 1445 1.665679 CTACAACACCATGATCACCGC 59.334 52.381 0.00 0.00 0.00 5.68
1455 1464 4.170062 CTCATGCGCAACGGCCTG 62.170 66.667 17.11 7.23 36.38 4.85
1542 1552 1.736645 CGACGGGTGCGTCAAGAAT 60.737 57.895 0.00 0.00 38.68 2.40
1596 1606 1.968017 CATGCTGCTGGACGGTGTT 60.968 57.895 0.00 0.00 0.00 3.32
1701 1711 1.379977 CGTGACCAGGGAGAGGCTA 60.380 63.158 0.00 0.00 0.00 3.93
2037 2053 1.370064 GGAGCACTACGGGTGTGTT 59.630 57.895 11.35 3.76 46.86 3.32
2196 2212 1.209019 CAGCTGATGCAGTACCTCCTT 59.791 52.381 8.42 0.00 42.74 3.36
2200 2216 2.762887 CTGATGCAGTACCTCCTTGAGA 59.237 50.000 0.00 0.00 0.00 3.27
2250 2266 0.242555 TGCTGTCGAACATCTACGCA 59.757 50.000 0.00 0.00 0.00 5.24
2375 2391 1.002134 ATGAGTTTGTCTGCGGGGG 60.002 57.895 0.00 0.00 0.00 5.40
2406 2422 2.281761 CAGGCTGCGGAGGTGTTT 60.282 61.111 5.93 0.00 0.00 2.83
2408 2424 3.365265 GGCTGCGGAGGTGTTTGG 61.365 66.667 5.93 0.00 0.00 3.28
2471 2487 2.609459 CCGTGAGTTATGAATGAGCACC 59.391 50.000 0.00 0.00 0.00 5.01
2475 2530 3.126831 GAGTTATGAATGAGCACCGGAG 58.873 50.000 9.46 0.00 0.00 4.63
2476 2531 1.599542 GTTATGAATGAGCACCGGAGC 59.400 52.381 16.88 16.88 0.00 4.70
2477 2532 0.249447 TATGAATGAGCACCGGAGCG 60.249 55.000 18.47 1.91 40.15 5.03
2478 2533 1.960040 ATGAATGAGCACCGGAGCGA 61.960 55.000 18.47 9.59 40.15 4.93
2479 2534 2.125512 AATGAGCACCGGAGCGAC 60.126 61.111 18.47 16.14 40.15 5.19
2480 2535 2.564553 GAATGAGCACCGGAGCGACT 62.565 60.000 18.47 0.30 40.15 4.18
2481 2536 2.842394 AATGAGCACCGGAGCGACTG 62.842 60.000 18.47 0.04 40.15 3.51
2487 2542 4.379243 CCGGAGCGACTGCCTGTT 62.379 66.667 0.00 0.00 44.31 3.16
2516 2571 1.546476 ACTGGAGGCTTTCAGTAGTCG 59.454 52.381 8.25 0.00 41.81 4.18
2539 2594 0.169009 GGCTCGGTGTTTCAAGCATC 59.831 55.000 0.00 0.00 36.47 3.91
2630 2880 2.576191 AGGCACCCAACATGTACAGTAT 59.424 45.455 0.00 0.00 0.00 2.12
2664 2916 2.323059 CATACAGGCGATGAGATCACG 58.677 52.381 0.00 0.00 0.00 4.35
2668 2920 0.817654 AGGCGATGAGATCACGTCAA 59.182 50.000 12.11 0.00 34.03 3.18
2737 4440 0.813184 AGAAGCAAATCCACATGGCG 59.187 50.000 0.00 0.00 34.44 5.69
2758 4461 1.417288 ACCATCGGATGCTCATCTCA 58.583 50.000 12.54 0.00 37.92 3.27
2874 5504 7.735326 ACTGTGGAAATATTGGACTACTACT 57.265 36.000 0.00 0.00 0.00 2.57
2875 5505 8.147244 ACTGTGGAAATATTGGACTACTACTT 57.853 34.615 0.00 0.00 0.00 2.24
2876 5506 8.258708 ACTGTGGAAATATTGGACTACTACTTC 58.741 37.037 0.00 0.00 0.00 3.01
2936 5866 1.043116 TGCTCCCGTATCCCTGTCAG 61.043 60.000 0.00 0.00 0.00 3.51
2953 5883 6.369065 CCCTGTCAGAAACAATAACAGTACTC 59.631 42.308 0.00 0.00 37.45 2.59
2992 5974 9.961264 ATTGCTGTCAGAAGATCATATATTCAT 57.039 29.630 3.32 0.00 33.11 2.57
3022 6010 6.235231 TCACCTACTCTTTCAAAGACAAGT 57.765 37.500 0.00 0.00 33.12 3.16
3043 6031 6.909550 AGTGGGAGAGAATATACATGTCTC 57.090 41.667 0.00 2.06 38.46 3.36
3047 6035 9.688091 GTGGGAGAGAATATACATGTCTCTATA 57.312 37.037 12.57 1.84 46.34 1.31
3117 6135 4.942761 AGAGAACATGGTGCAAACAAAT 57.057 36.364 0.00 0.00 0.00 2.32
3162 6180 1.461127 CTGGTTTGCGCTACAAGAGAC 59.539 52.381 9.73 0.00 40.06 3.36
3179 6197 3.137360 AGAGACACAAAAAGGCCTTCTCT 59.863 43.478 20.79 20.62 34.78 3.10
3184 6202 6.213600 AGACACAAAAAGGCCTTCTCTATAGA 59.786 38.462 20.79 1.69 0.00 1.98
3192 6210 7.691993 AAGGCCTTCTCTATAGATTGGTTTA 57.308 36.000 13.78 0.00 31.80 2.01
3271 6323 1.920574 CACGACGTCAATGATCAGGTC 59.079 52.381 17.16 2.95 0.00 3.85
3315 6367 8.497910 AAGGATCAAACATCTATAGAGGCTAA 57.502 34.615 14.16 0.00 0.00 3.09
3336 6388 0.039256 GCTTTGCTTGCGTCCATGAA 60.039 50.000 0.00 0.00 0.00 2.57
3372 6424 8.722394 GGAAAAGAACCAACAGTAGATTAGAAG 58.278 37.037 0.00 0.00 0.00 2.85
3378 6430 7.964604 ACCAACAGTAGATTAGAAGTTTGTC 57.035 36.000 0.00 0.00 0.00 3.18
3399 6451 5.221362 TGTCGTATCTTCAGTTCTTTGGTCA 60.221 40.000 0.00 0.00 0.00 4.02
3404 6456 4.442706 TCTTCAGTTCTTTGGTCACTCAC 58.557 43.478 0.00 0.00 0.00 3.51
3422 6474 2.158769 TCACTGTGACTCCAGTTGCATT 60.159 45.455 6.36 0.00 42.99 3.56
3437 6489 7.066163 TCCAGTTGCATTTACAGTATCATGAAG 59.934 37.037 0.00 0.00 0.00 3.02
3438 6490 7.191551 CAGTTGCATTTACAGTATCATGAAGG 58.808 38.462 0.00 0.00 0.00 3.46
3447 6499 5.809001 ACAGTATCATGAAGGCTGAAAAGA 58.191 37.500 22.76 0.00 0.00 2.52
3458 6510 4.410099 AGGCTGAAAAGAATCCAACATGA 58.590 39.130 0.00 0.00 0.00 3.07
3466 6518 8.134895 TGAAAAGAATCCAACATGAACAGTAAC 58.865 33.333 0.00 0.00 0.00 2.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.956333 GGGGGTGATAGGTTATGTTTGC 59.044 50.000 0.00 0.00 0.00 3.68
2 3 3.594232 TGTGGGGGTGATAGGTTATGTTT 59.406 43.478 0.00 0.00 0.00 2.83
4 5 2.853430 TGTGGGGGTGATAGGTTATGT 58.147 47.619 0.00 0.00 0.00 2.29
6 7 4.042934 GCTAATGTGGGGGTGATAGGTTAT 59.957 45.833 0.00 0.00 0.00 1.89
7 8 3.393278 GCTAATGTGGGGGTGATAGGTTA 59.607 47.826 0.00 0.00 0.00 2.85
9 10 1.774856 GCTAATGTGGGGGTGATAGGT 59.225 52.381 0.00 0.00 0.00 3.08
10 11 1.774254 TGCTAATGTGGGGGTGATAGG 59.226 52.381 0.00 0.00 0.00 2.57
11 12 2.439507 AGTGCTAATGTGGGGGTGATAG 59.560 50.000 0.00 0.00 0.00 2.08
12 13 2.487775 AGTGCTAATGTGGGGGTGATA 58.512 47.619 0.00 0.00 0.00 2.15
13 14 1.298953 AGTGCTAATGTGGGGGTGAT 58.701 50.000 0.00 0.00 0.00 3.06
14 15 1.959710 TAGTGCTAATGTGGGGGTGA 58.040 50.000 0.00 0.00 0.00 4.02
15 16 2.799126 TTAGTGCTAATGTGGGGGTG 57.201 50.000 0.00 0.00 0.00 4.61
16 17 4.303794 TCTATTAGTGCTAATGTGGGGGT 58.696 43.478 13.09 0.00 36.52 4.95
17 18 4.974645 TCTATTAGTGCTAATGTGGGGG 57.025 45.455 13.09 0.34 36.52 5.40
18 19 7.680730 AGTAATCTATTAGTGCTAATGTGGGG 58.319 38.462 13.09 1.65 36.52 4.96
19 20 7.542477 CGAGTAATCTATTAGTGCTAATGTGGG 59.458 40.741 13.09 3.51 36.52 4.61
20 21 8.297426 TCGAGTAATCTATTAGTGCTAATGTGG 58.703 37.037 13.09 5.39 36.52 4.17
21 22 9.335891 CTCGAGTAATCTATTAGTGCTAATGTG 57.664 37.037 3.62 7.30 36.52 3.21
22 23 8.024285 GCTCGAGTAATCTATTAGTGCTAATGT 58.976 37.037 15.13 0.00 36.52 2.71
23 24 7.217258 CGCTCGAGTAATCTATTAGTGCTAATG 59.783 40.741 15.13 5.35 36.52 1.90
24 25 7.119407 TCGCTCGAGTAATCTATTAGTGCTAAT 59.881 37.037 15.13 9.13 39.02 1.73
25 26 6.426025 TCGCTCGAGTAATCTATTAGTGCTAA 59.574 38.462 15.13 0.00 0.00 3.09
26 27 5.930569 TCGCTCGAGTAATCTATTAGTGCTA 59.069 40.000 15.13 0.00 0.00 3.49
27 28 4.755629 TCGCTCGAGTAATCTATTAGTGCT 59.244 41.667 15.13 0.00 0.00 4.40
28 29 5.032100 TCGCTCGAGTAATCTATTAGTGC 57.968 43.478 15.13 0.00 0.00 4.40
29 30 5.566016 GCTTCGCTCGAGTAATCTATTAGTG 59.434 44.000 15.13 0.00 0.00 2.74
30 31 5.470777 AGCTTCGCTCGAGTAATCTATTAGT 59.529 40.000 15.13 0.00 30.62 2.24
31 32 5.933790 AGCTTCGCTCGAGTAATCTATTAG 58.066 41.667 15.13 0.77 30.62 1.73
32 33 5.943706 AGCTTCGCTCGAGTAATCTATTA 57.056 39.130 15.13 0.00 30.62 0.98
33 34 4.839668 AGCTTCGCTCGAGTAATCTATT 57.160 40.909 15.13 0.00 30.62 1.73
34 35 4.154556 GGTAGCTTCGCTCGAGTAATCTAT 59.845 45.833 15.13 0.00 40.44 1.98
35 36 3.497640 GGTAGCTTCGCTCGAGTAATCTA 59.502 47.826 15.13 10.89 40.44 1.98
36 37 2.291190 GGTAGCTTCGCTCGAGTAATCT 59.709 50.000 15.13 11.82 40.44 2.40
37 38 2.291190 AGGTAGCTTCGCTCGAGTAATC 59.709 50.000 15.13 4.97 40.44 1.75
38 39 2.291190 GAGGTAGCTTCGCTCGAGTAAT 59.709 50.000 15.13 0.00 40.44 1.89
39 40 1.669779 GAGGTAGCTTCGCTCGAGTAA 59.330 52.381 15.13 8.15 40.44 2.24
40 41 1.134461 AGAGGTAGCTTCGCTCGAGTA 60.134 52.381 15.13 0.00 40.44 2.59
41 42 0.393267 AGAGGTAGCTTCGCTCGAGT 60.393 55.000 15.13 0.00 40.44 4.18
42 43 1.584175 TAGAGGTAGCTTCGCTCGAG 58.416 55.000 8.45 8.45 40.44 4.04
43 44 1.669779 GTTAGAGGTAGCTTCGCTCGA 59.330 52.381 0.00 0.00 40.44 4.04
44 45 1.268640 GGTTAGAGGTAGCTTCGCTCG 60.269 57.143 0.00 0.00 40.44 5.03
45 46 2.025898 AGGTTAGAGGTAGCTTCGCTC 58.974 52.381 0.00 0.00 40.44 5.03
46 47 2.025898 GAGGTTAGAGGTAGCTTCGCT 58.974 52.381 0.00 0.00 43.41 4.93
47 48 1.067364 GGAGGTTAGAGGTAGCTTCGC 59.933 57.143 0.00 0.00 0.00 4.70
48 49 1.682323 GGGAGGTTAGAGGTAGCTTCG 59.318 57.143 0.00 0.00 0.00 3.79
49 50 3.035055 AGGGAGGTTAGAGGTAGCTTC 57.965 52.381 0.00 0.00 0.00 3.86
50 51 3.376636 GAAGGGAGGTTAGAGGTAGCTT 58.623 50.000 0.00 0.00 0.00 3.74
51 52 2.687314 CGAAGGGAGGTTAGAGGTAGCT 60.687 54.545 0.00 0.00 0.00 3.32
52 53 1.682323 CGAAGGGAGGTTAGAGGTAGC 59.318 57.143 0.00 0.00 0.00 3.58
53 54 1.682323 GCGAAGGGAGGTTAGAGGTAG 59.318 57.143 0.00 0.00 0.00 3.18
54 55 1.687368 GGCGAAGGGAGGTTAGAGGTA 60.687 57.143 0.00 0.00 0.00 3.08
55 56 0.976590 GGCGAAGGGAGGTTAGAGGT 60.977 60.000 0.00 0.00 0.00 3.85
56 57 1.823976 GGCGAAGGGAGGTTAGAGG 59.176 63.158 0.00 0.00 0.00 3.69
57 58 1.437986 CGGCGAAGGGAGGTTAGAG 59.562 63.158 0.00 0.00 0.00 2.43
58 59 2.056223 CCGGCGAAGGGAGGTTAGA 61.056 63.158 9.30 0.00 0.00 2.10
59 60 1.896122 AACCGGCGAAGGGAGGTTAG 61.896 60.000 9.30 0.00 44.29 2.34
60 61 0.614415 TAACCGGCGAAGGGAGGTTA 60.614 55.000 9.30 3.29 44.29 2.85
61 62 3.246880 AACCGGCGAAGGGAGGTT 61.247 61.111 9.30 0.00 41.66 3.50
62 63 2.284112 TAACCGGCGAAGGGAGGT 60.284 61.111 9.30 0.00 38.88 3.85
63 64 2.186125 GTAACCGGCGAAGGGAGG 59.814 66.667 9.30 0.00 35.02 4.30
64 65 2.202703 CGTAACCGGCGAAGGGAG 60.203 66.667 9.30 0.00 35.02 4.30
65 66 4.440127 GCGTAACCGGCGAAGGGA 62.440 66.667 9.30 0.00 35.02 4.20
66 67 4.446413 AGCGTAACCGGCGAAGGG 62.446 66.667 9.30 0.00 35.02 3.95
67 68 3.186047 CAGCGTAACCGGCGAAGG 61.186 66.667 9.30 0.00 35.00 3.46
68 69 3.849953 GCAGCGTAACCGGCGAAG 61.850 66.667 9.30 0.00 35.00 3.79
75 76 2.735857 AACGACCGCAGCGTAACC 60.736 61.111 15.05 0.00 41.75 2.85
76 77 2.305127 ACAACGACCGCAGCGTAAC 61.305 57.895 15.05 3.59 41.75 2.50
77 78 2.027897 ACAACGACCGCAGCGTAA 59.972 55.556 15.05 0.00 41.75 3.18
78 79 2.731721 CACAACGACCGCAGCGTA 60.732 61.111 15.05 0.00 41.75 4.42
93 94 0.036022 GCTGGAGATAGGGATGGCAC 59.964 60.000 0.00 0.00 0.00 5.01
94 95 1.130054 GGCTGGAGATAGGGATGGCA 61.130 60.000 0.00 0.00 0.00 4.92
95 96 1.682257 GGCTGGAGATAGGGATGGC 59.318 63.158 0.00 0.00 0.00 4.40
96 97 0.833834 ACGGCTGGAGATAGGGATGG 60.834 60.000 0.00 0.00 0.00 3.51
97 98 0.319728 CACGGCTGGAGATAGGGATG 59.680 60.000 0.00 0.00 0.00 3.51
98 99 0.833834 CCACGGCTGGAGATAGGGAT 60.834 60.000 0.00 0.00 40.55 3.85
99 100 1.457643 CCACGGCTGGAGATAGGGA 60.458 63.158 0.00 0.00 40.55 4.20
100 101 3.142393 CCACGGCTGGAGATAGGG 58.858 66.667 0.00 0.00 40.55 3.53
101 102 1.762522 ATGCCACGGCTGGAGATAGG 61.763 60.000 9.92 0.00 40.55 2.57
102 103 0.107456 AATGCCACGGCTGGAGATAG 59.893 55.000 9.92 0.00 40.55 2.08
103 104 0.106708 GAATGCCACGGCTGGAGATA 59.893 55.000 9.92 0.00 40.55 1.98
104 105 1.153086 GAATGCCACGGCTGGAGAT 60.153 57.895 9.92 0.00 40.55 2.75
105 106 2.268920 GAATGCCACGGCTGGAGA 59.731 61.111 9.92 0.00 40.55 3.71
106 107 2.825836 GGAATGCCACGGCTGGAG 60.826 66.667 9.92 0.00 40.55 3.86
107 108 4.424711 GGGAATGCCACGGCTGGA 62.425 66.667 9.92 0.00 40.55 3.86
108 109 4.738998 TGGGAATGCCACGGCTGG 62.739 66.667 9.92 0.00 42.51 4.85
109 110 1.606885 AAATGGGAATGCCACGGCTG 61.607 55.000 9.92 0.00 42.51 4.85
110 111 1.305213 AAATGGGAATGCCACGGCT 60.305 52.632 9.92 0.00 42.51 5.52
111 112 1.141665 GAAATGGGAATGCCACGGC 59.858 57.895 0.00 0.00 42.35 5.68
112 113 0.457035 CAGAAATGGGAATGCCACGG 59.543 55.000 0.00 0.00 35.15 4.94
113 114 0.179129 GCAGAAATGGGAATGCCACG 60.179 55.000 0.00 0.00 35.15 4.94
114 115 0.896923 TGCAGAAATGGGAATGCCAC 59.103 50.000 0.00 0.00 37.89 5.01
115 116 1.758280 GATGCAGAAATGGGAATGCCA 59.242 47.619 0.00 0.00 37.89 4.92
116 117 1.269413 CGATGCAGAAATGGGAATGCC 60.269 52.381 0.00 0.00 37.89 4.40
117 118 1.269413 CCGATGCAGAAATGGGAATGC 60.269 52.381 0.00 0.00 39.14 3.56
118 119 1.269413 GCCGATGCAGAAATGGGAATG 60.269 52.381 0.00 0.00 37.47 2.67
119 120 1.035139 GCCGATGCAGAAATGGGAAT 58.965 50.000 0.00 0.00 37.47 3.01
120 121 1.375853 CGCCGATGCAGAAATGGGAA 61.376 55.000 0.00 0.00 37.32 3.97
121 122 1.819208 CGCCGATGCAGAAATGGGA 60.819 57.895 0.00 0.00 37.32 4.37
122 123 1.656818 AACGCCGATGCAGAAATGGG 61.657 55.000 0.00 0.00 37.32 4.00
123 124 0.523968 CAACGCCGATGCAGAAATGG 60.524 55.000 0.00 0.00 37.32 3.16
131 132 4.210304 GAGACGCAACGCCGATGC 62.210 66.667 9.49 9.49 40.41 3.91
136 137 2.717809 GAAGACGAGACGCAACGCC 61.718 63.158 0.00 0.00 0.00 5.68
157 158 9.748708 CAAAGATATCACTCAACTTTCCAAAAA 57.251 29.630 5.32 0.00 0.00 1.94
161 162 5.415701 GGCAAAGATATCACTCAACTTTCCA 59.584 40.000 5.32 0.00 0.00 3.53
167 168 7.315142 TGAAAATGGCAAAGATATCACTCAAC 58.685 34.615 5.32 0.00 0.00 3.18
177 178 5.410439 GCTCACAAATGAAAATGGCAAAGAT 59.590 36.000 0.00 0.00 33.30 2.40
267 270 6.957020 ACCCATGTTATCCTTTGTATTTTCCA 59.043 34.615 0.00 0.00 0.00 3.53
268 271 7.418337 ACCCATGTTATCCTTTGTATTTTCC 57.582 36.000 0.00 0.00 0.00 3.13
270 273 7.896496 TGGTACCCATGTTATCCTTTGTATTTT 59.104 33.333 10.07 0.00 0.00 1.82
271 274 7.415086 TGGTACCCATGTTATCCTTTGTATTT 58.585 34.615 10.07 0.00 0.00 1.40
272 275 6.975949 TGGTACCCATGTTATCCTTTGTATT 58.024 36.000 10.07 0.00 0.00 1.89
273 276 6.584471 TGGTACCCATGTTATCCTTTGTAT 57.416 37.500 10.07 0.00 0.00 2.29
274 277 5.630539 GCTGGTACCCATGTTATCCTTTGTA 60.631 44.000 10.07 0.00 30.82 2.41
275 278 4.855340 CTGGTACCCATGTTATCCTTTGT 58.145 43.478 10.07 0.00 30.82 2.83
276 279 3.632145 GCTGGTACCCATGTTATCCTTTG 59.368 47.826 10.07 0.00 30.82 2.77
277 280 3.684413 CGCTGGTACCCATGTTATCCTTT 60.684 47.826 10.07 0.00 30.82 3.11
278 281 2.158813 CGCTGGTACCCATGTTATCCTT 60.159 50.000 10.07 0.00 30.82 3.36
279 282 1.416401 CGCTGGTACCCATGTTATCCT 59.584 52.381 10.07 0.00 30.82 3.24
280 283 1.878953 CGCTGGTACCCATGTTATCC 58.121 55.000 10.07 0.00 30.82 2.59
281 284 1.226746 GCGCTGGTACCCATGTTATC 58.773 55.000 10.07 0.00 30.82 1.75
282 285 0.544223 TGCGCTGGTACCCATGTTAT 59.456 50.000 10.07 0.00 30.82 1.89
283 286 0.391927 GTGCGCTGGTACCCATGTTA 60.392 55.000 10.07 0.00 30.82 2.41
284 287 1.674322 GTGCGCTGGTACCCATGTT 60.674 57.895 10.07 0.00 30.82 2.71
285 288 2.046314 GTGCGCTGGTACCCATGT 60.046 61.111 10.07 0.00 30.82 3.21
286 289 2.824041 GGTGCGCTGGTACCCATG 60.824 66.667 10.07 0.60 42.54 3.66
291 294 0.944386 CATATTGGGTGCGCTGGTAC 59.056 55.000 9.73 0.00 0.00 3.34
292 295 0.817634 GCATATTGGGTGCGCTGGTA 60.818 55.000 9.73 0.00 32.29 3.25
293 296 2.120909 GCATATTGGGTGCGCTGGT 61.121 57.895 9.73 0.00 32.29 4.00
294 297 2.723746 GCATATTGGGTGCGCTGG 59.276 61.111 9.73 0.00 32.29 4.85
295 298 1.665264 TTGGCATATTGGGTGCGCTG 61.665 55.000 9.73 0.00 43.40 5.18
296 299 0.969917 TTTGGCATATTGGGTGCGCT 60.970 50.000 9.73 0.00 43.40 5.92
297 300 0.108424 TTTTGGCATATTGGGTGCGC 60.108 50.000 0.00 0.00 43.40 6.09
298 301 2.376808 TTTTTGGCATATTGGGTGCG 57.623 45.000 0.00 0.00 43.40 5.34
341 344 5.984725 ACCAAAAGAAGTTTCCGGATTTTT 58.015 33.333 4.15 0.00 0.00 1.94
342 345 5.607939 ACCAAAAGAAGTTTCCGGATTTT 57.392 34.783 4.15 5.05 0.00 1.82
343 346 6.492087 TGATACCAAAAGAAGTTTCCGGATTT 59.508 34.615 4.15 0.00 0.00 2.17
344 347 6.007703 TGATACCAAAAGAAGTTTCCGGATT 58.992 36.000 4.15 0.00 0.00 3.01
345 348 5.566469 TGATACCAAAAGAAGTTTCCGGAT 58.434 37.500 4.15 0.00 0.00 4.18
346 349 4.975631 TGATACCAAAAGAAGTTTCCGGA 58.024 39.130 0.00 0.00 0.00 5.14
347 350 5.699097 TTGATACCAAAAGAAGTTTCCGG 57.301 39.130 0.00 0.00 0.00 5.14
348 351 6.500041 TGTTTGATACCAAAAGAAGTTTCCG 58.500 36.000 0.00 0.00 43.18 4.30
349 352 8.141268 TCATGTTTGATACCAAAAGAAGTTTCC 58.859 33.333 0.00 0.00 43.18 3.13
350 353 9.696917 ATCATGTTTGATACCAAAAGAAGTTTC 57.303 29.630 0.00 0.00 43.18 2.78
351 354 9.696917 GATCATGTTTGATACCAAAAGAAGTTT 57.303 29.630 0.00 0.00 42.73 2.66
352 355 8.859090 TGATCATGTTTGATACCAAAAGAAGTT 58.141 29.630 0.00 0.00 42.73 2.66
353 356 8.408043 TGATCATGTTTGATACCAAAAGAAGT 57.592 30.769 0.00 0.00 42.73 3.01
354 357 9.350357 CTTGATCATGTTTGATACCAAAAGAAG 57.650 33.333 0.00 0.00 42.73 2.85
355 358 8.859090 ACTTGATCATGTTTGATACCAAAAGAA 58.141 29.630 8.37 0.00 42.73 2.52
356 359 8.408043 ACTTGATCATGTTTGATACCAAAAGA 57.592 30.769 8.37 0.00 42.73 2.52
360 363 9.241919 ACAATACTTGATCATGTTTGATACCAA 57.758 29.630 25.53 9.22 42.73 3.67
361 364 8.806429 ACAATACTTGATCATGTTTGATACCA 57.194 30.769 25.53 9.72 42.73 3.25
365 368 8.820933 CGACTACAATACTTGATCATGTTTGAT 58.179 33.333 25.53 13.02 45.39 2.57
366 369 7.817478 ACGACTACAATACTTGATCATGTTTGA 59.183 33.333 25.53 11.77 36.00 2.69
367 370 7.963981 ACGACTACAATACTTGATCATGTTTG 58.036 34.615 18.30 20.28 0.00 2.93
368 371 9.817809 ATACGACTACAATACTTGATCATGTTT 57.182 29.630 18.30 8.93 0.00 2.83
384 387 9.917129 TCTGACAAATCTTTTTATACGACTACA 57.083 29.630 0.00 0.00 0.00 2.74
387 390 9.706691 TTCTCTGACAAATCTTTTTATACGACT 57.293 29.630 0.00 0.00 0.00 4.18
396 399 9.578439 CAAAAGTCTTTCTCTGACAAATCTTTT 57.422 29.630 0.00 11.52 36.94 2.27
397 400 8.743714 ACAAAAGTCTTTCTCTGACAAATCTTT 58.256 29.630 0.00 0.00 36.94 2.52
398 401 8.286191 ACAAAAGTCTTTCTCTGACAAATCTT 57.714 30.769 0.00 0.00 36.94 2.40
399 402 7.872113 ACAAAAGTCTTTCTCTGACAAATCT 57.128 32.000 0.00 0.00 36.94 2.40
400 403 7.970614 ACAACAAAAGTCTTTCTCTGACAAATC 59.029 33.333 0.00 0.00 36.94 2.17
401 404 7.830739 ACAACAAAAGTCTTTCTCTGACAAAT 58.169 30.769 0.00 0.00 36.94 2.32
402 405 7.214467 ACAACAAAAGTCTTTCTCTGACAAA 57.786 32.000 0.00 0.00 36.94 2.83
403 406 6.817765 ACAACAAAAGTCTTTCTCTGACAA 57.182 33.333 0.00 0.00 36.94 3.18
404 407 7.226720 GGATACAACAAAAGTCTTTCTCTGACA 59.773 37.037 0.00 0.00 36.94 3.58
405 408 7.442666 AGGATACAACAAAAGTCTTTCTCTGAC 59.557 37.037 0.00 0.00 41.41 3.51
406 409 7.442364 CAGGATACAACAAAAGTCTTTCTCTGA 59.558 37.037 0.00 0.00 41.41 3.27
407 410 7.308229 CCAGGATACAACAAAAGTCTTTCTCTG 60.308 40.741 0.00 0.00 41.41 3.35
408 411 6.712547 CCAGGATACAACAAAAGTCTTTCTCT 59.287 38.462 0.00 0.00 41.41 3.10
409 412 6.710744 TCCAGGATACAACAAAAGTCTTTCTC 59.289 38.462 0.00 0.00 41.41 2.87
410 413 6.601332 TCCAGGATACAACAAAAGTCTTTCT 58.399 36.000 0.00 0.00 41.41 2.52
411 414 6.877611 TCCAGGATACAACAAAAGTCTTTC 57.122 37.500 0.00 0.00 41.41 2.62
412 415 6.149474 CGATCCAGGATACAACAAAAGTCTTT 59.851 38.462 0.32 0.00 41.41 2.52
413 416 5.643777 CGATCCAGGATACAACAAAAGTCTT 59.356 40.000 0.32 0.00 41.41 3.01
414 417 5.046591 TCGATCCAGGATACAACAAAAGTCT 60.047 40.000 0.32 0.00 41.41 3.24
415 418 5.175859 TCGATCCAGGATACAACAAAAGTC 58.824 41.667 0.32 0.00 41.41 3.01
416 419 5.160607 TCGATCCAGGATACAACAAAAGT 57.839 39.130 0.32 0.00 41.41 2.66
417 420 4.572389 CCTCGATCCAGGATACAACAAAAG 59.428 45.833 0.32 0.00 35.20 2.27
418 421 4.224147 TCCTCGATCCAGGATACAACAAAA 59.776 41.667 4.76 0.00 37.68 2.44
419 422 3.772572 TCCTCGATCCAGGATACAACAAA 59.227 43.478 4.76 0.00 37.68 2.83
420 423 3.371034 TCCTCGATCCAGGATACAACAA 58.629 45.455 4.76 0.00 37.68 2.83
421 424 3.026707 TCCTCGATCCAGGATACAACA 57.973 47.619 4.76 0.00 37.68 3.33
451 454 9.490379 GTGTATAGTGCTTGTATATAGCCTTTT 57.510 33.333 7.19 1.23 37.85 2.27
452 455 8.647796 TGTGTATAGTGCTTGTATATAGCCTTT 58.352 33.333 7.19 3.56 37.85 3.11
453 456 8.088981 GTGTGTATAGTGCTTGTATATAGCCTT 58.911 37.037 7.19 0.24 37.85 4.35
454 457 7.451877 AGTGTGTATAGTGCTTGTATATAGCCT 59.548 37.037 7.19 6.67 37.85 4.58
455 458 7.603651 AGTGTGTATAGTGCTTGTATATAGCC 58.396 38.462 7.19 0.92 37.85 3.93
462 465 9.961265 GACAATATAGTGTGTATAGTGCTTGTA 57.039 33.333 11.11 0.00 31.07 2.41
463 466 7.648112 CGACAATATAGTGTGTATAGTGCTTGT 59.352 37.037 11.11 0.00 31.07 3.16
464 467 7.648112 ACGACAATATAGTGTGTATAGTGCTTG 59.352 37.037 11.11 0.00 31.07 4.01
465 468 7.713750 ACGACAATATAGTGTGTATAGTGCTT 58.286 34.615 11.11 0.00 31.07 3.91
466 469 7.012989 TGACGACAATATAGTGTGTATAGTGCT 59.987 37.037 11.11 0.00 31.07 4.40
467 470 7.136772 TGACGACAATATAGTGTGTATAGTGC 58.863 38.462 11.11 0.00 31.07 4.40
474 477 8.997621 AAGTTTATGACGACAATATAGTGTGT 57.002 30.769 11.11 9.06 0.00 3.72
507 510 2.727123 TCAGTTTGACTTCAGGGCAA 57.273 45.000 0.00 0.00 41.91 4.52
508 511 2.727123 TTCAGTTTGACTTCAGGGCA 57.273 45.000 0.00 0.00 0.00 5.36
509 512 5.904362 ATAATTCAGTTTGACTTCAGGGC 57.096 39.130 0.00 0.00 0.00 5.19
510 513 8.115490 AGAAATAATTCAGTTTGACTTCAGGG 57.885 34.615 0.00 0.00 38.06 4.45
511 514 9.403110 CAAGAAATAATTCAGTTTGACTTCAGG 57.597 33.333 0.00 0.00 38.06 3.86
512 515 8.909671 GCAAGAAATAATTCAGTTTGACTTCAG 58.090 33.333 0.00 0.00 38.06 3.02
513 516 7.867403 GGCAAGAAATAATTCAGTTTGACTTCA 59.133 33.333 0.00 0.00 38.06 3.02
514 517 7.329471 GGGCAAGAAATAATTCAGTTTGACTTC 59.671 37.037 0.00 0.00 38.06 3.01
515 518 7.154656 GGGCAAGAAATAATTCAGTTTGACTT 58.845 34.615 0.00 0.00 38.06 3.01
516 519 6.267471 TGGGCAAGAAATAATTCAGTTTGACT 59.733 34.615 0.00 0.00 38.06 3.41
517 520 6.454795 TGGGCAAGAAATAATTCAGTTTGAC 58.545 36.000 0.00 0.00 38.06 3.18
518 521 6.662865 TGGGCAAGAAATAATTCAGTTTGA 57.337 33.333 0.00 0.00 38.06 2.69
519 522 7.442062 AGTTTGGGCAAGAAATAATTCAGTTTG 59.558 33.333 0.00 0.00 38.06 2.93
520 523 7.508687 AGTTTGGGCAAGAAATAATTCAGTTT 58.491 30.769 0.00 0.00 38.06 2.66
521 524 7.066307 AGTTTGGGCAAGAAATAATTCAGTT 57.934 32.000 0.00 0.00 38.06 3.16
522 525 6.670695 AGTTTGGGCAAGAAATAATTCAGT 57.329 33.333 0.00 0.00 38.06 3.41
523 526 7.967890 AAAGTTTGGGCAAGAAATAATTCAG 57.032 32.000 0.00 0.00 38.06 3.02
524 527 8.744568 AAAAAGTTTGGGCAAGAAATAATTCA 57.255 26.923 0.00 0.00 38.06 2.57
530 533 9.271828 CTTGTATAAAAAGTTTGGGCAAGAAAT 57.728 29.630 10.50 0.00 34.49 2.17
531 534 8.261522 ACTTGTATAAAAAGTTTGGGCAAGAAA 58.738 29.630 17.56 0.00 34.16 2.52
532 535 7.787028 ACTTGTATAAAAAGTTTGGGCAAGAA 58.213 30.769 17.56 0.00 34.16 2.52
533 536 7.354751 ACTTGTATAAAAAGTTTGGGCAAGA 57.645 32.000 17.56 0.00 34.16 3.02
534 537 8.573035 TCTACTTGTATAAAAAGTTTGGGCAAG 58.427 33.333 7.24 12.76 38.73 4.01
535 538 8.466617 TCTACTTGTATAAAAAGTTTGGGCAA 57.533 30.769 7.24 0.00 38.73 4.52
536 539 8.466617 TTCTACTTGTATAAAAAGTTTGGGCA 57.533 30.769 7.24 0.00 38.73 5.36
614 617 2.611473 CGCACCCAATATGCACCAAAAA 60.611 45.455 0.00 0.00 43.57 1.94
615 618 1.067283 CGCACCCAATATGCACCAAAA 60.067 47.619 0.00 0.00 43.57 2.44
616 619 0.529833 CGCACCCAATATGCACCAAA 59.470 50.000 0.00 0.00 43.57 3.28
617 620 1.943116 GCGCACCCAATATGCACCAA 61.943 55.000 0.30 0.00 43.57 3.67
618 621 2.413963 GCGCACCCAATATGCACCA 61.414 57.895 0.30 0.00 43.57 4.17
619 622 2.412937 GCGCACCCAATATGCACC 59.587 61.111 0.30 0.00 43.57 5.01
620 623 2.340453 CTGGCGCACCCAATATGCAC 62.340 60.000 10.83 0.00 44.81 4.57
621 624 2.044551 TGGCGCACCCAATATGCA 60.045 55.556 10.83 0.00 43.57 3.96
622 625 1.383456 TTCTGGCGCACCCAATATGC 61.383 55.000 10.83 0.00 44.81 3.14
623 626 0.381801 GTTCTGGCGCACCCAATATG 59.618 55.000 10.83 0.00 44.81 1.78
624 627 0.751643 GGTTCTGGCGCACCCAATAT 60.752 55.000 10.83 0.00 44.81 1.28
625 628 1.377987 GGTTCTGGCGCACCCAATA 60.378 57.895 10.83 0.00 44.81 1.90
626 629 2.676471 GGTTCTGGCGCACCCAAT 60.676 61.111 10.83 0.00 44.81 3.16
631 634 4.373116 TCTCGGGTTCTGGCGCAC 62.373 66.667 10.83 0.00 0.00 5.34
632 635 4.069232 CTCTCGGGTTCTGGCGCA 62.069 66.667 10.83 0.00 0.00 6.09
634 637 4.069232 TGCTCTCGGGTTCTGGCG 62.069 66.667 0.00 0.00 0.00 5.69
635 638 2.435059 GTGCTCTCGGGTTCTGGC 60.435 66.667 0.00 0.00 0.00 4.85
636 639 2.111999 TTGGTGCTCTCGGGTTCTGG 62.112 60.000 0.00 0.00 0.00 3.86
637 640 0.671781 CTTGGTGCTCTCGGGTTCTG 60.672 60.000 0.00 0.00 0.00 3.02
638 641 1.122019 ACTTGGTGCTCTCGGGTTCT 61.122 55.000 0.00 0.00 0.00 3.01
639 642 0.250338 AACTTGGTGCTCTCGGGTTC 60.250 55.000 0.00 0.00 0.00 3.62
640 643 0.250338 GAACTTGGTGCTCTCGGGTT 60.250 55.000 0.00 0.00 0.00 4.11
641 644 1.371558 GAACTTGGTGCTCTCGGGT 59.628 57.895 0.00 0.00 0.00 5.28
642 645 1.376037 GGAACTTGGTGCTCTCGGG 60.376 63.158 0.00 0.00 0.00 5.14
643 646 1.376037 GGGAACTTGGTGCTCTCGG 60.376 63.158 0.00 0.00 0.00 4.63
644 647 0.036010 ATGGGAACTTGGTGCTCTCG 60.036 55.000 0.00 0.00 0.00 4.04
645 648 1.680249 GGATGGGAACTTGGTGCTCTC 60.680 57.143 0.00 0.00 0.00 3.20
646 649 0.329596 GGATGGGAACTTGGTGCTCT 59.670 55.000 0.00 0.00 0.00 4.09
647 650 0.681243 GGGATGGGAACTTGGTGCTC 60.681 60.000 0.00 0.00 0.00 4.26
648 651 1.384191 GGGATGGGAACTTGGTGCT 59.616 57.895 0.00 0.00 0.00 4.40
649 652 2.046285 CGGGATGGGAACTTGGTGC 61.046 63.158 0.00 0.00 0.00 5.01
650 653 0.392998 CTCGGGATGGGAACTTGGTG 60.393 60.000 0.00 0.00 0.00 4.17
651 654 1.991230 CTCGGGATGGGAACTTGGT 59.009 57.895 0.00 0.00 0.00 3.67
652 655 1.452108 GCTCGGGATGGGAACTTGG 60.452 63.158 0.00 0.00 0.00 3.61
653 656 0.830648 TAGCTCGGGATGGGAACTTG 59.169 55.000 0.00 0.00 0.00 3.16
654 657 1.694696 GATAGCTCGGGATGGGAACTT 59.305 52.381 0.00 0.00 0.00 2.66
655 658 1.133009 AGATAGCTCGGGATGGGAACT 60.133 52.381 0.00 0.00 0.00 3.01
656 659 1.343069 AGATAGCTCGGGATGGGAAC 58.657 55.000 0.00 0.00 0.00 3.62
657 660 2.103153 AAGATAGCTCGGGATGGGAA 57.897 50.000 0.00 0.00 0.00 3.97
658 661 2.808919 CTAAGATAGCTCGGGATGGGA 58.191 52.381 0.00 0.00 0.00 4.37
688 691 6.324819 CCCAGTGATGTGATAATGACAAAAC 58.675 40.000 0.00 0.00 0.00 2.43
689 692 5.105797 GCCCAGTGATGTGATAATGACAAAA 60.106 40.000 0.00 0.00 0.00 2.44
690 693 4.398988 GCCCAGTGATGTGATAATGACAAA 59.601 41.667 0.00 0.00 0.00 2.83
691 694 3.947196 GCCCAGTGATGTGATAATGACAA 59.053 43.478 0.00 0.00 0.00 3.18
693 696 2.545526 CGCCCAGTGATGTGATAATGAC 59.454 50.000 0.00 0.00 0.00 3.06
695 698 2.564771 ACGCCCAGTGATGTGATAATG 58.435 47.619 0.00 0.00 0.00 1.90
696 699 4.318332 CATACGCCCAGTGATGTGATAAT 58.682 43.478 0.00 0.00 0.00 1.28
697 700 3.727726 CATACGCCCAGTGATGTGATAA 58.272 45.455 0.00 0.00 0.00 1.75
698 701 2.547855 GCATACGCCCAGTGATGTGATA 60.548 50.000 0.00 0.00 0.00 2.15
699 702 1.811558 GCATACGCCCAGTGATGTGAT 60.812 52.381 0.00 0.00 0.00 3.06
700 703 0.461870 GCATACGCCCAGTGATGTGA 60.462 55.000 0.00 0.00 0.00 3.58
701 704 0.462581 AGCATACGCCCAGTGATGTG 60.463 55.000 0.00 0.00 39.83 3.21
702 705 0.462581 CAGCATACGCCCAGTGATGT 60.463 55.000 0.00 0.00 39.83 3.06
704 707 0.179073 GACAGCATACGCCCAGTGAT 60.179 55.000 0.00 0.00 39.83 3.06
708 711 2.203070 GGGACAGCATACGCCCAG 60.203 66.667 0.00 0.00 40.39 4.45
711 714 4.157120 ACGGGGACAGCATACGCC 62.157 66.667 0.00 0.00 39.83 5.68
713 716 2.202878 CCACGGGGACAGCATACG 60.203 66.667 0.00 0.00 35.59 3.06
714 717 3.305314 TCCACGGGGACAGCATAC 58.695 61.111 0.00 0.00 38.64 2.39
723 726 0.481567 TCTAGACCCTATCCACGGGG 59.518 60.000 0.00 0.00 46.40 5.73
725 728 2.085320 CGATCTAGACCCTATCCACGG 58.915 57.143 0.00 0.00 0.00 4.94
726 729 3.055209 TCGATCTAGACCCTATCCACG 57.945 52.381 0.00 0.00 0.00 4.94
727 730 4.158764 CCATTCGATCTAGACCCTATCCAC 59.841 50.000 0.00 0.00 0.00 4.02
728 731 4.044191 TCCATTCGATCTAGACCCTATCCA 59.956 45.833 0.00 0.00 0.00 3.41
729 732 4.601084 TCCATTCGATCTAGACCCTATCC 58.399 47.826 0.00 0.00 0.00 2.59
730 733 5.258051 ACTCCATTCGATCTAGACCCTATC 58.742 45.833 0.00 0.00 0.00 2.08
731 734 5.263872 ACTCCATTCGATCTAGACCCTAT 57.736 43.478 0.00 0.00 0.00 2.57
732 735 4.726035 ACTCCATTCGATCTAGACCCTA 57.274 45.455 0.00 0.00 0.00 3.53
733 736 3.603965 ACTCCATTCGATCTAGACCCT 57.396 47.619 0.00 0.00 0.00 4.34
745 748 4.907582 CGTGGTTTAAAACGAACTCCATTC 59.092 41.667 6.59 0.00 42.32 2.67
746 749 4.575645 TCGTGGTTTAAAACGAACTCCATT 59.424 37.500 11.64 0.00 45.14 3.16
747 750 4.128643 TCGTGGTTTAAAACGAACTCCAT 58.871 39.130 11.64 0.00 45.14 3.41
748 751 3.529533 TCGTGGTTTAAAACGAACTCCA 58.470 40.909 11.64 0.67 45.14 3.86
755 758 5.386933 GCACATGAATTCGTGGTTTAAAACG 60.387 40.000 27.13 6.16 41.11 3.60
756 759 5.689961 AGCACATGAATTCGTGGTTTAAAAC 59.310 36.000 27.13 0.00 40.78 2.43
758 761 5.009110 TGAGCACATGAATTCGTGGTTTAAA 59.991 36.000 27.13 9.18 43.46 1.52
759 762 4.517075 TGAGCACATGAATTCGTGGTTTAA 59.483 37.500 27.13 10.54 43.46 1.52
762 765 2.503331 TGAGCACATGAATTCGTGGTT 58.497 42.857 27.13 15.94 43.46 3.67
763 766 2.183478 TGAGCACATGAATTCGTGGT 57.817 45.000 27.13 21.09 45.91 4.16
764 767 3.431856 CAATGAGCACATGAATTCGTGG 58.568 45.455 27.13 18.17 37.19 4.94
765 768 2.850060 GCAATGAGCACATGAATTCGTG 59.150 45.455 23.25 23.25 44.79 4.35
766 769 3.141002 GCAATGAGCACATGAATTCGT 57.859 42.857 0.00 0.00 44.79 3.85
778 781 5.810587 AGATTGATGTTCATTTGCAATGAGC 59.189 36.000 0.00 9.07 45.96 4.26
780 783 7.873505 TGAAAGATTGATGTTCATTTGCAATGA 59.126 29.630 0.00 3.67 30.06 2.57
781 784 8.024146 TGAAAGATTGATGTTCATTTGCAATG 57.976 30.769 0.00 1.04 30.06 2.82
782 785 8.610248 TTGAAAGATTGATGTTCATTTGCAAT 57.390 26.923 0.00 0.00 31.66 3.56
785 788 7.332430 TGGATTGAAAGATTGATGTTCATTTGC 59.668 33.333 0.00 0.00 31.66 3.68
787 790 9.378551 CATGGATTGAAAGATTGATGTTCATTT 57.621 29.630 0.00 0.00 31.66 2.32
788 791 8.755028 TCATGGATTGAAAGATTGATGTTCATT 58.245 29.630 0.00 0.00 31.66 2.57
789 792 8.301252 TCATGGATTGAAAGATTGATGTTCAT 57.699 30.769 0.00 0.00 31.66 2.57
790 793 7.706100 TCATGGATTGAAAGATTGATGTTCA 57.294 32.000 0.00 0.00 0.00 3.18
791 794 8.991243 TTTCATGGATTGAAAGATTGATGTTC 57.009 30.769 0.00 0.00 46.80 3.18
803 806 3.694072 GGGTGTCGATTTCATGGATTGAA 59.306 43.478 0.00 0.00 42.62 2.69
804 807 3.054434 AGGGTGTCGATTTCATGGATTGA 60.054 43.478 0.00 0.00 0.00 2.57
805 808 3.282021 AGGGTGTCGATTTCATGGATTG 58.718 45.455 0.00 0.00 0.00 2.67
806 809 3.652057 AGGGTGTCGATTTCATGGATT 57.348 42.857 0.00 0.00 0.00 3.01
807 810 4.982241 ATAGGGTGTCGATTTCATGGAT 57.018 40.909 0.00 0.00 0.00 3.41
809 812 5.215252 AGTATAGGGTGTCGATTTCATGG 57.785 43.478 0.00 0.00 0.00 3.66
810 813 5.842907 TGAGTATAGGGTGTCGATTTCATG 58.157 41.667 0.00 0.00 0.00 3.07
812 815 5.925506 TTGAGTATAGGGTGTCGATTTCA 57.074 39.130 0.00 0.00 0.00 2.69
813 816 9.490379 AAATATTGAGTATAGGGTGTCGATTTC 57.510 33.333 0.00 0.00 0.00 2.17
815 818 8.647796 TGAAATATTGAGTATAGGGTGTCGATT 58.352 33.333 0.00 0.00 0.00 3.34
816 819 8.190326 TGAAATATTGAGTATAGGGTGTCGAT 57.810 34.615 0.00 0.00 0.00 3.59
818 821 7.926555 ACTTGAAATATTGAGTATAGGGTGTCG 59.073 37.037 0.00 0.00 0.00 4.35
819 822 9.614792 AACTTGAAATATTGAGTATAGGGTGTC 57.385 33.333 0.00 0.00 0.00 3.67
834 837 9.320295 TCCAGGGTCAAAATTAACTTGAAATAT 57.680 29.630 3.92 0.00 34.68 1.28
835 838 8.581578 GTCCAGGGTCAAAATTAACTTGAAATA 58.418 33.333 3.92 0.00 34.68 1.40
836 839 7.441836 GTCCAGGGTCAAAATTAACTTGAAAT 58.558 34.615 3.92 0.00 34.68 2.17
837 840 6.183360 GGTCCAGGGTCAAAATTAACTTGAAA 60.183 38.462 3.92 0.00 34.68 2.69
838 841 5.303333 GGTCCAGGGTCAAAATTAACTTGAA 59.697 40.000 3.92 0.00 34.68 2.69
839 842 4.830600 GGTCCAGGGTCAAAATTAACTTGA 59.169 41.667 0.00 0.00 0.00 3.02
840 843 4.021456 GGGTCCAGGGTCAAAATTAACTTG 60.021 45.833 0.00 0.00 0.00 3.16
841 844 4.157246 GGGTCCAGGGTCAAAATTAACTT 58.843 43.478 0.00 0.00 0.00 2.66
842 845 3.141272 TGGGTCCAGGGTCAAAATTAACT 59.859 43.478 0.00 0.00 0.00 2.24
843 846 3.502356 TGGGTCCAGGGTCAAAATTAAC 58.498 45.455 0.00 0.00 0.00 2.01
844 847 3.773560 CTGGGTCCAGGGTCAAAATTAA 58.226 45.455 9.08 0.00 40.17 1.40
845 848 2.556559 GCTGGGTCCAGGGTCAAAATTA 60.557 50.000 17.67 0.00 43.77 1.40
846 849 1.827245 GCTGGGTCCAGGGTCAAAATT 60.827 52.381 17.67 0.00 43.77 1.82
847 850 0.251787 GCTGGGTCCAGGGTCAAAAT 60.252 55.000 17.67 0.00 43.77 1.82
848 851 1.152830 GCTGGGTCCAGGGTCAAAA 59.847 57.895 17.67 0.00 43.77 2.44
849 852 1.774217 AGCTGGGTCCAGGGTCAAA 60.774 57.895 17.67 0.00 43.77 2.69
850 853 2.121963 AGCTGGGTCCAGGGTCAA 60.122 61.111 17.67 0.00 43.77 3.18
851 854 2.607750 GAGCTGGGTCCAGGGTCA 60.608 66.667 17.67 0.00 43.77 4.02
852 855 3.403558 GGAGCTGGGTCCAGGGTC 61.404 72.222 17.67 12.62 43.77 4.46
856 859 3.775654 GACCGGAGCTGGGTCCAG 61.776 72.222 18.68 12.42 46.65 3.86
860 863 2.997897 GTCAGACCGGAGCTGGGT 60.998 66.667 22.50 5.75 41.48 4.51
861 864 4.135153 CGTCAGACCGGAGCTGGG 62.135 72.222 22.50 14.23 34.20 4.45
862 865 3.057547 CTCGTCAGACCGGAGCTGG 62.058 68.421 22.50 11.90 34.20 4.85
863 866 2.336478 ACTCGTCAGACCGGAGCTG 61.336 63.158 9.46 15.71 34.71 4.24
864 867 2.034376 ACTCGTCAGACCGGAGCT 59.966 61.111 9.46 1.09 0.00 4.09
865 868 2.179517 CACTCGTCAGACCGGAGC 59.820 66.667 9.46 0.00 0.00 4.70
866 869 1.210413 CACACTCGTCAGACCGGAG 59.790 63.158 9.46 0.00 0.00 4.63
867 870 2.265904 CCACACTCGTCAGACCGGA 61.266 63.158 9.46 0.00 0.00 5.14
868 871 2.258591 CCACACTCGTCAGACCGG 59.741 66.667 0.00 0.00 0.00 5.28
869 872 2.430921 GCCACACTCGTCAGACCG 60.431 66.667 0.00 0.00 0.00 4.79
870 873 2.048127 GGCCACACTCGTCAGACC 60.048 66.667 0.00 0.00 0.00 3.85
871 874 1.080434 GAGGCCACACTCGTCAGAC 60.080 63.158 5.01 0.00 0.00 3.51
872 875 1.228583 AGAGGCCACACTCGTCAGA 60.229 57.895 5.01 0.00 42.31 3.27
873 876 1.080230 CAGAGGCCACACTCGTCAG 60.080 63.158 5.01 0.00 42.31 3.51
874 877 3.051210 CAGAGGCCACACTCGTCA 58.949 61.111 5.01 0.00 42.31 4.35
875 878 2.433318 GCAGAGGCCACACTCGTC 60.433 66.667 5.01 0.00 42.31 4.20
885 888 1.028868 GTGTTGGATGAGGCAGAGGC 61.029 60.000 0.00 0.00 40.13 4.70
886 889 0.393537 GGTGTTGGATGAGGCAGAGG 60.394 60.000 0.00 0.00 0.00 3.69
887 890 0.617413 AGGTGTTGGATGAGGCAGAG 59.383 55.000 0.00 0.00 0.00 3.35
888 891 1.067295 AAGGTGTTGGATGAGGCAGA 58.933 50.000 0.00 0.00 0.00 4.26
889 892 1.171308 CAAGGTGTTGGATGAGGCAG 58.829 55.000 0.00 0.00 0.00 4.85
890 893 0.770499 TCAAGGTGTTGGATGAGGCA 59.230 50.000 0.00 0.00 34.09 4.75
891 894 1.003580 TCTCAAGGTGTTGGATGAGGC 59.996 52.381 0.00 0.00 39.74 4.70
892 895 3.341823 CTTCTCAAGGTGTTGGATGAGG 58.658 50.000 0.00 0.00 39.74 3.86
893 896 3.341823 CCTTCTCAAGGTGTTGGATGAG 58.658 50.000 0.00 0.00 43.95 2.90
894 897 3.423539 CCTTCTCAAGGTGTTGGATGA 57.576 47.619 0.00 0.00 43.95 2.92
904 907 9.794828 TGAACTGAATTCCACTCCTTCTCAAGG 62.795 44.444 2.27 0.00 42.44 3.61
905 908 4.904241 ACTGAATTCCACTCCTTCTCAAG 58.096 43.478 2.27 0.00 0.00 3.02
906 909 4.982241 ACTGAATTCCACTCCTTCTCAA 57.018 40.909 2.27 0.00 0.00 3.02
917 920 2.957402 ACCTGCTGAACTGAATTCCA 57.043 45.000 2.27 0.00 36.36 3.53
927 930 2.224499 TGCTGTCAATGTACCTGCTGAA 60.224 45.455 0.00 0.00 0.00 3.02
928 931 1.347378 TGCTGTCAATGTACCTGCTGA 59.653 47.619 0.00 0.00 0.00 4.26
929 932 1.812235 TGCTGTCAATGTACCTGCTG 58.188 50.000 0.00 0.00 0.00 4.41
930 933 2.566833 TTGCTGTCAATGTACCTGCT 57.433 45.000 0.00 0.00 0.00 4.24
931 934 3.012518 AGATTGCTGTCAATGTACCTGC 58.987 45.455 2.78 0.00 42.60 4.85
932 935 4.696877 TGAAGATTGCTGTCAATGTACCTG 59.303 41.667 2.78 0.00 42.60 4.00
933 936 4.910195 TGAAGATTGCTGTCAATGTACCT 58.090 39.130 2.78 0.00 42.60 3.08
934 937 4.437930 GCTGAAGATTGCTGTCAATGTACC 60.438 45.833 2.78 0.00 42.60 3.34
941 944 3.057104 CCAAATGCTGAAGATTGCTGTCA 60.057 43.478 0.00 0.00 0.00 3.58
949 952 5.075493 AGAACTTGACCAAATGCTGAAGAT 58.925 37.500 0.00 0.00 0.00 2.40
957 960 4.083484 GGAACGGTAGAACTTGACCAAATG 60.083 45.833 0.00 0.00 35.26 2.32
966 969 0.037605 CGGCTGGAACGGTAGAACTT 60.038 55.000 0.00 0.00 36.83 2.66
967 970 0.896940 TCGGCTGGAACGGTAGAACT 60.897 55.000 0.00 0.00 36.83 3.01
1320 1329 4.074526 GCGAGGCAGGTGCAGAGA 62.075 66.667 4.01 0.00 44.36 3.10
1494 1504 1.558294 GTCCAGGAAACCTTATCCGGT 59.442 52.381 0.00 0.00 42.03 5.28
1560 1570 1.766494 TGGCATGGAAGCAATCGATT 58.234 45.000 4.39 4.39 35.83 3.34
1566 1576 1.894512 CAGCATGGCATGGAAGCAA 59.105 52.632 27.48 0.00 35.83 3.91
1652 1662 1.663379 CCACATACCGAGACCGAGCA 61.663 60.000 0.00 0.00 38.22 4.26
1701 1711 1.153086 GATGCGGATGTTGCCCTCT 60.153 57.895 0.00 0.00 0.00 3.69
2010 2026 1.068250 GTAGTGCTCCATCCTCGCC 59.932 63.158 0.00 0.00 0.00 5.54
2154 2170 2.363975 GGCCATGTCCACGTCCCTA 61.364 63.158 0.00 0.00 0.00 3.53
2155 2171 3.717294 GGCCATGTCCACGTCCCT 61.717 66.667 0.00 0.00 0.00 4.20
2214 2230 0.386858 GCAGCACGTAGTTCGAGTCA 60.387 55.000 0.00 0.00 41.61 3.41
2250 2266 2.375345 ATCCCATTTCCCGACGGCT 61.375 57.895 8.86 0.00 0.00 5.52
2356 2372 1.026718 CCCCCGCAGACAAACTCATC 61.027 60.000 0.00 0.00 0.00 2.92
2471 2487 2.357517 AAACAGGCAGTCGCTCCG 60.358 61.111 0.00 0.00 38.60 4.63
2480 2535 2.161855 CCAGTATTCTGCAAACAGGCA 58.838 47.619 0.00 0.00 44.59 4.75
2481 2536 2.421424 CTCCAGTATTCTGCAAACAGGC 59.579 50.000 0.00 0.00 44.59 4.85
2482 2537 3.012518 CCTCCAGTATTCTGCAAACAGG 58.987 50.000 0.00 0.00 44.59 4.00
2483 2538 2.421424 GCCTCCAGTATTCTGCAAACAG 59.579 50.000 0.00 0.00 45.95 3.16
2484 2539 2.040278 AGCCTCCAGTATTCTGCAAACA 59.960 45.455 0.00 0.00 40.09 2.83
2485 2540 2.716217 AGCCTCCAGTATTCTGCAAAC 58.284 47.619 0.00 0.00 40.09 2.93
2486 2541 3.439857 AAGCCTCCAGTATTCTGCAAA 57.560 42.857 0.00 0.00 40.09 3.68
2487 2542 3.244875 TGAAAGCCTCCAGTATTCTGCAA 60.245 43.478 0.00 0.00 40.09 4.08
2516 2571 1.856265 CTTGAAACACCGAGCCTGGC 61.856 60.000 11.65 11.65 0.00 4.85
2539 2594 3.635373 TGATCTACCAGTAGCCTTTACGG 59.365 47.826 0.00 0.00 33.32 4.02
2630 2880 2.700371 CCTGTATGGCTGTATCTGGACA 59.300 50.000 0.00 0.00 0.00 4.02
2643 2893 2.681706 GTGATCTCATCGCCTGTATGG 58.318 52.381 0.00 0.00 39.35 2.74
2644 2894 2.287849 ACGTGATCTCATCGCCTGTATG 60.288 50.000 0.00 0.00 36.46 2.39
2673 2925 6.375736 TCTCATCTGTTGACGTATCTTCTTCT 59.624 38.462 0.00 0.00 0.00 2.85
2676 2928 6.151985 ACTTCTCATCTGTTGACGTATCTTCT 59.848 38.462 0.00 0.00 0.00 2.85
2677 2929 6.326375 ACTTCTCATCTGTTGACGTATCTTC 58.674 40.000 0.00 0.00 0.00 2.87
2678 2930 6.274157 ACTTCTCATCTGTTGACGTATCTT 57.726 37.500 0.00 0.00 0.00 2.40
2679 2931 5.906113 ACTTCTCATCTGTTGACGTATCT 57.094 39.130 0.00 0.00 0.00 1.98
2680 2932 7.418408 TGATACTTCTCATCTGTTGACGTATC 58.582 38.462 16.01 16.01 36.13 2.24
2737 4440 2.297315 TGAGATGAGCATCCGATGGTAC 59.703 50.000 12.98 8.07 41.77 3.34
2874 5504 8.556194 CGGGTGATATAATCGAAGAAAAATGAA 58.444 33.333 0.00 0.00 43.58 2.57
2875 5505 7.713507 ACGGGTGATATAATCGAAGAAAAATGA 59.286 33.333 0.00 0.00 43.58 2.57
2876 5506 7.861630 ACGGGTGATATAATCGAAGAAAAATG 58.138 34.615 0.00 0.00 43.58 2.32
2936 5866 7.724305 TGGAAGTGAGTACTGTTATTGTTTC 57.276 36.000 0.00 0.00 37.19 2.78
2953 5883 5.587443 TCTGACAGCAATGAATATGGAAGTG 59.413 40.000 0.00 0.00 0.00 3.16
2992 5974 4.415881 TGAAAGAGTAGGTGAGCACAAA 57.584 40.909 2.75 0.00 0.00 2.83
3043 6031 5.682862 GGCGAGAAAAATTGTGCACATATAG 59.317 40.000 22.39 4.03 0.00 1.31
3047 6035 2.297033 AGGCGAGAAAAATTGTGCACAT 59.703 40.909 22.39 4.67 0.00 3.21
3056 6044 6.594159 CCGTTGGATATATAGGCGAGAAAAAT 59.406 38.462 0.00 0.00 0.00 1.82
3117 6135 5.010213 GGAAATGCTTGTTTGGGTGTAACTA 59.990 40.000 0.00 0.00 36.74 2.24
3162 6180 7.201767 CCAATCTATAGAGAAGGCCTTTTTGTG 60.202 40.741 21.54 7.41 34.61 3.33
3271 6323 7.764443 TGATCCTTTTCGTCTTACTCCAAATAG 59.236 37.037 0.00 0.00 0.00 1.73
3315 6367 0.108992 CATGGACGCAAGCAAAGCAT 60.109 50.000 0.00 0.00 45.62 3.79
3336 6388 7.342026 ACTGTTGGTTCTTTTCCTCTTATGTTT 59.658 33.333 0.00 0.00 0.00 2.83
3372 6424 6.018180 ACCAAAGAACTGAAGATACGACAAAC 60.018 38.462 0.00 0.00 0.00 2.93
3378 6430 5.230942 AGTGACCAAAGAACTGAAGATACG 58.769 41.667 0.00 0.00 0.00 3.06
3404 6456 3.814842 TGTAAATGCAACTGGAGTCACAG 59.185 43.478 0.00 6.98 44.03 3.66
3408 6460 5.874810 TGATACTGTAAATGCAACTGGAGTC 59.125 40.000 0.00 0.00 0.00 3.36
3422 6474 7.394016 TCTTTTCAGCCTTCATGATACTGTAA 58.606 34.615 15.67 11.61 0.00 2.41
3437 6489 4.789012 TCATGTTGGATTCTTTTCAGCC 57.211 40.909 0.00 0.00 0.00 4.85
3438 6490 5.531634 TGTTCATGTTGGATTCTTTTCAGC 58.468 37.500 0.00 0.00 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.