Multiple sequence alignment - TraesCS6B01G357900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G357900 chr6B 100.000 6906 0 0 1 6906 626211094 626217999 0.000000e+00 12754.0
1 TraesCS6B01G357900 chr6B 95.905 1221 44 4 4256 5474 416910991 416909775 0.000000e+00 1973.0
2 TraesCS6B01G357900 chr6B 87.429 1233 138 7 4256 5474 506542991 506544220 0.000000e+00 1402.0
3 TraesCS6B01G357900 chr6B 96.429 560 19 1 4916 5475 518593429 518592871 0.000000e+00 922.0
4 TraesCS6B01G357900 chr6B 91.403 221 16 2 607 824 435581831 435582051 4.050000e-77 300.0
5 TraesCS6B01G357900 chr6B 89.787 235 21 3 597 828 687954128 687953894 1.460000e-76 298.0
6 TraesCS6B01G357900 chr6B 89.868 227 21 2 607 832 148068678 148068453 2.440000e-74 291.0
7 TraesCS6B01G357900 chr6B 96.053 76 1 1 4744 4817 518593504 518593429 9.410000e-24 122.0
8 TraesCS6B01G357900 chr4D 95.990 1596 51 10 2671 4257 25695123 25693532 0.000000e+00 2580.0
9 TraesCS6B01G357900 chr4D 87.112 1451 100 35 2316 3743 5683948 5685334 0.000000e+00 1563.0
10 TraesCS6B01G357900 chr4D 88.053 837 56 15 5472 6296 25693531 25692727 0.000000e+00 952.0
11 TraesCS6B01G357900 chr4D 87.293 724 66 20 5587 6296 5685337 5686048 0.000000e+00 804.0
12 TraesCS6B01G357900 chr4D 90.950 221 20 0 607 827 12036528 12036308 1.460000e-76 298.0
13 TraesCS6B01G357900 chr4D 85.551 263 20 6 2610 2854 182470964 182470702 6.870000e-65 259.0
14 TraesCS6B01G357900 chr4D 89.418 189 12 3 1042 1222 5683734 5683922 1.500000e-56 231.0
15 TraesCS6B01G357900 chr4D 80.422 332 40 20 2293 2614 25695546 25695230 5.390000e-56 230.0
16 TraesCS6B01G357900 chr4D 89.172 157 13 2 943 1095 25696035 25695879 7.070000e-45 193.0
17 TraesCS6B01G357900 chr4D 75.457 383 41 24 6339 6673 215457745 215458122 3.360000e-28 137.0
18 TraesCS6B01G357900 chr4D 82.143 140 22 3 6552 6691 484684920 484684784 4.380000e-22 117.0
19 TraesCS6B01G357900 chr4D 80.282 142 25 3 6551 6691 126895704 126895565 3.410000e-18 104.0
20 TraesCS6B01G357900 chr4D 82.759 116 18 1 6551 6666 490889236 490889349 1.230000e-17 102.0
21 TraesCS6B01G357900 chr4D 97.297 37 1 0 6504 6540 423882077 423882041 5.780000e-06 63.9
22 TraesCS6B01G357900 chr4D 94.595 37 2 0 6504 6540 491394850 491394814 2.690000e-04 58.4
23 TraesCS6B01G357900 chr4D 100.000 29 0 0 6714 6742 5686079 5686107 3.000000e-03 54.7
24 TraesCS6B01G357900 chr4D 100.000 29 0 0 6714 6742 25692696 25692668 3.000000e-03 54.7
25 TraesCS6B01G357900 chr4A 95.611 1595 58 9 2671 4257 692385256 692383666 0.000000e+00 2547.0
26 TraesCS6B01G357900 chr4A 96.701 1061 33 2 1229 2289 5408691 5407633 0.000000e+00 1764.0
27 TraesCS6B01G357900 chr4A 96.692 1058 33 2 1233 2290 94991636 94992691 0.000000e+00 1759.0
28 TraesCS6B01G357900 chr4A 88.076 1107 67 27 5472 6543 692383665 692382589 0.000000e+00 1253.0
29 TraesCS6B01G357900 chr4A 87.633 283 20 6 6626 6906 692382590 692382321 1.450000e-81 315.0
30 TraesCS6B01G357900 chr4A 93.785 177 11 0 5873 6049 597837387 597837211 4.110000e-67 267.0
31 TraesCS6B01G357900 chr4A 82.372 312 35 17 2293 2600 692385665 692385370 3.200000e-63 254.0
32 TraesCS6B01G357900 chr4A 83.737 289 23 15 943 1214 692385966 692385685 1.150000e-62 252.0
33 TraesCS6B01G357900 chr4A 93.750 112 4 2 5487 5595 597837505 597837394 1.540000e-36 165.0
34 TraesCS6B01G357900 chr4A 95.062 81 4 0 2863 2943 687562684 687562604 2.020000e-25 128.0
35 TraesCS6B01G357900 chr7A 95.438 1600 58 10 2671 4257 32632326 32630729 0.000000e+00 2536.0
36 TraesCS6B01G357900 chr7A 98.115 1061 16 3 1232 2290 31598768 31597710 0.000000e+00 1845.0
37 TraesCS6B01G357900 chr7A 96.604 1060 34 2 1230 2289 129870962 129869905 0.000000e+00 1757.0
38 TraesCS6B01G357900 chr7A 90.507 1222 88 8 4256 5475 717328605 717329800 0.000000e+00 1589.0
39 TraesCS6B01G357900 chr7A 88.374 1101 66 25 5472 6543 32630728 32629661 0.000000e+00 1267.0
40 TraesCS6B01G357900 chr7A 84.512 297 22 12 943 1222 32633036 32632747 8.830000e-69 272.0
41 TraesCS6B01G357900 chr7A 80.802 349 41 23 2293 2633 32632741 32632411 4.140000e-62 250.0
42 TraesCS6B01G357900 chr7A 81.538 130 19 3 6626 6755 32629662 32629538 1.230000e-17 102.0
43 TraesCS6B01G357900 chr7A 95.082 61 3 0 6762 6822 32629250 32629190 5.700000e-16 97.1
44 TraesCS6B01G357900 chr7D 95.438 1600 56 12 2671 4257 32609015 32607420 0.000000e+00 2534.0
45 TraesCS6B01G357900 chr7D 89.348 1089 60 21 5472 6543 32607419 32606370 0.000000e+00 1317.0
46 TraesCS6B01G357900 chr7D 77.697 547 102 16 4940 5475 47185988 47186525 4.020000e-82 316.0
47 TraesCS6B01G357900 chr7D 84.899 298 23 11 943 1222 32609745 32609452 1.470000e-71 281.0
48 TraesCS6B01G357900 chr7D 81.899 337 37 22 2293 2623 32609446 32609128 5.310000e-66 263.0
49 TraesCS6B01G357900 chr7D 71.014 1242 320 37 4256 5473 558184754 558183529 5.310000e-66 263.0
50 TraesCS6B01G357900 chr7D 88.701 177 7 4 6735 6906 32606287 32606119 3.270000e-48 204.0
51 TraesCS6B01G357900 chr7D 82.639 144 20 4 6551 6691 630308079 630307938 9.410000e-24 122.0
52 TraesCS6B01G357900 chr7D 82.857 140 19 2 6551 6690 66707749 66707883 3.380000e-23 121.0
53 TraesCS6B01G357900 chr7D 80.851 141 25 2 6551 6691 616253515 616253377 7.320000e-20 110.0
54 TraesCS6B01G357900 chr7D 81.061 132 17 6 6341 6466 582058117 582057988 1.590000e-16 99.0
55 TraesCS6B01G357900 chr4B 94.881 1602 57 15 2671 4257 38027708 38026117 0.000000e+00 2481.0
56 TraesCS6B01G357900 chr4B 83.591 1231 186 15 4256 5474 311201607 311202833 0.000000e+00 1140.0
57 TraesCS6B01G357900 chr4B 90.659 835 61 14 5472 6296 38026116 38025289 0.000000e+00 1094.0
58 TraesCS6B01G357900 chr4B 92.491 546 26 11 5607 6139 9948276 9948819 0.000000e+00 767.0
59 TraesCS6B01G357900 chr4B 89.017 346 16 10 6322 6652 9949039 9949377 6.450000e-110 409.0
60 TraesCS6B01G357900 chr4B 81.327 407 58 12 5084 5475 580322573 580322976 1.450000e-81 315.0
61 TraesCS6B01G357900 chr4B 86.054 294 23 11 943 1222 38028424 38028135 4.050000e-77 300.0
62 TraesCS6B01G357900 chr4B 83.721 301 29 15 2293 2592 38028129 38027848 4.110000e-67 267.0
63 TraesCS6B01G357900 chr4B 98.000 150 3 0 6174 6323 9948819 9948968 1.910000e-65 261.0
64 TraesCS6B01G357900 chr4B 91.892 185 10 2 6714 6896 9949510 9949691 3.200000e-63 254.0
65 TraesCS6B01G357900 chr4B 94.231 104 5 1 3334 3437 9948089 9947987 2.580000e-34 158.0
66 TraesCS6B01G357900 chr5B 96.148 1220 42 3 4256 5473 44245512 44244296 0.000000e+00 1988.0
67 TraesCS6B01G357900 chr5B 98.108 1057 19 1 1232 2288 567583752 567582697 0.000000e+00 1840.0
68 TraesCS6B01G357900 chr5B 87.308 1237 133 10 4256 5474 171733996 171735226 0.000000e+00 1393.0
69 TraesCS6B01G357900 chr5B 85.425 1235 159 12 4256 5474 454286235 454287464 0.000000e+00 1264.0
70 TraesCS6B01G357900 chr5B 76.031 388 52 19 6343 6691 570938597 570938212 5.540000e-36 163.0
71 TraesCS6B01G357900 chr5B 75.871 402 42 30 6340 6691 659585630 659586026 3.340000e-33 154.0
72 TraesCS6B01G357900 chr5B 76.042 192 22 13 6495 6684 12574820 12574989 2.070000e-10 78.7
73 TraesCS6B01G357900 chr5A 96.783 1057 30 4 1232 2288 573654373 573653321 0.000000e+00 1760.0
74 TraesCS6B01G357900 chr5A 77.157 394 40 27 6341 6691 656051220 656051606 4.250000e-42 183.0
75 TraesCS6B01G357900 chr1A 96.692 1058 31 3 1232 2289 477036148 477037201 0.000000e+00 1757.0
76 TraesCS6B01G357900 chr1A 96.597 1058 34 2 1232 2289 499619255 499618200 0.000000e+00 1753.0
77 TraesCS6B01G357900 chr1A 87.745 1224 136 8 4256 5474 442630429 442631643 0.000000e+00 1417.0
78 TraesCS6B01G357900 chr1A 83.803 142 19 4 6551 6691 497340151 497340289 1.560000e-26 132.0
79 TraesCS6B01G357900 chr1A 95.000 80 4 0 2861 2940 379468713 379468792 7.270000e-25 126.0
80 TraesCS6B01G357900 chr1A 74.766 321 32 24 6342 6615 511011779 511011461 1.590000e-16 99.0
81 TraesCS6B01G357900 chr1A 100.000 37 0 0 6504 6540 508626962 508626926 1.240000e-07 69.4
82 TraesCS6B01G357900 chr3A 95.985 1071 41 2 1228 2297 522620707 522619638 0.000000e+00 1738.0
83 TraesCS6B01G357900 chr3A 78.554 1231 244 19 4259 5473 460143594 460142368 0.000000e+00 793.0
84 TraesCS6B01G357900 chr3A 89.000 200 22 0 4054 4253 651640693 651640494 1.490000e-61 248.0
85 TraesCS6B01G357900 chr3A 95.745 47 2 0 6495 6541 243999961 244000007 7.430000e-10 76.8
86 TraesCS6B01G357900 chr2A 87.715 1221 130 12 4256 5473 139933307 139932104 0.000000e+00 1406.0
87 TraesCS6B01G357900 chr2A 87.710 1131 125 9 4351 5475 424165966 424167088 0.000000e+00 1306.0
88 TraesCS6B01G357900 chr2A 83.571 140 17 4 6553 6691 47791987 47791853 7.270000e-25 126.0
89 TraesCS6B01G357900 chr2A 74.731 372 41 26 6344 6666 751491999 751491632 4.380000e-22 117.0
90 TraesCS6B01G357900 chr1D 80.857 747 131 10 4734 5475 347280917 347280178 1.670000e-160 577.0
91 TraesCS6B01G357900 chr1D 81.960 449 81 0 4259 4707 347286285 347285837 1.410000e-101 381.0
92 TraesCS6B01G357900 chr1D 86.150 361 29 11 2512 2854 145884659 145885016 3.040000e-98 370.0
93 TraesCS6B01G357900 chr1D 84.411 263 22 11 2610 2854 82976557 82976296 2.490000e-59 241.0
94 TraesCS6B01G357900 chr1D 92.222 90 6 1 6551 6640 376255518 376255606 7.270000e-25 126.0
95 TraesCS6B01G357900 chr1D 82.979 141 22 2 6552 6691 401286310 401286449 7.270000e-25 126.0
96 TraesCS6B01G357900 chr1D 74.387 367 51 23 6343 6675 454307120 454306763 4.380000e-22 117.0
97 TraesCS6B01G357900 chr1D 81.690 142 24 2 6551 6691 460919362 460919502 4.380000e-22 117.0
98 TraesCS6B01G357900 chr1D 78.873 142 27 2 6551 6691 412073186 412073047 7.380000e-15 93.5
99 TraesCS6B01G357900 chr1D 78.676 136 25 3 6553 6687 203869741 203869873 3.430000e-13 87.9
100 TraesCS6B01G357900 chr1D 75.648 193 34 8 6495 6675 402123415 402123224 4.440000e-12 84.2
101 TraesCS6B01G357900 chr1D 93.750 48 2 1 6494 6540 135395969 135396016 3.460000e-08 71.3
102 TraesCS6B01G357900 chr1D 97.500 40 1 0 6576 6615 440403120 440403081 1.240000e-07 69.4
103 TraesCS6B01G357900 chr3B 77.846 650 86 28 3627 4253 680750438 680751052 3.960000e-92 350.0
104 TraesCS6B01G357900 chr3B 81.416 452 58 14 3146 3590 680749907 680750339 5.130000e-91 346.0
105 TraesCS6B01G357900 chr3B 80.312 320 48 14 5165 5474 463487925 463487611 1.940000e-55 228.0
106 TraesCS6B01G357900 chr3B 81.111 180 25 7 943 1116 680748847 680749023 1.210000e-27 135.0
107 TraesCS6B01G357900 chr3B 81.871 171 18 9 6338 6498 526735578 526735411 1.560000e-26 132.0
108 TraesCS6B01G357900 chr3B 79.042 167 21 9 6343 6498 151119481 151119318 1.230000e-17 102.0
109 TraesCS6B01G357900 chr1B 92.593 216 15 1 608 823 304122945 304122731 6.730000e-80 309.0
110 TraesCS6B01G357900 chr1B 90.171 234 21 2 598 829 651566499 651566732 3.130000e-78 303.0
111 TraesCS6B01G357900 chr1B 96.154 78 3 0 2863 2940 35096862 35096939 2.020000e-25 128.0
112 TraesCS6B01G357900 chr1B 82.270 141 17 6 6553 6691 390379090 390379224 1.570000e-21 115.0
113 TraesCS6B01G357900 chr1B 76.824 233 24 15 6337 6540 221562680 221562449 3.410000e-18 104.0
114 TraesCS6B01G357900 chr3D 91.480 223 19 0 602 824 595711389 595711611 2.420000e-79 307.0
115 TraesCS6B01G357900 chr3D 91.324 219 18 1 607 825 103628190 103627973 1.460000e-76 298.0
116 TraesCS6B01G357900 chr3D 85.551 263 20 6 2610 2854 494379406 494379144 6.870000e-65 259.0
117 TraesCS6B01G357900 chr3D 85.171 263 21 6 2610 2854 495015820 495015558 3.200000e-63 254.0
118 TraesCS6B01G357900 chr3D 76.131 398 39 24 6341 6691 548716556 548716168 2.580000e-34 158.0
119 TraesCS6B01G357900 chr3D 82.014 139 20 4 6551 6687 45408352 45408487 5.660000e-21 113.0
120 TraesCS6B01G357900 chr3D 74.845 322 40 19 6343 6625 301772345 301772664 2.630000e-19 108.0
121 TraesCS6B01G357900 chr3D 73.697 403 45 31 6343 6691 318514058 318513663 4.410000e-17 100.0
122 TraesCS6B01G357900 chr3D 93.846 65 4 0 6551 6615 4992265 4992329 1.590000e-16 99.0
123 TraesCS6B01G357900 chr3D 92.683 41 3 0 4 44 546392217 546392177 7.480000e-05 60.2
124 TraesCS6B01G357900 chr2D 92.488 213 12 2 608 820 431968287 431968495 1.130000e-77 302.0
125 TraesCS6B01G357900 chr2D 76.501 383 44 19 6343 6684 37826652 37826275 4.280000e-37 167.0
126 TraesCS6B01G357900 chr2D 87.912 91 11 0 6551 6641 526159318 526159408 2.630000e-19 108.0
127 TraesCS6B01G357900 chr2D 94.030 67 4 0 6551 6617 544570552 544570618 1.230000e-17 102.0
128 TraesCS6B01G357900 chr2D 86.813 91 12 0 6551 6641 547148447 547148537 1.230000e-17 102.0
129 TraesCS6B01G357900 chr2D 79.433 141 25 2 6551 6691 649653257 649653393 5.700000e-16 97.1
130 TraesCS6B01G357900 chr5D 85.551 263 20 6 2610 2854 485215673 485215411 6.870000e-65 259.0
131 TraesCS6B01G357900 chr5D 82.143 168 16 11 6343 6498 7021709 7021544 1.560000e-26 132.0
132 TraesCS6B01G357900 chr5D 75.312 320 33 23 6343 6617 232006264 232006582 2.040000e-20 111.0
133 TraesCS6B01G357900 chr5D 91.489 47 3 1 6495 6540 438608688 438608642 5.780000e-06 63.9
134 TraesCS6B01G357900 chr7B 87.302 126 15 1 6551 6676 608378556 608378680 7.220000e-30 143.0
135 TraesCS6B01G357900 chr7B 95.062 81 4 0 2863 2943 747303738 747303658 2.020000e-25 128.0
136 TraesCS6B01G357900 chr6D 82.143 140 15 4 6553 6691 456737487 456737617 2.040000e-20 111.0
137 TraesCS6B01G357900 chr6D 79.433 141 28 1 6551 6691 464534664 464534525 1.590000e-16 99.0
138 TraesCS6B01G357900 chr6D 79.412 136 26 2 6553 6687 3319469 3319603 2.050000e-15 95.3
139 TraesCS6B01G357900 chrUn 79.286 140 28 1 6552 6691 35220741 35220879 5.700000e-16 97.1
140 TraesCS6B01G357900 chrUn 81.148 122 20 3 6552 6673 29514061 29514179 2.050000e-15 95.3
141 TraesCS6B01G357900 chrUn 100.000 32 0 0 6509 6540 35220676 35220707 7.480000e-05 60.2
142 TraesCS6B01G357900 chrUn 89.130 46 5 0 6495 6540 10092701 10092656 2.690000e-04 58.4
143 TraesCS6B01G357900 chrUn 94.444 36 2 0 6504 6539 28826873 28826908 1.000000e-03 56.5
144 TraesCS6B01G357900 chrUn 100.000 29 0 0 6512 6540 293211382 293211354 3.000000e-03 54.7
145 TraesCS6B01G357900 chr6A 78.169 142 25 6 6551 6689 496574759 496574897 1.230000e-12 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G357900 chr6B 626211094 626217999 6905 False 12754.000000 12754 100.000000 1 6906 1 chr6B.!!$F3 6905
1 TraesCS6B01G357900 chr6B 416909775 416910991 1216 True 1973.000000 1973 95.905000 4256 5474 1 chr6B.!!$R2 1218
2 TraesCS6B01G357900 chr6B 506542991 506544220 1229 False 1402.000000 1402 87.429000 4256 5474 1 chr6B.!!$F2 1218
3 TraesCS6B01G357900 chr6B 518592871 518593504 633 True 522.000000 922 96.241000 4744 5475 2 chr6B.!!$R4 731
4 TraesCS6B01G357900 chr4D 25692668 25696035 3367 True 801.940000 2580 90.727400 943 6742 5 chr4D.!!$R7 5799
5 TraesCS6B01G357900 chr4D 5683734 5686107 2373 False 663.175000 1563 90.955750 1042 6742 4 chr4D.!!$F3 5700
6 TraesCS6B01G357900 chr4A 5407633 5408691 1058 True 1764.000000 1764 96.701000 1229 2289 1 chr4A.!!$R1 1060
7 TraesCS6B01G357900 chr4A 94991636 94992691 1055 False 1759.000000 1759 96.692000 1233 2290 1 chr4A.!!$F1 1057
8 TraesCS6B01G357900 chr4A 692382321 692385966 3645 True 924.200000 2547 87.485800 943 6906 5 chr4A.!!$R4 5963
9 TraesCS6B01G357900 chr7A 31597710 31598768 1058 True 1845.000000 1845 98.115000 1232 2290 1 chr7A.!!$R1 1058
10 TraesCS6B01G357900 chr7A 129869905 129870962 1057 True 1757.000000 1757 96.604000 1230 2289 1 chr7A.!!$R2 1059
11 TraesCS6B01G357900 chr7A 717328605 717329800 1195 False 1589.000000 1589 90.507000 4256 5475 1 chr7A.!!$F1 1219
12 TraesCS6B01G357900 chr7A 32629190 32633036 3846 True 754.016667 2536 87.624333 943 6822 6 chr7A.!!$R3 5879
13 TraesCS6B01G357900 chr7D 32606119 32609745 3626 True 919.800000 2534 88.057000 943 6906 5 chr7D.!!$R5 5963
14 TraesCS6B01G357900 chr7D 47185988 47186525 537 False 316.000000 316 77.697000 4940 5475 1 chr7D.!!$F1 535
15 TraesCS6B01G357900 chr7D 558183529 558184754 1225 True 263.000000 263 71.014000 4256 5473 1 chr7D.!!$R1 1217
16 TraesCS6B01G357900 chr4B 311201607 311202833 1226 False 1140.000000 1140 83.591000 4256 5474 1 chr4B.!!$F1 1218
17 TraesCS6B01G357900 chr4B 38025289 38028424 3135 True 1035.500000 2481 88.828750 943 6296 4 chr4B.!!$R2 5353
18 TraesCS6B01G357900 chr4B 9948276 9949691 1415 False 422.750000 767 92.850000 5607 6896 4 chr4B.!!$F3 1289
19 TraesCS6B01G357900 chr5B 44244296 44245512 1216 True 1988.000000 1988 96.148000 4256 5473 1 chr5B.!!$R1 1217
20 TraesCS6B01G357900 chr5B 567582697 567583752 1055 True 1840.000000 1840 98.108000 1232 2288 1 chr5B.!!$R2 1056
21 TraesCS6B01G357900 chr5B 171733996 171735226 1230 False 1393.000000 1393 87.308000 4256 5474 1 chr5B.!!$F2 1218
22 TraesCS6B01G357900 chr5B 454286235 454287464 1229 False 1264.000000 1264 85.425000 4256 5474 1 chr5B.!!$F3 1218
23 TraesCS6B01G357900 chr5A 573653321 573654373 1052 True 1760.000000 1760 96.783000 1232 2288 1 chr5A.!!$R1 1056
24 TraesCS6B01G357900 chr1A 477036148 477037201 1053 False 1757.000000 1757 96.692000 1232 2289 1 chr1A.!!$F3 1057
25 TraesCS6B01G357900 chr1A 499618200 499619255 1055 True 1753.000000 1753 96.597000 1232 2289 1 chr1A.!!$R1 1057
26 TraesCS6B01G357900 chr1A 442630429 442631643 1214 False 1417.000000 1417 87.745000 4256 5474 1 chr1A.!!$F2 1218
27 TraesCS6B01G357900 chr3A 522619638 522620707 1069 True 1738.000000 1738 95.985000 1228 2297 1 chr3A.!!$R2 1069
28 TraesCS6B01G357900 chr3A 460142368 460143594 1226 True 793.000000 793 78.554000 4259 5473 1 chr3A.!!$R1 1214
29 TraesCS6B01G357900 chr2A 139932104 139933307 1203 True 1406.000000 1406 87.715000 4256 5473 1 chr2A.!!$R2 1217
30 TraesCS6B01G357900 chr2A 424165966 424167088 1122 False 1306.000000 1306 87.710000 4351 5475 1 chr2A.!!$F1 1124
31 TraesCS6B01G357900 chr1D 347280178 347280917 739 True 577.000000 577 80.857000 4734 5475 1 chr1D.!!$R2 741
32 TraesCS6B01G357900 chr3B 680748847 680751052 2205 False 277.000000 350 80.124333 943 4253 3 chr3B.!!$F1 3310

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
241 242 0.035152 AGCCGGCTTGATGACAATCA 60.035 50.0 27.08 0.00 41.16 2.57 F
793 794 0.037590 TCCGGTTGCCATGCTTAACT 59.962 50.0 0.00 0.00 0.00 2.24 F
892 893 0.259065 TGAGTAGGACAGCCCGATCT 59.741 55.0 0.00 0.00 40.87 2.75 F
2290 2522 0.463833 GGCAGTTATCGGGACCCTTG 60.464 60.0 9.41 0.00 0.00 3.61 F
2834 3179 0.183731 GGATGTGGTGGGGGATCTTC 59.816 60.0 0.00 0.00 0.00 2.87 F
3255 3630 0.253044 TATGCTCTGGTCTTGTGGCC 59.747 55.0 0.00 0.00 0.00 5.36 F
4686 5184 0.671781 CAAGACTGCTACGGCTGCTT 60.672 55.0 0.00 0.00 40.37 3.91 F
5234 5734 0.178953 ACTTTTGCAGGCCATCAGGT 60.179 50.0 5.01 0.09 37.19 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1393 1624 0.033781 CCCTCCGTGTGGTAAAACGA 59.966 55.000 0.0 0.0 42.32 3.85 R
2706 3028 0.108585 AACGGTGCTGAACTGGTCAT 59.891 50.000 0.0 0.0 39.74 3.06 R
2834 3179 0.796312 AAATCAGCGTTAGGTGTGCG 59.204 50.000 0.0 0.0 45.42 5.34 R
3297 3676 1.338020 GCCTGCTCATAAATTTCCCCG 59.662 52.381 0.0 0.0 0.00 5.73 R
4710 5208 0.250166 TCCATCGGATCTCGTCGCTA 60.250 55.000 0.0 0.0 40.32 4.26 R
4782 5280 1.001633 GTGGAGGTAAGGTTCGCTTGA 59.998 52.381 0.0 0.0 0.00 3.02 R
5797 6350 0.319555 TCGCCTTCTGGAACAAGACG 60.320 55.000 0.0 0.0 38.70 4.18 R
6171 6761 1.299926 GATATTGCCGCCGTCGACT 60.300 57.895 14.7 0.0 38.10 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 4.742201 TCTGTTCGGCCGCAGCTC 62.742 66.667 23.51 9.01 39.73 4.09
20 21 4.617520 TGTTCGGCCGCAGCTCAA 62.618 61.111 23.51 5.21 39.73 3.02
21 22 3.353836 GTTCGGCCGCAGCTCAAA 61.354 61.111 23.51 4.32 39.73 2.69
22 23 3.353836 TTCGGCCGCAGCTCAAAC 61.354 61.111 23.51 0.00 39.73 2.93
25 26 3.294493 GGCCGCAGCTCAAACCAA 61.294 61.111 0.00 0.00 39.73 3.67
26 27 2.639327 GGCCGCAGCTCAAACCAAT 61.639 57.895 0.00 0.00 39.73 3.16
27 28 1.153958 GCCGCAGCTCAAACCAATC 60.154 57.895 0.00 0.00 35.50 2.67
28 29 1.508088 CCGCAGCTCAAACCAATCC 59.492 57.895 0.00 0.00 0.00 3.01
29 30 0.962356 CCGCAGCTCAAACCAATCCT 60.962 55.000 0.00 0.00 0.00 3.24
30 31 0.883833 CGCAGCTCAAACCAATCCTT 59.116 50.000 0.00 0.00 0.00 3.36
31 32 2.083774 CGCAGCTCAAACCAATCCTTA 58.916 47.619 0.00 0.00 0.00 2.69
32 33 2.487762 CGCAGCTCAAACCAATCCTTAA 59.512 45.455 0.00 0.00 0.00 1.85
33 34 3.057596 CGCAGCTCAAACCAATCCTTAAA 60.058 43.478 0.00 0.00 0.00 1.52
34 35 4.558496 CGCAGCTCAAACCAATCCTTAAAA 60.558 41.667 0.00 0.00 0.00 1.52
35 36 5.482006 GCAGCTCAAACCAATCCTTAAAAT 58.518 37.500 0.00 0.00 0.00 1.82
36 37 5.349543 GCAGCTCAAACCAATCCTTAAAATG 59.650 40.000 0.00 0.00 0.00 2.32
37 38 6.458210 CAGCTCAAACCAATCCTTAAAATGT 58.542 36.000 0.00 0.00 0.00 2.71
38 39 6.366877 CAGCTCAAACCAATCCTTAAAATGTG 59.633 38.462 0.00 0.00 0.00 3.21
39 40 6.041979 AGCTCAAACCAATCCTTAAAATGTGT 59.958 34.615 0.00 0.00 0.00 3.72
40 41 6.705825 GCTCAAACCAATCCTTAAAATGTGTT 59.294 34.615 0.00 0.00 0.00 3.32
41 42 7.226523 GCTCAAACCAATCCTTAAAATGTGTTT 59.773 33.333 0.00 0.00 0.00 2.83
42 43 9.108284 CTCAAACCAATCCTTAAAATGTGTTTT 57.892 29.630 0.00 0.00 40.48 2.43
43 44 9.103861 TCAAACCAATCCTTAAAATGTGTTTTC 57.896 29.630 0.00 0.00 38.44 2.29
44 45 8.341903 CAAACCAATCCTTAAAATGTGTTTTCC 58.658 33.333 0.00 0.00 38.44 3.13
45 46 6.220201 ACCAATCCTTAAAATGTGTTTTCCG 58.780 36.000 0.00 0.00 38.44 4.30
46 47 5.120053 CCAATCCTTAAAATGTGTTTTCCGC 59.880 40.000 0.00 0.00 38.44 5.54
47 48 3.891324 TCCTTAAAATGTGTTTTCCGCG 58.109 40.909 0.00 0.00 38.44 6.46
48 49 3.315749 TCCTTAAAATGTGTTTTCCGCGT 59.684 39.130 4.92 0.00 38.44 6.01
49 50 4.045783 CCTTAAAATGTGTTTTCCGCGTT 58.954 39.130 4.92 0.00 38.44 4.84
50 51 4.504826 CCTTAAAATGTGTTTTCCGCGTTT 59.495 37.500 4.92 0.00 43.00 3.60
52 53 4.508376 AAAATGTGTTTTCCGCGTTTTC 57.492 36.364 4.92 0.00 45.21 2.29
53 54 2.853731 ATGTGTTTTCCGCGTTTTCA 57.146 40.000 4.92 0.00 0.00 2.69
54 55 2.181426 TGTGTTTTCCGCGTTTTCAG 57.819 45.000 4.92 0.00 0.00 3.02
55 56 1.469308 TGTGTTTTCCGCGTTTTCAGT 59.531 42.857 4.92 0.00 0.00 3.41
56 57 2.095161 TGTGTTTTCCGCGTTTTCAGTT 60.095 40.909 4.92 0.00 0.00 3.16
57 58 2.528688 GTGTTTTCCGCGTTTTCAGTTC 59.471 45.455 4.92 0.00 0.00 3.01
58 59 2.114056 GTTTTCCGCGTTTTCAGTTCC 58.886 47.619 4.92 0.00 0.00 3.62
59 60 1.380524 TTTCCGCGTTTTCAGTTCCA 58.619 45.000 4.92 0.00 0.00 3.53
60 61 0.658897 TTCCGCGTTTTCAGTTCCAC 59.341 50.000 4.92 0.00 0.00 4.02
61 62 1.083015 CCGCGTTTTCAGTTCCACG 60.083 57.895 4.92 0.00 35.71 4.94
65 66 2.468532 CGTTTTCAGTTCCACGCTTT 57.531 45.000 0.00 0.00 0.00 3.51
66 67 2.792749 CGTTTTCAGTTCCACGCTTTT 58.207 42.857 0.00 0.00 0.00 2.27
67 68 3.942739 CGTTTTCAGTTCCACGCTTTTA 58.057 40.909 0.00 0.00 0.00 1.52
68 69 4.344448 CGTTTTCAGTTCCACGCTTTTAA 58.656 39.130 0.00 0.00 0.00 1.52
69 70 4.436523 CGTTTTCAGTTCCACGCTTTTAAG 59.563 41.667 0.00 0.00 0.00 1.85
70 71 4.561735 TTTCAGTTCCACGCTTTTAAGG 57.438 40.909 0.00 0.00 0.00 2.69
71 72 3.478857 TCAGTTCCACGCTTTTAAGGA 57.521 42.857 0.00 0.00 0.00 3.36
72 73 4.015872 TCAGTTCCACGCTTTTAAGGAT 57.984 40.909 0.00 0.00 0.00 3.24
73 74 5.155278 TCAGTTCCACGCTTTTAAGGATA 57.845 39.130 0.00 0.00 0.00 2.59
74 75 5.741011 TCAGTTCCACGCTTTTAAGGATAT 58.259 37.500 0.00 0.00 0.00 1.63
75 76 5.584649 TCAGTTCCACGCTTTTAAGGATATG 59.415 40.000 0.00 0.00 0.00 1.78
76 77 4.335594 AGTTCCACGCTTTTAAGGATATGC 59.664 41.667 0.00 0.00 0.00 3.14
77 78 4.150897 TCCACGCTTTTAAGGATATGCT 57.849 40.909 0.00 0.00 0.00 3.79
78 79 5.284861 TCCACGCTTTTAAGGATATGCTA 57.715 39.130 0.00 0.00 0.00 3.49
79 80 5.297547 TCCACGCTTTTAAGGATATGCTAG 58.702 41.667 0.00 0.00 0.00 3.42
80 81 5.069914 TCCACGCTTTTAAGGATATGCTAGA 59.930 40.000 0.00 0.00 0.00 2.43
81 82 5.934625 CCACGCTTTTAAGGATATGCTAGAT 59.065 40.000 0.00 0.00 0.00 1.98
82 83 7.039293 TCCACGCTTTTAAGGATATGCTAGATA 60.039 37.037 0.00 0.00 0.00 1.98
83 84 7.766278 CCACGCTTTTAAGGATATGCTAGATAT 59.234 37.037 0.00 0.00 0.00 1.63
84 85 8.598924 CACGCTTTTAAGGATATGCTAGATATG 58.401 37.037 0.00 0.00 0.00 1.78
85 86 7.278868 ACGCTTTTAAGGATATGCTAGATATGC 59.721 37.037 0.00 0.08 0.00 3.14
86 87 7.493971 CGCTTTTAAGGATATGCTAGATATGCT 59.506 37.037 0.00 2.45 34.75 3.79
87 88 8.825745 GCTTTTAAGGATATGCTAGATATGCTC 58.174 37.037 12.92 2.24 32.60 4.26
100 101 9.440773 TGCTAGATATGCTCTTATAATGGTTTG 57.559 33.333 0.00 0.00 35.28 2.93
101 102 9.442047 GCTAGATATGCTCTTATAATGGTTTGT 57.558 33.333 0.00 0.00 35.28 2.83
107 108 8.682936 ATGCTCTTATAATGGTTTGTAAGGAG 57.317 34.615 3.45 0.00 37.23 3.69
108 109 7.630082 TGCTCTTATAATGGTTTGTAAGGAGT 58.370 34.615 3.45 0.00 37.23 3.85
109 110 8.764558 TGCTCTTATAATGGTTTGTAAGGAGTA 58.235 33.333 3.45 0.00 37.23 2.59
110 111 9.043079 GCTCTTATAATGGTTTGTAAGGAGTAC 57.957 37.037 3.45 0.00 37.23 2.73
124 125 8.652810 TGTAAGGAGTACAAAGTAACTCAAAC 57.347 34.615 0.00 1.05 43.21 2.93
125 126 6.839820 AAGGAGTACAAAGTAACTCAAACG 57.160 37.500 0.00 0.00 43.21 3.60
126 127 4.748600 AGGAGTACAAAGTAACTCAAACGC 59.251 41.667 0.00 0.00 43.21 4.84
127 128 4.508861 GGAGTACAAAGTAACTCAAACGCA 59.491 41.667 0.00 0.00 43.21 5.24
128 129 5.006941 GGAGTACAAAGTAACTCAAACGCAA 59.993 40.000 0.00 0.00 43.21 4.85
129 130 6.293244 GGAGTACAAAGTAACTCAAACGCAAT 60.293 38.462 0.00 0.00 43.21 3.56
130 131 7.095523 GGAGTACAAAGTAACTCAAACGCAATA 60.096 37.037 0.00 0.00 43.21 1.90
131 132 8.145316 AGTACAAAGTAACTCAAACGCAATAA 57.855 30.769 0.00 0.00 0.00 1.40
132 133 8.614346 AGTACAAAGTAACTCAAACGCAATAAA 58.386 29.630 0.00 0.00 0.00 1.40
133 134 9.224058 GTACAAAGTAACTCAAACGCAATAAAA 57.776 29.630 0.00 0.00 0.00 1.52
134 135 8.865590 ACAAAGTAACTCAAACGCAATAAAAT 57.134 26.923 0.00 0.00 0.00 1.82
135 136 9.308318 ACAAAGTAACTCAAACGCAATAAAATT 57.692 25.926 0.00 0.00 0.00 1.82
139 140 9.953697 AGTAACTCAAACGCAATAAAATTTACA 57.046 25.926 0.00 0.00 0.00 2.41
143 144 9.469807 ACTCAAACGCAATAAAATTTACATTGA 57.530 25.926 21.16 10.48 32.54 2.57
144 145 9.941991 CTCAAACGCAATAAAATTTACATTGAG 57.058 29.630 21.16 20.03 36.10 3.02
145 146 8.920665 TCAAACGCAATAAAATTTACATTGAGG 58.079 29.630 21.16 15.87 34.85 3.86
146 147 8.920665 CAAACGCAATAAAATTTACATTGAGGA 58.079 29.630 21.16 0.00 34.85 3.71
147 148 8.460831 AACGCAATAAAATTTACATTGAGGAC 57.539 30.769 21.16 8.83 34.85 3.85
148 149 7.033185 ACGCAATAAAATTTACATTGAGGACC 58.967 34.615 21.16 8.58 34.85 4.46
149 150 6.475402 CGCAATAAAATTTACATTGAGGACCC 59.525 38.462 21.16 8.10 32.54 4.46
150 151 7.555965 GCAATAAAATTTACATTGAGGACCCT 58.444 34.615 21.16 0.00 32.54 4.34
151 152 8.691797 GCAATAAAATTTACATTGAGGACCCTA 58.308 33.333 21.16 0.00 32.54 3.53
153 154 9.762381 AATAAAATTTACATTGAGGACCCTACA 57.238 29.630 0.00 0.00 0.00 2.74
154 155 7.462571 AAAATTTACATTGAGGACCCTACAC 57.537 36.000 0.00 0.00 0.00 2.90
155 156 4.563140 TTTACATTGAGGACCCTACACC 57.437 45.455 0.00 0.00 0.00 4.16
156 157 2.038863 ACATTGAGGACCCTACACCA 57.961 50.000 0.00 0.00 0.00 4.17
157 158 1.628846 ACATTGAGGACCCTACACCAC 59.371 52.381 0.00 0.00 0.00 4.16
158 159 0.902531 ATTGAGGACCCTACACCACG 59.097 55.000 0.00 0.00 0.00 4.94
159 160 1.189524 TTGAGGACCCTACACCACGG 61.190 60.000 0.00 0.00 0.00 4.94
160 161 1.304713 GAGGACCCTACACCACGGA 60.305 63.158 0.00 0.00 0.00 4.69
161 162 0.901580 GAGGACCCTACACCACGGAA 60.902 60.000 0.00 0.00 0.00 4.30
162 163 1.190178 AGGACCCTACACCACGGAAC 61.190 60.000 0.00 0.00 0.00 3.62
178 179 3.081329 GGAACGATCACTACTAGTGCC 57.919 52.381 5.39 2.63 45.54 5.01
179 180 2.541178 GGAACGATCACTACTAGTGCCG 60.541 54.545 20.00 20.00 45.54 5.69
180 181 1.022735 ACGATCACTACTAGTGCCGG 58.977 55.000 22.92 0.00 45.54 6.13
181 182 1.306148 CGATCACTACTAGTGCCGGA 58.694 55.000 5.05 0.00 45.54 5.14
182 183 1.674441 CGATCACTACTAGTGCCGGAA 59.326 52.381 5.05 0.00 45.54 4.30
183 184 2.541178 CGATCACTACTAGTGCCGGAAC 60.541 54.545 5.05 4.25 45.54 3.62
184 185 3.324170 CACTACTAGTGCCGGAACG 57.676 57.895 5.05 0.00 44.83 3.95
200 201 3.072598 CGAGTTGTCGGCACATCG 58.927 61.111 8.45 8.45 42.87 3.84
201 202 1.733041 CGAGTTGTCGGCACATCGT 60.733 57.895 13.37 0.00 42.87 3.73
202 203 1.282248 CGAGTTGTCGGCACATCGTT 61.282 55.000 13.37 0.00 42.87 3.85
203 204 0.163788 GAGTTGTCGGCACATCGTTG 59.836 55.000 0.00 0.00 30.55 4.10
204 205 0.531974 AGTTGTCGGCACATCGTTGT 60.532 50.000 0.00 0.00 36.15 3.32
205 206 0.110823 GTTGTCGGCACATCGTTGTC 60.111 55.000 0.00 0.00 32.34 3.18
206 207 1.553195 TTGTCGGCACATCGTTGTCG 61.553 55.000 0.00 0.00 46.10 4.35
207 208 3.109547 TCGGCACATCGTTGTCGC 61.110 61.111 0.00 4.60 44.36 5.19
208 209 4.147322 CGGCACATCGTTGTCGCC 62.147 66.667 20.77 20.77 42.11 5.54
209 210 2.742372 GGCACATCGTTGTCGCCT 60.742 61.111 22.23 0.00 42.19 5.52
210 211 2.740714 GGCACATCGTTGTCGCCTC 61.741 63.158 22.23 6.98 42.19 4.70
211 212 1.738099 GCACATCGTTGTCGCCTCT 60.738 57.895 0.00 0.00 32.34 3.69
212 213 1.687494 GCACATCGTTGTCGCCTCTC 61.687 60.000 0.00 0.00 32.34 3.20
213 214 1.078759 CACATCGTTGTCGCCTCTCC 61.079 60.000 0.00 0.00 32.34 3.71
214 215 1.251527 ACATCGTTGTCGCCTCTCCT 61.252 55.000 0.00 0.00 36.96 3.69
215 216 0.526524 CATCGTTGTCGCCTCTCCTC 60.527 60.000 0.00 0.00 36.96 3.71
216 217 0.681564 ATCGTTGTCGCCTCTCCTCT 60.682 55.000 0.00 0.00 36.96 3.69
217 218 1.137825 CGTTGTCGCCTCTCCTCTC 59.862 63.158 0.00 0.00 0.00 3.20
218 219 1.513622 GTTGTCGCCTCTCCTCTCC 59.486 63.158 0.00 0.00 0.00 3.71
219 220 1.682684 TTGTCGCCTCTCCTCTCCC 60.683 63.158 0.00 0.00 0.00 4.30
220 221 3.213402 GTCGCCTCTCCTCTCCCG 61.213 72.222 0.00 0.00 0.00 5.14
221 222 4.507916 TCGCCTCTCCTCTCCCGG 62.508 72.222 0.00 0.00 0.00 5.73
222 223 4.507916 CGCCTCTCCTCTCCCGGA 62.508 72.222 0.73 0.00 0.00 5.14
236 237 2.892425 CGGAGCCGGCTTGATGAC 60.892 66.667 33.34 16.77 35.56 3.06
237 238 2.268920 GGAGCCGGCTTGATGACA 59.731 61.111 33.34 0.00 0.00 3.58
238 239 1.377202 GGAGCCGGCTTGATGACAA 60.377 57.895 33.34 0.00 34.65 3.18
239 240 0.749454 GGAGCCGGCTTGATGACAAT 60.749 55.000 33.34 3.09 35.37 2.71
240 241 0.659957 GAGCCGGCTTGATGACAATC 59.340 55.000 33.34 10.12 35.37 2.67
241 242 0.035152 AGCCGGCTTGATGACAATCA 60.035 50.000 27.08 0.00 41.16 2.57
242 243 0.379669 GCCGGCTTGATGACAATCAG 59.620 55.000 22.15 0.00 43.64 2.90
243 244 2.013563 GCCGGCTTGATGACAATCAGA 61.014 52.381 22.15 0.00 43.64 3.27
244 245 2.358957 CCGGCTTGATGACAATCAGAA 58.641 47.619 0.00 0.00 43.64 3.02
245 246 2.353889 CCGGCTTGATGACAATCAGAAG 59.646 50.000 0.00 0.00 43.64 2.85
246 247 3.264947 CGGCTTGATGACAATCAGAAGA 58.735 45.455 5.11 0.00 43.64 2.87
247 248 3.309138 CGGCTTGATGACAATCAGAAGAG 59.691 47.826 5.11 0.00 43.64 2.85
248 249 4.260170 GGCTTGATGACAATCAGAAGAGT 58.740 43.478 5.11 0.00 43.64 3.24
249 250 4.332268 GGCTTGATGACAATCAGAAGAGTC 59.668 45.833 5.11 0.00 43.64 3.36
250 251 5.177326 GCTTGATGACAATCAGAAGAGTCT 58.823 41.667 0.00 0.00 43.64 3.24
251 252 5.642919 GCTTGATGACAATCAGAAGAGTCTT 59.357 40.000 4.68 4.68 43.64 3.01
252 253 6.149142 GCTTGATGACAATCAGAAGAGTCTTT 59.851 38.462 6.88 0.00 43.64 2.52
253 254 7.430992 TTGATGACAATCAGAAGAGTCTTTG 57.569 36.000 6.88 7.64 43.64 2.77
254 255 5.410746 TGATGACAATCAGAAGAGTCTTTGC 59.589 40.000 6.88 0.00 37.91 3.68
255 256 4.965814 TGACAATCAGAAGAGTCTTTGCT 58.034 39.130 6.88 0.00 28.42 3.91
256 257 4.993584 TGACAATCAGAAGAGTCTTTGCTC 59.006 41.667 6.88 0.00 35.82 4.26
257 258 3.993081 ACAATCAGAAGAGTCTTTGCTCG 59.007 43.478 6.88 0.00 40.26 5.03
258 259 2.071688 TCAGAAGAGTCTTTGCTCGC 57.928 50.000 6.88 0.00 40.26 5.03
259 260 1.341209 TCAGAAGAGTCTTTGCTCGCA 59.659 47.619 6.88 0.00 40.26 5.10
260 261 2.028658 TCAGAAGAGTCTTTGCTCGCAT 60.029 45.455 6.88 0.00 40.26 4.73
261 262 2.093941 CAGAAGAGTCTTTGCTCGCATG 59.906 50.000 6.88 0.00 40.26 4.06
262 263 2.072298 GAAGAGTCTTTGCTCGCATGT 58.928 47.619 6.88 0.00 40.26 3.21
263 264 1.719600 AGAGTCTTTGCTCGCATGTC 58.280 50.000 0.00 0.00 40.26 3.06
264 265 1.274728 AGAGTCTTTGCTCGCATGTCT 59.725 47.619 0.00 0.00 40.26 3.41
265 266 1.658095 GAGTCTTTGCTCGCATGTCTC 59.342 52.381 0.00 0.00 0.00 3.36
266 267 0.723981 GTCTTTGCTCGCATGTCTCC 59.276 55.000 0.00 0.00 0.00 3.71
267 268 0.321346 TCTTTGCTCGCATGTCTCCA 59.679 50.000 0.00 0.00 0.00 3.86
268 269 1.065926 TCTTTGCTCGCATGTCTCCAT 60.066 47.619 0.00 0.00 0.00 3.41
277 278 2.632987 CATGTCTCCATGGATCAGCA 57.367 50.000 16.63 11.99 43.95 4.41
278 279 2.927028 CATGTCTCCATGGATCAGCAA 58.073 47.619 16.63 0.00 43.95 3.91
279 280 2.408271 TGTCTCCATGGATCAGCAAC 57.592 50.000 16.63 7.61 0.00 4.17
280 281 1.065199 TGTCTCCATGGATCAGCAACC 60.065 52.381 16.63 0.00 0.00 3.77
281 282 0.548031 TCTCCATGGATCAGCAACCC 59.452 55.000 16.63 0.00 0.00 4.11
282 283 0.256752 CTCCATGGATCAGCAACCCA 59.743 55.000 16.63 0.00 0.00 4.51
283 284 0.256752 TCCATGGATCAGCAACCCAG 59.743 55.000 11.44 0.00 32.90 4.45
284 285 0.256752 CCATGGATCAGCAACCCAGA 59.743 55.000 5.56 0.00 32.90 3.86
285 286 1.676746 CATGGATCAGCAACCCAGAG 58.323 55.000 0.00 0.00 32.90 3.35
286 287 0.106819 ATGGATCAGCAACCCAGAGC 60.107 55.000 0.00 0.00 32.90 4.09
287 288 1.452833 GGATCAGCAACCCAGAGCC 60.453 63.158 0.00 0.00 0.00 4.70
288 289 1.817099 GATCAGCAACCCAGAGCCG 60.817 63.158 0.00 0.00 0.00 5.52
289 290 2.527951 GATCAGCAACCCAGAGCCGT 62.528 60.000 0.00 0.00 0.00 5.68
290 291 2.527951 ATCAGCAACCCAGAGCCGTC 62.528 60.000 0.00 0.00 0.00 4.79
291 292 4.379243 AGCAACCCAGAGCCGTCG 62.379 66.667 0.00 0.00 0.00 5.12
292 293 4.681978 GCAACCCAGAGCCGTCGT 62.682 66.667 0.00 0.00 0.00 4.34
293 294 2.432628 CAACCCAGAGCCGTCGTC 60.433 66.667 0.00 0.00 0.00 4.20
294 295 4.052229 AACCCAGAGCCGTCGTCG 62.052 66.667 0.00 0.00 0.00 5.12
296 297 4.477975 CCCAGAGCCGTCGTCGTC 62.478 72.222 0.71 0.00 35.01 4.20
297 298 4.813526 CCAGAGCCGTCGTCGTCG 62.814 72.222 4.87 4.87 38.55 5.12
303 304 4.175489 CCGTCGTCGTCGCCATCT 62.175 66.667 6.36 0.00 36.96 2.90
304 305 2.944557 CGTCGTCGTCGCCATCTG 60.945 66.667 0.00 0.00 36.96 2.90
305 306 2.483745 GTCGTCGTCGCCATCTGA 59.516 61.111 0.00 0.00 36.96 3.27
306 307 1.868251 GTCGTCGTCGCCATCTGAC 60.868 63.158 0.00 0.00 36.96 3.51
307 308 2.579787 CGTCGTCGCCATCTGACC 60.580 66.667 0.00 0.00 32.68 4.02
308 309 2.202756 GTCGTCGCCATCTGACCC 60.203 66.667 0.00 0.00 32.68 4.46
309 310 2.362503 TCGTCGCCATCTGACCCT 60.363 61.111 0.00 0.00 32.68 4.34
310 311 1.982395 TCGTCGCCATCTGACCCTT 60.982 57.895 0.00 0.00 32.68 3.95
311 312 0.681887 TCGTCGCCATCTGACCCTTA 60.682 55.000 0.00 0.00 32.68 2.69
312 313 0.174845 CGTCGCCATCTGACCCTTAA 59.825 55.000 0.00 0.00 32.68 1.85
313 314 1.404986 CGTCGCCATCTGACCCTTAAA 60.405 52.381 0.00 0.00 32.68 1.52
314 315 2.741878 CGTCGCCATCTGACCCTTAAAT 60.742 50.000 0.00 0.00 32.68 1.40
315 316 2.872858 GTCGCCATCTGACCCTTAAATC 59.127 50.000 0.00 0.00 0.00 2.17
316 317 2.503765 TCGCCATCTGACCCTTAAATCA 59.496 45.455 0.00 0.00 0.00 2.57
317 318 3.054728 TCGCCATCTGACCCTTAAATCAA 60.055 43.478 0.00 0.00 0.00 2.57
318 319 3.885297 CGCCATCTGACCCTTAAATCAAT 59.115 43.478 0.00 0.00 0.00 2.57
319 320 4.339247 CGCCATCTGACCCTTAAATCAATT 59.661 41.667 0.00 0.00 0.00 2.32
320 321 5.163519 CGCCATCTGACCCTTAAATCAATTT 60.164 40.000 0.00 0.00 0.00 1.82
321 322 6.044682 GCCATCTGACCCTTAAATCAATTTG 58.955 40.000 0.00 0.00 0.00 2.32
322 323 6.127366 GCCATCTGACCCTTAAATCAATTTGA 60.127 38.462 0.75 0.75 0.00 2.69
323 324 7.579339 GCCATCTGACCCTTAAATCAATTTGAA 60.579 37.037 2.68 0.00 0.00 2.69
324 325 7.977853 CCATCTGACCCTTAAATCAATTTGAAG 59.022 37.037 2.68 0.00 0.00 3.02
325 326 6.924111 TCTGACCCTTAAATCAATTTGAAGC 58.076 36.000 2.68 0.00 0.00 3.86
326 327 6.493115 TCTGACCCTTAAATCAATTTGAAGCA 59.507 34.615 2.68 0.00 0.00 3.91
327 328 6.454795 TGACCCTTAAATCAATTTGAAGCAC 58.545 36.000 2.68 0.00 0.00 4.40
328 329 6.267471 TGACCCTTAAATCAATTTGAAGCACT 59.733 34.615 2.68 0.00 0.00 4.40
329 330 7.066307 ACCCTTAAATCAATTTGAAGCACTT 57.934 32.000 2.68 0.00 0.00 3.16
330 331 6.930722 ACCCTTAAATCAATTTGAAGCACTTG 59.069 34.615 2.68 0.00 0.00 3.16
331 332 7.153985 CCCTTAAATCAATTTGAAGCACTTGA 58.846 34.615 2.68 0.00 32.63 3.02
332 333 7.116805 CCCTTAAATCAATTTGAAGCACTTGAC 59.883 37.037 2.68 0.00 31.00 3.18
333 334 7.652909 CCTTAAATCAATTTGAAGCACTTGACA 59.347 33.333 2.68 0.00 31.00 3.58
334 335 9.199982 CTTAAATCAATTTGAAGCACTTGACAT 57.800 29.630 2.68 0.00 31.00 3.06
335 336 9.545105 TTAAATCAATTTGAAGCACTTGACATT 57.455 25.926 2.68 0.00 31.00 2.71
337 338 9.545105 AAATCAATTTGAAGCACTTGACATTAA 57.455 25.926 2.68 0.00 31.00 1.40
338 339 9.545105 AATCAATTTGAAGCACTTGACATTAAA 57.455 25.926 2.68 0.00 31.00 1.52
339 340 8.351495 TCAATTTGAAGCACTTGACATTAAAC 57.649 30.769 0.00 0.00 0.00 2.01
340 341 7.437862 TCAATTTGAAGCACTTGACATTAAACC 59.562 33.333 0.00 0.00 0.00 3.27
341 342 6.463995 TTTGAAGCACTTGACATTAAACCT 57.536 33.333 0.00 0.00 0.00 3.50
342 343 5.689383 TGAAGCACTTGACATTAAACCTC 57.311 39.130 0.00 0.00 0.00 3.85
343 344 4.213270 TGAAGCACTTGACATTAAACCTCG 59.787 41.667 0.00 0.00 0.00 4.63
344 345 2.484264 AGCACTTGACATTAAACCTCGC 59.516 45.455 0.00 0.00 0.00 5.03
345 346 2.414161 GCACTTGACATTAAACCTCGCC 60.414 50.000 0.00 0.00 0.00 5.54
346 347 2.073816 ACTTGACATTAAACCTCGCCG 58.926 47.619 0.00 0.00 0.00 6.46
347 348 1.396996 CTTGACATTAAACCTCGCCGG 59.603 52.381 0.00 0.00 39.35 6.13
376 377 3.110178 GCACGACGAGAAACCCCG 61.110 66.667 0.00 0.00 0.00 5.73
377 378 3.110178 CACGACGAGAAACCCCGC 61.110 66.667 0.00 0.00 0.00 6.13
378 379 4.368543 ACGACGAGAAACCCCGCC 62.369 66.667 0.00 0.00 0.00 6.13
379 380 4.065281 CGACGAGAAACCCCGCCT 62.065 66.667 0.00 0.00 0.00 5.52
380 381 2.346365 GACGAGAAACCCCGCCTT 59.654 61.111 0.00 0.00 0.00 4.35
381 382 2.032071 ACGAGAAACCCCGCCTTG 59.968 61.111 0.00 0.00 0.00 3.61
382 383 2.345991 CGAGAAACCCCGCCTTGA 59.654 61.111 0.00 0.00 0.00 3.02
383 384 2.033194 CGAGAAACCCCGCCTTGAC 61.033 63.158 0.00 0.00 0.00 3.18
384 385 1.674651 GAGAAACCCCGCCTTGACC 60.675 63.158 0.00 0.00 0.00 4.02
385 386 2.125766 GAGAAACCCCGCCTTGACCT 62.126 60.000 0.00 0.00 0.00 3.85
386 387 1.674651 GAAACCCCGCCTTGACCTC 60.675 63.158 0.00 0.00 0.00 3.85
387 388 2.406002 GAAACCCCGCCTTGACCTCA 62.406 60.000 0.00 0.00 0.00 3.86
388 389 2.692273 AAACCCCGCCTTGACCTCAC 62.692 60.000 0.00 0.00 0.00 3.51
389 390 4.410400 CCCCGCCTTGACCTCACC 62.410 72.222 0.00 0.00 0.00 4.02
390 391 4.760047 CCCGCCTTGACCTCACCG 62.760 72.222 0.00 0.00 0.00 4.94
394 395 4.410400 CCTTGACCTCACCGCCCC 62.410 72.222 0.00 0.00 0.00 5.80
395 396 3.636231 CTTGACCTCACCGCCCCA 61.636 66.667 0.00 0.00 0.00 4.96
396 397 3.172106 TTGACCTCACCGCCCCAA 61.172 61.111 0.00 0.00 0.00 4.12
397 398 3.190738 TTGACCTCACCGCCCCAAG 62.191 63.158 0.00 0.00 0.00 3.61
398 399 3.319198 GACCTCACCGCCCCAAGA 61.319 66.667 0.00 0.00 0.00 3.02
399 400 2.852075 ACCTCACCGCCCCAAGAA 60.852 61.111 0.00 0.00 0.00 2.52
400 401 2.045926 CCTCACCGCCCCAAGAAG 60.046 66.667 0.00 0.00 0.00 2.85
401 402 2.592993 CCTCACCGCCCCAAGAAGA 61.593 63.158 0.00 0.00 0.00 2.87
402 403 1.376037 CTCACCGCCCCAAGAAGAC 60.376 63.158 0.00 0.00 0.00 3.01
403 404 2.111999 CTCACCGCCCCAAGAAGACA 62.112 60.000 0.00 0.00 0.00 3.41
404 405 1.228124 CACCGCCCCAAGAAGACAA 60.228 57.895 0.00 0.00 0.00 3.18
405 406 1.228154 ACCGCCCCAAGAAGACAAC 60.228 57.895 0.00 0.00 0.00 3.32
406 407 1.228124 CCGCCCCAAGAAGACAACA 60.228 57.895 0.00 0.00 0.00 3.33
407 408 0.609131 CCGCCCCAAGAAGACAACAT 60.609 55.000 0.00 0.00 0.00 2.71
408 409 0.523072 CGCCCCAAGAAGACAACATG 59.477 55.000 0.00 0.00 0.00 3.21
409 410 1.881925 CGCCCCAAGAAGACAACATGA 60.882 52.381 0.00 0.00 0.00 3.07
410 411 2.238521 GCCCCAAGAAGACAACATGAA 58.761 47.619 0.00 0.00 0.00 2.57
411 412 2.827921 GCCCCAAGAAGACAACATGAAT 59.172 45.455 0.00 0.00 0.00 2.57
412 413 3.119352 GCCCCAAGAAGACAACATGAATC 60.119 47.826 0.00 0.00 0.00 2.52
413 414 4.081406 CCCCAAGAAGACAACATGAATCA 58.919 43.478 0.00 0.00 0.00 2.57
414 415 4.523943 CCCCAAGAAGACAACATGAATCAA 59.476 41.667 0.00 0.00 0.00 2.57
415 416 5.464168 CCCAAGAAGACAACATGAATCAAC 58.536 41.667 0.00 0.00 0.00 3.18
416 417 5.464168 CCAAGAAGACAACATGAATCAACC 58.536 41.667 0.00 0.00 0.00 3.77
417 418 5.464168 CAAGAAGACAACATGAATCAACCC 58.536 41.667 0.00 0.00 0.00 4.11
418 419 3.753272 AGAAGACAACATGAATCAACCCG 59.247 43.478 0.00 0.00 0.00 5.28
419 420 2.436417 AGACAACATGAATCAACCCGG 58.564 47.619 0.00 0.00 0.00 5.73
420 421 2.039746 AGACAACATGAATCAACCCGGA 59.960 45.455 0.73 0.00 0.00 5.14
421 422 2.420022 GACAACATGAATCAACCCGGAG 59.580 50.000 0.73 0.00 0.00 4.63
422 423 1.133025 CAACATGAATCAACCCGGAGC 59.867 52.381 0.73 0.00 0.00 4.70
423 424 0.394352 ACATGAATCAACCCGGAGCC 60.394 55.000 0.73 0.00 0.00 4.70
424 425 1.153168 ATGAATCAACCCGGAGCCG 60.153 57.895 0.73 1.06 39.44 5.52
439 440 4.805231 CCGGTGCGTGCGGTCATA 62.805 66.667 0.00 0.00 0.00 2.15
440 441 2.584970 CGGTGCGTGCGGTCATAT 60.585 61.111 0.00 0.00 0.00 1.78
441 442 1.299544 CGGTGCGTGCGGTCATATA 60.300 57.895 0.00 0.00 0.00 0.86
442 443 0.666274 CGGTGCGTGCGGTCATATAT 60.666 55.000 0.00 0.00 0.00 0.86
443 444 1.508632 GGTGCGTGCGGTCATATATT 58.491 50.000 0.00 0.00 0.00 1.28
444 445 1.871039 GGTGCGTGCGGTCATATATTT 59.129 47.619 0.00 0.00 0.00 1.40
445 446 3.061322 GGTGCGTGCGGTCATATATTTA 58.939 45.455 0.00 0.00 0.00 1.40
446 447 3.682858 GGTGCGTGCGGTCATATATTTAT 59.317 43.478 0.00 0.00 0.00 1.40
447 448 4.153475 GGTGCGTGCGGTCATATATTTATT 59.847 41.667 0.00 0.00 0.00 1.40
448 449 5.334569 GGTGCGTGCGGTCATATATTTATTT 60.335 40.000 0.00 0.00 0.00 1.40
449 450 6.140110 GTGCGTGCGGTCATATATTTATTTT 58.860 36.000 0.00 0.00 0.00 1.82
450 451 6.302313 GTGCGTGCGGTCATATATTTATTTTC 59.698 38.462 0.00 0.00 0.00 2.29
451 452 6.017852 TGCGTGCGGTCATATATTTATTTTCA 60.018 34.615 0.00 0.00 0.00 2.69
452 453 6.853872 GCGTGCGGTCATATATTTATTTTCAA 59.146 34.615 0.00 0.00 0.00 2.69
453 454 7.059488 GCGTGCGGTCATATATTTATTTTCAAG 59.941 37.037 0.00 0.00 0.00 3.02
454 455 7.533900 CGTGCGGTCATATATTTATTTTCAAGG 59.466 37.037 0.00 0.00 0.00 3.61
455 456 8.349983 GTGCGGTCATATATTTATTTTCAAGGT 58.650 33.333 0.00 0.00 0.00 3.50
456 457 8.908903 TGCGGTCATATATTTATTTTCAAGGTT 58.091 29.630 0.00 0.00 0.00 3.50
526 527 9.535878 AAATGCTTTTCGTAAAAATAAAGTGGA 57.464 25.926 0.00 0.00 34.00 4.02
527 528 9.705290 AATGCTTTTCGTAAAAATAAAGTGGAT 57.295 25.926 0.00 0.00 34.00 3.41
528 529 9.705290 ATGCTTTTCGTAAAAATAAAGTGGATT 57.295 25.926 0.00 0.00 34.00 3.01
529 530 9.535878 TGCTTTTCGTAAAAATAAAGTGGATTT 57.464 25.926 0.00 0.00 34.00 2.17
562 563 7.887996 AAAATTATGTTATGTGCACCTGTTG 57.112 32.000 15.69 0.00 0.00 3.33
563 564 6.588719 AATTATGTTATGTGCACCTGTTGT 57.411 33.333 15.69 0.00 0.00 3.32
564 565 6.588719 ATTATGTTATGTGCACCTGTTGTT 57.411 33.333 15.69 0.00 0.00 2.83
565 566 4.935352 ATGTTATGTGCACCTGTTGTTT 57.065 36.364 15.69 0.00 0.00 2.83
566 567 4.727507 TGTTATGTGCACCTGTTGTTTT 57.272 36.364 15.69 0.00 0.00 2.43
567 568 4.677584 TGTTATGTGCACCTGTTGTTTTC 58.322 39.130 15.69 0.00 0.00 2.29
568 569 2.888834 ATGTGCACCTGTTGTTTTCC 57.111 45.000 15.69 0.00 0.00 3.13
569 570 0.453793 TGTGCACCTGTTGTTTTCCG 59.546 50.000 15.69 0.00 0.00 4.30
570 571 0.869880 GTGCACCTGTTGTTTTCCGC 60.870 55.000 5.22 0.00 0.00 5.54
571 572 1.657181 GCACCTGTTGTTTTCCGCG 60.657 57.895 0.00 0.00 0.00 6.46
572 573 1.725066 CACCTGTTGTTTTCCGCGT 59.275 52.632 4.92 0.00 0.00 6.01
573 574 0.099791 CACCTGTTGTTTTCCGCGTT 59.900 50.000 4.92 0.00 0.00 4.84
574 575 0.812549 ACCTGTTGTTTTCCGCGTTT 59.187 45.000 4.92 0.00 0.00 3.60
575 576 1.202817 ACCTGTTGTTTTCCGCGTTTT 59.797 42.857 4.92 0.00 0.00 2.43
576 577 1.849829 CCTGTTGTTTTCCGCGTTTTC 59.150 47.619 4.92 0.00 0.00 2.29
577 578 2.478879 CCTGTTGTTTTCCGCGTTTTCT 60.479 45.455 4.92 0.00 0.00 2.52
578 579 3.242804 CCTGTTGTTTTCCGCGTTTTCTA 60.243 43.478 4.92 0.00 0.00 2.10
579 580 4.533222 CTGTTGTTTTCCGCGTTTTCTAT 58.467 39.130 4.92 0.00 0.00 1.98
580 581 5.334260 CCTGTTGTTTTCCGCGTTTTCTATA 60.334 40.000 4.92 0.00 0.00 1.31
581 582 6.057627 TGTTGTTTTCCGCGTTTTCTATAA 57.942 33.333 4.92 0.00 0.00 0.98
582 583 5.908499 TGTTGTTTTCCGCGTTTTCTATAAC 59.092 36.000 4.92 1.61 0.00 1.89
583 584 5.670149 TGTTTTCCGCGTTTTCTATAACA 57.330 34.783 4.92 1.31 0.00 2.41
584 585 6.243811 TGTTTTCCGCGTTTTCTATAACAT 57.756 33.333 4.92 0.00 0.00 2.71
585 586 6.670233 TGTTTTCCGCGTTTTCTATAACATT 58.330 32.000 4.92 0.00 0.00 2.71
586 587 7.140048 TGTTTTCCGCGTTTTCTATAACATTT 58.860 30.769 4.92 0.00 0.00 2.32
587 588 7.648510 TGTTTTCCGCGTTTTCTATAACATTTT 59.351 29.630 4.92 0.00 0.00 1.82
588 589 9.116054 GTTTTCCGCGTTTTCTATAACATTTTA 57.884 29.630 4.92 0.00 0.00 1.52
589 590 9.843334 TTTTCCGCGTTTTCTATAACATTTTAT 57.157 25.926 4.92 0.00 0.00 1.40
622 623 4.981806 TTTTTGAATCCAATAGCTCCCG 57.018 40.909 0.00 0.00 31.46 5.14
623 624 3.924114 TTTGAATCCAATAGCTCCCGA 57.076 42.857 0.00 0.00 31.46 5.14
624 625 3.924114 TTGAATCCAATAGCTCCCGAA 57.076 42.857 0.00 0.00 0.00 4.30
625 626 3.194005 TGAATCCAATAGCTCCCGAAC 57.806 47.619 0.00 0.00 0.00 3.95
626 627 2.135933 GAATCCAATAGCTCCCGAACG 58.864 52.381 0.00 0.00 0.00 3.95
627 628 1.120530 ATCCAATAGCTCCCGAACGT 58.879 50.000 0.00 0.00 0.00 3.99
628 629 0.899720 TCCAATAGCTCCCGAACGTT 59.100 50.000 0.00 0.00 0.00 3.99
629 630 1.134907 TCCAATAGCTCCCGAACGTTC 60.135 52.381 18.47 18.47 0.00 3.95
640 641 1.865725 CGAACGTTCGGATTTTGAGC 58.134 50.000 36.53 4.05 46.30 4.26
641 642 1.193650 CGAACGTTCGGATTTTGAGCA 59.806 47.619 36.53 0.00 46.30 4.26
642 643 2.159707 CGAACGTTCGGATTTTGAGCAT 60.160 45.455 36.53 0.00 46.30 3.79
643 644 3.666902 CGAACGTTCGGATTTTGAGCATT 60.667 43.478 36.53 0.00 46.30 3.56
644 645 3.915437 ACGTTCGGATTTTGAGCATTT 57.085 38.095 0.00 0.00 0.00 2.32
645 646 3.821841 ACGTTCGGATTTTGAGCATTTC 58.178 40.909 0.00 0.00 0.00 2.17
646 647 2.840176 CGTTCGGATTTTGAGCATTTCG 59.160 45.455 0.00 0.00 0.00 3.46
647 648 3.666902 CGTTCGGATTTTGAGCATTTCGT 60.667 43.478 0.00 0.00 0.00 3.85
648 649 4.226761 GTTCGGATTTTGAGCATTTCGTT 58.773 39.130 0.00 0.00 0.00 3.85
649 650 4.078363 TCGGATTTTGAGCATTTCGTTC 57.922 40.909 0.00 0.00 0.00 3.95
650 651 3.119990 TCGGATTTTGAGCATTTCGTTCC 60.120 43.478 0.00 0.00 0.00 3.62
651 652 3.171277 GGATTTTGAGCATTTCGTTCCG 58.829 45.455 0.00 0.00 0.00 4.30
652 653 3.119990 GGATTTTGAGCATTTCGTTCCGA 60.120 43.478 0.00 0.00 0.00 4.55
653 654 3.972950 TTTTGAGCATTTCGTTCCGAA 57.027 38.095 0.00 0.00 44.28 4.30
654 655 2.961522 TTGAGCATTTCGTTCCGAAC 57.038 45.000 0.76 0.76 45.64 3.95
667 668 2.973419 TCCGAACGTTTTTACATGCC 57.027 45.000 0.46 0.00 0.00 4.40
668 669 2.219458 TCCGAACGTTTTTACATGCCA 58.781 42.857 0.46 0.00 0.00 4.92
669 670 2.617308 TCCGAACGTTTTTACATGCCAA 59.383 40.909 0.46 0.00 0.00 4.52
670 671 2.722116 CCGAACGTTTTTACATGCCAAC 59.278 45.455 0.46 0.00 0.00 3.77
671 672 3.549221 CCGAACGTTTTTACATGCCAACT 60.549 43.478 0.46 0.00 0.00 3.16
672 673 4.039032 CGAACGTTTTTACATGCCAACTT 58.961 39.130 0.46 0.00 0.00 2.66
673 674 4.501198 CGAACGTTTTTACATGCCAACTTT 59.499 37.500 0.46 0.00 0.00 2.66
674 675 5.681982 CGAACGTTTTTACATGCCAACTTTA 59.318 36.000 0.46 0.00 0.00 1.85
675 676 6.129561 CGAACGTTTTTACATGCCAACTTTAG 60.130 38.462 0.46 0.00 0.00 1.85
676 677 6.139048 ACGTTTTTACATGCCAACTTTAGT 57.861 33.333 0.00 0.00 0.00 2.24
677 678 6.566141 ACGTTTTTACATGCCAACTTTAGTT 58.434 32.000 0.00 0.00 39.12 2.24
690 691 4.439253 ACTTTAGTTGATAGGGGATGGC 57.561 45.455 0.00 0.00 0.00 4.40
691 692 3.785887 ACTTTAGTTGATAGGGGATGGCA 59.214 43.478 0.00 0.00 0.00 4.92
692 693 4.229582 ACTTTAGTTGATAGGGGATGGCAA 59.770 41.667 0.00 0.00 0.00 4.52
693 694 2.736670 AGTTGATAGGGGATGGCAAC 57.263 50.000 0.00 0.00 39.17 4.17
694 695 2.208872 AGTTGATAGGGGATGGCAACT 58.791 47.619 0.00 0.00 42.92 3.16
695 696 2.582636 AGTTGATAGGGGATGGCAACTT 59.417 45.455 0.00 0.00 44.68 2.66
696 697 2.952310 GTTGATAGGGGATGGCAACTTC 59.048 50.000 0.00 0.00 39.93 3.01
697 698 1.140852 TGATAGGGGATGGCAACTTCG 59.859 52.381 0.00 0.00 41.51 3.79
698 699 1.141053 GATAGGGGATGGCAACTTCGT 59.859 52.381 0.00 0.00 41.51 3.85
699 700 0.539986 TAGGGGATGGCAACTTCGTC 59.460 55.000 0.00 0.00 41.51 4.20
700 701 1.201429 AGGGGATGGCAACTTCGTCT 61.201 55.000 0.00 0.00 41.51 4.18
701 702 0.322546 GGGGATGGCAACTTCGTCTT 60.323 55.000 0.00 0.00 41.51 3.01
702 703 1.534729 GGGATGGCAACTTCGTCTTT 58.465 50.000 0.00 0.00 41.51 2.52
703 704 1.886542 GGGATGGCAACTTCGTCTTTT 59.113 47.619 0.00 0.00 41.51 2.27
704 705 2.296190 GGGATGGCAACTTCGTCTTTTT 59.704 45.455 0.00 0.00 41.51 1.94
735 736 7.489574 TTTGTTAGAAAATTGCCATGTTTCC 57.510 32.000 2.96 0.00 32.74 3.13
736 737 5.546526 TGTTAGAAAATTGCCATGTTTCCC 58.453 37.500 2.96 0.00 32.74 3.97
737 738 5.306678 TGTTAGAAAATTGCCATGTTTCCCT 59.693 36.000 2.96 0.00 32.74 4.20
738 739 6.495181 TGTTAGAAAATTGCCATGTTTCCCTA 59.505 34.615 2.96 0.00 32.74 3.53
739 740 7.015682 TGTTAGAAAATTGCCATGTTTCCCTAA 59.984 33.333 2.96 0.00 32.74 2.69
740 741 6.625532 AGAAAATTGCCATGTTTCCCTAAT 57.374 33.333 2.96 0.00 32.74 1.73
741 742 6.643388 AGAAAATTGCCATGTTTCCCTAATC 58.357 36.000 2.96 0.00 32.74 1.75
742 743 6.441604 AGAAAATTGCCATGTTTCCCTAATCT 59.558 34.615 2.96 0.00 32.74 2.40
743 744 5.859205 AATTGCCATGTTTCCCTAATCTC 57.141 39.130 0.00 0.00 0.00 2.75
744 745 4.314522 TTGCCATGTTTCCCTAATCTCA 57.685 40.909 0.00 0.00 0.00 3.27
745 746 3.620488 TGCCATGTTTCCCTAATCTCAC 58.380 45.455 0.00 0.00 0.00 3.51
746 747 2.614057 GCCATGTTTCCCTAATCTCACG 59.386 50.000 0.00 0.00 0.00 4.35
747 748 2.614057 CCATGTTTCCCTAATCTCACGC 59.386 50.000 0.00 0.00 0.00 5.34
748 749 3.270027 CATGTTTCCCTAATCTCACGCA 58.730 45.455 0.00 0.00 0.00 5.24
749 750 3.410631 TGTTTCCCTAATCTCACGCAA 57.589 42.857 0.00 0.00 0.00 4.85
750 751 3.745799 TGTTTCCCTAATCTCACGCAAA 58.254 40.909 0.00 0.00 0.00 3.68
751 752 3.500680 TGTTTCCCTAATCTCACGCAAAC 59.499 43.478 0.00 0.00 0.00 2.93
752 753 3.695830 TTCCCTAATCTCACGCAAACT 57.304 42.857 0.00 0.00 0.00 2.66
753 754 4.811969 TTCCCTAATCTCACGCAAACTA 57.188 40.909 0.00 0.00 0.00 2.24
754 755 4.811969 TCCCTAATCTCACGCAAACTAA 57.188 40.909 0.00 0.00 0.00 2.24
755 756 5.155278 TCCCTAATCTCACGCAAACTAAA 57.845 39.130 0.00 0.00 0.00 1.85
756 757 4.933400 TCCCTAATCTCACGCAAACTAAAC 59.067 41.667 0.00 0.00 0.00 2.01
757 758 4.935808 CCCTAATCTCACGCAAACTAAACT 59.064 41.667 0.00 0.00 0.00 2.66
758 759 5.411669 CCCTAATCTCACGCAAACTAAACTT 59.588 40.000 0.00 0.00 0.00 2.66
759 760 6.307155 CCTAATCTCACGCAAACTAAACTTG 58.693 40.000 0.00 0.00 0.00 3.16
760 761 5.751243 AATCTCACGCAAACTAAACTTGT 57.249 34.783 0.00 0.00 0.00 3.16
761 762 4.789095 TCTCACGCAAACTAAACTTGTC 57.211 40.909 0.00 0.00 0.00 3.18
762 763 4.185394 TCTCACGCAAACTAAACTTGTCA 58.815 39.130 0.00 0.00 0.00 3.58
763 764 4.814234 TCTCACGCAAACTAAACTTGTCAT 59.186 37.500 0.00 0.00 0.00 3.06
764 765 5.050363 TCTCACGCAAACTAAACTTGTCATC 60.050 40.000 0.00 0.00 0.00 2.92
765 766 4.814234 TCACGCAAACTAAACTTGTCATCT 59.186 37.500 0.00 0.00 0.00 2.90
766 767 5.986741 TCACGCAAACTAAACTTGTCATCTA 59.013 36.000 0.00 0.00 0.00 1.98
767 768 6.649141 TCACGCAAACTAAACTTGTCATCTAT 59.351 34.615 0.00 0.00 0.00 1.98
768 769 7.815549 TCACGCAAACTAAACTTGTCATCTATA 59.184 33.333 0.00 0.00 0.00 1.31
769 770 7.898309 CACGCAAACTAAACTTGTCATCTATAC 59.102 37.037 0.00 0.00 0.00 1.47
770 771 7.064253 ACGCAAACTAAACTTGTCATCTATACC 59.936 37.037 0.00 0.00 0.00 2.73
771 772 7.465513 CGCAAACTAAACTTGTCATCTATACCC 60.466 40.741 0.00 0.00 0.00 3.69
772 773 7.465513 GCAAACTAAACTTGTCATCTATACCCG 60.466 40.741 0.00 0.00 0.00 5.28
773 774 6.786967 ACTAAACTTGTCATCTATACCCGT 57.213 37.500 0.00 0.00 0.00 5.28
774 775 7.179076 ACTAAACTTGTCATCTATACCCGTT 57.821 36.000 0.00 0.00 0.00 4.44
775 776 7.263496 ACTAAACTTGTCATCTATACCCGTTC 58.737 38.462 0.00 0.00 0.00 3.95
776 777 4.667519 ACTTGTCATCTATACCCGTTCC 57.332 45.455 0.00 0.00 0.00 3.62
777 778 3.067742 ACTTGTCATCTATACCCGTTCCG 59.932 47.826 0.00 0.00 0.00 4.30
779 780 1.959282 GTCATCTATACCCGTTCCGGT 59.041 52.381 0.00 0.00 46.80 5.28
780 781 2.363359 GTCATCTATACCCGTTCCGGTT 59.637 50.000 0.00 0.00 46.80 4.44
781 782 2.363038 TCATCTATACCCGTTCCGGTTG 59.637 50.000 0.00 0.00 46.80 3.77
782 783 0.461135 TCTATACCCGTTCCGGTTGC 59.539 55.000 0.00 0.00 46.80 4.17
783 784 0.531311 CTATACCCGTTCCGGTTGCC 60.531 60.000 0.00 0.00 46.80 4.52
784 785 1.263342 TATACCCGTTCCGGTTGCCA 61.263 55.000 0.00 0.00 46.80 4.92
785 786 1.917336 ATACCCGTTCCGGTTGCCAT 61.917 55.000 0.00 0.00 46.80 4.40
786 787 2.806503 TACCCGTTCCGGTTGCCATG 62.807 60.000 0.00 0.00 46.80 3.66
787 788 4.114997 CCGTTCCGGTTGCCATGC 62.115 66.667 0.00 0.00 42.73 4.06
788 789 3.055719 CGTTCCGGTTGCCATGCT 61.056 61.111 0.00 0.00 0.00 3.79
789 790 2.625823 CGTTCCGGTTGCCATGCTT 61.626 57.895 0.00 0.00 0.00 3.91
790 791 1.302383 CGTTCCGGTTGCCATGCTTA 61.302 55.000 0.00 0.00 0.00 3.09
791 792 0.885196 GTTCCGGTTGCCATGCTTAA 59.115 50.000 0.00 0.00 0.00 1.85
792 793 0.885196 TTCCGGTTGCCATGCTTAAC 59.115 50.000 0.00 0.00 0.00 2.01
793 794 0.037590 TCCGGTTGCCATGCTTAACT 59.962 50.000 0.00 0.00 0.00 2.24
794 795 0.451783 CCGGTTGCCATGCTTAACTC 59.548 55.000 0.00 0.00 0.00 3.01
795 796 0.451783 CGGTTGCCATGCTTAACTCC 59.548 55.000 0.00 0.00 0.00 3.85
796 797 0.817654 GGTTGCCATGCTTAACTCCC 59.182 55.000 0.00 0.00 0.00 4.30
797 798 0.451783 GTTGCCATGCTTAACTCCCG 59.548 55.000 0.00 0.00 0.00 5.14
798 799 0.326595 TTGCCATGCTTAACTCCCGA 59.673 50.000 0.00 0.00 0.00 5.14
799 800 0.326595 TGCCATGCTTAACTCCCGAA 59.673 50.000 0.00 0.00 0.00 4.30
800 801 1.064758 TGCCATGCTTAACTCCCGAAT 60.065 47.619 0.00 0.00 0.00 3.34
801 802 1.334869 GCCATGCTTAACTCCCGAATG 59.665 52.381 0.00 0.00 0.00 2.67
802 803 2.643551 CCATGCTTAACTCCCGAATGT 58.356 47.619 0.00 0.00 0.00 2.71
803 804 3.016736 CCATGCTTAACTCCCGAATGTT 58.983 45.455 0.00 0.00 0.00 2.71
804 805 3.065371 CCATGCTTAACTCCCGAATGTTC 59.935 47.826 0.00 0.00 0.00 3.18
820 821 6.344800 CGAATGTTCGGAAGTTATCATTACG 58.655 40.000 7.24 6.21 46.30 3.18
821 822 6.561533 CGAATGTTCGGAAGTTATCATTACGG 60.562 42.308 7.24 0.00 46.30 4.02
822 823 5.075858 TGTTCGGAAGTTATCATTACGGT 57.924 39.130 0.00 0.00 34.68 4.83
823 824 5.481105 TGTTCGGAAGTTATCATTACGGTT 58.519 37.500 0.00 0.00 34.68 4.44
824 825 5.933463 TGTTCGGAAGTTATCATTACGGTTT 59.067 36.000 0.00 0.00 34.68 3.27
825 826 6.427547 TGTTCGGAAGTTATCATTACGGTTTT 59.572 34.615 0.00 0.00 34.68 2.43
826 827 7.041235 TGTTCGGAAGTTATCATTACGGTTTTT 60.041 33.333 0.00 0.00 34.68 1.94
849 850 9.863845 TTTTTAGGATGAAAAAGAAAACGTTCT 57.136 25.926 0.00 0.00 46.47 3.01
850 851 8.850454 TTTAGGATGAAAAAGAAAACGTTCTG 57.150 30.769 0.00 0.00 43.59 3.02
851 852 5.831997 AGGATGAAAAAGAAAACGTTCTGG 58.168 37.500 0.00 0.00 43.59 3.86
852 853 5.359860 AGGATGAAAAAGAAAACGTTCTGGT 59.640 36.000 0.00 0.00 43.59 4.00
853 854 6.040247 GGATGAAAAAGAAAACGTTCTGGTT 58.960 36.000 0.00 0.00 43.59 3.67
854 855 6.198403 GGATGAAAAAGAAAACGTTCTGGTTC 59.802 38.462 0.00 1.32 43.59 3.62
855 856 6.015027 TGAAAAAGAAAACGTTCTGGTTCA 57.985 33.333 0.00 6.53 43.59 3.18
856 857 5.859648 TGAAAAAGAAAACGTTCTGGTTCAC 59.140 36.000 0.00 0.00 43.59 3.18
857 858 5.379732 AAAAGAAAACGTTCTGGTTCACA 57.620 34.783 0.00 0.00 43.59 3.58
858 859 4.616181 AAGAAAACGTTCTGGTTCACAG 57.384 40.909 0.00 0.00 43.59 3.66
871 872 3.569701 TGGTTCACAGAAAGAAATGGAGC 59.430 43.478 0.00 0.00 0.00 4.70
872 873 3.057245 GGTTCACAGAAAGAAATGGAGCC 60.057 47.826 0.00 0.00 0.00 4.70
873 874 3.795688 TCACAGAAAGAAATGGAGCCT 57.204 42.857 0.00 0.00 0.00 4.58
874 875 3.415212 TCACAGAAAGAAATGGAGCCTG 58.585 45.455 0.00 0.00 0.00 4.85
875 876 3.072915 TCACAGAAAGAAATGGAGCCTGA 59.927 43.478 0.00 0.00 0.00 3.86
876 877 3.439476 CACAGAAAGAAATGGAGCCTGAG 59.561 47.826 0.00 0.00 0.00 3.35
877 878 3.073650 ACAGAAAGAAATGGAGCCTGAGT 59.926 43.478 0.00 0.00 0.00 3.41
878 879 4.287067 ACAGAAAGAAATGGAGCCTGAGTA 59.713 41.667 0.00 0.00 0.00 2.59
879 880 4.874966 CAGAAAGAAATGGAGCCTGAGTAG 59.125 45.833 0.00 0.00 0.00 2.57
889 890 4.338815 CTGAGTAGGACAGCCCGA 57.661 61.111 0.00 0.00 40.87 5.14
890 891 2.814023 CTGAGTAGGACAGCCCGAT 58.186 57.895 0.00 0.00 40.87 4.18
891 892 0.671251 CTGAGTAGGACAGCCCGATC 59.329 60.000 0.00 0.00 40.87 3.69
892 893 0.259065 TGAGTAGGACAGCCCGATCT 59.741 55.000 0.00 0.00 40.87 2.75
893 894 0.955905 GAGTAGGACAGCCCGATCTC 59.044 60.000 0.00 0.00 40.87 2.75
894 895 0.259065 AGTAGGACAGCCCGATCTCA 59.741 55.000 0.00 0.00 40.87 3.27
895 896 1.133325 AGTAGGACAGCCCGATCTCAT 60.133 52.381 0.00 0.00 40.87 2.90
896 897 2.108425 AGTAGGACAGCCCGATCTCATA 59.892 50.000 0.00 0.00 40.87 2.15
897 898 1.626686 AGGACAGCCCGATCTCATAG 58.373 55.000 0.00 0.00 40.87 2.23
898 899 1.133325 AGGACAGCCCGATCTCATAGT 60.133 52.381 0.00 0.00 40.87 2.12
899 900 1.689273 GGACAGCCCGATCTCATAGTT 59.311 52.381 0.00 0.00 0.00 2.24
900 901 2.546795 GGACAGCCCGATCTCATAGTTG 60.547 54.545 0.00 0.00 0.00 3.16
901 902 1.414181 ACAGCCCGATCTCATAGTTGG 59.586 52.381 0.00 0.00 0.00 3.77
902 903 1.688735 CAGCCCGATCTCATAGTTGGA 59.311 52.381 0.00 0.00 0.00 3.53
903 904 1.967066 AGCCCGATCTCATAGTTGGAG 59.033 52.381 0.00 0.00 0.00 3.86
904 905 1.606737 GCCCGATCTCATAGTTGGAGC 60.607 57.143 0.00 0.00 32.38 4.70
905 906 1.336332 CCCGATCTCATAGTTGGAGCG 60.336 57.143 0.00 0.00 38.38 5.03
906 907 2.057503 CGATCTCATAGTTGGAGCGG 57.942 55.000 0.00 0.00 35.64 5.52
907 908 1.609072 CGATCTCATAGTTGGAGCGGA 59.391 52.381 0.00 0.00 35.64 5.54
908 909 2.351253 CGATCTCATAGTTGGAGCGGAG 60.351 54.545 0.00 0.00 35.64 4.63
909 910 1.403814 TCTCATAGTTGGAGCGGAGG 58.596 55.000 0.00 0.00 32.38 4.30
910 911 1.063942 TCTCATAGTTGGAGCGGAGGA 60.064 52.381 0.00 0.00 32.38 3.71
911 912 1.339610 CTCATAGTTGGAGCGGAGGAG 59.660 57.143 0.00 0.00 0.00 3.69
912 913 1.063942 TCATAGTTGGAGCGGAGGAGA 60.064 52.381 0.00 0.00 0.00 3.71
913 914 1.067821 CATAGTTGGAGCGGAGGAGAC 59.932 57.143 0.00 0.00 0.00 3.36
938 939 4.109675 CCCCCAAACCGCCTCGAT 62.110 66.667 0.00 0.00 0.00 3.59
939 940 2.513897 CCCCAAACCGCCTCGATC 60.514 66.667 0.00 0.00 0.00 3.69
940 941 2.584608 CCCAAACCGCCTCGATCT 59.415 61.111 0.00 0.00 0.00 2.75
941 942 1.521681 CCCAAACCGCCTCGATCTC 60.522 63.158 0.00 0.00 0.00 2.75
967 973 2.651232 CGAATCCGCGACTCGACC 60.651 66.667 8.23 0.00 41.67 4.79
1058 1073 1.677633 GCTTAAGGCGGCCTCCAAA 60.678 57.895 24.08 15.55 30.89 3.28
1157 1369 1.446272 GGTGGTCTCGAAAGCTCGG 60.446 63.158 0.00 0.00 45.49 4.63
1174 1390 3.927758 GCTCGGTTCTTTTCTAGGTCTTC 59.072 47.826 0.00 0.00 0.00 2.87
1192 1408 7.186268 AGGTCTTCTTAGTTCTAGTTGGATCT 58.814 38.462 0.00 0.00 0.00 2.75
1193 1409 7.676468 AGGTCTTCTTAGTTCTAGTTGGATCTT 59.324 37.037 0.00 0.00 0.00 2.40
1195 1411 8.524487 GTCTTCTTAGTTCTAGTTGGATCTTCA 58.476 37.037 0.00 0.00 0.00 3.02
1224 1452 2.446802 GCCGGGGAGGGAGAGATT 60.447 66.667 2.18 0.00 41.48 2.40
1226 1454 2.143419 CCGGGGAGGGAGAGATTGG 61.143 68.421 0.00 0.00 35.97 3.16
1393 1624 3.994392 GTGACATAGTTCGTCCACACATT 59.006 43.478 0.00 0.00 32.15 2.71
1630 1862 2.949177 TTACCTGAGTTGCCATGTGT 57.051 45.000 0.00 0.00 0.00 3.72
1786 2018 4.621721 GTGCACGTAAGCAGATGGCAAG 62.622 54.545 0.00 0.00 46.69 4.01
2290 2522 0.463833 GGCAGTTATCGGGACCCTTG 60.464 60.000 9.41 0.00 0.00 3.61
2291 2523 0.463833 GCAGTTATCGGGACCCTTGG 60.464 60.000 9.41 0.00 0.00 3.61
2303 2535 2.364972 ACCCTTGGTCTTTTGGTGAG 57.635 50.000 0.00 0.00 0.00 3.51
2309 2541 2.285083 TGGTCTTTTGGTGAGTTGACG 58.715 47.619 0.00 0.00 0.00 4.35
2312 2544 2.676342 GTCTTTTGGTGAGTTGACGTGT 59.324 45.455 0.00 0.00 0.00 4.49
2313 2545 2.675844 TCTTTTGGTGAGTTGACGTGTG 59.324 45.455 0.00 0.00 0.00 3.82
2314 2546 2.388310 TTTGGTGAGTTGACGTGTGA 57.612 45.000 0.00 0.00 0.00 3.58
2467 2700 1.084370 AGCAAATCGCCGTCTAGCAC 61.084 55.000 0.00 0.00 44.04 4.40
2502 2751 0.669932 CTGTCTGTGTGAGCCTGAGC 60.670 60.000 0.00 0.00 40.32 4.26
2504 2753 1.903404 TCTGTGTGAGCCTGAGCGA 60.903 57.895 0.00 0.00 46.67 4.93
2669 2991 6.717084 TGTTTGGTTGATATGTGATGTTGGTA 59.283 34.615 0.00 0.00 0.00 3.25
2706 3028 6.018542 CGTGTTTGATTGTTGTTGCGATATA 58.981 36.000 0.00 0.00 0.00 0.86
2707 3029 6.686679 CGTGTTTGATTGTTGTTGCGATATAT 59.313 34.615 0.00 0.00 0.00 0.86
2711 3033 6.299023 TGATTGTTGTTGCGATATATGACC 57.701 37.500 0.00 0.00 0.00 4.02
2712 3034 5.819901 TGATTGTTGTTGCGATATATGACCA 59.180 36.000 0.00 0.00 0.00 4.02
2789 3134 6.073222 GGTCTTTCTGTAACAGTTGGTATGTG 60.073 42.308 0.00 0.00 32.61 3.21
2834 3179 0.183731 GGATGTGGTGGGGGATCTTC 59.816 60.000 0.00 0.00 0.00 2.87
2839 3184 2.668632 GTGGGGGATCTTCGCACA 59.331 61.111 21.89 1.62 44.24 4.57
2846 3191 1.278238 GGATCTTCGCACACCTAACG 58.722 55.000 0.00 0.00 0.00 3.18
3023 3388 5.012768 TCTGGAATAACGGGTCTCTTTTTCT 59.987 40.000 0.00 0.00 0.00 2.52
3109 3476 9.000486 AGATATCATTATGTTGCAGTTCATGAG 58.000 33.333 5.32 0.00 0.00 2.90
3254 3629 2.338577 ATATGCTCTGGTCTTGTGGC 57.661 50.000 0.00 0.00 0.00 5.01
3255 3630 0.253044 TATGCTCTGGTCTTGTGGCC 59.747 55.000 0.00 0.00 0.00 5.36
3297 3676 7.628580 GCCACTAAATCTACCTGAAACATTTCC 60.629 40.741 2.00 0.00 36.36 3.13
3474 3856 7.285172 TGCATTGTGTAGGCTGTCATTTAATAT 59.715 33.333 0.00 0.00 0.00 1.28
3476 3859 8.839343 CATTGTGTAGGCTGTCATTTAATATGA 58.161 33.333 0.00 0.00 0.00 2.15
3529 3912 4.993029 TGGGTTTTCAGTTGGTAAAGTG 57.007 40.909 0.00 0.00 37.97 3.16
3637 4111 5.010012 AGTCTTGCATGAGTTTTTGGGTTAG 59.990 40.000 1.91 0.00 0.00 2.34
3681 4156 2.143876 AGTTTGCTGGTTCAGTTGGT 57.856 45.000 0.00 0.00 33.43 3.67
3873 4350 7.752239 AGAATTGTTTTCGCATCTTATTCAGTG 59.248 33.333 0.00 0.00 0.00 3.66
3916 4393 5.772521 AGTCCAGAACATGTTACAAAATGC 58.227 37.500 11.95 0.00 0.00 3.56
4199 4697 2.162120 CGCATACAACCGCGTGCTA 61.162 57.895 14.06 0.00 46.23 3.49
4253 4751 7.015682 ACCTACATATACTTCATGGACCTTCTG 59.984 40.741 0.00 0.00 0.00 3.02
4432 4930 2.920384 TACCGTGCACTGCCTCCA 60.920 61.111 16.19 0.00 0.00 3.86
4496 4994 1.141254 TGGACAGACGGCAAGGTTTTA 59.859 47.619 0.00 0.00 0.00 1.52
4497 4995 2.223745 GGACAGACGGCAAGGTTTTAA 58.776 47.619 0.00 0.00 0.00 1.52
4686 5184 0.671781 CAAGACTGCTACGGCTGCTT 60.672 55.000 0.00 0.00 40.37 3.91
4710 5208 4.202264 CCTGTAAACCTCAGTTCAGACACT 60.202 45.833 0.00 0.00 34.19 3.55
4782 5280 1.733526 GGCTTATCGGGCGCAATTT 59.266 52.632 10.83 0.00 0.00 1.82
4913 5413 3.241530 TGCAGCGAAGAGGGTGGT 61.242 61.111 0.00 0.00 35.99 4.16
5080 5580 1.577328 CCAAAAGCAGCACCGATCGT 61.577 55.000 15.09 0.00 0.00 3.73
5082 5582 1.076332 AAAAGCAGCACCGATCGTAC 58.924 50.000 15.09 2.65 0.00 3.67
5234 5734 0.178953 ACTTTTGCAGGCCATCAGGT 60.179 50.000 5.01 0.09 37.19 4.00
5300 5800 2.267351 CCATTCACGCTGCCACCAA 61.267 57.895 0.00 0.00 0.00 3.67
5723 6271 5.342433 CCGGTGTGAATTACGTGAGTTATA 58.658 41.667 0.00 0.00 46.40 0.98
5724 6272 5.981315 CCGGTGTGAATTACGTGAGTTATAT 59.019 40.000 0.00 0.00 46.40 0.86
5727 6275 7.009815 CGGTGTGAATTACGTGAGTTATATTGT 59.990 37.037 0.00 0.00 46.40 2.71
5728 6276 8.114290 GGTGTGAATTACGTGAGTTATATTGTG 58.886 37.037 0.00 0.00 46.40 3.33
5729 6277 8.865978 GTGTGAATTACGTGAGTTATATTGTGA 58.134 33.333 0.00 0.00 46.40 3.58
5732 6280 8.035984 TGAATTACGTGAGTTATATTGTGACCA 58.964 33.333 0.00 0.00 46.40 4.02
5797 6350 3.195698 GATGTCAAGGACGGCCGC 61.196 66.667 28.58 18.35 39.96 6.53
5974 6541 3.205056 AGAGGTGGATTATTGGATTGCCA 59.795 43.478 0.00 0.00 44.17 4.92
5987 6555 1.669779 GATTGCCATGTGACTCAGCTC 59.330 52.381 0.00 0.00 0.00 4.09
6142 6711 0.540597 GAGGGGCCTGTGCTCTTTTT 60.541 55.000 0.84 0.00 38.37 1.94
6143 6712 0.540597 AGGGGCCTGTGCTCTTTTTC 60.541 55.000 0.84 0.00 38.37 2.29
6150 6719 1.074566 CTGTGCTCTTTTTCCCTCCCT 59.925 52.381 0.00 0.00 0.00 4.20
6155 6724 0.698818 TCTTTTTCCCTCCCTCTGCC 59.301 55.000 0.00 0.00 0.00 4.85
6156 6725 0.405585 CTTTTTCCCTCCCTCTGCCA 59.594 55.000 0.00 0.00 0.00 4.92
6158 6727 0.772124 TTTTCCCTCCCTCTGCCACT 60.772 55.000 0.00 0.00 0.00 4.00
6160 6729 4.106925 CCCTCCCTCTGCCACTGC 62.107 72.222 0.00 0.00 38.26 4.40
6161 6730 4.463879 CCTCCCTCTGCCACTGCG 62.464 72.222 0.00 0.00 41.78 5.18
6267 6868 3.945921 CAGATGATGAGCCAGTTGATTGT 59.054 43.478 0.00 0.00 0.00 2.71
6268 6869 5.121105 CAGATGATGAGCCAGTTGATTGTA 58.879 41.667 0.00 0.00 0.00 2.41
6399 7073 7.013178 GCCTCCAAATTCAAAATTCCTGAAAAA 59.987 33.333 6.93 0.00 36.43 1.94
6458 7134 7.872113 AAAATAAAGAGGTAGATGAAGGCAG 57.128 36.000 0.00 0.00 0.00 4.85
6460 7136 7.385894 AATAAAGAGGTAGATGAAGGCAGAT 57.614 36.000 0.00 0.00 0.00 2.90
6594 7286 5.509501 CCTGAAATTTTGCACACATACACCT 60.510 40.000 0.00 0.00 0.00 4.00
6617 7309 6.655003 CCTCACATCCTTGTTTACTTGTACAT 59.345 38.462 0.00 0.00 32.34 2.29
6618 7310 7.174946 CCTCACATCCTTGTTTACTTGTACATT 59.825 37.037 0.00 0.00 32.34 2.71
6644 7336 6.410243 TTTTTCAGCTGTTTTTAAAACCGG 57.590 33.333 14.67 0.00 0.00 5.28
6654 7346 7.219372 TGTTTTTAAAACCGGAATTTTCGAC 57.781 32.000 9.46 7.12 33.80 4.20
6700 7483 4.843220 CTCCATGGAGGCATAACATTTC 57.157 45.455 31.14 0.00 38.51 2.17
6701 7484 4.467769 CTCCATGGAGGCATAACATTTCT 58.532 43.478 31.14 0.00 38.51 2.52
6702 7485 4.870636 TCCATGGAGGCATAACATTTCTT 58.129 39.130 11.44 0.00 37.29 2.52
6706 7489 6.096705 CCATGGAGGCATAACATTTCTTTACA 59.903 38.462 5.56 0.00 0.00 2.41
6707 7490 6.757897 TGGAGGCATAACATTTCTTTACAG 57.242 37.500 0.00 0.00 0.00 2.74
6708 7491 6.480763 TGGAGGCATAACATTTCTTTACAGA 58.519 36.000 0.00 0.00 0.00 3.41
6709 7492 6.599244 TGGAGGCATAACATTTCTTTACAGAG 59.401 38.462 0.00 0.00 0.00 3.35
6710 7493 6.823689 GGAGGCATAACATTTCTTTACAGAGA 59.176 38.462 0.00 0.00 0.00 3.10
6711 7494 7.500559 GGAGGCATAACATTTCTTTACAGAGAT 59.499 37.037 0.00 0.00 0.00 2.75
6751 7534 7.410728 GCAAACAGGACATGAATAAAAACATCG 60.411 37.037 0.00 0.00 0.00 3.84
6770 7834 3.959293 TCGTGTGATCTACAAGGAGGTA 58.041 45.455 9.82 0.00 41.89 3.08
6783 7847 8.059461 TCTACAAGGAGGTATAAGATTGACAGA 58.941 37.037 0.00 0.00 0.00 3.41
6824 7891 7.801716 AAAAGCAGAAACACAGATGTACTTA 57.198 32.000 0.00 0.00 38.45 2.24
6825 7892 6.787085 AAGCAGAAACACAGATGTACTTAC 57.213 37.500 0.00 0.00 38.45 2.34
6826 7893 6.102897 AGCAGAAACACAGATGTACTTACT 57.897 37.500 0.00 0.00 38.45 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.742201 GAGCTGCGGCCGAACAGA 62.742 66.667 33.48 5.10 39.73 3.41
3 4 4.617520 TTGAGCTGCGGCCGAACA 62.618 61.111 33.48 18.03 39.73 3.18
4 5 3.353836 TTTGAGCTGCGGCCGAAC 61.354 61.111 33.48 17.39 39.73 3.95
5 6 3.353836 GTTTGAGCTGCGGCCGAA 61.354 61.111 33.48 20.72 39.73 4.30
8 9 2.548127 GATTGGTTTGAGCTGCGGCC 62.548 60.000 15.55 6.47 39.73 6.13
9 10 1.153958 GATTGGTTTGAGCTGCGGC 60.154 57.895 10.33 10.33 39.06 6.53
10 11 0.962356 AGGATTGGTTTGAGCTGCGG 60.962 55.000 0.00 0.00 0.00 5.69
11 12 0.883833 AAGGATTGGTTTGAGCTGCG 59.116 50.000 0.00 0.00 0.00 5.18
12 13 4.519540 TTTAAGGATTGGTTTGAGCTGC 57.480 40.909 0.00 0.00 0.00 5.25
13 14 6.366877 CACATTTTAAGGATTGGTTTGAGCTG 59.633 38.462 0.00 0.00 0.00 4.24
14 15 6.041979 ACACATTTTAAGGATTGGTTTGAGCT 59.958 34.615 0.00 0.00 0.00 4.09
15 16 6.223120 ACACATTTTAAGGATTGGTTTGAGC 58.777 36.000 0.00 0.00 0.00 4.26
16 17 8.661352 AAACACATTTTAAGGATTGGTTTGAG 57.339 30.769 0.00 0.00 0.00 3.02
17 18 9.103861 GAAAACACATTTTAAGGATTGGTTTGA 57.896 29.630 0.00 0.00 38.17 2.69
18 19 8.341903 GGAAAACACATTTTAAGGATTGGTTTG 58.658 33.333 0.00 0.00 38.17 2.93
19 20 7.225734 CGGAAAACACATTTTAAGGATTGGTTT 59.774 33.333 0.00 0.00 38.17 3.27
20 21 6.704050 CGGAAAACACATTTTAAGGATTGGTT 59.296 34.615 0.00 0.00 38.17 3.67
21 22 6.220201 CGGAAAACACATTTTAAGGATTGGT 58.780 36.000 0.00 0.00 38.17 3.67
22 23 5.120053 GCGGAAAACACATTTTAAGGATTGG 59.880 40.000 0.00 0.00 38.17 3.16
23 24 5.164100 CGCGGAAAACACATTTTAAGGATTG 60.164 40.000 0.00 0.00 38.17 2.67
24 25 4.920927 CGCGGAAAACACATTTTAAGGATT 59.079 37.500 0.00 0.00 38.17 3.01
25 26 4.022676 ACGCGGAAAACACATTTTAAGGAT 60.023 37.500 12.47 0.00 38.17 3.24
26 27 3.315749 ACGCGGAAAACACATTTTAAGGA 59.684 39.130 12.47 0.00 38.17 3.36
27 28 3.634283 ACGCGGAAAACACATTTTAAGG 58.366 40.909 12.47 0.00 38.17 2.69
28 29 5.629348 AAACGCGGAAAACACATTTTAAG 57.371 34.783 12.47 0.00 38.17 1.85
29 30 5.575606 TGAAAACGCGGAAAACACATTTTAA 59.424 32.000 12.47 0.00 38.17 1.52
30 31 5.100259 TGAAAACGCGGAAAACACATTTTA 58.900 33.333 12.47 0.00 38.17 1.52
31 32 3.927142 TGAAAACGCGGAAAACACATTTT 59.073 34.783 12.47 4.39 40.83 1.82
32 33 3.512680 TGAAAACGCGGAAAACACATTT 58.487 36.364 12.47 0.00 0.00 2.32
33 34 3.112580 CTGAAAACGCGGAAAACACATT 58.887 40.909 12.47 0.00 0.00 2.71
34 35 2.098443 ACTGAAAACGCGGAAAACACAT 59.902 40.909 12.47 0.00 0.00 3.21
35 36 1.469308 ACTGAAAACGCGGAAAACACA 59.531 42.857 12.47 0.18 0.00 3.72
36 37 2.182904 ACTGAAAACGCGGAAAACAC 57.817 45.000 12.47 0.00 0.00 3.32
37 38 2.478200 GGAACTGAAAACGCGGAAAACA 60.478 45.455 12.47 3.01 0.00 2.83
38 39 2.114056 GGAACTGAAAACGCGGAAAAC 58.886 47.619 12.47 0.00 0.00 2.43
39 40 1.743958 TGGAACTGAAAACGCGGAAAA 59.256 42.857 12.47 0.00 0.00 2.29
40 41 1.064357 GTGGAACTGAAAACGCGGAAA 59.936 47.619 12.47 0.00 0.00 3.13
41 42 0.658897 GTGGAACTGAAAACGCGGAA 59.341 50.000 12.47 0.00 0.00 4.30
42 43 1.492319 CGTGGAACTGAAAACGCGGA 61.492 55.000 12.47 0.00 33.65 5.54
43 44 1.083015 CGTGGAACTGAAAACGCGG 60.083 57.895 12.47 0.00 33.65 6.46
44 45 4.489683 CGTGGAACTGAAAACGCG 57.510 55.556 3.53 3.53 31.75 6.01
46 47 2.468532 AAAGCGTGGAACTGAAAACG 57.531 45.000 0.00 0.00 39.00 3.60
47 48 4.738252 CCTTAAAAGCGTGGAACTGAAAAC 59.262 41.667 0.00 0.00 31.75 2.43
48 49 4.641094 TCCTTAAAAGCGTGGAACTGAAAA 59.359 37.500 0.00 0.00 31.75 2.29
49 50 4.200874 TCCTTAAAAGCGTGGAACTGAAA 58.799 39.130 0.00 0.00 31.75 2.69
50 51 3.811083 TCCTTAAAAGCGTGGAACTGAA 58.189 40.909 0.00 0.00 31.75 3.02
51 52 3.478857 TCCTTAAAAGCGTGGAACTGA 57.521 42.857 0.00 0.00 31.75 3.41
52 53 5.730568 GCATATCCTTAAAAGCGTGGAACTG 60.731 44.000 0.00 0.00 31.87 3.16
53 54 4.335594 GCATATCCTTAAAAGCGTGGAACT 59.664 41.667 0.00 0.00 31.87 3.01
54 55 4.335594 AGCATATCCTTAAAAGCGTGGAAC 59.664 41.667 0.00 0.00 31.87 3.62
55 56 4.523083 AGCATATCCTTAAAAGCGTGGAA 58.477 39.130 0.00 0.00 31.87 3.53
56 57 4.150897 AGCATATCCTTAAAAGCGTGGA 57.849 40.909 0.00 0.00 0.00 4.02
57 58 5.297547 TCTAGCATATCCTTAAAAGCGTGG 58.702 41.667 0.00 0.00 0.00 4.94
58 59 8.598924 CATATCTAGCATATCCTTAAAAGCGTG 58.401 37.037 0.00 0.00 0.00 5.34
59 60 7.278868 GCATATCTAGCATATCCTTAAAAGCGT 59.721 37.037 0.00 0.00 0.00 5.07
60 61 7.493971 AGCATATCTAGCATATCCTTAAAAGCG 59.506 37.037 0.00 0.00 0.00 4.68
61 62 8.729805 AGCATATCTAGCATATCCTTAAAAGC 57.270 34.615 0.00 0.00 0.00 3.51
74 75 9.440773 CAAACCATTATAAGAGCATATCTAGCA 57.559 33.333 0.00 0.00 37.23 3.49
75 76 9.442047 ACAAACCATTATAAGAGCATATCTAGC 57.558 33.333 0.00 0.00 37.23 3.42
81 82 9.778741 CTCCTTACAAACCATTATAAGAGCATA 57.221 33.333 0.00 0.00 0.00 3.14
82 83 8.275040 ACTCCTTACAAACCATTATAAGAGCAT 58.725 33.333 0.00 0.00 0.00 3.79
83 84 7.630082 ACTCCTTACAAACCATTATAAGAGCA 58.370 34.615 0.00 0.00 0.00 4.26
84 85 9.043079 GTACTCCTTACAAACCATTATAAGAGC 57.957 37.037 0.00 0.00 0.00 4.09
98 99 9.101655 GTTTGAGTTACTTTGTACTCCTTACAA 57.898 33.333 0.00 0.00 46.93 2.41
99 100 7.436080 CGTTTGAGTTACTTTGTACTCCTTACA 59.564 37.037 0.00 0.00 40.00 2.41
100 101 7.568315 GCGTTTGAGTTACTTTGTACTCCTTAC 60.568 40.741 0.00 0.00 40.00 2.34
101 102 6.421801 GCGTTTGAGTTACTTTGTACTCCTTA 59.578 38.462 0.00 0.00 40.00 2.69
102 103 5.235831 GCGTTTGAGTTACTTTGTACTCCTT 59.764 40.000 0.00 0.00 40.00 3.36
103 104 4.748600 GCGTTTGAGTTACTTTGTACTCCT 59.251 41.667 0.00 0.00 40.00 3.69
104 105 4.508861 TGCGTTTGAGTTACTTTGTACTCC 59.491 41.667 0.00 0.00 40.00 3.85
105 106 5.646467 TGCGTTTGAGTTACTTTGTACTC 57.354 39.130 0.00 0.00 40.89 2.59
106 107 6.613755 ATTGCGTTTGAGTTACTTTGTACT 57.386 33.333 0.00 0.00 0.00 2.73
107 108 8.770850 TTTATTGCGTTTGAGTTACTTTGTAC 57.229 30.769 0.00 0.00 0.00 2.90
108 109 9.953697 ATTTTATTGCGTTTGAGTTACTTTGTA 57.046 25.926 0.00 0.00 0.00 2.41
109 110 8.865590 ATTTTATTGCGTTTGAGTTACTTTGT 57.134 26.923 0.00 0.00 0.00 2.83
113 114 9.953697 TGTAAATTTTATTGCGTTTGAGTTACT 57.046 25.926 0.00 0.00 0.00 2.24
117 118 9.469807 TCAATGTAAATTTTATTGCGTTTGAGT 57.530 25.926 16.81 0.00 33.10 3.41
118 119 9.941991 CTCAATGTAAATTTTATTGCGTTTGAG 57.058 29.630 16.81 11.29 34.65 3.02
119 120 8.920665 CCTCAATGTAAATTTTATTGCGTTTGA 58.079 29.630 16.81 7.41 33.10 2.69
120 121 8.920665 TCCTCAATGTAAATTTTATTGCGTTTG 58.079 29.630 16.81 8.12 33.10 2.93
121 122 8.921670 GTCCTCAATGTAAATTTTATTGCGTTT 58.078 29.630 16.81 0.00 33.10 3.60
122 123 7.544217 GGTCCTCAATGTAAATTTTATTGCGTT 59.456 33.333 16.81 0.00 33.10 4.84
123 124 7.033185 GGTCCTCAATGTAAATTTTATTGCGT 58.967 34.615 16.81 0.00 33.10 5.24
124 125 6.475402 GGGTCCTCAATGTAAATTTTATTGCG 59.525 38.462 16.81 13.03 33.10 4.85
125 126 7.555965 AGGGTCCTCAATGTAAATTTTATTGC 58.444 34.615 16.81 7.95 33.10 3.56
127 128 9.762381 TGTAGGGTCCTCAATGTAAATTTTATT 57.238 29.630 0.00 0.00 0.00 1.40
128 129 9.185680 GTGTAGGGTCCTCAATGTAAATTTTAT 57.814 33.333 0.00 0.00 0.00 1.40
129 130 7.612633 GGTGTAGGGTCCTCAATGTAAATTTTA 59.387 37.037 0.00 0.00 0.00 1.52
130 131 6.436218 GGTGTAGGGTCCTCAATGTAAATTTT 59.564 38.462 0.00 0.00 0.00 1.82
131 132 5.949952 GGTGTAGGGTCCTCAATGTAAATTT 59.050 40.000 0.00 0.00 0.00 1.82
132 133 5.014755 TGGTGTAGGGTCCTCAATGTAAATT 59.985 40.000 0.00 0.00 0.00 1.82
133 134 4.538490 TGGTGTAGGGTCCTCAATGTAAAT 59.462 41.667 0.00 0.00 0.00 1.40
134 135 3.911260 TGGTGTAGGGTCCTCAATGTAAA 59.089 43.478 0.00 0.00 0.00 2.01
135 136 3.262405 GTGGTGTAGGGTCCTCAATGTAA 59.738 47.826 0.00 0.00 0.00 2.41
136 137 2.835764 GTGGTGTAGGGTCCTCAATGTA 59.164 50.000 0.00 0.00 0.00 2.29
137 138 1.628846 GTGGTGTAGGGTCCTCAATGT 59.371 52.381 0.00 0.00 0.00 2.71
138 139 1.405526 CGTGGTGTAGGGTCCTCAATG 60.406 57.143 0.00 0.00 0.00 2.82
139 140 0.902531 CGTGGTGTAGGGTCCTCAAT 59.097 55.000 0.00 0.00 0.00 2.57
140 141 1.189524 CCGTGGTGTAGGGTCCTCAA 61.190 60.000 0.00 0.00 0.00 3.02
141 142 1.608336 CCGTGGTGTAGGGTCCTCA 60.608 63.158 0.00 0.00 0.00 3.86
142 143 0.901580 TTCCGTGGTGTAGGGTCCTC 60.902 60.000 0.00 0.00 35.77 3.71
143 144 1.156803 TTCCGTGGTGTAGGGTCCT 59.843 57.895 0.00 0.00 35.77 3.85
144 145 1.294459 GTTCCGTGGTGTAGGGTCC 59.706 63.158 0.00 0.00 35.77 4.46
145 146 1.080298 CGTTCCGTGGTGTAGGGTC 60.080 63.158 0.00 0.00 35.77 4.46
146 147 0.901580 ATCGTTCCGTGGTGTAGGGT 60.902 55.000 0.00 0.00 35.77 4.34
147 148 0.179119 GATCGTTCCGTGGTGTAGGG 60.179 60.000 0.00 0.00 35.61 3.53
148 149 0.528924 TGATCGTTCCGTGGTGTAGG 59.471 55.000 0.00 0.00 0.00 3.18
149 150 1.201647 AGTGATCGTTCCGTGGTGTAG 59.798 52.381 0.00 0.00 0.00 2.74
150 151 1.250328 AGTGATCGTTCCGTGGTGTA 58.750 50.000 0.00 0.00 0.00 2.90
151 152 1.068055 GTAGTGATCGTTCCGTGGTGT 60.068 52.381 0.00 0.00 0.00 4.16
152 153 1.201647 AGTAGTGATCGTTCCGTGGTG 59.798 52.381 0.00 0.00 0.00 4.17
153 154 1.542492 AGTAGTGATCGTTCCGTGGT 58.458 50.000 0.00 0.00 0.00 4.16
154 155 2.681848 ACTAGTAGTGATCGTTCCGTGG 59.318 50.000 0.85 0.00 0.00 4.94
167 168 1.093159 CTCGTTCCGGCACTAGTAGT 58.907 55.000 1.96 0.00 0.00 2.73
168 169 1.093159 ACTCGTTCCGGCACTAGTAG 58.907 55.000 9.63 1.06 0.00 2.57
169 170 1.200716 CAACTCGTTCCGGCACTAGTA 59.799 52.381 11.62 0.00 0.00 1.82
170 171 0.038526 CAACTCGTTCCGGCACTAGT 60.039 55.000 5.58 5.58 0.00 2.57
171 172 0.038526 ACAACTCGTTCCGGCACTAG 60.039 55.000 4.22 4.22 0.00 2.57
172 173 0.038892 GACAACTCGTTCCGGCACTA 60.039 55.000 1.96 0.00 0.00 2.74
173 174 1.300697 GACAACTCGTTCCGGCACT 60.301 57.895 1.96 0.00 0.00 4.40
174 175 2.654912 CGACAACTCGTTCCGGCAC 61.655 63.158 0.00 0.00 35.00 5.01
175 176 2.355363 CGACAACTCGTTCCGGCA 60.355 61.111 0.00 0.00 35.00 5.69
176 177 3.110178 CCGACAACTCGTTCCGGC 61.110 66.667 0.00 0.00 38.32 6.13
177 178 3.110178 GCCGACAACTCGTTCCGG 61.110 66.667 12.86 12.86 38.32 5.14
178 179 2.355363 TGCCGACAACTCGTTCCG 60.355 61.111 0.00 0.00 38.32 4.30
179 180 0.949105 ATGTGCCGACAACTCGTTCC 60.949 55.000 0.00 0.00 38.32 3.62
180 181 0.438830 GATGTGCCGACAACTCGTTC 59.561 55.000 0.00 0.00 38.32 3.95
181 182 1.282248 CGATGTGCCGACAACTCGTT 61.282 55.000 0.00 0.00 38.32 3.85
182 183 1.733041 CGATGTGCCGACAACTCGT 60.733 57.895 0.00 0.00 38.32 4.18
183 184 1.282248 AACGATGTGCCGACAACTCG 61.282 55.000 3.25 3.25 39.83 4.18
184 185 0.163788 CAACGATGTGCCGACAACTC 59.836 55.000 0.00 0.00 35.11 3.01
185 186 0.531974 ACAACGATGTGCCGACAACT 60.532 50.000 0.00 0.00 38.69 3.16
186 187 0.110823 GACAACGATGTGCCGACAAC 60.111 55.000 1.86 0.00 40.74 3.32
187 188 1.553195 CGACAACGATGTGCCGACAA 61.553 55.000 1.86 0.00 40.74 3.18
188 189 2.019408 CGACAACGATGTGCCGACA 61.019 57.895 1.86 0.00 40.74 4.35
189 190 2.769617 CGACAACGATGTGCCGAC 59.230 61.111 1.86 0.00 40.74 4.79
190 191 3.109547 GCGACAACGATGTGCCGA 61.110 61.111 1.86 0.00 40.74 5.54
191 192 4.147322 GGCGACAACGATGTGCCG 62.147 66.667 18.22 11.55 40.96 5.69
192 193 2.740714 GAGGCGACAACGATGTGCC 61.741 63.158 22.54 22.54 45.86 5.01
193 194 1.687494 GAGAGGCGACAACGATGTGC 61.687 60.000 1.86 7.33 40.74 4.57
194 195 1.078759 GGAGAGGCGACAACGATGTG 61.079 60.000 1.86 0.00 40.74 3.21
195 196 1.215647 GGAGAGGCGACAACGATGT 59.784 57.895 0.00 0.00 44.25 3.06
196 197 0.526524 GAGGAGAGGCGACAACGATG 60.527 60.000 0.00 0.00 42.66 3.84
197 198 0.681564 AGAGGAGAGGCGACAACGAT 60.682 55.000 0.00 0.00 42.66 3.73
198 199 1.303398 AGAGGAGAGGCGACAACGA 60.303 57.895 0.00 0.00 42.66 3.85
199 200 1.137825 GAGAGGAGAGGCGACAACG 59.862 63.158 0.00 0.00 42.93 4.10
200 201 1.513622 GGAGAGGAGAGGCGACAAC 59.486 63.158 0.00 0.00 0.00 3.32
201 202 1.682684 GGGAGAGGAGAGGCGACAA 60.683 63.158 0.00 0.00 0.00 3.18
202 203 2.043852 GGGAGAGGAGAGGCGACA 60.044 66.667 0.00 0.00 0.00 4.35
203 204 3.213402 CGGGAGAGGAGAGGCGAC 61.213 72.222 0.00 0.00 0.00 5.19
204 205 4.507916 CCGGGAGAGGAGAGGCGA 62.508 72.222 0.00 0.00 0.00 5.54
205 206 4.507916 TCCGGGAGAGGAGAGGCG 62.508 72.222 0.00 0.00 34.92 5.52
219 220 2.892425 GTCATCAAGCCGGCTCCG 60.892 66.667 32.93 24.15 39.44 4.63
220 221 0.749454 ATTGTCATCAAGCCGGCTCC 60.749 55.000 32.93 13.80 36.97 4.70
221 222 0.659957 GATTGTCATCAAGCCGGCTC 59.340 55.000 32.93 17.08 36.97 4.70
222 223 0.035152 TGATTGTCATCAAGCCGGCT 60.035 50.000 27.08 27.08 38.95 5.52
223 224 0.379669 CTGATTGTCATCAAGCCGGC 59.620 55.000 21.89 21.89 39.04 6.13
224 225 2.028420 TCTGATTGTCATCAAGCCGG 57.972 50.000 0.00 0.00 39.04 6.13
225 226 3.264947 TCTTCTGATTGTCATCAAGCCG 58.735 45.455 0.00 0.00 39.04 5.52
226 227 4.260170 ACTCTTCTGATTGTCATCAAGCC 58.740 43.478 0.00 0.00 39.04 4.35
227 228 5.177326 AGACTCTTCTGATTGTCATCAAGC 58.823 41.667 0.00 0.00 39.04 4.01
228 229 7.519843 CAAAGACTCTTCTGATTGTCATCAAG 58.480 38.462 0.00 0.00 39.04 3.02
229 230 6.072838 GCAAAGACTCTTCTGATTGTCATCAA 60.073 38.462 0.00 0.00 39.04 2.57
230 231 5.410746 GCAAAGACTCTTCTGATTGTCATCA 59.589 40.000 0.00 0.00 37.05 3.07
231 232 5.642919 AGCAAAGACTCTTCTGATTGTCATC 59.357 40.000 0.00 0.00 29.98 2.92
232 233 5.558818 AGCAAAGACTCTTCTGATTGTCAT 58.441 37.500 0.00 0.00 29.98 3.06
233 234 4.965814 AGCAAAGACTCTTCTGATTGTCA 58.034 39.130 0.00 0.00 29.98 3.58
234 235 4.091220 CGAGCAAAGACTCTTCTGATTGTC 59.909 45.833 0.00 0.00 34.35 3.18
235 236 3.993081 CGAGCAAAGACTCTTCTGATTGT 59.007 43.478 0.00 0.00 34.35 2.71
236 237 3.181522 GCGAGCAAAGACTCTTCTGATTG 60.182 47.826 0.00 0.00 34.35 2.67
237 238 2.999355 GCGAGCAAAGACTCTTCTGATT 59.001 45.455 0.00 0.00 34.35 2.57
238 239 2.028658 TGCGAGCAAAGACTCTTCTGAT 60.029 45.455 0.00 0.00 34.35 2.90
239 240 1.341209 TGCGAGCAAAGACTCTTCTGA 59.659 47.619 0.00 0.00 34.35 3.27
240 241 1.788258 TGCGAGCAAAGACTCTTCTG 58.212 50.000 0.00 0.00 34.35 3.02
241 242 2.289320 ACATGCGAGCAAAGACTCTTCT 60.289 45.455 0.57 0.00 34.35 2.85
242 243 2.072298 ACATGCGAGCAAAGACTCTTC 58.928 47.619 0.57 0.00 34.35 2.87
243 244 2.072298 GACATGCGAGCAAAGACTCTT 58.928 47.619 0.57 0.00 34.35 2.85
244 245 1.274728 AGACATGCGAGCAAAGACTCT 59.725 47.619 0.57 0.00 34.35 3.24
245 246 1.658095 GAGACATGCGAGCAAAGACTC 59.342 52.381 0.57 9.26 0.00 3.36
246 247 1.674221 GGAGACATGCGAGCAAAGACT 60.674 52.381 0.57 3.89 0.00 3.24
247 248 0.723981 GGAGACATGCGAGCAAAGAC 59.276 55.000 0.57 0.00 0.00 3.01
248 249 0.321346 TGGAGACATGCGAGCAAAGA 59.679 50.000 0.57 0.00 33.40 2.52
249 250 2.845019 TGGAGACATGCGAGCAAAG 58.155 52.632 0.57 0.48 33.40 2.77
261 262 1.673168 GGTTGCTGATCCATGGAGAC 58.327 55.000 21.33 16.49 0.00 3.36
262 263 0.548031 GGGTTGCTGATCCATGGAGA 59.452 55.000 21.33 8.33 0.00 3.71
263 264 0.256752 TGGGTTGCTGATCCATGGAG 59.743 55.000 21.33 7.89 0.00 3.86
264 265 0.256752 CTGGGTTGCTGATCCATGGA 59.743 55.000 18.88 18.88 0.00 3.41
265 266 0.256752 TCTGGGTTGCTGATCCATGG 59.743 55.000 4.97 4.97 0.00 3.66
266 267 1.676746 CTCTGGGTTGCTGATCCATG 58.323 55.000 0.00 0.00 0.00 3.66
267 268 0.106819 GCTCTGGGTTGCTGATCCAT 60.107 55.000 0.00 0.00 0.00 3.41
268 269 1.300963 GCTCTGGGTTGCTGATCCA 59.699 57.895 0.00 0.00 0.00 3.41
269 270 1.452833 GGCTCTGGGTTGCTGATCC 60.453 63.158 0.00 0.00 0.00 3.36
270 271 1.817099 CGGCTCTGGGTTGCTGATC 60.817 63.158 0.00 0.00 37.75 2.92
271 272 2.270205 CGGCTCTGGGTTGCTGAT 59.730 61.111 0.00 0.00 37.75 2.90
272 273 3.240134 GACGGCTCTGGGTTGCTGA 62.240 63.158 0.00 0.00 38.78 4.26
273 274 2.743928 GACGGCTCTGGGTTGCTG 60.744 66.667 0.00 0.00 41.02 4.41
274 275 4.379243 CGACGGCTCTGGGTTGCT 62.379 66.667 0.00 0.00 0.00 3.91
275 276 4.681978 ACGACGGCTCTGGGTTGC 62.682 66.667 0.00 0.00 0.00 4.17
276 277 2.432628 GACGACGGCTCTGGGTTG 60.433 66.667 0.00 0.00 0.00 3.77
277 278 4.052229 CGACGACGGCTCTGGGTT 62.052 66.667 0.00 0.00 35.72 4.11
279 280 4.477975 GACGACGACGGCTCTGGG 62.478 72.222 12.58 0.00 45.04 4.45
280 281 4.813526 CGACGACGACGGCTCTGG 62.814 72.222 12.01 0.00 46.46 3.86
289 290 2.483745 GTCAGATGGCGACGACGA 59.516 61.111 12.29 0.00 42.66 4.20
290 291 2.579787 GGTCAGATGGCGACGACG 60.580 66.667 2.12 2.12 42.93 5.12
291 292 2.202756 GGGTCAGATGGCGACGAC 60.203 66.667 0.00 0.00 34.04 4.34
292 293 0.681887 TAAGGGTCAGATGGCGACGA 60.682 55.000 0.00 0.00 34.04 4.20
293 294 0.174845 TTAAGGGTCAGATGGCGACG 59.825 55.000 0.00 0.00 34.04 5.12
294 295 2.396590 TTTAAGGGTCAGATGGCGAC 57.603 50.000 0.00 0.00 0.00 5.19
295 296 2.503765 TGATTTAAGGGTCAGATGGCGA 59.496 45.455 0.00 0.00 0.00 5.54
296 297 2.917933 TGATTTAAGGGTCAGATGGCG 58.082 47.619 0.00 0.00 0.00 5.69
297 298 5.859205 AATTGATTTAAGGGTCAGATGGC 57.141 39.130 0.00 0.00 0.00 4.40
298 299 7.408756 TCAAATTGATTTAAGGGTCAGATGG 57.591 36.000 0.00 0.00 0.00 3.51
299 300 7.490402 GCTTCAAATTGATTTAAGGGTCAGATG 59.510 37.037 0.00 0.00 0.00 2.90
300 301 7.178983 TGCTTCAAATTGATTTAAGGGTCAGAT 59.821 33.333 0.00 0.00 0.00 2.90
301 302 6.493115 TGCTTCAAATTGATTTAAGGGTCAGA 59.507 34.615 0.00 0.00 0.00 3.27
302 303 6.587608 GTGCTTCAAATTGATTTAAGGGTCAG 59.412 38.462 0.00 0.00 0.00 3.51
303 304 6.267471 AGTGCTTCAAATTGATTTAAGGGTCA 59.733 34.615 0.00 0.00 0.00 4.02
304 305 6.691508 AGTGCTTCAAATTGATTTAAGGGTC 58.308 36.000 0.00 0.00 0.00 4.46
305 306 6.670695 AGTGCTTCAAATTGATTTAAGGGT 57.329 33.333 0.00 0.00 0.00 4.34
306 307 7.116805 GTCAAGTGCTTCAAATTGATTTAAGGG 59.883 37.037 0.00 0.00 34.45 3.95
307 308 7.652909 TGTCAAGTGCTTCAAATTGATTTAAGG 59.347 33.333 0.00 0.00 34.45 2.69
308 309 8.578308 TGTCAAGTGCTTCAAATTGATTTAAG 57.422 30.769 0.00 0.00 34.45 1.85
309 310 9.545105 AATGTCAAGTGCTTCAAATTGATTTAA 57.455 25.926 0.00 0.00 34.45 1.52
311 312 9.545105 TTAATGTCAAGTGCTTCAAATTGATTT 57.455 25.926 0.00 0.00 34.45 2.17
312 313 9.545105 TTTAATGTCAAGTGCTTCAAATTGATT 57.455 25.926 0.00 0.00 34.45 2.57
313 314 8.981647 GTTTAATGTCAAGTGCTTCAAATTGAT 58.018 29.630 0.00 0.00 34.45 2.57
314 315 7.437862 GGTTTAATGTCAAGTGCTTCAAATTGA 59.562 33.333 0.00 0.00 0.00 2.57
315 316 7.439056 AGGTTTAATGTCAAGTGCTTCAAATTG 59.561 33.333 0.00 0.00 0.00 2.32
316 317 7.500141 AGGTTTAATGTCAAGTGCTTCAAATT 58.500 30.769 0.00 0.00 0.00 1.82
317 318 7.054491 AGGTTTAATGTCAAGTGCTTCAAAT 57.946 32.000 0.00 0.00 0.00 2.32
318 319 6.463995 AGGTTTAATGTCAAGTGCTTCAAA 57.536 33.333 0.00 0.00 0.00 2.69
319 320 5.277779 CGAGGTTTAATGTCAAGTGCTTCAA 60.278 40.000 0.00 0.00 0.00 2.69
320 321 4.213270 CGAGGTTTAATGTCAAGTGCTTCA 59.787 41.667 0.00 0.00 0.00 3.02
321 322 4.712763 CGAGGTTTAATGTCAAGTGCTTC 58.287 43.478 0.00 0.00 0.00 3.86
322 323 3.058224 GCGAGGTTTAATGTCAAGTGCTT 60.058 43.478 0.00 0.00 0.00 3.91
323 324 2.484264 GCGAGGTTTAATGTCAAGTGCT 59.516 45.455 0.00 0.00 0.00 4.40
324 325 2.414161 GGCGAGGTTTAATGTCAAGTGC 60.414 50.000 0.00 0.00 0.00 4.40
325 326 2.159707 CGGCGAGGTTTAATGTCAAGTG 60.160 50.000 0.00 0.00 0.00 3.16
326 327 2.073816 CGGCGAGGTTTAATGTCAAGT 58.926 47.619 0.00 0.00 0.00 3.16
327 328 1.396996 CCGGCGAGGTTTAATGTCAAG 59.603 52.381 9.30 0.00 34.51 3.02
328 329 1.444836 CCGGCGAGGTTTAATGTCAA 58.555 50.000 9.30 0.00 34.51 3.18
329 330 3.146783 CCGGCGAGGTTTAATGTCA 57.853 52.632 9.30 0.00 34.51 3.58
351 352 3.461982 CTCGTCGTGCGTGAGTGC 61.462 66.667 0.00 0.00 42.13 4.40
352 353 0.933047 TTTCTCGTCGTGCGTGAGTG 60.933 55.000 13.03 0.60 42.78 3.51
353 354 0.933509 GTTTCTCGTCGTGCGTGAGT 60.934 55.000 13.03 0.00 42.78 3.41
354 355 1.606350 GGTTTCTCGTCGTGCGTGAG 61.606 60.000 9.17 9.17 42.78 3.51
355 356 1.659335 GGTTTCTCGTCGTGCGTGA 60.659 57.895 0.00 3.19 40.69 4.35
356 357 2.654912 GGGTTTCTCGTCGTGCGTG 61.655 63.158 0.00 1.07 42.13 5.34
357 358 2.355481 GGGTTTCTCGTCGTGCGT 60.355 61.111 0.00 0.00 42.13 5.24
358 359 3.110178 GGGGTTTCTCGTCGTGCG 61.110 66.667 0.00 0.00 43.01 5.34
359 360 3.110178 CGGGGTTTCTCGTCGTGC 61.110 66.667 0.00 0.00 0.00 5.34
360 361 3.110178 GCGGGGTTTCTCGTCGTG 61.110 66.667 0.00 0.00 0.00 4.35
361 362 4.368543 GGCGGGGTTTCTCGTCGT 62.369 66.667 0.00 0.00 0.00 4.34
362 363 3.584868 AAGGCGGGGTTTCTCGTCG 62.585 63.158 0.00 0.00 36.00 5.12
363 364 2.033194 CAAGGCGGGGTTTCTCGTC 61.033 63.158 0.00 0.00 0.00 4.20
364 365 2.032071 CAAGGCGGGGTTTCTCGT 59.968 61.111 0.00 0.00 0.00 4.18
365 366 2.033194 GTCAAGGCGGGGTTTCTCG 61.033 63.158 0.00 0.00 0.00 4.04
366 367 1.674651 GGTCAAGGCGGGGTTTCTC 60.675 63.158 0.00 0.00 0.00 2.87
367 368 2.125766 GAGGTCAAGGCGGGGTTTCT 62.126 60.000 0.00 0.00 0.00 2.52
368 369 1.674651 GAGGTCAAGGCGGGGTTTC 60.675 63.158 0.00 0.00 0.00 2.78
369 370 2.434774 GAGGTCAAGGCGGGGTTT 59.565 61.111 0.00 0.00 0.00 3.27
370 371 2.852075 TGAGGTCAAGGCGGGGTT 60.852 61.111 0.00 0.00 0.00 4.11
371 372 3.637273 GTGAGGTCAAGGCGGGGT 61.637 66.667 0.00 0.00 0.00 4.95
372 373 4.410400 GGTGAGGTCAAGGCGGGG 62.410 72.222 0.00 0.00 0.00 5.73
373 374 4.760047 CGGTGAGGTCAAGGCGGG 62.760 72.222 0.00 0.00 0.00 6.13
377 378 4.410400 GGGGCGGTGAGGTCAAGG 62.410 72.222 0.00 0.00 0.00 3.61
378 379 3.190738 TTGGGGCGGTGAGGTCAAG 62.191 63.158 0.00 0.00 0.00 3.02
379 380 3.172106 TTGGGGCGGTGAGGTCAA 61.172 61.111 0.00 0.00 0.00 3.18
380 381 3.636231 CTTGGGGCGGTGAGGTCA 61.636 66.667 0.00 0.00 0.00 4.02
381 382 2.804828 CTTCTTGGGGCGGTGAGGTC 62.805 65.000 0.00 0.00 0.00 3.85
382 383 2.852075 TTCTTGGGGCGGTGAGGT 60.852 61.111 0.00 0.00 0.00 3.85
383 384 2.045926 CTTCTTGGGGCGGTGAGG 60.046 66.667 0.00 0.00 0.00 3.86
384 385 1.376037 GTCTTCTTGGGGCGGTGAG 60.376 63.158 0.00 0.00 0.00 3.51
385 386 1.701031 TTGTCTTCTTGGGGCGGTGA 61.701 55.000 0.00 0.00 0.00 4.02
386 387 1.228124 TTGTCTTCTTGGGGCGGTG 60.228 57.895 0.00 0.00 0.00 4.94
387 388 1.228154 GTTGTCTTCTTGGGGCGGT 60.228 57.895 0.00 0.00 0.00 5.68
388 389 0.609131 ATGTTGTCTTCTTGGGGCGG 60.609 55.000 0.00 0.00 0.00 6.13
389 390 0.523072 CATGTTGTCTTCTTGGGGCG 59.477 55.000 0.00 0.00 0.00 6.13
390 391 1.909700 TCATGTTGTCTTCTTGGGGC 58.090 50.000 0.00 0.00 0.00 5.80
391 392 4.081406 TGATTCATGTTGTCTTCTTGGGG 58.919 43.478 0.00 0.00 0.00 4.96
392 393 5.464168 GTTGATTCATGTTGTCTTCTTGGG 58.536 41.667 0.00 0.00 0.00 4.12
393 394 5.464168 GGTTGATTCATGTTGTCTTCTTGG 58.536 41.667 0.00 0.00 0.00 3.61
394 395 5.464168 GGGTTGATTCATGTTGTCTTCTTG 58.536 41.667 0.00 0.00 0.00 3.02
395 396 4.216257 CGGGTTGATTCATGTTGTCTTCTT 59.784 41.667 0.00 0.00 0.00 2.52
396 397 3.753272 CGGGTTGATTCATGTTGTCTTCT 59.247 43.478 0.00 0.00 0.00 2.85
397 398 3.119849 CCGGGTTGATTCATGTTGTCTTC 60.120 47.826 0.00 0.00 0.00 2.87
398 399 2.819608 CCGGGTTGATTCATGTTGTCTT 59.180 45.455 0.00 0.00 0.00 3.01
399 400 2.039746 TCCGGGTTGATTCATGTTGTCT 59.960 45.455 0.00 0.00 0.00 3.41
400 401 2.420022 CTCCGGGTTGATTCATGTTGTC 59.580 50.000 0.00 0.00 0.00 3.18
401 402 2.436417 CTCCGGGTTGATTCATGTTGT 58.564 47.619 0.00 0.00 0.00 3.32
402 403 1.133025 GCTCCGGGTTGATTCATGTTG 59.867 52.381 0.00 0.00 0.00 3.33
403 404 1.463674 GCTCCGGGTTGATTCATGTT 58.536 50.000 0.00 0.00 0.00 2.71
404 405 0.394352 GGCTCCGGGTTGATTCATGT 60.394 55.000 0.00 0.00 0.00 3.21
405 406 1.439353 CGGCTCCGGGTTGATTCATG 61.439 60.000 0.00 0.00 35.56 3.07
406 407 1.153168 CGGCTCCGGGTTGATTCAT 60.153 57.895 0.00 0.00 35.56 2.57
407 408 2.267642 CGGCTCCGGGTTGATTCA 59.732 61.111 0.00 0.00 35.56 2.57
423 424 0.666274 ATATATGACCGCACGCACCG 60.666 55.000 0.00 0.00 0.00 4.94
424 425 1.508632 AATATATGACCGCACGCACC 58.491 50.000 0.00 0.00 0.00 5.01
425 426 4.921470 ATAAATATATGACCGCACGCAC 57.079 40.909 0.00 0.00 0.00 5.34
426 427 5.933187 AAATAAATATATGACCGCACGCA 57.067 34.783 0.00 0.00 0.00 5.24
427 428 6.367421 TGAAAATAAATATATGACCGCACGC 58.633 36.000 0.00 0.00 0.00 5.34
428 429 7.533900 CCTTGAAAATAAATATATGACCGCACG 59.466 37.037 0.00 0.00 0.00 5.34
429 430 8.349983 ACCTTGAAAATAAATATATGACCGCAC 58.650 33.333 0.00 0.00 0.00 5.34
430 431 8.458573 ACCTTGAAAATAAATATATGACCGCA 57.541 30.769 0.00 0.00 0.00 5.69
500 501 9.535878 TCCACTTTATTTTTACGAAAAGCATTT 57.464 25.926 0.00 0.00 42.41 2.32
501 502 9.705290 ATCCACTTTATTTTTACGAAAAGCATT 57.295 25.926 0.00 0.00 38.09 3.56
502 503 9.705290 AATCCACTTTATTTTTACGAAAAGCAT 57.295 25.926 0.00 0.00 38.09 3.79
503 504 9.535878 AAATCCACTTTATTTTTACGAAAAGCA 57.464 25.926 0.00 0.00 38.09 3.91
536 537 9.585099 CAACAGGTGCACATAACATAATTTTAT 57.415 29.630 20.43 0.00 0.00 1.40
537 538 8.580720 ACAACAGGTGCACATAACATAATTTTA 58.419 29.630 20.43 0.00 0.00 1.52
538 539 7.441017 ACAACAGGTGCACATAACATAATTTT 58.559 30.769 20.43 0.00 0.00 1.82
539 540 6.991938 ACAACAGGTGCACATAACATAATTT 58.008 32.000 20.43 0.00 0.00 1.82
540 541 6.588719 ACAACAGGTGCACATAACATAATT 57.411 33.333 20.43 0.00 0.00 1.40
541 542 6.588719 AACAACAGGTGCACATAACATAAT 57.411 33.333 20.43 0.00 0.00 1.28
542 543 6.398234 AAACAACAGGTGCACATAACATAA 57.602 33.333 20.43 0.00 0.00 1.90
543 544 6.398234 AAAACAACAGGTGCACATAACATA 57.602 33.333 20.43 0.00 0.00 2.29
544 545 4.935352 AAACAACAGGTGCACATAACAT 57.065 36.364 20.43 0.00 0.00 2.71
545 546 4.440802 GGAAAACAACAGGTGCACATAACA 60.441 41.667 20.43 0.00 0.00 2.41
546 547 4.048504 GGAAAACAACAGGTGCACATAAC 58.951 43.478 20.43 0.19 0.00 1.89
547 548 3.243234 CGGAAAACAACAGGTGCACATAA 60.243 43.478 20.43 0.00 0.00 1.90
548 549 2.292016 CGGAAAACAACAGGTGCACATA 59.708 45.455 20.43 0.00 0.00 2.29
549 550 1.066908 CGGAAAACAACAGGTGCACAT 59.933 47.619 20.43 9.24 0.00 3.21
550 551 0.453793 CGGAAAACAACAGGTGCACA 59.546 50.000 20.43 0.00 0.00 4.57
551 552 0.869880 GCGGAAAACAACAGGTGCAC 60.870 55.000 8.80 8.80 0.00 4.57
552 553 1.435515 GCGGAAAACAACAGGTGCA 59.564 52.632 0.00 0.00 0.00 4.57
553 554 1.657181 CGCGGAAAACAACAGGTGC 60.657 57.895 0.00 0.00 0.00 5.01
554 555 0.099791 AACGCGGAAAACAACAGGTG 59.900 50.000 12.47 0.00 0.00 4.00
555 556 0.812549 AAACGCGGAAAACAACAGGT 59.187 45.000 12.47 0.00 0.00 4.00
556 557 1.849829 GAAAACGCGGAAAACAACAGG 59.150 47.619 12.47 0.00 0.00 4.00
557 558 2.792749 AGAAAACGCGGAAAACAACAG 58.207 42.857 12.47 0.00 0.00 3.16
558 559 2.923605 AGAAAACGCGGAAAACAACA 57.076 40.000 12.47 0.00 0.00 3.33
559 560 5.908499 TGTTATAGAAAACGCGGAAAACAAC 59.092 36.000 12.47 5.48 31.76 3.32
560 561 6.057627 TGTTATAGAAAACGCGGAAAACAA 57.942 33.333 12.47 0.00 31.76 2.83
561 562 5.670149 TGTTATAGAAAACGCGGAAAACA 57.330 34.783 12.47 6.50 31.76 2.83
562 563 7.557036 AAATGTTATAGAAAACGCGGAAAAC 57.443 32.000 12.47 3.88 31.76 2.43
563 564 9.843334 ATAAAATGTTATAGAAAACGCGGAAAA 57.157 25.926 12.47 0.00 31.76 2.29
601 602 4.594970 TCGGGAGCTATTGGATTCAAAAA 58.405 39.130 0.00 0.00 36.36 1.94
602 603 4.229304 TCGGGAGCTATTGGATTCAAAA 57.771 40.909 0.00 0.00 36.36 2.44
603 604 3.924114 TCGGGAGCTATTGGATTCAAA 57.076 42.857 0.00 0.00 36.36 2.69
604 605 3.541632 GTTCGGGAGCTATTGGATTCAA 58.458 45.455 0.00 0.00 37.28 2.69
605 606 2.483013 CGTTCGGGAGCTATTGGATTCA 60.483 50.000 0.00 0.00 0.00 2.57
606 607 2.135933 CGTTCGGGAGCTATTGGATTC 58.864 52.381 0.00 0.00 0.00 2.52
607 608 1.485066 ACGTTCGGGAGCTATTGGATT 59.515 47.619 0.00 0.00 0.00 3.01
608 609 1.120530 ACGTTCGGGAGCTATTGGAT 58.879 50.000 0.00 0.00 0.00 3.41
609 610 0.899720 AACGTTCGGGAGCTATTGGA 59.100 50.000 0.00 0.00 0.00 3.53
610 611 1.287425 GAACGTTCGGGAGCTATTGG 58.713 55.000 13.36 0.00 0.00 3.16
611 612 0.921347 CGAACGTTCGGGAGCTATTG 59.079 55.000 36.53 10.09 46.30 1.90
612 613 3.340727 CGAACGTTCGGGAGCTATT 57.659 52.632 36.53 0.00 46.30 1.73
622 623 2.961522 TGCTCAAAATCCGAACGTTC 57.038 45.000 18.47 18.47 0.00 3.95
623 624 3.915437 AATGCTCAAAATCCGAACGTT 57.085 38.095 0.00 0.00 0.00 3.99
624 625 3.666902 CGAAATGCTCAAAATCCGAACGT 60.667 43.478 0.00 0.00 0.00 3.99
625 626 2.840176 CGAAATGCTCAAAATCCGAACG 59.160 45.455 0.00 0.00 0.00 3.95
626 627 3.821841 ACGAAATGCTCAAAATCCGAAC 58.178 40.909 0.00 0.00 0.00 3.95
627 628 4.472286 GAACGAAATGCTCAAAATCCGAA 58.528 39.130 0.00 0.00 0.00 4.30
628 629 3.119990 GGAACGAAATGCTCAAAATCCGA 60.120 43.478 0.00 0.00 0.00 4.55
629 630 3.171277 GGAACGAAATGCTCAAAATCCG 58.829 45.455 0.00 0.00 0.00 4.18
646 647 2.975193 GGCATGTAAAAACGTTCGGAAC 59.025 45.455 10.83 10.83 0.00 3.62
647 648 2.617308 TGGCATGTAAAAACGTTCGGAA 59.383 40.909 0.00 0.00 0.00 4.30
648 649 2.219458 TGGCATGTAAAAACGTTCGGA 58.781 42.857 0.00 0.00 0.00 4.55
649 650 2.690173 TGGCATGTAAAAACGTTCGG 57.310 45.000 0.00 0.00 0.00 4.30
650 651 3.623863 AGTTGGCATGTAAAAACGTTCG 58.376 40.909 0.00 0.00 0.00 3.95
651 652 5.959652 AAAGTTGGCATGTAAAAACGTTC 57.040 34.783 0.00 0.00 0.00 3.95
652 653 6.566141 ACTAAAGTTGGCATGTAAAAACGTT 58.434 32.000 0.00 0.00 0.00 3.99
653 654 6.139048 ACTAAAGTTGGCATGTAAAAACGT 57.861 33.333 0.00 0.00 0.00 3.99
668 669 4.229582 TGCCATCCCCTATCAACTAAAGTT 59.770 41.667 0.00 0.00 39.12 2.66
669 670 3.785887 TGCCATCCCCTATCAACTAAAGT 59.214 43.478 0.00 0.00 0.00 2.66
670 671 4.437682 TGCCATCCCCTATCAACTAAAG 57.562 45.455 0.00 0.00 0.00 1.85
671 672 4.229582 AGTTGCCATCCCCTATCAACTAAA 59.770 41.667 4.36 0.00 43.60 1.85
672 673 3.785887 AGTTGCCATCCCCTATCAACTAA 59.214 43.478 4.36 0.00 43.60 2.24
673 674 3.393687 AGTTGCCATCCCCTATCAACTA 58.606 45.455 4.36 0.00 43.60 2.24
674 675 2.208872 AGTTGCCATCCCCTATCAACT 58.791 47.619 0.00 0.00 41.50 3.16
675 676 2.736670 AGTTGCCATCCCCTATCAAC 57.263 50.000 0.00 0.00 37.78 3.18
676 677 2.421388 CGAAGTTGCCATCCCCTATCAA 60.421 50.000 0.00 0.00 0.00 2.57
677 678 1.140852 CGAAGTTGCCATCCCCTATCA 59.859 52.381 0.00 0.00 0.00 2.15
678 679 1.141053 ACGAAGTTGCCATCCCCTATC 59.859 52.381 0.00 0.00 37.78 2.08
679 680 1.213296 ACGAAGTTGCCATCCCCTAT 58.787 50.000 0.00 0.00 37.78 2.57
680 681 2.691663 ACGAAGTTGCCATCCCCTA 58.308 52.632 0.00 0.00 37.78 3.53
681 682 3.495729 ACGAAGTTGCCATCCCCT 58.504 55.556 0.00 0.00 37.78 4.79
709 710 8.401709 GGAAACATGGCAATTTTCTAACAAAAA 58.598 29.630 18.32 0.00 32.99 1.94
710 711 7.012799 GGGAAACATGGCAATTTTCTAACAAAA 59.987 33.333 18.32 0.00 31.21 2.44
711 712 6.484977 GGGAAACATGGCAATTTTCTAACAAA 59.515 34.615 18.32 0.00 31.21 2.83
712 713 5.994668 GGGAAACATGGCAATTTTCTAACAA 59.005 36.000 18.32 0.00 31.21 2.83
713 714 5.306678 AGGGAAACATGGCAATTTTCTAACA 59.693 36.000 18.32 0.00 31.21 2.41
714 715 5.793817 AGGGAAACATGGCAATTTTCTAAC 58.206 37.500 18.32 11.83 31.21 2.34
715 716 7.546250 TTAGGGAAACATGGCAATTTTCTAA 57.454 32.000 18.32 15.72 31.21 2.10
716 717 7.619302 AGATTAGGGAAACATGGCAATTTTCTA 59.381 33.333 18.32 12.32 31.21 2.10
717 718 6.441604 AGATTAGGGAAACATGGCAATTTTCT 59.558 34.615 18.32 13.01 31.21 2.52
718 719 6.643388 AGATTAGGGAAACATGGCAATTTTC 58.357 36.000 13.20 13.20 0.00 2.29
719 720 6.213195 TGAGATTAGGGAAACATGGCAATTTT 59.787 34.615 0.00 0.00 0.00 1.82
720 721 5.721000 TGAGATTAGGGAAACATGGCAATTT 59.279 36.000 0.00 0.00 0.00 1.82
721 722 5.127682 GTGAGATTAGGGAAACATGGCAATT 59.872 40.000 0.00 0.00 0.00 2.32
722 723 4.646492 GTGAGATTAGGGAAACATGGCAAT 59.354 41.667 0.00 0.00 0.00 3.56
723 724 4.016444 GTGAGATTAGGGAAACATGGCAA 58.984 43.478 0.00 0.00 0.00 4.52
724 725 3.620488 GTGAGATTAGGGAAACATGGCA 58.380 45.455 0.00 0.00 0.00 4.92
725 726 2.614057 CGTGAGATTAGGGAAACATGGC 59.386 50.000 0.00 0.00 0.00 4.40
726 727 2.614057 GCGTGAGATTAGGGAAACATGG 59.386 50.000 0.00 0.00 0.00 3.66
727 728 3.270027 TGCGTGAGATTAGGGAAACATG 58.730 45.455 0.00 0.00 0.00 3.21
728 729 3.627395 TGCGTGAGATTAGGGAAACAT 57.373 42.857 0.00 0.00 0.00 2.71
729 730 3.410631 TTGCGTGAGATTAGGGAAACA 57.589 42.857 0.00 0.00 0.00 2.83
730 731 3.751698 AGTTTGCGTGAGATTAGGGAAAC 59.248 43.478 6.39 6.39 42.90 2.78
731 732 4.015872 AGTTTGCGTGAGATTAGGGAAA 57.984 40.909 0.00 0.00 0.00 3.13
732 733 3.695830 AGTTTGCGTGAGATTAGGGAA 57.304 42.857 0.00 0.00 0.00 3.97
733 734 4.811969 TTAGTTTGCGTGAGATTAGGGA 57.188 40.909 0.00 0.00 0.00 4.20
734 735 4.935808 AGTTTAGTTTGCGTGAGATTAGGG 59.064 41.667 0.00 0.00 0.00 3.53
735 736 6.073222 ACAAGTTTAGTTTGCGTGAGATTAGG 60.073 38.462 0.00 0.00 0.00 2.69
736 737 6.888430 ACAAGTTTAGTTTGCGTGAGATTAG 58.112 36.000 0.00 0.00 0.00 1.73
737 738 6.480651 TGACAAGTTTAGTTTGCGTGAGATTA 59.519 34.615 0.00 0.00 0.00 1.75
738 739 5.295787 TGACAAGTTTAGTTTGCGTGAGATT 59.704 36.000 0.00 0.00 0.00 2.40
739 740 4.814234 TGACAAGTTTAGTTTGCGTGAGAT 59.186 37.500 0.00 0.00 0.00 2.75
740 741 4.185394 TGACAAGTTTAGTTTGCGTGAGA 58.815 39.130 0.00 0.00 0.00 3.27
741 742 4.530094 TGACAAGTTTAGTTTGCGTGAG 57.470 40.909 0.00 0.00 0.00 3.51
742 743 4.814234 AGATGACAAGTTTAGTTTGCGTGA 59.186 37.500 0.00 0.00 0.00 4.35
743 744 5.095691 AGATGACAAGTTTAGTTTGCGTG 57.904 39.130 0.00 0.00 0.00 5.34
744 745 7.064253 GGTATAGATGACAAGTTTAGTTTGCGT 59.936 37.037 0.00 0.00 0.00 5.24
745 746 7.399523 GGTATAGATGACAAGTTTAGTTTGCG 58.600 38.462 0.00 0.00 0.00 4.85
746 747 7.465513 CGGGTATAGATGACAAGTTTAGTTTGC 60.466 40.741 0.00 0.00 0.00 3.68
747 748 7.548075 ACGGGTATAGATGACAAGTTTAGTTTG 59.452 37.037 0.00 0.00 0.00 2.93
748 749 7.618137 ACGGGTATAGATGACAAGTTTAGTTT 58.382 34.615 0.00 0.00 0.00 2.66
749 750 7.179076 ACGGGTATAGATGACAAGTTTAGTT 57.821 36.000 0.00 0.00 0.00 2.24
750 751 6.786967 ACGGGTATAGATGACAAGTTTAGT 57.213 37.500 0.00 0.00 0.00 2.24
751 752 6.700520 GGAACGGGTATAGATGACAAGTTTAG 59.299 42.308 0.00 0.00 0.00 1.85
752 753 6.576185 GGAACGGGTATAGATGACAAGTTTA 58.424 40.000 0.00 0.00 0.00 2.01
753 754 5.425630 GGAACGGGTATAGATGACAAGTTT 58.574 41.667 0.00 0.00 0.00 2.66
754 755 5.019785 GGAACGGGTATAGATGACAAGTT 57.980 43.478 0.00 0.00 0.00 2.66
755 756 4.667519 GGAACGGGTATAGATGACAAGT 57.332 45.455 0.00 0.00 0.00 3.16
772 773 0.885196 TTAAGCATGGCAACCGGAAC 59.115 50.000 9.46 0.00 0.00 3.62
773 774 0.885196 GTTAAGCATGGCAACCGGAA 59.115 50.000 9.46 0.00 0.00 4.30
774 775 0.037590 AGTTAAGCATGGCAACCGGA 59.962 50.000 9.46 0.00 0.00 5.14
775 776 0.451783 GAGTTAAGCATGGCAACCGG 59.548 55.000 0.00 0.00 0.00 5.28
776 777 0.451783 GGAGTTAAGCATGGCAACCG 59.548 55.000 0.00 0.00 0.00 4.44
777 778 0.817654 GGGAGTTAAGCATGGCAACC 59.182 55.000 0.00 0.00 0.00 3.77
778 779 0.451783 CGGGAGTTAAGCATGGCAAC 59.548 55.000 0.00 0.00 0.00 4.17
779 780 0.326595 TCGGGAGTTAAGCATGGCAA 59.673 50.000 0.00 0.00 0.00 4.52
780 781 0.326595 TTCGGGAGTTAAGCATGGCA 59.673 50.000 0.00 0.00 0.00 4.92
781 782 1.334869 CATTCGGGAGTTAAGCATGGC 59.665 52.381 0.00 0.00 0.00 4.40
782 783 2.643551 ACATTCGGGAGTTAAGCATGG 58.356 47.619 0.00 0.00 0.00 3.66
783 784 3.242413 CGAACATTCGGGAGTTAAGCATG 60.242 47.826 6.11 0.00 46.30 4.06
784 785 2.936498 CGAACATTCGGGAGTTAAGCAT 59.064 45.455 6.11 0.00 46.30 3.79
785 786 2.343101 CGAACATTCGGGAGTTAAGCA 58.657 47.619 6.11 0.00 46.30 3.91
797 798 6.257193 ACCGTAATGATAACTTCCGAACATTC 59.743 38.462 0.00 0.00 31.85 2.67
798 799 6.110707 ACCGTAATGATAACTTCCGAACATT 58.889 36.000 0.00 0.00 33.56 2.71
799 800 5.667466 ACCGTAATGATAACTTCCGAACAT 58.333 37.500 0.00 0.00 0.00 2.71
800 801 5.075858 ACCGTAATGATAACTTCCGAACA 57.924 39.130 0.00 0.00 0.00 3.18
801 802 6.413018 AAACCGTAATGATAACTTCCGAAC 57.587 37.500 0.00 0.00 0.00 3.95
802 803 7.437793 AAAAACCGTAATGATAACTTCCGAA 57.562 32.000 0.00 0.00 0.00 4.30
823 824 9.863845 AGAACGTTTTCTTTTTCATCCTAAAAA 57.136 25.926 0.46 0.00 39.17 1.94
824 825 9.296400 CAGAACGTTTTCTTTTTCATCCTAAAA 57.704 29.630 0.46 0.00 40.34 1.52
825 826 7.918562 CCAGAACGTTTTCTTTTTCATCCTAAA 59.081 33.333 0.46 0.00 40.34 1.85
826 827 7.067737 ACCAGAACGTTTTCTTTTTCATCCTAA 59.932 33.333 0.46 0.00 40.34 2.69
827 828 6.544564 ACCAGAACGTTTTCTTTTTCATCCTA 59.455 34.615 0.46 0.00 40.34 2.94
828 829 5.359860 ACCAGAACGTTTTCTTTTTCATCCT 59.640 36.000 0.46 0.00 40.34 3.24
829 830 5.588240 ACCAGAACGTTTTCTTTTTCATCC 58.412 37.500 0.46 0.00 40.34 3.51
830 831 6.750039 TGAACCAGAACGTTTTCTTTTTCATC 59.250 34.615 0.46 0.00 40.34 2.92
831 832 6.530181 GTGAACCAGAACGTTTTCTTTTTCAT 59.470 34.615 0.46 0.00 40.34 2.57
832 833 5.859648 GTGAACCAGAACGTTTTCTTTTTCA 59.140 36.000 0.46 4.44 40.34 2.69
833 834 5.859648 TGTGAACCAGAACGTTTTCTTTTTC 59.140 36.000 0.46 1.87 40.34 2.29
834 835 5.774630 TGTGAACCAGAACGTTTTCTTTTT 58.225 33.333 0.46 0.00 40.34 1.94
835 836 5.379732 TGTGAACCAGAACGTTTTCTTTT 57.620 34.783 0.46 0.00 40.34 2.27
836 837 4.981794 CTGTGAACCAGAACGTTTTCTTT 58.018 39.130 0.46 0.00 44.49 2.52
837 838 4.616181 CTGTGAACCAGAACGTTTTCTT 57.384 40.909 0.46 0.00 44.49 2.52
848 849 4.320788 GCTCCATTTCTTTCTGTGAACCAG 60.321 45.833 0.00 0.00 42.97 4.00
849 850 3.569701 GCTCCATTTCTTTCTGTGAACCA 59.430 43.478 0.00 0.00 0.00 3.67
850 851 3.057245 GGCTCCATTTCTTTCTGTGAACC 60.057 47.826 0.00 0.00 0.00 3.62
851 852 3.823304 AGGCTCCATTTCTTTCTGTGAAC 59.177 43.478 0.00 0.00 0.00 3.18
852 853 3.822735 CAGGCTCCATTTCTTTCTGTGAA 59.177 43.478 0.00 0.00 0.00 3.18
853 854 3.072915 TCAGGCTCCATTTCTTTCTGTGA 59.927 43.478 0.00 0.00 0.00 3.58
854 855 3.415212 TCAGGCTCCATTTCTTTCTGTG 58.585 45.455 0.00 0.00 0.00 3.66
855 856 3.073650 ACTCAGGCTCCATTTCTTTCTGT 59.926 43.478 0.00 0.00 0.00 3.41
856 857 3.683802 ACTCAGGCTCCATTTCTTTCTG 58.316 45.455 0.00 0.00 0.00 3.02
857 858 4.080638 CCTACTCAGGCTCCATTTCTTTCT 60.081 45.833 0.00 0.00 34.35 2.52
858 859 4.080863 TCCTACTCAGGCTCCATTTCTTTC 60.081 45.833 0.00 0.00 42.30 2.62
859 860 3.846588 TCCTACTCAGGCTCCATTTCTTT 59.153 43.478 0.00 0.00 42.30 2.52
860 861 3.198853 GTCCTACTCAGGCTCCATTTCTT 59.801 47.826 0.00 0.00 42.30 2.52
861 862 2.769095 GTCCTACTCAGGCTCCATTTCT 59.231 50.000 0.00 0.00 42.30 2.52
862 863 2.501723 TGTCCTACTCAGGCTCCATTTC 59.498 50.000 0.00 0.00 42.30 2.17
863 864 2.503356 CTGTCCTACTCAGGCTCCATTT 59.497 50.000 0.00 0.00 42.30 2.32
864 865 2.114616 CTGTCCTACTCAGGCTCCATT 58.885 52.381 0.00 0.00 42.30 3.16
865 866 1.786937 CTGTCCTACTCAGGCTCCAT 58.213 55.000 0.00 0.00 42.30 3.41
866 867 0.972983 GCTGTCCTACTCAGGCTCCA 60.973 60.000 0.00 0.00 42.30 3.86
867 868 1.819905 GCTGTCCTACTCAGGCTCC 59.180 63.158 0.00 0.00 42.30 4.70
871 872 0.757188 ATCGGGCTGTCCTACTCAGG 60.757 60.000 0.00 0.00 44.17 3.86
872 873 0.671251 GATCGGGCTGTCCTACTCAG 59.329 60.000 0.00 0.00 36.18 3.35
873 874 0.259065 AGATCGGGCTGTCCTACTCA 59.741 55.000 0.00 0.00 0.00 3.41
874 875 0.955905 GAGATCGGGCTGTCCTACTC 59.044 60.000 0.00 0.00 0.00 2.59
875 876 0.259065 TGAGATCGGGCTGTCCTACT 59.741 55.000 0.00 0.00 0.00 2.57
876 877 1.333177 ATGAGATCGGGCTGTCCTAC 58.667 55.000 0.00 0.00 0.00 3.18
877 878 2.108425 ACTATGAGATCGGGCTGTCCTA 59.892 50.000 0.00 0.00 0.00 2.94
878 879 1.133325 ACTATGAGATCGGGCTGTCCT 60.133 52.381 0.00 0.00 0.00 3.85
879 880 1.333177 ACTATGAGATCGGGCTGTCC 58.667 55.000 0.00 0.00 0.00 4.02
880 881 2.546795 CCAACTATGAGATCGGGCTGTC 60.547 54.545 0.00 0.00 0.00 3.51
881 882 1.414181 CCAACTATGAGATCGGGCTGT 59.586 52.381 0.00 0.00 0.00 4.40
882 883 1.688735 TCCAACTATGAGATCGGGCTG 59.311 52.381 0.00 0.00 0.00 4.85
883 884 1.967066 CTCCAACTATGAGATCGGGCT 59.033 52.381 0.00 0.00 31.26 5.19
884 885 1.606737 GCTCCAACTATGAGATCGGGC 60.607 57.143 0.00 0.00 31.26 6.13
885 886 1.336332 CGCTCCAACTATGAGATCGGG 60.336 57.143 0.00 0.00 31.26 5.14
886 887 1.336332 CCGCTCCAACTATGAGATCGG 60.336 57.143 0.00 0.00 32.93 4.18
887 888 1.609072 TCCGCTCCAACTATGAGATCG 59.391 52.381 0.00 0.00 31.26 3.69
888 889 2.029470 CCTCCGCTCCAACTATGAGATC 60.029 54.545 0.00 0.00 31.26 2.75
889 890 1.967066 CCTCCGCTCCAACTATGAGAT 59.033 52.381 0.00 0.00 31.26 2.75
890 891 1.063942 TCCTCCGCTCCAACTATGAGA 60.064 52.381 0.00 0.00 31.26 3.27
891 892 1.339610 CTCCTCCGCTCCAACTATGAG 59.660 57.143 0.00 0.00 0.00 2.90
892 893 1.063942 TCTCCTCCGCTCCAACTATGA 60.064 52.381 0.00 0.00 0.00 2.15
893 894 1.067821 GTCTCCTCCGCTCCAACTATG 59.932 57.143 0.00 0.00 0.00 2.23
894 895 1.063567 AGTCTCCTCCGCTCCAACTAT 60.064 52.381 0.00 0.00 0.00 2.12
895 896 0.331954 AGTCTCCTCCGCTCCAACTA 59.668 55.000 0.00 0.00 0.00 2.24
896 897 0.968393 GAGTCTCCTCCGCTCCAACT 60.968 60.000 0.00 0.00 0.00 3.16
897 898 1.251527 TGAGTCTCCTCCGCTCCAAC 61.252 60.000 0.00 0.00 36.86 3.77
898 899 0.541998 TTGAGTCTCCTCCGCTCCAA 60.542 55.000 0.00 0.00 36.86 3.53
899 900 0.541998 TTTGAGTCTCCTCCGCTCCA 60.542 55.000 0.00 0.00 36.86 3.86
900 901 0.827368 ATTTGAGTCTCCTCCGCTCC 59.173 55.000 0.00 0.00 36.86 4.70
901 902 1.202475 GGATTTGAGTCTCCTCCGCTC 60.202 57.143 0.00 0.00 36.86 5.03
902 903 0.827368 GGATTTGAGTCTCCTCCGCT 59.173 55.000 0.00 0.00 36.86 5.52
903 904 0.179070 GGGATTTGAGTCTCCTCCGC 60.179 60.000 0.00 0.00 36.86 5.54
904 905 0.466124 GGGGATTTGAGTCTCCTCCG 59.534 60.000 0.00 0.00 35.76 4.63
905 906 0.840617 GGGGGATTTGAGTCTCCTCC 59.159 60.000 0.15 0.15 44.87 4.30
921 922 4.109675 ATCGAGGCGGTTTGGGGG 62.110 66.667 0.00 0.00 0.00 5.40
922 923 2.513897 GATCGAGGCGGTTTGGGG 60.514 66.667 0.00 0.00 0.00 4.96
923 924 1.521681 GAGATCGAGGCGGTTTGGG 60.522 63.158 0.00 0.00 0.00 4.12
924 925 1.521681 GGAGATCGAGGCGGTTTGG 60.522 63.158 0.00 0.00 0.00 3.28
925 926 1.521681 GGGAGATCGAGGCGGTTTG 60.522 63.158 0.00 0.00 0.00 2.93
926 927 1.677637 GAGGGAGATCGAGGCGGTTT 61.678 60.000 0.00 0.00 0.00 3.27
927 928 2.042843 AGGGAGATCGAGGCGGTT 60.043 61.111 0.00 0.00 0.00 4.44
928 929 2.519780 GAGGGAGATCGAGGCGGT 60.520 66.667 0.00 0.00 0.00 5.68
929 930 3.665226 CGAGGGAGATCGAGGCGG 61.665 72.222 0.00 0.00 45.56 6.13
930 931 3.665226 CCGAGGGAGATCGAGGCG 61.665 72.222 0.00 0.00 45.56 5.52
931 932 3.984749 GCCGAGGGAGATCGAGGC 61.985 72.222 0.00 0.00 45.56 4.70
932 933 2.203422 AGCCGAGGGAGATCGAGG 60.203 66.667 0.00 0.00 45.56 4.63
933 934 2.612567 CGAGCCGAGGGAGATCGAG 61.613 68.421 0.00 0.00 45.56 4.04
934 935 2.592001 CGAGCCGAGGGAGATCGA 60.592 66.667 0.00 0.00 45.56 3.59
935 936 1.519751 ATTCGAGCCGAGGGAGATCG 61.520 60.000 0.00 0.00 42.36 3.69
936 937 0.242555 GATTCGAGCCGAGGGAGATC 59.757 60.000 0.00 0.00 37.14 2.75
937 938 1.182385 GGATTCGAGCCGAGGGAGAT 61.182 60.000 0.00 0.00 37.14 2.75
938 939 1.828660 GGATTCGAGCCGAGGGAGA 60.829 63.158 0.00 0.00 37.14 3.71
939 940 2.731374 GGATTCGAGCCGAGGGAG 59.269 66.667 0.00 0.00 37.14 4.30
993 1000 4.602259 TTCGGATCCATCGGCGGC 62.602 66.667 13.41 0.00 0.00 6.53
1028 1041 1.359459 CCTTAAGCGGTCGAACAGCC 61.359 60.000 12.53 0.00 40.20 4.85
1058 1073 1.300697 GACGTCGAGGTTGTTGGCT 60.301 57.895 12.67 0.00 0.00 4.75
1174 1390 6.037098 CGGTGAAGATCCAACTAGAACTAAG 58.963 44.000 0.00 0.00 0.00 2.18
1183 1399 0.324943 CCACCGGTGAAGATCCAACT 59.675 55.000 36.07 0.00 0.00 3.16
1192 1408 2.592287 GGCGAAACCACCGGTGAA 60.592 61.111 36.07 0.00 35.34 3.18
1193 1409 4.973055 CGGCGAAACCACCGGTGA 62.973 66.667 36.07 0.00 45.74 4.02
1222 1450 4.379082 GCGTTAACATTTCCGAAGACCAAT 60.379 41.667 6.39 0.00 0.00 3.16
1224 1452 2.481185 GCGTTAACATTTCCGAAGACCA 59.519 45.455 6.39 0.00 0.00 4.02
1226 1454 2.159612 GGGCGTTAACATTTCCGAAGAC 60.160 50.000 6.39 0.00 0.00 3.01
1393 1624 0.033781 CCCTCCGTGTGGTAAAACGA 59.966 55.000 0.00 0.00 42.32 3.85
1437 1668 2.294233 CTGAAAACTGATGTGTGGGTGG 59.706 50.000 0.00 0.00 0.00 4.61
1612 1844 2.949177 AACACATGGCAACTCAGGTA 57.051 45.000 0.00 0.00 30.04 3.08
1786 2018 5.222631 CAGTTGCCATGTAAAAAGGAAGAC 58.777 41.667 0.00 0.00 0.00 3.01
2290 2522 2.031683 CACGTCAACTCACCAAAAGACC 59.968 50.000 0.00 0.00 0.00 3.85
2291 2523 2.676342 ACACGTCAACTCACCAAAAGAC 59.324 45.455 0.00 0.00 0.00 3.01
2296 2528 2.159028 TCATCACACGTCAACTCACCAA 60.159 45.455 0.00 0.00 0.00 3.67
2303 2535 2.096218 GGAAGCTTCATCACACGTCAAC 60.096 50.000 27.02 1.94 0.00 3.18
2309 2541 2.777832 AGGAGGAAGCTTCATCACAC 57.222 50.000 34.41 21.26 39.58 3.82
2312 2544 3.256631 GCAAAAAGGAGGAAGCTTCATCA 59.743 43.478 34.41 0.00 39.58 3.07
2313 2545 3.256631 TGCAAAAAGGAGGAAGCTTCATC 59.743 43.478 28.51 28.51 37.27 2.92
2314 2546 3.233507 TGCAAAAAGGAGGAAGCTTCAT 58.766 40.909 27.02 21.50 0.00 2.57
2467 2700 4.389992 ACAGACAGAAAGCATCATACAACG 59.610 41.667 0.00 0.00 0.00 4.10
2472 2705 5.151297 TCACACAGACAGAAAGCATCATA 57.849 39.130 0.00 0.00 0.00 2.15
2502 2751 6.986424 GTAACCAACCAAGAAAAATTCTCG 57.014 37.500 0.00 0.00 39.61 4.04
2669 2991 6.650807 ACAATCAAACACGACTACAATCTCAT 59.349 34.615 0.00 0.00 0.00 2.90
2706 3028 0.108585 AACGGTGCTGAACTGGTCAT 59.891 50.000 0.00 0.00 39.74 3.06
2707 3029 0.813610 CAACGGTGCTGAACTGGTCA 60.814 55.000 0.00 0.00 39.74 4.02
2711 3033 3.825812 GTTCAACGGTGCTGAACTG 57.174 52.632 15.18 0.00 46.01 3.16
2752 3094 4.464008 ACAGAAAGACCACACATGAATGT 58.536 39.130 0.00 0.00 42.84 2.71
2753 3095 6.017192 TGTTACAGAAAGACCACACATGAATG 60.017 38.462 0.00 0.00 0.00 2.67
2789 3134 3.003897 AGCTAGCTACATCGAGCAACTAC 59.996 47.826 17.69 0.00 45.43 2.73
2834 3179 0.796312 AAATCAGCGTTAGGTGTGCG 59.204 50.000 0.00 0.00 45.42 5.34
2839 3184 3.634910 ACCAAAACAAATCAGCGTTAGGT 59.365 39.130 0.00 0.00 32.13 3.08
2846 3191 3.391965 TGCATGACCAAAACAAATCAGC 58.608 40.909 0.00 0.00 0.00 4.26
3023 3388 1.901833 TGCAGCATCAGAGGTCAAGTA 59.098 47.619 0.00 0.00 0.00 2.24
3074 3441 7.940688 TGCAACATAATGATATCTGAATGACCT 59.059 33.333 14.60 1.99 0.00 3.85
3109 3476 3.602491 GCGACAGCATATGAACGATCAAC 60.602 47.826 6.97 0.00 44.35 3.18
3186 3558 8.157476 ACACTAGAGACACACATTTTCCTTTAT 58.843 33.333 0.00 0.00 0.00 1.40
3187 3559 7.506114 ACACTAGAGACACACATTTTCCTTTA 58.494 34.615 0.00 0.00 0.00 1.85
3206 3580 4.357918 AATAGCTGGGCCATAACACTAG 57.642 45.455 6.72 0.00 0.00 2.57
3254 3629 3.072184 AGTGGCTGCTCTATTAAGGATGG 59.928 47.826 0.00 0.00 0.00 3.51
3255 3630 4.348863 AGTGGCTGCTCTATTAAGGATG 57.651 45.455 0.00 0.00 0.00 3.51
3297 3676 1.338020 GCCTGCTCATAAATTTCCCCG 59.662 52.381 0.00 0.00 0.00 5.73
3422 3804 9.944376 ATAGACAGAGAAAATAACTGCAAAGTA 57.056 29.630 0.00 0.00 35.38 2.24
3434 3816 7.281774 CCTACACAATGCATAGACAGAGAAAAT 59.718 37.037 0.00 0.00 0.00 1.82
3474 3856 4.168101 AGGAGAACAGGGAACAATACTCA 58.832 43.478 0.00 0.00 0.00 3.41
3476 3859 4.597507 TGAAGGAGAACAGGGAACAATACT 59.402 41.667 0.00 0.00 0.00 2.12
3611 4085 4.278419 ACCCAAAAACTCATGCAAGACTAC 59.722 41.667 0.00 0.00 0.00 2.73
3637 4111 4.161333 GCACAACATAACTCATGCAAGAC 58.839 43.478 0.00 0.00 38.29 3.01
3681 4156 4.712829 TGACCCTGTTCCATATTCGACTAA 59.287 41.667 0.00 0.00 0.00 2.24
3704 4179 7.452562 ACTTGCAAACATAAATTCCCAAATCT 58.547 30.769 0.00 0.00 0.00 2.40
3707 4182 5.694006 CGACTTGCAAACATAAATTCCCAAA 59.306 36.000 0.00 0.00 0.00 3.28
3873 4350 8.958119 TGGACTTGATAAACCAGACATATAAC 57.042 34.615 0.00 0.00 0.00 1.89
3916 4393 6.405278 AAAATAACCTTCAACAAGTCCAGG 57.595 37.500 0.00 0.00 0.00 4.45
3949 4426 5.973899 TTACAAGCAGCAAATCCAACATA 57.026 34.783 0.00 0.00 0.00 2.29
4157 4655 2.428890 CTCCATAAAGGACTGCTCGAGT 59.571 50.000 15.13 0.00 43.07 4.18
4253 4751 1.743394 CTTTACATTTGCCTCCGGACC 59.257 52.381 0.00 0.00 0.00 4.46
4462 4960 2.236146 TCTGTCCATTACCAAGCGTGAT 59.764 45.455 0.00 0.00 0.00 3.06
4627 5125 6.317391 TCATATACTATCTGATCTGTCTGCCG 59.683 42.308 0.00 0.00 0.00 5.69
4686 5184 3.964688 TGTCTGAACTGAGGTTTACAGGA 59.035 43.478 0.00 0.00 39.38 3.86
4710 5208 0.250166 TCCATCGGATCTCGTCGCTA 60.250 55.000 0.00 0.00 40.32 4.26
4782 5280 1.001633 GTGGAGGTAAGGTTCGCTTGA 59.998 52.381 0.00 0.00 0.00 3.02
4913 5413 4.558226 ACTGACAGAAGTATGCATTGGA 57.442 40.909 10.08 0.00 0.00 3.53
4980 5480 3.324556 CCAAATTGTGATGGTGAAAGGGT 59.675 43.478 0.00 0.00 31.84 4.34
5080 5580 1.212688 CCCTCCACAATGCTCATGGTA 59.787 52.381 0.00 0.00 34.89 3.25
5082 5582 1.389609 GCCCTCCACAATGCTCATGG 61.390 60.000 0.00 0.00 34.58 3.66
5234 5734 2.039480 GCCTCCATAGATCAATGCCTCA 59.961 50.000 0.00 0.00 0.00 3.86
5300 5800 2.092699 GCTCAACTCAGCCTATCCCTTT 60.093 50.000 0.00 0.00 32.76 3.11
5475 6020 1.130749 CAGAGACCGACTTACCTGACG 59.869 57.143 0.00 0.00 0.00 4.35
5476 6021 2.161030 ACAGAGACCGACTTACCTGAC 58.839 52.381 0.00 0.00 0.00 3.51
5477 6022 2.040012 AGACAGAGACCGACTTACCTGA 59.960 50.000 0.00 0.00 0.00 3.86
5478 6023 2.420722 GAGACAGAGACCGACTTACCTG 59.579 54.545 0.00 0.00 0.00 4.00
5723 6271 4.479158 ACTTTACAACCCATGGTCACAAT 58.521 39.130 11.73 0.00 33.12 2.71
5724 6272 3.904717 ACTTTACAACCCATGGTCACAA 58.095 40.909 11.73 0.00 33.12 3.33
5727 6275 4.020039 ACGATACTTTACAACCCATGGTCA 60.020 41.667 11.73 0.00 33.12 4.02
5728 6276 4.510571 ACGATACTTTACAACCCATGGTC 58.489 43.478 11.73 0.00 33.12 4.02
5729 6277 4.510571 GACGATACTTTACAACCCATGGT 58.489 43.478 11.73 0.00 37.65 3.55
5732 6280 4.178540 CACGACGATACTTTACAACCCAT 58.821 43.478 0.00 0.00 0.00 4.00
5797 6350 0.319555 TCGCCTTCTGGAACAAGACG 60.320 55.000 0.00 0.00 38.70 4.18
5923 6482 5.711976 GGGAAATTCAGTCCAAAGATGAAGA 59.288 40.000 0.00 0.00 36.47 2.87
5924 6483 5.477984 TGGGAAATTCAGTCCAAAGATGAAG 59.522 40.000 0.00 0.00 36.47 3.02
5925 6484 5.392995 TGGGAAATTCAGTCCAAAGATGAA 58.607 37.500 0.00 0.00 36.83 2.57
5974 6541 6.940739 ACAAAATAGTAGAGCTGAGTCACAT 58.059 36.000 0.00 0.00 0.00 3.21
6142 6711 2.284921 CAGTGGCAGAGGGAGGGA 60.285 66.667 0.00 0.00 0.00 4.20
6143 6712 4.106925 GCAGTGGCAGAGGGAGGG 62.107 72.222 0.00 0.00 40.72 4.30
6155 6724 3.726517 CTTTGCCCGTCCGCAGTG 61.727 66.667 0.00 0.00 40.53 3.66
6156 6725 4.250305 ACTTTGCCCGTCCGCAGT 62.250 61.111 0.00 0.00 40.53 4.40
6160 6729 3.110178 GTCGACTTTGCCCGTCCG 61.110 66.667 8.70 0.00 0.00 4.79
6161 6730 3.110178 CGTCGACTTTGCCCGTCC 61.110 66.667 14.70 0.00 0.00 4.79
6171 6761 1.299926 GATATTGCCGCCGTCGACT 60.300 57.895 14.70 0.00 38.10 4.18
6445 7121 2.286294 CGTGCAATCTGCCTTCATCTAC 59.714 50.000 0.00 0.00 44.23 2.59
6458 7134 6.032042 CGTCCTAAAATTTTACACGTGCAATC 59.968 38.462 17.22 0.00 0.00 2.67
6460 7136 5.007430 TCGTCCTAAAATTTTACACGTGCAA 59.993 36.000 23.95 6.21 31.06 4.08
6586 7278 6.173339 AGTAAACAAGGATGTGAGGTGTATG 58.827 40.000 0.00 0.00 40.46 2.39
6594 7286 8.458573 AAATGTACAAGTAAACAAGGATGTGA 57.541 30.769 0.00 0.00 40.46 3.58
6631 7323 7.453980 AGTCGAAAATTCCGGTTTTAAAAAC 57.546 32.000 5.87 5.87 31.80 2.43
6637 7329 5.652518 TCAAAAGTCGAAAATTCCGGTTTT 58.347 33.333 0.00 1.11 34.19 2.43
6698 7481 9.665719 TGCAAACATGTATATCTCTGTAAAGAA 57.334 29.630 0.00 0.00 0.00 2.52
6699 7482 9.317936 CTGCAAACATGTATATCTCTGTAAAGA 57.682 33.333 0.00 0.00 0.00 2.52
6700 7483 8.066595 GCTGCAAACATGTATATCTCTGTAAAG 58.933 37.037 0.00 0.00 0.00 1.85
6701 7484 7.552330 TGCTGCAAACATGTATATCTCTGTAAA 59.448 33.333 0.00 0.00 0.00 2.01
6702 7485 7.047271 TGCTGCAAACATGTATATCTCTGTAA 58.953 34.615 0.00 0.00 0.00 2.41
6751 7534 7.584122 TCTTATACCTCCTTGTAGATCACAC 57.416 40.000 0.00 0.00 36.69 3.82
6783 7847 9.474313 TTCTGCTTTTACATTTGGTATAATCCT 57.526 29.630 0.00 0.00 0.00 3.24
6824 7891 9.453572 ACATGTGATCTATGATTGTTTTGTAGT 57.546 29.630 14.71 0.00 0.00 2.73
6883 7950 2.664402 ATCACCCTCAAGTTGTTGCT 57.336 45.000 2.11 0.00 33.23 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.